AMK01_RS20300 4cf8702b4d259b7bbf7500ea0ca435ce 214 PANTHER PTHR36917 54 204 1.9E-41 T 14-09-2016 AMK01_RS20300 4cf8702b4d259b7bbf7500ea0ca435ce 214 Pfam PF04279 Intracellular septation protein A 19 205 9.9E-56 T 14-09-2016 IPR006008 Intracellular septation protein A GO:0016021 AMK01_RS20300 4cf8702b4d259b7bbf7500ea0ca435ce 214 PANTHER PTHR36917:SF1 54 204 1.9E-41 T 14-09-2016 AMK01_RS20300 4cf8702b4d259b7bbf7500ea0ca435ce 214 PANTHER PTHR36917 16 38 1.9E-41 T 14-09-2016 AMK01_RS20300 4cf8702b4d259b7bbf7500ea0ca435ce 214 PANTHER PTHR36917:SF1 16 38 1.9E-41 T 14-09-2016 AMK01_RS20300 4cf8702b4d259b7bbf7500ea0ca435ce 214 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 19 208 17.573 T 14-09-2016 IPR006008 Intracellular septation protein A GO:0016021 AMK01_RS11300 209ab6ce97b9af5f0d2fe359628e1d00 262 Gene3D G3DSA:1.20.1540.10 32 244 9.0E-31 T 14-09-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMK01_RS11300 209ab6ce97b9af5f0d2fe359628e1d00 262 PANTHER PTHR22936 185 247 1.2E-19 T 14-09-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 AMK01_RS11300 209ab6ce97b9af5f0d2fe359628e1d00 262 PANTHER PTHR22936 84 162 1.2E-19 T 14-09-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 AMK01_RS11300 209ab6ce97b9af5f0d2fe359628e1d00 262 SUPERFAMILY SSF144091 27 248 1.44E-32 T 14-09-2016 AMK01_RS11300 209ab6ce97b9af5f0d2fe359628e1d00 262 Pfam PF01694 Rhomboid family 84 244 8.6E-29 T 14-09-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 641 659 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 434 452 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Gene3D G3DSA:2.60.40.60 835 915 5.0E-8 T 14-09-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 271 289 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Gene3D G3DSA:2.60.40.60 735 819 8.7E-13 T 14-09-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SUPERFAMILY SSF51120 415 493 1.96E-17 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 PANTHER PTHR24027:SF248 727 901 1.2E-19 T 14-09-2016 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 94 112 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 452 470 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Gene3D G3DSA:2.150.10.10 231 363 1.1E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Gene3D G3DSA:2.150.10.10 591 711 2.2E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Gene3D G3DSA:2.150.10.10 412 493 1.6E-18 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Gene3D G3DSA:2.150.10.10 136 170 1.1E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Gene3D G3DSA:2.150.10.10 505 539 2.2E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SUPERFAMILY SSF51120 505 542 3.56E-16 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SUPERFAMILY SSF51120 593 701 3.56E-16 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 PANTHER PTHR24027 727 901 1.2E-19 T 14-09-2016 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 97 114 0.0028 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 137 145 52.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 653 669 0.52 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 80 96 0.01 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 474 490 0.0054 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 78 0.098 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 419 436 0.68 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 438 454 0.0085 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 266 282 0.26 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 619 634 1.6 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 160 169 40.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 455 472 0.039 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 636 652 0.051 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 283 299 0.12 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SUPERFAMILY SSF51120 233 338 3.31E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SUPERFAMILY SSF51120 135 183 3.31E-15 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 PRINTS PR00313 NodO calcium binding signature 293 302 5.6E-9 T 14-09-2016 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 PRINTS PR00313 NodO calcium binding signature 138 146 5.6E-9 T 14-09-2016 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 PRINTS PR00313 NodO calcium binding signature 95 106 5.6E-9 T 14-09-2016 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 PRINTS PR00313 NodO calcium binding signature 284 292 5.6E-9 T 14-09-2016 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SMART SM00112 850 923 0.1 T 14-09-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SMART SM00112 751 823 5.1E-9 T 14-09-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 443 461 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 650 668 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SUPERFAMILY SSF49313 832 915 1.86E-7 T 14-09-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 280 298 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 470 488 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SUPERFAMILY SSF51120 43 175 7.85E-16 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 SUPERFAMILY SSF49313 736 818 7.85E-11 T 14-09-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 AMK01_RS13180 07bdcaf1eb1893cb76cc62e9edc4092a 932 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 76 94 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-09-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 SMART SM00917 379 524 1.3E-34 T 14-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 202 215 - T 14-09-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 5 528 1.8E-178 T 14-09-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 PANTHER PTHR10277:SF5 1 532 3.1E-234 T 14-09-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 SUPERFAMILY SSF110921 421 520 7.85E-18 T 14-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 Gene3D G3DSA:3.20.20.70 1 352 1.3E-115 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 Pfam PF00682 HMGL-like 4 272 2.5E-48 T 14-09-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 SUPERFAMILY SSF51569 1 297 3.85E-77 T 14-09-2016 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 PANTHER PTHR10277 1 532 3.1E-234 T 14-09-2016 AMK01_RS07265 50ede19801927d4ee9e20f24c1ae965e 537 Pfam PF08502 LeuA allosteric (dimerisation) domain 379 521 3.8E-25 T 14-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS17635 a36fa47b28839dc75bd1403c7abeced4 340 Gene3D G3DSA:3.40.190.10 131 265 1.5E-16 T 14-09-2016 AMK01_RS17635 a36fa47b28839dc75bd1403c7abeced4 340 Pfam PF13416 Bacterial extracellular solute-binding protein 44 300 1.3E-27 T 14-09-2016 AMK01_RS17635 a36fa47b28839dc75bd1403c7abeced4 340 SUPERFAMILY SSF53850 27 336 1.44E-57 T 14-09-2016 AMK01_RS17635 a36fa47b28839dc75bd1403c7abeced4 340 PANTHER PTHR30006 4 339 4.4E-37 T 14-09-2016 AMK01_RS17635 a36fa47b28839dc75bd1403c7abeced4 340 Gene3D G3DSA:3.40.190.10 1 126 6.0E-22 T 14-09-2016 AMK01_RS17635 a36fa47b28839dc75bd1403c7abeced4 340 Gene3D G3DSA:3.40.190.10 266 309 6.0E-22 T 14-09-2016 AMK01_RS17730 98158ec237e0a494af7398a68d179ddc 220 Gene3D G3DSA:3.90.420.10 34 218 6.2E-55 T 14-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK01_RS17730 98158ec237e0a494af7398a68d179ddc 220 SUPERFAMILY SSF56524 31 219 1.31E-61 T 14-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK01_RS17730 98158ec237e0a494af7398a68d179ddc 220 PANTHER PTHR19372 37 220 1.2E-67 T 14-09-2016 AMK01_RS17730 98158ec237e0a494af7398a68d179ddc 220 Pfam PF00174 Oxidoreductase molybdopterin binding domain 56 200 2.2E-35 T 14-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK01_RS19255 d64e3d49ebf3fce52505b996200dd1f4 376 PANTHER PTHR37958:SF1 14 376 4.7E-81 T 14-09-2016 AMK01_RS19255 d64e3d49ebf3fce52505b996200dd1f4 376 PANTHER PTHR37958 14 376 4.7E-81 T 14-09-2016 AMK01_RS19255 d64e3d49ebf3fce52505b996200dd1f4 376 Pfam PF01699 Sodium/calcium exchanger protein 48 201 7.3E-19 T 14-09-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 AMK01_RS19255 d64e3d49ebf3fce52505b996200dd1f4 376 Pfam PF01699 Sodium/calcium exchanger protein 234 373 2.4E-12 T 14-09-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 AMK01_RS11660 23a744131d6a11e7fa8fa7609f381e0c 184 Pfam PF06821 Serine hydrolase 8 176 5.6E-69 T 14-09-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMK01_RS11660 23a744131d6a11e7fa8fa7609f381e0c 184 Gene3D G3DSA:3.40.50.1820 6 181 1.6E-46 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS11660 23a744131d6a11e7fa8fa7609f381e0c 184 SUPERFAMILY SSF53474 8 179 3.73E-33 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS13215 4a7589635ce79e0a7169de8e4679d084 170 Pfam PF07886 BA14K-like protein 141 170 2.3E-13 T 14-09-2016 IPR012413 BA14k family GO:0009405 AMK01_RS10385 f060368a471263b07640856a229a9600 287 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 283 1.0E-13 T 14-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMK01_RS10385 f060368a471263b07640856a229a9600 287 PANTHER PTHR11405 1 284 1.8E-30 T 14-09-2016 AMK01_RS10385 f060368a471263b07640856a229a9600 287 Gene3D G3DSA:3.40.50.1370 2 138 1.7E-23 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS10385 f060368a471263b07640856a229a9600 287 Gene3D G3DSA:3.40.50.1370 139 264 1.6E-18 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS10385 f060368a471263b07640856a229a9600 287 PANTHER PTHR11405:SF1 1 284 1.8E-30 T 14-09-2016 AMK01_RS10385 f060368a471263b07640856a229a9600 287 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 140 2.3E-20 T 14-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMK01_RS10385 f060368a471263b07640856a229a9600 287 SUPERFAMILY SSF53671 2 285 2.1E-47 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 SUPERFAMILY SSF51445 28 354 1.33E-81 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 Gene3D G3DSA:3.20.20.80 35 354 2.1E-78 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 SMART SM00633 74 354 1.2E-37 T 14-09-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 PRINTS PR00134 Glycosyl hydrolase family 10 signature 192 203 2.8E-7 T 14-09-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 PRINTS PR00134 Glycosyl hydrolase family 10 signature 147 158 2.8E-7 T 14-09-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 PRINTS PR00134 Glycosyl hydrolase family 10 signature 225 237 2.8E-7 T 14-09-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 PRINTS PR00134 Glycosyl hydrolase family 10 signature 105 117 2.8E-7 T 14-09-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 Pfam PF00331 Glycosyl hydrolase family 10 38 350 1.3E-67 T 14-09-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784|UniPathway: UPA00114 AMK01_RS16575 fa62d819cc72b73f66c4e4c11a7fae62 357 PANTHER PTHR31490 28 316 3.5E-70 T 14-09-2016 AMK01_RS17900 717ff3ee02dc66fb48479b471c6a00b2 274 SUPERFAMILY SSF53448 7 256 3.56E-42 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS17900 717ff3ee02dc66fb48479b471c6a00b2 274 Gene3D G3DSA:3.90.550.10 6 257 1.5E-65 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS17900 717ff3ee02dc66fb48479b471c6a00b2 274 Pfam PF01501 Glycosyl transferase family 8 10 237 3.8E-14 T 14-09-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 AMK01_RS17900 717ff3ee02dc66fb48479b471c6a00b2 274 PANTHER PTHR11183 89 264 2.9E-57 T 14-09-2016 AMK01_RS17900 717ff3ee02dc66fb48479b471c6a00b2 274 PANTHER PTHR11183 7 68 2.9E-57 T 14-09-2016 AMK01_RS20115 e39b3d1416561b5f9d03e3d431c48d8f 96 PANTHER PTHR33219:SF5 1 95 2.4E-17 T 14-09-2016 AMK01_RS20115 e39b3d1416561b5f9d03e3d431c48d8f 96 Pfam PF02325 YGGT family 10 87 5.4E-22 T 14-09-2016 IPR003425 CCB3/YggT GO:0016020 AMK01_RS20115 e39b3d1416561b5f9d03e3d431c48d8f 96 PANTHER PTHR33219 1 95 2.4E-17 T 14-09-2016 AMK01_RS04410 abe85290e8a506589765fd662a27b8a5 75 PANTHER PTHR10031 4 75 4.6E-21 T 14-09-2016 AMK01_RS04410 abe85290e8a506589765fd662a27b8a5 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 74 13.17 T 14-09-2016 AMK01_RS04410 abe85290e8a506589765fd662a27b8a5 75 Pfam PF00137 ATP synthase subunit C 9 71 1.7E-12 T 14-09-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK01_RS04410 abe85290e8a506589765fd662a27b8a5 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 5.4E-24 T 14-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK01_RS04410 abe85290e8a506589765fd662a27b8a5 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 5.4E-24 T 14-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK01_RS04410 abe85290e8a506589765fd662a27b8a5 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 5.4E-24 T 14-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK01_RS04410 abe85290e8a506589765fd662a27b8a5 75 Gene3D G3DSA:1.20.20.10 6 73 2.7E-19 T 14-09-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK01_RS04410 abe85290e8a506589765fd662a27b8a5 75 SUPERFAMILY SSF81333 5 74 1.44E-16 T 14-09-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 14 145 7.7E-45 T 14-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00097 Anthranilate synthase component II signature 364 377 2.5E-6 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00097 Anthranilate synthase component II signature 250 259 2.5E-6 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00097 Anthranilate synthase component II signature 279 290 2.5E-6 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PANTHER PTHR11405 204 393 3.4E-186 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PANTHER PTHR11405 12 185 3.4E-186 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 250 259 7.3E-12 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 279 290 7.3E-12 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 364 377 7.3E-12 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 14 390 2.0E-126 T 14-09-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 296 313 3.3E-36 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 247 261 3.3E-36 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 208 222 3.3E-36 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 295 3.3E-36 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 321 332 3.3E-36 T 14-09-2016 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 Gene3D G3DSA:3.50.30.20 14 159 4.4E-52 T 14-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 SUPERFAMILY SSF52021 13 159 2.62E-49 T 14-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 SMART SM01097 12 146 5.0E-75 T 14-09-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 Gene3D G3DSA:3.40.50.880 169 391 2.0E-75 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 12 393 45.428 T 14-09-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 SUPERFAMILY SSF52317 191 392 1.68E-60 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS15130 c6fc4b682b30367d1b4e6fc40bf4f9b9 401 Pfam PF00117 Glutamine amidotransferase class-I 211 387 7.8E-46 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 7.4E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 7.4E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 7.4E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PANTHER PTHR24322 15 143 6.6E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PANTHER PTHR24322 159 191 6.6E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 Pfam PF00106 short chain dehydrogenase 12 199 6.9E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 SUPERFAMILY SSF51735 9 262 2.45E-59 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 Gene3D G3DSA:3.40.50.720 12 232 5.6E-56 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.1E-21 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.1E-21 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.1E-21 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.1E-21 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08980 0f2dc29554c304645513a71f19448846 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.1E-21 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 559 1.1E-213 T 14-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 Pfam PF00005 ABC transporter 351 498 9.2E-26 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 SUPERFAMILY SSF90123 15 323 3.53E-45 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 SUPERFAMILY SSF52540 327 559 1.88E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 Gene3D G3DSA:1.20.1560.10 14 318 9.3E-41 T 14-09-2016 AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 PANTHER PTHR24222:SF0 15 587 2.2E-223 T 14-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 SMART SM00382 359 546 7.7E-6 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 Gene3D G3DSA:3.40.50.300 345 563 7.3E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 PANTHER PTHR24222 15 587 2.2E-223 T 14-09-2016 AMK01_RS16655 7adb48eeaaad78e0a9746063f477f781 587 Pfam PF00664 ABC transporter transmembrane region 23 281 1.7E-18 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 SUPERFAMILY SSF53328 86 282 2.88E-60 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 Gene3D G3DSA:3.40.50.170 86 282 6.6E-55 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 1.4E-51 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 1.4E-51 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.4E-51 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 255 280 1.4E-51 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.4E-51 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 233 255 1.4E-51 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PANTHER PTHR10520 4 275 4.6E-141 T 14-09-2016 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 SUPERFAMILY SSF55021 3 82 3.58E-16 T 14-09-2016 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PIRSF PIRSF036480 1 282 4.0E-113 T 14-09-2016 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 Pfam PF00551 Formyl transferase 86 263 3.7E-38 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 281 4.4E-101 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 281 47.499 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 PANTHER PTHR10520:SF7 4 275 4.6E-141 T 14-09-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 AMK01_RS01270 57f89842aa2ea2c7b41ea53001edacec 294 Gene3D G3DSA:3.30.70.260 1 81 6.9E-23 T 14-09-2016 AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 Gene3D G3DSA:1.10.260.40 9 59 3.6E-18 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 54 1.3E-9 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 SUPERFAMILY SSF53822 68 334 5.97E-50 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 Pfam PF13377 Periplasmic binding protein-like domain 169 331 6.7E-26 T 14-09-2016 AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 SUPERFAMILY SSF47413 9 65 2.06E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 Gene3D G3DSA:3.40.50.2300 173 306 4.9E-32 T 14-09-2016 AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 Gene3D G3DSA:3.40.50.2300 60 172 2.2E-34 T 14-09-2016 AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 SMART SM00354 7 77 2.1E-17 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS17630 91236bb32d6a82e3278a79557ed05346 347 PANTHER PTHR30146 8 334 2.8E-71 T 14-09-2016 AMK01_RS17435 c63ea94a3762e0143f16eb8ddd4694e4 340 SUPERFAMILY SSF53448 43 136 1.35E-5 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS17435 c63ea94a3762e0143f16eb8ddd4694e4 340 Pfam PF13704 Glycosyl transferase family 2 48 136 1.9E-27 T 14-09-2016 AMK01_RS12180 6e31de842a1fcdb67a592adb97506b8e 355 Gene3D G3DSA:3.30.70.270 177 345 2.4E-50 T 14-09-2016 AMK01_RS12180 6e31de842a1fcdb67a592adb97506b8e 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 173 337 1.7E-42 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS12180 6e31de842a1fcdb67a592adb97506b8e 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 176 333 4.9E-43 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS12180 6e31de842a1fcdb67a592adb97506b8e 355 SUPERFAMILY SSF55073 181 340 1.57E-42 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS12180 6e31de842a1fcdb67a592adb97506b8e 355 PANTHER PTHR10799 208 339 1.7E-30 T 14-09-2016 AMK01_RS12180 6e31de842a1fcdb67a592adb97506b8e 355 PANTHER PTHR10799:SF750 208 339 1.7E-30 T 14-09-2016 AMK01_RS12180 6e31de842a1fcdb67a592adb97506b8e 355 SMART SM00267 165 338 6.9E-55 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS13295 026048e66ffb56e73abc278535d61e0b 279 Gene3D G3DSA:3.40.50.720 2 210 1.2E-33 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13295 026048e66ffb56e73abc278535d61e0b 279 SUPERFAMILY SSF51735 4 271 1.01E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13295 026048e66ffb56e73abc278535d61e0b 279 PANTHER PTHR14194 5 275 1.2E-57 T 14-09-2016 AMK01_RS13295 026048e66ffb56e73abc278535d61e0b 279 Pfam PF13460 NAD(P)H-binding 9 175 1.3E-13 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13295 026048e66ffb56e73abc278535d61e0b 279 PANTHER PTHR14194:SF59 5 275 1.2E-57 T 14-09-2016 AMK01_RS10015 dc77aae9abddf5b5cf7a889f52d82c1a 80 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 66 29.112 T 14-09-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMK01_RS10015 dc77aae9abddf5b5cf7a889f52d82c1a 80 Gene3D G3DSA:2.30.30.100 3 77 1.4E-35 T 14-09-2016 AMK01_RS10015 dc77aae9abddf5b5cf7a889f52d82c1a 80 PANTHER PTHR34772 2 80 1.1E-34 T 14-09-2016 AMK01_RS10015 dc77aae9abddf5b5cf7a889f52d82c1a 80 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 66 3.0E-32 T 14-09-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMK01_RS10015 dc77aae9abddf5b5cf7a889f52d82c1a 80 SUPERFAMILY SSF50182 7 66 8.5E-24 T 14-09-2016 IPR010920 LSM domain AMK01_RS10015 dc77aae9abddf5b5cf7a889f52d82c1a 80 PANTHER PTHR34772:SF1 2 80 1.1E-34 T 14-09-2016 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 SMART SM00387 1132 1246 2.5E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 Gene3D G3DSA:3.30.565.10 1073 1244 3.9E-35 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 SMART SM00091 883 949 2.1E-9 T 14-09-2016 IPR000014 PAS domain AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 SUPERFAMILY SSF47384 1002 1087 6.47E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1134 1244 4.0E-17 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 Pfam PF00989 PAS fold 883 945 1.3E-8 T 14-09-2016 IPR013767 PAS fold GO:0006355 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 SUPERFAMILY SSF55785 894 1005 2.58E-18 T 14-09-2016 IPR000014 PAS domain AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1018 1086 2.6E-16 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 Gene3D G3DSA:3.30.450.20 876 995 1.1E-15 T 14-09-2016 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1230 1243 4.1E-7 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1170 1184 4.1E-7 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1206 1224 4.1E-7 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 PANTHER PTHR24423 861 1243 2.5E-84 T 14-09-2016 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 SMART SM00388 1017 1086 5.8E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 Pfam PF13188 PAS domain 758 797 0.025 T 14-09-2016 IPR000014 PAS domain AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 SUPERFAMILY SSF55874 1075 1244 1.96E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 PANTHER PTHR24423:SF421 861 1243 2.5E-84 T 14-09-2016 AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 883 1004 5.3E-13 T 14-09-2016 IPR000014 PAS domain AMK01_RS03810 82532f0b579a1bca9e7c5e9a1d305ff5 1250 Gene3D G3DSA:1.10.287.130 1011 1072 4.3E-16 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS08790 a2ef74857be87f83e87d2af862f9fa37 263 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 15 257 3.4E-82 T 14-09-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 AMK01_RS08790 a2ef74857be87f83e87d2af862f9fa37 263 PANTHER PTHR11473:SF24 19 239 2.2E-63 T 14-09-2016 AMK01_RS08790 a2ef74857be87f83e87d2af862f9fa37 263 Gene3D G3DSA:1.10.800.10 2 241 4.8E-84 T 14-09-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMK01_RS08790 a2ef74857be87f83e87d2af862f9fa37 263 SUPERFAMILY SSF56534 4 249 5.62E-86 T 14-09-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMK01_RS08790 a2ef74857be87f83e87d2af862f9fa37 263 PANTHER PTHR11473 19 239 2.2E-63 T 14-09-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMK01_RS08790 a2ef74857be87f83e87d2af862f9fa37 263 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 118 129 - T 14-09-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMK01_RS08790 a2ef74857be87f83e87d2af862f9fa37 263 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 19 235 1.8E-41 T 14-09-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMK01_RS20625 cbb208bfb12b471ec227b1ffe43b1460 191 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 9 68 1.2E-30 T 14-09-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AMK01_RS20625 cbb208bfb12b471ec227b1ffe43b1460 191 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 9 115 2.0E-44 T 14-09-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR AMK01_RS20625 cbb208bfb12b471ec227b1ffe43b1460 191 Pfam PF05233 PHB accumulation regulatory domain 74 113 1.6E-16 T 14-09-2016 IPR007897 PHB accumulation regulatory AMK01_RS02595 392f495b60dba9eec42620b2109466f8 131 PANTHER PTHR10374:SF8 3 129 1.5E-29 T 14-09-2016 AMK01_RS02595 392f495b60dba9eec42620b2109466f8 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 3.8E-10 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS02595 392f495b60dba9eec42620b2109466f8 131 PANTHER PTHR10374 3 129 1.5E-29 T 14-09-2016 AMK01_RS02595 392f495b60dba9eec42620b2109466f8 131 SUPERFAMILY SSF54593 3 127 1.05E-23 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS02595 392f495b60dba9eec42620b2109466f8 131 Gene3D G3DSA:3.10.180.10 3 130 4.6E-28 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 SMART SM00420 9 61 3.3E-8 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 Gene3D G3DSA:3.40.50.1360 78 224 3.2E-7 T 14-09-2016 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 Pfam PF00455 DeoR C terminal sensor domain 77 233 3.4E-40 T 14-09-2016 IPR014036 DeoR C-terminal sensor domain AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 Pfam PF08220 DeoR-like helix-turn-helix domain 9 60 4.7E-12 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-09-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 SUPERFAMILY SSF46785 5 58 1.8E-8 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.7E-7 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.7E-7 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 PANTHER PTHR30363 4 255 9.2E-56 T 14-09-2016 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 SMART SM01134 74 235 1.1E-54 T 14-09-2016 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 SUPERFAMILY SSF100950 78 233 5.13E-23 T 14-09-2016 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 PANTHER PTHR30363:SF1 4 255 9.2E-56 T 14-09-2016 AMK01_RS20575 d91b36e60f68d05bcf269a808ca11180 258 Gene3D G3DSA:1.10.10.10 2 55 2.9E-7 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08500 2362b8c4303b9bd5b751110dab5bc25c 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.973 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK01_RS08500 2362b8c4303b9bd5b751110dab5bc25c 122 PANTHER PTHR11761 1 122 1.6E-78 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK01_RS08500 2362b8c4303b9bd5b751110dab5bc25c 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-09-2016 IPR019972 Ribosomal protein L14P, conserved site AMK01_RS08500 2362b8c4303b9bd5b751110dab5bc25c 122 SMART SM01374 1 122 3.1E-88 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK01_RS08500 2362b8c4303b9bd5b751110dab5bc25c 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.6E-58 T 14-09-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS08500 2362b8c4303b9bd5b751110dab5bc25c 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.2E-57 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK01_RS08500 2362b8c4303b9bd5b751110dab5bc25c 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-56 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK01_RS08500 2362b8c4303b9bd5b751110dab5bc25c 122 SUPERFAMILY SSF50193 1 122 4.32E-53 T 14-09-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK01_RS19865 a0c8518d9608c48cbcbe77931a1a9d90 268 PANTHER PTHR30151 19 268 7.7E-80 T 14-09-2016 AMK01_RS19865 a0c8518d9608c48cbcbe77931a1a9d90 268 Gene3D G3DSA:1.10.3720.10 61 256 6.0E-19 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19865 a0c8518d9608c48cbcbe77931a1a9d90 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 257 3.4E-24 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19865 a0c8518d9608c48cbcbe77931a1a9d90 268 SUPERFAMILY SSF161098 64 247 1.83E-24 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19865 a0c8518d9608c48cbcbe77931a1a9d90 268 PANTHER PTHR30151:SF20 19 268 7.7E-80 T 14-09-2016 AMK01_RS13315 d467554c3edd3ef712bc40142ebce570 157 PIRSF PIRSF021700 1 157 3.4E-64 T 14-09-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AMK01_RS13315 d467554c3edd3ef712bc40142ebce570 157 Gene3D G3DSA:3.10.180.10 1 128 1.7E-41 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS13315 d467554c3edd3ef712bc40142ebce570 157 PANTHER PTHR33990 1 157 9.4E-101 T 14-09-2016 AMK01_RS13315 d467554c3edd3ef712bc40142ebce570 157 PANTHER PTHR33990:SF3 1 157 9.4E-101 T 14-09-2016 AMK01_RS13315 d467554c3edd3ef712bc40142ebce570 157 SUPERFAMILY SSF54593 3 155 1.78E-46 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS13315 d467554c3edd3ef712bc40142ebce570 157 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 118 7.2E-48 T 14-09-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase AMK01_RS11930 2b47c05fce560a21ab7aec0a315dad18 139 SUPERFAMILY SSF109635 7 97 5.89E-34 T 14-09-2016 AMK01_RS11930 2b47c05fce560a21ab7aec0a315dad18 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 101 125 - T 14-09-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMK01_RS11930 2b47c05fce560a21ab7aec0a315dad18 139 SUPERFAMILY SSF57716 98 137 2.57E-9 T 14-09-2016 AMK01_RS11930 2b47c05fce560a21ab7aec0a315dad18 139 PANTHER PTHR33823:SF2 3 137 8.3E-47 T 14-09-2016 AMK01_RS11930 2b47c05fce560a21ab7aec0a315dad18 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 15 137 29.488 T 14-09-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMK01_RS11930 2b47c05fce560a21ab7aec0a315dad18 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 19 128 3.0E-46 T 14-09-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMK01_RS11930 2b47c05fce560a21ab7aec0a315dad18 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 96 131 3.8E-12 T 14-09-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMK01_RS11930 2b47c05fce560a21ab7aec0a315dad18 139 PANTHER PTHR33823 3 137 8.3E-47 T 14-09-2016 AMK01_RS03940 cdb820a5746e9efa0f88030addf25abe 439 Gene3D G3DSA:3.40.50.300 64 261 5.6E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03940 cdb820a5746e9efa0f88030addf25abe 439 Pfam PF00005 ABC transporter 67 198 1.0E-18 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS03940 cdb820a5746e9efa0f88030addf25abe 439 Pfam PF14524 Wzt C-terminal domain 282 406 8.0E-8 T 14-09-2016 IPR029439 Wzt, C-terminal AMK01_RS03940 cdb820a5746e9efa0f88030addf25abe 439 SMART SM00382 76 267 1.2E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03940 cdb820a5746e9efa0f88030addf25abe 439 SUPERFAMILY SSF52540 64 260 1.13E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03940 cdb820a5746e9efa0f88030addf25abe 439 PANTHER PTHR24220:SF117 64 265 1.3E-104 T 14-09-2016 AMK01_RS03940 cdb820a5746e9efa0f88030addf25abe 439 Gene3D G3DSA:2.70.50.60 282 386 9.5E-7 T 14-09-2016 AMK01_RS03940 cdb820a5746e9efa0f88030addf25abe 439 PANTHER PTHR24220 64 265 1.3E-104 T 14-09-2016 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 PANTHER PTHR24089:SF272 5 122 9.2E-19 T 14-09-2016 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 PANTHER PTHR24089 5 122 9.2E-19 T 14-09-2016 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 Gene3D G3DSA:1.20.5.710 6 50 1.3E-17 T 14-09-2016 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 1.8E-19 T 14-09-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 126 2.4E-30 T 14-09-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 3.4E-47 T 14-09-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 SUPERFAMILY SSF54736 55 126 5.76E-25 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 126 24.793 T 14-09-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 Gene3D G3DSA:3.30.1390.10 53 126 6.1E-34 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 SUPERFAMILY SSF48300 4 62 1.2E-16 T 14-09-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08405 7c9c180c7a0b98b278e389a04c15a58e 126 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 61 126 5.0E-18 T 14-09-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 Gene3D G3DSA:2.40.30.10 352 436 3.4E-4 T 14-09-2016 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 PANTHER PTHR23115 19 59 1.7E-61 T 14-09-2016 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 PANTHER PTHR23115 79 346 1.7E-61 T 14-09-2016 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 SUPERFAMILY SSF50465 338 436 5.76E-23 T 14-09-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 PRINTS PR00315 GTP-binding elongation factor signature 129 140 2.4E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 PRINTS PR00315 GTP-binding elongation factor signature 166 175 2.4E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 PRINTS PR00315 GTP-binding elongation factor signature 32 45 2.4E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 PRINTS PR00315 GTP-binding elongation factor signature 113 123 2.4E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 PRINTS PR00315 GTP-binding elongation factor signature 93 101 2.4E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 Gene3D G3DSA:3.40.50.300 20 235 2.0E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 SUPERFAMILY SSF50447 247 331 6.65E-18 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 31 435 1.1E-187 T 14-09-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 86 101 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 22 473 46.904 T 14-09-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 Pfam PF00009 Elongation factor Tu GTP binding domain 32 230 1.3E-41 T 14-09-2016 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 Gene3D G3DSA:2.40.30.10 248 351 3.1E-16 T 14-09-2016 AMK01_RS05805 afd98f13953626fac5e39de1b8b54fd1 498 SUPERFAMILY SSF52540 27 233 6.44E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12735 f0966163426a33ce8be42e83990c2ba4 1367 Pfam PF02514 CobN/Magnesium Chelatase 139 1351 0.0 T 14-09-2016 IPR003672 CobN/magnesium chelatase GO:0009058 AMK01_RS12735 f0966163426a33ce8be42e83990c2ba4 1367 PANTHER PTHR23304 247 901 0.0 T 14-09-2016 AMK01_RS12735 f0966163426a33ce8be42e83990c2ba4 1367 PANTHER PTHR23304 926 1355 0.0 T 14-09-2016 AMK01_RS12735 f0966163426a33ce8be42e83990c2ba4 1367 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 276 1360 0.0 T 14-09-2016 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 AMK01_RS12735 f0966163426a33ce8be42e83990c2ba4 1367 PANTHER PTHR23304:SF96 247 901 0.0 T 14-09-2016 AMK01_RS12735 f0966163426a33ce8be42e83990c2ba4 1367 PANTHER PTHR23304:SF96 26 190 0.0 T 14-09-2016 AMK01_RS12735 f0966163426a33ce8be42e83990c2ba4 1367 PANTHER PTHR23304 26 190 0.0 T 14-09-2016 AMK01_RS12735 f0966163426a33ce8be42e83990c2ba4 1367 PANTHER PTHR23304:SF96 926 1355 0.0 T 14-09-2016 AMK01_RS04635 8f73a1f0023fe69ccfe491da8a5a43e1 416 Gene3D G3DSA:3.40.50.150 233 415 2.5E-35 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04635 8f73a1f0023fe69ccfe491da8a5a43e1 416 PANTHER PTHR11061 2 416 5.9E-60 T 14-09-2016 AMK01_RS04635 8f73a1f0023fe69ccfe491da8a5a43e1 416 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 348 378 - T 14-09-2016 IPR030390 RNA methyltransferase TrmA, active site AMK01_RS04635 8f73a1f0023fe69ccfe491da8a5a43e1 416 SUPERFAMILY SSF53335 57 414 2.11E-55 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04635 8f73a1f0023fe69ccfe491da8a5a43e1 416 SUPERFAMILY SSF50249 5 47 6.28E-7 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS04635 8f73a1f0023fe69ccfe491da8a5a43e1 416 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 128 414 2.8E-14 T 14-09-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMK01_RS04635 8f73a1f0023fe69ccfe491da8a5a43e1 416 Gene3D G3DSA:2.40.50.140 5 67 1.8E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS04635 8f73a1f0023fe69ccfe491da8a5a43e1 416 PANTHER PTHR11061:SF30 2 416 5.9E-60 T 14-09-2016 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 Gene3D G3DSA:3.90.660.10 134 305 4.7E-36 T 14-09-2016 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 Pfam PF01593 Flavin containing amine oxidoreductase 107 360 2.7E-28 T 14-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 Pfam PF01593 Flavin containing amine oxidoreductase 13 105 1.9E-16 T 14-09-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 9.7E-6 T 14-09-2016 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 328 343 9.7E-6 T 14-09-2016 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 Gene3D G3DSA:3.40.50.720 5 32 8.2E-10 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 PANTHER PTHR10742 2 361 9.2E-45 T 14-09-2016 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 Gene3D G3DSA:3.90.660.10 33 107 4.6E-7 T 14-09-2016 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 SUPERFAMILY SSF51905 323 361 2.73E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 SUPERFAMILY SSF51905 1 223 2.73E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09875 89a2fcc9696076a08ceca34359a1d763 364 SUPERFAMILY SSF54373 204 304 9.16E-23 T 14-09-2016 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 PANTHER PTHR15680 2 115 3.5E-57 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 PANTHER PTHR15680 144 176 3.5E-57 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 SUPERFAMILY SSF50104 1 126 5.01E-47 T 14-09-2016 IPR008991 Translation protein SH3-like domain AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 14-09-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 116 1.6E-48 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 Pfam PF01245 Ribosomal protein L19 2 116 6.4E-49 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 30.925 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 PRINTS PR00061 Ribosomal protein L19 signature 8 37 8.5E-37 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 PRINTS PR00061 Ribosomal protein L19 signature 38 67 8.5E-37 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20350 8e5020a2f4d798d23672abab349142ef 180 PRINTS PR00061 Ribosomal protein L19 signature 92 117 8.5E-37 T 14-09-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 PANTHER PTHR10657 1 173 9.9E-59 T 14-09-2016 AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 Pfam PF13624 SurA N-terminal domain 1 164 1.2E-38 T 14-09-2016 AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 Gene3D G3DSA:3.10.50.40 261 375 2.6E-12 T 14-09-2016 AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 SUPERFAMILY SSF54534 221 354 5.57E-5 T 14-09-2016 AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 PANTHER PTHR10657 242 524 9.9E-59 T 14-09-2016 AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 Pfam PF13145 PPIC-type PPIASE domain 248 369 2.9E-23 T 14-09-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 SUPERFAMILY SSF109998 40 168 5.89E-22 T 14-09-2016 IPR027304 Trigger factor/SurA domain AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 SUPERFAMILY SSF109998 242 297 5.89E-22 T 14-09-2016 IPR027304 Trigger factor/SurA domain AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 PANTHER PTHR10657:SF13 1 173 9.9E-59 T 14-09-2016 AMK01_RS11135 2fbb573cca1c7004cf513ee804416779 630 PANTHER PTHR10657:SF13 242 524 9.9E-59 T 14-09-2016 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 PANTHER PTHR23342 13 295 2.8E-112 T 14-09-2016 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 SUPERFAMILY SSF53633 10 295 7.2E-93 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 TIGRFAM TIGR00761 argB: acetylglutamate kinase 27 270 4.8E-77 T 14-09-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 Hamap MF_00082_B Acetylglutamate kinase [argB]. 24 295 36.721 T 14-09-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 Gene3D G3DSA:3.40.1160.10 25 294 4.4E-108 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 PIRSF PIRSF000728 7 295 8.8E-106 T 14-09-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 PRINTS PR00474 Glutamate 5-kinase family signature 245 265 6.7E-8 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 PRINTS PR00474 Glutamate 5-kinase family signature 195 222 6.7E-8 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 6.7E-8 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK01_RS02340 be6bc2e68b514e2c7379d2a28b763ddc 295 Pfam PF00696 Amino acid kinase family 26 272 1.0E-51 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.7E-22 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 5.5E-181 T 14-09-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 6.5E-69 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 Gene3D G3DSA:3.40.50.300 97 297 7.9E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 SUPERFAMILY SSF52540 42 354 1.38E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 Gene3D G3DSA:1.10.260.30 327 431 7.6E-36 T 14-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 SMART SM00382 99 301 7.9E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 SMART SM00962 100 296 1.6E-109 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 SMART SM00963 1 86 1.4E-33 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 PANTHER PTHR11564:SF7 1 435 1.6E-228 T 14-09-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 SUPERFAMILY SSF47446 327 431 8.99E-34 T 14-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 32.128 T 14-09-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 Pfam PF02978 Signal peptide binding domain 327 427 1.3E-29 T 14-09-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 PANTHER PTHR11564 1 435 1.6E-228 T 14-09-2016 AMK01_RS20325 70dc55edbee73da9b0c2de78d8526709 525 Gene3D G3DSA:1.20.120.140 2 89 1.8E-33 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 221 232 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 250 299 4.8E-14 T 14-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 1.8E-16 T 14-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Gene3D G3DSA:2.20.25.90 262 302 4.4E-17 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Gene3D G3DSA:3.40.50.740 305 382 1.7E-84 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Gene3D G3DSA:3.40.50.740 575 777 1.7E-84 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Pfam PF00384 Molybdopterin oxidoreductase 305 735 8.3E-75 T 14-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 SMART SM00926 248 302 8.8E-14 T 14-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 253 928 6.7E-294 T 14-09-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Gene3D G3DSA:3.40.228.10 383 574 6.4E-59 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 SUPERFAMILY SSF53706 250 775 5.37E-193 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Pfam PF00037 4Fe-4S binding domain 219 235 2.3E-5 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Pfam PF01568 Molydopterin dinucleotide binding domain 820 924 6.4E-27 T 14-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Gene3D G3DSA:2.40.40.20 778 930 7.0E-40 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 PANTHER PTHR11615:SF112 21 69 6.7E-243 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 PANTHER PTHR11615:SF112 550 948 6.7E-243 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 PANTHER PTHR11615:SF112 247 511 6.7E-243 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 178 189 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 SUPERFAMILY SSF54862 93 243 3.89E-37 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Gene3D G3DSA:3.30.70.20 164 227 2.1E-14 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 SMART SM00929 101 141 3.1E-19 T 14-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 94 5.1E-24 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 PANTHER PTHR11615 21 69 6.7E-243 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 PANTHER PTHR11615 550 948 6.7E-243 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 PANTHER PTHR11615 247 511 6.7E-243 T 14-09-2016 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 SUPERFAMILY SSF54292 19 92 3.57E-19 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 SUPERFAMILY SSF50692 785 929 3.39E-40 T 14-09-2016 IPR009010 Aspartate decarboxylase-like domain AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Gene3D G3DSA:3.10.20.30 13 74 8.6E-9 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 PIRSF PIRSF036643 15 958 0.0 T 14-09-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AMK01_RS19830 44c2f822d427d83d040973953de2071f 959 Gene3D G3DSA:3.30.70.20 228 261 2.2E-4 T 14-09-2016 AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 Pfam PF00795 Carbon-nitrogen hydrolase 12 250 4.7E-24 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 Gene3D G3DSA:3.60.110.10 10 250 1.4E-52 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 Pfam PF02540 NAD synthase 281 532 2.9E-73 T 14-09-2016 IPR022310 NAD/GMP synthase AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 TIGRFAM TIGR00552 nadE: NAD+ synthetase 284 538 2.2E-63 T 14-09-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 SUPERFAMILY SSF52402 270 542 1.4E-75 T 14-09-2016 AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 SUPERFAMILY SSF56317 9 250 3.4E-57 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 Gene3D G3DSA:3.40.50.620 272 541 3.3E-73 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 PIRSF PIRSF006630 8 559 1.0E-182 T 14-09-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 AMK01_RS12100 43b9afbbc0a1f5bf75824f18a91cf5e3 559 PANTHER PTHR23090 8 556 6.9E-146 T 14-09-2016 AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 Gene3D G3DSA:3.90.180.10 2 190 4.9E-60 T 14-09-2016 IPR011032 GroES-like AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 PANTHER PTHR11695:SF560 15 108 2.1E-180 T 14-09-2016 AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 PANTHER PTHR11695:SF560 128 375 2.1E-180 T 14-09-2016 AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 SUPERFAMILY SSF50129 324 375 4.0E-13 T 14-09-2016 IPR011032 GroES-like AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 Gene3D G3DSA:3.40.50.720 191 313 3.9E-33 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 SUPERFAMILY SSF50129 1 186 3.83E-67 T 14-09-2016 IPR011032 GroES-like AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 PANTHER PTHR11695 128 375 2.1E-180 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 PANTHER PTHR11695 15 108 2.1E-180 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 Pfam PF00107 Zinc-binding dehydrogenase 197 326 2.3E-16 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 SUPERFAMILY SSF51735 160 340 9.25E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 374 2.6E-176 T 14-09-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AMK01_RS11415 10c3232ebfedab839f0288855b78fe59 375 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 2.4E-24 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 436 446 - T 14-09-2016 IPR017953 Carbohydrate kinase, predicted, conserved site AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 PANTHER PTHR12592:SF0 1 489 7.1E-108 T 14-09-2016 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 Gene3D G3DSA:3.40.1190.20 233 487 8.9E-72 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 Pfam PF03853 YjeF-related protein N-terminus 32 187 1.3E-38 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 489 17.458 T 14-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 PANTHER PTHR12592 1 489 7.1E-108 T 14-09-2016 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 208 22.862 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 Pfam PF01256 Carbohydrate kinase 248 476 2.4E-48 T 14-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 SUPERFAMILY SSF64153 9 246 3.01E-57 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 SUPERFAMILY SSF53613 225 486 6.16E-58 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 Gene3D G3DSA:3.40.50.10260 9 232 3.5E-61 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 8 208 4.5E-40 T 14-09-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 PIRSF PIRSF017184 8 489 1.2E-105 T 14-09-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AMK01_RS10800 8c09c60523e492970b1d2c77dd581af5 490 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 484 1.0E-52 T 14-09-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK01_RS00950 7e9777e0700fd81a20c3b5bac8123f97 301 SUPERFAMILY SSF53850 26 296 6.58E-51 T 14-09-2016 AMK01_RS00950 7e9777e0700fd81a20c3b5bac8123f97 301 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 298 1.6E-88 T 14-09-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 AMK01_RS00950 7e9777e0700fd81a20c3b5bac8123f97 301 PANTHER PTHR35841 71 300 3.2E-26 T 14-09-2016 AMK01_RS00950 7e9777e0700fd81a20c3b5bac8123f97 301 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 288 5.6E-60 T 14-09-2016 AMK01_RS00950 7e9777e0700fd81a20c3b5bac8123f97 301 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 6 260 4.7E-77 T 14-09-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AMK01_RS00950 7e9777e0700fd81a20c3b5bac8123f97 301 Gene3D G3DSA:3.40.190.10 121 214 4.7E-11 T 14-09-2016 AMK01_RS13045 e2d6347255f760221278732e9fea5db8 265 SUPERFAMILY SSF53335 27 164 3.72E-38 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS13045 e2d6347255f760221278732e9fea5db8 265 Gene3D G3DSA:3.40.50.150 34 163 2.2E-35 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS13045 e2d6347255f760221278732e9fea5db8 265 PANTHER PTHR10108 35 165 1.1E-29 T 14-09-2016 AMK01_RS13045 e2d6347255f760221278732e9fea5db8 265 Pfam PF13649 Methyltransferase domain 51 147 2.4E-20 T 14-09-2016 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PANTHER PTHR30386 117 406 3.6E-97 T 14-09-2016 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PANTHER PTHR30386 2 81 3.6E-97 T 14-09-2016 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PANTHER PTHR30386:SF3 117 406 3.6E-97 T 14-09-2016 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PANTHER PTHR30386:SF3 2 81 3.6E-97 T 14-09-2016 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 Pfam PF13437 HlyD family secretion protein 258 361 1.1E-13 T 14-09-2016 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 Pfam PF13533 Biotin-lipoyl like 36 74 5.8E-6 T 14-09-2016 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 350 2.0E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 385 2.0E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 303 327 2.0E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 405 2.0E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 38 58 2.0E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 270 291 2.0E-42 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 2 406 6.9E-108 T 14-09-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 Gene3D G3DSA:2.40.50.100 30 60 1.0E-15 T 14-09-2016 AMK01_RS01845 48920ee032d499867590274ad4c4f6e0 406 Gene3D G3DSA:2.40.50.100 255 289 1.0E-15 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 479 8.1E-177 T 14-09-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 SUPERFAMILY SSF51905 1 389 1.3E-71 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PIRSF PIRSF000350 1 477 4.2E-76 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 SUPERFAMILY SSF55424 362 478 2.41E-41 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.0E-37 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 1.0E-37 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 294 1.0E-37 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 190 208 1.0E-37 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 306 328 1.0E-37 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 Gene3D G3DSA:3.30.390.30 348 478 3.1E-49 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PANTHER PTHR22912 149 474 1.7E-201 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PANTHER PTHR22912 1 120 1.7E-201 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PANTHER PTHR22912:SF125 149 474 1.7E-201 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PANTHER PTHR22912:SF125 1 120 1.7E-201 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 341 1.0E-68 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 438 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 163 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 379 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 190 215 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 293 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 321 328 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 445 465 1.4E-66 T 14-09-2016 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 Gene3D G3DSA:3.50.50.60 160 347 3.3E-52 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 Gene3D G3DSA:3.50.50.60 4 159 6.8E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09820 131e6bcf1eeeb517a70819828af34c67 481 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 362 470 4.4E-39 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS02705 a2e9539467dfd8fc0c1111cfa255a7ae 293 SUPERFAMILY SSF52540 82 266 1.87E-22 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02705 a2e9539467dfd8fc0c1111cfa255a7ae 293 Gene3D G3DSA:3.40.50.300 14 286 1.6E-98 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02705 a2e9539467dfd8fc0c1111cfa255a7ae 293 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 48 275 2.8E-107 T 14-09-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AMK01_RS02705 a2e9539467dfd8fc0c1111cfa255a7ae 293 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 48 274 1.6E-97 T 14-09-2016 IPR022488 Polyphosphate kinase-2-related AMK01_RS02705 a2e9539467dfd8fc0c1111cfa255a7ae 293 PIRSF PIRSF028756 21 288 3.4E-104 T 14-09-2016 IPR016898 Polyphosphate kinase 2 AMK01_RS02705 a2e9539467dfd8fc0c1111cfa255a7ae 293 PANTHER PTHR34383:SF2 41 286 9.2E-119 T 14-09-2016 AMK01_RS02705 a2e9539467dfd8fc0c1111cfa255a7ae 293 PANTHER PTHR34383 41 286 9.2E-119 T 14-09-2016 AMK01_RS19175 b4c43d8d75f138e9ac02086dd18ac398 118 PIRSF PIRSF006113 1 118 1.0E-23 T 14-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AMK01_RS19175 b4c43d8d75f138e9ac02086dd18ac398 118 SUPERFAMILY SSF55620 1 117 2.61E-35 T 14-09-2016 AMK01_RS19175 b4c43d8d75f138e9ac02086dd18ac398 118 PANTHER PTHR12589 1 117 2.4E-28 T 14-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AMK01_RS19175 b4c43d8d75f138e9ac02086dd18ac398 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 96 7.4E-28 T 14-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AMK01_RS19175 b4c43d8d75f138e9ac02086dd18ac398 118 Gene3D G3DSA:3.30.479.10 1 117 9.8E-37 T 14-09-2016 AMK01_RS19175 b4c43d8d75f138e9ac02086dd18ac398 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 117 1.4E-31 T 14-09-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 Gene3D G3DSA:3.40.50.720 2 228 3.6E-70 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 SUPERFAMILY SSF51735 1 228 1.7E-68 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-27 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.7E-27 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.7E-27 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.7E-27 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.7E-27 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.7E-27 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 Pfam PF00106 short chain dehydrogenase 7 196 1.1E-53 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.2E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.2E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.2E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PANTHER PTHR24322:SF413 11 139 1.1E-62 T 14-09-2016 AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PANTHER PTHR24322:SF413 155 184 1.1E-62 T 14-09-2016 AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PANTHER PTHR24322 11 139 1.1E-62 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 PANTHER PTHR24322 155 184 1.1E-62 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01620 729d5a4ba79489b205edde447eac83a8 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 Pfam PF16326 ABC transporter C-terminal domain 556 618 3.4E-9 T 14-09-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 Gene3D G3DSA:3.40.50.300 309 519 2.2E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 Gene3D G3DSA:3.40.50.300 1 263 1.1E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 PANTHER PTHR19211 570 608 5.7E-242 T 14-09-2016 AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 PANTHER PTHR19211 1 515 5.7E-242 T 14-09-2016 AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 SUPERFAMILY SSF52540 116 240 9.16E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 SUPERFAMILY SSF52540 2 81 9.16E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 SMART SM00382 336 503 5.2E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 SMART SM00382 26 220 2.2E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 Pfam PF12848 ABC transporter 214 290 1.9E-25 T 14-09-2016 IPR032781 ABC-transporter extension domain AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 SUPERFAMILY SSF52540 293 508 1.25E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 Pfam PF00005 ABC transporter 17 175 1.1E-23 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 Pfam PF00005 ABC transporter 327 458 1.2E-20 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS07480 1afc8502d34600b26e1350ddd908f95a 627 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 PANTHER PTHR22993:SF15 1 296 3.9E-105 T 14-09-2016 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 ProSitePatterns PS01242 Zinc finger FPG-type signature. 269 295 - T 14-09-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 SUPERFAMILY SSF46946 148 242 1.91E-26 T 14-09-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 SUPERFAMILY SSF57716 242 296 3.99E-14 T 14-09-2016 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 131 2.2E-34 T 14-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 SMART SM00898 2 132 1.1E-58 T 14-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 Gene3D G3DSA:3.20.190.10 2 148 8.9E-39 T 14-09-2016 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 SUPERFAMILY SSF81624 2 155 2.75E-35 T 14-09-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 Pfam PF06827 Zinc finger found in FPG and IleRS 266 296 9.5E-8 T 14-09-2016 IPR010663 Zinc finger, FPG/IleRS-type AMK01_RS01950 88aae511324f75da12a353af3048b989 296 SMART SM01232 148 246 1.5E-40 T 14-09-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 148 243 1.8E-20 T 14-09-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 Gene3D G3DSA:1.10.8.50 149 296 4.4E-43 T 14-09-2016 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 PANTHER PTHR22993 1 296 3.9E-105 T 14-09-2016 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 295 3.5E-75 T 14-09-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMK01_RS01950 88aae511324f75da12a353af3048b989 296 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 296 42.766 T 14-09-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 Pfam PF10150 Ribonuclease E/G family 300 571 2.2E-94 T 14-09-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 Hamap MF_00970 Ribonuclease E [rne]. 2 954 33.585 T 14-09-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 604 2.8E-153 T 14-09-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 PANTHER PTHR30001 249 942 8.3E-248 T 14-09-2016 AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 PANTHER PTHR30001 1 121 8.3E-248 T 14-09-2016 AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 PANTHER PTHR30001:SF1 249 942 8.3E-248 T 14-09-2016 AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 PANTHER PTHR30001:SF1 1 121 8.3E-248 T 14-09-2016 AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 Gene3D G3DSA:2.40.50.140 31 83 6.9E-41 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 Gene3D G3DSA:2.40.50.140 262 304 6.9E-41 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 SUPERFAMILY SSF50249 260 304 2.95E-14 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08300 7e3f43409d3f6965f4d282a75bf61863 957 SUPERFAMILY SSF50249 40 81 2.95E-14 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS11675 b4877524004f4be6de2c84f17aa96f96 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 5.2E-32 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11675 b4877524004f4be6de2c84f17aa96f96 80 PANTHER PTHR34696 1 80 2.7E-30 T 14-09-2016 AMK01_RS11675 b4877524004f4be6de2c84f17aa96f96 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 79 3.0E-31 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11675 b4877524004f4be6de2c84f17aa96f96 80 SUPERFAMILY SSF82697 2 78 7.67E-28 T 14-09-2016 AMK01_RS11675 b4877524004f4be6de2c84f17aa96f96 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 21.888 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11675 b4877524004f4be6de2c84f17aa96f96 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 3 79 9.6E-29 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11675 b4877524004f4be6de2c84f17aa96f96 80 Gene3D G3DSA:3.30.1280.10 2 79 1.6E-34 T 14-09-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 Pfam PF00005 ABC transporter 19 161 3.0E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 PANTHER PTHR24220 5 267 1.1E-154 T 14-09-2016 AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 Gene3D G3DSA:2.40.50.100 319 333 3.6E-4 T 14-09-2016 AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 Gene3D G3DSA:2.40.50.100 245 259 3.6E-4 T 14-09-2016 AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 SUPERFAMILY SSF50331 236 332 3.64E-22 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 Gene3D G3DSA:2.40.50.140 260 318 1.2E-13 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 PANTHER PTHR24220:SF319 5 267 1.1E-154 T 14-09-2016 AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 Pfam PF08402 TOBE domain 255 325 1.5E-8 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 SMART SM00382 28 211 3.2E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 SUPERFAMILY SSF52540 4 242 6.82E-83 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS14855 21bef0ac1a17475463bcfa36a3aa4a43 333 Gene3D G3DSA:3.40.50.300 3 234 5.3E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14505 68563e1de593bc543108491392425075 611 Gene3D G3DSA:3.90.230.10 312 575 6.7E-58 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS14505 68563e1de593bc543108491392425075 611 PANTHER PTHR10804 294 607 2.3E-199 T 14-09-2016 AMK01_RS14505 68563e1de593bc543108491392425075 611 PANTHER PTHR10804 1 190 2.3E-199 T 14-09-2016 AMK01_RS14505 68563e1de593bc543108491392425075 611 Pfam PF00557 Metallopeptidase family M24 325 537 1.8E-42 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS14505 68563e1de593bc543108491392425075 611 Gene3D G3DSA:3.40.350.10 181 295 8.8E-4 T 14-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMK01_RS14505 68563e1de593bc543108491392425075 611 Pfam PF16189 Creatinase/Prolidase N-terminal domain 158 318 6.0E-29 T 14-09-2016 AMK01_RS14505 68563e1de593bc543108491392425075 611 Gene3D G3DSA:3.40.350.10 15 138 1.1E-15 T 14-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMK01_RS14505 68563e1de593bc543108491392425075 611 Pfam PF01321 Creatinase/Prolidase N-terminal domain 17 138 1.1E-13 T 14-09-2016 IPR000587 Creatinase, N-terminal GO:0016787 AMK01_RS14505 68563e1de593bc543108491392425075 611 PANTHER PTHR10804:SF105 294 607 2.3E-199 T 14-09-2016 AMK01_RS14505 68563e1de593bc543108491392425075 611 Pfam PF16188 C-terminal region of peptidase_M24 549 609 2.6E-20 T 14-09-2016 IPR032416 Peptidase M24, C-terminal domain AMK01_RS14505 68563e1de593bc543108491392425075 611 SUPERFAMILY SSF53092 15 137 3.49E-8 T 14-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal AMK01_RS14505 68563e1de593bc543108491392425075 611 PANTHER PTHR10804:SF105 1 190 2.3E-199 T 14-09-2016 AMK01_RS14505 68563e1de593bc543108491392425075 611 SUPERFAMILY SSF55920 315 574 4.19E-54 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 PANTHER PTHR10055:SF10 191 354 2.8E-154 T 14-09-2016 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 352 1.8E-84 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 217 227 3.5E-26 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 18 34 3.5E-26 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 3.5E-26 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 3.5E-26 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 SUPERFAMILY SSF52374 7 352 9.19E-89 T 14-09-2016 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 5 353 37.94 T 14-09-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 PANTHER PTHR10055 191 354 2.8E-154 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 Gene3D G3DSA:3.40.50.620 6 227 5.6E-80 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 PANTHER PTHR10055 5 170 2.8E-154 T 14-09-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 Gene3D G3DSA:1.10.240.10 228 320 2.4E-16 T 14-09-2016 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 PANTHER PTHR10055:SF10 5 170 2.8E-154 T 14-09-2016 AMK01_RS02110 7f44964ff50fb3b6b7fe192dbc215630 354 Pfam PF00579 tRNA synthetases class I (W and Y) 8 290 6.9E-71 T 14-09-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS08045 c91476fa2917db86ea2299bed2d9ed87 328 PANTHER PTHR11732 1 318 3.6E-74 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS08045 c91476fa2917db86ea2299bed2d9ed87 328 Gene3D G3DSA:3.20.20.100 1 317 6.4E-69 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS08045 c91476fa2917db86ea2299bed2d9ed87 328 Pfam PF00248 Aldo/keto reductase family 15 316 1.7E-60 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS08045 c91476fa2917db86ea2299bed2d9ed87 328 PANTHER PTHR11732:SF185 1 318 3.6E-74 T 14-09-2016 AMK01_RS08045 c91476fa2917db86ea2299bed2d9ed87 328 SUPERFAMILY SSF51430 1 322 1.83E-70 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS08045 c91476fa2917db86ea2299bed2d9ed87 328 PRINTS PR00069 Aldo-keto reductase signature 106 124 8.7E-6 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS08045 c91476fa2917db86ea2299bed2d9ed87 328 PRINTS PR00069 Aldo-keto reductase signature 42 66 8.7E-6 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS08045 c91476fa2917db86ea2299bed2d9ed87 328 PRINTS PR00069 Aldo-keto reductase signature 138 155 8.7E-6 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 SUPERFAMILY SSF52540 317 586 1.87E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 Gene3D G3DSA:1.10.8.60 502 585 5.5E-30 T 14-09-2016 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 677 685 - T 14-09-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 SMART SM00382 350 494 7.5E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 PANTHER PTHR10046 14 777 0.0 T 14-09-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 Gene3D G3DSA:3.30.230.10 591 772 1.1E-74 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 PANTHER PTHR10046:SF43 14 777 0.0 T 14-09-2016 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 596 612 4.8E-56 T 14-09-2016 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 674 693 4.8E-56 T 14-09-2016 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 727 745 4.8E-56 T 14-09-2016 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 4.8E-56 T 14-09-2016 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 704 723 4.8E-56 T 14-09-2016 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 571 773 9.6E-99 T 14-09-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 TIGRFAM TIGR00763 lon: endopeptidase La 14 772 2.8E-299 T 14-09-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 SMART SM00464 12 204 3.3E-74 T 14-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 203 1.7E-41 T 14-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 PIRSF PIRSF001174 1 776 0.0 T 14-09-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 Hamap MF_01973 Lon protease [lon]. 13 773 72.317 T 14-09-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 SUPERFAMILY SSF54211 596 771 2.28E-58 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 Gene3D G3DSA:3.40.50.300 313 501 2.6E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 490 9.9E-20 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS08030 17afa0e1b0b0111dacf711e506e04db6 805 SUPERFAMILY SSF88697 14 203 3.48E-46 T 14-09-2016 IPR015947 PUA-like domain AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 Gene3D G3DSA:3.50.50.60 4 177 1.6E-36 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 Gene3D G3DSA:3.50.50.60 263 346 1.6E-36 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 PANTHER PTHR13789:SF5 1 379 2.6E-71 T 14-09-2016 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 Pfam PF01494 FAD binding domain 5 310 1.3E-30 T 14-09-2016 IPR002938 FAD-binding domain GO:0071949 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.8E-21 T 14-09-2016 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 3.8E-21 T 14-09-2016 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 3.8E-21 T 14-09-2016 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.8E-21 T 14-09-2016 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 SUPERFAMILY SSF51905 262 378 1.09E-49 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 SUPERFAMILY SSF51905 4 172 1.09E-49 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 379 6.7E-95 T 14-09-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 AMK01_RS10055 b55d7cc45d8dd39345ef1679b99f4c81 403 PANTHER PTHR13789 1 379 2.6E-71 T 14-09-2016 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 Gene3D G3DSA:3.10.290.10 334 415 1.4E-24 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 7.6E-25 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 7.6E-25 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 7.6E-25 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 7.6E-25 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 415 4.2E-113 T 14-09-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 416 42.787 T 14-09-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 Pfam PF00579 tRNA synthetases class I (W and Y) 34 327 1.0E-72 T 14-09-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 Gene3D G3DSA:3.40.50.620 3 238 7.7E-98 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 SUPERFAMILY SSF52374 7 325 4.13E-100 T 14-09-2016 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 SUPERFAMILY SSF55174 317 415 8.24E-18 T 14-09-2016 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 PANTHER PTHR11766 7 415 8.8E-176 T 14-09-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 AMK01_RS11565 88098f1da7fba005310e91c445a0eb94 418 Gene3D G3DSA:1.10.240.10 239 330 4.2E-35 T 14-09-2016 AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 SUPERFAMILY SSF53850 90 294 1.55E-47 T 14-09-2016 AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 Gene3D G3DSA:1.10.10.10 2 80 2.8E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 PANTHER PTHR30537 1 298 2.8E-119 T 14-09-2016 AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.3E-19 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 Pfam PF03466 LysR substrate binding domain 88 288 9.8E-46 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 Gene3D G3DSA:3.40.190.10 92 175 1.0E-26 T 14-09-2016 AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 SUPERFAMILY SSF46785 2 111 4.36E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 Gene3D G3DSA:3.40.190.10 176 256 1.1E-23 T 14-09-2016 AMK01_RS04125 5e963c9d708b4242a4f0aebe307ddca8 298 PANTHER PTHR30537:SF5 1 298 2.8E-119 T 14-09-2016 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 PANTHER PTHR23077 233 259 5.9E-40 T 14-09-2016 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 235 369 7.3E-29 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 SUPERFAMILY SSF52540 195 424 7.99E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 Gene3D G3DSA:3.40.50.300 198 377 2.0E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 SUPERFAMILY SSF140990 440 625 8.24E-25 T 14-09-2016 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 Gene3D G3DSA:1.10.8.60 378 448 6.7E-7 T 14-09-2016 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 Pfam PF01434 Peptidase family M41 447 620 8.8E-14 T 14-09-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 PANTHER PTHR23077:SF55 279 421 5.9E-40 T 14-09-2016 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 PANTHER PTHR23077:SF55 623 632 5.9E-40 T 14-09-2016 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 PANTHER PTHR23077:SF55 233 259 5.9E-40 T 14-09-2016 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 SMART SM00382 231 371 2.1E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 PANTHER PTHR23077 279 421 5.9E-40 T 14-09-2016 AMK01_RS16255 7de4b68c81bf9d3b894c781f811b15c0 639 PANTHER PTHR23077 623 632 5.9E-40 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 SUPERFAMILY SSF51735 3 159 8.62E-40 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 PANTHER PTHR22604:SF128 2 213 1.8E-111 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 PANTHER PTHR22604 265 415 1.8E-111 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 PANTHER PTHR22604 2 213 1.8E-111 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 SUPERFAMILY SSF55347 133 217 2.78E-29 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 SUPERFAMILY SSF55347 266 321 2.78E-29 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 PANTHER PTHR22604:SF128 265 415 1.8E-111 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 126 5.7E-24 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 139 214 2.8E-15 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 Gene3D G3DSA:3.30.360.10 347 405 6.0E-52 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 Gene3D G3DSA:3.30.360.10 267 315 6.0E-52 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 Gene3D G3DSA:3.30.360.10 136 216 6.0E-52 T 14-09-2016 AMK01_RS00400 0653c17e9f0f3369a5272545fce1342a 425 Gene3D G3DSA:3.40.50.720 1 135 2.7E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00990 7fae97644cdaf06de71fc359355585fd 158 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 16 157 2.0E-48 T 14-09-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 AMK01_RS00990 7fae97644cdaf06de71fc359355585fd 158 Pfam PF06754 Phosphonate metabolism protein PhnG 16 156 7.3E-52 T 14-09-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 AMK01_RS14810 12cc03df30abc27ce68f23a7b4581577 461 PANTHER PTHR11699:SF65 3 457 3.8E-215 T 14-09-2016 AMK01_RS14810 12cc03df30abc27ce68f23a7b4581577 461 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 14-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS14810 12cc03df30abc27ce68f23a7b4581577 461 Gene3D G3DSA:3.40.605.10 3 242 3.6E-60 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS14810 12cc03df30abc27ce68f23a7b4581577 461 Gene3D G3DSA:3.40.309.10 243 428 4.8E-62 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS14810 12cc03df30abc27ce68f23a7b4581577 461 Pfam PF00171 Aldehyde dehydrogenase family 4 453 3.7E-120 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS14810 12cc03df30abc27ce68f23a7b4581577 461 PANTHER PTHR11699 3 457 3.8E-215 T 14-09-2016 AMK01_RS14810 12cc03df30abc27ce68f23a7b4581577 461 SUPERFAMILY SSF53720 4 457 3.53E-132 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS18075 5a0349229d9144b029743cfb5a646828 340 Gene3D G3DSA:3.20.20.70 2 333 7.6E-148 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS18075 5a0349229d9144b029743cfb5a646828 340 PANTHER PTHR11627 1 340 1.7E-177 T 14-09-2016 AMK01_RS18075 5a0349229d9144b029743cfb5a646828 340 PANTHER PTHR11627:SF20 1 340 1.7E-177 T 14-09-2016 AMK01_RS18075 5a0349229d9144b029743cfb5a646828 340 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 214 224 - T 14-09-2016 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS18075 5a0349229d9144b029743cfb5a646828 340 SUPERFAMILY SSF51569 2 338 1.26E-128 T 14-09-2016 AMK01_RS18075 5a0349229d9144b029743cfb5a646828 340 Pfam PF00274 Fructose-bisphosphate aldolase class-I 5 338 2.3E-138 T 14-09-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 SUPERFAMILY SSF55124 315 421 1.21E-24 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 SUPERFAMILY SSF55124 252 276 1.21E-24 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 SUPERFAMILY SSF56014 407 549 8.24E-34 T 14-09-2016 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 SUPERFAMILY SSF56014 120 282 4.58E-49 T 14-09-2016 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 328 397 1.1E-14 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 110 3.0E-16 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 412 527 3.7E-10 T 14-09-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 271 1.5E-43 T 14-09-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 SUPERFAMILY SSF55124 1 126 1.49E-31 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 Gene3D G3DSA:3.30.413.10 408 548 5.4E-32 T 14-09-2016 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 Gene3D G3DSA:3.30.413.10 120 272 7.8E-47 T 14-09-2016 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 PANTHER PTHR11493:SF47 327 550 9.6E-149 T 14-09-2016 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 PANTHER PTHR11493:SF47 1 294 9.6E-149 T 14-09-2016 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 PANTHER PTHR11493 327 550 9.6E-149 T 14-09-2016 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 PANTHER PTHR11493 1 294 9.6E-149 T 14-09-2016 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 Gene3D G3DSA:3.90.480.10 321 402 3.0E-36 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS10045 0be6d7e8abc05d3feb3e712d0330623e 556 Gene3D G3DSA:3.90.480.10 48 117 3.0E-36 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PANTHER PTHR11938 1 402 1.5E-83 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 395 417 2.3E-18 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 294 2.3E-18 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 2.3E-18 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 371 387 2.3E-18 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 Gene3D G3DSA:3.50.50.60 239 380 6.8E-35 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 164 2.8E-9 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 423 2.8E-9 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 296 2.8E-9 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 SUPERFAMILY SSF46548 8 151 3.5E-33 T 14-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 127 1.4E-35 T 14-09-2016 IPR028261 Dihydroprymidine dehydrogenase domain II AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 SUPERFAMILY SSF51971 140 380 1.18E-50 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 SUPERFAMILY SSF51971 351 442 7.06E-8 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 PANTHER PTHR11938:SF108 1 402 1.5E-83 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 Gene3D G3DSA:3.50.50.60 384 440 3.2E-6 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 431 1.9E-29 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 Gene3D G3DSA:1.10.1060.10 11 136 1.9E-35 T 14-09-2016 AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 Gene3D G3DSA:3.40.50.720 222 238 9.7E-19 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16875 00fa7d5eb2641b7940d80aca4ce3b996 453 Gene3D G3DSA:3.40.50.720 137 173 9.7E-19 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 Hamap MF_00109 Shikimate kinase [aroK]. 22 187 27.958 T 14-09-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 Pfam PF01202 Shikimate kinase 31 186 8.4E-50 T 14-09-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 ProSitePatterns PS01128 Shikimate kinase signature. 78 103 - T 14-09-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 PRINTS PR01100 Shikimate kinase family signature 49 62 1.3E-20 T 14-09-2016 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 PRINTS PR01100 Shikimate kinase family signature 25 40 1.3E-20 T 14-09-2016 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 PRINTS PR01100 Shikimate kinase family signature 77 85 1.3E-20 T 14-09-2016 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 PRINTS PR01100 Shikimate kinase family signature 95 104 1.3E-20 T 14-09-2016 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 PRINTS PR01100 Shikimate kinase family signature 116 133 1.3E-20 T 14-09-2016 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 PANTHER PTHR21087 10 194 4.8E-57 T 14-09-2016 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 PANTHER PTHR21087:SF0 10 194 4.8E-57 T 14-09-2016 AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 SUPERFAMILY SSF52540 24 187 1.84E-27 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19670 fb4f48fbef8633854d0dcb56712f8571 195 Gene3D G3DSA:3.40.50.300 22 190 3.6E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09165 a33c9a22e5900e38ae89ff4b27773333 110 Gene3D G3DSA:2.60.300.12 6 98 3.3E-33 T 14-09-2016 IPR000361 FeS cluster biogenesis AMK01_RS09165 a33c9a22e5900e38ae89ff4b27773333 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 109 3.6E-37 T 14-09-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AMK01_RS09165 a33c9a22e5900e38ae89ff4b27773333 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 14-09-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site AMK01_RS09165 a33c9a22e5900e38ae89ff4b27773333 110 SUPERFAMILY SSF89360 6 98 5.23E-31 T 14-09-2016 IPR000361 FeS cluster biogenesis AMK01_RS09165 a33c9a22e5900e38ae89ff4b27773333 110 PANTHER PTHR10072 6 110 2.8E-47 T 14-09-2016 AMK01_RS09165 a33c9a22e5900e38ae89ff4b27773333 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 105 1.6E-20 T 14-09-2016 IPR000361 FeS cluster biogenesis AMK01_RS17330 5ac798488015d5211aff5a1bd54fd61c 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 292 2.3E-10 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17330 5ac798488015d5211aff5a1bd54fd61c 294 Gene3D G3DSA:1.10.3720.10 10 285 1.1E-53 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17330 5ac798488015d5211aff5a1bd54fd61c 294 PANTHER PTHR32243 4 292 2.2E-86 T 14-09-2016 AMK01_RS17330 5ac798488015d5211aff5a1bd54fd61c 294 PANTHER PTHR32243:SF13 4 292 2.2E-86 T 14-09-2016 AMK01_RS17330 5ac798488015d5211aff5a1bd54fd61c 294 SUPERFAMILY SSF161098 55 282 1.83E-51 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01150 e9b72f983fc674a4047f0ea48851413b 193 Pfam PF07811 TadE-like protein 23 64 9.9E-8 T 14-09-2016 IPR012495 TadE-like AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.4E-18 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 299 5.3E-19 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 PANTHER PTHR24220:SF576 5 297 4.4E-155 T 14-09-2016 AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 Pfam PF00005 ABC transporter 24 181 6.0E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 SMART SM00382 32 230 2.2E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 SUPERFAMILY SSF52540 3 252 3.01E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 Gene3D G3DSA:3.40.50.300 1 254 5.7E-69 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03870 9e058b6fc2dd75b2197fd23570d94eca 338 PANTHER PTHR24220 5 297 4.4E-155 T 14-09-2016 AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 Gene3D G3DSA:3.40.50.720 3 191 1.4E-109 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 Gene3D G3DSA:3.40.50.720 302 355 1.4E-109 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 Pfam PF01658 Myo-inositol-1-phosphate synthase 193 301 1.7E-31 T 14-09-2016 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 SUPERFAMILY SSF55347 192 300 1.7E-35 T 14-09-2016 AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 PANTHER PTHR11510:SF9 6 355 3.3E-153 T 14-09-2016 AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 SUPERFAMILY SSF51735 5 187 6.19E-90 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 SUPERFAMILY SSF51735 298 355 6.19E-90 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 PIRSF PIRSF015578 1 365 1.7E-88 T 14-09-2016 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 PANTHER PTHR11510 6 355 3.3E-153 T 14-09-2016 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|UniPathway: UPA00823 AMK01_RS14065 57e33d10cd8b8ef01fe88ccf0a40c899 367 Gene3D G3DSA:3.30.360.10 192 301 1.0E-46 T 14-09-2016 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Gene3D G3DSA:3.40.120.10 253 362 3.6E-39 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 440 2.1E-15 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 3.1E-19 T 14-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 SUPERFAMILY SSF53738 260 368 3.37E-33 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 SUPERFAMILY SSF53738 2 168 1.02E-48 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 PANTHER PTHR22573 3 443 1.1E-163 T 14-09-2016 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 SUPERFAMILY SSF53738 158 259 1.96E-30 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-09-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 PANTHER PTHR22573:SF15 3 443 1.1E-163 T 14-09-2016 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 SUPERFAMILY SSF55957 361 446 4.58E-21 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 367 2.3E-35 T 14-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Gene3D G3DSA:3.30.310.50 363 443 6.1E-15 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Gene3D G3DSA:3.40.120.10 3 152 3.2E-48 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 2.6E-45 T 14-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 4.2E-13 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 4.2E-13 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 4.2E-13 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Gene3D G3DSA:3.40.120.10 178 252 2.5E-26 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 446 47.73 T 14-09-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS17845 69d3c861e9045d2033f7f0fe392a39be 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 1.5E-195 T 14-09-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS08605 1a57844dee3c0169360a9d239d55d585 126 Pfam PF06803 Protein of unknown function (DUF1232) 34 70 1.7E-14 T 14-09-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-09-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 Pfam PF00923 Transaldolase 14 308 1.0E-95 T 14-09-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 PANTHER PTHR10683 1 317 7.5E-166 T 14-09-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 Gene3D G3DSA:3.20.20.70 2 315 9.8E-123 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 SUPERFAMILY SSF51569 1 314 2.3E-106 T 14-09-2016 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 Hamap MF_00492 Transaldolase [tal]. 2 316 50.352 T 14-09-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 TIGRFAM TIGR00874 talAB: transaldolase 4 315 1.4E-142 T 14-09-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-09-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS18960 04aa79fcc72105c2fe20b9351e55fd6b 321 PANTHER PTHR10683:SF18 1 317 7.5E-166 T 14-09-2016 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Pfam PF00488 MutS domain V 658 845 1.8E-85 T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 SUPERFAMILY SSF52540 606 846 5.64E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 SMART SM00534 655 842 6.6E-114 T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Gene3D G3DSA:3.40.1170.10 21 144 4.9E-50 T 14-09-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Pfam PF01624 MutS domain I 27 143 2.2E-42 T 14-09-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Pfam PF05192 MutS domain III 300 598 2.7E-34 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 SUPERFAMILY SSF55271 23 139 1.96E-40 T 14-09-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 SUPERFAMILY SSF53150 141 311 1.44E-33 T 14-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 736 752 - T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Gene3D G3DSA:1.10.1420.10 295 501 5.1E-45 T 14-09-2016 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Gene3D G3DSA:3.30.420.110 150 285 1.2E-27 T 14-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 PIRSF PIRSF037677 18 888 7.6E-151 T 14-09-2016 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 SUPERFAMILY SSF48334 298 603 1.02E-72 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 27 905 1.3E-249 T 14-09-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Gene3D G3DSA:3.40.50.300 606 845 3.0E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 PANTHER PTHR11361:SF86 2 907 0.0 T 14-09-2016 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Pfam PF05188 MutS domain II 152 279 2.9E-26 T 14-09-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 SMART SM00533 314 630 2.2E-79 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 26 899 23.629 T 14-09-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 Pfam PF05190 MutS family domain IV 463 557 4.8E-20 T 14-09-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMK01_RS02140 221a2ff166d8692cb014ff5e1795e3fc 908 PANTHER PTHR11361 2 907 0.0 T 14-09-2016 AMK01_RS02825 9732617a752247042808defed4a3e1fc 291 Gene3D G3DSA:3.40.190.10 161 245 1.1E-12 T 14-09-2016 AMK01_RS02825 9732617a752247042808defed4a3e1fc 291 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 60 287 2.0E-45 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS02825 9732617a752247042808defed4a3e1fc 291 Gene3D G3DSA:3.40.190.10 60 147 1.9E-32 T 14-09-2016 AMK01_RS02825 9732617a752247042808defed4a3e1fc 291 Gene3D G3DSA:3.40.190.10 248 288 1.9E-32 T 14-09-2016 AMK01_RS02825 9732617a752247042808defed4a3e1fc 291 PANTHER PTHR18966 60 286 4.1E-37 T 14-09-2016 AMK01_RS02825 9732617a752247042808defed4a3e1fc 291 SMART SM00062 59 289 1.2E-39 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS02825 9732617a752247042808defed4a3e1fc 291 PANTHER PTHR18966:SF216 60 286 4.1E-37 T 14-09-2016 AMK01_RS02825 9732617a752247042808defed4a3e1fc 291 SUPERFAMILY SSF53850 60 289 3.76E-49 T 14-09-2016 AMK01_RS00395 68538b1516d2d57ee3611d9d35d111d7 336 SUPERFAMILY SSF52283 24 120 1.38E-9 T 14-09-2016 AMK01_RS00395 68538b1516d2d57ee3611d9d35d111d7 336 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 324 1.4E-5 T 14-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK01_RS00395 68538b1516d2d57ee3611d9d35d111d7 336 Gene3D G3DSA:3.40.50.720 119 297 1.2E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00395 68538b1516d2d57ee3611d9d35d111d7 336 PANTHER PTHR10996:SF167 1 335 3.9E-94 T 14-09-2016 AMK01_RS00395 68538b1516d2d57ee3611d9d35d111d7 336 SUPERFAMILY SSF51735 109 297 2.01E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00395 68538b1516d2d57ee3611d9d35d111d7 336 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 146 296 2.2E-46 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK01_RS00395 68538b1516d2d57ee3611d9d35d111d7 336 PANTHER PTHR10996 1 335 3.9E-94 T 14-09-2016 AMK01_RS00395 68538b1516d2d57ee3611d9d35d111d7 336 Gene3D G3DSA:3.40.50.720 21 118 3.3E-10 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09715 804e7ec4f16e7b50f6e08b2057431b8a 247 PANTHER PTHR10291 9 244 8.1E-117 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK01_RS09715 804e7ec4f16e7b50f6e08b2057431b8a 247 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 236 3.9E-83 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK01_RS09715 804e7ec4f16e7b50f6e08b2057431b8a 247 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 9 237 39.747 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK01_RS09715 804e7ec4f16e7b50f6e08b2057431b8a 247 SUPERFAMILY SSF64005 9 231 5.75E-85 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK01_RS09715 804e7ec4f16e7b50f6e08b2057431b8a 247 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 182 199 - T 14-09-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 AMK01_RS09715 804e7ec4f16e7b50f6e08b2057431b8a 247 Gene3D G3DSA:3.40.1180.10 8 242 1.2E-99 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK01_RS09715 804e7ec4f16e7b50f6e08b2057431b8a 247 Pfam PF01255 Putative undecaprenyl diphosphate synthase 16 236 1.5E-78 T 14-09-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK01_RS03010 7fd7f41bd206f6db3d559523751e47d8 388 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 14-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK01_RS03010 7fd7f41bd206f6db3d559523751e47d8 388 SUPERFAMILY SSF53383 7 384 9.95E-99 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS03010 7fd7f41bd206f6db3d559523751e47d8 388 PANTHER PTHR11751 15 387 2.1E-98 T 14-09-2016 AMK01_RS03010 7fd7f41bd206f6db3d559523751e47d8 388 Gene3D G3DSA:3.90.1150.10 275 382 3.3E-23 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS03010 7fd7f41bd206f6db3d559523751e47d8 388 Gene3D G3DSA:3.40.640.10 43 274 2.4E-71 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS03010 7fd7f41bd206f6db3d559523751e47d8 388 Pfam PF00155 Aminotransferase class I and II 40 381 1.6E-54 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 SUPERFAMILY SSF46785 1 91 1.6E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 PANTHER PTHR30154 1 162 2.3E-74 T 14-09-2016 AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 Gene3D G3DSA:1.10.10.10 1 52 4.4E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.4E-15 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.4E-15 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.4E-15 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 SMART SM00344 1 110 9.6E-46 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 Gene3D G3DSA:3.30.70.920 54 137 3.6E-31 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 SUPERFAMILY SSF54909 63 149 2.15E-20 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 PANTHER PTHR30154:SF17 1 162 2.3E-74 T 14-09-2016 AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.8E-19 T 14-09-2016 AMK01_RS12465 f4473bf2101badc6c45aad2c37374156 162 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 4.9E-21 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS12185 bdf7acef6f82bebcccae4253d44c6d88 203 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 203 9.5E-78 T 14-09-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent AMK01_RS12185 bdf7acef6f82bebcccae4253d44c6d88 203 PANTHER PTHR30212:SF4 1 203 2.6E-74 T 14-09-2016 AMK01_RS12185 bdf7acef6f82bebcccae4253d44c6d88 203 SUPERFAMILY SSF50475 29 190 8.95E-24 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS12185 bdf7acef6f82bebcccae4253d44c6d88 203 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 30 122 2.6E-14 T 14-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS12185 bdf7acef6f82bebcccae4253d44c6d88 203 PANTHER PTHR30212 1 203 2.6E-74 T 14-09-2016 AMK01_RS12185 bdf7acef6f82bebcccae4253d44c6d88 203 Gene3D G3DSA:2.30.110.10 23 147 3.6E-24 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS07940 97cc4febbbe2e63407ed2f5a72825356 155 Pfam PF00380 Ribosomal protein S9/S16 35 155 3.2E-46 T 14-09-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMK01_RS07940 97cc4febbbe2e63407ed2f5a72825356 155 Gene3D G3DSA:3.30.230.10 30 155 1.1E-50 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS07940 97cc4febbbe2e63407ed2f5a72825356 155 ProSitePatterns PS00360 Ribosomal protein S9 signature. 94 112 - T 14-09-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AMK01_RS07940 97cc4febbbe2e63407ed2f5a72825356 155 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 26 155 32.421 T 14-09-2016 IPR023035 Ribosomal protein S9, bacterial/plastid AMK01_RS07940 97cc4febbbe2e63407ed2f5a72825356 155 PANTHER PTHR21569 15 155 5.3E-65 T 14-09-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMK01_RS07940 97cc4febbbe2e63407ed2f5a72825356 155 SUPERFAMILY SSF54211 30 155 8.72E-46 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS03775 6299f90c6800508fa3a95ca307bb4ddb 469 SMART SM00530 11 66 7.1E-13 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS03775 6299f90c6800508fa3a95ca307bb4ddb 469 Pfam PF06114 Domain of unknown function (DUF955) 191 312 3.0E-15 T 14-09-2016 IPR010359 HTH domain, IrrE-type AMK01_RS03775 6299f90c6800508fa3a95ca307bb4ddb 469 PIRSF PIRSF019251 1 469 5.5E-132 T 14-09-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 AMK01_RS03775 6299f90c6800508fa3a95ca307bb4ddb 469 Pfam PF01381 Helix-turn-helix 12 66 1.4E-11 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS03775 6299f90c6800508fa3a95ca307bb4ddb 469 SUPERFAMILY SSF47413 5 70 4.56E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS03775 6299f90c6800508fa3a95ca307bb4ddb 469 Gene3D G3DSA:1.10.260.40 3 68 7.7E-15 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS03775 6299f90c6800508fa3a95ca307bb4ddb 469 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 314 466 2.8E-54 T 14-09-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AMK01_RS13985 bab218e16f1ee1014a5194ae24396664 325 SUPERFAMILY SSF53850 21 316 3.51E-68 T 14-09-2016 AMK01_RS13985 bab218e16f1ee1014a5194ae24396664 325 Gene3D G3DSA:3.40.190.10 257 313 1.5E-50 T 14-09-2016 AMK01_RS13985 bab218e16f1ee1014a5194ae24396664 325 Gene3D G3DSA:3.40.190.10 1 122 1.5E-50 T 14-09-2016 AMK01_RS13985 bab218e16f1ee1014a5194ae24396664 325 PANTHER PTHR30006 4 291 3.1E-51 T 14-09-2016 AMK01_RS13985 bab218e16f1ee1014a5194ae24396664 325 Gene3D G3DSA:3.40.190.10 126 256 5.6E-36 T 14-09-2016 AMK01_RS13985 bab218e16f1ee1014a5194ae24396664 325 Pfam PF13343 Bacterial extracellular solute-binding protein 74 298 6.7E-30 T 14-09-2016 AMK01_RS13985 bab218e16f1ee1014a5194ae24396664 325 PIRSF PIRSF002825 1 319 1.5E-59 T 14-09-2016 IPR026045 Ferric binding protein AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 SUPERFAMILY SSF55073 343 501 1.69E-47 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 PANTHER PTHR33121:SF13 516 762 5.7E-85 T 14-09-2016 AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 SMART SM00267 327 500 7.9E-59 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 Gene3D G3DSA:3.30.450.40 159 330 8.0E-21 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 Pfam PF00563 EAL domain 515 750 4.0E-74 T 14-09-2016 IPR001633 EAL domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 Pfam PF13185 GAF domain 198 326 4.5E-12 T 14-09-2016 IPR003018 GAF domain GO:0005515 AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 Pfam PF08448 PAS fold 52 162 3.3E-19 T 14-09-2016 IPR013656 PAS fold-4 AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 PANTHER PTHR33121 516 762 5.7E-85 T 14-09-2016 AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 Gene3D G3DSA:3.30.450.20 44 158 8.9E-16 T 14-09-2016 AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 SMART SM00052 510 755 3.9E-113 T 14-09-2016 IPR001633 EAL domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 PIRSF PIRSF005925 34 767 1.4E-180 T 14-09-2016 AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 SMART SM00065 183 335 5.6E-12 T 14-09-2016 IPR003018 GAF domain GO:0005515 AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 SUPERFAMILY SSF55781 155 327 1.77E-26 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 499 2.0E-47 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 45 165 5.4E-9 T 14-09-2016 IPR000014 PAS domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 SMART SM00091 44 111 4.9E-4 T 14-09-2016 IPR000014 PAS domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 SUPERFAMILY SSF55785 49 162 1.27E-15 T 14-09-2016 IPR000014 PAS domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 SUPERFAMILY SSF141868 515 765 5.75E-89 T 14-09-2016 IPR001633 EAL domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 Gene3D G3DSA:3.20.20.450 515 762 7.9E-102 T 14-09-2016 IPR001633 EAL domain AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 Gene3D G3DSA:3.30.70.270 339 500 3.1E-52 T 14-09-2016 AMK01_RS05965 110eaacf27a65880d70944b91ddf1ec5 770 Pfam PF00990 Diguanylate cyclase, GGDEF domain 338 496 1.4E-47 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS11835 f016d3903d4122aada2acac14736812b 309 SUPERFAMILY SSF56601 3 307 2.89E-117 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS11835 f016d3903d4122aada2acac14736812b 309 Gene3D G3DSA:3.40.710.10 2 307 7.2E-124 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS11835 f016d3903d4122aada2acac14736812b 309 Hamap MF_00313 Glutaminase [glsA]. 4 307 47.107 T 14-09-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 AMK01_RS11835 f016d3903d4122aada2acac14736812b 309 PANTHER PTHR12544 2 307 1.3E-138 T 14-09-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 AMK01_RS11835 f016d3903d4122aada2acac14736812b 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 307 3.6E-129 T 14-09-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 AMK01_RS11835 f016d3903d4122aada2acac14736812b 309 Pfam PF04960 Glutaminase 22 307 8.6E-117 T 14-09-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 AMK01_RS07585 4e2869f7318d3a8c6d1839a695dbdd4c 374 PANTHER PTHR21716 12 339 1.2E-68 T 14-09-2016 IPR002549 Transmembrane protein TqsA-like AMK01_RS07585 4e2869f7318d3a8c6d1839a695dbdd4c 374 Pfam PF01594 Domain of unknown function DUF20 17 343 5.8E-67 T 14-09-2016 IPR002549 Transmembrane protein TqsA-like AMK01_RS13430 1bda756a61e056eefc4c659d292b69a9 237 PANTHER PTHR11403:SF0 53 228 3.9E-25 T 14-09-2016 AMK01_RS13430 1bda756a61e056eefc4c659d292b69a9 237 PANTHER PTHR11403 53 228 3.9E-25 T 14-09-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 AMK01_RS13430 1bda756a61e056eefc4c659d292b69a9 237 Gene3D G3DSA:1.20.120.80 50 221 7.0E-34 T 14-09-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 AMK01_RS13430 1bda756a61e056eefc4c659d292b69a9 237 SUPERFAMILY SSF81452 2 223 2.75E-35 T 14-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMK01_RS13430 1bda756a61e056eefc4c659d292b69a9 237 Pfam PF00510 Cytochrome c oxidase subunit III 90 225 3.1E-14 T 14-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 Gene3D G3DSA:3.40.50.150 86 281 1.6E-64 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 Gene3D G3DSA:1.10.155.10 15 85 2.3E-20 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PANTHER PTHR24422 19 269 2.4E-92 T 14-09-2016 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 SMART SM00138 18 285 1.2E-86 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 SUPERFAMILY SSF47757 12 86 3.14E-17 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 279 1.2E-57 T 14-09-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PIRSF PIRSF000410 1 285 3.0E-95 T 14-09-2016 IPR026024 Chemotaxis protein methyltransferase CheR AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 8.8E-43 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PRINTS PR00996 Glutamate methyltransferase family signature 153 169 8.8E-43 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PRINTS PR00996 Glutamate methyltransferase family signature 244 267 8.8E-43 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PRINTS PR00996 Glutamate methyltransferase family signature 40 53 8.8E-43 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PRINTS PR00996 Glutamate methyltransferase family signature 225 239 8.8E-43 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 8.8E-43 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 Pfam PF03705 CheR methyltransferase, all-alpha domain 20 70 1.3E-14 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 SUPERFAMILY SSF53335 87 281 3.66E-48 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS18150 8ee401e581dc1fbd01d1dcf4bad194c8 285 PANTHER PTHR24422:SF11 19 269 2.4E-92 T 14-09-2016 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 Gene3D G3DSA:1.10.287.950 520 724 2.6E-50 T 14-09-2016 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 SUPERFAMILY SSF158472 373 421 9.55E-9 T 14-09-2016 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 560 751 2.9E-51 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 PANTHER PTHR32089:SF63 338 406 1.3E-95 T 14-09-2016 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 PANTHER PTHR32089:SF63 487 755 1.3E-95 T 14-09-2016 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 Pfam PF00672 HAMP domain 353 419 4.2E-10 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 PANTHER PTHR32089 487 755 1.3E-95 T 14-09-2016 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 PANTHER PTHR32089 338 406 1.3E-95 T 14-09-2016 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 SUPERFAMILY SSF58104 472 753 4.32E-62 T 14-09-2016 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 SMART SM00283 505 752 7.6E-80 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 SMART SM00304 452 504 0.23 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS17940 358a7643060f3ba5b9fb3a02c8106d77 771 SMART SM00304 371 424 9.9E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS09660 033c00fd0175cb41281bca70db8d26d9 238 SUPERFAMILY SSF51695 12 217 1.44E-50 T 14-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMK01_RS09660 033c00fd0175cb41281bca70db8d26d9 238 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 14 218 1.0E-21 T 14-09-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMK01_RS09660 033c00fd0175cb41281bca70db8d26d9 238 Gene3D G3DSA:3.20.20.190 12 222 6.1E-48 T 14-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMK01_RS09660 033c00fd0175cb41281bca70db8d26d9 238 PANTHER PTHR23344 12 220 7.5E-39 T 14-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 AMK01_RS02625 5feed25deb68955023a229d690f14e7d 241 Pfam PF03932 CutC family 4 201 4.2E-69 T 14-09-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 AMK01_RS02625 5feed25deb68955023a229d690f14e7d 241 PANTHER PTHR12598:SF0 1 238 8.0E-76 T 14-09-2016 AMK01_RS02625 5feed25deb68955023a229d690f14e7d 241 Gene3D G3DSA:3.20.20.380 3 238 1.4E-75 T 14-09-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 AMK01_RS02625 5feed25deb68955023a229d690f14e7d 241 PANTHER PTHR12598 1 238 8.0E-76 T 14-09-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 AMK01_RS02625 5feed25deb68955023a229d690f14e7d 241 SUPERFAMILY SSF110395 3 237 7.98E-59 T 14-09-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 AMK01_RS00360 2267af0120ae37b1762fbe0df8d35a73 327 PANTHER PTHR10366:SF39 4 317 1.7E-97 T 14-09-2016 AMK01_RS00360 2267af0120ae37b1762fbe0df8d35a73 327 Gene3D G3DSA:3.40.50.720 4 170 7.7E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00360 2267af0120ae37b1762fbe0df8d35a73 327 Gene3D G3DSA:3.90.25.10 255 317 2.1E-37 T 14-09-2016 AMK01_RS00360 2267af0120ae37b1762fbe0df8d35a73 327 Gene3D G3DSA:3.90.25.10 171 223 2.1E-37 T 14-09-2016 AMK01_RS00360 2267af0120ae37b1762fbe0df8d35a73 327 SUPERFAMILY SSF51735 1 315 8.12E-84 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00360 2267af0120ae37b1762fbe0df8d35a73 327 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 5 317 9.2E-117 T 14-09-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 AMK01_RS00360 2267af0120ae37b1762fbe0df8d35a73 327 PANTHER PTHR10366 4 317 1.7E-97 T 14-09-2016 AMK01_RS00360 2267af0120ae37b1762fbe0df8d35a73 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 252 1.1E-53 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 SMART SM00344 6 115 5.5E-42 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.1E-18 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.1E-18 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.1E-18 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 Gene3D G3DSA:3.30.70.920 59 142 4.1E-22 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 SUPERFAMILY SSF46785 6 66 1.01E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 SUPERFAMILY SSF54909 66 150 1.02E-15 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 PANTHER PTHR30154 1 148 1.0E-58 T 14-09-2016 AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 4.1E-21 T 14-09-2016 AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 PANTHER PTHR30154:SF22 1 148 1.0E-58 T 14-09-2016 AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 Gene3D G3DSA:1.10.10.10 7 57 3.2E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15210 7722e8142ad31b450415b0363e15a50d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 73 145 6.0E-16 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 79 - T 14-09-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 274 51.305 T 14-09-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 Gene3D G3DSA:3.40.50.150 6 212 1.7E-64 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 275 2.6E-68 T 14-09-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 Gene3D G3DSA:1.10.8.100 215 275 2.9E-23 T 14-09-2016 IPR023165 rRNA adenine dimethylase-like AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 SUPERFAMILY SSF53335 16 274 4.58E-74 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 274 1.5E-45 T 14-09-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 PANTHER PTHR11727 4 273 9.7E-96 T 14-09-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMK01_RS07420 5f27aaa754ced2fdd1f161c41ee81a4c 275 SMART SM00650 35 211 5.3E-67 T 14-09-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 3.6E-9 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 3.6E-9 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 PANTHER PTHR11751 21 88 3.8E-25 T 14-09-2016 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 PANTHER PTHR11751 137 160 3.8E-25 T 14-09-2016 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 85 2.9E-19 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 Pfam PF07702 UTRA domain 109 244 2.3E-34 T 14-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 SUPERFAMILY SSF46785 17 88 1.45E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 SMART SM00345 26 85 1.4E-21 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 Gene3D G3DSA:1.10.10.10 18 80 4.5E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 PANTHER PTHR11751:SF333 21 88 3.8E-25 T 14-09-2016 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 PANTHER PTHR11751:SF333 137 160 3.8E-25 T 14-09-2016 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 Gene3D G3DSA:3.40.1410.10 81 250 9.5E-45 T 14-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 SMART SM00866 108 244 3.0E-34 T 14-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK01_RS14885 c1bffddf7f5036ab0a08a6559e66cba9 254 SUPERFAMILY SSF64288 73 250 4.55E-46 T 14-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SUPERFAMILY SSF55785 49 161 4.36E-19 T 14-09-2016 IPR000014 PAS domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SUPERFAMILY SSF141868 494 736 9.15E-67 T 14-09-2016 IPR001633 EAL domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SMART SM00091 39 108 0.31 T 14-09-2016 IPR000014 PAS domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SMART SM00091 170 238 0.62 T 14-09-2016 IPR000014 PAS domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SUPERFAMILY SSF55073 322 479 3.53E-45 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SMART SM00052 488 731 3.2E-89 T 14-09-2016 IPR001633 EAL domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 Pfam PF00563 EAL domain 496 726 7.0E-60 T 14-09-2016 IPR001633 EAL domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 170 292 1.3E-6 T 14-09-2016 IPR000014 PAS domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 63 165 1.3E-9 T 14-09-2016 IPR000014 PAS domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 Pfam PF08447 PAS fold 63 151 7.8E-18 T 14-09-2016 IPR013655 PAS fold-3 GO:0005515 AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 Pfam PF08447 PAS fold 193 277 1.7E-12 T 14-09-2016 IPR013655 PAS fold-3 GO:0005515 AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 PANTHER PTHR33121:SF1 492 762 2.6E-52 T 14-09-2016 AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SMART SM00086 244 285 3.8 T 14-09-2016 IPR001610 PAC motif AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SMART SM00086 115 158 3.5E-6 T 14-09-2016 IPR001610 PAC motif AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 313 476 5.1E-43 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SUPERFAMILY SSF55785 155 283 1.92E-18 T 14-09-2016 IPR000014 PAS domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 PANTHER PTHR33121 492 762 2.6E-52 T 14-09-2016 AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 474 1.8E-42 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 Gene3D G3DSA:3.20.20.450 491 736 7.0E-71 T 14-09-2016 IPR001633 EAL domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 Gene3D G3DSA:3.30.450.20 32 162 5.4E-28 T 14-09-2016 AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 Gene3D G3DSA:3.30.450.20 163 308 3.5E-22 T 14-09-2016 AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 SMART SM00267 306 478 2.9E-51 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS11665 d07c938a8731d5f679416b2c558fd5c7 765 Gene3D G3DSA:3.30.70.270 319 484 9.3E-53 T 14-09-2016 AMK01_RS20505 6e66851ee45d53bee6f9d559854ae6f8 311 PANTHER PTHR30465:SF10 23 310 1.7E-113 T 14-09-2016 AMK01_RS20505 6e66851ee45d53bee6f9d559854ae6f8 311 PANTHER PTHR30465 23 310 1.7E-113 T 14-09-2016 AMK01_RS20505 6e66851ee45d53bee6f9d559854ae6f8 311 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 36 84 6.9E-13 T 14-09-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMK01_RS20505 6e66851ee45d53bee6f9d559854ae6f8 311 Gene3D G3DSA:1.10.3720.10 102 306 4.2E-31 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20505 6e66851ee45d53bee6f9d559854ae6f8 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 307 1.1E-30 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20505 6e66851ee45d53bee6f9d559854ae6f8 311 SUPERFAMILY SSF161098 102 290 2.88E-29 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02995 a0e31a1dd2896ec4e29b082bfc3b2d82 185 Gene3D G3DSA:1.10.357.10 60 181 7.3E-22 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS02995 a0e31a1dd2896ec4e29b082bfc3b2d82 185 SUPERFAMILY SSF48498 79 181 1.22E-15 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS02995 a0e31a1dd2896ec4e29b082bfc3b2d82 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 65 1.2E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02995 a0e31a1dd2896ec4e29b082bfc3b2d82 185 Gene3D G3DSA:1.10.10.60 10 58 5.4E-19 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02995 a0e31a1dd2896ec4e29b082bfc3b2d82 185 SUPERFAMILY SSF46689 11 71 2.52E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02995 a0e31a1dd2896ec4e29b082bfc3b2d82 185 PANTHER PTHR30055 3 164 6.1E-36 T 14-09-2016 AMK01_RS02995 a0e31a1dd2896ec4e29b082bfc3b2d82 185 Pfam PF16859 Bacterial transcriptional repressor C-terminal 78 179 2.7E-17 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS02995 a0e31a1dd2896ec4e29b082bfc3b2d82 185 PANTHER PTHR30055:SF67 3 164 6.1E-36 T 14-09-2016 AMK01_RS10455 7ff7c4c5a382a0f730bcfb7039ca138d 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 260 6.5E-19 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10455 7ff7c4c5a382a0f730bcfb7039ca138d 280 SUPERFAMILY SSF161098 69 255 3.4E-23 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10455 7ff7c4c5a382a0f730bcfb7039ca138d 280 Gene3D G3DSA:1.10.3720.10 20 260 1.3E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10455 7ff7c4c5a382a0f730bcfb7039ca138d 280 PANTHER PTHR30151:SF9 20 272 2.5E-77 T 14-09-2016 AMK01_RS10455 7ff7c4c5a382a0f730bcfb7039ca138d 280 PANTHER PTHR30151 20 272 2.5E-77 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 SUPERFAMILY SSF158472 359 407 4.45E-6 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 PANTHER PTHR11920:SF341 441 773 2.0E-76 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 SUPERFAMILY SSF55785 414 536 8.79E-7 T 14-09-2016 IPR000014 PAS domain AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 Gene3D G3DSA:3.30.70.1230 582 770 1.4E-49 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 Gene3D G3DSA:3.30.450.20 415 537 1.9E-10 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 SMART SM00044 546 749 5.0E-15 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 PANTHER PTHR11920 441 773 2.0E-76 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 PANTHER PTHR11920:SF341 799 816 2.0E-76 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 PANTHER PTHR11920:SF341 1 10 2.0E-76 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 SUPERFAMILY SSF55073 580 768 3.61E-57 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 583 765 1.2E-33 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 SMART SM00304 359 411 9.6E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 Pfam PF00672 HAMP domain 340 407 3.0E-10 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 Pfam PF12860 PAS fold 428 543 8.0E-24 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 PANTHER PTHR11920 799 816 2.0E-76 T 14-09-2016 AMK01_RS05390 f51ecd4cbab6d4fee83948052b2b0ecb 822 PANTHER PTHR11920 1 10 2.0E-76 T 14-09-2016 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 380 398 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 275 296 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 345 366 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 131 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 408 427 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 31 56 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 79 102 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 336 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PRINTS PR01165 Cytochrome c oxidase subunit I signature 458 479 3.3E-69 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 32 555 1.8E-202 T 14-09-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 Gene3D G3DSA:1.20.210.10 24 578 6.6E-174 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 41 505 4.3E-131 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PANTHER PTHR10422 17 573 1.3E-234 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 SUPERFAMILY SSF81442 28 551 1.57E-152 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 277 331 - T 14-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS13435 d5d695c523b6c1c675491ace050995ac 592 PANTHER PTHR10422:SF6 17 573 1.3E-234 T 14-09-2016 AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 356 1.3E-40 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 PANTHER PTHR33121 358 617 2.9E-88 T 14-09-2016 AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 Pfam PF12860 PAS fold 80 193 8.9E-17 T 14-09-2016 AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 PANTHER PTHR33121:SF13 358 617 2.9E-88 T 14-09-2016 AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 SMART SM00052 370 612 5.5E-118 T 14-09-2016 IPR001633 EAL domain AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 SUPERFAMILY SSF141868 376 617 1.27E-90 T 14-09-2016 IPR001633 EAL domain AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 SMART SM00267 189 360 1.5E-47 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 Gene3D G3DSA:3.30.70.270 201 368 3.0E-47 T 14-09-2016 AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 Gene3D G3DSA:3.30.450.20 72 188 9.2E-9 T 14-09-2016 AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 SUPERFAMILY SSF55785 70 127 1.13E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 SUPERFAMILY SSF55073 205 361 4.71E-39 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 Gene3D G3DSA:3.20.20.450 373 617 5.3E-100 T 14-09-2016 IPR001633 EAL domain AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 Pfam PF00563 EAL domain 376 607 9.6E-73 T 14-09-2016 IPR001633 EAL domain AMK01_RS07135 9a0db5cf6bf393588fa4c8ea684e5f59 634 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 199 357 1.3E-31 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 Pfam PF00037 4Fe-4S binding domain 34 56 3.4E-7 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 PANTHER PTHR11938:SF101 1 82 3.6E-37 T 14-09-2016 AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 Gene3D G3DSA:3.30.70.20 3 81 2.3E-20 T 14-09-2016 AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.4E-19 T 14-09-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.4E-19 T 14-09-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.4E-19 T 14-09-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 PANTHER PTHR11938 1 82 3.6E-37 T 14-09-2016 AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 SUPERFAMILY SSF54862 3 107 2.62E-25 T 14-09-2016 AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS20660 74aedf9b3af690ec3dfefb0feefc5405 112 Pfam PF11953 Domain of unknown function (DUF3470) 65 105 1.2E-19 T 14-09-2016 IPR022569 Ferredoxin, C-terminal AMK01_RS04085 5e2f918fa6ed0415c54df26ddf026434 213 PANTHER PTHR30055:SF92 12 153 4.6E-14 T 14-09-2016 AMK01_RS04085 5e2f918fa6ed0415c54df26ddf026434 213 SUPERFAMILY SSF46689 12 96 1.75E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS04085 5e2f918fa6ed0415c54df26ddf026434 213 Gene3D G3DSA:1.10.357.10 12 186 4.5E-25 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS04085 5e2f918fa6ed0415c54df26ddf026434 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.6E-6 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS04085 5e2f918fa6ed0415c54df26ddf026434 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.6E-6 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS04085 5e2f918fa6ed0415c54df26ddf026434 213 PANTHER PTHR30055 12 153 4.6E-14 T 14-09-2016 AMK01_RS04085 5e2f918fa6ed0415c54df26ddf026434 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 8.3E-12 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02910 d6105bcfc6a3f2dce9926e9230163615 241 PIRSF PIRSF000887 21 240 5.5E-58 T 14-09-2016 IPR024173 Phosphoesterase, MJ0037 AMK01_RS02910 d6105bcfc6a3f2dce9926e9230163615 241 PANTHER PTHR39323:SF1 20 232 1.4E-31 T 14-09-2016 AMK01_RS02910 d6105bcfc6a3f2dce9926e9230163615 241 Pfam PF00149 Calcineurin-like phosphoesterase 44 159 1.1E-6 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS02910 d6105bcfc6a3f2dce9926e9230163615 241 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 22 219 9.2E-65 T 14-09-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated AMK01_RS02910 d6105bcfc6a3f2dce9926e9230163615 241 PANTHER PTHR39323 20 232 1.4E-31 T 14-09-2016 AMK01_RS02910 d6105bcfc6a3f2dce9926e9230163615 241 Gene3D G3DSA:3.60.21.10 43 133 1.4E-9 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS02910 d6105bcfc6a3f2dce9926e9230163615 241 SUPERFAMILY SSF56300 43 137 4.4E-14 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 Gene3D G3DSA:3.40.50.300 2 223 5.3E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 Gene3D G3DSA:3.40.50.300 267 474 2.0E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 SUPERFAMILY SSF52540 3 223 2.82E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 PANTHER PTHR24220 7 382 1.5E-146 T 14-09-2016 AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 SUPERFAMILY SSF52540 267 480 4.16E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 SMART SM00382 30 218 1.2E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 SMART SM00382 279 471 2.4E-5 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 PANTHER PTHR24220:SF416 7 382 1.5E-146 T 14-09-2016 AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 Pfam PF00005 ABC transporter 271 422 2.9E-23 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12265 155ac1df795587d6bf48dc3f5f57cf1f 492 Pfam PF00005 ABC transporter 21 170 4.5E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 Pfam PF00578 AhpC/TSA family 5 143 1.0E-30 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 PIRSF PIRSF000239 1 216 6.2E-74 T 14-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 PANTHER PTHR10681 128 217 1.4E-78 T 14-09-2016 AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 PANTHER PTHR10681 3 111 1.4E-78 T 14-09-2016 AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 PANTHER PTHR10681:SF99 128 217 1.4E-78 T 14-09-2016 AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 SUPERFAMILY SSF52833 3 216 1.32E-67 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 Gene3D G3DSA:3.40.30.10 4 166 1.5E-58 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 165 201 1.5E-13 T 14-09-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 PANTHER PTHR10681:SF99 3 111 1.4E-78 T 14-09-2016 AMK01_RS09025 09198f725d5dda343ca9a6cfb47e2b53 219 Gene3D G3DSA:3.30.1020.10 167 218 6.7E-25 T 14-09-2016 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 PANTHER PTHR30290 1 359 3.2E-160 T 14-09-2016 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 PANTHER PTHR30290:SF2 387 595 3.2E-160 T 14-09-2016 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 PANTHER PTHR30290:SF2 1 359 3.2E-160 T 14-09-2016 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 Gene3D G3DSA:3.10.105.10 331 566 1.7E-34 T 14-09-2016 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 SUPERFAMILY SSF53850 47 595 1.14E-113 T 14-09-2016 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 103 511 3.9E-78 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 Gene3D G3DSA:3.40.190.10 217 330 4.5E-24 T 14-09-2016 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 PIRSF PIRSF002741 6 600 3.1E-90 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 Gene3D G3DSA:3.90.76.10 61 216 4.9E-35 T 14-09-2016 AMK01_RS10770 e4e7089365c2773bdde3a5faa6695a61 600 PANTHER PTHR30290 387 595 3.2E-160 T 14-09-2016 AMK01_RS17315 655e5f669f975a7cb5e74a91b394acd4 157 Gene3D G3DSA:2.60.120.10 18 141 5.4E-27 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS17315 655e5f669f975a7cb5e74a91b394acd4 157 Pfam PF07883 Cupin domain 55 125 4.4E-11 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS17315 655e5f669f975a7cb5e74a91b394acd4 157 SUPERFAMILY SSF51182 8 137 1.18E-26 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS01550 027a74029abc8de949f3fe844616521a 335 PANTHER PTHR10859 7 308 3.9E-79 T 14-09-2016 AMK01_RS01550 027a74029abc8de949f3fe844616521a 335 Pfam PF00535 Glycosyl transferase family 2 13 165 3.9E-15 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS01550 027a74029abc8de949f3fe844616521a 335 Gene3D G3DSA:3.90.550.10 9 135 1.9E-14 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS01550 027a74029abc8de949f3fe844616521a 335 SUPERFAMILY SSF53448 7 252 1.13E-31 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS01550 027a74029abc8de949f3fe844616521a 335 PANTHER PTHR10859:SF95 7 308 3.9E-79 T 14-09-2016 AMK01_RS08545 71ea2e1d08e2c9f6ac33600e3ccf47e6 158 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 149 2.9E-36 T 14-09-2016 IPR021131 Ribosomal protein L18e/L15P AMK01_RS08545 71ea2e1d08e2c9f6ac33600e3ccf47e6 158 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 20.241 T 14-09-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AMK01_RS08545 71ea2e1d08e2c9f6ac33600e3ccf47e6 158 ProSitePatterns PS00475 Ribosomal protein L15 signature. 115 145 - T 14-09-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08545 71ea2e1d08e2c9f6ac33600e3ccf47e6 158 PANTHER PTHR12934 1 151 1.3E-69 T 14-09-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS08545 71ea2e1d08e2c9f6ac33600e3ccf47e6 158 Gene3D G3DSA:3.100.10.10 32 151 1.2E-27 T 14-09-2016 AMK01_RS08545 71ea2e1d08e2c9f6ac33600e3ccf47e6 158 SUPERFAMILY SSF52080 4 150 2.75E-44 T 14-09-2016 IPR021131 Ribosomal protein L18e/L15P AMK01_RS08545 71ea2e1d08e2c9f6ac33600e3ccf47e6 158 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 148 2.7E-47 T 14-09-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 PIRSF PIRSF001365 1 294 1.3E-93 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 SMART SM01130 1 291 8.4E-146 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 Gene3D G3DSA:3.20.20.70 1 293 3.5E-114 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 8.5E-35 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 8.5E-35 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 8.5E-35 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 8.5E-35 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-09-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 282 7.0E-93 T 14-09-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 62.456 T 14-09-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 PANTHER PTHR12128 1 294 1.3E-123 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 SUPERFAMILY SSF51569 1 293 1.78E-102 T 14-09-2016 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 164 - T 14-09-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 PANTHER PTHR12128:SF34 1 294 1.3E-123 T 14-09-2016 AMK01_RS07050 dd34bb671a637dc521910d987671eb1e 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 276 5.7E-88 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 PIRSF PIRSF006443 1 168 1.5E-63 T 14-09-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 74 87 - T 14-09-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 PANTHER PTHR10192 6 168 6.9E-79 T 14-09-2016 AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 PANTHER PTHR10192:SF18 6 168 6.9E-79 T 14-09-2016 AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 153 1.9E-39 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 SUPERFAMILY SSF53218 7 171 3.66E-50 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 Gene3D G3DSA:3.40.980.10 7 170 3.0E-54 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 10 171 2.1E-79 T 14-09-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 SMART SM00852 16 160 1.6E-37 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS04445 cb9da1b8adadfb94cc45c523811614a8 183 Pfam PF00994 Probable molybdopterin binding domain 16 157 6.2E-41 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS15775 a19c6373d02fe4f389b64c1da3223ca8 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 79 2.1E-12 T 14-09-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMK01_RS15775 a19c6373d02fe4f389b64c1da3223ca8 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 303 1.1E-25 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15775 a19c6373d02fe4f389b64c1da3223ca8 305 PANTHER PTHR30465 21 305 2.2E-114 T 14-09-2016 AMK01_RS15775 a19c6373d02fe4f389b64c1da3223ca8 305 SUPERFAMILY SSF161098 99 288 2.35E-26 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15775 a19c6373d02fe4f389b64c1da3223ca8 305 PANTHER PTHR30465:SF9 21 305 2.2E-114 T 14-09-2016 AMK01_RS15775 a19c6373d02fe4f389b64c1da3223ca8 305 Gene3D G3DSA:1.10.3720.10 98 302 1.7E-26 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PANTHER PTHR10992 58 191 8.0E-67 T 14-09-2016 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 Gene3D G3DSA:3.40.50.1820 58 346 1.6E-53 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PANTHER PTHR10992:SF764 58 191 8.0E-67 T 14-09-2016 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PANTHER PTHR10992 209 274 8.0E-67 T 14-09-2016 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PANTHER PTHR10992 290 350 8.0E-67 T 14-09-2016 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 Pfam PF00561 alpha/beta hydrolase fold 78 204 1.6E-20 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 SUPERFAMILY SSF53474 58 346 1.01E-59 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PRINTS PR00412 Epoxide hydrolase signature 325 347 9.5E-16 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PRINTS PR00412 Epoxide hydrolase signature 166 179 9.5E-16 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PRINTS PR00412 Epoxide hydrolase signature 291 307 9.5E-16 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PRINTS PR00412 Epoxide hydrolase signature 152 165 9.5E-16 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PRINTS PR00412 Epoxide hydrolase signature 104 119 9.5E-16 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PRINTS PR00412 Epoxide hydrolase signature 84 102 9.5E-16 T 14-09-2016 IPR000639 Epoxide hydrolase-like GO:0003824 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PANTHER PTHR10992:SF764 209 274 8.0E-67 T 14-09-2016 AMK01_RS12335 03f2af1387341511dbefbbd295d0ed67 350 PANTHER PTHR10992:SF764 290 350 8.0E-67 T 14-09-2016 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 297 353 2.7E-13 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 SUPERFAMILY SSF47384 296 355 2.0E-12 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 458 3.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 518 3.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 537 3.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 494 3.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 PANTHER PTHR22617:SF20 9 670 6.3E-203 T 14-09-2016 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 SUPERFAMILY SSF55874 356 538 2.75E-39 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 SUPERFAMILY SSF50341 539 669 1.7E-30 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 539 7.8E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 SUPERFAMILY SSF47226 7 121 2.36E-26 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Gene3D G3DSA:1.20.120.160 7 139 9.9E-34 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Gene3D G3DSA:3.30.565.10 356 539 7.5E-36 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Gene3D G3DSA:2.30.30.40 625 669 4.2E-21 T 14-09-2016 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Gene3D G3DSA:2.30.30.40 540 561 4.2E-21 T 14-09-2016 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 SMART SM00260 532 669 1.8E-32 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Gene3D G3DSA:1.10.287.560 297 355 1.3E-17 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Pfam PF01584 CheW-like domain 545 670 6.3E-24 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 SMART SM01231 294 354 8.0E-17 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 SMART SM00387 399 540 4.2E-25 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 SMART SM00073 3 100 4.2E-25 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Pfam PF01627 Hpt domain 8 98 7.7E-16 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 PANTHER PTHR22617 9 670 6.3E-203 T 14-09-2016 AMK01_RS18175 7bf97f21aa8b3c5edf7e729ebfbfc8ff 683 Gene3D G3DSA:2.40.50.180 563 624 6.8E-11 T 14-09-2016 AMK01_RS12715 5847a3317cc01bd5aff067c1bfa4ace0 316 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 305 2.6E-64 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS12715 5847a3317cc01bd5aff067c1bfa4ace0 316 PANTHER PTHR12304 2 315 8.7E-87 T 14-09-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AMK01_RS12715 5847a3317cc01bd5aff067c1bfa4ace0 316 Gene3D G3DSA:3.90.245.10 1 313 1.0E-91 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS12715 5847a3317cc01bd5aff067c1bfa4ace0 316 PANTHER PTHR12304:SF4 2 315 8.7E-87 T 14-09-2016 AMK01_RS12715 5847a3317cc01bd5aff067c1bfa4ace0 316 SUPERFAMILY SSF53590 1 313 7.85E-86 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS16905 2ad579142ba768a404ee58c80dc15f85 136 ProSitePatterns PS00380 Rhodanese signature 1. 55 66 - T 14-09-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AMK01_RS16905 2ad579142ba768a404ee58c80dc15f85 136 SMART SM00450 30 127 1.8E-12 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS16905 2ad579142ba768a404ee58c80dc15f85 136 SUPERFAMILY SSF52821 16 130 5.24E-25 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS16905 2ad579142ba768a404ee58c80dc15f85 136 Pfam PF00581 Rhodanese-like domain 32 123 7.8E-11 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS16905 2ad579142ba768a404ee58c80dc15f85 136 Gene3D G3DSA:3.40.250.10 29 130 8.5E-19 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 Gene3D G3DSA:3.40.50.2300 2 145 6.0E-32 T 14-09-2016 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 SUPERFAMILY SSF52540 138 378 4.64E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 SMART SM00448 3 114 2.1E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 Pfam PF02954 Bacterial regulatory protein, Fis family 432 472 2.8E-13 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 PANTHER PTHR32071 1 483 4.7E-200 T 14-09-2016 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 5 472 6.3E-211 T 14-09-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 SMART SM00382 158 301 1.4E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 Gene3D G3DSA:1.10.8.60 311 386 1.1E-23 T 14-09-2016 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 455 475 8.5E-13 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 455 8.5E-13 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 Gene3D G3DSA:1.10.10.60 407 473 1.5E-20 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 SUPERFAMILY SSF46689 422 474 1.3E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 SUPERFAMILY SSF46689 350 393 1.3E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 14-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 14-09-2016 IPR025944 Sigma-54 interaction domain, conserved site AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 SUPERFAMILY SSF52172 4 182 6.26E-40 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 14-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 PANTHER PTHR32071:SF15 1 483 4.7E-200 T 14-09-2016 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 Pfam PF00158 Sigma-54 interaction domain 138 304 2.5E-70 T 14-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 Gene3D G3DSA:3.40.50.300 146 310 1.5E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09870 3c6165f91b06eb8e2794a4f9388f6fb5 483 Pfam PF00072 Response regulator receiver domain 5 113 1.6E-23 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS11305 930e82ccd8105d28518ef1fd38895a7a 204 Pfam PF07310 PAS domain 1 136 1.9E-40 T 14-09-2016 IPR009922 Protein of unknown function DUF1457 AMK01_RS11305 930e82ccd8105d28518ef1fd38895a7a 204 PIRSF PIRSF031878 1 184 5.2E-52 T 14-09-2016 IPR009922 Protein of unknown function DUF1457 AMK01_RS13685 eb08f6bb36d971fd8b6ac33ccd073070 287 PANTHER PTHR12715 1 287 1.4E-125 T 14-09-2016 AMK01_RS13685 eb08f6bb36d971fd8b6ac33ccd073070 287 Pfam PF00892 EamA-like transporter family 149 280 3.7E-12 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS13685 eb08f6bb36d971fd8b6ac33ccd073070 287 Pfam PF00892 EamA-like transporter family 8 130 1.2E-12 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS13685 eb08f6bb36d971fd8b6ac33ccd073070 287 SUPERFAMILY SSF103481 182 281 8.5E-6 T 14-09-2016 AMK01_RS13685 eb08f6bb36d971fd8b6ac33ccd073070 287 PANTHER PTHR12715:SF9 1 287 1.4E-125 T 14-09-2016 AMK01_RS13685 eb08f6bb36d971fd8b6ac33ccd073070 287 SUPERFAMILY SSF103481 44 131 2.29E-7 T 14-09-2016 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 Gene3D G3DSA:3.40.50.2300 63 181 1.9E-13 T 14-09-2016 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.9E-15 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 Gene3D G3DSA:3.40.50.2300 182 326 1.9E-26 T 14-09-2016 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 SUPERFAMILY SSF47413 2 60 4.22E-16 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 Gene3D G3DSA:1.10.260.40 2 59 9.4E-22 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 PANTHER PTHR30146 1 339 1.2E-98 T 14-09-2016 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 6.9E-5 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 6.9E-5 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 PANTHER PTHR30146:SF26 1 339 1.2E-98 T 14-09-2016 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 SMART SM00354 2 72 1.7E-19 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 Pfam PF13407 Periplasmic binding protein domain 64 319 5.4E-40 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS18850 061170aa2186472bb4395b06b93ec94c 340 SUPERFAMILY SSF53822 61 324 4.28E-36 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS19585 eaaeed83372191e587b648d6d7b175a4 308 Pfam PF02153 Prephenate dehydrogenase 20 277 8.8E-77 T 14-09-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AMK01_RS19585 eaaeed83372191e587b648d6d7b175a4 308 PANTHER PTHR21363:SF0 1 289 1.1E-75 T 14-09-2016 AMK01_RS19585 eaaeed83372191e587b648d6d7b175a4 308 SUPERFAMILY SSF51735 7 173 6.21E-53 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19585 eaaeed83372191e587b648d6d7b175a4 308 PANTHER PTHR21363 1 289 1.1E-75 T 14-09-2016 AMK01_RS19585 eaaeed83372191e587b648d6d7b175a4 308 SUPERFAMILY SSF48179 177 287 4.53E-33 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS19585 eaaeed83372191e587b648d6d7b175a4 308 Gene3D G3DSA:3.40.50.720 5 177 6.2E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Gene3D G3DSA:3.40.50.300 19 82 1.1E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Gene3D G3DSA:3.40.50.300 369 478 1.1E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Gene3D G3DSA:3.40.50.300 133 195 1.1E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 SUPERFAMILY SSF52980 1011 1145 6.43E-6 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 23 1167 0.0 T 14-09-2016 IPR014151 DNA helicase, AddA type AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Pfam PF00580 UvrD/REP helicase N-terminal domain 20 479 5.2E-53 T 14-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 PANTHER PTHR11070 17 95 1.7E-89 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 PANTHER PTHR11070 872 916 1.7E-89 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 PANTHER PTHR11070 125 213 1.7E-89 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 PANTHER PTHR11070 571 835 1.7E-89 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 PANTHER PTHR11070 338 549 1.7E-89 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1008 1152 2.8E-12 T 14-09-2016 AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 SUPERFAMILY SSF52540 18 86 1.39E-107 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 SUPERFAMILY SSF52540 873 920 1.39E-107 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 SUPERFAMILY SSF52540 359 824 1.39E-107 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 SUPERFAMILY SSF52540 125 207 1.39E-107 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Pfam PF13361 UvrD-like helicase C-terminal domain 769 894 4.9E-16 T 14-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Gene3D G3DSA:3.40.50.300 499 635 5.7E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Gene3D G3DSA:3.40.50.300 792 917 5.7E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00135 cd626d639c75339a996afd8247486a32 1183 Gene3D G3DSA:1.10.486.10 646 781 2.4E-12 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 PANTHER PTHR10283:SF100 410 579 4.3E-70 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 PANTHER PTHR10283:SF100 344 377 4.3E-70 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 PANTHER PTHR10283 290 312 4.3E-70 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 PANTHER PTHR10283 8 208 4.3E-70 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 PANTHER PTHR10283:SF100 290 312 4.3E-70 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 PANTHER PTHR10283:SF100 8 208 4.3E-70 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 Pfam PF03600 Citrate transporter 16 528 3.3E-33 T 14-09-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 SUPERFAMILY SSF116726 212 283 5.1E-9 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 PANTHER PTHR10283 410 579 4.3E-70 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 PANTHER PTHR10283 344 377 4.3E-70 T 14-09-2016 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 SUPERFAMILY SSF116726 299 377 4.71E-9 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 Gene3D G3DSA:3.30.70.1450 218 286 6.7E-10 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK01_RS17600 1e64131853119864793497aa180c6a1d 580 Gene3D G3DSA:3.30.70.1450 302 379 4.7E-10 T 14-09-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK01_RS09040 1047757545d8b1a4118eb249083a9857 421 Gene3D G3DSA:3.40.50.10180 10 240 4.1E-93 T 14-09-2016 AMK01_RS09040 1047757545d8b1a4118eb249083a9857 421 Pfam PF05161 MOFRL family 308 414 4.4E-36 T 14-09-2016 IPR007835 MOFRL domain AMK01_RS09040 1047757545d8b1a4118eb249083a9857 421 PANTHER PTHR12227 5 421 1.2E-128 T 14-09-2016 AMK01_RS09040 1047757545d8b1a4118eb249083a9857 421 PANTHER PTHR12227:SF0 5 421 1.2E-128 T 14-09-2016 AMK01_RS09040 1047757545d8b1a4118eb249083a9857 421 Pfam PF13660 Domain of unknown function (DUF4147) 10 229 1.1E-74 T 14-09-2016 IPR025286 MOFRL-associated domain AMK01_RS09040 1047757545d8b1a4118eb249083a9857 421 SUPERFAMILY SSF82544 5 420 1.96E-146 T 14-09-2016 AMK01_RS09040 1047757545d8b1a4118eb249083a9857 421 Gene3D G3DSA:3.40.1480.10 241 421 1.2E-70 T 14-09-2016 IPR007835 MOFRL domain AMK01_RS08970 c7435e330c2dd2ce7930afcf36a0a280 345 PANTHER PTHR10314 7 332 2.0E-141 T 14-09-2016 AMK01_RS08970 c7435e330c2dd2ce7930afcf36a0a280 345 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-09-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMK01_RS08970 c7435e330c2dd2ce7930afcf36a0a280 345 Gene3D G3DSA:3.40.50.1100 43 150 3.0E-36 T 14-09-2016 AMK01_RS08970 c7435e330c2dd2ce7930afcf36a0a280 345 Gene3D G3DSA:3.40.50.1100 2 42 1.5E-61 T 14-09-2016 AMK01_RS08970 c7435e330c2dd2ce7930afcf36a0a280 345 Gene3D G3DSA:3.40.50.1100 157 323 1.5E-61 T 14-09-2016 AMK01_RS08970 c7435e330c2dd2ce7930afcf36a0a280 345 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 306 5.6E-66 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS08970 c7435e330c2dd2ce7930afcf36a0a280 345 SUPERFAMILY SSF53686 2 326 1.11E-90 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS08970 c7435e330c2dd2ce7930afcf36a0a280 345 PANTHER PTHR10314:SF83 7 332 2.0E-141 T 14-09-2016 AMK01_RS29840 9f2697c711dc23ef38795db246c05c5c 316 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 16 124 2.3E-17 T 14-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMK01_RS29840 9f2697c711dc23ef38795db246c05c5c 316 PANTHER PTHR10909:SF154 1 316 3.2E-158 T 14-09-2016 AMK01_RS29840 9f2697c711dc23ef38795db246c05c5c 316 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 135 304 1.8E-15 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS29840 9f2697c711dc23ef38795db246c05c5c 316 PANTHER PTHR10909 1 316 3.2E-158 T 14-09-2016 AMK01_RS29840 9f2697c711dc23ef38795db246c05c5c 316 SUPERFAMILY SSF56645 1 145 3.27E-36 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK01_RS29840 9f2697c711dc23ef38795db246c05c5c 316 Gene3D G3DSA:1.20.140.10 122 311 1.3E-44 T 14-09-2016 AMK01_RS29840 9f2697c711dc23ef38795db246c05c5c 316 Gene3D G3DSA:2.40.110.10 15 121 3.4E-27 T 14-09-2016 AMK01_RS29840 9f2697c711dc23ef38795db246c05c5c 316 SUPERFAMILY SSF47203 140 309 1.27E-45 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 SUPERFAMILY SSF53748 22 415 6.71E-146 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 35 45 - T 14-09-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PANTHER PTHR11406 19 417 6.7E-182 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PIRSF PIRSF000724 18 418 8.2E-143 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 Gene3D G3DSA:3.40.50.1270 199 404 5.9E-76 T 14-09-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 30 46 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 157 179 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 187 209 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 51 73 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 332 357 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 210 229 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 369 380 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 129 144 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 PRINTS PR00477 Phosphoglycerate kinase family signature 392 409 2.4E-77 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 Gene3D G3DSA:3.40.50.1260 23 198 3.2E-67 T 14-09-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 24 416 38.731 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS18070 5c7221fa41a68b6d61bfc7f6c782d7d0 418 Pfam PF00162 Phosphoglycerate kinase 26 406 1.8E-141 T 14-09-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 SUPERFAMILY SSF52313 8 230 5.62E-92 T 14-09-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 PRINTS PR00395 Ribosomal protein S2 signature 39 48 2.6E-38 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 PRINTS PR00395 Ribosomal protein S2 signature 89 106 2.6E-38 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 PRINTS PR00395 Ribosomal protein S2 signature 159 176 2.6E-38 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 PRINTS PR00395 Ribosomal protein S2 signature 176 187 2.6E-38 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 PRINTS PR00395 Ribosomal protein S2 signature 197 211 2.6E-38 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 PRINTS PR00395 Ribosomal protein S2 signature 8 26 2.6E-38 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 PANTHER PTHR12534 5 228 2.3E-112 T 14-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 14-09-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 225 2.4E-101 T 14-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 Gene3D G3DSA:1.10.287.610 102 153 1.6E-20 T 14-09-2016 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 235 41.918 T 14-09-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 Pfam PF00318 Ribosomal protein S2 11 225 1.1E-96 T 14-09-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 Gene3D G3DSA:3.40.50.10490 159 238 2.8E-66 T 14-09-2016 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 Gene3D G3DSA:3.40.50.10490 25 101 2.8E-66 T 14-09-2016 AMK01_RS09695 2d58b4dc912e08fc719fbba1a94ab6bf 255 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 14-09-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMK01_RS18720 4342c66927eec2df284a131525171d55 272 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 204 238 3.5E-7 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS18720 4342c66927eec2df284a131525171d55 272 PANTHER PTHR23416 21 269 6.5E-102 T 14-09-2016 AMK01_RS18720 4342c66927eec2df284a131525171d55 272 Gene3D G3DSA:1.10.3130.10 21 152 2.9E-35 T 14-09-2016 AMK01_RS18720 4342c66927eec2df284a131525171d55 272 Gene3D G3DSA:2.160.10.10 154 266 4.2E-30 T 14-09-2016 AMK01_RS18720 4342c66927eec2df284a131525171d55 272 SMART SM00971 22 124 6.0E-32 T 14-09-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK01_RS18720 4342c66927eec2df284a131525171d55 272 Pfam PF06426 Serine acetyltransferase, N-terminal 22 124 4.7E-26 T 14-09-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK01_RS18720 4342c66927eec2df284a131525171d55 272 SUPERFAMILY SSF51161 87 262 7.49E-54 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS18720 4342c66927eec2df284a131525171d55 272 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 92 252 1.2E-67 T 14-09-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK01_RS18720 4342c66927eec2df284a131525171d55 272 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 213 241 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS18720 4342c66927eec2df284a131525171d55 272 PANTHER PTHR23416:SF2 21 269 6.5E-102 T 14-09-2016 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PANTHER PTHR11444:SF3 11 467 4.8E-226 T 14-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 Pfam PF14698 Argininosuccinate lyase C-terminal 374 443 1.4E-25 T 14-09-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 Gene3D G3DSA:1.10.40.30 385 443 1.8E-30 T 14-09-2016 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PANTHER PTHR11444 11 467 4.8E-226 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 Hamap MF_00006 Argininosuccinate lyase [argH]. 13 465 42.805 T 14-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 Gene3D G3DSA:1.10.275.10 13 117 3.3E-40 T 14-09-2016 IPR024083 Fumarase/histidase, N-terminal AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00149 Fumarate lyase superfamily signature 113 131 2.7E-28 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00149 Fumarate lyase superfamily signature 242 269 2.7E-28 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00149 Fumarate lyase superfamily signature 286 302 2.7E-28 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00149 Fumarate lyase superfamily signature 158 176 2.7E-28 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 ProSitePatterns PS00163 Fumarate lyases signature. 286 295 - T 14-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 TIGRFAM TIGR00838 argH: argininosuccinate lyase 14 465 1.5E-183 T 14-09-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00145 Argininosuccinate lyase family signature 204 220 9.9E-67 T 14-09-2016 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00145 Argininosuccinate lyase family signature 153 173 9.9E-67 T 14-09-2016 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00145 Argininosuccinate lyase family signature 286 302 9.9E-67 T 14-09-2016 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00145 Argininosuccinate lyase family signature 112 134 9.9E-67 T 14-09-2016 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00145 Argininosuccinate lyase family signature 321 340 9.9E-67 T 14-09-2016 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 PRINTS PR00145 Argininosuccinate lyase family signature 242 266 9.9E-67 T 14-09-2016 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 SUPERFAMILY SSF48557 14 465 7.7E-145 T 14-09-2016 IPR008948 L-Aspartase-like GO:0003824 AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 Pfam PF00206 Lyase 17 311 4.7E-74 T 14-09-2016 IPR022761 Fumarate lyase, N-terminal AMK01_RS19515 c4fdcf5b7e37afeb0f7d91230d660aca 467 Gene3D G3DSA:1.20.200.10 118 384 6.2E-99 T 14-09-2016 AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 SUPERFAMILY SSF52518 382 582 3.5E-66 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 339 1.1E-40 T 14-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 12 575 7.4E-239 T 14-09-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 PANTHER PTHR18968:SF116 10 578 0.0 T 14-09-2016 AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 176 1.0E-58 T 14-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 PANTHER PTHR18968 10 578 0.0 T 14-09-2016 AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 405 552 5.6E-49 T 14-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 Gene3D G3DSA:3.40.50.970 11 188 1.2E-76 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 SUPERFAMILY SSF52467 196 370 2.76E-62 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 SUPERFAMILY SSF52518 8 187 7.07E-66 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 Gene3D G3DSA:3.40.50.1220 198 369 1.6E-58 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 441 460 - T 14-09-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMK01_RS14310 ee5be479d54c55f0b9542c2215f59c37 596 Gene3D G3DSA:3.40.50.970 374 580 5.5E-71 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 SMART SM00858 285 343 7.6E-10 T 14-09-2016 IPR013974 SAF domain AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 Gene3D G3DSA:3.20.20.70 9 268 4.4E-86 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 PANTHER PTHR23416:SF62 10 294 4.7E-91 T 14-09-2016 AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 PANTHER PTHR23416 10 294 4.7E-91 T 14-09-2016 AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 Pfam PF08666 SAF domain 286 342 1.1E-10 T 14-09-2016 IPR013974 SAF domain AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 Pfam PF03102 NeuB family 38 268 2.1E-75 T 14-09-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 SUPERFAMILY SSF51269 277 342 7.59E-15 T 14-09-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 SUPERFAMILY SSF51569 8 295 1.47E-72 T 14-09-2016 AMK01_RS01335 8c6e678e1370fe641670c6cc1fcca9bc 343 Gene3D G3DSA:3.90.1210.10 283 343 1.5E-15 T 14-09-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 13 491 82.598 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 SMART SM01240 12 478 0.0 T 14-09-2016 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 13 478 8.9E-156 T 14-09-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 SMART SM00116 101 149 4.1E-12 T 14-09-2016 IPR000644 CBS domain AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 SMART SM00116 162 210 5.0E-8 T 14-09-2016 IPR000644 CBS domain AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 SUPERFAMILY SSF51412 221 482 3.66E-120 T 14-09-2016 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 SUPERFAMILY SSF51412 12 95 3.66E-120 T 14-09-2016 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 Pfam PF00571 CBS domain 155 205 1.7E-7 T 14-09-2016 IPR000644 CBS domain AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 Pfam PF00571 CBS domain 98 147 1.9E-12 T 14-09-2016 IPR000644 CBS domain AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 PIRSF PIRSF000130 2 492 7.5E-204 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 SUPERFAMILY SSF54631 98 208 9.98E-32 T 14-09-2016 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 Gene3D G3DSA:3.20.20.70 12 489 1.8E-199 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 PANTHER PTHR11911 12 285 5.0E-224 T 14-09-2016 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 PANTHER PTHR11911 303 489 5.0E-224 T 14-09-2016 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 PANTHER PTHR11911:SF6 12 285 5.0E-224 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 PANTHER PTHR11911:SF6 303 489 5.0E-224 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 13 460 1.7E-196 T 14-09-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK01_RS04070 86c43e76e70b9d28031a8bf07e7c05a1 494 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 299 311 - T 14-09-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 AMK01_RS20390 2316c65576024ac84e3fc7956962b884 267 SUPERFAMILY SSF56219 3 266 6.81E-69 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS20390 2316c65576024ac84e3fc7956962b884 267 PANTHER PTHR22748 5 266 5.6E-77 T 14-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMK01_RS20390 2316c65576024ac84e3fc7956962b884 267 Gene3D G3DSA:3.60.10.10 3 266 3.6E-64 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS20390 2316c65576024ac84e3fc7956962b884 267 PANTHER PTHR22748:SF7 5 266 5.6E-77 T 14-09-2016 AMK01_RS20390 2316c65576024ac84e3fc7956962b884 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 258 6.7E-23 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS20390 2316c65576024ac84e3fc7956962b884 267 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-09-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMK01_RS20390 2316c65576024ac84e3fc7956962b884 267 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 265 4.7E-50 T 14-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMK01_RS09910 a50b4a6be2b956602dcea461313d4404 418 Gene3D G3DSA:3.40.640.10 70 278 2.2E-50 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS09910 a50b4a6be2b956602dcea461313d4404 418 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 27 415 7.4E-125 T 14-09-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AMK01_RS09910 a50b4a6be2b956602dcea461313d4404 418 Gene3D G3DSA:3.90.1150.10 279 415 1.8E-35 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS09910 a50b4a6be2b956602dcea461313d4404 418 SUPERFAMILY SSF53383 25 415 1.14E-93 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS09910 a50b4a6be2b956602dcea461313d4404 418 Pfam PF00155 Aminotransferase class I and II 94 411 3.9E-36 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS09910 a50b4a6be2b956602dcea461313d4404 418 PANTHER PTHR11751:SF422 26 411 1.3E-121 T 14-09-2016 AMK01_RS09910 a50b4a6be2b956602dcea461313d4404 418 PANTHER PTHR11751 26 411 1.3E-121 T 14-09-2016 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 Gene3D G3DSA:3.40.50.7700 3 158 2.4E-73 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 PIRSF PIRSF001338 2 163 5.5E-66 T 14-09-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 SUPERFAMILY SSF52255 6 161 3.53E-66 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 Pfam PF00731 AIR carboxylase 7 153 5.1E-64 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 PANTHER PTHR11609:SF5 3 158 7.1E-82 T 14-09-2016 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 32.389 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 SMART SM01001 5 156 8.6E-102 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 PANTHER PTHR11609 3 158 7.1E-82 T 14-09-2016 AMK01_RS18225 8f82cd5f4460e53c068ad7c56697b5a8 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 158 1.1E-65 T 14-09-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Gene3D G3DSA:1.10.10.10 613 684 2.2E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PANTHER PTHR30603:SF0 28 184 2.6E-224 T 14-09-2016 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Pfam PF03979 Sigma-70 factor, region 1.1 27 102 2.5E-22 T 14-09-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 448 672 2.3E-38 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PANTHER PTHR30603:SF0 402 684 2.6E-224 T 14-09-2016 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 SUPERFAMILY SSF88659 524 597 3.4E-21 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Pfam PF04542 Sigma-70 region 2 451 520 2.0E-21 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Pfam PF00140 Sigma-70 factor, region 1.2 130 162 9.7E-14 T 14-09-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Pfam PF04545 Sigma-70, region 4 619 672 1.5E-18 T 14-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 18 684 47.056 T 14-09-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PRINTS PR00046 Major sigma-70 factor signature 623 635 6.6E-31 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PRINTS PR00046 Major sigma-70 factor signature 644 659 6.6E-31 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PRINTS PR00046 Major sigma-70 factor signature 659 670 6.6E-31 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PRINTS PR00046 Major sigma-70 factor signature 499 507 6.6E-31 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PRINTS PR00046 Major sigma-70 factor signature 475 488 6.6E-31 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Gene3D G3DSA:1.10.601.10 144 520 5.6E-128 T 14-09-2016 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Gene3D G3DSA:1.10.10.10 524 575 2.2E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Pfam PF04546 Sigma-70, non-essential region 172 419 2.6E-42 T 14-09-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 447 683 6.5E-120 T 14-09-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 Pfam PF04539 Sigma-70 region 3 530 605 2.7E-29 T 14-09-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 SUPERFAMILY SSF88659 581 683 3.92E-26 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 475 488 - T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 644 670 - T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PANTHER PTHR30603 402 684 2.6E-224 T 14-09-2016 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 PANTHER PTHR30603 28 184 2.6E-224 T 14-09-2016 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 SUPERFAMILY SSF88946 147 210 1.3E-96 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15090 a2b9c1878278b8709347749917eebcf8 685 SUPERFAMILY SSF88946 240 518 1.3E-96 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 14-09-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 PANTHER PTHR20854 1 236 2.0E-56 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 Pfam PF00459 Inositol monophosphatase family 5 243 6.1E-46 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 33 53 4.3E-13 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 55 71 4.3E-13 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 4.3E-13 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 4.3E-13 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 PANTHER PTHR20854:SF5 1 236 2.0E-56 T 14-09-2016 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 Gene3D G3DSA:3.40.190.80 156 257 6.5E-36 T 14-09-2016 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 254 4.1E-80 T 14-09-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 Gene3D G3DSA:3.30.540.10 2 155 6.2E-37 T 14-09-2016 AMK01_RS17100 ac4b753903584d505d3e3ca366a3748d 265 SUPERFAMILY SSF56655 2 241 8.64E-64 T 14-09-2016 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 366 384 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 225 425 5.36E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 1377 1453 8.89E-12 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 510 603 6.93E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 631 649 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1391 1409 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 PRINTS PR00313 NodO calcium binding signature 626 634 3.9E-10 T 14-09-2016 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 PRINTS PR00313 NodO calcium binding signature 635 643 3.9E-10 T 14-09-2016 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 PRINTS PR00313 NodO calcium binding signature 532 543 3.9E-10 T 14-09-2016 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 PRINTS PR00313 NodO calcium binding signature 644 653 3.9E-10 T 14-09-2016 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 540 558 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 1304 1325 8.6E-5 T 14-09-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 636 654 8.6E-5 T 14-09-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1300 1318 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:3.40.390.10 24 225 7.0E-28 T 14-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 879 897 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1130 1146 0.049 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1037 1054 3.0E-4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 799 814 0.0047 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 433 449 2.4 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 626 642 0.0028 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 608 624 64.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 782 797 3.2 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 965 980 0.071 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1459 1475 21.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1394 1410 0.033 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 947 963 4.1 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1221 1237 0.16 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1286 1302 11.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 369 385 13.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 544 559 0.23 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 643 659 43.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1381 1393 0.73 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1112 1129 0.1 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 717 732 0.074 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 865 881 1.1 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1476 1493 0.0066 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 451 466 0.041 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 334 350 0.36 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1203 1220 0.055 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 882 898 0.15 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 526 542 0.0077 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 699 715 42.0 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1304 1320 0.0054 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 351 368 0.003 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 1458 1568 9.81E-18 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 1167 1279 5.23E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1309 1327 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 376 514 9.42E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 1285 1373 3.53E-14 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF55486 3 223 2.94E-26 T 14-09-2016 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 864 940 1.96E-10 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1043 1061 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 622 640 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 795 813 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 531 549 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 607 697 1.27E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 699 832 1.94E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 947 1029 1.19E-11 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 713 731 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 SUPERFAMILY SSF51120 1026 1185 6.65E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1209 1227 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 447 465 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 1363 1433 1.5E-9 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 855 921 4.3E-9 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 1100 1169 3.1E-9 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 255 411 2.3E-17 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 1458 1568 7.5E-20 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 601 675 3.4E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 1014 1084 5.0E-12 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 1194 1351 3.5E-22 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 433 584 3.1E-19 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 946 1002 3.3E-9 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 696 755 4.9E-8 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Gene3D G3DSA:2.150.10.10 773 837 6.3E-11 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 Pfam PF08548 Peptidase M10 serralysin C terminal 225 394 2.2E-7 T 14-09-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 357 375 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 961 979 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS03825 ce5439ca95007e6bc5e6c859eab94f6e 1569 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1218 1236 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS20610 532544492e1212a5c1ec3583d085d3a2 215 Gene3D G3DSA:3.40.30.10 12 93 5.4E-21 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20610 532544492e1212a5c1ec3583d085d3a2 215 SUPERFAMILY SSF52833 3 88 2.33E-20 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20610 532544492e1212a5c1ec3583d085d3a2 215 SUPERFAMILY SSF47616 86 203 1.6E-14 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS20610 532544492e1212a5c1ec3583d085d3a2 215 Gene3D G3DSA:1.20.1050.10 94 207 1.2E-35 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS20610 532544492e1212a5c1ec3583d085d3a2 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 82 5.0E-14 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS20610 532544492e1212a5c1ec3583d085d3a2 215 Pfam PF13410 Glutathione S-transferase, C-terminal domain 144 199 1.1E-6 T 14-09-2016 AMK01_RS20610 532544492e1212a5c1ec3583d085d3a2 215 PANTHER PTHR11260:SF144 1 198 1.8E-48 T 14-09-2016 AMK01_RS20610 532544492e1212a5c1ec3583d085d3a2 215 PANTHER PTHR11260 1 198 1.8E-48 T 14-09-2016 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 1.7E-144 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 SUPERFAMILY SSF53901 6 269 9.51E-85 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 PANTHER PTHR18919 1 393 3.7E-224 T 14-09-2016 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 Pfam PF00108 Thiolase, N-terminal domain 6 262 1.4E-106 T 14-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 14-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 2.4E-52 T 14-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 PANTHER PTHR18919:SF95 1 393 3.7E-224 T 14-09-2016 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 14-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 PIRSF PIRSF000429 1 393 7.2E-127 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 SUPERFAMILY SSF53901 271 391 1.69E-46 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 Gene3D G3DSA:3.40.47.10 195 276 5.0E-76 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 Gene3D G3DSA:3.40.47.10 5 125 5.0E-76 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 Gene3D G3DSA:3.40.47.10 277 392 8.4E-73 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS20630 19f667d9c35b9e34e029563845b84604 393 Gene3D G3DSA:3.40.47.10 143 194 8.4E-73 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 SMART SM00382 29 212 2.7E-19 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 Gene3D G3DSA:3.40.50.300 2 237 1.3E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 SUPERFAMILY SSF52540 5 242 4.24E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 PANTHER PTHR24220 6 241 1.0E-132 T 14-09-2016 AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 PANTHER PTHR24220:SF150 6 241 1.0E-132 T 14-09-2016 AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 SUPERFAMILY SSF50331 238 326 6.12E-12 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 Pfam PF08402 TOBE domain 257 323 1.3E-11 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS18905 c246f6ee0243b3741ba673b9d7d18391 328 Pfam PF00005 ABC transporter 21 162 9.2E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS11145 c4677b4058d9e30158b4873c2c3dcd8a 270 PANTHER PTHR22854 1 261 9.1E-106 T 14-09-2016 AMK01_RS11145 c4677b4058d9e30158b4873c2c3dcd8a 270 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 14-09-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMK01_RS11145 c4677b4058d9e30158b4873c2c3dcd8a 270 PANTHER PTHR22854:SF2 1 261 9.1E-106 T 14-09-2016 AMK01_RS11145 c4677b4058d9e30158b4873c2c3dcd8a 270 Gene3D G3DSA:3.20.20.70 1 265 7.9E-101 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS11145 c4677b4058d9e30158b4873c2c3dcd8a 270 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.712 T 14-09-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMK01_RS11145 c4677b4058d9e30158b4873c2c3dcd8a 270 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 3.5E-95 T 14-09-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMK01_RS11145 c4677b4058d9e30158b4873c2c3dcd8a 270 SUPERFAMILY SSF51366 12 262 1.41E-87 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Pfam PF16124 RecQ zinc-binding 354 416 5.0E-17 T 14-09-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Gene3D G3DSA:3.40.50.300 25 211 3.1E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Pfam PF00270 DEAD/DEAH box helicase 41 196 2.1E-19 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Gene3D G3DSA:3.40.50.300 217 355 4.9E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 26 475 6.6E-152 T 14-09-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 SMART SM00341 546 621 4.5E-11 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Pfam PF09382 RQC domain 418 529 4.0E-34 T 14-09-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 SMART SM00487 33 229 1.4E-31 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 26 617 2.0E-234 T 14-09-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 SMART SM00490 261 342 1.6E-25 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 SUPERFAMILY SSF52540 219 461 2.66E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 SUPERFAMILY SSF47819 545 618 6.54E-22 T 14-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Pfam PF00570 HRDC domain 552 616 8.0E-23 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 PANTHER PTHR13710:SF81 25 616 2.9E-263 T 14-09-2016 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Pfam PF00271 Helicase conserved C-terminal domain 237 342 5.2E-15 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Gene3D G3DSA:1.10.10.10 356 530 2.8E-55 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 SUPERFAMILY SSF52540 24 209 1.08E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 PANTHER PTHR13710 25 616 2.9E-263 T 14-09-2016 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 Gene3D G3DSA:1.10.150.80 551 618 1.5E-18 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK01_RS15110 9bb96e0e813694c439ac57f1e14bd39d 622 SMART SM00956 423 526 1.1E-42 T 14-09-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 171 4.1E-50 T 14-09-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 SUPERFAMILY SSF48179 178 470 5.83E-112 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 Gene3D G3DSA:1.20.5.320 441 469 3.6E-14 T 14-09-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 180 469 1.6E-111 T 14-09-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 469 1.4E-185 T 14-09-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 Gene3D G3DSA:1.10.1040.10 182 436 1.2E-94 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 SMART SM01350 180 470 1.8E-175 T 14-09-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 121 146 3.4E-79 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 68 97 3.4E-79 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 359 381 3.4E-79 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 169 197 3.4E-79 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 3.4E-79 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 251 278 3.4E-79 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 255 267 - T 14-09-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PANTHER PTHR11811 2 460 3.5E-230 T 14-09-2016 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 Gene3D G3DSA:3.40.50.720 2 181 1.7E-51 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PANTHER PTHR11811:SF25 2 460 3.5E-230 T 14-09-2016 AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 SUPERFAMILY SSF51735 4 178 3.38E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12625 d3486ee633c59b9dfb185c90727874ba 476 PIRSF PIRSF000109 1 475 5.9E-185 T 14-09-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS19060 f9349a283d1b869fcd065133e2c217c5 202 SUPERFAMILY SSF48498 87 201 5.19E-11 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS19060 f9349a283d1b869fcd065133e2c217c5 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 5.8E-15 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS19060 f9349a283d1b869fcd065133e2c217c5 202 PANTHER PTHR30055 3 201 2.9E-49 T 14-09-2016 AMK01_RS19060 f9349a283d1b869fcd065133e2c217c5 202 SUPERFAMILY SSF46689 11 91 1.51E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS19060 f9349a283d1b869fcd065133e2c217c5 202 Gene3D G3DSA:1.10.357.10 13 200 3.8E-31 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS19060 f9349a283d1b869fcd065133e2c217c5 202 PANTHER PTHR30055:SF60 3 201 2.9E-49 T 14-09-2016 AMK01_RS19060 f9349a283d1b869fcd065133e2c217c5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 3.2E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS19060 f9349a283d1b869fcd065133e2c217c5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 3.2E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS01385 85d19dc291d63c323636db4fb8f286d8 97 PANTHER PTHR36417 2 94 7.6E-44 T 14-09-2016 AMK01_RS01385 85d19dc291d63c323636db4fb8f286d8 97 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 7 78 3.5E-24 T 14-09-2016 IPR011893 Selenoprotein, Rdx type AMK01_RS01385 85d19dc291d63c323636db4fb8f286d8 97 SUPERFAMILY SSF52833 5 88 3.35E-30 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01385 85d19dc291d63c323636db4fb8f286d8 97 Pfam PF10262 Rdx family 6 79 3.2E-34 T 14-09-2016 IPR011893 Selenoprotein, Rdx type AMK01_RS01385 85d19dc291d63c323636db4fb8f286d8 97 Gene3D G3DSA:3.40.30.10 2 95 5.5E-45 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01385 85d19dc291d63c323636db4fb8f286d8 97 PANTHER PTHR36417:SF1 2 94 7.6E-44 T 14-09-2016 AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 SMART SM00861 11 176 1.0E-42 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 PANTHER PTHR11624 14 318 3.1E-98 T 14-09-2016 IPR033247 Transketolase family AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 SUPERFAMILY SSF52922 182 315 3.8E-36 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 Gene3D G3DSA:3.40.50.920 188 315 4.8E-39 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 Pfam PF02779 Transketolase, pyrimidine binding domain 12 171 4.3E-30 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 SUPERFAMILY SSF52518 6 176 4.81E-49 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 Pfam PF02780 Transketolase, C-terminal domain 187 307 6.2E-31 T 14-09-2016 IPR033248 Transketolase, C-terminal domain AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 PANTHER PTHR11624:SF2 14 318 3.1E-98 T 14-09-2016 AMK01_RS12245 8b013c96a8ee92a65aa4d59f2474fb6d 318 Gene3D G3DSA:3.40.50.970 9 187 6.4E-52 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS15590 349b75e0c475740258c4db31f6ed1c2a 336 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 268 1.6E-12 T 14-09-2016 AMK01_RS15590 349b75e0c475740258c4db31f6ed1c2a 336 PANTHER PTHR32419 1 323 4.6E-179 T 14-09-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AMK01_RS15590 349b75e0c475740258c4db31f6ed1c2a 336 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 1.2E-23 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS15590 349b75e0c475740258c4db31f6ed1c2a 336 SUPERFAMILY SSF52833 42 161 6.25E-17 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS15590 349b75e0c475740258c4db31f6ed1c2a 336 Gene3D G3DSA:1.20.1050.10 179 288 8.4E-26 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS15590 349b75e0c475740258c4db31f6ed1c2a 336 Gene3D G3DSA:3.40.30.10 38 178 4.4E-21 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS15590 349b75e0c475740258c4db31f6ed1c2a 336 PIRSF PIRSF015753 5 323 2.4E-135 T 14-09-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AMK01_RS15590 349b75e0c475740258c4db31f6ed1c2a 336 SUPERFAMILY SSF47616 170 323 2.51E-36 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS04805 9e8fef0ef2701ce495d56be06abf7463 101 SUPERFAMILY SSF101386 23 98 9.72E-16 T 14-09-2016 AMK01_RS04805 9e8fef0ef2701ce495d56be06abf7463 101 Gene3D G3DSA:1.10.287.1080 9 95 1.6E-11 T 14-09-2016 AMK01_RS04805 9e8fef0ef2701ce495d56be06abf7463 101 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 4 92 5.7E-5 T 14-09-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 PIRSF PIRSF000183 1 370 1.3E-149 T 14-09-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 7.9E-154 T 14-09-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 Gene3D G3DSA:3.40.50.1770 203 358 1.0E-29 T 14-09-2016 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 PANTHER PTHR10160 1 372 1.7E-204 T 14-09-2016 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 14-09-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 Gene3D G3DSA:3.50.50.60 172 202 4.6E-7 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 SMART SM01002 149 297 2.4E-92 T 14-09-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.2E-47 T 14-09-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 351 1.4E-82 T 14-09-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 SMART SM01003 4 137 1.0E-78 T 14-09-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 SUPERFAMILY SSF51735 137 303 3.83E-51 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 Gene3D G3DSA:3.40.50.1770 1 171 8.9E-58 T 14-09-2016 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 SUPERFAMILY SSF52283 305 359 5.36E-64 T 14-09-2016 AMK01_RS08945 04420f4bfabe387ffa2a2a60d9c384ba 372 SUPERFAMILY SSF52283 1 137 5.36E-64 T 14-09-2016 AMK01_RS13490 4c7717e22569dbb72142d0c0c169f73c 274 PANTHER PTHR35010:SF2 7 273 2.2E-104 T 14-09-2016 AMK01_RS13490 4c7717e22569dbb72142d0c0c169f73c 274 Gene3D G3DSA:1.10.260.40 7 81 2.9E-15 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS13490 4c7717e22569dbb72142d0c0c169f73c 274 SUPERFAMILY SSF47413 32 78 7.29E-7 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS13490 4c7717e22569dbb72142d0c0c169f73c 274 Pfam PF13560 Helix-turn-helix domain 10 88 6.2E-16 T 14-09-2016 AMK01_RS13490 4c7717e22569dbb72142d0c0c169f73c 274 PANTHER PTHR35010 7 273 2.2E-104 T 14-09-2016 AMK01_RS13490 4c7717e22569dbb72142d0c0c169f73c 274 SMART SM00530 14 85 3.2E-6 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 95 338 7.6E-20 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 SUPERFAMILY SSF111369 234 336 8.76E-14 T 14-09-2016 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 PANTHER PTHR30386:SF7 50 390 2.8E-106 T 14-09-2016 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 Pfam PF00529 HlyD membrane-fusion protein of T1SS 145 383 9.3E-7 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 Gene3D G3DSA:2.40.50.100 97 129 4.9E-20 T 14-09-2016 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 Gene3D G3DSA:2.40.50.100 260 293 4.9E-20 T 14-09-2016 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 PANTHER PTHR30386 50 390 2.8E-106 T 14-09-2016 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 1.0E-5 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 378 393 1.0E-5 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS06145 74538c61a7ac3c9df096d74fd98cf043 413 SUPERFAMILY SSF111369 95 180 8.63E-12 T 14-09-2016 AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 PANTHER PTHR30267 1 647 1.1E-270 T 14-09-2016 AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 PIRSF PIRSF000549 1 647 2.6E-280 T 14-09-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 Gene3D G3DSA:3.40.50.300 246 332 2.2E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 Gene3D G3DSA:3.40.50.300 78 161 2.2E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 SUPERFAMILY SSF52540 78 370 9.81E-16 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 PANTHER PTHR30267:SF2 1 647 1.1E-270 T 14-09-2016 AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 Pfam PF08298 PrkA AAA domain 22 382 3.0E-176 T 14-09-2016 IPR013153 PrkA AAA domain AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 SMART SM00763 22 383 3.2E-205 T 14-09-2016 IPR013153 PrkA AAA domain AMK01_RS14460 d503f4da922c36113bd12b483c8db1bf 647 Pfam PF06798 PrkA serine protein kinase C-terminal domain 386 639 6.2E-76 T 14-09-2016 IPR010650 PrkA C-terminal domain AMK01_RS04310 ef6390f893ad44f1ea302f67c63d07bf 439 PANTHER PTHR23417 1 117 1.2E-82 T 14-09-2016 AMK01_RS04310 ef6390f893ad44f1ea302f67c63d07bf 439 SUPERFAMILY SSF53756 59 402 4.6E-12 T 14-09-2016 AMK01_RS04310 ef6390f893ad44f1ea302f67c63d07bf 439 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 43 214 1.4E-55 T 14-09-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 AMK01_RS04310 ef6390f893ad44f1ea302f67c63d07bf 439 PANTHER PTHR23417:SF2 1 117 1.2E-82 T 14-09-2016 AMK01_RS04310 ef6390f893ad44f1ea302f67c63d07bf 439 PANTHER PTHR23417:SF2 196 434 1.2E-82 T 14-09-2016 AMK01_RS04310 ef6390f893ad44f1ea302f67c63d07bf 439 PANTHER PTHR23417 136 146 1.2E-82 T 14-09-2016 AMK01_RS04310 ef6390f893ad44f1ea302f67c63d07bf 439 PANTHER PTHR23417:SF2 136 146 1.2E-82 T 14-09-2016 AMK01_RS04310 ef6390f893ad44f1ea302f67c63d07bf 439 PANTHER PTHR23417 196 434 1.2E-82 T 14-09-2016 AMK01_RS04860 c21fa78bf99b1f658e2062210a6af32e 202 Gene3D G3DSA:2.60.370.10 58 191 9.0E-53 T 14-09-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AMK01_RS04860 c21fa78bf99b1f658e2062210a6af32e 202 PIRSF PIRSF005413 2 197 1.4E-73 T 14-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMK01_RS04860 c21fa78bf99b1f658e2062210a6af32e 202 PANTHER PTHR21320 13 180 2.1E-58 T 14-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMK01_RS04860 c21fa78bf99b1f658e2062210a6af32e 202 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 187 43.683 T 14-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMK01_RS04860 c21fa78bf99b1f658e2062210a6af32e 202 PANTHER PTHR21320:SF3 13 180 2.1E-58 T 14-09-2016 AMK01_RS04860 c21fa78bf99b1f658e2062210a6af32e 202 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 36 180 6.7E-56 T 14-09-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AMK01_RS04860 c21fa78bf99b1f658e2062210a6af32e 202 SUPERFAMILY SSF110111 58 184 9.02E-49 T 14-09-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AMK01_RS11870 0df41ebda10c9017fa81102f888b7cad 403 Gene3D G3DSA:3.40.718.10 3 402 5.9E-178 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK01_RS11870 0df41ebda10c9017fa81102f888b7cad 403 SUPERFAMILY SSF53659 1 402 2.69E-153 T 14-09-2016 AMK01_RS11870 0df41ebda10c9017fa81102f888b7cad 403 PIRSF PIRSF000108 1 403 9.6E-227 T 14-09-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMK01_RS11870 0df41ebda10c9017fa81102f888b7cad 403 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 269 288 - T 14-09-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK01_RS11870 0df41ebda10c9017fa81102f888b7cad 403 SMART SM01329 9 394 6.6E-135 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK01_RS11870 0df41ebda10c9017fa81102f888b7cad 403 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 2 402 4.0E-215 T 14-09-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMK01_RS11870 0df41ebda10c9017fa81102f888b7cad 403 PANTHER PTHR11822 1 403 0.0 T 14-09-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMK01_RS11870 0df41ebda10c9017fa81102f888b7cad 403 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 394 5.8E-76 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 283 4.2E-29 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 SUPERFAMILY SSF88946 13 121 7.85E-39 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 PRINTS PR00046 Major sigma-70 factor signature 101 109 2.7E-20 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 PRINTS PR00046 Major sigma-70 factor signature 254 269 2.7E-20 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 PRINTS PR00046 Major sigma-70 factor signature 77 90 2.7E-20 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 PRINTS PR00046 Major sigma-70 factor signature 269 280 2.7E-20 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 PRINTS PR00046 Major sigma-70 factor signature 235 247 2.7E-20 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 285 4.4E-113 T 14-09-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 286 52.654 T 14-09-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 PANTHER PTHR30376 2 299 2.2E-98 T 14-09-2016 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 Gene3D G3DSA:1.10.10.10 226 290 3.9E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 Pfam PF04542 Sigma-70 region 2 53 121 1.3E-16 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 SUPERFAMILY SSF88659 193 289 5.79E-19 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 PIRSF PIRSF000770 10 300 2.0E-38 T 14-09-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 Pfam PF00140 Sigma-70 factor, region 1.2 18 44 1.7E-6 T 14-09-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 Gene3D G3DSA:1.10.601.10 15 119 3.7E-37 T 14-09-2016 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 Pfam PF04545 Sigma-70, region 4 231 281 1.3E-15 T 14-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS17185 6151099ec7b34032b59798fba7cd3149 302 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 254 280 - T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 12 529 1.5E-204 T 14-09-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 PANTHER PTHR30031 24 532 4.5E-285 T 14-09-2016 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 Gene3D G3DSA:3.90.228.20 339 529 1.1E-120 T 14-09-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 Gene3D G3DSA:3.90.228.20 216 278 1.1E-120 T 14-09-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 Pfam PF01293 Phosphoenolpyruvate carboxykinase 23 482 3.6E-212 T 14-09-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 17 531 55.108 T 14-09-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 PANTHER PTHR30031:SF0 24 532 4.5E-285 T 14-09-2016 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 SUPERFAMILY SSF68923 9 215 2.27E-78 T 14-09-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 Gene3D G3DSA:3.40.449.10 23 215 1.3E-73 T 14-09-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 SUPERFAMILY SSF53795 216 529 2.38E-135 T 14-09-2016 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 PIRSF PIRSF006294 6 531 6.0E-225 T 14-09-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK01_RS00190 5d75b51a1bff95256db5f79385eec6ba 536 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 253 268 - T 14-09-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK01_RS04735 83e494151b3d49205317a6a1d3fee296 224 SMART SM00382 26 205 2.6E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS04735 83e494151b3d49205317a6a1d3fee296 224 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS04735 83e494151b3d49205317a6a1d3fee296 224 Pfam PF00005 ABC transporter 26 161 3.4E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS04735 83e494151b3d49205317a6a1d3fee296 224 PANTHER PTHR24220 4 224 2.2E-57 T 14-09-2016 AMK01_RS04735 83e494151b3d49205317a6a1d3fee296 224 SUPERFAMILY SSF52540 10 207 2.73E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04735 83e494151b3d49205317a6a1d3fee296 224 Gene3D G3DSA:3.40.50.300 3 220 1.3E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 PANTHER PTHR11757 8 700 2.9E-273 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 PANTHER PTHR11757:SF3 8 700 2.9E-273 T 14-09-2016 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 11 424 2.1E-81 T 14-09-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 629 651 5.4E-44 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 611 626 5.4E-44 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 522 541 5.4E-44 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 494 518 5.4E-44 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 468 486 5.4E-44 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 552 572 5.4E-44 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 SUPERFAMILY SSF53474 436 678 6.73E-44 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 SUPERFAMILY SSF50993 6 432 9.94E-91 T 14-09-2016 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 Gene3D G3DSA:3.40.50.1820 435 678 3.0E-34 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 Pfam PF00326 Prolyl oligopeptidase family 485 700 5.9E-67 T 14-09-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 Gene3D G3DSA:2.130.10.120 89 428 1.6E-101 T 14-09-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMK01_RS06305 d4c0ff084386fb34c2d7196351046dc0 702 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 529 559 - T 14-09-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AMK01_RS14860 8efac6fadbd02de73507b192b59082c9 353 SUPERFAMILY SSF55347 127 279 1.18E-13 T 14-09-2016 AMK01_RS14860 8efac6fadbd02de73507b192b59082c9 353 SUPERFAMILY SSF51735 4 152 1.93E-40 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14860 8efac6fadbd02de73507b192b59082c9 353 PANTHER PTHR22604 1 353 3.0E-49 T 14-09-2016 AMK01_RS14860 8efac6fadbd02de73507b192b59082c9 353 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 123 3.2E-25 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS14860 8efac6fadbd02de73507b192b59082c9 353 Gene3D G3DSA:3.30.360.10 141 353 2.1E-22 T 14-09-2016 AMK01_RS14860 8efac6fadbd02de73507b192b59082c9 353 Gene3D G3DSA:3.40.50.720 2 140 9.5E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 SUPERFAMILY SSF52540 206 504 2.22E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 PANTHER PTHR11070 181 398 1.1E-29 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 PANTHER PTHR11070 418 507 1.1E-29 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 PANTHER PTHR11070:SF23 181 398 1.1E-29 T 14-09-2016 AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 Pfam PF00580 UvrD/REP helicase N-terminal domain 207 326 2.4E-25 T 14-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 Gene3D G3DSA:3.40.50.300 216 325 1.9E-30 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 Gene3D G3DSA:3.40.50.300 4 42 1.9E-30 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 PANTHER PTHR11070 12 33 1.1E-29 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 Gene3D G3DSA:3.40.50.300 346 480 3.3E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 PANTHER PTHR11070:SF23 418 507 1.1E-29 T 14-09-2016 AMK01_RS22795 eed3b6432aa7e159194b4a571c9edaa2 507 PANTHER PTHR11070:SF23 12 33 1.1E-29 T 14-09-2016 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 SUPERFAMILY SSF111369 100 162 4.18E-5 T 14-09-2016 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 Pfam PF13437 HlyD family secretion protein 322 413 3.2E-12 T 14-09-2016 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PANTHER PTHR30386 58 154 2.1E-53 T 14-09-2016 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PANTHER PTHR30386:SF4 181 482 2.1E-53 T 14-09-2016 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 Gene3D G3DSA:2.40.50.100 319 353 2.0E-8 T 14-09-2016 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 Gene3D G3DSA:2.40.50.100 102 133 2.0E-8 T 14-09-2016 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 445 460 1.8E-34 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 460 480 1.8E-34 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 111 131 1.8E-34 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 92 1.8E-34 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 334 355 1.8E-34 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 367 391 1.8E-34 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 59 480 3.8E-93 T 14-09-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PANTHER PTHR30386 181 482 2.1E-53 T 14-09-2016 AMK01_RS07035 56291dbaa7ef2a4a6352be19defb5375 482 PANTHER PTHR30386:SF4 58 154 2.1E-53 T 14-09-2016 AMK01_RS00675 298ac4f990ed8434fa548d0c4f7706cc 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 171 47.377 T 14-09-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS00675 298ac4f990ed8434fa548d0c4f7706cc 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 169 1.5E-91 T 14-09-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS00675 298ac4f990ed8434fa548d0c4f7706cc 171 Gene3D G3DSA:3.10.129.10 2 169 1.7E-56 T 14-09-2016 IPR029069 HotDog domain AMK01_RS00675 298ac4f990ed8434fa548d0c4f7706cc 171 Pfam PF07977 FabA-like domain 29 158 3.2E-48 T 14-09-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK01_RS00675 298ac4f990ed8434fa548d0c4f7706cc 171 SUPERFAMILY SSF54637 3 168 6.46E-54 T 14-09-2016 IPR029069 HotDog domain AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 PANTHER PTHR10357 414 426 2.7E-225 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 PANTHER PTHR10357 458 556 2.7E-225 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 Pfam PF00128 Alpha amylase, catalytic domain 43 378 1.6E-116 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 Gene3D G3DSA:3.90.400.10 120 190 3.7E-30 T 14-09-2016 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 PANTHER PTHR10357:SF142 17 396 2.7E-225 T 14-09-2016 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 Gene3D G3DSA:2.60.40.1180 483 558 2.8E-17 T 14-09-2016 IPR013780 Glycosyl hydrolase, all-beta AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 PANTHER PTHR10357 17 396 2.7E-225 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 SMART SM00642 28 421 1.4E-152 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 SUPERFAMILY SSF51445 18 479 6.28E-152 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 SUPERFAMILY SSF51011 482 556 3.36E-14 T 14-09-2016 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 Gene3D G3DSA:3.20.20.80 17 119 5.8E-125 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 Gene3D G3DSA:3.20.20.80 191 481 5.8E-125 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 Pfam PF16657 Maltogenic Amylase, C-terminal domain 482 553 6.2E-8 T 14-09-2016 IPR032091 Maltogenic Amylase, C-terminal AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 PANTHER PTHR10357:SF142 414 426 2.7E-225 T 14-09-2016 AMK01_RS16895 0ece6d2bf7b37d282209bf4b038c78b9 559 PANTHER PTHR10357:SF142 458 556 2.7E-225 T 14-09-2016 AMK01_RS06205 daf00c953a3ee0b8ec085f8ae3cebe60 281 PANTHER PTHR16509 2 281 9.0E-46 T 14-09-2016 AMK01_RS06205 daf00c953a3ee0b8ec085f8ae3cebe60 281 Pfam PF00149 Calcineurin-like phosphoesterase 9 230 1.2E-14 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS06205 daf00c953a3ee0b8ec085f8ae3cebe60 281 PANTHER PTHR16509:SF1 2 281 9.0E-46 T 14-09-2016 AMK01_RS06205 daf00c953a3ee0b8ec085f8ae3cebe60 281 Gene3D G3DSA:3.60.21.10 7 273 1.0E-64 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS06205 daf00c953a3ee0b8ec085f8ae3cebe60 281 SUPERFAMILY SSF56300 8 276 1.9E-58 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS14990 eab0b815e8e372eefa8993fc2f0b0ef7 122 Pfam PF00072 Response regulator receiver domain 9 117 1.4E-16 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS14990 eab0b815e8e372eefa8993fc2f0b0ef7 122 SMART SM00448 7 117 5.8E-15 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS14990 eab0b815e8e372eefa8993fc2f0b0ef7 122 Gene3D G3DSA:3.40.50.2300 5 121 3.9E-28 T 14-09-2016 AMK01_RS14990 eab0b815e8e372eefa8993fc2f0b0ef7 122 SUPERFAMILY SSF52172 7 121 8.54E-25 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS14990 eab0b815e8e372eefa8993fc2f0b0ef7 122 PANTHER PTHR24423 1 122 5.2E-19 T 14-09-2016 AMK01_RS14990 eab0b815e8e372eefa8993fc2f0b0ef7 122 PANTHER PTHR24423:SF438 1 122 5.2E-19 T 14-09-2016 AMK01_RS09560 4103de9ad83826f84b2e06cc92a90d69 101 PANTHER PTHR12219 1 95 5.5E-31 T 14-09-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AMK01_RS09560 4103de9ad83826f84b2e06cc92a90d69 101 Pfam PF04800 ETC complex I subunit conserved region 3 96 5.4E-32 T 14-09-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AMK01_RS09560 4103de9ad83826f84b2e06cc92a90d69 101 Gene3D G3DSA:3.30.160.190 1 78 7.9E-33 T 14-09-2016 AMK01_RS09560 4103de9ad83826f84b2e06cc92a90d69 101 PANTHER PTHR12219:SF18 1 95 5.5E-31 T 14-09-2016 AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 PANTHER PTHR10210:SF41 1 310 3.5E-177 T 14-09-2016 AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 SMART SM01400 1 117 8.9E-81 T 14-09-2016 AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 Gene3D G3DSA:3.40.50.2020 157 282 1.1E-47 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 Pfam PF14572 Phosphoribosyl synthetase-associated domain 199 309 2.7E-22 T 14-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 5.5E-51 T 14-09-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 SUPERFAMILY SSF53271 66 300 3.02E-62 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 PANTHER PTHR10210 1 310 3.5E-177 T 14-09-2016 AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 Gene3D G3DSA:3.40.50.2020 1 156 3.4E-76 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 310 48.779 T 14-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 14-09-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 AMK01_RS15415 80336fa8d1a90a3cc3152d076f47b52c 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 310 1.3E-115 T 14-09-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK01_RS09435 fb0e4c493ced0c7b0eb23a750a1b550f 157 SUPERFAMILY SSF55729 6 150 5.32E-26 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09435 fb0e4c493ced0c7b0eb23a750a1b550f 157 PANTHER PTHR23091 4 147 1.3E-18 T 14-09-2016 AMK01_RS09435 fb0e4c493ced0c7b0eb23a750a1b550f 157 Pfam PF13508 Acetyltransferase (GNAT) domain 58 147 2.2E-11 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS09435 fb0e4c493ced0c7b0eb23a750a1b550f 157 Gene3D G3DSA:3.40.630.30 7 156 1.5E-38 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19535 a59c62ef16b785ff8e6e269e563d1485 119 SMART SM00448 2 113 4.2E-23 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS19535 a59c62ef16b785ff8e6e269e563d1485 119 PANTHER PTHR26402 2 117 3.6E-27 T 14-09-2016 AMK01_RS19535 a59c62ef16b785ff8e6e269e563d1485 119 SUPERFAMILY SSF52172 1 117 1.29E-31 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS19535 a59c62ef16b785ff8e6e269e563d1485 119 Pfam PF00072 Response regulator receiver domain 4 113 9.0E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS19535 a59c62ef16b785ff8e6e269e563d1485 119 Gene3D G3DSA:3.40.50.2300 1 117 2.9E-33 T 14-09-2016 AMK01_RS03595 eb71b2fba89d5951ac0efcacec34e988 223 PANTHER PTHR26402:SF578 62 204 2.5E-23 T 14-09-2016 AMK01_RS03595 eb71b2fba89d5951ac0efcacec34e988 223 Gene3D G3DSA:3.40.50.2300 2 118 1.7E-9 T 14-09-2016 AMK01_RS03595 eb71b2fba89d5951ac0efcacec34e988 223 PANTHER PTHR26402 62 204 2.5E-23 T 14-09-2016 AMK01_RS03595 eb71b2fba89d5951ac0efcacec34e988 223 SMART SM00862 144 220 2.1E-15 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS03595 eb71b2fba89d5951ac0efcacec34e988 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 1.0E-14 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS03595 eb71b2fba89d5951ac0efcacec34e988 223 SUPERFAMILY SSF46894 124 220 1.36E-16 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS03595 eb71b2fba89d5951ac0efcacec34e988 223 SUPERFAMILY SSF52172 2 124 4.98E-11 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS03595 eb71b2fba89d5951ac0efcacec34e988 223 Gene3D G3DSA:1.10.10.10 127 220 4.5E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 Pfam PF01018 GTP1/OBG 3 158 1.1E-58 T 14-09-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 325 8.3E-135 T 14-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-09-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 PANTHER PTHR11702:SF3 1 334 1.4E-147 T 14-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 Hamap MF_01454 GTPase Obg [obg]. 2 327 44.936 T 14-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 PIRSF PIRSF002401 1 360 2.0E-129 T 14-09-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 4.5E-33 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 4.5E-33 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.5E-33 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.5E-33 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 SUPERFAMILY SSF52540 152 334 2.39E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 Pfam PF01926 50S ribosome-binding GTPase 162 276 2.2E-24 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 PANTHER PTHR11702 1 334 1.4E-147 T 14-09-2016 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 SUPERFAMILY SSF82051 2 158 1.23E-54 T 14-09-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 Gene3D G3DSA:2.70.210.12 2 155 4.9E-57 T 14-09-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK01_RS20895 e0736c3d1d17eb71f06a9ed6b7583a84 362 Gene3D G3DSA:3.40.50.300 160 337 9.7E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 PANTHER PTHR11014 190 325 4.6E-98 T 14-09-2016 AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 PANTHER PTHR11014 1 172 4.6E-98 T 14-09-2016 AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 Gene3D G3DSA:3.40.630.10 273 318 5.0E-28 T 14-09-2016 AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 Gene3D G3DSA:3.40.630.10 2 97 5.0E-28 T 14-09-2016 AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 Gene3D G3DSA:3.30.70.360 103 269 5.4E-58 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 Pfam PF07687 Peptidase dimerisation domain 101 260 5.1E-25 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 Pfam PF01546 Peptidase family M20/M25/M40 4 327 4.3E-21 T 14-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 PANTHER PTHR11014:SF72 190 325 4.6E-98 T 14-09-2016 AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 PANTHER PTHR11014:SF72 1 172 4.6E-98 T 14-09-2016 AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 SUPERFAMILY SSF53187 274 327 7.14E-28 T 14-09-2016 AMK01_RS22080 8d7eb9c3d4a91f3dd084d02985aa7b58 329 SUPERFAMILY SSF53187 2 103 7.14E-28 T 14-09-2016 AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 Pfam PF08241 Methyltransferase domain 161 257 1.7E-23 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 PANTHER PTHR10108 117 303 3.6E-32 T 14-09-2016 AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 Gene3D G3DSA:3.40.50.150 115 301 2.0E-40 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 SUPERFAMILY SSF53335 121 308 1.24E-42 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 Gene3D G3DSA:1.10.10.10 9 98 1.5E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 SUPERFAMILY SSF46785 11 108 9.85E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 SMART SM00418 14 93 9.4E-19 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 6.3E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 6.3E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 46 6.3E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 6.3E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS14745 2e5c4dbe6074393e061250e65610124a 341 Pfam PF01022 Bacterial regulatory protein, arsR family 22 66 3.3E-13 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS07180 fdbadc357c21a43d817a76324a5ee73c 138 TIGRFAM TIGR02301 TIGR02301: TIGR02301 family protein 33 136 2.5E-44 T 14-09-2016 IPR012645 Conserved hypothetical protein CHP02301 AMK01_RS07180 fdbadc357c21a43d817a76324a5ee73c 138 Pfam PF09539 Protein of unknown function (DUF2385) 40 136 3.0E-37 T 14-09-2016 IPR012645 Conserved hypothetical protein CHP02301 AMK01_RS17395 f8c9ffc255013bfb5c9a41530b017b6f 244 Gene3D G3DSA:2.60.120.10 36 153 3.7E-13 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS17395 f8c9ffc255013bfb5c9a41530b017b6f 244 Pfam PF13545 Crp-like helix-turn-helix domain 163 235 4.1E-15 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK01_RS17395 f8c9ffc255013bfb5c9a41530b017b6f 244 SUPERFAMILY SSF51206 39 154 6.94E-17 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AMK01_RS17395 f8c9ffc255013bfb5c9a41530b017b6f 244 SUPERFAMILY SSF46785 162 238 9.33E-14 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17395 f8c9ffc255013bfb5c9a41530b017b6f 244 Pfam PF00027 Cyclic nucleotide-binding domain 44 130 1.9E-8 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS17395 f8c9ffc255013bfb5c9a41530b017b6f 244 Gene3D G3DSA:1.10.10.10 162 238 4.6E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17395 f8c9ffc255013bfb5c9a41530b017b6f 244 PANTHER PTHR24567 42 238 4.1E-29 T 14-09-2016 AMK01_RS03105 b962672fd23df653f875bee012d53037 206 Hamap MF_00528 Septum formation protein Maf [maf]. 6 199 31.886 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AMK01_RS03105 b962672fd23df653f875bee012d53037 206 Pfam PF02545 Maf-like protein 6 192 5.3E-49 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AMK01_RS03105 b962672fd23df653f875bee012d53037 206 SUPERFAMILY SSF52972 4 193 3.6E-56 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK01_RS03105 b962672fd23df653f875bee012d53037 206 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 192 2.1E-46 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AMK01_RS03105 b962672fd23df653f875bee012d53037 206 PIRSF PIRSF006305 1 200 7.5E-50 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AMK01_RS03105 b962672fd23df653f875bee012d53037 206 Gene3D G3DSA:3.90.950.10 5 196 9.8E-60 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK01_RS26060 4f124bd93560a2bdd7f5ef3c7b26680f 29 Gene3D G3DSA:3.20.20.100 1 29 3.3E-8 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS26060 4f124bd93560a2bdd7f5ef3c7b26680f 29 Pfam PF00248 Aldo/keto reductase family 1 29 1.3E-4 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS26060 4f124bd93560a2bdd7f5ef3c7b26680f 29 SUPERFAMILY SSF51430 1 29 3.54E-7 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 PANTHER PTHR32303 127 502 2.0E-209 T 14-09-2016 AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 5 779 0.0 T 14-09-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 PANTHER PTHR32303:SF4 127 502 2.0E-209 T 14-09-2016 AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 PANTHER PTHR32303 570 779 2.0E-209 T 14-09-2016 AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 SMART SM00564 218 249 0.13 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 SMART SM00564 278 308 640.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 SMART SM00564 333 374 1.3 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 SMART SM00564 402 452 310.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 SMART SM00564 701 734 1.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 SUPERFAMILY SSF50998 551 779 1.57E-149 T 14-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 SUPERFAMILY SSF50998 160 516 1.57E-149 T 14-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 165 193 - T 14-09-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 PANTHER PTHR32303:SF4 570 779 2.0E-209 T 14-09-2016 AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 Gene3D G3DSA:2.140.10.10 562 779 4.7E-152 T 14-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 Gene3D G3DSA:2.140.10.10 160 528 4.7E-152 T 14-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 Pfam PF01011 PQQ enzyme repeat 707 744 3.7E-6 T 14-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK01_RS06285 cc10a992b9b73ce64c2e142db8f1c570 779 Pfam PF13360 PQQ-like domain 215 469 2.6E-11 T 14-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK01_RS07165 573a8f110953303182802af3d5f2eab1 281 PANTHER PTHR22602 3 243 2.5E-44 T 14-09-2016 AMK01_RS07165 573a8f110953303182802af3d5f2eab1 281 SUPERFAMILY SSF103025 4 195 3.45E-47 T 14-09-2016 AMK01_RS07165 573a8f110953303182802af3d5f2eab1 281 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 179 247 5.7E-10 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS07165 573a8f110953303182802af3d5f2eab1 281 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 139 204 3.6E-22 T 14-09-2016 IPR017703 YgfZ/GcvT conserved site AMK01_RS07165 573a8f110953303182802af3d5f2eab1 281 Gene3D G3DSA:3.30.70.1400 9 93 1.1E-25 T 14-09-2016 AMK01_RS07165 573a8f110953303182802af3d5f2eab1 281 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 90 5.1E-8 T 14-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMK01_RS07165 573a8f110953303182802af3d5f2eab1 281 PANTHER PTHR22602:SF0 3 243 2.5E-44 T 14-09-2016 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 Gene3D G3DSA:3.40.30.10 9 83 4.8E-5 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 439 450 - T 14-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 145 316 1.6E-45 T 14-09-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 PANTHER PTHR11780:SF0 2 508 4.4E-231 T 14-09-2016 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 SUPERFAMILY SSF52833 3 84 1.43E-6 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 264 279 - T 14-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 SUPERFAMILY SSF142019 97 337 1.96E-86 T 14-09-2016 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 SUPERFAMILY SSF140490 423 509 3.66E-27 T 14-09-2016 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 PANTHER PTHR11780 2 508 4.4E-231 T 14-09-2016 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 508 2.7E-29 T 14-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 SUPERFAMILY SSF142984 341 421 6.8E-19 T 14-09-2016 AMK01_RS19835 33f504d5f372029df2568b97ca7ce9f9 518 SMART SM00928 426 471 2.0E-17 T 14-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 5.0E-14 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 7.6E-10 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 761 1.1E-57 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Gene3D G3DSA:3.40.50.300 551 775 2.1E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 SUPERFAMILY SSF52540 160 546 3.56E-99 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 632 650 - T 14-09-2016 IPR028299 ClpA/B, conserved site 2 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 SMART SM00382 199 345 4.6E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 SMART SM00382 598 749 6.1E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 14-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 PANTHER PTHR11638:SF18 1 860 0.0 T 14-09-2016 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Gene3D G3DSA:3.40.50.300 161 343 1.1E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 SUPERFAMILY SSF81923 4 156 5.79E-38 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 7 856 0.0 T 14-09-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Gene3D G3DSA:1.10.8.60 776 860 8.3E-33 T 14-09-2016 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 1.4E-42 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 1.4E-42 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 1.4E-42 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 1.4E-42 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 PANTHER PTHR11638 1 860 0.0 T 14-09-2016 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Gene3D G3DSA:1.10.1780.10 1 148 7.7E-40 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 SUPERFAMILY SSF52540 547 848 1.3E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 SMART SM01086 767 856 3.9E-39 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Gene3D G3DSA:1.10.8.60 344 429 1.4E-38 T 14-09-2016 AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 847 6.7E-27 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AMK01_RS19295 db57b5617fa81e66ec8c5754804e93dd 866 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 334 4.7E-12 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS11205 7d118b9a837de01203a0be586542891d 256 Gene3D G3DSA:3.20.20.70 6 253 3.0E-89 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS11205 7d118b9a837de01203a0be586542891d 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 251 36.682 T 14-09-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK01_RS11205 7d118b9a837de01203a0be586542891d 256 PANTHER PTHR21139 1 253 3.2E-94 T 14-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK01_RS11205 7d118b9a837de01203a0be586542891d 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-09-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK01_RS11205 7d118b9a837de01203a0be586542891d 256 SUPERFAMILY SSF51351 5 250 1.7E-82 T 14-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK01_RS11205 7d118b9a837de01203a0be586542891d 256 Pfam PF00121 Triosephosphate isomerase 8 247 5.4E-77 T 14-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK01_RS11205 7d118b9a837de01203a0be586542891d 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 241 5.4E-49 T 14-09-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK01_RS09185 dd43cf00217756a181fbd0e326d7f548 337 SUPERFAMILY SSF51445 6 291 5.37E-65 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS09185 dd43cf00217756a181fbd0e326d7f548 337 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 31 296 1.7E-44 T 14-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMK01_RS09185 dd43cf00217756a181fbd0e326d7f548 337 PANTHER PTHR30480:SF7 4 284 3.9E-89 T 14-09-2016 AMK01_RS09185 dd43cf00217756a181fbd0e326d7f548 337 Gene3D G3DSA:3.20.20.300 7 293 6.8E-64 T 14-09-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMK01_RS09185 dd43cf00217756a181fbd0e326d7f548 337 PANTHER PTHR30480 4 284 3.9E-89 T 14-09-2016 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 SUPERFAMILY SSF141072 743 860 4.05E-24 T 14-09-2016 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 Pfam PF07995 Glucose / Sorbosone dehydrogenase 1167 1402 5.2E-21 T 14-09-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 Pfam PF07995 Glucose / Sorbosone dehydrogenase 985 1070 1.6E-10 T 14-09-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 Gene3D G3DSA:2.120.10.30 1165 1415 4.3E-84 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 Gene3D G3DSA:2.120.10.30 975 1104 4.3E-84 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 SUPERFAMILY SSF50952 976 1058 1.2E-26 T 14-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 SUPERFAMILY SSF50952 1147 1291 1.2E-26 T 14-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 SUPERFAMILY SSF50952 1326 1415 1.2E-26 T 14-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 PANTHER PTHR19328 1317 1414 3.2E-64 T 14-09-2016 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 PANTHER PTHR19328 1174 1301 3.2E-64 T 14-09-2016 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 PANTHER PTHR19328 943 1112 3.2E-64 T 14-09-2016 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 SUPERFAMILY SSF141072 861 981 1.96E-33 T 14-09-2016 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 SMART SM00237 727 836 1.0E-6 T 14-09-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 SMART SM00237 850 949 2.3E-25 T 14-09-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 PANTHER PTHR19328:SF29 1317 1414 3.2E-64 T 14-09-2016 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 PANTHER PTHR19328:SF29 943 1112 3.2E-64 T 14-09-2016 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 Pfam PF13313 Domain of unknown function (DUF4082) 586 727 1.1E-45 T 14-09-2016 IPR025141 Domain of unknown function DUF4082 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 Pfam PF03160 Calx-beta domain 743 834 3.2E-11 T 14-09-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 Pfam PF03160 Calx-beta domain 852 949 4.2E-20 T 14-09-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AMK01_RS05445 ee07fb9faa09f2dc0aff9cb1f48ab10e 1427 PANTHER PTHR19328:SF29 1174 1301 3.2E-64 T 14-09-2016 AMK01_RS07450 383b25ce6232f1676502a73d3681cd0c 257 Gene3D G3DSA:1.20.144.10 90 250 6.1E-16 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS07450 383b25ce6232f1676502a73d3681cd0c 257 Pfam PF01569 PAP2 superfamily 122 245 5.8E-16 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS07450 383b25ce6232f1676502a73d3681cd0c 257 SMART SM00014 122 243 0.0076 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS07450 383b25ce6232f1676502a73d3681cd0c 257 SUPERFAMILY SSF48317 28 247 9.97E-13 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 PANTHER PTHR24220:SF333 6 14 2.3E-92 T 14-09-2016 AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 PANTHER PTHR24220:SF333 38 250 2.3E-92 T 14-09-2016 AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 PANTHER PTHR24220 273 319 2.3E-92 T 14-09-2016 AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 PANTHER PTHR24220 6 14 2.3E-92 T 14-09-2016 AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 Pfam PF00005 ABC transporter 42 185 1.6E-22 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 PANTHER PTHR24220 38 250 2.3E-92 T 14-09-2016 AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 PANTHER PTHR24220:SF333 273 319 2.3E-92 T 14-09-2016 AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 Gene3D G3DSA:3.40.50.300 3 253 4.9E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 SUPERFAMILY SSF52540 32 254 7.48E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05910 cd7c1da4a36af915fcf01f2045875f0c 333 SMART SM00382 50 234 1.1E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 Gene3D G3DSA:2.40.50.140 283 341 6.5E-7 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 Gene3D G3DSA:3.40.50.300 4 233 1.9E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 SMART SM00382 28 219 3.6E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 PANTHER PTHR24220 5 286 3.6E-156 T 14-09-2016 AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 Gene3D G3DSA:2.40.50.100 342 356 1.4E-7 T 14-09-2016 AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 Gene3D G3DSA:2.40.50.100 239 282 1.4E-7 T 14-09-2016 AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 Pfam PF00005 ABC transporter 20 161 1.3E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 SUPERFAMILY SSF52540 4 242 7.32E-88 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 SUPERFAMILY SSF50331 236 356 3.4E-22 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS17320 0a66496ceb631878bd6379f2d313b4b0 369 PANTHER PTHR24220:SF151 5 286 3.6E-156 T 14-09-2016 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 Pfam PF08245 Mur ligase middle domain 112 298 4.8E-29 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 PANTHER PTHR23135 2 453 2.4E-203 T 14-09-2016 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 PANTHER PTHR23135:SF5 2 453 2.4E-203 T 14-09-2016 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 Pfam PF01225 Mur ligase family, catalytic domain 10 106 2.2E-28 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 SUPERFAMILY SSF53623 93 316 4.97E-70 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 Gene3D G3DSA:3.40.50.720 10 95 1.2E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 Gene3D G3DSA:3.40.1190.10 96 319 1.5E-85 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 SUPERFAMILY SSF51984 10 94 1.01E-27 T 14-09-2016 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 10 458 3.2E-160 T 14-09-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 403 1.5E-19 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 7 465 42.498 T 14-09-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 SUPERFAMILY SSF53244 317 462 1.14E-46 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14610 4b7417ca9753c222886532b2c960f7ea 471 Gene3D G3DSA:3.90.190.20 320 464 4.4E-51 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 SMART SM00534 352 466 2.0E-41 T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 SUPERFAMILY SSF52540 303 463 8.4E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 Gene3D G3DSA:1.10.1420.10 1 198 1.3E-41 T 14-09-2016 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 Pfam PF05190 MutS family domain IV 160 254 1.8E-20 T 14-09-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 433 449 - T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 SMART SM00533 11 327 2.2E-79 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 PANTHER PTHR11361:SF86 1 466 1.5E-190 T 14-09-2016 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 Pfam PF00488 MutS domain V 355 466 9.7E-57 T 14-09-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 SUPERFAMILY SSF48334 1 300 5.89E-71 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 PANTHER PTHR11361 1 466 1.5E-190 T 14-09-2016 AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 Gene3D G3DSA:3.40.50.300 303 463 1.6E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS29060 6c0abde1c1835239dd3b65b16ea18834 466 Pfam PF05192 MutS domain III 1 295 1.3E-33 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 Pfam PF13932 GidA associated domain 400 610 2.2E-58 T 14-09-2016 IPR026904 GidA associated domain 3 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 SUPERFAMILY SSF51905 96 259 4.99E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 SUPERFAMILY SSF51905 6 65 4.99E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 Gene3D G3DSA:3.50.50.60 332 346 8.4E-37 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 Gene3D G3DSA:3.50.50.60 6 172 8.4E-37 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 PANTHER PTHR11806:SF0 6 618 0.0 T 14-09-2016 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 SMART SM01228 541 612 4.6E-32 T 14-09-2016 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 4 619 39.998 T 14-09-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 6 617 2.1E-234 T 14-09-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 Pfam PF01134 Glucose inhibited division protein A 7 395 5.1E-159 T 14-09-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 366 389 - T 14-09-2016 IPR020595 MnmG-related, conserved site AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 PANTHER PTHR11806 6 618 0.0 T 14-09-2016 AMK01_RS21180 211212544b3fbb1516c48ccf9c24aacc 625 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 14-09-2016 IPR020595 MnmG-related, conserved site AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 SUPERFAMILY SSF53223 2 40 2.09E-10 T 14-09-2016 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 PRINTS PR00072 Malic enzyme signature 38 54 1.0E-5 T 14-09-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 PRINTS PR00072 Malic enzyme signature 69 85 1.0E-5 T 14-09-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 Pfam PF03949 Malic enzyme, NAD binding domain 44 238 1.7E-24 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 PANTHER PTHR23406:SF28 2 330 5.9E-110 T 14-09-2016 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 SUPERFAMILY SSF51735 42 331 1.54E-85 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 SMART SM00919 42 279 1.3E-136 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 ProSitePatterns PS00331 Malic enzymes signature. 38 54 - T 14-09-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 PIRSF PIRSF000106 1 311 5.4E-60 T 14-09-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 Gene3D G3DSA:3.40.50.720 40 327 3.0E-87 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 Gene3D G3DSA:3.40.50.10380 2 39 5.2E-8 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK01_RS29075 30341d6a80c844d7dde0e28921c8a060 336 PANTHER PTHR23406 2 330 5.9E-110 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 154 178 4.6E-9 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 8 32 4.6E-9 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 99 119 4.6E-9 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 391 410 4.6E-9 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 PRINTS PR01036 Tetracycline resistance protein TetB signature 129 153 4.6E-9 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 8 410 1.2E-69 T 14-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 PANTHER PTHR23501:SF66 3 474 1.4E-152 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 SUPERFAMILY SSF103473 239 446 2.49E-59 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 SUPERFAMILY SSF103473 4 188 2.49E-59 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 Pfam PF07690 Major Facilitator Superfamily 9 400 9.7E-46 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 PANTHER PTHR23501 3 474 1.4E-152 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 Gene3D G3DSA:1.20.1250.20 7 183 1.5E-28 T 14-09-2016 AMK01_RS04060 1d17718bcedf52848df5125ef68403ed 474 Gene3D G3DSA:1.20.1250.20 248 448 1.5E-13 T 14-09-2016 AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 Pfam PF00005 ABC transporter 19 161 2.0E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 Pfam PF08402 TOBE domain 278 347 3.1E-9 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 Gene3D G3DSA:2.40.50.100 341 353 4.5E-10 T 14-09-2016 AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 Gene3D G3DSA:2.40.50.100 239 282 4.5E-10 T 14-09-2016 AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 SMART SM00382 28 219 1.2E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 SUPERFAMILY SSF50331 237 354 2.36E-25 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 Gene3D G3DSA:2.40.50.140 283 340 8.8E-11 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 SUPERFAMILY SSF52540 4 242 4.79E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 PANTHER PTHR24220:SF446 5 285 6.2E-150 T 14-09-2016 AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 Gene3D G3DSA:3.40.50.300 3 238 7.1E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 PANTHER PTHR24220 5 285 6.2E-150 T 14-09-2016 AMK01_RS17370 b3eaa3ca7b830a807bd3b12e3274717c 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12640 f4ecb56e4115638158d8c41e5db4ed9b 119 Gene3D G3DSA:3.10.180.10 12 118 3.6E-25 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS12640 f4ecb56e4115638158d8c41e5db4ed9b 119 PANTHER PTHR33993 3 116 2.2E-48 T 14-09-2016 AMK01_RS12640 f4ecb56e4115638158d8c41e5db4ed9b 119 SUPERFAMILY SSF54593 9 117 4.56E-24 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS12640 f4ecb56e4115638158d8c41e5db4ed9b 119 PANTHER PTHR33993:SF1 3 116 2.2E-48 T 14-09-2016 AMK01_RS12640 f4ecb56e4115638158d8c41e5db4ed9b 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 114 7.1E-8 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 PANTHER PTHR10264:SF27 8 303 1.2E-113 T 14-09-2016 AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 SUPERFAMILY SSF117892 55 188 2.75E-42 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 PRINTS PR00721 Stomatin signature 133 156 1.2E-32 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 PRINTS PR00721 Stomatin signature 30 52 1.2E-32 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 PRINTS PR00721 Stomatin signature 157 175 1.2E-32 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 PRINTS PR00721 Stomatin signature 78 99 1.2E-32 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 PRINTS PR00721 Stomatin signature 113 130 1.2E-32 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 PRINTS PR00721 Stomatin signature 176 197 1.2E-32 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 SMART SM00244 23 181 1.7E-55 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 Pfam PF01145 SPFH domain / Band 7 family 27 196 4.0E-36 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS18350 bdb4e985f6546fb63122fdd0a9532746 343 PANTHER PTHR10264 8 303 1.2E-113 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS17545 c92aa7ee7e2d5f87a8ff99a03238393e 333 PANTHER PTHR11432:SF3 2 333 4.5E-143 T 14-09-2016 AMK01_RS17545 c92aa7ee7e2d5f87a8ff99a03238393e 333 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 52 67 - T 14-09-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 AMK01_RS17545 c92aa7ee7e2d5f87a8ff99a03238393e 333 Pfam PF00146 NADH dehydrogenase 13 323 1.2E-122 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK01_RS17545 c92aa7ee7e2d5f87a8ff99a03238393e 333 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 6 330 25.262 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK01_RS17545 c92aa7ee7e2d5f87a8ff99a03238393e 333 PANTHER PTHR11432 2 333 4.5E-143 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK01_RS08870 fd6b1d02b78db3717613b5c65125a40d 280 SUPERFAMILY SSF52402 1 146 4.35E-9 T 14-09-2016 AMK01_RS08870 fd6b1d02b78db3717613b5c65125a40d 280 SUPERFAMILY SSF52402 153 273 3.52E-14 T 14-09-2016 AMK01_RS08870 fd6b1d02b78db3717613b5c65125a40d 280 Pfam PF00582 Universal stress protein family 3 115 1.9E-5 T 14-09-2016 IPR006016 UspA GO:0006950 AMK01_RS08870 fd6b1d02b78db3717613b5c65125a40d 280 Gene3D G3DSA:3.40.50.620 1 114 4.8E-7 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS08870 fd6b1d02b78db3717613b5c65125a40d 280 Gene3D G3DSA:3.40.50.620 140 273 7.9E-12 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 SUPERFAMILY SSF53474 4 301 3.38E-50 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PANTHER PTHR10992:SF860 194 200 3.3E-85 T 14-09-2016 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PANTHER PTHR10992:SF860 1 171 3.3E-85 T 14-09-2016 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 Gene3D G3DSA:3.40.50.1820 8 304 9.1E-55 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PANTHER PTHR10992 216 320 3.3E-85 T 14-09-2016 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PIRSF PIRSF006431 1 320 2.1E-112 T 14-09-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 317 2.4E-101 T 14-09-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 Pfam PF00561 alpha/beta hydrolase fold 38 300 6.0E-21 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PANTHER PTHR10992 194 200 3.3E-85 T 14-09-2016 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PANTHER PTHR10992 1 171 3.3E-85 T 14-09-2016 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 8.0E-13 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 8.0E-13 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 111 125 8.0E-13 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK01_RS11315 1565e48b6a3e6c4fea0ec05f42ec77a4 323 PANTHER PTHR10992:SF860 216 320 3.3E-85 T 14-09-2016 AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 Pfam PF00687 Ribosomal protein L1p/L10e family 29 218 2.4E-53 T 14-09-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 224 4.3E-100 T 14-09-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 Gene3D G3DSA:3.40.50.790 67 157 7.6E-41 T 14-09-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 PANTHER PTHR23105:SF51 15 230 6.1E-87 T 14-09-2016 AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 PIRSF PIRSF002155 1 225 3.1E-79 T 14-09-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 PANTHER PTHR23105 15 230 6.1E-87 T 14-09-2016 AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 227 43.178 T 14-09-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 SUPERFAMILY SSF56808 4 223 5.23E-84 T 14-09-2016 IPR023674 Ribosomal protein L1-like AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 Gene3D G3DSA:3.30.190.20 159 224 5.3E-47 T 14-09-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 Gene3D G3DSA:3.30.190.20 16 66 5.3E-47 T 14-09-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AMK01_RS08395 2ec7dc6bb9bfc07516201bf21eb62736 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 118 137 - T 14-09-2016 IPR023673 Ribosomal protein L1, conserved site AMK01_RS01930 5850fa918177362991698da267cf38bc 459 Gene3D G3DSA:2.30.40.10 4 71 4.5E-11 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS01930 5850fa918177362991698da267cf38bc 459 PANTHER PTHR11647:SF1 5 451 4.1E-79 T 14-09-2016 AMK01_RS01930 5850fa918177362991698da267cf38bc 459 SUPERFAMILY SSF51556 55 376 9.23E-74 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS01930 5850fa918177362991698da267cf38bc 459 Pfam PF01979 Amidohydrolase family 52 411 1.3E-16 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS01930 5850fa918177362991698da267cf38bc 459 PANTHER PTHR11647 5 451 4.1E-79 T 14-09-2016 AMK01_RS01930 5850fa918177362991698da267cf38bc 459 SUPERFAMILY SSF51338 6 54 4.18E-19 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS01930 5850fa918177362991698da267cf38bc 459 SUPERFAMILY SSF51338 376 447 4.18E-19 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS01930 5850fa918177362991698da267cf38bc 459 Gene3D G3DSA:2.30.40.10 360 438 5.9E-9 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS01930 5850fa918177362991698da267cf38bc 459 Gene3D G3DSA:3.20.20.140 72 359 1.4E-68 T 14-09-2016 AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 218 8.2E-50 T 14-09-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.2E-5 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.2E-5 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.2E-5 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 PANTHER PTHR18901 8 220 2.0E-46 T 14-09-2016 AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 Gene3D G3DSA:1.10.150.240 22 87 2.2E-12 T 14-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 Gene3D G3DSA:3.40.50.1000 8 20 4.5E-37 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 Gene3D G3DSA:3.40.50.1000 92 220 4.5E-37 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 185 1.0E-6 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 SUPERFAMILY SSF56784 8 220 5.2E-54 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 192 2.5E-34 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS12155 15442277d19ca0df329668e39d39838b 234 PANTHER PTHR18901:SF14 8 220 2.0E-46 T 14-09-2016 AMK01_RS01100 6fcf138f1bc0565b6e6cbae96fde6693 367 PANTHER PTHR32196:SF30 1 345 2.4E-83 T 14-09-2016 AMK01_RS01100 6fcf138f1bc0565b6e6cbae96fde6693 367 PANTHER PTHR32196 1 345 2.4E-83 T 14-09-2016 AMK01_RS01100 6fcf138f1bc0565b6e6cbae96fde6693 367 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 346 8.1E-32 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 SUPERFAMILY SSF56059 97 304 2.89E-50 T 14-09-2016 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 243 275 - T 14-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 PIRSF PIRSF039102 47 307 7.6E-73 T 14-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 Gene3D G3DSA:3.30.470.20 175 304 7.6E-49 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 Gene3D G3DSA:3.30.470.20 87 104 7.6E-49 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 Pfam PF01820 D-ala D-ala ligase N-terminus 6 85 4.3E-22 T 14-09-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 64 75 - T 14-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 305 35.102 T 14-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 304 4.9E-87 T 14-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 SUPERFAMILY SSF52440 3 97 3.84E-32 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 Gene3D G3DSA:3.40.50.20 3 85 3.1E-30 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 Pfam PF07478 D-ala D-ala ligase C-terminus 128 301 4.6E-43 T 14-09-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 PANTHER PTHR23132 1 304 8.9E-78 T 14-09-2016 AMK01_RS14595 47d14f6a09a0e19bc7f62168b372c865 308 Gene3D G3DSA:3.30.1490.20 107 174 1.1E-12 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS18825 352b44356d02c775abbf1dd80b534441 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 324 4.8E-41 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS18825 352b44356d02c775abbf1dd80b534441 334 PANTHER PTHR32196:SF21 1 334 2.4E-71 T 14-09-2016 AMK01_RS18825 352b44356d02c775abbf1dd80b534441 334 PANTHER PTHR32196 1 334 2.4E-71 T 14-09-2016 AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 SUPERFAMILY SSF56784 6 196 5.09E-32 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 Gene3D G3DSA:3.40.50.1000 5 197 9.3E-30 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 PANTHER PTHR12725 1 197 5.8E-24 T 14-09-2016 AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 186 4.4E-15 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 PANTHER PTHR12725:SF63 1 197 5.8E-24 T 14-09-2016 AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 67 185 7.3E-10 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 176 189 3.1E-6 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 3.1E-6 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.1E-6 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS05050 97753bf9d9f2ca573631aefae6139b57 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 3.1E-6 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 SUPERFAMILY SSF46785 10 73 3.24E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 Gene3D G3DSA:3.30.420.40 80 218 7.7E-36 T 14-09-2016 AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 PANTHER PTHR18964 59 381 1.7E-56 T 14-09-2016 AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 58 5.3E-7 T 14-09-2016 AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 PANTHER PTHR18964:SF123 59 381 1.7E-56 T 14-09-2016 AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 Gene3D G3DSA:3.30.420.40 219 356 3.2E-44 T 14-09-2016 AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 SUPERFAMILY SSF53067 84 378 1.6E-48 T 14-09-2016 AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 Gene3D G3DSA:1.10.10.10 10 77 2.4E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13665 a6bf953be81ef01ac2c4f3ca6434462a 403 Pfam PF00480 ROK family 118 377 5.6E-48 T 14-09-2016 IPR000600 ROK family AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 SUPERFAMILY SSF53850 91 280 8.79E-30 T 14-09-2016 AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 Gene3D G3DSA:1.10.10.10 5 88 2.0E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 PANTHER PTHR30579:SF0 1 296 6.9E-76 T 14-09-2016 AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.4E-20 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 Gene3D G3DSA:3.40.190.10 89 186 4.3E-23 T 14-09-2016 AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 PANTHER PTHR30579 1 296 6.9E-76 T 14-09-2016 AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 Gene3D G3DSA:3.40.190.10 187 244 1.2E-6 T 14-09-2016 AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 SUPERFAMILY SSF46785 5 113 8.81E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 Pfam PF03466 LysR substrate binding domain 90 266 2.4E-30 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS04090 aa97a1cea54ec98ca01823f3f837ecff 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 SUPERFAMILY SSF53271 262 481 4.72E-74 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 Pfam PF13537 Glutamine amidotransferase domain 102 219 1.3E-18 T 14-09-2016 IPR017932 Glutamine amidotransferase type 2 domain AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 Gene3D G3DSA:3.40.50.2020 282 450 1.4E-45 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 Pfam PF00156 Phosphoribosyl transferase domain 300 398 3.0E-9 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 PANTHER PTHR11907:SF0 19 487 3.2E-212 T 14-09-2016 AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 Gene3D G3DSA:3.60.20.10 22 269 1.5E-58 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 21 475 45.583 T 14-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 22 474 7.0E-145 T 14-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 PIRSF PIRSF000485 18 488 1.4E-159 T 14-09-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 SUPERFAMILY SSF56235 22 239 2.32E-64 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS07310 e68b23549e1639819a47e6954c720b02 496 PANTHER PTHR11907 19 487 3.2E-212 T 14-09-2016 AMK01_RS03555 db36b6e7f29963509d1b2c52eb128dcc 302 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 137 9.5E-30 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03555 db36b6e7f29963509d1b2c52eb128dcc 302 PRINTS PR00207 Flagellin signature 36 53 6.5E-5 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03555 db36b6e7f29963509d1b2c52eb128dcc 302 PRINTS PR00207 Flagellin signature 107 130 6.5E-5 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03555 db36b6e7f29963509d1b2c52eb128dcc 302 Gene3D G3DSA:1.20.1330.10 53 169 1.9E-15 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03555 db36b6e7f29963509d1b2c52eb128dcc 302 Gene3D G3DSA:1.20.1330.10 203 252 1.9E-15 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03555 db36b6e7f29963509d1b2c52eb128dcc 302 Pfam PF00700 Bacterial flagellin C-terminal helical region 216 299 5.8E-17 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03555 db36b6e7f29963509d1b2c52eb128dcc 302 SUPERFAMILY SSF64518 1 301 8.5E-65 T 14-09-2016 AMK01_RS02730 518f4d6a598fb0944cf49bb451b456af 271 PANTHER PTHR24220:SF585 25 269 1.1E-138 T 14-09-2016 AMK01_RS02730 518f4d6a598fb0944cf49bb451b456af 271 SUPERFAMILY SSF52540 27 258 2.37E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02730 518f4d6a598fb0944cf49bb451b456af 271 PANTHER PTHR24220 25 269 1.1E-138 T 14-09-2016 AMK01_RS02730 518f4d6a598fb0944cf49bb451b456af 271 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 271 1.1E-123 T 14-09-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AMK01_RS02730 518f4d6a598fb0944cf49bb451b456af 271 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS02730 518f4d6a598fb0944cf49bb451b456af 271 Gene3D G3DSA:3.40.50.300 27 265 1.1E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02730 518f4d6a598fb0944cf49bb451b456af 271 Pfam PF00005 ABC transporter 41 195 1.6E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS02730 518f4d6a598fb0944cf49bb451b456af 271 SMART SM00382 48 242 3.0E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS04280 5f0abed99bfcd255e176f7977a776ebb 159 Gene3D G3DSA:3.10.590.10 4 136 5.5E-37 T 14-09-2016 IPR002740 EVE domain AMK01_RS04280 5f0abed99bfcd255e176f7977a776ebb 159 Pfam PF01878 EVE domain 4 134 5.4E-17 T 14-09-2016 IPR002740 EVE domain AMK01_RS04280 5f0abed99bfcd255e176f7977a776ebb 159 Hamap MF_00771 UPF0310 protein . 2 136 28.206 T 14-09-2016 IPR022996 Uncharacterised protein family UPF0310 AMK01_RS04280 5f0abed99bfcd255e176f7977a776ebb 159 SUPERFAMILY SSF88697 5 136 2.83E-32 T 14-09-2016 IPR015947 PUA-like domain AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 SUPERFAMILY SSF55073 278 432 3.69E-45 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 PANTHER PTHR26402 142 253 3.4E-31 T 14-09-2016 AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 SUPERFAMILY SSF52172 18 140 9.11E-15 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 SUPERFAMILY SSF52172 141 278 8.25E-32 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 SMART SM00448 142 256 4.1E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 SMART SM00448 19 133 8.3E-5 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 Pfam PF00072 Response regulator receiver domain 144 256 7.4E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 Pfam PF00072 Response regulator receiver domain 21 129 2.8E-6 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 271 432 2.5E-42 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 SMART SM00267 262 434 4.9E-50 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 273 430 1.0E-40 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 Gene3D G3DSA:3.40.50.2300 19 140 1.4E-13 T 14-09-2016 AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 Gene3D G3DSA:3.40.50.2300 141 265 6.8E-31 T 14-09-2016 AMK01_RS12880 6c1a9c368208a11c21d1b4eab95cd68c 443 Gene3D G3DSA:3.30.70.270 276 440 4.7E-49 T 14-09-2016 AMK01_RS03015 60eecc67487a078c38b927cb3f3302e1 344 PANTHER PTHR10366 2 321 2.0E-98 T 14-09-2016 AMK01_RS03015 60eecc67487a078c38b927cb3f3302e1 344 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 253 7.8E-58 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS03015 60eecc67487a078c38b927cb3f3302e1 344 Gene3D G3DSA:3.90.25.10 255 321 2.9E-38 T 14-09-2016 AMK01_RS03015 60eecc67487a078c38b927cb3f3302e1 344 Gene3D G3DSA:3.90.25.10 172 223 2.9E-38 T 14-09-2016 AMK01_RS03015 60eecc67487a078c38b927cb3f3302e1 344 PANTHER PTHR10366:SF39 2 321 2.0E-98 T 14-09-2016 AMK01_RS03015 60eecc67487a078c38b927cb3f3302e1 344 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 322 1.0E-124 T 14-09-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 AMK01_RS03015 60eecc67487a078c38b927cb3f3302e1 344 Gene3D G3DSA:3.40.50.720 1 171 1.4E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03015 60eecc67487a078c38b927cb3f3302e1 344 SUPERFAMILY SSF51735 1 321 1.87E-90 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 PANTHER PTHR30435 1 262 3.2E-117 T 14-09-2016 AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 SUPERFAMILY SSF117143 92 222 3.14E-35 T 14-09-2016 AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 143 243 9.1E-32 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.5E-46 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 PANTHER PTHR30435:SF19 1 262 3.2E-117 T 14-09-2016 AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 255 4.2E-27 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 Pfam PF00460 Flagella basal body rod protein 5 34 7.9E-13 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 14-09-2016 IPR019776 Flagellar basal body rod protein, conserved site AMK01_RS03500 0489566145353fa2c393454cd835ff78 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 260 1.8E-112 T 14-09-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 SUPERFAMILY SSF46785 6 92 1.25E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 Gene3D G3DSA:1.10.10.10 5 86 8.5E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.7E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.7E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.7E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 Gene3D G3DSA:3.40.190.10 184 259 2.2E-12 T 14-09-2016 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 Pfam PF03466 LysR substrate binding domain 92 296 2.1E-27 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 PANTHER PTHR30126:SF29 5 293 8.5E-66 T 14-09-2016 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 SUPERFAMILY SSF53850 93 299 6.21E-29 T 14-09-2016 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 Gene3D G3DSA:3.40.190.10 94 183 1.3E-11 T 14-09-2016 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 67 1.8E-19 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS08920 944036656c4b350c4845a880bef735e1 322 PANTHER PTHR30126 5 293 8.5E-66 T 14-09-2016 AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 PRINTS PR00107 Phosphocarrier protein signature 72 89 1.4E-7 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 PRINTS PR00107 Phosphocarrier protein signature 57 72 1.4E-7 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 PRINTS PR00107 Phosphocarrier protein signature 30 46 1.4E-7 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 20 101 4.0E-18 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 PANTHER PTHR33705 16 108 1.3E-25 T 14-09-2016 AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 Pfam PF00381 PTS HPr component phosphorylation site 20 101 2.0E-18 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 SUPERFAMILY SSF55594 20 107 5.23E-21 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 PANTHER PTHR33705:SF2 16 108 1.3E-25 T 14-09-2016 AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 Gene3D G3DSA:3.30.1340.10 20 107 7.1E-23 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS13000 2ecd442fb4ea573f7c97294711df87ba 114 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 30 37 - T 14-09-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 Gene3D G3DSA:2.160.20.10 34 376 1.5E-32 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 297 319 5000.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 90 112 620.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 140 162 0.33 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 216 237 100.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 113 139 1900.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 163 188 200.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 189 209 2200.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 268 289 150.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00710 238 264 460.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 Pfam PF13229 Right handed beta helix region 165 329 1.9E-11 T 14-09-2016 AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SUPERFAMILY SSF51126 19 362 2.06E-50 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00722 43 182 0.17 T 14-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AMK01_RS13380 dde1a865a9daf3cc707ad05be74a1f7a 490 SMART SM00722 193 346 0.39 T 14-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AMK01_RS08505 92588c53fa675cddb12b9c685448daf2 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 4.7E-35 T 14-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08505 92588c53fa675cddb12b9c685448daf2 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 100 4.4E-25 T 14-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08505 92588c53fa675cddb12b9c685448daf2 102 Pfam PF00467 KOW motif 6 36 9.5E-7 T 14-09-2016 IPR005824 KOW AMK01_RS08505 92588c53fa675cddb12b9c685448daf2 102 SUPERFAMILY SSF50104 3 99 5.27E-31 T 14-09-2016 IPR008991 Translation protein SH3-like domain AMK01_RS08505 92588c53fa675cddb12b9c685448daf2 102 PANTHER PTHR12903 3 101 1.2E-40 T 14-09-2016 AMK01_RS08505 92588c53fa675cddb12b9c685448daf2 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 21.505 T 14-09-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08505 92588c53fa675cddb12b9c685448daf2 102 Gene3D G3DSA:2.30.30.30 3 89 1.0E-22 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AMK01_RS08505 92588c53fa675cddb12b9c685448daf2 102 SMART SM00739 3 30 1.0E-5 T 14-09-2016 IPR005824 KOW AMK01_RS02150 6e9a247d42350832db1aca0ddba9282a 291 SUPERFAMILY SSF55729 35 258 6.33E-41 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS02150 6e9a247d42350832db1aca0ddba9282a 291 Gene3D G3DSA:3.40.630.30 37 181 1.0E-23 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS02150 6e9a247d42350832db1aca0ddba9282a 291 Pfam PF13444 Acetyltransferase (GNAT) domain 52 162 2.6E-33 T 14-09-2016 AMK01_RS02150 6e9a247d42350832db1aca0ddba9282a 291 PANTHER PTHR37323:SF1 35 282 1.9E-40 T 14-09-2016 AMK01_RS02150 6e9a247d42350832db1aca0ddba9282a 291 PANTHER PTHR37323 35 282 1.9E-40 T 14-09-2016 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 Gene3D G3DSA:3.90.400.10 106 173 4.7E-21 T 14-09-2016 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 Gene3D G3DSA:3.20.20.80 8 105 3.2E-93 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 Gene3D G3DSA:3.20.20.80 181 453 3.2E-93 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 Gene3D G3DSA:2.60.40.1180 460 541 6.6E-4 T 14-09-2016 IPR013780 Glycosyl hydrolase, all-beta AMK01_RS11575 e2f304973622138ead6377053a30b002 553 PANTHER PTHR10357 3 399 4.6E-200 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 SUPERFAMILY SSF51445 20 460 2.94E-110 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS11575 e2f304973622138ead6377053a30b002 553 PRINTS PR00110 Alpha-amylase signature 93 104 1.0E-4 T 14-09-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 PRINTS PR00110 Alpha-amylase signature 195 206 1.0E-4 T 14-09-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 PRINTS PR00110 Alpha-amylase signature 300 312 1.0E-4 T 14-09-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 PANTHER PTHR10357 436 541 4.6E-200 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 Pfam PF00128 Alpha amylase, catalytic domain 29 383 2.5E-73 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 SUPERFAMILY SSF51011 460 541 1.62E-7 T 14-09-2016 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 PANTHER PTHR10357:SF164 436 541 4.6E-200 T 14-09-2016 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 PANTHER PTHR10357:SF164 3 399 4.6E-200 T 14-09-2016 AMK01_RS11575 e2f304973622138ead6377053a30b002 553 SMART SM00642 14 418 4.6E-86 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS02450 1304ed0c028437a6f648e75daa065bbc 345 Pfam PF05544 Proline racemase 10 332 2.4E-121 T 14-09-2016 IPR008794 Proline racemase family AMK01_RS02450 1304ed0c028437a6f648e75daa065bbc 345 PANTHER PTHR33442 1 335 1.2E-105 T 14-09-2016 AMK01_RS02450 1304ed0c028437a6f648e75daa065bbc 345 Gene3D G3DSA:3.10.310.10 158 320 9.1E-56 T 14-09-2016 AMK01_RS02450 1304ed0c028437a6f648e75daa065bbc 345 PIRSF PIRSF029792 1 335 1.0E-118 T 14-09-2016 IPR008794 Proline racemase family AMK01_RS02450 1304ed0c028437a6f648e75daa065bbc 345 PANTHER PTHR33442:SF2 1 335 1.2E-105 T 14-09-2016 AMK01_RS02450 1304ed0c028437a6f648e75daa065bbc 345 SUPERFAMILY SSF54506 1 332 5.42E-97 T 14-09-2016 AMK01_RS02450 1304ed0c028437a6f648e75daa065bbc 345 Gene3D G3DSA:3.10.310.10 1 157 3.3E-57 T 14-09-2016 AMK01_RS02920 acbf05488698d1d64613642d9299b340 185 Gene3D G3DSA:3.40.430.10 3 182 4.8E-30 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS02920 acbf05488698d1d64613642d9299b340 185 PANTHER PTHR38011:SF2 2 185 5.6E-42 T 14-09-2016 AMK01_RS02920 acbf05488698d1d64613642d9299b340 185 Pfam PF01872 RibD C-terminal domain 3 176 2.7E-21 T 14-09-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMK01_RS02920 acbf05488698d1d64613642d9299b340 185 SUPERFAMILY SSF53597 2 183 3.8E-31 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS02920 acbf05488698d1d64613642d9299b340 185 PANTHER PTHR38011 2 185 5.6E-42 T 14-09-2016 AMK01_RS16535 aa8bd68d10c0850232dba6b3d5abdb75 235 Pfam PF07812 TfuA-like protein 47 166 2.2E-42 T 14-09-2016 IPR012924 TfuA-like, core AMK01_RS00080 14b6e54a2decf4e36bea231969a0e2cd 319 Gene3D G3DSA:3.40.30.10 43 178 2.4E-16 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS00080 14b6e54a2decf4e36bea231969a0e2cd 319 Gene3D G3DSA:1.20.1050.10 179 290 4.1E-19 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS00080 14b6e54a2decf4e36bea231969a0e2cd 319 SUPERFAMILY SSF47616 170 300 1.81E-24 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS00080 14b6e54a2decf4e36bea231969a0e2cd 319 SUPERFAMILY SSF52833 45 163 4.48E-12 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS00080 14b6e54a2decf4e36bea231969a0e2cd 319 Pfam PF13410 Glutathione S-transferase, C-terminal domain 206 277 1.4E-9 T 14-09-2016 AMK01_RS00080 14b6e54a2decf4e36bea231969a0e2cd 319 Pfam PF13409 Glutathione S-transferase, N-terminal domain 64 159 1.1E-20 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS00080 14b6e54a2decf4e36bea231969a0e2cd 319 PIRSF PIRSF015753 5 318 8.2E-112 T 14-09-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AMK01_RS00080 14b6e54a2decf4e36bea231969a0e2cd 319 PANTHER PTHR32419 1 315 2.7E-141 T 14-09-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 Gene3D G3DSA:1.10.3730.10 168 273 2.9E-34 T 14-09-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 PANTHER PTHR11645 15 273 4.4E-87 T 14-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 168 273 1.4E-32 T 14-09-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 SUPERFAMILY SSF48179 168 273 1.38E-30 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 SUPERFAMILY SSF51735 12 165 1.37E-29 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 12 105 2.0E-14 T 14-09-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 PIRSF PIRSF000193 10 275 9.7E-63 T 14-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 10 273 25.434 T 14-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 12 273 3.0E-78 T 14-09-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 Gene3D G3DSA:3.40.50.720 12 165 9.2E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15375 6ff7e69fe72e34585937bb71b3185d38 275 PANTHER PTHR11645:SF0 15 273 4.4E-87 T 14-09-2016 AMK01_RS00300 394a39aefd440b82da891c8949580f30 315 PANTHER PTHR13812 1 309 1.0E-89 T 14-09-2016 AMK01_RS00300 394a39aefd440b82da891c8949580f30 315 Gene3D G3DSA:3.30.1780.10 1 135 2.6E-44 T 14-09-2016 IPR023401 Ornithine cyclodeaminase, N-terminal AMK01_RS00300 394a39aefd440b82da891c8949580f30 315 PANTHER PTHR13812:SF19 1 309 1.0E-89 T 14-09-2016 AMK01_RS00300 394a39aefd440b82da891c8949580f30 315 PIRSF PIRSF001439 1 315 1.1E-71 T 14-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMK01_RS00300 394a39aefd440b82da891c8949580f30 315 SUPERFAMILY SSF51735 1 311 1.08E-94 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00300 394a39aefd440b82da891c8949580f30 315 Gene3D G3DSA:3.40.50.720 136 295 3.4E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00300 394a39aefd440b82da891c8949580f30 315 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 314 5.5E-70 T 14-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 7 378 1.5E-158 T 14-09-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 PANTHER PTHR11271:SF43 6 378 7.0E-106 T 14-09-2016 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 Gene3D G3DSA:2.30.40.10 4 80 4.4E-13 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 Pfam PF07969 Amidohydrolase family 280 357 1.5E-7 T 14-09-2016 IPR013108 Amidohydrolase 3 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 PANTHER PTHR11271 6 378 7.0E-106 T 14-09-2016 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 PIRSF PIRSF038971 3 379 4.7E-140 T 14-09-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 Gene3D G3DSA:2.30.40.10 288 361 4.3E-8 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 SUPERFAMILY SSF51338 346 378 6.48E-14 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 SUPERFAMILY SSF51338 3 52 6.48E-14 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS00930 7c46d83fc68e103d73cf8e9a700bda3f 379 SUPERFAMILY SSF51556 52 346 5.29E-16 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PANTHER PTHR30386:SF3 8 109 4.8E-111 T 14-09-2016 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PANTHER PTHR30386 8 109 4.8E-111 T 14-09-2016 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PANTHER PTHR30386:SF3 146 435 4.8E-111 T 14-09-2016 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 Pfam PF13437 HlyD family secretion protein 287 398 1.1E-18 T 14-09-2016 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 Pfam PF13533 Biotin-lipoyl like 58 103 7.2E-9 T 14-09-2016 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 Gene3D G3DSA:2.40.50.100 284 319 4.6E-15 T 14-09-2016 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 Gene3D G3DSA:2.40.50.100 57 88 4.6E-15 T 14-09-2016 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 15 435 5.2E-119 T 14-09-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 24 47 4.4E-55 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 399 414 4.4E-55 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 379 4.4E-55 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 86 4.4E-55 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 414 434 4.4E-55 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 299 320 4.4E-55 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 356 4.4E-55 T 14-09-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMK01_RS16650 8ec534be626564a6357facdfebf0048e 435 PANTHER PTHR30386 146 435 4.8E-111 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 SUPERFAMILY SSF82693 42 136 2.3E-17 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 PANTHER PTHR32063:SF18 3 1018 0.0 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 Gene3D G3DSA:1.10.3850.10 799 1011 1.4E-46 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 Gene3D G3DSA:1.10.3850.10 276 488 3.6E-42 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 SUPERFAMILY SSF82693 554 604 6.1E-7 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 SUPERFAMILY SSF82714 707 792 6.41E-12 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 SUPERFAMILY SSF82693 141 184 4.19E-16 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 SUPERFAMILY SSF82693 270 325 4.19E-16 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 Gene3D G3DSA:3.30.70.1430 558 600 2.6E-5 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 SUPERFAMILY SSF82866 297 490 1.03E-33 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 PANTHER PTHR32063 3 1018 0.0 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 Gene3D G3DSA:3.30.2090.10 706 793 1.8E-9 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1007 1.6E-138 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 SUPERFAMILY SSF82714 186 268 2.09E-13 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 Gene3D G3DSA:3.30.2090.10 186 269 3.6E-13 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.8E-18 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.8E-18 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.8E-18 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.8E-18 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 SUPERFAMILY SSF82866 791 1014 6.93E-43 T 14-09-2016 AMK01_RS02795 09072dc81df7d4b465eeaae8c3038ded 1036 Gene3D G3DSA:3.30.70.1430 42 145 1.1E-18 T 14-09-2016 AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PANTHER PTHR11206 506 514 2.4E-50 T 14-09-2016 AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PIRSF PIRSF002869 1 518 1.2E-143 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PRINTS PR01806 Virulence factor MviN signature 158 179 3.1E-74 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PRINTS PR01806 Virulence factor MviN signature 360 379 3.1E-74 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PRINTS PR01806 Virulence factor MviN signature 262 288 3.1E-74 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PRINTS PR01806 Virulence factor MviN signature 412 429 3.1E-74 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PRINTS PR01806 Virulence factor MviN signature 134 158 3.1E-74 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PRINTS PR01806 Virulence factor MviN signature 52 68 3.1E-74 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PRINTS PR01806 Virulence factor MviN signature 33 52 3.1E-74 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 514 8.4E-145 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PANTHER PTHR11206 221 443 2.4E-50 T 14-09-2016 AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PANTHER PTHR11206 119 124 2.4E-50 T 14-09-2016 AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 Pfam PF03023 MviN-like protein 28 474 4.1E-118 T 14-09-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PANTHER PTHR11206 77 87 2.4E-50 T 14-09-2016 AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PANTHER PTHR11206:SF90 506 514 2.4E-50 T 14-09-2016 AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PANTHER PTHR11206:SF90 77 87 2.4E-50 T 14-09-2016 AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PANTHER PTHR11206:SF90 221 443 2.4E-50 T 14-09-2016 AMK01_RS02125 4bc98a807d8a4010c997fae72d8bfbe2 526 PANTHER PTHR11206:SF90 119 124 2.4E-50 T 14-09-2016 AMK01_RS21000 02d6e5400b04952e1d0eeb8b53fffc3c 301 PIRSF PIRSF015582 1 301 6.6E-71 T 14-09-2016 IPR011206 Citrate lyase beta subunit-like AMK01_RS21000 02d6e5400b04952e1d0eeb8b53fffc3c 301 PANTHER PTHR32308:SF0 12 298 8.6E-75 T 14-09-2016 AMK01_RS21000 02d6e5400b04952e1d0eeb8b53fffc3c 301 SUPERFAMILY SSF51621 12 242 9.42E-61 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS21000 02d6e5400b04952e1d0eeb8b53fffc3c 301 PANTHER PTHR32308 12 298 8.6E-75 T 14-09-2016 IPR011206 Citrate lyase beta subunit-like AMK01_RS21000 02d6e5400b04952e1d0eeb8b53fffc3c 301 Gene3D G3DSA:3.20.20.60 10 242 7.7E-70 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS21000 02d6e5400b04952e1d0eeb8b53fffc3c 301 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 14 232 6.0E-39 T 14-09-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PANTHER PTHR11606:SF1 1111 1356 0.0 T 14-09-2016 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 Gene3D G3DSA:3.40.50.720 931 1042 3.5E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 Gene3D G3DSA:3.40.50.720 1097 1169 3.5E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PANTHER PTHR11606:SF1 87 144 0.0 T 14-09-2016 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PIRSF PIRSF036761 1 1590 0.0 T 14-09-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PANTHER PTHR11606 1111 1356 0.0 T 14-09-2016 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 SUPERFAMILY SSF53223 743 929 3.74E-23 T 14-09-2016 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PANTHER PTHR11606:SF1 208 547 0.0 T 14-09-2016 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PANTHER PTHR11606 87 144 0.0 T 14-09-2016 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PANTHER PTHR11606 208 547 0.0 T 14-09-2016 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 85 1582 0.0 T 14-09-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 SUPERFAMILY SSF51735 934 1036 1.12E-25 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 SUPERFAMILY SSF51735 1072 1270 1.12E-25 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PANTHER PTHR11606:SF1 660 1086 0.0 T 14-09-2016 AMK01_RS21095 2a939c8bbb98bd099c7dbf2f815a4550 1591 PANTHER PTHR11606 660 1086 0.0 T 14-09-2016 AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 SUPERFAMILY SSF48008 107 240 1.75E-25 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 SUPERFAMILY SSF46785 15 85 5.77E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 Gene3D G3DSA:1.20.120.530 104 243 7.6E-27 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 Gene3D G3DSA:1.10.10.10 14 91 1.6E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 SMART SM00895 110 233 2.6E-22 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 9.8E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 9.8E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 PANTHER PTHR11751 21 88 8.6E-23 T 14-09-2016 AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 PANTHER PTHR11751 108 126 8.6E-23 T 14-09-2016 AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 81 4.5E-16 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 Pfam PF07729 FCD domain 110 229 2.3E-24 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 SMART SM00345 22 81 2.8E-15 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 PANTHER PTHR11751:SF436 21 88 8.6E-23 T 14-09-2016 AMK01_RS10720 400d010ec5f2268674454cf689a2a56a 261 PANTHER PTHR11751:SF436 108 126 8.6E-23 T 14-09-2016 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 SMART SM00342 218 301 2.0E-24 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 PANTHER PTHR11019 27 309 5.3E-54 T 14-09-2016 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 SUPERFAMILY SSF46689 254 303 4.44E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 Pfam PF12852 Cupin 2 185 7.5E-41 T 14-09-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 SUPERFAMILY SSF51215 15 78 6.93E-5 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 Gene3D G3DSA:2.60.120.280 39 82 3.2E-4 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 Gene3D G3DSA:1.10.10.60 200 255 1.7E-7 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 285 8.0E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 301 8.0E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 255 297 - T 14-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 Gene3D G3DSA:1.10.10.60 256 303 8.6E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 Pfam PF12833 Helix-turn-helix domain 224 302 4.4E-18 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS16055 31191d22c7785d5c03b1921e4c103ccd 314 PANTHER PTHR11019:SF77 27 309 5.3E-54 T 14-09-2016 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Gene3D G3DSA:1.10.189.10 358 415 5.5E-31 T 14-09-2016 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Gene3D G3DSA:3.30.470.20 247 356 2.1E-38 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Gene3D G3DSA:3.20.20.60 545 884 1.8E-136 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 PANTHER PTHR22931 1 888 0.0 T 14-09-2016 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 SUPERFAMILY SSF51621 524 882 2.97E-128 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Gene3D G3DSA:1.20.80.30 115 201 2.3E-32 T 14-09-2016 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 21 372 8.4E-56 T 14-09-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 SUPERFAMILY SSF56059 1 393 6.47E-139 T 14-09-2016 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 774 792 - T 14-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Pfam PF00391 PEP-utilising enzyme, mobile domain 436 516 2.8E-28 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 530 882 5.1E-88 T 14-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 PANTHER PTHR22931:SF9 1 888 0.0 T 14-09-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 SUPERFAMILY SSF52009 402 525 8.89E-36 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 PIRSF PIRSF000853 1 888 0.0 T 14-09-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Gene3D G3DSA:3.30.1490.20 3 114 2.6E-52 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Gene3D G3DSA:3.30.1490.20 203 246 2.6E-52 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 884 0.0 T 14-09-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 463 474 - T 14-09-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMK01_RS05090 80688fa99251cb8561207002ecf24a69 888 Gene3D G3DSA:3.50.30.10 416 519 1.4E-38 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 SUPERFAMILY SSF52540 43 274 1.42E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 PANTHER PTHR24220 40 277 2.1E-126 T 14-09-2016 AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 PANTHER PTHR24220 5 15 2.1E-126 T 14-09-2016 AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 PANTHER PTHR24220:SF374 40 277 2.1E-126 T 14-09-2016 AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 PANTHER PTHR24220:SF374 5 15 2.1E-126 T 14-09-2016 AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 SMART SM00382 52 245 4.2E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 287 3.0E-163 T 14-09-2016 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 Gene3D G3DSA:3.40.50.300 40 269 4.0E-69 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 Pfam PF00005 ABC transporter 44 195 5.0E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS15720 0820d2e2668ee9558b552b08df238169 350 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS16000 becda849412e3f411c2662b6ef96c7d7 307 Pfam PF01522 Polysaccharide deacetylase 78 164 2.3E-8 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS16000 becda849412e3f411c2662b6ef96c7d7 307 SUPERFAMILY SSF88713 6 303 1.51E-86 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS16000 becda849412e3f411c2662b6ef96c7d7 307 Gene3D G3DSA:3.20.20.370 5 305 1.0E-101 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS16000 becda849412e3f411c2662b6ef96c7d7 307 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 303 1.3E-159 T 14-09-2016 IPR017625 Putative urate catabolism protein AMK01_RS16000 becda849412e3f411c2662b6ef96c7d7 307 PANTHER PTHR10587 11 305 2.5E-159 T 14-09-2016 AMK01_RS16000 becda849412e3f411c2662b6ef96c7d7 307 PANTHER PTHR10587:SF72 11 305 2.5E-159 T 14-09-2016 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 Pfam PF00773 RNB domain 293 618 5.5E-88 T 14-09-2016 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 SUPERFAMILY SSF50249 670 752 1.23E-16 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 PANTHER PTHR23355 173 759 1.6E-161 T 14-09-2016 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 157 740 9.3E-139 T 14-09-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 PANTHER PTHR23355:SF9 173 759 1.6E-161 T 14-09-2016 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 SMART SM00955 293 624 3.2E-156 T 14-09-2016 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 Pfam PF00575 S1 RNA binding domain 670 739 6.2E-8 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 Gene3D G3DSA:2.40.50.140 672 750 8.7E-14 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 SUPERFAMILY SSF50249 263 668 2.33E-128 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 ProSitePatterns PS01175 Ribonuclease II family signature. 591 615 - T 14-09-2016 IPR022966 Ribonuclease II/R, conserved site AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 SMART SM00316 670 753 4.9E-7 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 Gene3D G3DSA:1.10.10.10 45 99 2.3E-4 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 TIGRFAM TIGR02063 RNase_R: ribonuclease R 40 753 5.9E-210 T 14-09-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMK01_RS08265 b9024cf7a34b3ad099907aba03f3dd41 790 Hamap MF_01895 Ribonuclease R [rnr]. 59 753 51.807 T 14-09-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMK01_RS15750 673f59a8a13dd0c2c8fec94932c1e74c 99 Pfam PF13103 TonB C terminal 22 77 6.8E-6 T 14-09-2016 IPR006260 TonB, C-terminal GO:0006810 AMK01_RS15750 673f59a8a13dd0c2c8fec94932c1e74c 99 SUPERFAMILY SSF74653 28 80 5.89E-5 T 14-09-2016 AMK01_RS15750 673f59a8a13dd0c2c8fec94932c1e74c 99 Gene3D G3DSA:3.30.1150.10 27 74 1.2E-4 T 14-09-2016 AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 SUPERFAMILY SSF160996 195 341 1.44E-10 T 14-09-2016 AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 PANTHER PTHR22893 3 46 4.6E-13 T 14-09-2016 AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 Gene3D G3DSA:3.50.50.60 343 396 1.5E-40 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 Gene3D G3DSA:3.50.50.60 2 189 1.5E-40 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 394 6.9E-81 T 14-09-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 Pfam PF03486 HI0933-like protein 5 394 1.2E-96 T 14-09-2016 AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 SUPERFAMILY SSF51905 1 191 3.58E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 SUPERFAMILY SSF51905 340 396 3.58E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS19220 3a7126c9cf80d4c22c9e13423e252464 402 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 27 400 5.6E-156 T 14-09-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 SMART SM00382 28 213 1.4E-18 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 PANTHER PTHR24220 5 297 9.7E-116 T 14-09-2016 AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 Gene3D G3DSA:3.40.50.300 2 236 1.8E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 SUPERFAMILY SSF52540 3 239 7.76E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 SUPERFAMILY SSF50331 242 343 6.38E-8 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 PANTHER PTHR24220:SF282 5 297 9.7E-116 T 14-09-2016 AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 Pfam PF00005 ABC transporter 19 163 1.5E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20830 019668836aa6f0e6d91cb5c4abd2896f 345 Pfam PF08402 TOBE domain 271 337 2.8E-5 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 46 70 - T 14-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 14 338 2.8E-115 T 14-09-2016 IPR030830 5-dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92|UniPathway: UPA00076 AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 Pfam PF00294 pfkB family carbohydrate kinase 15 329 3.1E-45 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 PANTHER PTHR10584:SF194 1 362 6.6E-110 T 14-09-2016 AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 Gene3D G3DSA:3.40.1190.20 7 343 1.8E-82 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 282 295 - T 14-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 SUPERFAMILY SSF53613 14 338 1.47E-67 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 PANTHER PTHR10584 1 362 6.6E-110 T 14-09-2016 AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 333 640 1.3E-131 T 14-09-2016 IPR018659 Protein of unknown function DUF2090 AMK01_RS06860 a29f5bb39f843985af6abd26b0c08e84 644 Gene3D G3DSA:3.20.20.70 471 608 1.3E-4 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 PANTHER PTHR21015 6 361 7.6E-84 T 14-09-2016 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 187 352 6.9E-36 T 14-09-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 Gene3D G3DSA:3.40.50.2000 6 126 1.9E-6 T 14-09-2016 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 1.0E-30 T 14-09-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 PANTHER PTHR21015:SF22 6 361 7.6E-84 T 14-09-2016 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 SUPERFAMILY SSF53756 6 361 1.41E-99 T 14-09-2016 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 361 31.184 T 14-09-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 356 8.0E-80 T 14-09-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14615 3d5d9c1be18eacadc3e512bdc1f6fea2 374 Gene3D G3DSA:3.40.50.2000 156 342 5.2E-52 T 14-09-2016 AMK01_RS16980 391fd44d65fdaa8431510003eb469fbc 287 SMART SM00267 89 253 7.4E-40 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS16980 391fd44d65fdaa8431510003eb469fbc 287 SUPERFAMILY SSF55073 105 252 8.63E-36 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS16980 391fd44d65fdaa8431510003eb469fbc 287 Pfam PF00990 Diguanylate cyclase, GGDEF domain 101 249 2.2E-30 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS16980 391fd44d65fdaa8431510003eb469fbc 287 PANTHER PTHR10799:SF750 127 250 1.3E-18 T 14-09-2016 AMK01_RS16980 391fd44d65fdaa8431510003eb469fbc 287 PANTHER PTHR10799 127 250 1.3E-18 T 14-09-2016 AMK01_RS16980 391fd44d65fdaa8431510003eb469fbc 287 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 97 252 6.3E-35 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS16980 391fd44d65fdaa8431510003eb469fbc 287 Gene3D G3DSA:3.30.70.270 101 253 4.6E-38 T 14-09-2016 AMK01_RS13125 4ee67d9f3f8528f0687fef1710ae39e0 186 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 179 39.092 T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK01_RS13125 4ee67d9f3f8528f0687fef1710ae39e0 186 PANTHER PTHR11995 3 186 8.4E-118 T 14-09-2016 AMK01_RS13125 4ee67d9f3f8528f0687fef1710ae39e0 186 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 65 172 2.6E-23 T 14-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMK01_RS13125 4ee67d9f3f8528f0687fef1710ae39e0 186 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 39 180 1.3E-71 T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK01_RS13125 4ee67d9f3f8528f0687fef1710ae39e0 186 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 146 162 - T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK01_RS13125 4ee67d9f3f8528f0687fef1710ae39e0 186 Gene3D G3DSA:3.40.50.700 51 176 6.2E-32 T 14-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMK01_RS13125 4ee67d9f3f8528f0687fef1710ae39e0 186 PANTHER PTHR11995:SF22 3 186 8.4E-118 T 14-09-2016 AMK01_RS13125 4ee67d9f3f8528f0687fef1710ae39e0 186 SUPERFAMILY SSF56770 37 181 1.27E-64 T 14-09-2016 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Gene3D G3DSA:3.40.50.300 12 206 1.6E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Hamap MF_00071 Elongation factor 4 [lepA]. 1 610 305.235 T 14-09-2016 IPR006297 Elongation factor 4 GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Pfam PF00679 Elongation factor G C-terminus 412 497 6.4E-21 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Pfam PF06421 GTP-binding protein LepA C-terminus 500 606 2.4E-50 T 14-09-2016 IPR013842 GTP-binding protein LepA, C-terminal AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Pfam PF03144 Elongation factor Tu domain 2 218 288 1.2E-11 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 183 3.3E-19 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PRINTS PR00315 GTP-binding elongation factor signature 101 112 5.2E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.2E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.2E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PRINTS PR00315 GTP-binding elongation factor signature 17 30 5.2E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PRINTS PR00315 GTP-binding elongation factor signature 60 68 5.2E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 TIGRFAM TIGR01393 lepA: elongation factor 4 14 607 6.3E-293 T 14-09-2016 IPR006297 Elongation factor 4 GO:0005525 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Gene3D G3DSA:2.40.30.10 207 302 1.2E-25 T 14-09-2016 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PANTHER PTHR23115 410 608 0.0 T 14-09-2016 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 SUPERFAMILY SSF52540 7 244 1.13E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 SUPERFAMILY SSF54980 304 383 1.51E-18 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Pfam PF00009 Elongation factor Tu GTP binding domain 14 192 1.1E-52 T 14-09-2016 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 SUPERFAMILY SSF54980 412 506 8.15E-25 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PANTHER PTHR23115 1 386 0.0 T 14-09-2016 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Gene3D G3DSA:3.30.70.870 305 382 2.0E-26 T 14-09-2016 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PANTHER PTHR23115:SF175 410 608 0.0 T 14-09-2016 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 PANTHER PTHR23115:SF175 1 386 0.0 T 14-09-2016 AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 SMART SM00838 411 498 0.0037 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS01415 2bcd6b8174072567cedebd4e01e278ff 610 Gene3D G3DSA:3.30.70.240 414 502 2.2E-21 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 9.2E-27 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 3 225 2.0E-103 T 14-09-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 Gene3D G3DSA:3.40.50.2300 3 124 3.8E-38 T 14-09-2016 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 PANTHER PTHR26402 3 226 3.7E-88 T 14-09-2016 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 SUPERFAMILY SSF52172 3 125 3.84E-39 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 SMART SM00862 150 225 1.2E-25 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 SUPERFAMILY SSF46894 128 226 1.18E-31 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 Pfam PF00072 Response regulator receiver domain 5 117 6.2E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 SMART SM00448 3 116 6.7E-43 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 PANTHER PTHR26402:SF576 3 226 3.7E-88 T 14-09-2016 AMK01_RS02740 84f59c9cbf1d3b37469d0db27ec2d07a 227 Gene3D G3DSA:1.10.10.10 129 226 7.3E-35 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02435 a0244009a2ac57b9273c287769f45e0a 293 PRINTS PR00069 Aldo-keto reductase signature 219 243 3.2E-9 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS02435 a0244009a2ac57b9273c287769f45e0a 293 PRINTS PR00069 Aldo-keto reductase signature 148 165 3.2E-9 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS02435 a0244009a2ac57b9273c287769f45e0a 293 PRINTS PR00069 Aldo-keto reductase signature 117 135 3.2E-9 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS02435 a0244009a2ac57b9273c287769f45e0a 293 PANTHER PTHR11732 9 287 2.4E-127 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS02435 a0244009a2ac57b9273c287769f45e0a 293 SUPERFAMILY SSF51430 16 284 2.62E-75 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS02435 a0244009a2ac57b9273c287769f45e0a 293 PANTHER PTHR11732:SF275 9 287 2.4E-127 T 14-09-2016 AMK01_RS02435 a0244009a2ac57b9273c287769f45e0a 293 Pfam PF00248 Aldo/keto reductase family 22 284 2.4E-60 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS02435 a0244009a2ac57b9273c287769f45e0a 293 Gene3D G3DSA:3.20.20.100 18 284 4.5E-72 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 SUPERFAMILY SSF56553 54 175 1.12E-44 T 14-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 Gene3D G3DSA:1.10.150.20 246 327 3.4E-37 T 14-09-2016 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 SUPERFAMILY SSF47789 249 325 1.24E-26 T 14-09-2016 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 25 316 1.8E-119 T 14-09-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 SMART SM00662 24 231 1.2E-102 T 14-09-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 3.6E-25 T 14-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 PANTHER PTHR32108 2 329 2.1E-138 T 14-09-2016 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 PANTHER PTHR32108:SF0 2 329 2.1E-138 T 14-09-2016 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 Gene3D G3DSA:2.170.120.12 68 174 1.7E-48 T 14-09-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 225 1.9E-22 T 14-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 6 316 36.418 T 14-09-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 Gene3D G3DSA:3.30.1360.10 10 67 3.2E-9 T 14-09-2016 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 327 4.0E-36 T 14-09-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 SUPERFAMILY SSF55257 6 54 2.04E-30 T 14-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 SUPERFAMILY SSF55257 176 230 2.04E-30 T 14-09-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08570 59abc2539a8fe2fba859f4d1d1bc4394 336 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 250 307 4.7E-25 T 14-09-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 Gene3D G3DSA:3.30.950.10 338 456 4.1E-34 T 14-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 PANTHER PTHR21091:SF16 190 460 5.9E-67 T 14-09-2016 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 PANTHER PTHR21091:SF16 24 42 5.9E-67 T 14-09-2016 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 Gene3D G3DSA:3.40.1010.10 222 337 5.9E-44 T 14-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 SUPERFAMILY SSF53790 216 455 8.9E-74 T 14-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 11 212 1.9E-61 T 14-09-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 Gene3D G3DSA:1.10.8.210 157 216 1.7E-17 T 14-09-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 222 456 8.1E-88 T 14-09-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 Pfam PF10414 Sirohaem synthase dimerisation region 157 214 1.3E-18 T 14-09-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 PANTHER PTHR21091 190 460 5.9E-67 T 14-09-2016 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 227 241 - T 14-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 Gene3D G3DSA:3.40.50.720 9 119 2.5E-25 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 PIRSF PIRSF036426 8 470 9.9E-167 T 14-09-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 SUPERFAMILY SSF75615 121 215 2.62E-23 T 14-09-2016 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 Pfam PF13241 Putative NAD(P)-binding 14 122 1.7E-18 T 14-09-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 224 433 4.2E-49 T 14-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 Gene3D G3DSA:3.30.160.110 120 154 1.4E-13 T 14-09-2016 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 SUPERFAMILY SSF51735 9 119 5.25E-14 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 302 335 - T 14-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS10035 48edcd459d2dfb463801bc1440195e6b 478 PANTHER PTHR21091 24 42 5.9E-67 T 14-09-2016 AMK01_RS04185 b32473e9edda622b60632b7baedf24e2 118 PANTHER PTHR36933:SF1 41 114 4.2E-19 T 14-09-2016 AMK01_RS04185 b32473e9edda622b60632b7baedf24e2 118 Gene3D G3DSA:1.20.1260.10 34 116 5.6E-28 T 14-09-2016 IPR012347 Ferritin-related AMK01_RS04185 b32473e9edda622b60632b7baedf24e2 118 Pfam PF03713 Domain of unknown function (DUF305) 32 113 1.8E-21 T 14-09-2016 IPR005183 Domain of unknown function DUF305 AMK01_RS04185 b32473e9edda622b60632b7baedf24e2 118 PANTHER PTHR36933 41 114 4.2E-19 T 14-09-2016 AMK01_RS09515 8f258af164bb4bf65fc67b88df4abd8f 600 Pfam PF02272 DHHA1 domain 403 467 4.8E-9 T 14-09-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMK01_RS09515 8f258af164bb4bf65fc67b88df4abd8f 600 PANTHER PTHR30255 18 600 1.8E-171 T 14-09-2016 AMK01_RS09515 8f258af164bb4bf65fc67b88df4abd8f 600 PANTHER PTHR30255:SF2 18 600 1.8E-171 T 14-09-2016 AMK01_RS09515 8f258af164bb4bf65fc67b88df4abd8f 600 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 46 594 1.7E-160 T 14-09-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AMK01_RS09515 8f258af164bb4bf65fc67b88df4abd8f 600 SUPERFAMILY SSF64182 75 475 1.11E-109 T 14-09-2016 AMK01_RS09515 8f258af164bb4bf65fc67b88df4abd8f 600 Pfam PF01368 DHH family 101 227 5.2E-11 T 14-09-2016 IPR001667 DDH domain AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 SUPERFAMILY SSF55681 466 697 8.45E-40 T 14-09-2016 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Pfam PF01588 Putative tRNA binding domain 44 145 2.2E-22 T 14-09-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 SMART SM00896 713 806 1.1E-32 T 14-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 SMART SM00873 214 386 7.0E-83 T 14-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 PANTHER PTHR10947 2 596 5.0E-241 T 14-09-2016 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Gene3D G3DSA:3.30.56.20 401 474 6.6E-25 T 14-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 800 41.499 T 14-09-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 SUPERFAMILY SSF54991 710 806 6.67E-24 T 14-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Gene3D G3DSA:3.30.70.380 715 806 2.8E-24 T 14-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 SUPERFAMILY SSF56037 201 396 1.99E-71 T 14-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 SUPERFAMILY SSF50249 38 194 4.28E-44 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 PANTHER PTHR10947:SF0 616 806 5.0E-241 T 14-09-2016 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Gene3D G3DSA:3.30.56.10 155 181 2.6E-25 T 14-09-2016 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Gene3D G3DSA:3.30.56.10 1 38 2.6E-25 T 14-09-2016 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 806 8.0E-214 T 14-09-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Gene3D G3DSA:3.30.930.10 489 698 7.6E-57 T 14-09-2016 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 SUPERFAMILY SSF46955 402 474 5.86E-18 T 14-09-2016 IPR009061 Putative DNA-binding domain AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Pfam PF03147 Ferredoxin-fold anticodon binding domain 713 806 2.2E-21 T 14-09-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Gene3D G3DSA:2.40.50.140 39 154 7.9E-38 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Gene3D G3DSA:3.50.40.10 203 391 2.0E-79 T 14-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 PANTHER PTHR10947:SF0 2 596 5.0E-241 T 14-09-2016 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Pfam PF03484 tRNA synthetase B5 domain 405 469 1.2E-18 T 14-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 SMART SM00874 402 470 3.0E-25 T 14-09-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 Pfam PF03483 B3/4 domain 215 386 5.9E-63 T 14-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK01_RS01500 b3dd6be753357c0f952370dfb664e3ac 807 PANTHER PTHR10947 616 806 5.0E-241 T 14-09-2016 AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 SMART SM00354 1 70 6.2E-17 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 PANTHER PTHR30146 1 340 5.9E-80 T 14-09-2016 AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 SUPERFAMILY SSF53822 61 339 6.28E-50 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 SUPERFAMILY SSF47413 2 57 1.25E-15 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 47 1.6E-12 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 Gene3D G3DSA:3.40.50.2300 177 313 9.3E-34 T 14-09-2016 AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 Pfam PF13377 Periplasmic binding protein-like domain 172 335 7.7E-24 T 14-09-2016 AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 Gene3D G3DSA:1.10.260.40 1 52 3.6E-22 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS03680 4082ae60c9c54c2a222b58905af78f01 342 Gene3D G3DSA:3.40.50.2300 53 176 1.4E-27 T 14-09-2016 AMK01_RS03950 9428895671476cfe12a23598f4118e78 237 Pfam PF00483 Nucleotidyl transferase 5 226 1.1E-35 T 14-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK01_RS03950 9428895671476cfe12a23598f4118e78 237 Gene3D G3DSA:3.90.550.10 1 230 4.3E-57 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS03950 9428895671476cfe12a23598f4118e78 237 SUPERFAMILY SSF53448 2 227 2.71E-60 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS03950 9428895671476cfe12a23598f4118e78 237 PANTHER PTHR22572 4 227 1.2E-59 T 14-09-2016 AMK01_RS04470 36db36cf47c71d7d73de97f9bce6da2b 265 PANTHER PTHR18895 24 246 1.5E-25 T 14-09-2016 AMK01_RS04470 36db36cf47c71d7d73de97f9bce6da2b 265 SUPERFAMILY SSF53335 27 220 7.35E-21 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04470 36db36cf47c71d7d73de97f9bce6da2b 265 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 127 133 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK01_RS04470 36db36cf47c71d7d73de97f9bce6da2b 265 PANTHER PTHR18895:SF75 24 246 1.5E-25 T 14-09-2016 AMK01_RS04470 36db36cf47c71d7d73de97f9bce6da2b 265 Gene3D G3DSA:3.40.50.150 32 248 3.7E-61 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04470 36db36cf47c71d7d73de97f9bce6da2b 265 Pfam PF05175 Methyltransferase small domain 34 180 3.2E-10 T 14-09-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 PANTHER PTHR15184 36 431 5.6E-142 T 14-09-2016 AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 PANTHER PTHR15184:SF9 36 431 5.6E-142 T 14-09-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 SMART SM00382 172 354 5.3E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 361 370 - T 14-09-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 Gene3D G3DSA:3.40.50.300 106 372 1.6E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 32 438 7.3E-124 T 14-09-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 SUPERFAMILY SSF52540 106 374 7.45E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 370 1.9E-69 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS03475 1319a018b54b49285b0deed555e2669d 465 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 36 447 3.5E-185 T 14-09-2016 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 PANTHER PTHR11911 114 412 5.1E-35 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 PANTHER PTHR11911:SF23 67 77 5.1E-35 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 Gene3D G3DSA:3.10.580.10 120 253 4.8E-17 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 SMART SM00116 200 248 2.2E-6 T 14-09-2016 IPR000644 CBS domain AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 SUPERFAMILY SSF161093 275 452 9.02E-49 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 Gene3D G3DSA:1.25.60.10 27 119 2.0E-12 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 SUPERFAMILY SSF54631 126 268 8.12E-25 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 TIGRFAM TIGR00400 mgtE: magnesium transporter 14 452 7.6E-105 T 14-09-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 SMART SM00924 24 127 6.1E-21 T 14-09-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 PANTHER PTHR11911 67 77 5.1E-35 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 Pfam PF03448 MgtE intracellular N domain 26 124 1.8E-17 T 14-09-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 Pfam PF01769 Divalent cation transporter 315 446 1.7E-31 T 14-09-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 SUPERFAMILY SSF158791 17 124 2.09E-16 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 PANTHER PTHR11911:SF23 114 412 5.1E-35 T 14-09-2016 AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 Pfam PF00571 CBS domain 128 184 2.3E-5 T 14-09-2016 IPR000644 CBS domain AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 Pfam PF00571 CBS domain 201 245 1.9E-7 T 14-09-2016 IPR000644 CBS domain AMK01_RS06700 b2d7436bed4ec983e2333fe7336a20b8 457 Gene3D G3DSA:1.10.357.20 275 453 5.4E-60 T 14-09-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 112 128 - T 14-09-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 Gene3D G3DSA:3.40.50.720 44 125 1.5E-17 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 310 54.226 T 14-09-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 PANTHER PTHR32338:SF9 3 308 1.3E-110 T 14-09-2016 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 2 308 3.0E-127 T 14-09-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 PANTHER PTHR32338 3 308 1.3E-110 T 14-09-2016 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 43 105 1.0E-9 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 Gene3D G3DSA:3.30.360.10 126 291 9.3E-33 T 14-09-2016 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 SMART SM00859 4 106 4.9E-17 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 SUPERFAMILY SSF51735 1 136 6.82E-31 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07925 3c6e5209de58c69c7c05da4f0fa34ef3 310 SUPERFAMILY SSF55347 117 291 1.16E-31 T 14-09-2016 AMK01_RS06395 a83bf139fb2eed4e499e52bf246115f7 158 Pfam PF00011 Hsp20/alpha crystallin family 43 137 2.3E-19 T 14-09-2016 IPR002068 Alpha crystallin/Hsp20 domain AMK01_RS06395 a83bf139fb2eed4e499e52bf246115f7 158 SUPERFAMILY SSF49764 11 137 5.58E-22 T 14-09-2016 IPR008978 HSP20-like chaperone AMK01_RS06395 a83bf139fb2eed4e499e52bf246115f7 158 Gene3D G3DSA:2.60.40.790 6 137 5.6E-18 T 14-09-2016 IPR008978 HSP20-like chaperone AMK01_RS06395 a83bf139fb2eed4e499e52bf246115f7 158 PANTHER PTHR11527:SF145 1 145 5.7E-50 T 14-09-2016 AMK01_RS06395 a83bf139fb2eed4e499e52bf246115f7 158 PANTHER PTHR11527 1 145 5.7E-50 T 14-09-2016 IPR031107 Small heat shock protein HSP20 AMK01_RS21160 4f2313f8b225f693e0fdb6f8e106208b 346 Gene3D G3DSA:3.40.50.300 14 131 6.3E-4 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21160 4f2313f8b225f693e0fdb6f8e106208b 346 Pfam PF06144 DNA polymerase III, delta subunit 24 192 3.7E-8 T 14-09-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AMK01_RS21160 4f2313f8b225f693e0fdb6f8e106208b 346 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 22 335 4.3E-46 T 14-09-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AMK01_RS21160 4f2313f8b225f693e0fdb6f8e106208b 346 SUPERFAMILY SSF52540 17 212 6.37E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21160 4f2313f8b225f693e0fdb6f8e106208b 346 Gene3D G3DSA:1.20.272.20 228 308 3.2E-4 T 14-09-2016 AMK01_RS21160 4f2313f8b225f693e0fdb6f8e106208b 346 PANTHER PTHR34388 1 335 1.1E-31 T 14-09-2016 AMK01_RS21160 4f2313f8b225f693e0fdb6f8e106208b 346 Gene3D G3DSA:1.10.8.60 147 227 1.9E-11 T 14-09-2016 AMK01_RS21160 4f2313f8b225f693e0fdb6f8e106208b 346 SUPERFAMILY SSF48019 216 335 4.08E-14 T 14-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 107 179 4.1E-12 T 14-09-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 PANTHER PTHR11573 38 708 6.2E-260 T 14-09-2016 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 574 596 - T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 Pfam PF02867 Ribonucleotide reductase, barrel domain 184 701 8.0E-145 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 Pfam PF08343 Ribonucleotide reductase N-terminal 24 105 1.2E-32 T 14-09-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 Gene3D G3DSA:3.20.70.20 585 701 5.3E-55 T 14-09-2016 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 Gene3D G3DSA:3.20.70.20 145 305 5.3E-55 T 14-09-2016 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 Gene3D G3DSA:3.20.70.20 358 521 5.3E-55 T 14-09-2016 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 SUPERFAMILY SSF51998 183 706 4.88E-186 T 14-09-2016 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 111 704 5.6E-159 T 14-09-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 23 722 0.0 T 14-09-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 259 278 6.6E-32 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 434 457 6.6E-32 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 495 6.6E-32 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 501 524 6.6E-32 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 390 401 6.6E-32 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 585 612 6.6E-32 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS19195 f924734c7958ee6784a1b6eca739d82a 722 SUPERFAMILY SSF48168 22 182 9.02E-61 T 14-09-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK01_RS10080 00d2e4e06f1162285f4257c2f366e010 380 Pfam PF00024 PAN domain 313 362 1.4E-4 T 14-09-2016 IPR003609 PAN/Apple domain AMK01_RS10080 00d2e4e06f1162285f4257c2f366e010 380 Gene3D G3DSA:3.90.226.10 59 181 6.8E-9 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS10080 00d2e4e06f1162285f4257c2f366e010 380 SMART SM00223 231 296 9.6E-4 T 14-09-2016 IPR000177 Apple domain GO:0005515|GO:0005576|GO:0006508 Reactome: REACT_604 AMK01_RS10080 00d2e4e06f1162285f4257c2f366e010 380 SUPERFAMILY SSF52096 29 181 7.75E-16 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS10080 00d2e4e06f1162285f4257c2f366e010 380 SUPERFAMILY SSF57414 234 294 1.26E-5 T 14-09-2016 AMK01_RS10080 00d2e4e06f1162285f4257c2f366e010 380 Pfam PF14295 PAN domain 232 277 6.7E-8 T 14-09-2016 IPR003609 PAN/Apple domain AMK01_RS10080 00d2e4e06f1162285f4257c2f366e010 380 Gene3D G3DSA:3.50.4.10 316 367 9.8E-5 T 14-09-2016 AMK01_RS10080 00d2e4e06f1162285f4257c2f366e010 380 Gene3D G3DSA:3.50.4.10 223 294 1.6E-11 T 14-09-2016 AMK01_RS00550 a1d16951286bde42b84f5c5f92df321b 286 Pfam PF15931 Domain of unknown function (DUF4747) 13 261 1.5E-48 T 14-09-2016 IPR031832 Protein of unknown function DUF4747 AMK01_RS05410 5693ab4832a708ae8a4fff977cf6f080 208 SUPERFAMILY SSF53335 4 193 5.3E-23 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05410 5693ab4832a708ae8a4fff977cf6f080 208 Pfam PF13489 Methyltransferase domain 27 184 4.3E-8 T 14-09-2016 AMK01_RS05410 5693ab4832a708ae8a4fff977cf6f080 208 Gene3D G3DSA:3.40.50.150 40 195 6.6E-18 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS08330 988befcfa4cfc7461b6339765d1738cc 257 Hamap MF_00361 NAD kinase [nadK]. 6 256 19.441 T 14-09-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK01_RS08330 988befcfa4cfc7461b6339765d1738cc 257 Gene3D G3DSA:3.40.50.10330 31 111 9.8E-18 T 14-09-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK01_RS08330 988befcfa4cfc7461b6339765d1738cc 257 Pfam PF01513 ATP-NAD kinase 34 204 3.0E-14 T 14-09-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK01_RS08330 988befcfa4cfc7461b6339765d1738cc 257 PANTHER PTHR20275 11 255 4.5E-83 T 14-09-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK01_RS08330 988befcfa4cfc7461b6339765d1738cc 257 PANTHER PTHR20275:SF7 11 255 4.5E-83 T 14-09-2016 AMK01_RS08330 988befcfa4cfc7461b6339765d1738cc 257 SUPERFAMILY SSF111331 27 242 6.67E-54 T 14-09-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMK01_RS08330 988befcfa4cfc7461b6339765d1738cc 257 Gene3D G3DSA:2.60.200.30 112 225 5.2E-29 T 14-09-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK01_RS13145 ae14d9047961bbbb155675272786c613 151 Pfam PF05656 Protein of unknown function (DUF805) 54 141 2.2E-20 T 14-09-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 AMK01_RS13145 ae14d9047961bbbb155675272786c613 151 PANTHER PTHR34980 53 125 3.9E-13 T 14-09-2016 AMK01_RS13145 ae14d9047961bbbb155675272786c613 151 PANTHER PTHR34980:SF2 53 125 3.9E-13 T 14-09-2016 AMK01_RS09710 473df96f20ee4db4c35d360dfb541932 186 SUPERFAMILY SSF55194 5 186 2.62E-68 T 14-09-2016 IPR023584 Ribosome recycling factor domain AMK01_RS09710 473df96f20ee4db4c35d360dfb541932 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 5.8E-63 T 14-09-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK01_RS09710 473df96f20ee4db4c35d360dfb541932 186 Pfam PF01765 Ribosome recycling factor 21 184 2.9E-58 T 14-09-2016 IPR023584 Ribosome recycling factor domain AMK01_RS09710 473df96f20ee4db4c35d360dfb541932 186 PANTHER PTHR20982 5 186 1.1E-73 T 14-09-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK01_RS09710 473df96f20ee4db4c35d360dfb541932 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 25.684 T 14-09-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK01_RS09710 473df96f20ee4db4c35d360dfb541932 186 Gene3D G3DSA:1.10.132.20 68 186 7.0E-41 T 14-09-2016 IPR023584 Ribosome recycling factor domain AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Gene3D G3DSA:3.40.50.300 3 249 3.5E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PANTHER PTHR23115 2 154 1.6E-86 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Pfam PF00679 Elongation factor G C-terminus 541 623 3.2E-10 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 SUPERFAMILY SSF50447 233 336 3.77E-10 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 SUPERFAMILY SSF54211 444 538 2.96E-15 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PANTHER PTHR23115:SF91 222 440 1.6E-86 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Pfam PF14492 Elongation Factor G, domain II 348 420 1.0E-9 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PANTHER PTHR23115 222 440 1.6E-86 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PANTHER PTHR23115 457 566 1.6E-86 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Gene3D G3DSA:2.40.30.10 255 336 6.0E-8 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PANTHER PTHR23115:SF91 171 184 1.6E-86 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Pfam PF03764 Elongation factor G, domain IV 445 539 1.9E-15 T 14-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PANTHER PTHR23115 171 184 1.6E-86 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 151 7.5E-27 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 SUPERFAMILY SSF54980 349 425 8.63E-13 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Gene3D G3DSA:3.30.230.10 445 540 3.1E-24 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Gene3D G3DSA:3.30.70.240 541 622 2.4E-10 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 SUPERFAMILY SSF54980 541 625 6.23E-10 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 SUPERFAMILY SSF52540 3 248 6.27E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Gene3D G3DSA:3.30.70.870 350 421 1.1E-11 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PANTHER PTHR23115:SF91 2 154 1.6E-86 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PANTHER PTHR23115:SF91 457 566 1.6E-86 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 Pfam PF00009 Elongation factor Tu GTP binding domain 2 248 1.4E-52 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR00315 GTP-binding elongation factor signature 87 98 5.3E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR00315 GTP-binding elongation factor signature 71 81 5.3E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR00315 GTP-binding elongation factor signature 123 132 5.3E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR00315 GTP-binding elongation factor signature 5 18 5.3E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR00315 GTP-binding elongation factor signature 51 59 5.3E-14 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 SMART SM00889 424 539 6.0E-7 T 14-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 462 476 3.8E-27 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 477 499 3.8E-27 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 222 244 3.8E-27 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 511 528 3.8E-27 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 3.8E-27 T 14-09-2016 AMK01_RS14165 299838392aeac7f3eca4525c973ab822 648 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 276 302 3.8E-27 T 14-09-2016 AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 PANTHER PTHR23416:SF8 4 256 1.3E-105 T 14-09-2016 AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 Gene3D G3DSA:1.20.1180.10 199 261 1.9E-16 T 14-09-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 10 263 4.8E-103 T 14-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 182 261 8.7E-20 T 14-09-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 PANTHER PTHR23416 4 256 1.3E-105 T 14-09-2016 AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 PIRSF PIRSF000456 6 272 1.9E-100 T 14-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 Gene3D G3DSA:2.160.10.10 5 193 4.9E-45 T 14-09-2016 AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 SUPERFAMILY SSF51161 5 258 8.25E-68 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 145 3.8E-6 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 54 8.9E-8 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS09745 8fdde6b9975aa185a17e9ffbecee29b2 272 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 7 265 43.031 T 14-09-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK01_RS04305 8b02d625542f8c88c21d651adc69e1e8 82 Pfam PF13773 Domain of unknown function (DUF4170) 8 75 2.3E-39 T 14-09-2016 IPR025226 Protein of unknown function DUF4170 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 161 2.0E-12 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 Pfam PF08281 Sigma-70, region 4 112 158 2.8E-6 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 PANTHER PTHR30173 2 378 2.7E-183 T 14-09-2016 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 SUPERFAMILY SSF48452 314 395 1.02E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 SUPERFAMILY SSF48452 17 48 1.02E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 SUPERFAMILY SSF88946 3 90 1.22E-12 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 PANTHER PTHR30173:SF7 2 378 2.7E-183 T 14-09-2016 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 Pfam PF04542 Sigma-70 region 2 8 75 3.8E-9 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 SUPERFAMILY SSF88659 100 162 1.35E-10 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 Gene3D G3DSA:1.10.10.10 101 162 7.5E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 Gene3D G3DSA:1.25.40.10 358 399 1.3E-6 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06750 49daf7761e1651dff88fec94580fab48 413 Gene3D G3DSA:1.10.1740.10 3 75 1.7E-11 T 14-09-2016 AMK01_RS02685 f4f552fe5f71d244e4b7d565b609a602 378 PANTHER PTHR23028 8 370 1.1E-30 T 14-09-2016 AMK01_RS02685 f4f552fe5f71d244e4b7d565b609a602 378 Pfam PF01757 Acyltransferase family 12 352 1.4E-26 T 14-09-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PANTHER PTHR32063:SF20 628 1078 0.0 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PANTHER PTHR32063:SF20 1 604 0.0 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 SUPERFAMILY SSF82693 40 133 2.88E-21 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 SUPERFAMILY SSF82866 810 1033 3.14E-47 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 SUPERFAMILY SSF82866 289 489 4.97E-44 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Pfam PF00873 AcrB/AcrD/AcrF family 4 1032 4.8E-225 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Gene3D G3DSA:3.30.2090.10 724 812 5.5E-12 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Gene3D G3DSA:3.30.2090.10 182 265 1.9E-10 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PANTHER PTHR32063 1 604 0.0 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Gene3D G3DSA:3.30.70.1430 40 139 3.3E-23 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 SUPERFAMILY SSF82693 552 620 7.32E-8 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 SUPERFAMILY SSF82714 724 812 8.76E-13 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 SUPERFAMILY SSF82714 182 265 8.24E-11 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Gene3D G3DSA:1.20.1640.10 300 492 5.7E-52 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PANTHER PTHR32063 628 1078 0.0 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Gene3D G3DSA:3.30.70.1430 557 621 1.4E-5 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.3E-54 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.3E-54 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 1.3E-54 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.3E-54 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 1.3E-54 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 1.3E-54 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-54 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-54 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 SUPERFAMILY SSF82693 267 316 1.67E-12 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 SUPERFAMILY SSF82693 138 181 1.67E-12 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Gene3D G3DSA:1.10.3850.10 818 1033 9.1E-52 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Gene3D G3DSA:3.30.70.1320 269 299 2.4E-9 T 14-09-2016 AMK01_RS16960 cbafffacb6354e10abcb0983f25d7ff4 1109 Gene3D G3DSA:3.30.70.1320 140 178 2.4E-9 T 14-09-2016 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 PANTHER PTHR10459 52 519 9.4E-80 T 14-09-2016 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 SUPERFAMILY SSF56091 43 240 5.04E-43 T 14-09-2016 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 Pfam PF01068 ATP dependent DNA ligase domain 70 239 3.2E-25 T 14-09-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 374 619 2.2E-91 T 14-09-2016 IPR014145 DNA ligase D, polymerase domain AMK01_RS03275 17ea01d296657507335e9c2962276786 659 Gene3D G3DSA:3.30.470.30 81 189 3.1E-27 T 14-09-2016 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 PANTHER PTHR10459:SF70 52 519 9.4E-80 T 14-09-2016 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 SUPERFAMILY SSF50249 243 362 4.74E-23 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS03275 17ea01d296657507335e9c2962276786 659 Pfam PF04679 ATP dependent DNA ligase C terminal region 259 352 1.6E-22 T 14-09-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 Gene3D G3DSA:3.30.1490.70 197 240 4.3E-19 T 14-09-2016 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 Gene3D G3DSA:3.30.1490.70 52 80 4.3E-19 T 14-09-2016 AMK01_RS03275 17ea01d296657507335e9c2962276786 659 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 58 358 4.5E-106 T 14-09-2016 IPR014146 DNA ligase D, ligase domain AMK01_RS03275 17ea01d296657507335e9c2962276786 659 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 67 648 1.6E-199 T 14-09-2016 IPR014143 DNA ligase D AMK01_RS03275 17ea01d296657507335e9c2962276786 659 Gene3D G3DSA:2.40.50.140 242 360 1.2E-39 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 SUPERFAMILY SSF46689 18 69 4.21E-7 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 SMART SM00342 35 118 2.1E-13 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 Gene3D G3DSA:1.10.10.10 206 288 4.2E-31 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 Gene3D G3DSA:1.10.10.60 14 73 1.1E-13 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 Gene3D G3DSA:1.10.10.60 74 116 2.9E-5 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 207 285 7.3E-32 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 SUPERFAMILY SSF53155 124 198 3.92E-17 T 14-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 PANTHER PTHR10815 95 286 6.1E-59 T 14-09-2016 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 Gene3D G3DSA:3.30.160.70 117 198 3.7E-25 T 14-09-2016 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 208 287 1.4E-28 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 SUPERFAMILY SSF46689 73 121 4.39E-5 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 SUPERFAMILY SSF46767 206 287 7.32E-30 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 Pfam PF12833 Helix-turn-helix domain 41 119 2.2E-16 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS18970 651664437f9cb0e38707e005930bd74f 290 PANTHER PTHR10815:SF5 95 286 6.1E-59 T 14-09-2016 AMK01_RS07650 68f3e0226b23ceaf80e0df5c747ef305 293 PANTHER PTHR22911 5 292 9.5E-18 T 14-09-2016 AMK01_RS07650 68f3e0226b23ceaf80e0df5c747ef305 293 SUPERFAMILY SSF103481 50 146 4.58E-11 T 14-09-2016 AMK01_RS07650 68f3e0226b23ceaf80e0df5c747ef305 293 Pfam PF00892 EamA-like transporter family 34 143 1.8E-7 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS07650 68f3e0226b23ceaf80e0df5c747ef305 293 SUPERFAMILY SSF103481 185 281 1.31E-5 T 14-09-2016 AMK01_RS09930 92e4275acfe1b3f886c6d30a6e777076 255 SUPERFAMILY SSF52540 15 248 1.14E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09930 92e4275acfe1b3f886c6d30a6e777076 255 Pfam PF00005 ABC transporter 30 178 1.6E-37 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS09930 92e4275acfe1b3f886c6d30a6e777076 255 SMART SM00382 39 226 3.7E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS09930 92e4275acfe1b3f886c6d30a6e777076 255 Gene3D G3DSA:3.40.50.300 14 249 5.1E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09930 92e4275acfe1b3f886c6d30a6e777076 255 PANTHER PTHR24220 16 255 4.0E-173 T 14-09-2016 AMK01_RS09930 92e4275acfe1b3f886c6d30a6e777076 255 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS09930 92e4275acfe1b3f886c6d30a6e777076 255 PIRSF PIRSF039085 11 254 4.2E-107 T 14-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK01_RS09930 92e4275acfe1b3f886c6d30a6e777076 255 PANTHER PTHR24220:SF490 16 255 4.0E-173 T 14-09-2016 AMK01_RS06520 001e3317987aff312ac08291caf015c8 296 SUPERFAMILY SSF46785 4 109 2.31E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06520 001e3317987aff312ac08291caf015c8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.9E-15 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS06520 001e3317987aff312ac08291caf015c8 296 PANTHER PTHR30537:SF24 1 292 1.0E-105 T 14-09-2016 AMK01_RS06520 001e3317987aff312ac08291caf015c8 296 Gene3D G3DSA:3.40.190.10 92 190 5.2E-21 T 14-09-2016 AMK01_RS06520 001e3317987aff312ac08291caf015c8 296 SUPERFAMILY SSF53850 90 293 1.77E-40 T 14-09-2016 AMK01_RS06520 001e3317987aff312ac08291caf015c8 296 Pfam PF03466 LysR substrate binding domain 89 290 2.1E-39 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS06520 001e3317987aff312ac08291caf015c8 296 PANTHER PTHR30537 1 292 1.0E-105 T 14-09-2016 AMK01_RS06520 001e3317987aff312ac08291caf015c8 296 Gene3D G3DSA:1.10.10.10 3 84 5.3E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS25480 86fa1fc8950759c78c01a9e3a59e4714 187 Gene3D G3DSA:1.10.3810.10 70 185 3.5E-45 T 14-09-2016 AMK01_RS25480 86fa1fc8950759c78c01a9e3a59e4714 187 SUPERFAMILY SSF53955 59 187 3.09E-45 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS25480 86fa1fc8950759c78c01a9e3a59e4714 187 Pfam PF00912 Transglycosylase 71 186 4.5E-42 T 14-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK01_RS25480 86fa1fc8950759c78c01a9e3a59e4714 187 PANTHER PTHR32282 17 185 9.5E-60 T 14-09-2016 AMK01_RS25480 86fa1fc8950759c78c01a9e3a59e4714 187 PANTHER PTHR32282:SF5 17 185 9.5E-60 T 14-09-2016 AMK01_RS19620 47283dd666cc3d1c7fa97936f47f1484 98 SUPERFAMILY SSF143800 1 84 3.14E-29 T 14-09-2016 AMK01_RS19620 47283dd666cc3d1c7fa97936f47f1484 98 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 20.021 T 14-09-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS19620 47283dd666cc3d1c7fa97936f47f1484 98 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.6E-24 T 14-09-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS19620 47283dd666cc3d1c7fa97936f47f1484 98 Gene3D G3DSA:2.30.170.40 2 77 4.3E-31 T 14-09-2016 AMK01_RS19620 47283dd666cc3d1c7fa97936f47f1484 98 PANTHER PTHR13528 1 95 1.4E-30 T 14-09-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 AMK01_RS19620 47283dd666cc3d1c7fa97936f47f1484 98 Pfam PF00830 Ribosomal L28 family 3 61 5.5E-24 T 14-09-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 AMK01_RS13230 bfaf037895335110229b911752059de3 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 444 6.4E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS13230 bfaf037895335110229b911752059de3 448 SMART SM00304 189 242 0.0026 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS13230 bfaf037895335110229b911752059de3 448 PANTHER PTHR24423 183 447 5.2E-54 T 14-09-2016 AMK01_RS13230 bfaf037895335110229b911752059de3 448 Gene3D G3DSA:3.30.565.10 306 447 2.4E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS13230 bfaf037895335110229b911752059de3 448 Gene3D G3DSA:1.10.287.130 234 297 1.1E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS13230 bfaf037895335110229b911752059de3 448 SUPERFAMILY SSF47384 226 299 8.24E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS13230 bfaf037895335110229b911752059de3 448 SMART SM00388 243 301 9.6E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS13230 bfaf037895335110229b911752059de3 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 1.4E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS13230 bfaf037895335110229b911752059de3 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 1.4E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS13230 bfaf037895335110229b911752059de3 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.4E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS13230 bfaf037895335110229b911752059de3 448 PANTHER PTHR24423:SF399 183 447 5.2E-54 T 14-09-2016 AMK01_RS13230 bfaf037895335110229b911752059de3 448 SMART SM00387 345 447 1.9E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS13230 bfaf037895335110229b911752059de3 448 SUPERFAMILY SSF55874 291 445 1.7E-31 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 162 6.7E-32 T 14-09-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 252 286 - T 14-09-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 PANTHER PTHR10192 1 405 9.2E-128 T 14-09-2016 AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 SUPERFAMILY SSF53218 176 321 1.23E-39 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 Pfam PF00994 Probable molybdopterin binding domain 178 316 2.1E-25 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 Gene3D G3DSA:2.40.340.10 331 399 2.1E-13 T 14-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 Pfam PF03454 MoeA C-terminal region (domain IV) 331 401 3.9E-15 T 14-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 SUPERFAMILY SSF63867 330 404 1.31E-16 T 14-09-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 Gene3D G3DSA:2.170.190.11 47 129 2.0E-28 T 14-09-2016 AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 311 3.9E-26 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 Gene3D G3DSA:3.40.980.10 161 329 2.5E-53 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 SMART SM00852 178 317 4.6E-41 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 Gene3D G3DSA:3.90.105.10 130 160 1.3E-10 T 14-09-2016 AMK01_RS11155 fbf088ac581c97a432e2e88b4f359f1d 407 SUPERFAMILY SSF63882 3 173 1.57E-48 T 14-09-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS13140 81afec3e6e1982575190448c79d3a7b9 256 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 72 226 2.4E-23 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13140 81afec3e6e1982575190448c79d3a7b9 256 SMART SM00044 45 246 7.9E-6 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13140 81afec3e6e1982575190448c79d3a7b9 256 PANTHER PTHR11920:SF257 74 223 7.9E-33 T 14-09-2016 AMK01_RS13140 81afec3e6e1982575190448c79d3a7b9 256 SUPERFAMILY SSF55073 69 251 4.24E-46 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS13140 81afec3e6e1982575190448c79d3a7b9 256 PANTHER PTHR11920 74 223 7.9E-33 T 14-09-2016 AMK01_RS13140 81afec3e6e1982575190448c79d3a7b9 256 Gene3D G3DSA:3.30.70.1230 74 248 2.2E-33 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 Hamap MF_01977 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 399 62.855 T 14-09-2016 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PANTHER PTHR13697:SF30 1 208 1.9E-154 T 14-09-2016 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PIRSF PIRSF036484 1 403 1.7E-237 T 14-09-2016 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042|UniPathway: UPA00109 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 Pfam PF00365 Phosphofructokinase 5 293 4.3E-35 T 14-09-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PANTHER PTHR13697:SF30 228 398 1.9E-154 T 14-09-2016 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PANTHER PTHR13697 1 208 1.9E-154 T 14-09-2016 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 Gene3D G3DSA:3.40.50.450 3 260 8.1E-53 T 14-09-2016 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 184 200 2.5E-14 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 112 128 2.5E-14 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 2.5E-14 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 145 162 2.5E-14 T 14-09-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 PANTHER PTHR13697 228 398 1.9E-154 T 14-09-2016 AMK01_RS14695 9ff2fa873564b9591e89bd899ed6e422 403 SUPERFAMILY SSF53784 4 400 2.09E-76 T 14-09-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.1E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.1E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.1E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.0E-34 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 PANTHER PTHR33175 1 91 9.8E-41 T 14-09-2016 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 Gene3D G3DSA:4.10.520.10 1 91 4.2E-36 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 SMART SM00411 1 90 7.9E-44 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 SUPERFAMILY SSF47729 1 90 6.48E-32 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK01_RS08035 b363135d498d734c5eeef68d508ef268 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMK01_RS17210 085059223ae539a35db697d3aaad5abb 594 PANTHER PTHR21000 11 593 1.1E-289 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS17210 085059223ae539a35db697d3aaad5abb 594 Pfam PF00920 Dehydratase family 47 574 1.8E-151 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS17210 085059223ae539a35db697d3aaad5abb 594 PANTHER PTHR21000:SF1 11 593 1.1E-289 T 14-09-2016 AMK01_RS17210 085059223ae539a35db697d3aaad5abb 594 SUPERFAMILY SSF52016 384 577 2.43E-47 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK01_RS17210 085059223ae539a35db697d3aaad5abb 594 SUPERFAMILY SSF143975 6 381 1.14E-114 T 14-09-2016 AMK01_RS01325 1e6de584a26f01fcc95e8993cfdaab9e 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 4.0E-126 T 14-09-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 AMK01_RS01325 1e6de584a26f01fcc95e8993cfdaab9e 257 PANTHER PTHR22572 2 256 8.9E-144 T 14-09-2016 AMK01_RS01325 1e6de584a26f01fcc95e8993cfdaab9e 257 Pfam PF00483 Nucleotidyl transferase 2 201 1.5E-12 T 14-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK01_RS01325 1e6de584a26f01fcc95e8993cfdaab9e 257 PANTHER PTHR22572:SF16 2 256 8.9E-144 T 14-09-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 AMK01_RS01325 1e6de584a26f01fcc95e8993cfdaab9e 257 SUPERFAMILY SSF53448 1 256 6.07E-63 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS01325 1e6de584a26f01fcc95e8993cfdaab9e 257 Gene3D G3DSA:3.90.550.10 1 256 1.4E-58 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 PANTHER PTHR11059 2 554 3.6E-141 T 14-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 Gene3D G3DSA:3.40.50.300 430 507 3.6E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 502 3.6E-14 T 14-09-2016 IPR003395 RecF/RecN/SMC, N-terminal AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 Gene3D G3DSA:3.40.50.300 1 206 1.9E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 PIRSF PIRSF003128 1 556 6.5E-155 T 14-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 SUPERFAMILY SSF52540 2 50 1.83E-27 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 SUPERFAMILY SSF52540 288 507 1.83E-27 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 SUPERFAMILY SSF52540 1 217 4.61E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14565 2465d7553c29854e5114e18dcb71cc6b 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 9.8E-142 T 14-09-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK01_RS18265 d29e887e17f21d3f27241e493b8b0d19 139 Pfam PF14552 Tautomerase enzyme 38 119 1.9E-32 T 14-09-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AMK01_RS18265 d29e887e17f21d3f27241e493b8b0d19 139 PANTHER PTHR38460:SF1 2 133 1.6E-35 T 14-09-2016 AMK01_RS18265 d29e887e17f21d3f27241e493b8b0d19 139 SUPERFAMILY SSF55331 2 127 5.5E-41 T 14-09-2016 IPR014347 Tautomerase/MIF superfamily AMK01_RS18265 d29e887e17f21d3f27241e493b8b0d19 139 Gene3D G3DSA:3.30.429.10 3 129 4.1E-43 T 14-09-2016 AMK01_RS18265 d29e887e17f21d3f27241e493b8b0d19 139 PANTHER PTHR38460 2 133 1.6E-35 T 14-09-2016 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 PANTHER PTHR11920 698 716 1.5E-57 T 14-09-2016 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 463 641 1.0E-31 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 SUPERFAMILY SSF55073 458 648 5.02E-53 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 PANTHER PTHR11920 426 651 1.5E-57 T 14-09-2016 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 Gene3D G3DSA:3.30.70.1230 463 647 1.1E-43 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 PANTHER PTHR11920:SF341 426 651 1.5E-57 T 14-09-2016 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 PANTHER PTHR11920:SF341 698 716 1.5E-57 T 14-09-2016 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 SMART SM01080 30 364 3.8E-76 T 14-09-2016 IPR007890 CHASE2 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 SMART SM00044 424 629 3.2E-18 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18600 f94476abcc402f0ce020c62ecf6f251f 723 Pfam PF05226 CHASE2 domain 16 362 6.0E-50 T 14-09-2016 IPR007890 CHASE2 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 Gene3D G3DSA:3.30.930.10 136 282 3.3E-96 T 14-09-2016 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 Gene3D G3DSA:3.30.930.10 420 588 3.3E-96 T 14-09-2016 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 588 3.7E-180 T 14-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 Pfam PF01336 OB-fold nucleic acid binding domain 21 104 2.4E-17 T 14-09-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 SUPERFAMILY SSF55261 295 425 1.8E-31 T 14-09-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 569 32.357 T 14-09-2016 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 SUPERFAMILY SSF50249 4 107 1.68E-31 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 PANTHER PTHR22594:SF5 2 303 3.3E-197 T 14-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 PANTHER PTHR22594:SF5 375 577 3.3E-197 T 14-09-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 Gene3D G3DSA:2.40.50.140 4 109 8.1E-38 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 SUPERFAMILY SSF55681 430 589 1.83E-92 T 14-09-2016 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 SUPERFAMILY SSF55681 115 298 1.83E-92 T 14-09-2016 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 3.1E-21 T 14-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 480 496 3.1E-21 T 14-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 3.1E-21 T 14-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 524 538 3.1E-21 T 14-09-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 Gene3D G3DSA:3.30.1360.30 283 419 2.0E-46 T 14-09-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 PANTHER PTHR22594 2 303 3.3E-197 T 14-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 PANTHER PTHR22594 375 577 3.3E-197 T 14-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 563 1.2E-89 T 14-09-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS07625 7d2cfb2892b3e5081c95ac837d75604e 596 Pfam PF02938 GAD domain 314 407 2.4E-8 T 14-09-2016 IPR029351 GAD domain AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 5.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 5.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 5.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 SUPERFAMILY SSF46785 12 92 3.26E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 Gene3D G3DSA:3.40.190.10 183 277 4.8E-16 T 14-09-2016 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 Gene3D G3DSA:3.40.190.10 282 308 2.0E-22 T 14-09-2016 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 Gene3D G3DSA:3.40.190.10 99 182 2.0E-22 T 14-09-2016 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 PANTHER PTHR30118:SF8 4 306 9.8E-73 T 14-09-2016 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 Gene3D G3DSA:1.10.10.10 11 93 1.4E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 Pfam PF03466 LysR substrate binding domain 104 305 3.9E-20 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 75 1.6E-14 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 PANTHER PTHR30118 4 306 9.8E-73 T 14-09-2016 AMK01_RS07240 12421eb4c22f317cfd689b3dd11f4762 311 SUPERFAMILY SSF53850 99 305 1.57E-31 T 14-09-2016 AMK01_RS04945 f2725ab82214d6e6175a6d7691501286 290 PANTHER PTHR30477 8 289 7.3E-67 T 14-09-2016 AMK01_RS04945 f2725ab82214d6e6175a6d7691501286 290 SUPERFAMILY SSF81345 14 270 5.23E-23 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AMK01_RS04945 f2725ab82214d6e6175a6d7691501286 290 Pfam PF00950 ABC 3 transport family 14 273 3.4E-55 T 14-09-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK01_RS04945 f2725ab82214d6e6175a6d7691501286 290 PANTHER PTHR30477:SF3 8 289 7.3E-67 T 14-09-2016 AMK01_RS10510 b0200733219e9772d517d453512126c8 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 274 6.0E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10510 b0200733219e9772d517d453512126c8 282 PANTHER PTHR32243:SF32 5 282 3.7E-132 T 14-09-2016 AMK01_RS10510 b0200733219e9772d517d453512126c8 282 SUPERFAMILY SSF161098 13 281 4.77E-68 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10510 b0200733219e9772d517d453512126c8 282 Gene3D G3DSA:1.10.3720.10 11 269 2.9E-61 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10510 b0200733219e9772d517d453512126c8 282 PANTHER PTHR32243 5 282 3.7E-132 T 14-09-2016 AMK01_RS02080 8c76a4b0e0b0ff2b0f261fa1970f7e21 265 PANTHER PTHR10434 2 186 1.1E-25 T 14-09-2016 AMK01_RS02080 8c76a4b0e0b0ff2b0f261fa1970f7e21 265 SUPERFAMILY SSF69593 5 257 6.54E-28 T 14-09-2016 AMK01_RS02080 8c76a4b0e0b0ff2b0f261fa1970f7e21 265 Gene3D G3DSA:3.40.1130.10 60 161 2.8E-9 T 14-09-2016 AMK01_RS02080 8c76a4b0e0b0ff2b0f261fa1970f7e21 265 Pfam PF01553 Acyltransferase 55 182 4.7E-20 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK01_RS02080 8c76a4b0e0b0ff2b0f261fa1970f7e21 265 SMART SM00563 67 186 1.7E-28 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK01_RS05645 ccfae5dc7178a76518dc556fc035dbf7 186 PANTHER PTHR23416 52 185 4.6E-35 T 14-09-2016 AMK01_RS05645 ccfae5dc7178a76518dc556fc035dbf7 186 SUPERFAMILY SSF51161 52 185 1.18E-36 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS05645 ccfae5dc7178a76518dc556fc035dbf7 186 Gene3D G3DSA:2.160.10.10 19 185 4.5E-42 T 14-09-2016 AMK01_RS05645 ccfae5dc7178a76518dc556fc035dbf7 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 165 1.5E-9 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS05645 ccfae5dc7178a76518dc556fc035dbf7 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 Gene3D G3DSA:3.40.50.720 3 198 3.2E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 SUPERFAMILY SSF51735 3 342 4.65E-80 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 346 56.827 T 14-09-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 PANTHER PTHR10366 4 282 1.7E-208 T 14-09-2016 AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 PANTHER PTHR10366 300 347 1.7E-208 T 14-09-2016 AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 336 1.4E-158 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 343 1.8E-186 T 14-09-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 Gene3D G3DSA:3.90.25.10 199 247 7.1E-50 T 14-09-2016 AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 Gene3D G3DSA:3.90.25.10 294 347 7.1E-50 T 14-09-2016 AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 PANTHER PTHR10366:SF32 4 282 1.7E-208 T 14-09-2016 AMK01_RS04025 5d654c1fb2630e15a129bd6143515ff0 353 PANTHER PTHR10366:SF32 300 347 1.7E-208 T 14-09-2016 AMK01_RS02950 5a0c0a0f9ec5563ce896e0cec1173d6c 227 SUPERFAMILY SSF48150 38 181 3.14E-29 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS02950 5a0c0a0f9ec5563ce896e0cec1173d6c 227 Gene3D G3DSA:1.10.340.30 39 137 3.7E-18 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS02950 5a0c0a0f9ec5563ce896e0cec1173d6c 227 PANTHER PTHR30037:SF3 175 208 9.2E-72 T 14-09-2016 AMK01_RS02950 5a0c0a0f9ec5563ce896e0cec1173d6c 227 PANTHER PTHR30037:SF3 1 157 9.2E-72 T 14-09-2016 AMK01_RS02950 5a0c0a0f9ec5563ce896e0cec1173d6c 227 PANTHER PTHR30037 175 208 9.2E-72 T 14-09-2016 AMK01_RS02950 5a0c0a0f9ec5563ce896e0cec1173d6c 227 PANTHER PTHR30037 1 157 9.2E-72 T 14-09-2016 AMK01_RS02950 5a0c0a0f9ec5563ce896e0cec1173d6c 227 Pfam PF03352 Methyladenine glycosylase 43 133 1.1E-10 T 14-09-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 PANTHER PTHR24220:SF416 31 401 6.6E-133 T 14-09-2016 AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 Gene3D G3DSA:3.40.50.300 291 508 7.1E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 PANTHER PTHR24220 31 401 6.6E-133 T 14-09-2016 AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 Gene3D G3DSA:3.40.50.300 27 245 2.7E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 SMART SM00382 301 494 0.46 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 SMART SM00382 54 242 1.0E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 ProSitePatterns PS00211 ABC transporters family signature. 419 433 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 SUPERFAMILY SSF52540 28 245 4.61E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 Pfam PF00005 ABC transporter 293 446 1.9E-15 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 Pfam PF00005 ABC transporter 45 194 2.0E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS02640 6eacc1768a5d2f23ac54348540d3ca01 517 SUPERFAMILY SSF52540 262 504 2.09E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS24695 fcb58d3a4a910f0a4219feef8f1793aa 94 Gene3D G3DSA:3.30.420.10 2 87 2.8E-30 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS24695 fcb58d3a4a910f0a4219feef8f1793aa 94 PANTHER PTHR30231:SF0 3 94 1.9E-34 T 14-09-2016 AMK01_RS24695 fcb58d3a4a910f0a4219feef8f1793aa 94 PANTHER PTHR30231 3 94 1.9E-34 T 14-09-2016 AMK01_RS24695 fcb58d3a4a910f0a4219feef8f1793aa 94 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 87 5.7E-24 T 14-09-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS24695 fcb58d3a4a910f0a4219feef8f1793aa 94 SUPERFAMILY SSF53098 2 86 3.72E-26 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS24695 fcb58d3a4a910f0a4219feef8f1793aa 94 Pfam PF00929 Exonuclease 2 79 5.7E-13 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK01_RS03800 9140cfbb0b5df9edef0c9e7b3dfb9597 630 Pfam PF13502 AsmA-like C-terminal region 409 591 5.9E-15 T 14-09-2016 IPR032712 AsmA-like, C-terminal AMK01_RS03800 9140cfbb0b5df9edef0c9e7b3dfb9597 630 PANTHER PTHR30441 10 283 8.6E-21 T 14-09-2016 AMK01_RS03800 9140cfbb0b5df9edef0c9e7b3dfb9597 630 Pfam PF05170 AsmA family 25 200 1.5E-9 T 14-09-2016 IPR007844 AsmA AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 SMART SM00278 621 640 120.0 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 SMART SM00278 653 672 0.32 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 Pfam PF01541 GIY-YIG catalytic domain 68 140 7.5E-9 T 14-09-2016 IPR000305 GIY-YIG nuclease superfamily AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 PANTHER PTHR30562 23 506 4.1E-252 T 14-09-2016 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 PANTHER PTHR30562 527 673 4.1E-252 T 14-09-2016 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 58 652 1.5E-167 T 14-09-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 Gene3D G3DSA:4.10.860.10 231 292 2.7E-17 T 14-09-2016 IPR001943 UVR domain GO:0005515 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 Pfam PF12826 Helix-hairpin-helix motif 628 678 6.7E-7 T 14-09-2016 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 SUPERFAMILY SSF47781 587 676 8.9E-22 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 SMART SM00465 66 147 5.0E-17 T 14-09-2016 IPR000305 GIY-YIG nuclease superfamily AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 PANTHER PTHR30562:SF1 527 673 4.1E-252 T 14-09-2016 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 PANTHER PTHR30562:SF1 23 506 4.1E-252 T 14-09-2016 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 Pfam PF02151 UvrB/uvrC motif 254 286 3.6E-10 T 14-09-2016 IPR001943 UVR domain GO:0005515 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 SUPERFAMILY SSF82771 65 149 6.15E-20 T 14-09-2016 IPR000305 GIY-YIG nuclease superfamily AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 Gene3D G3DSA:1.10.150.20 623 674 1.8E-20 T 14-09-2016 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 Gene3D G3DSA:3.40.1440.10 66 146 8.6E-8 T 14-09-2016 IPR027299 GIY-YIG domain AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 Hamap MF_00203 UvrABC system protein C [uvrC]. 53 672 27.334 T 14-09-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 SUPERFAMILY SSF46600 239 292 6.8E-13 T 14-09-2016 IPR001943 UVR domain GO:0005515 AMK01_RS07535 e414ee208ac61b3d7f6b845e22c39a4d 679 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 430 607 1.3E-51 T 14-09-2016 IPR001162 UvrC family homology region AMK01_RS24015 5f9fc1da771f4177334fd853b935f1b6 179 PANTHER PTHR10947 106 179 1.6E-27 T 14-09-2016 AMK01_RS24015 5f9fc1da771f4177334fd853b935f1b6 179 PANTHER PTHR10947 1 86 1.6E-27 T 14-09-2016 AMK01_RS24015 5f9fc1da771f4177334fd853b935f1b6 179 SUPERFAMILY SSF55681 2 176 5.47E-30 T 14-09-2016 AMK01_RS24015 5f9fc1da771f4177334fd853b935f1b6 179 PANTHER PTHR10947:SF0 1 86 1.6E-27 T 14-09-2016 AMK01_RS24015 5f9fc1da771f4177334fd853b935f1b6 179 Gene3D G3DSA:3.30.930.10 1 179 2.6E-47 T 14-09-2016 AMK01_RS24015 5f9fc1da771f4177334fd853b935f1b6 179 PANTHER PTHR10947:SF0 106 179 1.6E-27 T 14-09-2016 AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 SUPERFAMILY SSF51735 142 310 3.95E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 SUPERFAMILY SSF50129 4 185 6.7E-56 T 14-09-2016 IPR011032 GroES-like AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 136 3.6E-33 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 PANTHER PTHR11695:SF280 18 351 3.1E-144 T 14-09-2016 AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 Gene3D G3DSA:3.40.50.720 173 290 1.5E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 SMART SM00829 15 310 4.3E-6 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 14-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 Pfam PF00107 Zinc-binding dehydrogenase 180 305 2.7E-31 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 Gene3D G3DSA:3.90.180.10 3 172 2.4E-67 T 14-09-2016 IPR011032 GroES-like AMK01_RS03175 1f0bf648003275cfa485c5c29a99abe4 357 PANTHER PTHR11695 18 351 3.1E-144 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 PANTHER PTHR10285:SF7 14 276 7.4E-138 T 14-09-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 Gene3D G3DSA:3.40.50.300 23 330 1.2E-103 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 SUPERFAMILY SSF52540 22 330 1.31E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 PIRSF PIRSF000545 15 331 3.4E-140 T 14-09-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 24 330 3.0E-128 T 14-09-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 Hamap MF_00215 Pantothenate kinase [coaA]. 1 331 181.029 T 14-09-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 PANTHER PTHR10285:SF7 292 331 7.4E-138 T 14-09-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 104 260 1.2E-12 T 14-09-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 PANTHER PTHR10285 292 331 7.4E-138 T 14-09-2016 AMK01_RS00205 40a937cd3dbfe6a5000a35d1bf351753 331 PANTHER PTHR10285 14 276 7.4E-138 T 14-09-2016 AMK01_RS19030 855e429636f687e8a56c501f07179834 317 PANTHER PTHR34294:SF2 10 316 3.1E-99 T 14-09-2016 AMK01_RS19030 855e429636f687e8a56c501f07179834 317 Pfam PF04198 Putative sugar-binding domain 61 316 1.3E-75 T 14-09-2016 IPR007324 Sugar-binding domain, putative GO:0030246 AMK01_RS19030 855e429636f687e8a56c501f07179834 317 SUPERFAMILY SSF100950 61 316 5.69E-68 T 14-09-2016 AMK01_RS19030 855e429636f687e8a56c501f07179834 317 PANTHER PTHR34294 10 316 3.1E-99 T 14-09-2016 AMK01_RS19030 855e429636f687e8a56c501f07179834 317 Gene3D G3DSA:3.40.50.1360 59 316 6.4E-73 T 14-09-2016 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 685 6.0E-10 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 647 6.0E-10 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 704 6.0E-10 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 PANTHER PTHR24423 333 703 5.0E-78 T 14-09-2016 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 PANTHER PTHR24423 9 17 5.0E-78 T 14-09-2016 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 589 703 9.3E-21 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 Gene3D G3DSA:3.30.565.10 545 707 6.7E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 SMART SM00387 588 707 2.7E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 SMART SM00086 411 451 1.9E-5 T 14-09-2016 IPR001610 PAC motif AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 333 457 4.0E-31 T 14-09-2016 IPR000014 PAS domain AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 SUPERFAMILY SSF55874 535 703 2.62E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 Pfam PF00512 His Kinase A (phospho-acceptor) domain 479 544 4.1E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 Gene3D G3DSA:3.30.450.20 328 449 5.4E-25 T 14-09-2016 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 SMART SM00091 335 401 7.5E-11 T 14-09-2016 IPR000014 PAS domain AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 SUPERFAMILY SSF47384 464 546 3.92E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 SUPERFAMILY SSF55785 346 459 4.67E-29 T 14-09-2016 IPR000014 PAS domain AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 Gene3D G3DSA:1.10.287.130 471 542 2.3E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 SMART SM00388 478 546 2.6E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03325 63795a741945c5779d15fc233415ecc5 714 Pfam PF00989 PAS fold 339 448 5.3E-17 T 14-09-2016 IPR013767 PAS fold GO:0006355 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 Gene3D G3DSA:1.10.10.60 174 222 9.6E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 Gene3D G3DSA:2.60.120.280 17 158 3.6E-15 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 14-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 SUPERFAMILY SSF46689 221 269 4.03E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 Pfam PF02311 AraC-like ligand binding domain 26 138 1.2E-12 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 Gene3D G3DSA:1.10.10.60 223 269 6.0E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 SUPERFAMILY SSF46689 174 218 7.62E-5 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 Pfam PF12833 Helix-turn-helix domain 190 268 4.6E-21 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 PANTHER PTHR11019 12 272 2.5E-23 T 14-09-2016 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 SUPERFAMILY SSF51215 19 156 4.84E-15 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS13340 505eed7efce3d13038a9acc34d7dfb54 273 SMART SM00342 184 267 4.9E-31 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS14835 16937bdc6c52ca1638144920c3138b76 367 Pfam PF13343 Bacterial extracellular solute-binding protein 95 325 1.5E-37 T 14-09-2016 AMK01_RS14835 16937bdc6c52ca1638144920c3138b76 367 Gene3D G3DSA:3.40.190.10 287 326 3.8E-26 T 14-09-2016 AMK01_RS14835 16937bdc6c52ca1638144920c3138b76 367 Gene3D G3DSA:3.40.190.10 9 140 3.8E-26 T 14-09-2016 AMK01_RS14835 16937bdc6c52ca1638144920c3138b76 367 SUPERFAMILY SSF53850 43 361 1.25E-50 T 14-09-2016 AMK01_RS14835 16937bdc6c52ca1638144920c3138b76 367 PANTHER PTHR30006:SF10 1 300 3.8E-37 T 14-09-2016 AMK01_RS14835 16937bdc6c52ca1638144920c3138b76 367 Gene3D G3DSA:3.40.190.10 142 286 1.1E-24 T 14-09-2016 AMK01_RS14835 16937bdc6c52ca1638144920c3138b76 367 PANTHER PTHR30006 1 300 3.8E-37 T 14-09-2016 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 SMART SM00448 4 118 1.0E-25 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 Gene3D G3DSA:3.40.50.2300 2 128 6.8E-28 T 14-09-2016 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.3E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.3E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.3E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 Gene3D G3DSA:1.10.10.10 147 205 6.8E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 SUPERFAMILY SSF52172 1 175 7.78E-26 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 9.8E-19 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 SMART SM00421 149 206 1.2E-20 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 PANTHER PTHR26402 4 209 4.7E-76 T 14-09-2016 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 PANTHER PTHR26402:SF474 4 209 4.7E-76 T 14-09-2016 AMK01_RS02845 53ff3f9c7c10a63295c5aa7bcd17234c 215 Pfam PF00072 Response regulator receiver domain 6 118 5.4E-23 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 Gene3D G3DSA:2.40.10.10 44 118 4.6E-22 T 14-09-2016 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 PRINTS PR00834 HtrA/DegQ protease family signature 57 69 1.1E-42 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 PRINTS PR00834 HtrA/DegQ protease family signature 78 98 1.1E-42 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 PRINTS PR00834 HtrA/DegQ protease family signature 262 274 1.1E-42 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 PRINTS PR00834 HtrA/DegQ protease family signature 177 194 1.1E-42 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 PRINTS PR00834 HtrA/DegQ protease family signature 118 142 1.1E-42 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 PRINTS PR00834 HtrA/DegQ protease family signature 155 172 1.1E-42 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 SMART SM00228 220 304 7.7E-6 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 SUPERFAMILY SSF50494 21 216 2.31E-50 T 14-09-2016 IPR009003 Peptidase S1, PA clan AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 PANTHER PTHR22939 17 300 2.4E-83 T 14-09-2016 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 Gene3D G3DSA:2.40.10.10 119 222 2.8E-37 T 14-09-2016 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 Pfam PF13365 Trypsin-like peptidase domain 48 184 5.5E-30 T 14-09-2016 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 SUPERFAMILY SSF50156 192 302 3.15E-14 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 Gene3D G3DSA:2.30.42.10 223 301 1.2E-15 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 PANTHER PTHR22939:SF77 17 300 2.4E-83 T 14-09-2016 AMK01_RS13200 fe8e364d15166c333b34b8e212634a10 318 Pfam PF13180 PDZ domain 244 298 4.9E-9 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS20885 c2e3b309e04c40ae7cca30bf9fa0fd41 195 Gene3D G3DSA:3.40.630.30 7 167 2.9E-35 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS20885 c2e3b309e04c40ae7cca30bf9fa0fd41 195 PANTHER PTHR13256 1 169 1.9E-29 T 14-09-2016 AMK01_RS20885 c2e3b309e04c40ae7cca30bf9fa0fd41 195 Pfam PF13302 Acetyltransferase (GNAT) domain 26 161 3.6E-26 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS20885 c2e3b309e04c40ae7cca30bf9fa0fd41 195 SUPERFAMILY SSF55729 18 179 1.06E-31 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19490 3c13a38d6526f663101ab77b34fb7ddc 260 Pfam PF01694 Rhomboid family 71 218 2.8E-38 T 14-09-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMK01_RS19490 3c13a38d6526f663101ab77b34fb7ddc 260 PANTHER PTHR22936 17 34 6.4E-35 T 14-09-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 AMK01_RS19490 3c13a38d6526f663101ab77b34fb7ddc 260 PANTHER PTHR22936 50 219 6.4E-35 T 14-09-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 AMK01_RS19490 3c13a38d6526f663101ab77b34fb7ddc 260 Gene3D G3DSA:1.20.1540.10 16 218 5.3E-40 T 14-09-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AMK01_RS19490 3c13a38d6526f663101ab77b34fb7ddc 260 SUPERFAMILY SSF144091 14 219 4.45E-43 T 14-09-2016 AMK01_RS12700 d6765a17bf53a88b852ef0619a7e78e8 335 PANTHER PTHR11751:SF3 9 334 1.7E-43 T 14-09-2016 AMK01_RS12700 d6765a17bf53a88b852ef0619a7e78e8 335 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 7 331 2.1E-101 T 14-09-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 AMK01_RS12700 d6765a17bf53a88b852ef0619a7e78e8 335 Gene3D G3DSA:3.40.640.10 45 244 3.6E-46 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS12700 d6765a17bf53a88b852ef0619a7e78e8 335 PANTHER PTHR11751 9 334 1.7E-43 T 14-09-2016 AMK01_RS12700 d6765a17bf53a88b852ef0619a7e78e8 335 Gene3D G3DSA:3.90.1150.10 249 313 1.7E-4 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS12700 d6765a17bf53a88b852ef0619a7e78e8 335 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 198 211 - T 14-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK01_RS12700 d6765a17bf53a88b852ef0619a7e78e8 335 SUPERFAMILY SSF53383 6 332 3.34E-52 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS12700 d6765a17bf53a88b852ef0619a7e78e8 335 Pfam PF00155 Aminotransferase class I and II 34 321 2.2E-31 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 PANTHER PTHR13947 130 303 4.7E-43 T 14-09-2016 AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 SMART SM00347 26 126 3.5E-6 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 Pfam PF12802 MarR family 34 90 9.2E-17 T 14-09-2016 AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 Gene3D G3DSA:1.10.10.10 8 142 1.7E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 Gene3D G3DSA:3.40.630.30 150 302 4.2E-31 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 SUPERFAMILY SSF55729 150 292 5.15E-25 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 Pfam PF13673 Acetyltransferase (GNAT) domain 195 290 7.7E-12 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 PANTHER PTHR13947:SF16 130 303 4.7E-43 T 14-09-2016 AMK01_RS14185 e7f806857eda84bae403f24d15ffe589 305 SUPERFAMILY SSF46785 8 141 1.1E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 121 2.9E-32 T 14-09-2016 IPR018948 GTP-binding protein TrmE, N-terminal AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Pfam PF12631 MnmE helical domain 124 436 6.3E-50 T 14-09-2016 IPR025867 MnmE, helical domain AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 PANTHER PTHR11649:SF56 9 439 1.3E-161 T 14-09-2016 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 PRINTS PR00449 Transforming protein P21 ras signature 259 281 1.5E-8 T 14-09-2016 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 PRINTS PR00449 Transforming protein P21 ras signature 219 240 1.5E-8 T 14-09-2016 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 PRINTS PR00449 Transforming protein P21 ras signature 318 331 1.5E-8 T 14-09-2016 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 PANTHER PTHR11649 9 439 1.3E-161 T 14-09-2016 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Pfam PF01926 50S ribosome-binding GTPase 220 309 5.0E-21 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Gene3D G3DSA:3.40.50.300 215 248 2.0E-7 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Gene3D G3DSA:3.40.50.300 290 358 6.2E-4 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Gene3D G3DSA:3.30.1360.120 2 122 1.0E-39 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 SUPERFAMILY SSF52540 73 153 2.55E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 SUPERFAMILY SSF52540 190 358 2.55E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 439 30.222 T 14-09-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 19 439 2.3E-83 T 14-09-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 SUPERFAMILY SSF116878 122 222 9.81E-47 T 14-09-2016 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 SUPERFAMILY SSF116878 366 439 9.81E-47 T 14-09-2016 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Gene3D G3DSA:1.20.120.430 371 439 2.8E-54 T 14-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Gene3D G3DSA:1.20.120.430 123 183 2.8E-54 T 14-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 Gene3D G3DSA:1.20.120.430 249 273 2.8E-54 T 14-09-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK01_RS21185 f8ff03f64b480a93a29750fe82d009b1 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 219 339 1.1E-21 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 14-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 412 3.6E-99 T 14-09-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 Gene3D G3DSA:3.80.30.20 136 364 3.5E-64 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 Pfam PF00919 Uncharacterized protein family UPF0004 5 90 6.6E-18 T 14-09-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 SMART SM00729 137 355 1.7E-55 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 PANTHER PTHR11918:SF45 4 378 1.4E-110 T 14-09-2016 AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 PANTHER PTHR11918 4 378 1.4E-110 T 14-09-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 Pfam PF04055 Radical SAM superfamily 142 313 3.0E-22 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 SUPERFAMILY SSF102114 118 356 4.05E-52 T 14-09-2016 AMK01_RS20310 641e0b32d8238b04a45f8a83e96585f5 423 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 391 1.4E-129 T 14-09-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 Gene3D G3DSA:2.60.40.420 109 260 1.7E-40 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 117 237 1.1E-14 T 14-09-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 SUPERFAMILY SSF49503 109 134 2.17E-42 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 SUPERFAMILY SSF49503 165 261 2.17E-42 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 PANTHER PTHR22888 1 256 1.5E-75 T 14-09-2016 AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 Gene3D G3DSA:1.10.287.90 35 84 7.6E-6 T 14-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 188 236 - T 14-09-2016 IPR001505 Copper centre Cu(A) GO:0005507 AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 PANTHER PTHR22888:SF2 1 256 1.5E-75 T 14-09-2016 AMK01_RS13440 224811b203f806a67cf7f21301023b27 272 SUPERFAMILY SSF81464 23 102 1.53E-5 T 14-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 Gene3D G3DSA:1.25.40.10 347 589 4.7E-39 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 Gene3D G3DSA:3.30.70.1230 7 172 5.5E-28 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 7 166 4.2E-14 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 SUPERFAMILY SSF48452 398 579 1.4E-23 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 Gene3D G3DSA:3.40.50.10070 181 306 7.4E-4 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 SUPERFAMILY SSF55073 2 176 2.83E-44 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 PANTHER PTHR23083 316 577 2.7E-32 T 14-09-2016 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 Pfam PF13432 Tetratricopeptide repeat 424 474 2.5E-7 T 14-09-2016 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 SMART SM00028 441 474 3.7 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 SMART SM00028 550 583 1.7 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 SMART SM00028 407 440 0.2 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18500 fb51ad25eec58b2bd67fc9468b395c61 622 Pfam PF13431 Tetratricopeptide repeat 541 570 4.8E-5 T 14-09-2016 AMK01_RS07280 feb565c04cea676188494807888fc1bd 163 SUPERFAMILY SSF51316 5 130 9.83E-44 T 14-09-2016 IPR011057 Mss4-like AMK01_RS07280 feb565c04cea676188494807888fc1bd 163 PANTHER PTHR33337:SF4 7 130 1.4E-36 T 14-09-2016 AMK01_RS07280 feb565c04cea676188494807888fc1bd 163 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 109 9.6E-20 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS07280 feb565c04cea676188494807888fc1bd 163 PANTHER PTHR33337 7 130 1.4E-36 T 14-09-2016 AMK01_RS07280 feb565c04cea676188494807888fc1bd 163 Gene3D G3DSA:3.90.1590.10 4 159 3.8E-45 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS09585 df8b7d555367ce16f8f4c4ff43764810 257 PANTHER PTHR24220 19 257 3.7E-182 T 14-09-2016 AMK01_RS09585 df8b7d555367ce16f8f4c4ff43764810 257 PANTHER PTHR24220:SF490 19 257 3.7E-182 T 14-09-2016 AMK01_RS09585 df8b7d555367ce16f8f4c4ff43764810 257 SMART SM00382 42 229 7.6E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS09585 df8b7d555367ce16f8f4c4ff43764810 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS09585 df8b7d555367ce16f8f4c4ff43764810 257 Gene3D G3DSA:3.40.50.300 17 253 2.1E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09585 df8b7d555367ce16f8f4c4ff43764810 257 PIRSF PIRSF039085 14 257 3.1E-109 T 14-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK01_RS09585 df8b7d555367ce16f8f4c4ff43764810 257 Pfam PF00005 ABC transporter 33 181 1.9E-38 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS09585 df8b7d555367ce16f8f4c4ff43764810 257 SUPERFAMILY SSF52540 18 251 2.41E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07530 1b890c68d6fef452ef84cde095426a46 196 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 7 191 6.4E-47 T 14-09-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AMK01_RS07530 1b890c68d6fef452ef84cde095426a46 196 PIRSF PIRSF000847 3 196 9.0E-46 T 14-09-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AMK01_RS07530 1b890c68d6fef452ef84cde095426a46 196 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK01_RS07530 1b890c68d6fef452ef84cde095426a46 196 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 79 8.2E-18 T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK01_RS07530 1b890c68d6fef452ef84cde095426a46 196 PANTHER PTHR14269 3 185 9.5E-43 T 14-09-2016 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 339 389 1.7E-9 T 14-09-2016 IPR006847 Translation initiation factor IF-2, N-terminal AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 PANTHER PTHR23115 771 915 1.9E-203 T 14-09-2016 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Gene3D G3DSA:2.40.30.10 819 915 5.4E-36 T 14-09-2016 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 417 574 2.8E-34 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 ProSitePatterns PS01176 Initiation factor 2 signature. 868 890 - T 14-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Gene3D G3DSA:3.40.50.10050 718 796 1.1E-24 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Pfam PF00009 Elongation factor Tu GTP binding domain 420 576 3.7E-33 T 14-09-2016 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 SUPERFAMILY SSF50447 819 915 1.61E-30 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 SUPERFAMILY SSF50447 587 671 6.24E-26 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 7 915 17.028 T 14-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 332 917 2.1E-239 T 14-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 15 52 1.6E-8 T 14-09-2016 IPR013575 Initiation factor 2 associated domain, bacterial AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Gene3D G3DSA:2.40.30.10 586 679 4.4E-24 T 14-09-2016 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 PANTHER PTHR23115:SF184 399 745 1.9E-203 T 14-09-2016 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Pfam PF11987 Translation-initiation factor 2 702 807 3.8E-40 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 Gene3D G3DSA:3.40.50.300 412 574 8.8E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 PANTHER PTHR23115 399 745 1.9E-203 T 14-09-2016 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 PANTHER PTHR23115:SF184 771 915 1.9E-203 T 14-09-2016 AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 SUPERFAMILY SSF52540 412 587 2.12E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00730 f9c8b827e04ec67f77b68d80736834f8 917 SUPERFAMILY SSF52156 699 824 4.05E-37 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK01_RS18920 c626da31d2b83007e7d7136c402652bf 475 Gene3D G3DSA:3.40.605.10 2 258 5.9E-92 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS18920 c626da31d2b83007e7d7136c402652bf 475 PANTHER PTHR11699:SF109 1 474 2.5E-262 T 14-09-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 AMK01_RS18920 c626da31d2b83007e7d7136c402652bf 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 14-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS18920 c626da31d2b83007e7d7136c402652bf 475 PANTHER PTHR11699 1 474 2.5E-262 T 14-09-2016 AMK01_RS18920 c626da31d2b83007e7d7136c402652bf 475 SUPERFAMILY SSF53720 3 473 6.68E-150 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS18920 c626da31d2b83007e7d7136c402652bf 475 Pfam PF00171 Aldehyde dehydrogenase family 17 470 3.6E-160 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS18920 c626da31d2b83007e7d7136c402652bf 475 Gene3D G3DSA:3.40.309.10 259 445 1.8E-58 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS08675 de7396011bd494a0fe982bec94752437 502 Gene3D G3DSA:3.40.309.10 277 462 5.5E-67 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS08675 de7396011bd494a0fe982bec94752437 502 Pfam PF00171 Aldehyde dehydrogenase family 26 486 9.6E-169 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS08675 de7396011bd494a0fe982bec94752437 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 290 301 - T 14-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS08675 de7396011bd494a0fe982bec94752437 502 SUPERFAMILY SSF53720 9 487 3.14E-162 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS08675 de7396011bd494a0fe982bec94752437 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 14-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS08675 de7396011bd494a0fe982bec94752437 502 Gene3D G3DSA:3.40.605.10 17 276 2.7E-93 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS08675 de7396011bd494a0fe982bec94752437 502 PANTHER PTHR11699 2 486 1.8E-211 T 14-09-2016 AMK01_RS25115 111ffbc7038d7bd205d4898536240583 251 Pfam PF02614 Glucuronate isomerase 2 248 6.6E-36 T 14-09-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 AMK01_RS25115 111ffbc7038d7bd205d4898536240583 251 Gene3D G3DSA:3.20.20.140 1 251 1.4E-87 T 14-09-2016 AMK01_RS25115 111ffbc7038d7bd205d4898536240583 251 PANTHER PTHR30068 2 251 7.6E-65 T 14-09-2016 AMK01_RS25115 111ffbc7038d7bd205d4898536240583 251 SUPERFAMILY SSF51556 1 251 1.86E-73 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS25115 111ffbc7038d7bd205d4898536240583 251 PANTHER PTHR30068:SF4 2 251 7.6E-65 T 14-09-2016 AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 PANTHER PTHR30537 1 293 5.8E-128 T 14-09-2016 AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 PANTHER PTHR30537:SF1 1 293 5.8E-128 T 14-09-2016 AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 Gene3D G3DSA:1.10.10.10 5 89 7.2E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 Gene3D G3DSA:3.40.190.10 180 264 6.4E-17 T 14-09-2016 AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 Pfam PF03466 LysR substrate binding domain 90 293 3.0E-35 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 SUPERFAMILY SSF46785 6 90 2.95E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 SUPERFAMILY SSF53850 90 296 2.17E-38 T 14-09-2016 AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-19 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS01515 0fc3165931afcafa46924d4f9104fb78 302 Gene3D G3DSA:3.40.190.10 94 179 3.9E-19 T 14-09-2016 AMK01_RS13205 38de3c115860bc7baf875ce1efee1e70 278 Gene3D G3DSA:3.40.50.1820 2 277 2.2E-74 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS13205 38de3c115860bc7baf875ce1efee1e70 278 SUPERFAMILY SSF53474 4 276 8.45E-65 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS13205 38de3c115860bc7baf875ce1efee1e70 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 5.8E-11 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS13205 38de3c115860bc7baf875ce1efee1e70 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 5.8E-11 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS13205 38de3c115860bc7baf875ce1efee1e70 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 5.8E-11 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS13205 38de3c115860bc7baf875ce1efee1e70 278 PANTHER PTHR10992 3 278 6.9E-123 T 14-09-2016 AMK01_RS13205 38de3c115860bc7baf875ce1efee1e70 278 Pfam PF00561 alpha/beta hydrolase fold 24 258 4.6E-22 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS13205 38de3c115860bc7baf875ce1efee1e70 278 PANTHER PTHR10992:SF859 3 278 6.9E-123 T 14-09-2016 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 PRINTS PR00834 HtrA/DegQ protease family signature 236 248 8.8E-8 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 PRINTS PR00834 HtrA/DegQ protease family signature 157 174 8.8E-8 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 PRINTS PR00834 HtrA/DegQ protease family signature 42 54 8.8E-8 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 PRINTS PR00834 HtrA/DegQ protease family signature 63 83 8.8E-8 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 SMART SM00228 208 279 1.3E-7 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 PANTHER PTHR22939 3 292 1.8E-50 T 14-09-2016 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 Pfam PF13365 Trypsin-like peptidase domain 33 164 1.6E-11 T 14-09-2016 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 Gene3D G3DSA:2.30.42.10 217 286 5.4E-17 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 Pfam PF13180 PDZ domain 214 286 1.9E-14 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 SUPERFAMILY SSF50156 201 288 2.37E-15 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 SUPERFAMILY SSF50494 4 201 1.35E-28 T 14-09-2016 IPR009003 Peptidase S1, PA clan AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 Gene3D G3DSA:2.40.10.10 104 211 4.4E-8 T 14-09-2016 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 PANTHER PTHR22939:SF98 3 292 1.8E-50 T 14-09-2016 AMK01_RS06505 46765a19d4a3436ca580200ab9388e2c 301 Gene3D G3DSA:2.40.10.10 30 103 3.0E-11 T 14-09-2016 AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 SUPERFAMILY SSF46894 168 238 2.99E-15 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 232 6.0E-12 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 SUPERFAMILY SSF75516 17 168 1.83E-23 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 SMART SM00421 175 232 8.0E-15 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 Gene3D G3DSA:1.10.10.10 181 238 2.6E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 Gene3D G3DSA:3.30.450.80 17 180 4.1E-22 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 4.1E-5 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 4.1E-5 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 4.1E-5 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05975 3dd4ab1358041cb0176d8ad4ec5e9f42 240 Pfam PF03472 Autoinducer binding domain 21 164 4.0E-27 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS06790 0fb3e7f1896150d877c93a51ae6d7913 89 SUPERFAMILY SSF81901 17 64 4.19E-6 T 14-09-2016 AMK01_RS06790 0fb3e7f1896150d877c93a51ae6d7913 89 Gene3D G3DSA:1.25.40.10 17 72 2.4E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 PANTHER PTHR24096 192 565 5.7E-167 T 14-09-2016 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 PANTHER PTHR24096 23 164 5.7E-167 T 14-09-2016 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 14-09-2016 IPR020845 AMP-binding, conserved site AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 Gene3D G3DSA:3.40.50.980 36 163 6.9E-40 T 14-09-2016 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 Gene3D G3DSA:3.40.50.980 195 227 6.9E-40 T 14-09-2016 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 Gene3D G3DSA:3.30.300.30 470 565 3.1E-25 T 14-09-2016 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 Gene3D G3DSA:3.40.50.980 228 393 2.2E-39 T 14-09-2016 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 Pfam PF00501 AMP-binding enzyme 42 475 7.9E-105 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 SUPERFAMILY SSF56801 23 565 1.09E-144 T 14-09-2016 AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 484 558 1.2E-15 T 14-09-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK01_RS02580 94b28a835419b08262a5ff390402cb4b 566 Gene3D G3DSA:2.30.38.10 394 466 2.1E-29 T 14-09-2016 AMK01_RS15000 aa9d400125aac1fca9715915e0ce6364 313 SMART SM00255 2 145 1.1E-7 T 14-09-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMK01_RS15000 aa9d400125aac1fca9715915e0ce6364 313 Gene3D G3DSA:3.40.50.10140 5 108 5.1E-13 T 14-09-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMK01_RS15000 aa9d400125aac1fca9715915e0ce6364 313 Pfam PF13676 TIR domain 6 112 8.3E-22 T 14-09-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMK01_RS15000 aa9d400125aac1fca9715915e0ce6364 313 SUPERFAMILY SSF52200 5 142 5.49E-22 T 14-09-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 Pfam PF01218 Coproporphyrinogen III oxidase 23 302 7.6E-87 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 Gene3D G3DSA:3.40.1500.10 12 302 1.2E-107 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 PRINTS PR00073 Coprogen oxidase signature 53 69 5.6E-55 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 PRINTS PR00073 Coprogen oxidase signature 260 287 5.6E-55 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 PRINTS PR00073 Coprogen oxidase signature 71 92 5.6E-55 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 PRINTS PR00073 Coprogen oxidase signature 113 137 5.6E-55 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 PRINTS PR00073 Coprogen oxidase signature 184 213 5.6E-55 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 PRINTS PR00073 Coprogen oxidase signature 288 303 5.6E-55 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 15 303 52.509 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 SUPERFAMILY SSF102886 13 303 1.83E-110 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 188 212 - T 14-09-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 PIRSF PIRSF000166 3 303 1.5E-107 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS15530 56ee7153d0bb79767bcd886a6a14d129 303 PANTHER PTHR10755 12 302 3.3E-113 T 14-09-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK01_RS00670 cc3cc6ed4498ac7111d15afb05c8d528 139 SUPERFAMILY SSF46785 11 133 5.9E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00670 cc3cc6ed4498ac7111d15afb05c8d528 139 PANTHER PTHR33202 13 133 1.4E-47 T 14-09-2016 AMK01_RS00670 cc3cc6ed4498ac7111d15afb05c8d528 139 PANTHER PTHR33202:SF3 13 133 1.4E-47 T 14-09-2016 AMK01_RS00670 cc3cc6ed4498ac7111d15afb05c8d528 139 Gene3D G3DSA:1.10.10.10 10 88 2.1E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00670 cc3cc6ed4498ac7111d15afb05c8d528 139 Pfam PF01475 Ferric uptake regulator family 16 107 5.0E-20 T 14-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK01_RS04500 78282f067a6e4027c7a1bf16d7650c1c 183 Pfam PF04011 LemA family 3 183 5.9E-67 T 14-09-2016 IPR007156 LemA AMK01_RS04500 78282f067a6e4027c7a1bf16d7650c1c 183 SUPERFAMILY SSF140478 22 171 1.23E-53 T 14-09-2016 IPR023353 LemA-like domain AMK01_RS04500 78282f067a6e4027c7a1bf16d7650c1c 183 PANTHER PTHR34478 1 183 6.5E-77 T 14-09-2016 AMK01_RS04500 78282f067a6e4027c7a1bf16d7650c1c 183 Gene3D G3DSA:1.20.1440.20 10 183 1.2E-63 T 14-09-2016 IPR023353 LemA-like domain AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 Pfam PF07702 UTRA domain 111 246 5.9E-35 T 14-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 SUPERFAMILY SSF64288 75 252 1.05E-45 T 14-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 Gene3D G3DSA:1.10.10.10 23 82 1.1E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 Gene3D G3DSA:3.40.1410.10 83 252 5.4E-45 T 14-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 SUPERFAMILY SSF46785 22 89 4.16E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 1.2E-5 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 1.2E-5 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 PANTHER PTHR11751 139 162 3.2E-19 T 14-09-2016 AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 PANTHER PTHR11751 22 90 3.2E-19 T 14-09-2016 AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 87 1.5E-17 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 SMART SM00866 110 246 3.2E-35 T 14-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK01_RS20715 55ce78b48db6ca1349a25d49413b7ee4 258 SMART SM00345 28 87 3.5E-17 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 PANTHER PTHR10815:SF7 1 172 6.9E-45 T 14-09-2016 AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 90 173 1.2E-25 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 SUPERFAMILY SSF46767 89 174 1.83E-21 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 PANTHER PTHR10815 1 172 6.9E-45 T 14-09-2016 AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 91 171 1.2E-21 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 140 146 - T 14-09-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 SUPERFAMILY SSF53155 7 85 4.32E-11 T 14-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 Gene3D G3DSA:1.10.10.10 89 175 3.2E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01615 cefb1be73f9f08e1af72a412c0f91c93 187 Gene3D G3DSA:3.30.160.70 7 78 3.8E-5 T 14-09-2016 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 SUPERFAMILY SSF53597 325 429 2.27E-18 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 14-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 Pfam PF01872 RibD C-terminal domain 151 252 8.0E-20 T 14-09-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 Pfam PF01872 RibD C-terminal domain 350 413 1.3E-13 T 14-09-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 Gene3D G3DSA:3.40.140.10 6 132 2.2E-28 T 14-09-2016 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 253 9.5E-81 T 14-09-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 103 2.5E-15 T 14-09-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 PANTHER PTHR11079 6 211 2.1E-53 T 14-09-2016 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 SUPERFAMILY SSF53927 7 148 2.37E-41 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 PANTHER PTHR11079:SF10 6 211 2.1E-53 T 14-09-2016 AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 Gene3D G3DSA:3.40.430.10 326 430 7.6E-84 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 Gene3D G3DSA:3.40.430.10 133 254 7.6E-84 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS07695 df848b64b17d06ba2a943b7a5ee285bc 436 SUPERFAMILY SSF53597 149 256 5.15E-28 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS14725 3484e135b52a4212331ce1d15fa29bcc 265 Gene3D G3DSA:3.20.20.80 54 257 3.4E-70 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS14725 3484e135b52a4212331ce1d15fa29bcc 265 SMART SM00641 55 161 5.9E-24 T 14-09-2016 IPR018077 Glycoside hydrolase, family 25 subgroup AMK01_RS14725 3484e135b52a4212331ce1d15fa29bcc 265 PANTHER PTHR34135 50 264 2.8E-59 T 14-09-2016 AMK01_RS14725 3484e135b52a4212331ce1d15fa29bcc 265 PANTHER PTHR34135:SF2 50 264 2.8E-59 T 14-09-2016 AMK01_RS14725 3484e135b52a4212331ce1d15fa29bcc 265 SUPERFAMILY SSF51445 53 257 5.05E-68 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS14725 3484e135b52a4212331ce1d15fa29bcc 265 Pfam PF01183 Glycosyl hydrolases family 25 58 236 7.4E-61 T 14-09-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 SUPERFAMILY SSF47364 217 289 3.01E-20 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 PANTHER PTHR11564:SF16 212 515 9.1E-113 T 14-09-2016 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 Pfam PF02881 SRP54-type protein, helical bundle domain 233 294 1.9E-8 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 245 515 1.7E-95 T 14-09-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 Pfam PF00448 SRP54-type protein, GTPase domain 316 515 1.2E-71 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 PANTHER PTHR11564 212 515 9.1E-113 T 14-09-2016 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 245 517 59.861 T 14-09-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 Gene3D G3DSA:3.40.50.300 313 517 1.7E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 490 503 - T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 SUPERFAMILY SSF52540 314 516 1.95E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 SMART SM00963 222 301 2.0E-15 T 14-09-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 Gene3D G3DSA:1.20.120.140 211 297 2.1E-23 T 14-09-2016 AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 SMART SM00382 315 495 7.0E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20305 e5473420117b1dffaea40ea1a346f48a 520 SMART SM00962 316 517 5.7E-109 T 14-09-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 124 138 - T 14-09-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 PANTHER PTHR21600 23 260 4.0E-71 T 14-09-2016 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 SUPERFAMILY SSF55120 83 254 4.32E-41 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 SUPERFAMILY SSF55174 27 113 6.33E-14 T 14-09-2016 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 90 250 1.9E-46 T 14-09-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 Pfam PF01479 S4 domain 27 62 2.2E-7 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 PANTHER PTHR21600:SF23 23 260 4.0E-71 T 14-09-2016 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 Gene3D G3DSA:3.10.290.10 29 88 1.4E-13 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 SMART SM00363 25 83 0.0046 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS17590 232048947c8c7bcccb9ce7ff7f35d6c3 267 Pfam PF00849 RNA pseudouridylate synthase 86 219 4.5E-21 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 SUPERFAMILY SSF54292 1 74 5.0E-20 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 SUPERFAMILY SSF53706 215 724 5.1E-98 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 222 239 - T 14-09-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Gene3D G3DSA:3.40.228.10 364 440 2.7E-4 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Pfam PF00384 Molybdopterin oxidoreductase 484 674 1.6E-20 T 14-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Pfam PF00384 Molybdopterin oxidoreductase 274 407 1.0E-11 T 14-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Gene3D G3DSA:3.40.50.740 505 720 4.7E-48 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Gene3D G3DSA:3.40.50.740 274 346 4.7E-48 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Gene3D G3DSA:2.20.25.90 219 271 2.3E-17 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 SUPERFAMILY SSF54862 75 213 1.34E-36 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Gene3D G3DSA:3.30.70.20 93 203 5.4E-12 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Pfam PF01568 Molydopterin dinucleotide binding domain 745 831 5.0E-13 T 14-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 SMART SM00929 83 123 1.1E-20 T 14-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 SMART SM00926 217 271 2.9E-13 T 14-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Gene3D G3DSA:3.10.20.30 4 60 1.1E-6 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 PIRSF PIRSF036643 1 725 5.1E-160 T 14-09-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 SUPERFAMILY SSF50692 734 844 3.52E-20 T 14-09-2016 IPR009010 Aspartate decarboxylase-like domain AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 PANTHER PTHR11615:SF38 3 389 1.8E-141 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 PANTHER PTHR11615:SF38 516 821 1.8E-141 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.3E-19 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 672 3.4E-147 T 14-09-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 14-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Gene3D G3DSA:2.40.40.20 742 832 1.7E-15 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 2.6E-17 T 14-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 PANTHER PTHR11615 3 389 1.8E-141 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 PANTHER PTHR11615 516 821 1.8E-141 T 14-09-2016 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 147 157 - T 14-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 219 270 5.8E-15 T 14-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK01_RS17530 42c82e062258b4f210857114b5c42a40 859 Pfam PF12838 4Fe-4S dicluster domain 147 202 9.5E-7 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK01_RS19460 189434a5e0eff9397eaa4407ba7ec193 214 Gene3D G3DSA:1.10.340.30 43 149 1.5E-22 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS19460 189434a5e0eff9397eaa4407ba7ec193 214 SMART SM00478 54 203 5.4E-9 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK01_RS19460 189434a5e0eff9397eaa4407ba7ec193 214 PANTHER PTHR10242 4 211 3.2E-35 T 14-09-2016 AMK01_RS19460 189434a5e0eff9397eaa4407ba7ec193 214 Gene3D G3DSA:1.10.1670.10 152 202 4.7E-13 T 14-09-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMK01_RS19460 189434a5e0eff9397eaa4407ba7ec193 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 188 5.5E-9 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK01_RS19460 189434a5e0eff9397eaa4407ba7ec193 214 SUPERFAMILY SSF48150 31 203 2.27E-34 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS12840 b78d321d297da58297da05a1b0827929 718 Gene3D G3DSA:2.30.30.60 542 587 3.2E-11 T 14-09-2016 AMK01_RS12840 b78d321d297da58297da05a1b0827929 718 Gene3D G3DSA:3.30.70.100 594 681 4.8E-11 T 14-09-2016 AMK01_RS12840 b78d321d297da58297da05a1b0827929 718 SUPERFAMILY SSF82861 469 524 7.32E-13 T 14-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMK01_RS12840 b78d321d297da58297da05a1b0827929 718 PANTHER PTHR30460:SF0 392 690 4.4E-76 T 14-09-2016 AMK01_RS12840 b78d321d297da58297da05a1b0827929 718 SUPERFAMILY SSF50182 526 588 3.24E-11 T 14-09-2016 IPR010920 LSM domain AMK01_RS12840 b78d321d297da58297da05a1b0827929 718 SUPERFAMILY SSF82689 589 690 1.57E-16 T 14-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK01_RS12840 b78d321d297da58297da05a1b0827929 718 Pfam PF00924 Mechanosensitive ion channel 483 682 2.5E-44 T 14-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK01_RS12840 b78d321d297da58297da05a1b0827929 718 PANTHER PTHR30460 392 690 4.4E-76 T 14-09-2016 AMK01_RS05260 682540cf0e56cec625caef2627852f0b 170 Pfam PF03466 LysR substrate binding domain 4 160 7.3E-18 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS05260 682540cf0e56cec625caef2627852f0b 170 SUPERFAMILY SSF53850 4 164 4.52E-23 T 14-09-2016 AMK01_RS05260 682540cf0e56cec625caef2627852f0b 170 Gene3D G3DSA:3.40.190.10 31 127 3.4E-21 T 14-09-2016 AMK01_RS05260 682540cf0e56cec625caef2627852f0b 170 PANTHER PTHR30537 1 164 1.0E-33 T 14-09-2016 AMK01_RS05260 682540cf0e56cec625caef2627852f0b 170 PANTHER PTHR30537:SF26 1 164 1.0E-33 T 14-09-2016 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 SMART SM00878 351 458 3.0E-49 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 118 4.7E-37 T 14-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 124 327 3.5E-73 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 5 1152 0.0 T 14-09-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Pfam PF02436 Conserved carboxylase domain 835 1034 4.5E-71 T 14-09-2016 IPR003379 Carboxylase, conserved domain AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Gene3D G3DSA:3.40.50.20 3 137 4.9E-45 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Gene3D G3DSA:2.40.50.100 1078 1151 3.5E-25 T 14-09-2016 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 PIRSF PIRSF001594 1 1153 0.0 T 14-09-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 SUPERFAMILY SSF89000 840 1016 4.32E-54 T 14-09-2016 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Gene3D G3DSA:3.30.470.20 211 463 1.2E-94 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1109 1126 - T 14-09-2016 IPR001882 Biotin-binding site AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Gene3D G3DSA:3.20.20.70 517 826 5.1E-135 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Gene3D G3DSA:3.10.600.10 995 1070 4.5E-33 T 14-09-2016 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Gene3D G3DSA:1.10.10.60 959 994 3.7E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 161 175 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Pfam PF02785 Biotin carboxylase C-terminal domain 351 458 1.6E-32 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Pfam PF00364 Biotin-requiring enzyme 1086 1150 4.2E-17 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 PANTHER PTHR18866:SF103 2 1151 0.0 T 14-09-2016 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 SUPERFAMILY SSF52440 2 121 1.51E-39 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 SUPERFAMILY SSF51569 532 843 1.2E-82 T 14-09-2016 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 SUPERFAMILY SSF51246 346 464 2.3E-37 T 14-09-2016 IPR011054 Rudiment single hybrid motif AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Gene3D G3DSA:3.30.1490.20 138 209 8.6E-29 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 SUPERFAMILY SSF56059 91 339 1.48E-62 T 14-09-2016 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 Pfam PF00682 HMGL-like 540 811 1.1E-27 T 14-09-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 PANTHER PTHR18866 2 1151 0.0 T 14-09-2016 AMK01_RS20550 94686fffeab8a30c40ccea8d45b133a0 1154 SUPERFAMILY SSF51230 1076 1151 1.44E-20 T 14-09-2016 IPR011053 Single hybrid motif AMK01_RS16430 5bf3fefcbf18feb576863af76d4ceef4 470 Pfam PF05951 Bacterial protein of unknown function (DUF882) 66 218 5.9E-73 T 14-09-2016 IPR010275 Protein of unknown function DUF882 AMK01_RS16430 5bf3fefcbf18feb576863af76d4ceef4 470 PANTHER PTHR37425 18 266 7.6E-49 T 14-09-2016 AMK01_RS16430 5bf3fefcbf18feb576863af76d4ceef4 470 Gene3D G3DSA:3.30.1380.10 100 220 5.4E-28 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS16430 5bf3fefcbf18feb576863af76d4ceef4 470 SUPERFAMILY SSF55166 99 223 5.89E-34 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 SUPERFAMILY SSF50621 256 418 1.26E-50 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 282 1.7E-62 T 14-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 416 40.406 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.6E-25 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.6E-25 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.6E-25 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 1.6E-25 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.6E-25 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.0E-26 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 3.0E-26 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 3.0E-26 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 3.0E-26 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 415 1.2E-146 T 14-09-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PANTHER PTHR11482 2 422 5.7E-169 T 14-09-2016 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 PANTHER PTHR11482:SF5 2 422 5.7E-169 T 14-09-2016 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 392 1.6E-13 T 14-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 Gene3D G3DSA:3.20.20.10 36 269 2.7E-83 T 14-09-2016 IPR029066 PLP-binding barrel AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 Gene3D G3DSA:2.40.37.10 270 420 5.4E-45 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 SUPERFAMILY SSF51419 26 284 3.53E-82 T 14-09-2016 IPR029066 PLP-binding barrel AMK01_RS19525 874dadda58aee99e57144e0035a3276d 422 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-09-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 SUPERFAMILY SSF55811 8 169 2.84E-30 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 Gene3D G3DSA:3.90.79.10 8 167 1.2E-30 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 PANTHER PTHR11839:SF13 48 167 1.6E-28 T 14-09-2016 AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 PRINTS PR00502 NUDIX hydrolase family signature 48 62 2.8E-6 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 PRINTS PR00502 NUDIX hydrolase family signature 62 77 2.8E-6 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 Pfam PF00293 NUDIX domain 13 162 1.7E-23 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 7 172 34.291 T 14-09-2016 IPR022927 RNA pyrophosphohydrolase RppH AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 PANTHER PTHR11839 48 167 1.6E-28 T 14-09-2016 AMK01_RS20960 26409234510c39f8c63ec80d58d5cd44 177 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK01_RS04910 70d154c3b805a9af65b13e851eb76927 356 Gene3D G3DSA:3.40.390.10 191 265 1.4E-5 T 14-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK01_RS04910 70d154c3b805a9af65b13e851eb76927 356 PIRSF PIRSF012641 1 356 4.4E-159 T 14-09-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase AMK01_RS04910 70d154c3b805a9af65b13e851eb76927 356 Pfam PF10005 zinc-ribbon domain 3 93 1.6E-30 T 14-09-2016 IPR011201 Zinc-ribbon domain, bacteria AMK01_RS04910 70d154c3b805a9af65b13e851eb76927 356 Pfam PF15887 Putative zinc-binding metallo-peptidase 100 347 2.0E-104 T 14-09-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase AMK01_RS04910 70d154c3b805a9af65b13e851eb76927 356 SUPERFAMILY SSF55486 191 265 2.05E-5 T 14-09-2016 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 Gene3D G3DSA:3.30.70.141 1 139 1.2E-51 T 14-09-2016 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 PANTHER PTHR11349 1 139 1.1E-61 T 14-09-2016 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.1E-50 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-09-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.279 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-33 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-33 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-33 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-33 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-33 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 SMART SM00562 3 140 1.1E-74 T 14-09-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS07500 085f038e02eba06046def12cacdc8f22 140 SUPERFAMILY SSF54919 1 139 1.31E-53 T 14-09-2016 AMK01_RS02320 80598859334d89ee543da2488e54ef98 256 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 252 7.9E-77 T 14-09-2016 AMK01_RS02320 80598859334d89ee543da2488e54ef98 256 SUPERFAMILY SSF51621 3 252 2.78E-60 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS02320 80598859334d89ee543da2488e54ef98 256 PANTHER PTHR21631:SF18 1 254 3.9E-61 T 14-09-2016 AMK01_RS02320 80598859334d89ee543da2488e54ef98 256 PANTHER PTHR21631 1 254 3.9E-61 T 14-09-2016 AMK01_RS02320 80598859334d89ee543da2488e54ef98 256 Gene3D G3DSA:3.20.20.60 2 234 2.4E-62 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS01680 6fdcbfc349b4e1769f8b9d50561629fd 149 PANTHER PTHR12418 1 142 1.7E-31 T 14-09-2016 AMK01_RS01680 6fdcbfc349b4e1769f8b9d50561629fd 149 Pfam PF03061 Thioesterase superfamily 52 123 1.6E-9 T 14-09-2016 IPR006683 Thioesterase domain AMK01_RS01680 6fdcbfc349b4e1769f8b9d50561629fd 149 PANTHER PTHR12418:SF28 1 142 1.7E-31 T 14-09-2016 AMK01_RS01680 6fdcbfc349b4e1769f8b9d50561629fd 149 Gene3D G3DSA:3.10.129.10 9 142 1.6E-32 T 14-09-2016 IPR029069 HotDog domain AMK01_RS01680 6fdcbfc349b4e1769f8b9d50561629fd 149 SUPERFAMILY SSF54637 9 140 2.05E-27 T 14-09-2016 IPR029069 HotDog domain AMK01_RS01680 6fdcbfc349b4e1769f8b9d50561629fd 149 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 139 2.7E-14 T 14-09-2016 IPR003736 Phenylacetic acid degradation-related domain AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 189 1.0E-59 T 14-09-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 PIRSF PIRSF000110 1 491 7.1E-175 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 SUPERFAMILY SSF55347 179 488 2.22E-115 T 14-09-2016 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 14-09-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 6.0E-49 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 6.0E-49 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 6.0E-49 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 6.0E-49 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 6.0E-49 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 SUPERFAMILY SSF51735 3 192 8.86E-59 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 11 489 4.1E-181 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 Gene3D G3DSA:3.40.50.720 9 188 2.1E-63 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 PANTHER PTHR23429:SF0 14 490 7.5E-214 T 14-09-2016 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 10 489 88.891 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 Gene3D G3DSA:3.30.360.10 189 488 9.5E-127 T 14-09-2016 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 488 1.2E-118 T 14-09-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS03725 d5f03eceff0f8ace38db764195130e7c 491 PANTHER PTHR23429 14 490 7.5E-214 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 Hamap MF_00219 Dihydroorotase [pyrC]. 2 345 42.871 T 14-09-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 SUPERFAMILY SSF51556 1 344 4.54E-139 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 Pfam PF01979 Amidohydrolase family 11 327 3.6E-16 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 PANTHER PTHR11647 2 315 3.8E-149 T 14-09-2016 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 344 2.0E-126 T 14-09-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 PIRSF PIRSF001237 1 347 1.3E-135 T 14-09-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 PANTHER PTHR11647:SF59 2 315 3.8E-149 T 14-09-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 Gene3D G3DSA:3.20.20.140 2 344 1.4E-124 T 14-09-2016 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 14-09-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02540 54e9b779ab4ab742ff54868104ef6cb3 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-09-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 TIGRFAM TIGR00593 pola: DNA polymerase I 7 999 2.7E-279 T 14-09-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SUPERFAMILY SSF56672 589 999 2.45E-147 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 177 270 6.4E-31 T 14-09-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SMART SM00479 399 583 4.3E-23 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SMART SM00475 5 268 1.3E-130 T 14-09-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Gene3D G3DSA:1.20.1060.10 607 728 3.4E-32 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Gene3D G3DSA:1.10.150.20 192 253 9.9E-26 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SMART SM00279 179 214 1.3E-14 T 14-09-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 ProSitePatterns PS00447 DNA polymerase family A signature. 819 838 - T 14-09-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 808 9.2E-68 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PRINTS PR00868 DNA-polymerase family A (pol I) signature 819 844 9.2E-68 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PRINTS PR00868 DNA-polymerase family A (pol I) signature 765 788 9.2E-68 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PRINTS PR00868 DNA-polymerase family A (pol I) signature 856 867 9.2E-68 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PRINTS PR00868 DNA-polymerase family A (pol I) signature 743 758 9.2E-68 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PRINTS PR00868 DNA-polymerase family A (pol I) signature 910 926 9.2E-68 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PRINTS PR00868 DNA-polymerase family A (pol I) signature 878 889 9.2E-68 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PRINTS PR00868 DNA-polymerase family A (pol I) signature 720 742 9.2E-68 T 14-09-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Gene3D G3DSA:1.10.150.20 777 882 1.0E-32 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Gene3D G3DSA:3.40.50.1010 6 191 1.2E-68 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SMART SM00474 379 582 3.7E-29 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SUPERFAMILY SSF88723 5 176 3.6E-53 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Gene3D G3DSA:3.30.70.370 883 999 4.7E-64 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Gene3D G3DSA:3.30.70.370 729 776 4.7E-64 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SUPERFAMILY SSF53098 375 582 1.97E-48 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Pfam PF01612 3'-5' exonuclease 379 581 1.5E-29 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PANTHER PTHR10133 365 998 0.0 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Gene3D G3DSA:3.30.420.10 378 606 3.7E-74 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SUPERFAMILY SSF47807 177 291 3.29E-32 T 14-09-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PANTHER PTHR10133 5 288 0.0 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PANTHER PTHR10133:SF27 365 998 0.0 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 PANTHER PTHR10133:SF27 5 288 0.0 T 14-09-2016 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 176 4.6E-55 T 14-09-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 SMART SM00482 751 959 5.8E-120 T 14-09-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00910 8b1b81aa92c0866899c7fad12c592bdc 999 Pfam PF00476 DNA polymerase family A 615 997 1.8E-143 T 14-09-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS14235 6e50ec838e59f7b87d04d652b85fd90a 251 SUPERFAMILY SSF51735 1 213 3.38E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14235 6e50ec838e59f7b87d04d652b85fd90a 251 PANTHER PTHR14194 1 244 5.9E-101 T 14-09-2016 AMK01_RS14235 6e50ec838e59f7b87d04d652b85fd90a 251 Pfam PF13460 NAD(P)H-binding 7 173 4.4E-14 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14235 6e50ec838e59f7b87d04d652b85fd90a 251 Gene3D G3DSA:3.40.50.720 1 206 5.8E-31 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14235 6e50ec838e59f7b87d04d652b85fd90a 251 PANTHER PTHR14194:SF69 1 244 5.9E-101 T 14-09-2016 AMK01_RS07950 2068fe00c29cf79e54789e95f7929407 275 PANTHER PTHR11941:SF28 2 272 3.6E-116 T 14-09-2016 AMK01_RS07950 2068fe00c29cf79e54789e95f7929407 275 SUPERFAMILY SSF52096 18 274 7.85E-75 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS07950 2068fe00c29cf79e54789e95f7929407 275 Gene3D G3DSA:3.90.226.10 21 273 1.6E-70 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS07950 2068fe00c29cf79e54789e95f7929407 275 PANTHER PTHR11941 2 272 3.6E-116 T 14-09-2016 AMK01_RS07950 2068fe00c29cf79e54789e95f7929407 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 24 274 9.9E-51 T 14-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK01_RS02835 6a8937a2983584b6a14bcc641b01363c 236 Gene3D G3DSA:2.40.50.90 129 233 4.7E-8 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS02835 6a8937a2983584b6a14bcc641b01363c 236 SUPERFAMILY SSF50199 128 232 4.18E-13 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82866 829 1023 9.55E-43 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 Gene3D G3DSA:1.10.3850.10 811 1024 3.2E-50 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 Gene3D G3DSA:1.10.3850.10 278 497 8.9E-58 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 8.8E-104 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 Gene3D G3DSA:3.30.70.1430 38 138 7.5E-30 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82866 295 496 4.45E-48 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 Pfam PF00873 AcrB/AcrD/AcrF family 1 1023 0.0 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 14-09-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82693 562 668 1.15E-28 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PANTHER PTHR32063:SF13 1 1033 0.0 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 PANTHER PTHR32063 1 1033 0.0 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 Gene3D G3DSA:3.30.2090.10 718 804 1.7E-20 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82693 669 718 1.46E-18 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82693 805 853 1.46E-18 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 Gene3D G3DSA:3.30.70.1430 564 668 2.5E-32 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82693 273 329 1.2E-22 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82693 135 181 1.2E-22 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 Gene3D G3DSA:3.30.2090.10 181 274 1.1E-26 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82714 719 804 2.49E-18 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82693 38 128 3.35E-24 T 14-09-2016 AMK01_RS17620 8d5bf51ed7cee0e19481f10fe5321734 1036 SUPERFAMILY SSF82714 181 271 7.72E-22 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 Gene3D G3DSA:3.40.640.10 59 305 3.8E-81 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 Pfam PF00202 Aminotransferase class-III 16 398 1.7E-121 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 PANTHER PTHR11986 1 398 2.1E-225 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 PANTHER PTHR11986:SF18 1 398 2.1E-225 T 14-09-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 SUPERFAMILY SSF53383 3 398 3.52E-121 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 Gene3D G3DSA:3.90.1150.10 308 398 7.6E-43 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 Gene3D G3DSA:3.90.1150.10 2 58 7.6E-43 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 399 37.15 T 14-09-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMK01_RS19805 1b0aa42c54e62e09a33d37382775c952 399 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 4 398 2.5E-168 T 14-09-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS29635 12f649d1bb94f28ed8099de6d8bfd27f 114 Gene3D G3DSA:3.30.565.10 6 101 6.5E-15 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS29635 12f649d1bb94f28ed8099de6d8bfd27f 114 PANTHER PTHR24423:SF554 2 104 1.3E-24 T 14-09-2016 AMK01_RS29635 12f649d1bb94f28ed8099de6d8bfd27f 114 PANTHER PTHR24423 2 104 1.3E-24 T 14-09-2016 AMK01_RS29635 12f649d1bb94f28ed8099de6d8bfd27f 114 SUPERFAMILY SSF55874 2 108 7.02E-16 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS16470 cb313a4c0c68f186a0a4b4eb0fa051bc 291 PANTHER PTHR24220:SF575 50 291 1.5E-111 T 14-09-2016 AMK01_RS16470 cb313a4c0c68f186a0a4b4eb0fa051bc 291 PANTHER PTHR24220 50 291 1.5E-111 T 14-09-2016 AMK01_RS16470 cb313a4c0c68f186a0a4b4eb0fa051bc 291 ProSitePatterns PS00211 ABC transporters family signature. 189 203 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS16470 cb313a4c0c68f186a0a4b4eb0fa051bc 291 SMART SM00382 73 265 2.5E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16470 cb313a4c0c68f186a0a4b4eb0fa051bc 291 Gene3D G3DSA:3.40.50.300 48 272 4.8E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16470 cb313a4c0c68f186a0a4b4eb0fa051bc 291 Pfam PF00005 ABC transporter 65 217 7.7E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16470 cb313a4c0c68f186a0a4b4eb0fa051bc 291 SUPERFAMILY SSF52540 48 272 1.6E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13560 5a01e0d5c80e0d98b70cef8f4a41dff4 103 SUPERFAMILY SSF50022 1 102 1.22E-27 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS13560 5a01e0d5c80e0d98b70cef8f4a41dff4 103 Gene3D G3DSA:2.102.10.10 1 102 1.6E-25 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS13560 5a01e0d5c80e0d98b70cef8f4a41dff4 103 Pfam PF00355 Rieske [2Fe-2S] domain 2 90 7.4E-18 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS13560 5a01e0d5c80e0d98b70cef8f4a41dff4 103 PANTHER PTHR21496 1 102 1.2E-15 T 14-09-2016 AMK01_RS13560 5a01e0d5c80e0d98b70cef8f4a41dff4 103 PANTHER PTHR21496:SF11 1 102 1.2E-15 T 14-09-2016 AMK01_RS13560 5a01e0d5c80e0d98b70cef8f4a41dff4 103 TIGRFAM TIGR02377 MocE_fam_FeS: Rieske [2Fe-2S] domain protein, MocE subfamily 2 102 9.5E-56 T 14-09-2016 IPR012747 MocE Rieske [2Fe-2S] AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 SUPERFAMILY SSF52540 12 195 7.87E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 PANTHER PTHR23117 15 190 4.5E-40 T 14-09-2016 AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 Gene3D G3DSA:3.40.50.300 87 171 1.2E-14 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 15 191 1.6E-67 T 14-09-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 Gene3D G3DSA:3.40.50.300 10 77 0.001 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 PANTHER PTHR23117:SF8 15 190 4.5E-40 T 14-09-2016 AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 Pfam PF13238 AAA domain 18 151 2.8E-7 T 14-09-2016 AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 SMART SM00072 14 194 2.6E-4 T 14-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMK01_RS00925 eccc5f84ea010ed5adc769f064cf0dbe 198 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 14 191 35.161 T 14-09-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS02200 0226fa72eccdf4ec51dd09a59f3dd58e 316 Pfam PF01343 Peptidase family S49 105 250 6.5E-39 T 14-09-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK01_RS02200 0226fa72eccdf4ec51dd09a59f3dd58e 316 SUPERFAMILY SSF52096 35 151 2.08E-37 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS02200 0226fa72eccdf4ec51dd09a59f3dd58e 316 SUPERFAMILY SSF52096 180 240 2.08E-37 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS02200 0226fa72eccdf4ec51dd09a59f3dd58e 316 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 48 245 3.5E-60 T 14-09-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AMK01_RS02200 0226fa72eccdf4ec51dd09a59f3dd58e 316 PANTHER PTHR33209 45 289 9.4E-62 T 14-09-2016 AMK01_RS02200 0226fa72eccdf4ec51dd09a59f3dd58e 316 PANTHER PTHR33209 4 23 9.4E-62 T 14-09-2016 AMK01_RS02200 0226fa72eccdf4ec51dd09a59f3dd58e 316 Gene3D G3DSA:3.90.226.10 27 143 3.2E-37 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS02200 0226fa72eccdf4ec51dd09a59f3dd58e 316 Gene3D G3DSA:3.90.226.10 181 251 3.2E-37 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS16070 5932440637fe56eab8e4ea5cf4eabcf3 469 PANTHER PTHR34595:SF3 2 469 1.3E-265 T 14-09-2016 AMK01_RS16070 5932440637fe56eab8e4ea5cf4eabcf3 469 PANTHER PTHR34595 2 469 1.3E-265 T 14-09-2016 AMK01_RS16070 5932440637fe56eab8e4ea5cf4eabcf3 469 PIRSF PIRSF005522 1 469 3.7E-221 T 14-09-2016 IPR016450 Uncharacterised conserved protein UCP005522 AMK01_RS16070 5932440637fe56eab8e4ea5cf4eabcf3 469 SUPERFAMILY SSF56059 315 460 1.11E-67 T 14-09-2016 AMK01_RS16070 5932440637fe56eab8e4ea5cf4eabcf3 469 SUPERFAMILY SSF56059 13 207 1.11E-67 T 14-09-2016 AMK01_RS16070 5932440637fe56eab8e4ea5cf4eabcf3 469 Pfam PF14403 Circularly permuted ATP-grasp type 2 69 445 1.9E-160 T 14-09-2016 IPR025841 Circularly permuted ATP-grasp type 2 AMK01_RS09725 c2d555da6442d5c8efeb70b9436be340 375 Gene3D G3DSA:2.30.42.10 112 213 2.0E-25 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS09725 c2d555da6442d5c8efeb70b9436be340 375 SMART SM00228 138 203 7.5E-7 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS09725 c2d555da6442d5c8efeb70b9436be340 375 SUPERFAMILY SSF50156 118 210 7.49E-18 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS09725 c2d555da6442d5c8efeb70b9436be340 375 PANTHER PTHR22939 148 375 7.2E-63 T 14-09-2016 AMK01_RS09725 c2d555da6442d5c8efeb70b9436be340 375 Pfam PF02163 Peptidase family M50 17 363 6.9E-82 T 14-09-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 AMK01_RS09725 c2d555da6442d5c8efeb70b9436be340 375 Pfam PF13180 PDZ domain 148 209 1.6E-10 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS09725 c2d555da6442d5c8efeb70b9436be340 375 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 145 373 6.8E-50 T 14-09-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AMK01_RS09725 c2d555da6442d5c8efeb70b9436be340 375 PANTHER PTHR22939:SF78 148 375 7.2E-63 T 14-09-2016 AMK01_RS15095 4d70c15fea9e04942fc380874c1d205e 115 SUPERFAMILY SSF51316 1 110 4.81E-29 T 14-09-2016 IPR011057 Mss4-like AMK01_RS15095 4d70c15fea9e04942fc380874c1d205e 115 PANTHER PTHR28620 1 115 7.9E-31 T 14-09-2016 AMK01_RS15095 4d70c15fea9e04942fc380874c1d205e 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 83 7.1E-8 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS15095 4d70c15fea9e04942fc380874c1d205e 115 Gene3D G3DSA:3.90.1590.10 3 83 1.1E-19 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS15095 4d70c15fea9e04942fc380874c1d205e 115 PANTHER PTHR28620:SF2 1 115 7.9E-31 T 14-09-2016 AMK01_RS07125 2162e62dd7c26e376e24695a20654041 283 PANTHER PTHR14237:SF30 1 274 5.4E-66 T 14-09-2016 AMK01_RS07125 2162e62dd7c26e376e24695a20654041 283 Pfam PF03476 MOSC N-terminal beta barrel domain 2 113 1.8E-18 T 14-09-2016 IPR005303 MOSC, N-terminal beta barrel AMK01_RS07125 2162e62dd7c26e376e24695a20654041 283 PANTHER PTHR14237 1 274 5.4E-66 T 14-09-2016 AMK01_RS07125 2162e62dd7c26e376e24695a20654041 283 Pfam PF03473 MOSC domain 139 268 2.7E-26 T 14-09-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMK01_RS07125 2162e62dd7c26e376e24695a20654041 283 SUPERFAMILY SSF50800 151 270 2.09E-16 T 14-09-2016 IPR011037 Pyruvate kinase-like, insert domain AMK01_RS07125 2162e62dd7c26e376e24695a20654041 283 SUPERFAMILY SSF50800 2 49 2.09E-16 T 14-09-2016 IPR011037 Pyruvate kinase-like, insert domain AMK01_RS07125 2162e62dd7c26e376e24695a20654041 283 SUPERFAMILY SSF141673 3 128 1.57E-26 T 14-09-2016 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 2.9E-18 T 14-09-2016 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 142 157 2.9E-18 T 14-09-2016 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 2.9E-18 T 14-09-2016 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.9E-18 T 14-09-2016 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 Pfam PF01494 FAD binding domain 143 335 3.3E-13 T 14-09-2016 IPR002938 FAD-binding domain GO:0071949 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 SUPERFAMILY SSF54373 167 267 7.85E-8 T 14-09-2016 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 Gene3D G3DSA:3.50.50.60 6 169 1.1E-33 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 Gene3D G3DSA:3.50.50.60 264 337 1.1E-33 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 38 2.1E-6 T 14-09-2016 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 SUPERFAMILY SSF51905 6 163 2.37E-47 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 SUPERFAMILY SSF51905 263 352 2.37E-47 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 PANTHER PTHR13789:SF212 8 382 1.1E-65 T 14-09-2016 AMK01_RS09610 d841e21f9209ec6043bf6cf58bf80ebf 384 PANTHER PTHR13789 8 382 1.1E-65 T 14-09-2016 AMK01_RS10490 1399732bef4acc50d036a6a083ed6bb0 366 Gene3D G3DSA:3.30.360.10 142 346 6.4E-30 T 14-09-2016 AMK01_RS10490 1399732bef4acc50d036a6a083ed6bb0 366 SUPERFAMILY SSF51735 3 152 4.5E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10490 1399732bef4acc50d036a6a083ed6bb0 366 Gene3D G3DSA:3.40.50.720 1 141 2.8E-31 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10490 1399732bef4acc50d036a6a083ed6bb0 366 PANTHER PTHR22604:SF105 1 355 3.0E-72 T 14-09-2016 AMK01_RS10490 1399732bef4acc50d036a6a083ed6bb0 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 117 1.4E-17 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS10490 1399732bef4acc50d036a6a083ed6bb0 366 PANTHER PTHR22604 1 355 3.0E-72 T 14-09-2016 AMK01_RS10490 1399732bef4acc50d036a6a083ed6bb0 366 SUPERFAMILY SSF55347 129 294 2.29E-31 T 14-09-2016 AMK01_RS24975 1127e88068d4d2475e4902e451be07cd 250 Gene3D G3DSA:3.90.550.10 44 236 1.4E-9 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS24975 1127e88068d4d2475e4902e451be07cd 250 PANTHER PTHR10587:SF71 40 158 8.2E-18 T 14-09-2016 AMK01_RS24975 1127e88068d4d2475e4902e451be07cd 250 PANTHER PTHR10587 40 158 8.2E-18 T 14-09-2016 AMK01_RS24975 1127e88068d4d2475e4902e451be07cd 250 SUPERFAMILY SSF53448 40 246 2.16E-29 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS24975 1127e88068d4d2475e4902e451be07cd 250 Pfam PF13506 Glycosyl transferase family 21 95 247 1.5E-25 T 14-09-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 AMK01_RS04655 881400a703d2e6f2f80c69f16cb41584 658 Gene3D G3DSA:3.30.870.10 511 613 7.9E-17 T 14-09-2016 AMK01_RS04655 881400a703d2e6f2f80c69f16cb41584 658 Gene3D G3DSA:3.30.870.10 238 375 3.7E-11 T 14-09-2016 AMK01_RS04655 881400a703d2e6f2f80c69f16cb41584 658 SUPERFAMILY SSF56024 549 611 2.47E-7 T 14-09-2016 AMK01_RS04655 881400a703d2e6f2f80c69f16cb41584 658 Pfam PF13091 PLD-like domain 537 599 5.0E-7 T 14-09-2016 IPR025202 Phospholipase D-like domain AMK01_RS04655 881400a703d2e6f2f80c69f16cb41584 658 Pfam PF13091 PLD-like domain 251 371 4.2E-11 T 14-09-2016 IPR025202 Phospholipase D-like domain AMK01_RS04655 881400a703d2e6f2f80c69f16cb41584 658 SUPERFAMILY SSF56024 239 375 1.05E-8 T 14-09-2016 AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 Gene3D G3DSA:3.40.190.10 178 258 5.5E-9 T 14-09-2016 AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 SUPERFAMILY SSF46785 8 111 7.69E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 Gene3D G3DSA:3.40.190.10 91 177 2.3E-24 T 14-09-2016 AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 PANTHER PTHR30537 1 292 2.6E-110 T 14-09-2016 AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 Pfam PF03466 LysR substrate binding domain 87 290 6.0E-47 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 8.4E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 SUPERFAMILY SSF53850 89 292 8.53E-48 T 14-09-2016 AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 PANTHER PTHR30537:SF13 1 292 2.6E-110 T 14-09-2016 AMK01_RS06235 bb19bc6c24830b2fe611afaa65b60bf9 293 Gene3D G3DSA:1.10.10.10 8 84 7.7E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03610 42a2f66f70103a6d22ca5da7d4456d9b 348 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 142 4.1E-34 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03610 42a2f66f70103a6d22ca5da7d4456d9b 348 Pfam PF00700 Bacterial flagellin C-terminal helical region 266 348 6.6E-25 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03610 42a2f66f70103a6d22ca5da7d4456d9b 348 SUPERFAMILY SSF64518 5 348 6.02E-21 T 14-09-2016 AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 SUPERFAMILY SSF50129 1 169 8.98E-56 T 14-09-2016 IPR011032 GroES-like AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 Gene3D G3DSA:3.90.180.10 1 162 3.6E-57 T 14-09-2016 IPR011032 GroES-like AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 128 4.2E-36 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 SUPERFAMILY SSF51735 134 306 4.21E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 SMART SM00829 10 337 1.8E-5 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 Gene3D G3DSA:3.40.50.720 163 284 2.9E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 Pfam PF00107 Zinc-binding dehydrogenase 171 289 5.5E-24 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 PANTHER PTHR11695:SF429 12 342 1.7E-103 T 14-09-2016 AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 PANTHER PTHR11695 12 342 1.7E-103 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS15165 214717b78961f10eba2988d5e9323c51 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 14-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK01_RS18665 a51c6989bc7f96497517a35c790a7b18 179 PANTHER PTHR35011:SF4 4 179 7.0E-66 T 14-09-2016 AMK01_RS18665 a51c6989bc7f96497517a35c790a7b18 179 PANTHER PTHR35011 4 179 7.0E-66 T 14-09-2016 AMK01_RS18665 a51c6989bc7f96497517a35c790a7b18 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 7.0E-28 T 14-09-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AMK01_RS13655 f5b399716262470b6f0f7b413278920d 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 282 3.8E-12 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13655 f5b399716262470b6f0f7b413278920d 294 SUPERFAMILY SSF161098 55 279 2.75E-44 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13655 f5b399716262470b6f0f7b413278920d 294 Gene3D G3DSA:1.10.3720.10 61 288 1.0E-48 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13655 f5b399716262470b6f0f7b413278920d 294 PANTHER PTHR30406 1 294 2.6E-60 T 14-09-2016 AMK01_RS13655 f5b399716262470b6f0f7b413278920d 294 PANTHER PTHR30406:SF2 1 294 2.6E-60 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.1E-32 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 2.1E-32 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 2.1E-32 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 2.1E-32 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 2.1E-32 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 Gene3D G3DSA:3.50.50.60 150 272 6.2E-32 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 4 449 4.2E-220 T 14-09-2016 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 Gene3D G3DSA:3.50.50.60 4 145 5.5E-66 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 Gene3D G3DSA:3.50.50.60 273 329 5.5E-66 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PIRSF PIRSF000350 1 450 3.0E-77 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PANTHER PTHR22912:SF106 2 452 1.0E-181 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 320 1.5E-62 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 SUPERFAMILY SSF51905 2 364 2.81E-54 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 SUPERFAMILY SSF55424 336 452 1.39E-32 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PANTHER PTHR22912 2 452 1.0E-181 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 4.6E-31 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 Gene3D G3DSA:3.30.390.30 340 452 1.9E-38 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 3.3E-67 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 3.3E-67 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 3.3E-67 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 3.3E-67 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 3.3E-67 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 3.3E-67 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.3E-67 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 3.3E-67 T 14-09-2016 AMK01_RS12130 ae0fce5d2ae3c6731334dd8c1e6883ea 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 3.3E-67 T 14-09-2016 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 19 316 35.336 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 PANTHER PTHR11265:SF0 17 318 1.9E-132 T 14-09-2016 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 Pfam PF01795 MraW methylase family 17 314 2.9E-94 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 18 315 1.3E-89 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 SUPERFAMILY SSF81799 122 221 1.96E-32 T 14-09-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 SUPERFAMILY SSF53335 19 121 2.54E-47 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 SUPERFAMILY SSF53335 221 315 2.54E-47 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 PIRSF PIRSF004486 16 317 3.0E-98 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 Gene3D G3DSA:1.10.150.170 120 223 2.5E-33 T 14-09-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 PANTHER PTHR11265 17 318 1.9E-132 T 14-09-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 Gene3D G3DSA:3.40.50.150 19 118 1.6E-47 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14655 157f3e2d02bea0af150db05815417ff5 341 Gene3D G3DSA:3.40.50.150 224 317 1.6E-47 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS08565 b179c82fded2e57a5482c537e3cb86e5 129 PIRSF PIRSF002131 1 129 1.7E-52 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08565 b179c82fded2e57a5482c537e3cb86e5 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 33.539 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08565 b179c82fded2e57a5482c537e3cb86e5 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-09-2016 IPR018102 Ribosomal S11, conserved site AMK01_RS08565 b179c82fded2e57a5482c537e3cb86e5 129 SUPERFAMILY SSF53137 14 129 2.71E-49 T 14-09-2016 AMK01_RS08565 b179c82fded2e57a5482c537e3cb86e5 129 Gene3D G3DSA:3.30.420.80 7 129 1.6E-56 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08565 b179c82fded2e57a5482c537e3cb86e5 129 PANTHER PTHR11759 10 129 8.2E-72 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08565 b179c82fded2e57a5482c537e3cb86e5 129 Pfam PF00411 Ribosomal protein S11 19 128 9.7E-51 T 14-09-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08565 b179c82fded2e57a5482c537e3cb86e5 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.2E-57 T 14-09-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS13860 80dfb1b4e4cd300efa22d073286bc626 235 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 146 212 6.9E-10 T 14-09-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 AMK01_RS13860 80dfb1b4e4cd300efa22d073286bc626 235 PANTHER PTHR12714:SF2 27 235 1.5E-45 T 14-09-2016 AMK01_RS13860 80dfb1b4e4cd300efa22d073286bc626 235 PANTHER PTHR12714 27 235 1.5E-45 T 14-09-2016 AMK01_RS05745 7e4f57ecd77754974696f7fc8b2d2acb 367 PANTHER PTHR30244 1 362 3.6E-161 T 14-09-2016 AMK01_RS05745 7e4f57ecd77754974696f7fc8b2d2acb 367 PIRSF PIRSF000390 1 367 1.1E-99 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS05745 7e4f57ecd77754974696f7fc8b2d2acb 367 SUPERFAMILY SSF53383 3 366 4.72E-92 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS05745 7e4f57ecd77754974696f7fc8b2d2acb 367 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 18 362 1.3E-86 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS05745 7e4f57ecd77754974696f7fc8b2d2acb 367 Gene3D G3DSA:3.40.640.10 1 239 9.8E-65 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS05745 7e4f57ecd77754974696f7fc8b2d2acb 367 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 363 1.0E-189 T 14-09-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 AMK01_RS05745 7e4f57ecd77754974696f7fc8b2d2acb 367 PANTHER PTHR30244:SF14 1 362 3.6E-161 T 14-09-2016 AMK01_RS05745 7e4f57ecd77754974696f7fc8b2d2acb 367 Gene3D G3DSA:3.90.1150.10 242 366 3.4E-25 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS19495 8d404272adfd286677f1cec450d305ff 249 PANTHER PTHR21294 1 249 6.6E-156 T 14-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 AMK01_RS19495 8d404272adfd286677f1cec450d305ff 249 PIRSF PIRSF000090 1 249 1.3E-87 T 14-09-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 AMK01_RS19495 8d404272adfd286677f1cec450d305ff 249 Gene3D G3DSA:3.40.50.620 1 246 1.4E-107 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS19495 8d404272adfd286677f1cec450d305ff 249 SMART SM00893 23 211 2.9E-70 T 14-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMK01_RS19495 8d404272adfd286677f1cec450d305ff 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-09-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 AMK01_RS19495 8d404272adfd286677f1cec450d305ff 249 Pfam PF01012 Electron transfer flavoprotein domain 29 205 4.3E-47 T 14-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMK01_RS19495 8d404272adfd286677f1cec450d305ff 249 SUPERFAMILY SSF52402 1 242 3.91E-88 T 14-09-2016 AMK01_RS19495 8d404272adfd286677f1cec450d305ff 249 PANTHER PTHR21294:SF8 1 249 6.6E-156 T 14-09-2016 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 Pfam PF00035 Double-stranded RNA binding motif 163 227 1.8E-13 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 ProSitePatterns PS00517 Ribonuclease III family signature. 47 55 - T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 Gene3D G3DSA:3.30.160.20 162 228 2.4E-21 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 Pfam PF14622 Ribonuclease-III-like 29 148 5.4E-29 T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 Gene3D G3DSA:1.10.1520.10 13 150 3.2E-39 T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 SMART SM00358 163 230 1.5E-18 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 Hamap MF_00104 Ribonuclease 3 [rnc]. 15 226 25.449 T 14-09-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 SMART SM00535 27 158 1.8E-37 T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 PANTHER PTHR11207 13 228 1.1E-59 T 14-09-2016 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 16 228 2.6E-66 T 14-09-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 SUPERFAMILY SSF69065 11 164 1.12E-42 T 14-09-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK01_RS07095 0d7d5da687e887d57e7426a87c7e798b 239 SUPERFAMILY SSF54768 119 234 1.89E-25 T 14-09-2016 AMK01_RS04975 23f79413425a1598ca329893fedb0da7 431 Gene3D G3DSA:3.30.830.10 12 224 1.7E-64 T 14-09-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK01_RS04975 23f79413425a1598ca329893fedb0da7 431 Pfam PF00675 Insulinase (Peptidase family M16) 14 160 1.1E-48 T 14-09-2016 IPR011765 Peptidase M16, N-terminal AMK01_RS04975 23f79413425a1598ca329893fedb0da7 431 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 14-09-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMK01_RS04975 23f79413425a1598ca329893fedb0da7 431 Pfam PF05193 Peptidase M16 inactive domain 166 339 3.0E-38 T 14-09-2016 IPR007863 Peptidase M16, C-terminal AMK01_RS04975 23f79413425a1598ca329893fedb0da7 431 PANTHER PTHR11851 3 419 4.3E-139 T 14-09-2016 AMK01_RS04975 23f79413425a1598ca329893fedb0da7 431 SUPERFAMILY SSF63411 3 217 2.79E-61 T 14-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK01_RS04975 23f79413425a1598ca329893fedb0da7 431 Gene3D G3DSA:3.30.830.10 225 414 1.7E-59 T 14-09-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK01_RS04975 23f79413425a1598ca329893fedb0da7 431 SUPERFAMILY SSF63411 224 411 1.0E-44 T 14-09-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 SUPERFAMILY SSF47384 231 309 1.9E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 SMART SM00448 627 746 2.4E-24 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 306 8.1E-21 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 463 3.4E-27 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 SMART SM00387 355 465 7.1E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 PANTHER PTHR24423 124 468 4.5E-117 T 14-09-2016 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 PANTHER PTHR24423 567 585 4.5E-117 T 14-09-2016 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 PANTHER PTHR24423 626 759 4.5E-117 T 14-09-2016 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 SUPERFAMILY SSF55874 297 464 6.55E-44 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 Gene3D G3DSA:3.30.565.10 309 470 5.3E-45 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 Pfam PF00072 Response regulator receiver domain 629 746 1.1E-18 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 SMART SM00388 243 308 4.7E-22 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 SUPERFAMILY SSF52172 625 753 9.96E-28 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 7.4E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 7.4E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 7.4E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 Gene3D G3DSA:1.10.287.130 236 303 3.0E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02155 9a00fa6e90dd6be1bfe56663b2f8122f 760 Gene3D G3DSA:3.40.50.2300 625 756 1.5E-29 T 14-09-2016 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 SUPERFAMILY SSF47323 692 963 2.62E-57 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 SUPERFAMILY SSF50677 217 438 3.56E-40 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 Gene3D G3DSA:3.40.50.620 441 676 6.7E-131 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 Gene3D G3DSA:3.40.50.620 19 214 6.7E-131 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 Gene3D G3DSA:3.90.740.10 220 424 3.7E-44 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 8 962 19.436 T 14-09-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 21 873 8.4E-239 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PANTHER PTHR11946 297 956 0.0 T 14-09-2016 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PANTHER PTHR11946 12 264 0.0 T 14-09-2016 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 64 75 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 Pfam PF08264 Anticodon-binding domain of tRNA 724 872 5.4E-22 T 14-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 34 680 1.4E-178 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PANTHER PTHR11946:SF11 297 956 0.0 T 14-09-2016 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PANTHER PTHR11946:SF11 12 264 0.0 T 14-09-2016 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 580 2.3E-29 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 57 68 2.3E-29 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 601 610 2.3E-29 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 436 451 2.3E-29 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 243 266 2.3E-29 T 14-09-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 SUPERFAMILY SSF52374 8 216 5.22E-127 T 14-09-2016 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 SUPERFAMILY SSF52374 438 686 5.22E-127 T 14-09-2016 AMK01_RS04250 c2ce840999c8af06a1237a39eb09584e 968 Gene3D G3DSA:1.10.730.10 683 859 8.6E-36 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS16965 bdba08cfad29e6650a2783729cbcc799 203 PIRSF PIRSF005624 1 202 1.6E-49 T 14-09-2016 AMK01_RS16965 bdba08cfad29e6650a2783729cbcc799 203 SUPERFAMILY SSF52540 4 199 1.68E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16965 bdba08cfad29e6650a2783729cbcc799 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 180 4.0E-37 T 14-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS16965 bdba08cfad29e6650a2783729cbcc799 203 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 199 7.8E-99 T 14-09-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AMK01_RS16965 bdba08cfad29e6650a2783729cbcc799 203 PANTHER PTHR31715 7 200 1.5E-115 T 14-09-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AMK01_RS16965 bdba08cfad29e6650a2783729cbcc799 203 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 203 46.009 T 14-09-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AMK01_RS16965 bdba08cfad29e6650a2783729cbcc799 203 Gene3D G3DSA:3.40.50.300 8 197 6.1E-21 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02520 8ff86204686bbc183a7bb5c6c7fcd2d4 339 SUPERFAMILY SSF53822 24 323 2.54E-62 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS02520 8ff86204686bbc183a7bb5c6c7fcd2d4 339 Gene3D G3DSA:3.40.50.2300 145 322 3.1E-41 T 14-09-2016 AMK01_RS02520 8ff86204686bbc183a7bb5c6c7fcd2d4 339 Pfam PF13407 Periplasmic binding protein domain 30 299 1.9E-43 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS02520 8ff86204686bbc183a7bb5c6c7fcd2d4 339 PANTHER PTHR32196 30 304 8.3E-33 T 14-09-2016 AMK01_RS02520 8ff86204686bbc183a7bb5c6c7fcd2d4 339 PANTHER PTHR32196:SF9 30 304 8.3E-33 T 14-09-2016 AMK01_RS02520 8ff86204686bbc183a7bb5c6c7fcd2d4 339 Gene3D G3DSA:3.40.50.2300 25 144 3.3E-36 T 14-09-2016 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 2.6E-19 T 14-09-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 SUPERFAMILY SSF56349 9 301 3.53E-52 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 Gene3D G3DSA:1.10.443.10 115 302 9.4E-49 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 309 28.554 T 14-09-2016 IPR023009 Tyrosine recombinase XerC/XerD AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 309 58.502 T 14-09-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 309 4.8E-101 T 14-09-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 Pfam PF00589 Phage integrase family 116 295 6.3E-40 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 PANTHER PTHR30349 8 311 1.7E-95 T 14-09-2016 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 PANTHER PTHR30349:SF5 8 311 1.7E-95 T 14-09-2016 AMK01_RS19675 a810dd46c3eef2e2ce5c46541d4385ab 316 Gene3D G3DSA:1.10.150.130 8 97 5.3E-29 T 14-09-2016 IPR023109 Integrase/recombinase, N-terminal AMK01_RS18965 83b632ed623f27e8bca55e3c73ef98fa 327 Gene3D G3DSA:3.40.50.1360 64 326 3.5E-78 T 14-09-2016 AMK01_RS18965 83b632ed623f27e8bca55e3c73ef98fa 327 PANTHER PTHR34294 20 327 2.7E-73 T 14-09-2016 AMK01_RS18965 83b632ed623f27e8bca55e3c73ef98fa 327 Pfam PF13384 Homeodomain-like domain 18 51 1.1E-6 T 14-09-2016 AMK01_RS18965 83b632ed623f27e8bca55e3c73ef98fa 327 Pfam PF04198 Putative sugar-binding domain 68 321 2.1E-62 T 14-09-2016 IPR007324 Sugar-binding domain, putative GO:0030246 AMK01_RS18965 83b632ed623f27e8bca55e3c73ef98fa 327 SUPERFAMILY SSF100950 67 324 8.37E-66 T 14-09-2016 AMK01_RS18965 83b632ed623f27e8bca55e3c73ef98fa 327 Gene3D G3DSA:1.10.10.10 24 53 3.8E-4 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18965 83b632ed623f27e8bca55e3c73ef98fa 327 SUPERFAMILY SSF88659 24 56 2.49E-5 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 Pfam PF04542 Sigma-70 region 2 47 110 4.9E-8 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 Pfam PF08281 Sigma-70, region 4 140 191 4.4E-15 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 192 2.8E-18 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 SUPERFAMILY SSF88659 135 191 8.07E-15 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 SUPERFAMILY SSF88946 45 117 5.1E-13 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 Gene3D G3DSA:1.10.1740.10 38 112 2.1E-14 T 14-09-2016 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 PANTHER PTHR30173 15 191 9.0E-28 T 14-09-2016 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 PANTHER PTHR30173:SF6 15 191 9.0E-28 T 14-09-2016 AMK01_RS03905 c1c10eec4deab1c290152f5869d3edc6 201 Gene3D G3DSA:1.10.10.10 136 191 6.7E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS29920 b68ddd1672584d57014902e9776e3a59 300 PANTHER PTHR11070 1 297 6.5E-117 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS29920 b68ddd1672584d57014902e9776e3a59 300 PANTHER PTHR11070:SF3 1 297 6.5E-117 T 14-09-2016 AMK01_RS29920 b68ddd1672584d57014902e9776e3a59 300 Gene3D G3DSA:3.40.50.300 6 113 4.4E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS29920 b68ddd1672584d57014902e9776e3a59 300 Gene3D G3DSA:3.40.50.300 263 295 4.4E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS29920 b68ddd1672584d57014902e9776e3a59 300 Pfam PF13361 UvrD-like helicase C-terminal domain 3 150 6.3E-23 T 14-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK01_RS29920 b68ddd1672584d57014902e9776e3a59 300 Gene3D G3DSA:1.10.486.10 114 241 1.8E-10 T 14-09-2016 AMK01_RS29920 b68ddd1672584d57014902e9776e3a59 300 SUPERFAMILY SSF52540 18 296 9.3E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 PANTHER PTHR30146 19 328 4.2E-47 T 14-09-2016 AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 21 66 2.7E-10 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 Gene3D G3DSA:1.10.260.40 20 71 6.0E-18 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 SMART SM00354 19 89 4.8E-15 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 Pfam PF13377 Periplasmic binding protein-like domain 188 330 2.7E-13 T 14-09-2016 AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 SUPERFAMILY SSF53822 76 332 2.78E-30 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 Gene3D G3DSA:3.40.50.2300 72 192 5.4E-21 T 14-09-2016 AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 Gene3D G3DSA:3.40.50.2300 193 328 5.7E-21 T 14-09-2016 AMK01_RS12590 98c4002c420ba72c5eb1d631b651b560 347 SUPERFAMILY SSF47413 19 78 2.44E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS16765 2f9169358f9b242951d4437a2bb233d0 337 Gene3D G3DSA:2.40.50.100 48 81 2.0E-14 T 14-09-2016 AMK01_RS16765 2f9169358f9b242951d4437a2bb233d0 337 Gene3D G3DSA:2.40.50.100 208 239 2.0E-14 T 14-09-2016 AMK01_RS16765 2f9169358f9b242951d4437a2bb233d0 337 PANTHER PTHR32347:SF12 1 331 1.9E-71 T 14-09-2016 AMK01_RS16765 2f9169358f9b242951d4437a2bb233d0 337 SUPERFAMILY SSF111369 46 106 2.35E-7 T 14-09-2016 AMK01_RS16765 2f9169358f9b242951d4437a2bb233d0 337 PANTHER PTHR32347 1 331 1.9E-71 T 14-09-2016 AMK01_RS16765 2f9169358f9b242951d4437a2bb233d0 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 291 9.6E-19 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS16765 2f9169358f9b242951d4437a2bb233d0 337 SUPERFAMILY SSF111369 183 329 2.09E-10 T 14-09-2016 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.5E-44 T 14-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 Gene3D G3DSA:2.40.50.100 594 668 1.4E-20 T 14-09-2016 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 PANTHER PTHR18866:SF92 509 668 0.0 T 14-09-2016 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 Pfam PF00364 Biotin-requiring enzyme 605 667 1.1E-12 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.0E-81 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 SUPERFAMILY SSF56059 83 348 4.24E-70 T 14-09-2016 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 PANTHER PTHR18866:SF92 1 488 0.0 T 14-09-2016 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 PANTHER PTHR18866 1 488 0.0 T 14-09-2016 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 SUPERFAMILY SSF51246 331 450 8.89E-39 T 14-09-2016 IPR011054 Rudiment single hybrid motif AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 PANTHER PTHR18866 509 668 0.0 T 14-09-2016 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 Gene3D G3DSA:3.40.50.20 1 129 2.5E-50 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 SUPERFAMILY SSF51230 590 668 7.46E-18 T 14-09-2016 IPR011053 Single hybrid motif AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 Pfam PF02785 Biotin carboxylase C-terminal domain 336 447 1.5E-34 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 Gene3D G3DSA:3.30.1490.20 130 202 3.5E-31 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 SUPERFAMILY SSF52440 1 113 3.38E-47 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 625 642 - T 14-09-2016 IPR001882 Biotin-binding site AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 SMART SM00878 336 447 4.7E-55 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AMK01_RS11410 8b52eaa884d09708fde4f164b9d8d1ce 669 Gene3D G3DSA:3.30.470.20 205 450 1.4E-97 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 Gene3D G3DSA:1.10.10.60 2 60 1.7E-19 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.7E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.7E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.3E-14 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 PANTHER PTHR30328:SF18 10 186 1.3E-29 T 14-09-2016 AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 SUPERFAMILY SSF48498 79 186 2.58E-22 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 PANTHER PTHR30328 10 186 1.3E-29 T 14-09-2016 AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 SUPERFAMILY SSF46689 2 77 4.31E-18 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS19410 f7c584ba174cb360ad1192548ae42f86 192 Gene3D G3DSA:1.10.357.10 61 186 1.5E-27 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 Gene3D G3DSA:2.40.50.140 1 67 8.0E-27 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 5.1E-25 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 PIRSF PIRSF002599 1 69 4.0E-21 T 14-09-2016 IPR012156 Cold shock, CspA GO:0003676 AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 SMART SM00357 3 69 1.2E-25 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 PANTHER PTHR11544 1 53 5.3E-21 T 14-09-2016 AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-09-2016 IPR019844 Cold-shock conserved site AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 SUPERFAMILY SSF50249 1 67 1.39E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 PRINTS PR00050 Cold shock protein signature 25 34 3.1E-13 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 PRINTS PR00050 Cold shock protein signature 4 19 3.1E-13 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS06020 78c1baa30c5fd9ef45e982af647dd8fc 69 PRINTS PR00050 Cold shock protein signature 40 58 3.1E-13 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 66 8.4E-20 T 14-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 336 37.179 T 14-09-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 Gene3D G3DSA:1.20.970.10 6 70 1.1E-25 T 14-09-2016 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 Pfam PF00591 Glycosyl transferase family, a/b domain 75 323 4.1E-92 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 PANTHER PTHR11922:SF5 23 35 1.5E-107 T 14-09-2016 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 PANTHER PTHR11922 23 35 1.5E-107 T 14-09-2016 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 PANTHER PTHR11922 69 338 1.5E-107 T 14-09-2016 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 SUPERFAMILY SSF47648 5 70 3.79E-19 T 14-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 Gene3D G3DSA:3.40.1030.10 73 335 1.2E-101 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 PANTHER PTHR11922:SF5 69 338 1.5E-107 T 14-09-2016 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 SUPERFAMILY SSF52418 76 336 2.22E-88 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK01_RS11140 4dfaa41c0ae91925481234aa436f8040 338 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 332 6.5E-116 T 14-09-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 SUPERFAMILY SSF55785 118 231 2.09E-29 T 14-09-2016 IPR000014 PAS domain AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 Pfam PF00989 PAS fold 111 220 2.5E-17 T 14-09-2016 IPR013767 PAS fold GO:0006355 AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 SMART SM00091 107 173 7.5E-11 T 14-09-2016 IPR000014 PAS domain AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 450 1.3E-11 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 PANTHER PTHR24423 61 451 2.6E-61 T 14-09-2016 AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 316 2.1E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 Gene3D G3DSA:1.10.287.130 243 314 1.2E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 SUPERFAMILY SSF47384 236 318 1.9E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 SMART SM00388 250 318 2.6E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 Gene3D G3DSA:3.30.450.20 100 221 2.5E-25 T 14-09-2016 AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 SUPERFAMILY SSF55874 307 451 9.69E-23 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 105 229 1.8E-31 T 14-09-2016 IPR000014 PAS domain AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 Gene3D G3DSA:3.30.565.10 317 451 2.2E-22 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS30135 5dcde453d6d17077cda0260c8c796d0f 451 SMART SM00086 183 223 1.9E-5 T 14-09-2016 IPR001610 PAC motif AMK01_RS21400 83e877534b160ca1bc1f8d4b312b5b0c 319 SMART SM00304 260 315 4.6E-4 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS21400 83e877534b160ca1bc1f8d4b312b5b0c 319 Pfam PF13756 Stimulus-sensing domain 91 200 6.0E-37 T 14-09-2016 IPR025919 Stimulus-sensing domain AMK01_RS21400 83e877534b160ca1bc1f8d4b312b5b0c 319 Pfam PF00672 HAMP domain 242 311 4.2E-12 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS21400 83e877534b160ca1bc1f8d4b312b5b0c 319 Pfam PF13755 Sensor N-terminal transmembrane domain 1 66 9.8E-32 T 14-09-2016 IPR025908 Sensor N-terminal transmembrane domain AMK01_RS05420 5e7e12f3065fc68aeb5e995cd391770f 509 PANTHER PTHR11814 8 486 5.1E-164 T 14-09-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 AMK01_RS05420 5e7e12f3065fc68aeb5e995cd391770f 509 Pfam PF00916 Sulfate permease family 8 367 8.1E-57 T 14-09-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMK01_RS05420 5e7e12f3065fc68aeb5e995cd391770f 509 PANTHER PTHR11814:SF123 8 486 5.1E-164 T 14-09-2016 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 PANTHER PTHR23135 14 467 5.3E-131 T 14-09-2016 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 Gene3D G3DSA:3.40.1390.10 25 96 3.1E-21 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 SUPERFAMILY SSF63418 19 102 5.75E-21 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 PANTHER PTHR23135:SF3 14 467 5.3E-131 T 14-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 SUPERFAMILY SSF53623 107 321 2.22E-54 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 SUPERFAMILY SSF53244 328 465 2.75E-31 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 Gene3D G3DSA:3.90.190.20 328 468 6.3E-37 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 465 1.8E-117 T 14-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 Pfam PF08245 Mur ligase middle domain 112 301 1.3E-48 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 Gene3D G3DSA:3.40.1190.10 97 319 3.1E-69 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 466 32.334 T 14-09-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 394 2.4E-10 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14635 84e7d6a6ed8d7ab01feec4eb977664aa 479 Pfam PF01225 Mur ligase family, catalytic domain 26 100 3.3E-15 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS27190 a6d44d09cad8afb32b8ce264ab7a764e 220 PANTHER PTHR24423 4 215 6.3E-32 T 14-09-2016 AMK01_RS27190 a6d44d09cad8afb32b8ce264ab7a764e 220 PANTHER PTHR24423:SF486 4 215 6.3E-32 T 14-09-2016 AMK01_RS27190 a6d44d09cad8afb32b8ce264ab7a764e 220 Pfam PF00512 His Kinase A (phospho-acceptor) domain 113 180 6.8E-16 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS27190 a6d44d09cad8afb32b8ce264ab7a764e 220 Gene3D G3DSA:1.10.287.130 104 165 1.2E-16 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS27190 a6d44d09cad8afb32b8ce264ab7a764e 220 Gene3D G3DSA:3.30.565.10 166 198 4.1E-4 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS27190 a6d44d09cad8afb32b8ce264ab7a764e 220 SMART SM00388 112 180 7.0E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS27190 a6d44d09cad8afb32b8ce264ab7a764e 220 SUPERFAMILY SSF47384 97 180 1.37E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02050 836e3033cee4632defd1f35acd9f278b 139 Gene3D G3DSA:1.10.260.40 15 78 1.1E-17 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS02050 836e3033cee4632defd1f35acd9f278b 139 SMART SM00530 18 73 6.7E-12 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS02050 836e3033cee4632defd1f35acd9f278b 139 PANTHER PTHR10245:SF38 8 78 3.3E-38 T 14-09-2016 AMK01_RS02050 836e3033cee4632defd1f35acd9f278b 139 SUPERFAMILY SSF47413 5 82 1.51E-29 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS02050 836e3033cee4632defd1f35acd9f278b 139 Pfam PF01381 Helix-turn-helix 19 72 1.1E-11 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS02050 836e3033cee4632defd1f35acd9f278b 139 PANTHER PTHR10245 8 78 3.3E-38 T 14-09-2016 AMK01_RS12710 82efc6600c6eabf6a0d4ff9fd824277e 279 PANTHER PTHR21091:SF16 1 249 2.0E-64 T 14-09-2016 AMK01_RS12710 82efc6600c6eabf6a0d4ff9fd824277e 279 Gene3D G3DSA:3.30.950.10 131 260 6.5E-44 T 14-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK01_RS12710 82efc6600c6eabf6a0d4ff9fd824277e 279 PANTHER PTHR21091 1 249 2.0E-64 T 14-09-2016 AMK01_RS12710 82efc6600c6eabf6a0d4ff9fd824277e 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 228 5.5E-42 T 14-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK01_RS12710 82efc6600c6eabf6a0d4ff9fd824277e 279 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 95 128 - T 14-09-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS12710 82efc6600c6eabf6a0d4ff9fd824277e 279 Gene3D G3DSA:3.40.1010.10 14 130 7.6E-41 T 14-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK01_RS12710 82efc6600c6eabf6a0d4ff9fd824277e 279 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 15 252 7.8E-86 T 14-09-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK01_RS12710 82efc6600c6eabf6a0d4ff9fd824277e 279 SUPERFAMILY SSF53790 12 258 2.75E-72 T 14-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PANTHER PTHR13370:SF7 4 131 1.3E-40 T 14-09-2016 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PANTHER PTHR13370 159 329 1.3E-40 T 14-09-2016 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 Gene3D G3DSA:3.40.50.150 334 460 1.7E-60 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 Gene3D G3DSA:3.40.50.150 91 269 1.7E-60 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PANTHER PTHR13370:SF7 159 329 1.3E-40 T 14-09-2016 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PANTHER PTHR13370 4 131 1.3E-40 T 14-09-2016 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 Pfam PF01555 DNA methylase 123 421 1.1E-41 T 14-09-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 373 395 1.1E-20 T 14-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 122 134 1.1E-20 T 14-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 396 410 1.1E-20 T 14-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 178 197 1.1E-20 T 14-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 SUPERFAMILY SSF53335 352 435 1.31E-58 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 SUPERFAMILY SSF53335 89 292 1.31E-58 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PANTHER PTHR13370 349 675 1.3E-40 T 14-09-2016 AMK01_RS00535 b911514471ce2b06ba69a26649af14bb 761 PANTHER PTHR13370:SF7 349 675 1.3E-40 T 14-09-2016 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 Gene3D G3DSA:1.10.560.10 3 196 1.5E-47 T 14-09-2016 IPR027413 GroEL-like equatorial domain AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-09-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 SUPERFAMILY SSF52029 184 376 1.21E-86 T 14-09-2016 IPR027409 GroEL-like apical domain AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.2E-256 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 PANTHER PTHR11353 2 545 4.6E-261 T 14-09-2016 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 4.3E-100 T 14-09-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 Gene3D G3DSA:1.10.560.10 368 518 9.2E-45 T 14-09-2016 IPR027413 GroEL-like equatorial domain AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 542 42.458 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 SUPERFAMILY SSF54849 138 203 2.01E-22 T 14-09-2016 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 PRINTS PR00298 60kDa chaperonin signature 27 53 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 PRINTS PR00298 60kDa chaperonin signature 83 110 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 Gene3D G3DSA:3.50.7.10 197 367 8.2E-97 T 14-09-2016 IPR027409 GroEL-like apical domain AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 SUPERFAMILY SSF48592 6 134 1.42E-77 T 14-09-2016 AMK01_RS04230 dddc32803ffcca3faeb491f1eeb73e3e 545 SUPERFAMILY SSF48592 406 521 1.42E-77 T 14-09-2016 AMK01_RS00405 2eb4733f6054c731fe3ed6dab7ef0298 276 Gene3D G3DSA:3.20.20.150 6 274 3.3E-51 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS00405 2eb4733f6054c731fe3ed6dab7ef0298 276 PANTHER PTHR12110 1 266 3.3E-81 T 14-09-2016 AMK01_RS00405 2eb4733f6054c731fe3ed6dab7ef0298 276 PANTHER PTHR12110:SF27 1 266 3.3E-81 T 14-09-2016 AMK01_RS00405 2eb4733f6054c731fe3ed6dab7ef0298 276 Pfam PF01261 Xylose isomerase-like TIM barrel 27 226 7.1E-28 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS00405 2eb4733f6054c731fe3ed6dab7ef0298 276 SUPERFAMILY SSF51658 7 274 7.6E-53 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS11750 ff4f7df7b93b66a13770a9d636ff9d3a 216 Gene3D G3DSA:1.10.3720.10 12 213 8.2E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11750 ff4f7df7b93b66a13770a9d636ff9d3a 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 106 8.5E-29 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS11750 ff4f7df7b93b66a13770a9d636ff9d3a 216 PANTHER PTHR30614 4 216 3.0E-111 T 14-09-2016 AMK01_RS11750 ff4f7df7b93b66a13770a9d636ff9d3a 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 210 1.0E-14 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11750 ff4f7df7b93b66a13770a9d636ff9d3a 216 PANTHER PTHR30614:SF8 4 216 3.0E-111 T 14-09-2016 AMK01_RS11750 ff4f7df7b93b66a13770a9d636ff9d3a 216 SUPERFAMILY SSF161098 12 197 7.72E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Gene3D G3DSA:1.10.150.50 2 57 1.3E-18 T 14-09-2016 IPR013761 Sterile alpha motif/pointed domain AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 74 250 6.6E-26 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Pfam PF13191 AAA ATPase domain 271 454 3.2E-18 T 14-09-2016 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Gene3D G3DSA:3.40.50.300 270 305 1.1E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Gene3D G3DSA:3.40.50.300 390 446 1.1E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 PANTHER PTHR16305:SF28 65 728 6.9E-111 T 14-09-2016 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Gene3D G3DSA:3.30.70.1230 74 251 1.5E-33 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 SUPERFAMILY SSF48452 1009 1084 7.96E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 SUPERFAMILY SSF48452 854 968 7.96E-9 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 SUPERFAMILY SSF47769 2 58 3.49E-16 T 14-09-2016 IPR013761 Sterile alpha motif/pointed domain AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 SMART SM00044 43 240 8.6E-13 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 SMART SM00454 2 60 1.2E-11 T 14-09-2016 IPR001660 Sterile alpha motif domain GO:0005515 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 PANTHER PTHR16305 65 728 6.9E-111 T 14-09-2016 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 SUPERFAMILY SSF55073 74 251 1.57E-45 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Pfam PF00536 SAM domain (Sterile alpha motif) 2 57 4.1E-16 T 14-09-2016 IPR001660 Sterile alpha motif domain GO:0005515 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Gene3D G3DSA:3.40.50.300 306 322 3.1E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Gene3D G3DSA:3.40.50.300 485 603 3.1E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Gene3D G3DSA:1.25.40.10 666 763 3.5E-12 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 Gene3D G3DSA:1.25.40.10 894 1085 3.5E-12 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 SUPERFAMILY SSF52540 397 564 4.32E-16 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05970 4238a7e79f82a4b03651cc7bf1a3ebc1 1102 SUPERFAMILY SSF52540 253 359 4.32E-16 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15600 02336df1621f523d0339ef32a9f6c173 302 Gene3D G3DSA:3.60.21.10 1 233 5.3E-34 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS15600 02336df1621f523d0339ef32a9f6c173 302 SUPERFAMILY SSF56300 2 277 3.93E-39 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS15600 02336df1621f523d0339ef32a9f6c173 302 Pfam PF00149 Calcineurin-like phosphoesterase 2 230 2.3E-12 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 Gene3D G3DSA:4.10.910.10 73 122 2.3E-29 T 14-09-2016 IPR027437 30s ribosomal protein S13, C-terminal AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.526 T 14-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-09-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 8.6E-54 T 14-09-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 PIRSF PIRSF002134 1 122 2.0E-44 T 14-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 Gene3D G3DSA:1.10.8.50 2 72 1.5E-29 T 14-09-2016 AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 SUPERFAMILY SSF46946 2 121 2.35E-46 T 14-09-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 PANTHER PTHR10871 2 122 3.0E-64 T 14-09-2016 AMK01_RS08560 d3178b0bff6c5c1b42a33aff30dbb734 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 5.7E-32 T 14-09-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 Pfam PF12002 MgsA AAA+ ATPase C terminal 263 428 9.7E-68 T 14-09-2016 IPR021886 MgsA AAA+ ATPase C-terminal AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 SMART SM00382 53 169 1.3E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 Pfam PF16193 AAA C-terminal domain 187 262 3.9E-20 T 14-09-2016 IPR032423 AAA ATPase, C-terminal domain AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 PANTHER PTHR13779:SF7 12 438 1.9E-180 T 14-09-2016 AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 SUPERFAMILY SSF48019 248 433 2.44E-75 T 14-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 20 150 7.4E-15 T 14-09-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 Gene3D G3DSA:1.10.3710.10 343 436 2.9E-32 T 14-09-2016 AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 SUPERFAMILY SSF52540 17 225 8.78E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 Gene3D G3DSA:3.40.50.300 16 157 3.6E-29 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 Gene3D G3DSA:1.20.272.10 244 342 1.6E-44 T 14-09-2016 AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 PANTHER PTHR13779 12 438 1.9E-180 T 14-09-2016 AMK01_RS08615 8b4c66b7b89e187b963d9343230342a7 438 Gene3D G3DSA:1.10.8.60 158 223 2.1E-6 T 14-09-2016 AMK01_RS09995 c7576aa8f3371438f241ce5edfa7cf21 233 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 194 6.2E-29 T 14-09-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMK01_RS09995 c7576aa8f3371438f241ce5edfa7cf21 233 Gene3D G3DSA:3.20.20.60 5 217 3.9E-44 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS09995 c7576aa8f3371438f241ce5edfa7cf21 233 PANTHER PTHR30502 5 225 2.1E-50 T 14-09-2016 AMK01_RS09995 c7576aa8f3371438f241ce5edfa7cf21 233 SUPERFAMILY SSF51621 5 219 3.38E-51 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS06800 972cb4af242dc8681ef665c9f982f300 370 PANTHER PTHR11751:SF366 19 350 7.1E-54 T 14-09-2016 AMK01_RS06800 972cb4af242dc8681ef665c9f982f300 370 Gene3D G3DSA:3.40.640.10 47 256 1.4E-45 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS06800 972cb4af242dc8681ef665c9f982f300 370 Gene3D G3DSA:3.90.1150.10 257 364 3.9E-20 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS06800 972cb4af242dc8681ef665c9f982f300 370 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 14-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AMK01_RS06800 972cb4af242dc8681ef665c9f982f300 370 SUPERFAMILY SSF53383 27 366 3.3E-66 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS06800 972cb4af242dc8681ef665c9f982f300 370 PANTHER PTHR11751 19 350 7.1E-54 T 14-09-2016 AMK01_RS06800 972cb4af242dc8681ef665c9f982f300 370 Pfam PF00155 Aminotransferase class I and II 39 356 1.3E-33 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS19875 eb053f710de95337b2ebba57106a8bc1 336 PANTHER PTHR31528 1 335 3.0E-57 T 14-09-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 AMK01_RS19875 eb053f710de95337b2ebba57106a8bc1 336 SUPERFAMILY SSF53850 33 280 2.48E-33 T 14-09-2016 AMK01_RS19875 eb053f710de95337b2ebba57106a8bc1 336 Gene3D G3DSA:3.40.190.10 124 238 3.6E-6 T 14-09-2016 AMK01_RS19875 eb053f710de95337b2ebba57106a8bc1 336 Pfam PF09084 NMT1/THI5 like 41 253 4.6E-65 T 14-09-2016 IPR015168 SsuA/THI5-like AMK01_RS02770 18c3f94aec21575345cf97285332d087 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 389 1.4E-131 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS02770 18c3f94aec21575345cf97285332d087 394 PANTHER PTHR11808 4 394 1.7E-201 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS02770 18c3f94aec21575345cf97285332d087 394 Gene3D G3DSA:3.40.640.10 6 255 4.4E-86 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS02770 18c3f94aec21575345cf97285332d087 394 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 8 389 3.5E-168 T 14-09-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 AMK01_RS02770 18c3f94aec21575345cf97285332d087 394 SUPERFAMILY SSF53383 21 391 3.19E-118 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS02770 18c3f94aec21575345cf97285332d087 394 PANTHER PTHR11808:SF36 4 394 1.7E-201 T 14-09-2016 AMK01_RS02770 18c3f94aec21575345cf97285332d087 394 PIRSF PIRSF001434 1 393 4.3E-129 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS02770 18c3f94aec21575345cf97285332d087 394 Gene3D G3DSA:3.90.1150.10 257 392 7.9E-47 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS12150 0863187a738160e2be01b591ae8e2d2e 232 Gene3D G3DSA:3.40.50.1360 5 138 1.3E-55 T 14-09-2016 AMK01_RS12150 0863187a738160e2be01b591ae8e2d2e 232 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 224 3.2E-77 T 14-09-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS12150 0863187a738160e2be01b591ae8e2d2e 232 SUPERFAMILY SSF75445 128 211 7.19E-20 T 14-09-2016 AMK01_RS12150 0863187a738160e2be01b591ae8e2d2e 232 PANTHER PTHR11934 1 232 7.1E-89 T 14-09-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS12150 0863187a738160e2be01b591ae8e2d2e 232 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 228 32.615 T 14-09-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS12150 0863187a738160e2be01b591ae8e2d2e 232 Gene3D G3DSA:3.30.70.260 139 208 8.8E-23 T 14-09-2016 AMK01_RS12150 0863187a738160e2be01b591ae8e2d2e 232 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 51 223 3.5E-61 T 14-09-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK01_RS12150 0863187a738160e2be01b591ae8e2d2e 232 SUPERFAMILY SSF100950 2 146 3.53E-42 T 14-09-2016 AMK01_RS11425 4e3eb9dc292502af5a57adf436c0cb27 155 PANTHER PTHR35146:SF1 1 149 3.9E-39 T 14-09-2016 AMK01_RS11425 4e3eb9dc292502af5a57adf436c0cb27 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 14 142 1.9E-43 T 14-09-2016 IPR003791 Protein of unknown function UPF0178 AMK01_RS11425 4e3eb9dc292502af5a57adf436c0cb27 155 PANTHER PTHR35146 1 149 3.9E-39 T 14-09-2016 AMK01_RS11425 4e3eb9dc292502af5a57adf436c0cb27 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 144 27.745 T 14-09-2016 IPR003791 Protein of unknown function UPF0178 AMK01_RS11020 63714e384370aa5f88143b0d57770bd0 169 Gene3D G3DSA:3.40.630.30 1 164 3.9E-21 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11020 63714e384370aa5f88143b0d57770bd0 169 SUPERFAMILY SSF55729 2 168 1.04E-24 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11020 63714e384370aa5f88143b0d57770bd0 169 Pfam PF13523 Acetyltransferase (GNAT) domain 9 113 2.0E-16 T 14-09-2016 AMK01_RS11020 63714e384370aa5f88143b0d57770bd0 169 SMART SM01006 5 52 1.6E-10 T 14-09-2016 IPR019432 Siderophore biosynthesis protein, conserved domain AMK01_RS16720 511f1801e3561a8195604ee9f20f3a43 310 SUPERFAMILY SSF54593 4 283 1.16E-44 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS16720 511f1801e3561a8195604ee9f20f3a43 310 PANTHER PTHR36110:SF2 3 309 6.0E-106 T 14-09-2016 AMK01_RS16720 511f1801e3561a8195604ee9f20f3a43 310 Gene3D G3DSA:3.10.180.10 135 309 6.8E-38 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS16720 511f1801e3561a8195604ee9f20f3a43 310 Gene3D G3DSA:3.10.180.10 4 127 8.3E-27 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS16720 511f1801e3561a8195604ee9f20f3a43 310 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 268 9.9E-23 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS16720 511f1801e3561a8195604ee9f20f3a43 310 PANTHER PTHR36110 3 309 6.0E-106 T 14-09-2016 AMK01_RS07060 0e1c68fc38a50c8290a1c5606fcd37ec 193 Gene3D G3DSA:3.40.50.1010 2 164 1.6E-48 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS07060 0e1c68fc38a50c8290a1c5606fcd37ec 193 PANTHER PTHR35458:SF1 4 178 1.4E-88 T 14-09-2016 AMK01_RS07060 0e1c68fc38a50c8290a1c5606fcd37ec 193 PANTHER PTHR35458 4 178 1.4E-88 T 14-09-2016 AMK01_RS07060 0e1c68fc38a50c8290a1c5606fcd37ec 193 Pfam PF01936 NYN domain 7 164 3.9E-40 T 14-09-2016 IPR021139 NYN domain, limkain-b1-type AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 SUPERFAMILY SSF103025 418 722 1.73E-102 T 14-09-2016 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:3.50.50.60 326 384 1.3E-63 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:3.50.50.60 145 223 1.3E-63 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:3.50.50.60 3 86 1.3E-63 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:3.30.70.1400 492 567 3.2E-20 T 14-09-2016 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:3.30.9.10 224 325 2.4E-50 T 14-09-2016 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:3.30.9.10 91 144 2.4E-50 T 14-09-2016 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 SUPERFAMILY SSF51905 9 224 3.88E-64 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 SUPERFAMILY SSF51905 326 411 3.88E-64 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Pfam PF01266 FAD dependent oxidoreductase 11 365 6.3E-57 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 PANTHER PTHR13847:SF193 2 445 4.2E-159 T 14-09-2016 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 SUPERFAMILY SSF101790 723 816 2.29E-19 T 14-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 708 802 2.4E-17 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 SUPERFAMILY SSF54373 224 325 8.63E-30 T 14-09-2016 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Pfam PF01571 Aminomethyltransferase folate-binding domain 425 699 4.4E-81 T 14-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:3.30.1360.120 421 491 1.5E-38 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:3.30.1360.120 580 676 1.5E-38 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 PANTHER PTHR13847 2 445 4.2E-159 T 14-09-2016 AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Pfam PF16350 FAD dependent oxidoreductase central domain 368 423 2.5E-19 T 14-09-2016 IPR032503 FAD dependent oxidoreductase, central domain AMK01_RS00455 f8594537d9afec67e12b90868cd8d590 816 Gene3D G3DSA:2.40.30.110 720 801 1.5E-22 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS04175 7dd7f6cdef9fd30919628766809aef95 234 Gene3D G3DSA:3.40.50.1000 89 232 2.5E-46 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04175 7dd7f6cdef9fd30919628766809aef95 234 Gene3D G3DSA:1.10.150.240 21 88 2.1E-33 T 14-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK01_RS04175 7dd7f6cdef9fd30919628766809aef95 234 PANTHER PTHR12725 1 231 8.0E-69 T 14-09-2016 AMK01_RS04175 7dd7f6cdef9fd30919628766809aef95 234 SUPERFAMILY SSF56784 8 232 4.66E-31 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04175 7dd7f6cdef9fd30919628766809aef95 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 193 1.5E-9 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04175 7dd7f6cdef9fd30919628766809aef95 234 PANTHER PTHR12725:SF59 1 231 8.0E-69 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PANTHER PTHR30081:SF1 156 214 4.2E-138 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PANTHER PTHR30081:SF1 25 96 4.2E-138 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 620 806 2.7E-47 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 270 500 3.0E-77 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 Pfam PF02355 Protein export membrane protein 633 817 4.9E-60 T 14-09-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 Pfam PF02355 Protein export membrane protein 339 501 6.1E-15 T 14-09-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 SUPERFAMILY SSF82866 597 822 1.31E-41 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 Pfam PF07549 SecD/SecF GG Motif 38 63 9.6E-6 T 14-09-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 Pfam PF07549 SecD/SecF GG Motif 557 582 3.2E-6 T 14-09-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 534 820 26.95 T 14-09-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PANTHER PTHR30081:SF1 237 517 4.2E-138 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 505 8.3E-133 T 14-09-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 SUPERFAMILY SSF82866 317 514 1.7E-40 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PANTHER PTHR30081 25 96 4.2E-138 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PRINTS PR01755 Bacterial translocase SecF protein signature 725 743 6.5E-27 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PRINTS PR01755 Bacterial translocase SecF protein signature 561 576 6.5E-27 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PRINTS PR01755 Bacterial translocase SecF protein signature 677 691 6.5E-27 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PRINTS PR01755 Bacterial translocase SecF protein signature 757 772 6.5E-27 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 562 809 1.6E-71 T 14-09-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 522 42.028 T 14-09-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PANTHER PTHR30081 156 214 4.2E-138 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 PANTHER PTHR30081 237 517 4.2E-138 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 Gene3D G3DSA:1.20.1640.10 317 515 1.3E-26 T 14-09-2016 AMK01_RS03350 b871b1bbd27e8d5afec1a57c10a49cc3 849 Gene3D G3DSA:1.20.1640.10 625 824 1.1E-30 T 14-09-2016 AMK01_RS12235 72e9724a3bc8daf21662aadb31984558 316 Pfam PF12802 MarR family 20 54 1.8E-6 T 14-09-2016 AMK01_RS12235 72e9724a3bc8daf21662aadb31984558 316 Gene3D G3DSA:3.40.50.1360 56 315 4.6E-78 T 14-09-2016 AMK01_RS12235 72e9724a3bc8daf21662aadb31984558 316 Gene3D G3DSA:1.10.10.10 15 54 1.1E-6 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12235 72e9724a3bc8daf21662aadb31984558 316 PANTHER PTHR34294 6 316 6.9E-83 T 14-09-2016 AMK01_RS12235 72e9724a3bc8daf21662aadb31984558 316 SUPERFAMILY SSF46689 9 65 6.09E-5 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS12235 72e9724a3bc8daf21662aadb31984558 316 Pfam PF04198 Putative sugar-binding domain 61 315 1.1E-65 T 14-09-2016 IPR007324 Sugar-binding domain, putative GO:0030246 AMK01_RS12235 72e9724a3bc8daf21662aadb31984558 316 SUPERFAMILY SSF100950 62 314 1.02E-65 T 14-09-2016 AMK01_RS13635 9d1f84e2c449173b94b29b5620756533 97 Gene3D G3DSA:3.30.70.20 11 94 5.3E-14 T 14-09-2016 AMK01_RS13635 9d1f84e2c449173b94b29b5620756533 97 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS13635 9d1f84e2c449173b94b29b5620756533 97 Pfam PF00037 4Fe-4S binding domain 72 92 7.6E-7 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK01_RS13635 9d1f84e2c449173b94b29b5620756533 97 Pfam PF12800 4Fe-4S binding domain 22 36 0.14 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK01_RS13635 9d1f84e2c449173b94b29b5620756533 97 SUPERFAMILY SSF54862 16 93 5.76E-16 T 14-09-2016 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 263 34.163 T 14-09-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 6.6E-45 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 6.6E-45 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 6.6E-45 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 6.6E-45 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 6.6E-45 T 14-09-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 PANTHER PTHR11063:SF6 9 374 9.9E-106 T 14-09-2016 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 Pfam PF01472 PUA domain 282 355 2.2E-20 T 14-09-2016 IPR002478 PUA domain GO:0003723 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 Gene3D G3DSA:3.40.1160.10 11 254 1.4E-48 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 Pfam PF00696 Amino acid kinase family 12 240 3.3E-37 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 Gene3D G3DSA:2.30.130.10 278 370 5.9E-26 T 14-09-2016 IPR015947 PUA-like domain AMK01_RS20900 9af232a3e09f642d572796498960212f 389 SUPERFAMILY SSF88697 282 371 1.6E-23 T 14-09-2016 IPR015947 PUA-like domain AMK01_RS20900 9af232a3e09f642d572796498960212f 389 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 14-09-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 PIRSF PIRSF000729 7 373 1.3E-118 T 14-09-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 SUPERFAMILY SSF53633 11 255 1.57E-58 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 PANTHER PTHR11063 9 374 9.9E-106 T 14-09-2016 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 TIGRFAM TIGR01027 proB: glutamate 5-kinase 11 371 1.2E-117 T 14-09-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS20900 9af232a3e09f642d572796498960212f 389 SMART SM00359 282 364 2.1E-16 T 14-09-2016 IPR002478 PUA domain GO:0003723 AMK01_RS07150 91ff9db276283de81ce04263cf0b14c8 293 SUPERFAMILY SSF50182 114 179 4.58E-17 T 14-09-2016 IPR010920 LSM domain AMK01_RS07150 91ff9db276283de81ce04263cf0b14c8 293 SUPERFAMILY SSF82861 27 112 2.75E-18 T 14-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMK01_RS07150 91ff9db276283de81ce04263cf0b14c8 293 PANTHER PTHR30221 16 265 5.0E-67 T 14-09-2016 AMK01_RS07150 91ff9db276283de81ce04263cf0b14c8 293 Gene3D G3DSA:3.30.70.100 182 265 1.0E-22 T 14-09-2016 AMK01_RS07150 91ff9db276283de81ce04263cf0b14c8 293 Pfam PF00924 Mechanosensitive ion channel 71 265 2.4E-54 T 14-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK01_RS07150 91ff9db276283de81ce04263cf0b14c8 293 SUPERFAMILY SSF82689 181 265 1.44E-21 T 14-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK01_RS07150 91ff9db276283de81ce04263cf0b14c8 293 Gene3D G3DSA:2.30.30.60 129 178 2.0E-15 T 14-09-2016 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 Gene3D G3DSA:3.30.450.20 379 484 9.4E-9 T 14-09-2016 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 SMART SM00387 655 767 4.7E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 PANTHER PTHR24423 242 500 1.6E-105 T 14-09-2016 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 PANTHER PTHR24423 536 764 1.6E-105 T 14-09-2016 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 Gene3D G3DSA:3.30.450.20 252 378 1.9E-17 T 14-09-2016 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 279 376 3.9E-6 T 14-09-2016 IPR000014 PAS domain AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 SUPERFAMILY SSF47384 529 611 1.79E-21 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 SUPERFAMILY SSF55874 599 764 4.06E-44 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 SUPERFAMILY SSF55785 367 484 3.43E-9 T 14-09-2016 IPR000014 PAS domain AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 Gene3D G3DSA:3.30.565.10 596 764 1.4E-42 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 Pfam PF12860 PAS fold 391 490 1.9E-11 T 14-09-2016 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 Pfam PF08447 PAS fold 278 363 5.3E-13 T 14-09-2016 IPR013655 PAS fold-3 GO:0005515 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 SMART SM00086 329 370 1.6E-7 T 14-09-2016 IPR001610 PAC motif AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 751 764 8.6E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 727 745 8.6E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 706 8.6E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 Pfam PF00512 His Kinase A (phospho-acceptor) domain 541 610 1.4E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 656 766 1.2E-23 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 Gene3D G3DSA:1.10.287.130 533 595 1.9E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 SUPERFAMILY SSF55785 267 372 1.92E-14 T 14-09-2016 IPR000014 PAS domain AMK01_RS06625 fc964d8bca41ca2caadca1f68403db2c 767 SMART SM00388 541 610 2.3E-24 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 SUPERFAMILY SSF54810 400 520 4.58E-51 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 Gene3D G3DSA:3.30.300.10 396 520 1.2E-50 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 Pfam PF03054 tRNA methyl transferase 223 252 1.8E-5 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 SUPERFAMILY SSF52317 8 232 1.89E-55 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 PANTHER PTHR11922 8 517 1.0E-272 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 Gene3D G3DSA:3.40.50.880 6 217 3.3E-56 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 Gene3D G3DSA:3.40.50.620 218 391 2.9E-60 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 Pfam PF00958 GMP synthase C terminal domain 428 519 9.2E-43 T 14-09-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 PRINTS PR00097 Anthranilate synthase component II signature 172 185 5.0E-5 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 PRINTS PR00097 Anthranilate synthase component II signature 81 92 5.0E-5 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 199 1.1E-70 T 14-09-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 PANTHER PTHR11922:SF2 8 517 1.0E-272 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 520 4.3E-145 T 14-09-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 520 54.164 T 14-09-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 Pfam PF00117 Glutamine amidotransferase class-I 12 194 1.9E-37 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 1.9E-7 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.9E-7 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.9E-7 T 14-09-2016 AMK01_RS01670 9ec5aa040392577cad390a6bbb917044 520 SUPERFAMILY SSF52402 192 413 1.23E-58 T 14-09-2016 AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 PANTHER PTHR24031 17 475 1.4E-182 T 14-09-2016 AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 PANTHER PTHR24031:SF261 17 475 1.4E-182 T 14-09-2016 AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 Gene3D G3DSA:3.40.50.300 15 229 8.9E-83 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 SMART SM00490 276 357 6.5E-34 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 Pfam PF00270 DEAD/DEAH box helicase 42 212 2.0E-52 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 Gene3D G3DSA:3.40.50.300 230 385 3.4E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 Pfam PF00271 Helicase conserved C-terminal domain 249 357 3.7E-29 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 SMART SM00487 37 239 8.5E-62 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS16050 60641d5d11aff02f519babb75b11bf12 576 SUPERFAMILY SSF52540 92 378 3.35E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19200 953fb522be1aa39e1b44992a2df13d04 137 SUPERFAMILY SSF52218 2 134 1.09E-24 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS19200 953fb522be1aa39e1b44992a2df13d04 137 TIGRFAM TIGR00333 nrdI: nrdI protein 5 133 4.4E-49 T 14-09-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI AMK01_RS19200 953fb522be1aa39e1b44992a2df13d04 137 Hamap MF_00128 Protein NrdI [nrdI]. 3 135 34.379 T 14-09-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial AMK01_RS19200 953fb522be1aa39e1b44992a2df13d04 137 Gene3D G3DSA:3.40.50.360 4 134 7.8E-52 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS19200 953fb522be1aa39e1b44992a2df13d04 137 Pfam PF07972 NrdI Flavodoxin like 5 125 1.1E-44 T 14-09-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI AMK01_RS19200 953fb522be1aa39e1b44992a2df13d04 137 PANTHER PTHR37297:SF1 2 135 7.5E-44 T 14-09-2016 AMK01_RS19200 953fb522be1aa39e1b44992a2df13d04 137 PIRSF PIRSF005087 1 137 1.5E-52 T 14-09-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI AMK01_RS19200 953fb522be1aa39e1b44992a2df13d04 137 PANTHER PTHR37297 2 135 7.5E-44 T 14-09-2016 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 257 286 7.6E-41 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 392 7.6E-41 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 7.6E-41 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 334 361 7.6E-41 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 PANTHER PTHR32089 189 486 2.2E-93 T 14-09-2016 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 Gene3D G3DSA:1.10.490.10 5 161 8.4E-45 T 14-09-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 Gene3D G3DSA:1.10.287.950 251 455 1.3E-52 T 14-09-2016 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 SMART SM00283 236 483 3.7E-87 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 SUPERFAMILY SSF58104 203 484 4.97E-66 T 14-09-2016 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 SUPERFAMILY SSF46458 5 160 3.29E-35 T 14-09-2016 IPR009050 Globin-like AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 297 482 4.4E-52 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 Pfam PF11563 Protoglobin 7 168 4.6E-39 T 14-09-2016 AMK01_RS02255 4bfd164bd80773fc8aeb6724cd322ed8 498 PANTHER PTHR32089:SF63 189 486 2.2E-93 T 14-09-2016 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 PANTHER PTHR24423 151 538 6.0E-167 T 14-09-2016 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 PANTHER PTHR24423 74 85 6.0E-167 T 14-09-2016 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 SMART SM00448 421 533 2.0E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 Pfam PF13493 Domain of unknown function (DUF4118) 20 114 4.8E-14 T 14-09-2016 IPR025201 Sensor protein KdpD, transmembrane domain AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 Gene3D G3DSA:1.20.120.620 20 112 2.1E-7 T 14-09-2016 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 397 1.6E-17 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 SUPERFAMILY SSF55874 226 398 3.01E-38 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 Pfam PF00512 His Kinase A (phospho-acceptor) domain 169 232 1.4E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 SUPERFAMILY SSF47384 155 232 2.75E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 Pfam PF00072 Response regulator receiver domain 423 533 7.2E-19 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 PANTHER PTHR24423:SF438 74 85 6.0E-167 T 14-09-2016 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 SUPERFAMILY SSF52172 422 538 3.42E-30 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 Gene3D G3DSA:3.40.50.2300 421 538 4.3E-32 T 14-09-2016 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 SMART SM00388 167 235 5.7E-6 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 Gene3D G3DSA:3.30.565.10 210 398 1.3E-33 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 SMART SM00387 276 399 7.9E-25 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 356 1.2E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 1.2E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 1.2E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 1.2E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS07775 98df098557fbd413af72987eb46e5c17 548 PANTHER PTHR24423:SF438 151 538 6.0E-167 T 14-09-2016 AMK01_RS14710 223ed1e0e2a2f91bdb021468cb6ceaff 473 Pfam PF00144 Beta-lactamase 167 432 1.7E-23 T 14-09-2016 IPR001466 Beta-lactamase-related AMK01_RS14710 223ed1e0e2a2f91bdb021468cb6ceaff 473 PANTHER PTHR22935 167 431 3.2E-26 T 14-09-2016 AMK01_RS14710 223ed1e0e2a2f91bdb021468cb6ceaff 473 SUPERFAMILY SSF56601 115 453 3.58E-66 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS14710 223ed1e0e2a2f91bdb021468cb6ceaff 473 Gene3D G3DSA:3.40.710.10 150 453 4.0E-34 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS14710 223ed1e0e2a2f91bdb021468cb6ceaff 473 PANTHER PTHR22935:SF10 167 431 3.2E-26 T 14-09-2016 AMK01_RS20600 daacdbb30c7b1bb0853675a2084eaf66 233 SUPERFAMILY SSF53955 53 220 3.09E-48 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS20600 daacdbb30c7b1bb0853675a2084eaf66 233 PANTHER PTHR30400:SF0 1 225 1.6E-69 T 14-09-2016 AMK01_RS20600 daacdbb30c7b1bb0853675a2084eaf66 233 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 14 222 9.6E-57 T 14-09-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 AMK01_RS20600 daacdbb30c7b1bb0853675a2084eaf66 233 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 10 227 38.44 T 14-09-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 AMK01_RS20600 daacdbb30c7b1bb0853675a2084eaf66 233 PANTHER PTHR30400 1 225 1.6E-69 T 14-09-2016 AMK01_RS20600 daacdbb30c7b1bb0853675a2084eaf66 233 Pfam PF00912 Transglycosylase 56 201 1.9E-43 T 14-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK01_RS20600 daacdbb30c7b1bb0853675a2084eaf66 233 Gene3D G3DSA:1.10.3810.10 56 202 1.2E-46 T 14-09-2016 AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 SMART SM00382 28 221 3.1E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 PANTHER PTHR24220 5 247 8.0E-131 T 14-09-2016 AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 SUPERFAMILY SSF50331 239 334 1.06E-11 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 PANTHER PTHR24220:SF151 5 247 8.0E-131 T 14-09-2016 AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 Gene3D G3DSA:2.40.50.140 264 321 5.6E-10 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 Pfam PF00005 ABC transporter 19 163 3.3E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 Gene3D G3DSA:3.40.50.300 6 239 7.2E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12980 297cccad8cacbdb7475e27dcf74117bb 335 SUPERFAMILY SSF52540 4 243 8.52E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 188 262 2.5E-4 T 14-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 266 345 1.2E-31 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 SUPERFAMILY SSF57884 3 78 4.71E-30 T 14-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 PANTHER PTHR10815 155 345 1.3E-65 T 14-09-2016 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 SMART SM00342 98 179 9.5E-11 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 Gene3D G3DSA:3.40.10.10 4 78 1.1E-29 T 14-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 SUPERFAMILY SSF53155 186 270 1.02E-14 T 14-09-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 PANTHER PTHR10815:SF5 155 345 1.3E-65 T 14-09-2016 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 Gene3D G3DSA:1.10.10.60 79 133 2.8E-4 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 SUPERFAMILY SSF46767 265 345 4.32E-28 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 316 322 - T 14-09-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 267 346 2.1E-28 T 14-09-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 Pfam PF12833 Helix-turn-helix domain 110 176 2.9E-14 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 Pfam PF02805 Metal binding domain of Ada 11 73 1.1E-26 T 14-09-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 PIRSF PIRSF000409 1 355 2.1E-149 T 14-09-2016 IPR016221 Bifunctional regulatory protein Ada AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 Gene3D G3DSA:1.10.10.60 134 177 6.5E-7 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02315 6f270ddf8bd7d99914d5221ac9ed8d80 358 Gene3D G3DSA:1.10.10.10 265 347 1.2E-31 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14875 966b79d8483ef978b2d3e082b95b64d6 419 SUPERFAMILY SSF53850 24 415 2.81E-74 T 14-09-2016 AMK01_RS14875 966b79d8483ef978b2d3e082b95b64d6 419 Gene3D G3DSA:3.40.190.10 156 335 1.6E-34 T 14-09-2016 AMK01_RS14875 966b79d8483ef978b2d3e082b95b64d6 419 Gene3D G3DSA:3.40.190.10 28 155 6.9E-20 T 14-09-2016 AMK01_RS14875 966b79d8483ef978b2d3e082b95b64d6 419 PANTHER PTHR30061:SF1 1 418 6.9E-66 T 14-09-2016 AMK01_RS14875 966b79d8483ef978b2d3e082b95b64d6 419 Pfam PF13416 Bacterial extracellular solute-binding protein 45 334 9.1E-36 T 14-09-2016 AMK01_RS14875 966b79d8483ef978b2d3e082b95b64d6 419 PANTHER PTHR30061 1 418 6.9E-66 T 14-09-2016 AMK01_RS14875 966b79d8483ef978b2d3e082b95b64d6 419 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 135 152 - T 14-09-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 AMK01_RS04990 cf99d4196c40b009991c945c8b4c299c 229 Gene3D G3DSA:3.40.50.1000 87 222 8.5E-42 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04990 cf99d4196c40b009991c945c8b4c299c 229 Gene3D G3DSA:3.40.50.1000 3 19 8.5E-42 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04990 cf99d4196c40b009991c945c8b4c299c 229 PANTHER PTHR18901:SF9 4 223 4.4E-44 T 14-09-2016 AMK01_RS04990 cf99d4196c40b009991c945c8b4c299c 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 4.5E-19 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04990 cf99d4196c40b009991c945c8b4c299c 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 185 1.6E-13 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS04990 cf99d4196c40b009991c945c8b4c299c 229 SUPERFAMILY SSF56784 4 219 2.76E-50 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04990 cf99d4196c40b009991c945c8b4c299c 229 Gene3D G3DSA:1.10.150.240 20 85 1.7E-29 T 14-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK01_RS04990 cf99d4196c40b009991c945c8b4c299c 229 PANTHER PTHR18901 4 223 4.4E-44 T 14-09-2016 AMK01_RS16090 ac720403e94277d6015f9dd032f793ef 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 48 7.6E-10 T 14-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK01_RS16090 ac720403e94277d6015f9dd032f793ef 82 Gene3D G3DSA:3.40.1620.10 4 47 1.9E-6 T 14-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK01_RS16090 ac720403e94277d6015f9dd032f793ef 82 SUPERFAMILY SSF143120 5 52 3.14E-8 T 14-09-2016 AMK01_RS16090 ac720403e94277d6015f9dd032f793ef 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 48 5.2E-10 T 14-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK01_RS04360 60a306bc410276513981d7fefe50e55f 304 SUPERFAMILY SSF53067 3 78 4.92E-5 T 14-09-2016 AMK01_RS04360 60a306bc410276513981d7fefe50e55f 304 Pfam PF05035 2-keto-3-deoxy-galactonokinase 10 296 3.1E-97 T 14-09-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 PANTHER PTHR23501 20 467 2.4E-115 T 14-09-2016 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 Pfam PF07690 Major Facilitator Superfamily 27 418 4.0E-41 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 Gene3D G3DSA:1.20.1250.20 285 469 3.5E-14 T 14-09-2016 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 PANTHER PTHR23501:SF66 20 467 2.4E-115 T 14-09-2016 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 Gene3D G3DSA:1.20.1250.20 24 202 4.6E-27 T 14-09-2016 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 3.8E-6 T 14-09-2016 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 3.8E-6 T 14-09-2016 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 3.8E-6 T 14-09-2016 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 409 428 3.8E-6 T 14-09-2016 AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 SUPERFAMILY SSF103473 20 211 3.27E-52 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS12950 9f784b3acc0d5bf9132d5176777f57d1 481 SUPERFAMILY SSF103473 257 467 3.27E-52 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 Gene3D G3DSA:1.10.10.10 6 97 5.7E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 Gene3D G3DSA:1.25.40.10 288 485 1.2E-20 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 SMART SM00028 453 486 12.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 SMART SM00028 419 452 55.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 SMART SM00028 382 415 100.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 SUPERFAMILY SSF46894 4 98 1.39E-13 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 96 9.8E-12 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 SMART SM00862 23 97 2.2E-11 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 PANTHER PTHR23083 290 317 7.6E-15 T 14-09-2016 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 PANTHER PTHR23083 361 484 7.6E-15 T 14-09-2016 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 SUPERFAMILY SSF48452 362 486 1.03E-17 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10365 dbeb4d67da5b0131032e3514df66b546 516 SUPERFAMILY SSF48452 289 318 1.03E-17 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12925 2a8d1f0240e4ac8ce4ee71958e705962 410 SUPERFAMILY SSF103473 14 397 9.81E-30 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS12925 2a8d1f0240e4ac8ce4ee71958e705962 410 Pfam PF07690 Major Facilitator Superfamily 22 352 1.0E-13 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS12925 2a8d1f0240e4ac8ce4ee71958e705962 410 PANTHER PTHR11360 6 393 1.7E-48 T 14-09-2016 AMK01_RS12925 2a8d1f0240e4ac8ce4ee71958e705962 410 PANTHER PTHR11360:SF126 6 393 1.7E-48 T 14-09-2016 AMK01_RS12925 2a8d1f0240e4ac8ce4ee71958e705962 410 Gene3D G3DSA:1.20.1250.20 17 187 8.6E-13 T 14-09-2016 AMK01_RS12925 2a8d1f0240e4ac8ce4ee71958e705962 410 Gene3D G3DSA:1.20.1250.20 216 397 3.8E-5 T 14-09-2016 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 SUPERFAMILY SSF47831 200 320 5.23E-29 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 Gene3D G3DSA:1.10.274.10 200 309 3.2E-33 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 Gene3D G3DSA:3.50.30.10 310 433 4.8E-30 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 SUPERFAMILY SSF51621 427 725 2.07E-91 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 Pfam PF13185 GAF domain 25 160 2.4E-15 T 14-09-2016 IPR003018 GAF domain GO:0005515 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 Pfam PF05524 PEP-utilising enzyme, N-terminal 188 303 1.8E-21 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 PANTHER PTHR22931:SF23 213 728 4.5E-179 T 14-09-2016 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 SUPERFAMILY SSF55781 12 160 1.24E-26 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 Gene3D G3DSA:3.30.450.40 11 162 1.4E-42 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 Gene3D G3DSA:3.20.20.60 434 748 4.0E-90 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 9.6E-15 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 625 643 - T 14-09-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 SUPERFAMILY SSF52009 302 421 1.02E-25 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 6.5E-18 T 14-09-2016 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 6.5E-18 T 14-09-2016 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 6.5E-18 T 14-09-2016 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 6.5E-18 T 14-09-2016 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 PANTHER PTHR22931 213 728 4.5E-179 T 14-09-2016 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 183 733 4.4E-126 T 14-09-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 430 716 1.9E-88 T 14-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMK01_RS19315 8ca6c055e787ac2158421eedcf68a0c3 755 SMART SM00065 24 170 2.2E-16 T 14-09-2016 IPR003018 GAF domain GO:0005515 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 PANTHER PTHR23151:SF47 3 418 1.4E-215 T 14-09-2016 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 Gene3D G3DSA:4.10.320.10 124 167 1.6E-11 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 SUPERFAMILY SSF51230 1 93 4.06E-27 T 14-09-2016 IPR011053 Single hybrid motif AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 Gene3D G3DSA:3.30.559.10 182 416 7.8E-93 T 14-09-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 SUPERFAMILY SSF52777 188 417 1.07E-89 T 14-09-2016 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 Gene3D G3DSA:2.40.50.100 1 92 7.6E-29 T 14-09-2016 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 Pfam PF00364 Biotin-requiring enzyme 4 76 2.2E-21 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 Pfam PF02817 e3 binding domain 125 155 3.4E-6 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 PANTHER PTHR23151 3 418 1.4E-215 T 14-09-2016 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 417 6.2E-171 T 14-09-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 SUPERFAMILY SSF47005 121 160 1.83E-7 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK01_RS19985 a1696088a69116e0c5a727ea7a9b27ab 418 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 188 415 1.4E-81 T 14-09-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 Gene3D G3DSA:1.10.520.20 9 113 2.4E-26 T 14-09-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 11 181 2.0E-37 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 144 163 - T 14-09-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 PANTHER PTHR11910 9 186 2.6E-55 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 SUPERFAMILY SSF47928 9 113 9.42E-26 T 14-09-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 20.047 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 PRINTS PR00125 ATP synthase delta subunit signature 142 157 3.7E-28 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 PRINTS PR00125 ATP synthase delta subunit signature 157 175 3.7E-28 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 PRINTS PR00125 ATP synthase delta subunit signature 81 92 3.7E-28 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 PRINTS PR00125 ATP synthase delta subunit signature 92 106 3.7E-28 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 PRINTS PR00125 ATP synthase delta subunit signature 11 30 3.7E-28 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS19915 6e09cf46d5983347a2eca32029ebc767 186 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 182 9.9E-52 T 14-09-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 5 473 1.4E-210 T 14-09-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 PANTHER PTHR11908 1 474 2.2E-144 T 14-09-2016 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Gene3D G3DSA:3.30.390.50 372 473 2.8E-35 T 14-09-2016 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Gene3D G3DSA:1.10.150.120 86 163 1.5E-36 T 14-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 55 3.3E-4 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Pfam PF01799 [2Fe-2S] binding domain 84 157 2.6E-30 T 14-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 14-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 SMART SM01092 371 473 9.6E-37 T 14-09-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 PIRSF PIRSF036557 2 486 5.5E-204 T 14-09-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 SUPERFAMILY SSF54292 4 88 2.08E-18 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 372 472 5.8E-33 T 14-09-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Gene3D G3DSA:3.30.465.10 252 364 6.2E-40 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Gene3D G3DSA:3.10.20.30 3 85 3.4E-27 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 201 364 2.6E-54 T 14-09-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 SUPERFAMILY SSF55447 368 475 4.19E-33 T 14-09-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 Gene3D G3DSA:3.30.43.10 202 251 1.6E-21 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 SUPERFAMILY SSF47741 96 166 9.81E-33 T 14-09-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK01_RS15895 847723b0a447b124c160349183a77ad9 487 SUPERFAMILY SSF56176 186 364 3.52E-57 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 PANTHER PTHR24096:SF206 29 496 1.3E-211 T 14-09-2016 AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 14-09-2016 IPR020845 AMP-binding, conserved site AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 Gene3D G3DSA:3.40.50.980 13 164 2.1E-35 T 14-09-2016 AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 Gene3D G3DSA:3.40.50.980 165 313 4.8E-42 T 14-09-2016 AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 Gene3D G3DSA:2.30.38.10 319 394 1.3E-26 T 14-09-2016 AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 Pfam PF00501 AMP-binding enzyme 11 403 8.3E-103 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 Pfam PF13193 AMP-binding enzyme C-terminal domain 412 487 1.0E-14 T 14-09-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 Gene3D G3DSA:3.30.300.30 398 497 2.5E-28 T 14-09-2016 AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 PANTHER PTHR24096 29 496 1.3E-211 T 14-09-2016 AMK01_RS04695 de28d4dc344c220baeaf1fa6ffea22fe 504 SUPERFAMILY SSF56801 10 500 7.85E-148 T 14-09-2016 AMK01_RS08380 2efd4b964aa51d4329a1a43de612178f 66 PANTHER PTHR33910:SF1 9 65 3.2E-19 T 14-09-2016 AMK01_RS08380 2efd4b964aa51d4329a1a43de612178f 66 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 62 4.1E-22 T 14-09-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AMK01_RS08380 2efd4b964aa51d4329a1a43de612178f 66 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 10 38 - T 14-09-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 AMK01_RS08380 2efd4b964aa51d4329a1a43de612178f 66 Hamap MF_00422 Protein translocase subunit SecE [secE]. 6 60 11.584 T 14-09-2016 IPR022943 Preprotein translocase subunit SecE AMK01_RS08380 2efd4b964aa51d4329a1a43de612178f 66 Gene3D G3DSA:1.20.5.1030 5 62 1.4E-23 T 14-09-2016 AMK01_RS08380 2efd4b964aa51d4329a1a43de612178f 66 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 9 61 1.8E-19 T 14-09-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 AMK01_RS08380 2efd4b964aa51d4329a1a43de612178f 66 PANTHER PTHR33910 9 65 3.2E-19 T 14-09-2016 AMK01_RS16305 39514e0fb4a787f05d91222e9e219133 251 Gene3D G3DSA:1.10.260.40 33 82 6.8E-6 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS16305 39514e0fb4a787f05d91222e9e219133 251 SUPERFAMILY SSF47413 26 84 3.6E-7 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS16305 39514e0fb4a787f05d91222e9e219133 251 SMART SM00530 32 86 0.0015 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 Gene3D G3DSA:3.90.226.10 21 191 6.5E-64 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 110 123 - T 14-09-2016 IPR033135 ClpP, histidine active site AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 5 191 34.723 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 PANTHER PTHR10381 23 193 3.5E-71 T 14-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 Pfam PF00574 Clp protease 21 190 2.7E-68 T 14-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 SUPERFAMILY SSF52096 22 191 2.19E-57 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 PANTHER PTHR10381:SF22 23 193 3.5E-71 T 14-09-2016 AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 18 33 1.3E-29 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 1.3E-29 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 109 128 1.3E-29 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 1.3E-29 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS15630 fa5151cd5c59cd7637e7ee259d7fad2f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 166 185 1.3E-29 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS20255 b21deb7356dec3e65e3e5be04908a027 133 Pfam PF10984 Protein of unknown function (DUF2794) 37 121 8.4E-40 T 14-09-2016 IPR021252 Protein of unknown function DUF2794 AMK01_RS03415 44284f7b7c98b72ab153dca5ff7e9fa8 185 SUPERFAMILY SSF64438 9 155 6.13E-48 T 14-09-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMK01_RS03415 44284f7b7c98b72ab153dca5ff7e9fa8 185 Pfam PF03975 CheD chemotactic sensory transduction 53 150 7.8E-27 T 14-09-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMK01_RS03415 44284f7b7c98b72ab153dca5ff7e9fa8 185 PANTHER PTHR35147 10 185 1.2E-50 T 14-09-2016 AMK01_RS03415 44284f7b7c98b72ab153dca5ff7e9fa8 185 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 6 158 27.93 T 14-09-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AMK01_RS03415 44284f7b7c98b72ab153dca5ff7e9fa8 185 PANTHER PTHR35147:SF2 10 185 1.2E-50 T 14-09-2016 AMK01_RS11245 9ac2c9939e36b5450571a430f3fa04ec 205 SUPERFAMILY SSF50475 3 195 2.12E-46 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS11245 9ac2c9939e36b5450571a430f3fa04ec 205 PANTHER PTHR33798 1 204 5.3E-67 T 14-09-2016 AMK01_RS11245 9ac2c9939e36b5450571a430f3fa04ec 205 PANTHER PTHR33798:SF4 1 204 5.3E-67 T 14-09-2016 AMK01_RS11245 9ac2c9939e36b5450571a430f3fa04ec 205 Pfam PF01613 Flavin reductase like domain 23 163 3.9E-18 T 14-09-2016 IPR002563 Flavin reductase like domain GO:0010181 AMK01_RS11245 9ac2c9939e36b5450571a430f3fa04ec 205 SMART SM00903 21 172 6.7E-13 T 14-09-2016 IPR002563 Flavin reductase like domain GO:0010181 AMK01_RS11245 9ac2c9939e36b5450571a430f3fa04ec 205 Gene3D G3DSA:2.30.110.10 10 187 1.1E-62 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS14840 8561c85f5186e5734a24248a65ca1e0f 297 SUPERFAMILY SSF161098 17 292 2.8E-33 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14840 8561c85f5186e5734a24248a65ca1e0f 297 Gene3D G3DSA:1.10.3720.10 25 295 8.4E-30 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14840 8561c85f5186e5734a24248a65ca1e0f 297 PANTHER PTHR30193 14 297 6.8E-26 T 14-09-2016 AMK01_RS14840 8561c85f5186e5734a24248a65ca1e0f 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 290 6.4E-7 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07945 d5caf82e6cd3c826dbce87c38eebfc72 154 PIRSF PIRSF002181 1 154 1.4E-51 T 14-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK01_RS07945 d5caf82e6cd3c826dbce87c38eebfc72 154 PANTHER PTHR11545 1 142 1.5E-69 T 14-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK01_RS07945 d5caf82e6cd3c826dbce87c38eebfc72 154 Pfam PF00572 Ribosomal protein L13 14 138 4.6E-53 T 14-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK01_RS07945 d5caf82e6cd3c826dbce87c38eebfc72 154 Gene3D G3DSA:3.90.1180.10 3 142 2.4E-62 T 14-09-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AMK01_RS07945 d5caf82e6cd3c826dbce87c38eebfc72 154 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 4.9E-60 T 14-09-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK01_RS07945 d5caf82e6cd3c826dbce87c38eebfc72 154 SUPERFAMILY SSF52161 5 144 1.7E-57 T 14-09-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AMK01_RS07945 d5caf82e6cd3c826dbce87c38eebfc72 154 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 28.213 T 14-09-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK01_RS00355 18d10b8f6ed9ce8b98c046771c333823 340 Gene3D G3DSA:3.90.25.10 191 332 4.2E-54 T 14-09-2016 AMK01_RS00355 18d10b8f6ed9ce8b98c046771c333823 340 PANTHER PTHR10366 24 331 4.1E-139 T 14-09-2016 AMK01_RS00355 18d10b8f6ed9ce8b98c046771c333823 340 SUPERFAMILY SSF51735 24 329 2.06E-81 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00355 18d10b8f6ed9ce8b98c046771c333823 340 Gene3D G3DSA:3.40.50.720 24 190 7.9E-53 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00355 18d10b8f6ed9ce8b98c046771c333823 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 26 322 2.4E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00355 18d10b8f6ed9ce8b98c046771c333823 340 PANTHER PTHR10366:SF399 24 331 4.1E-139 T 14-09-2016 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 PANTHER PTHR11963:SF13 41 490 3.7E-185 T 14-09-2016 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 342 349 - T 14-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 Gene3D G3DSA:3.40.220.10 4 154 7.4E-25 T 14-09-2016 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 181 486 2.7E-119 T 14-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 SUPERFAMILY SSF52949 4 180 4.0E-22 T 14-09-2016 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 SUPERFAMILY SSF53187 175 491 8.79E-120 T 14-09-2016 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 PRINTS PR00481 Cytosol aminopeptidase signature 367 382 2.3E-50 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 PRINTS PR00481 Cytosol aminopeptidase signature 257 274 2.3E-50 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 PRINTS PR00481 Cytosol aminopeptidase signature 338 358 2.3E-50 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 PRINTS PR00481 Cytosol aminopeptidase signature 279 300 2.3E-50 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 PRINTS PR00481 Cytosol aminopeptidase signature 316 337 2.3E-50 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 36 143 9.5E-21 T 14-09-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 35.116 T 14-09-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 Gene3D G3DSA:3.40.630.10 167 493 3.2E-134 T 14-09-2016 AMK01_RS07455 16343686388992b4c159637de7a0dd87 497 PANTHER PTHR11963 41 490 3.7E-185 T 14-09-2016 AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 215 243 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 Gene3D G3DSA:1.10.3130.10 19 140 7.1E-48 T 14-09-2016 AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 Pfam PF06426 Serine acetyltransferase, N-terminal 22 126 9.8E-35 T 14-09-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 PANTHER PTHR23416 19 271 8.5E-127 T 14-09-2016 AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 206 240 1.3E-6 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 SMART SM00971 22 126 9.8E-57 T 14-09-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 95 255 2.0E-66 T 14-09-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 SUPERFAMILY SSF51161 21 272 3.88E-64 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 Gene3D G3DSA:2.160.10.10 141 261 3.9E-31 T 14-09-2016 AMK01_RS09625 c0f332299c81f9d98d262071f60e6687 277 PANTHER PTHR23416:SF2 19 271 8.5E-127 T 14-09-2016 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 PANTHER PTHR11451 1 291 4.6E-40 T 14-09-2016 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 Gene3D G3DSA:3.40.50.620 208 257 7.9E-40 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 Gene3D G3DSA:3.40.50.620 10 74 7.9E-40 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 Gene3D G3DSA:3.90.800.10 75 203 2.2E-17 T 14-09-2016 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 271 1.9E-47 T 14-09-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 SUPERFAMILY SSF52374 9 291 5.63E-77 T 14-09-2016 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 12 24 2.6E-15 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 26 37 2.6E-15 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 2.6E-15 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 222 230 2.6E-15 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 54 2.6E-15 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS19465 756e657592d22a490c6b15c0475358c5 293 PANTHER PTHR11451:SF41 1 291 4.6E-40 T 14-09-2016 AMK01_RS15495 73880a61d206fe2c49f577879bfb0259 310 SUPERFAMILY SSF56219 86 306 1.16E-22 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS15495 73880a61d206fe2c49f577879bfb0259 310 Gene3D G3DSA:3.60.10.10 93 243 3.3E-5 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS15495 73880a61d206fe2c49f577879bfb0259 310 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 98 299 3.8E-12 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS16580 c74bbae11e2056d8525a0c0566c1f3dd 383 Gene3D G3DSA:3.40.50.2000 184 349 1.7E-29 T 14-09-2016 AMK01_RS16580 c74bbae11e2056d8525a0c0566c1f3dd 383 SUPERFAMILY SSF53756 65 375 6.57E-64 T 14-09-2016 AMK01_RS16580 c74bbae11e2056d8525a0c0566c1f3dd 383 Pfam PF00534 Glycosyl transferases group 1 184 350 1.7E-28 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS16580 c74bbae11e2056d8525a0c0566c1f3dd 383 Pfam PF13439 Glycosyltransferase Family 4 73 181 1.6E-11 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK01_RS16580 c74bbae11e2056d8525a0c0566c1f3dd 383 PANTHER PTHR12526 83 382 1.7E-54 T 14-09-2016 AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 223 228 - T 14-09-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 SUPERFAMILY SSF47781 70 133 6.23E-7 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 Gene3D G3DSA:1.10.150.20 97 130 1.5E-5 T 14-09-2016 AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 PANTHER PTHR30471 48 274 4.7E-76 T 14-09-2016 AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 TIGRFAM TIGR00608 radc: DNA repair protein RadC 61 269 2.2E-69 T 14-09-2016 IPR001405 RadC protein AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 Pfam PF04002 RadC-like JAB domain 154 270 4.9E-45 T 14-09-2016 IPR025657 RadC-like JAB domain AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 SUPERFAMILY SSF102712 199 240 1.15E-5 T 14-09-2016 AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 Gene3D G3DSA:3.40.140.10 150 271 3.6E-50 T 14-09-2016 AMK01_RS09345 c454738e35d4b2d813e9b6ec35ba87aa 274 PANTHER PTHR30471:SF3 48 274 4.7E-76 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 SUPERFAMILY SSF54292 1 68 2.71E-17 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 Gene3D G3DSA:3.40.50.740 379 416 6.3E-47 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 Gene3D G3DSA:3.40.50.740 280 347 6.3E-47 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 Gene3D G3DSA:3.40.50.740 504 632 6.3E-47 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 Pfam PF00384 Molybdopterin oxidoreductase 280 603 2.1E-68 T 14-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 636 680 4.7E-16 T 14-09-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 Gene3D G3DSA:3.10.20.30 4 65 1.3E-7 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 107 119 - T 14-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 PANTHER PTHR11615 361 682 4.4E-288 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 601 1.9E-220 T 14-09-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 92 131 5.6E-18 T 14-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 PANTHER PTHR11615:SF115 3 324 4.4E-288 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 SMART SM00929 92 132 3.1E-22 T 14-09-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 69 1.6E-11 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 SUPERFAMILY SSF53706 222 635 9.91E-101 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 154 164 - T 14-09-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 PANTHER PTHR11615 3 324 4.4E-288 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 SUPERFAMILY SSF54862 84 220 6.7E-39 T 14-09-2016 AMK01_RS08130 3a30c1ec37d80b5c97d94f187f0a97aa 693 PANTHER PTHR11615:SF115 361 682 4.4E-288 T 14-09-2016 AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 PIRSF PIRSF036773 1 188 2.5E-72 T 14-09-2016 AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 SMART SM00932 3 88 1.9E-50 T 14-09-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 SUPERFAMILY SSF110836 1 90 6.54E-30 T 14-09-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 88 1.8E-31 T 14-09-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 PANTHER PTHR11178:SF1 1 186 9.5E-93 T 14-09-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 PANTHER PTHR11178 1 186 9.5E-93 T 14-09-2016 AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 124 187 9.0E-29 T 14-09-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 SUPERFAMILY SSF117916 106 187 1.59E-26 T 14-09-2016 AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 Pfam PF01106 NifU-like domain 120 186 5.2E-28 T 14-09-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMK01_RS02100 abba065df0a0f190677ee0ce0ed24f65 188 Gene3D G3DSA:3.30.1370.70 1 90 4.1E-34 T 14-09-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMK01_RS18185 8b68b873944de93ab73bea0b3796d842 109 Gene3D G3DSA:3.30.750.24 11 95 6.3E-7 T 14-09-2016 IPR002645 STAS domain AMK01_RS18185 8b68b873944de93ab73bea0b3796d842 109 Pfam PF13466 STAS domain 11 90 1.4E-8 T 14-09-2016 IPR002645 STAS domain AMK01_RS14630 304b701be9a72520c03dcf686f006c01 366 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-09-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14630 304b701be9a72520c03dcf686f006c01 366 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 366 2.3E-119 T 14-09-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14630 304b701be9a72520c03dcf686f006c01 366 Pfam PF00953 Glycosyl transferase family 4 100 289 1.9E-30 T 14-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14630 304b701be9a72520c03dcf686f006c01 366 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 24 364 23.976 T 14-09-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14630 304b701be9a72520c03dcf686f006c01 366 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.8E-5 T 14-09-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14630 304b701be9a72520c03dcf686f006c01 366 ProSitePatterns PS01348 MraY family signature 2. 195 206 - T 14-09-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS14630 304b701be9a72520c03dcf686f006c01 366 PANTHER PTHR22926:SF5 2 366 5.6E-149 T 14-09-2016 AMK01_RS14630 304b701be9a72520c03dcf686f006c01 366 PANTHER PTHR22926 2 366 5.6E-149 T 14-09-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS03915 c9a3079d828bdba530656db8086e8e25 265 PANTHER PTHR22916 1 231 8.8E-62 T 14-09-2016 AMK01_RS03915 c9a3079d828bdba530656db8086e8e25 265 PANTHER PTHR22916:SF4 1 231 8.8E-62 T 14-09-2016 AMK01_RS03915 c9a3079d828bdba530656db8086e8e25 265 SUPERFAMILY SSF53448 11 215 4.69E-46 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS03915 c9a3079d828bdba530656db8086e8e25 265 Pfam PF00535 Glycosyl transferase family 2 14 132 8.9E-21 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS03915 c9a3079d828bdba530656db8086e8e25 265 Gene3D G3DSA:3.90.550.10 11 236 2.6E-44 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS20515 3ee8958850e30bcbc43df37d8dff892f 249 Gene3D G3DSA:3.40.50.300 4 230 2.8E-76 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20515 3ee8958850e30bcbc43df37d8dff892f 249 PANTHER PTHR24220 6 242 2.7E-92 T 14-09-2016 AMK01_RS20515 3ee8958850e30bcbc43df37d8dff892f 249 SUPERFAMILY SSF52540 4 228 9.37E-67 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20515 3ee8958850e30bcbc43df37d8dff892f 249 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20515 3ee8958850e30bcbc43df37d8dff892f 249 Pfam PF00005 ABC transporter 20 167 1.4E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20515 3ee8958850e30bcbc43df37d8dff892f 249 PANTHER PTHR24220:SF81 6 242 2.7E-92 T 14-09-2016 AMK01_RS20515 3ee8958850e30bcbc43df37d8dff892f 249 SMART SM00382 29 216 7.7E-20 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 PANTHER PTHR30293:SF0 1 312 4.1E-127 T 14-09-2016 AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.8E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.8E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.8E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 Gene3D G3DSA:3.40.190.10 92 173 8.4E-9 T 14-09-2016 AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 PANTHER PTHR30293 1 312 4.1E-127 T 14-09-2016 AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 Gene3D G3DSA:3.40.190.10 174 269 1.6E-16 T 14-09-2016 AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 Pfam PF03466 LysR substrate binding domain 90 296 1.4E-32 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 SUPERFAMILY SSF53850 91 301 4.89E-31 T 14-09-2016 AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 Gene3D G3DSA:1.10.10.10 2 84 1.9E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 SUPERFAMILY SSF46785 4 87 5.44E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09975 6084343f7631521796ee2cbe571d20e9 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.4E-20 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS14685 e865effd1fef3c68ede5d640a3b6c381 253 PANTHER PTHR30417 15 251 3.3E-66 T 14-09-2016 AMK01_RS14685 e865effd1fef3c68ede5d640a3b6c381 253 SMART SM00644 16 153 4.1E-38 T 14-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK01_RS14685 e865effd1fef3c68ede5d640a3b6c381 253 Pfam PF01471 Putative peptidoglycan binding domain 187 242 5.3E-12 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS14685 e865effd1fef3c68ede5d640a3b6c381 253 SUPERFAMILY SSF47090 182 246 4.12E-16 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS14685 e865effd1fef3c68ede5d640a3b6c381 253 SUPERFAMILY SSF55846 13 169 5.76E-54 T 14-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK01_RS14685 e865effd1fef3c68ede5d640a3b6c381 253 Gene3D G3DSA:1.10.101.10 176 244 3.0E-11 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS14685 e865effd1fef3c68ede5d640a3b6c381 253 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 26 153 1.1E-24 T 14-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK01_RS14685 e865effd1fef3c68ede5d640a3b6c381 253 Gene3D G3DSA:3.40.80.10 7 172 2.9E-57 T 14-09-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK01_RS08040 4ab3e672c36349f8c228aa63dd7ba987 299 PANTHER PTHR22911:SF56 1 299 4.5E-65 T 14-09-2016 AMK01_RS08040 4ab3e672c36349f8c228aa63dd7ba987 299 PANTHER PTHR22911 1 299 4.5E-65 T 14-09-2016 AMK01_RS08040 4ab3e672c36349f8c228aa63dd7ba987 299 SUPERFAMILY SSF103481 51 151 2.09E-12 T 14-09-2016 AMK01_RS08040 4ab3e672c36349f8c228aa63dd7ba987 299 SUPERFAMILY SSF103481 204 293 1.44E-8 T 14-09-2016 AMK01_RS08040 4ab3e672c36349f8c228aa63dd7ba987 299 Pfam PF00892 EamA-like transporter family 157 288 2.2E-7 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS08040 4ab3e672c36349f8c228aa63dd7ba987 299 Pfam PF00892 EamA-like transporter family 16 148 6.2E-11 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 SUPERFAMILY SSF55120 1 252 6.33E-82 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 PIRSF PIRSF001430 1 261 3.9E-70 T 14-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 Pfam PF01416 tRNA pseudouridine synthase 8 106 1.3E-11 T 14-09-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 Pfam PF01416 tRNA pseudouridine synthase 146 248 2.5E-29 T 14-09-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 PANTHER PTHR11142 1 249 1.4E-84 T 14-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 PANTHER PTHR11142:SF0 1 249 1.4E-84 T 14-09-2016 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 Gene3D G3DSA:3.30.70.580 1 108 3.4E-32 T 14-09-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 Gene3D G3DSA:3.30.70.660 110 245 2.1E-47 T 14-09-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 247 32.667 T 14-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS02280 7ccc158e0d64cd2d13f381865748d099 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 241 5.3E-56 T 14-09-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS14240 617e63ded1388a359725269bc4fb9e7e 138 PANTHER PTHR38599 2 135 9.0E-38 T 14-09-2016 AMK01_RS14240 617e63ded1388a359725269bc4fb9e7e 138 Gene3D G3DSA:2.60.120.10 25 128 8.3E-15 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS14240 617e63ded1388a359725269bc4fb9e7e 138 Pfam PF07883 Cupin domain 50 123 7.7E-12 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS14240 617e63ded1388a359725269bc4fb9e7e 138 PANTHER PTHR38599:SF1 2 135 9.0E-38 T 14-09-2016 AMK01_RS14240 617e63ded1388a359725269bc4fb9e7e 138 SUPERFAMILY SSF51182 28 130 7.09E-16 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 PANTHER PTHR26402 6 237 3.2E-60 T 14-09-2016 AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 PANTHER PTHR26402:SF292 6 237 3.2E-60 T 14-09-2016 AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 Gene3D G3DSA:3.40.50.2300 4 133 3.2E-33 T 14-09-2016 AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 SMART SM00862 161 237 3.0E-20 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 SMART SM00448 6 116 5.6E-31 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 237 4.1E-21 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 SUPERFAMILY SSF46894 138 238 2.64E-22 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 SUPERFAMILY SSF52172 4 128 2.42E-33 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 Pfam PF00072 Response regulator receiver domain 8 117 1.3E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS10915 cc72cc66e6fe23d51334ebf5487cdc9b 246 Gene3D G3DSA:1.10.10.10 141 238 3.1E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 Pfam PF01471 Putative peptidoglycan binding domain 314 372 2.1E-6 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 Gene3D G3DSA:2.40.440.10 507 557 1.3E-9 T 14-09-2016 AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 Gene3D G3DSA:2.40.440.10 398 446 1.3E-9 T 14-09-2016 AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 Gene3D G3DSA:1.10.101.10 298 372 1.2E-11 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 PANTHER PTHR41533:SF1 137 624 5.1E-73 T 14-09-2016 AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 SUPERFAMILY SSF141523 505 557 3.92E-19 T 14-09-2016 AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 SUPERFAMILY SSF141523 399 455 3.92E-19 T 14-09-2016 AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 PANTHER PTHR41533 137 624 5.1E-73 T 14-09-2016 AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 Pfam PF03734 L,D-transpeptidase catalytic domain 401 563 1.8E-28 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS12160 b4ec2bf5526894444f9068c989f88b91 633 SUPERFAMILY SSF47090 295 372 5.57E-8 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS28345 0b7d3b708161de576da49da1effae035 223 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 144 153 - T 14-09-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AMK01_RS28345 0b7d3b708161de576da49da1effae035 223 Gene3D G3DSA:3.20.20.80 22 223 8.6E-64 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS28345 0b7d3b708161de576da49da1effae035 223 PANTHER PTHR34142 23 223 5.9E-54 T 14-09-2016 AMK01_RS28345 0b7d3b708161de576da49da1effae035 223 SUPERFAMILY SSF51445 23 223 6.63E-54 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS28345 0b7d3b708161de576da49da1effae035 223 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 26 223 6.2E-37 T 14-09-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 SUPERFAMILY SSF46689 280 330 7.17E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 SMART SM00342 245 327 3.8E-22 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 Pfam PF12833 Helix-turn-helix domain 249 328 1.4E-21 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 SUPERFAMILY SSF46689 228 277 1.03E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 SUPERFAMILY SSF52317 20 208 1.17E-45 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 PANTHER PTHR11019:SF68 20 330 5.0E-100 T 14-09-2016 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 Gene3D G3DSA:1.10.10.60 282 329 6.3E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 Pfam PF01965 DJ-1/PfpI family 20 186 1.3E-15 T 14-09-2016 IPR002818 DJ-1/PfpI AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 Gene3D G3DSA:1.10.10.60 228 281 1.8E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 PANTHER PTHR11019 20 330 5.0E-100 T 14-09-2016 AMK01_RS16900 b71e8c33e425f73083fb627de9bb4524 332 Gene3D G3DSA:3.40.50.880 20 208 7.6E-49 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS07230 efa5aaf703155dfcd617ddf4b3af2be5 688 Gene3D G3DSA:3.10.350.10 622 665 5.5E-6 T 14-09-2016 IPR018392 LysM domain AMK01_RS07230 efa5aaf703155dfcd617ddf4b3af2be5 688 Pfam PF01476 LysM domain 621 664 1.1E-5 T 14-09-2016 IPR018392 LysM domain AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 SUPERFAMILY SSF47384 221 302 2.35E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 Pfam PF08521 Two-component sensor kinase N-terminal 20 162 7.5E-38 T 14-09-2016 IPR013727 Two-component sensor kinase, N-terminal AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 PANTHER PTHR24423 180 456 3.7E-57 T 14-09-2016 AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 SMART SM00387 350 460 5.8E-21 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 SMART SM00388 238 303 3.4E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 PANTHER PTHR24423:SF474 180 456 3.7E-57 T 14-09-2016 AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 Gene3D G3DSA:3.30.565.10 308 456 1.8E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 Gene3D G3DSA:1.10.287.130 231 299 1.5E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 3.2E-6 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 3.2E-6 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 302 7.5E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 447 8.4E-15 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS18510 985defe3a0c6a2a2178a478ecd21e79c 460 SUPERFAMILY SSF55874 294 447 5.89E-27 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12600 d9b2cca3baa752fc3f78c66925493bf0 204 Pfam PF13529 Peptidase_C39 like family 5 173 1.9E-5 T 14-09-2016 AMK01_RS04105 a80934dbd26af115851e80d0e1462759 457 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 10 457 6.0E-185 T 14-09-2016 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 AMK01_RS04105 a80934dbd26af115851e80d0e1462759 457 PANTHER PTHR34378:SF1 15 457 4.9E-219 T 14-09-2016 AMK01_RS04105 a80934dbd26af115851e80d0e1462759 457 SUPERFAMILY SSF55931 26 267 1.86E-60 T 14-09-2016 AMK01_RS04105 a80934dbd26af115851e80d0e1462759 457 SUPERFAMILY SSF55931 307 453 1.86E-60 T 14-09-2016 AMK01_RS04105 a80934dbd26af115851e80d0e1462759 457 PANTHER PTHR34378 15 457 4.9E-219 T 14-09-2016 AMK01_RS04105 a80934dbd26af115851e80d0e1462759 457 PIRSF PIRSF017901 1 457 4.8E-173 T 14-09-2016 AMK01_RS04105 a80934dbd26af115851e80d0e1462759 457 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 50 361 1.8E-80 T 14-09-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMK01_RS00905 26da51442c620710fb0a811018b65377 138 Pfam PF01047 MarR family 29 85 3.7E-14 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS00905 26da51442c620710fb0a811018b65377 138 SUPERFAMILY SSF46785 6 135 2.1E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00905 26da51442c620710fb0a811018b65377 138 PANTHER PTHR33164 26 138 3.7E-22 T 14-09-2016 AMK01_RS00905 26da51442c620710fb0a811018b65377 138 Gene3D G3DSA:1.10.10.10 6 136 1.1E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00905 26da51442c620710fb0a811018b65377 138 SMART SM00347 21 121 4.1E-18 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS00905 26da51442c620710fb0a811018b65377 138 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 14-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK01_RS00905 26da51442c620710fb0a811018b65377 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 1.6E-8 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS00905 26da51442c620710fb0a811018b65377 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 1.6E-8 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS00905 26da51442c620710fb0a811018b65377 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 1.6E-8 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS00905 26da51442c620710fb0a811018b65377 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 1.6E-8 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 3.7E-49 T 14-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 301 7.2E-115 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 299 9.0E-50 T 14-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 2.0E-29 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 2.0E-29 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 2.0E-29 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 2.0E-29 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 2.0E-29 T 14-09-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 SUPERFAMILY SSF53671 2 302 5.76E-105 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 Gene3D G3DSA:3.40.50.1370 141 288 6.5E-61 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 3.7E-29 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 3.7E-29 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 3.7E-29 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 3.7E-29 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PANTHER PTHR11405 1 302 2.5E-140 T 14-09-2016 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 Gene3D G3DSA:3.40.50.1370 2 140 7.7E-56 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 302 78.378 T 14-09-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK01_RS02755 2a7fc094ea160bf619959ce63c1b201c 304 PANTHER PTHR11405:SF1 1 302 2.5E-140 T 14-09-2016 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 Gene3D G3DSA:3.30.479.20 57 150 9.0E-18 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 PANTHER PTHR11741 1 308 2.2E-140 T 14-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-09-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-09-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 Gene3D G3DSA:1.10.8.10 3 55 3.5E-29 T 14-09-2016 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 Pfam PF00889 Elongation factor TS 71 289 1.9E-66 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 SUPERFAMILY SSF54713 150 307 8.63E-44 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 Hamap MF_00050 Elongation factor Ts [tsf]. 1 306 77.762 T 14-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 SUPERFAMILY SSF54713 57 145 2.35E-21 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 Gene3D G3DSA:3.30.479.20 247 287 6.5E-20 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 Gene3D G3DSA:3.30.479.20 151 198 6.5E-20 T 14-09-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 SUPERFAMILY SSF46934 4 55 2.82E-20 T 14-09-2016 IPR009060 UBA-like GO:0005515 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 Gene3D G3DSA:1.10.286.20 203 246 6.4E-21 T 14-09-2016 AMK01_RS09700 a4330666a1e0dc0c70de6f6acfe54d37 308 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 307 4.5E-92 T 14-09-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 PIRSF PIRSF001223 1 100 1.2E-49 T 14-09-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 Gene3D G3DSA:3.30.280.10 1 100 1.4E-49 T 14-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 PANTHER PTHR33569 2 100 2.5E-42 T 14-09-2016 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 1.2E-47 T 14-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 5.0E-45 T 14-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 Pfam PF00547 Urease, gamma subunit 1 99 2.6E-47 T 14-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 PANTHER PTHR33569:SF1 2 100 2.5E-42 T 14-09-2016 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 SUPERFAMILY SSF54111 1 100 3.53E-45 T 14-09-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17015 f5bad3259a1abea2ae424106c7ed8c1f 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.951 T 14-09-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 3 55 1.0E-18 T 14-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 PANTHER PTHR11615:SF119 4 715 2.3E-218 T 14-09-2016 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 SUPERFAMILY SSF50692 553 697 1.22E-42 T 14-09-2016 IPR009010 Aspartate decarboxylase-like domain AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Pfam PF01568 Molydopterin dinucleotide binding domain 581 691 4.4E-28 T 14-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Gene3D G3DSA:3.40.228.10 131 316 2.8E-55 T 14-09-2016 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Pfam PF00384 Molybdopterin oxidoreductase 68 481 1.6E-74 T 14-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 7 24 - T 14-09-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 SUPERFAMILY SSF53706 4 568 5.37E-189 T 14-09-2016 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Gene3D G3DSA:3.40.50.740 60 130 1.4E-88 T 14-09-2016 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Gene3D G3DSA:3.40.50.740 317 565 1.4E-88 T 14-09-2016 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 PANTHER PTHR11615 4 715 2.3E-218 T 14-09-2016 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Gene3D G3DSA:2.20.25.90 4 54 2.4E-21 T 14-09-2016 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Gene3D G3DSA:2.40.40.20 574 697 7.9E-41 T 14-09-2016 AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 Pfam PF04324 BFD-like [2Fe-2S] binding domain 829 878 9.5E-12 T 14-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain AMK01_RS08995 e606d933205faeb39a95ce3591679df0 885 SMART SM00926 2 56 5.9E-21 T 14-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 465 1.2E-22 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 PRINTS PR00419 Adrenodoxin reductase family signature 147 169 4.8E-23 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 PRINTS PR00419 Adrenodoxin reductase family signature 170 183 4.8E-23 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 PRINTS PR00419 Adrenodoxin reductase family signature 212 222 4.8E-23 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 4.8E-23 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 Gene3D G3DSA:3.40.50.720 149 235 9.9E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 Gene3D G3DSA:3.40.50.720 414 481 9.9E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 SUPERFAMILY SSF46548 2 156 8.89E-37 T 14-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 1.6E-25 T 14-09-2016 IPR028261 Dihydroprymidine dehydrogenase domain II AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 SUPERFAMILY SSF51971 371 481 1.77E-9 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 PANTHER PTHR11938 341 477 4.0E-115 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 PANTHER PTHR11938 9 325 4.0E-115 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 PANTHER PTHR11938:SF75 341 477 4.0E-115 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 PANTHER PTHR11938:SF75 9 325 4.0E-115 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 SUPERFAMILY SSF51971 144 403 7.65E-65 T 14-09-2016 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 483 1.9E-184 T 14-09-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 Gene3D G3DSA:3.50.50.60 236 403 3.9E-37 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18390 81d940fb10522378271d6ef4e82b8bf3 484 Gene3D G3DSA:1.10.1060.10 3 148 4.6E-40 T 14-09-2016 AMK01_RS12585 4c8a20bfebe1ae13882c4317ab5e8a2e 410 SUPERFAMILY SSF53850 22 406 5.72E-44 T 14-09-2016 AMK01_RS12585 4c8a20bfebe1ae13882c4317ab5e8a2e 410 Gene3D G3DSA:3.40.190.10 159 343 6.5E-19 T 14-09-2016 AMK01_RS12585 4c8a20bfebe1ae13882c4317ab5e8a2e 410 Gene3D G3DSA:3.40.190.10 30 158 1.6E-11 T 14-09-2016 AMK01_RS12585 4c8a20bfebe1ae13882c4317ab5e8a2e 410 PANTHER PTHR30061:SF22 1 346 1.6E-50 T 14-09-2016 AMK01_RS12585 4c8a20bfebe1ae13882c4317ab5e8a2e 410 Pfam PF01547 Bacterial extracellular solute-binding protein 39 313 1.6E-22 T 14-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK01_RS12585 4c8a20bfebe1ae13882c4317ab5e8a2e 410 PANTHER PTHR30061 1 346 1.6E-50 T 14-09-2016 AMK01_RS03930 62e961cecb2f0daee3261976ae5dcbea 368 PIRSF PIRSF000390 4 364 7.7E-98 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS03930 62e961cecb2f0daee3261976ae5dcbea 368 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 356 5.7E-106 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS03930 62e961cecb2f0daee3261976ae5dcbea 368 PANTHER PTHR30244 1 364 3.7E-104 T 14-09-2016 AMK01_RS03930 62e961cecb2f0daee3261976ae5dcbea 368 Gene3D G3DSA:3.90.1150.10 245 360 1.2E-24 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS03930 62e961cecb2f0daee3261976ae5dcbea 368 SUPERFAMILY SSF53383 17 359 4.62E-99 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS03930 62e961cecb2f0daee3261976ae5dcbea 368 Gene3D G3DSA:3.40.640.10 15 243 4.3E-77 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS03930 62e961cecb2f0daee3261976ae5dcbea 368 PANTHER PTHR30244:SF13 1 364 3.7E-104 T 14-09-2016 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SUPERFAMILY SSF48452 197 455 4.01E-40 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 Pfam PF13432 Tetratricopeptide repeat 263 303 0.018 T 14-09-2016 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 Pfam PF13432 Tetratricopeptide repeat 370 428 1.1E-7 T 14-09-2016 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 Gene3D G3DSA:1.25.40.10 194 457 6.3E-60 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 Pfam PF13431 Tetratricopeptide repeat 213 244 4.2E-5 T 14-09-2016 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 8 160 1.4E-9 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SMART SM00028 259 292 0.0025 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SMART SM00028 394 427 0.0014 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SMART SM00028 225 258 0.029 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SMART SM00028 191 224 160.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SMART SM00028 361 393 220.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SMART SM00028 327 360 0.028 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SMART SM00028 293 326 12.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 Pfam PF13181 Tetratricopeptide repeat 327 358 0.12 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 PANTHER PTHR23083 204 457 1.1E-51 T 14-09-2016 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 PANTHER PTHR23083 111 122 1.1E-51 T 14-09-2016 AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 SUPERFAMILY SSF55073 6 161 4.24E-24 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS05350 659706d095d492e986f8a25625f6d771 460 Gene3D G3DSA:3.30.70.1230 7 160 2.3E-13 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS19380 944dfaa3b0be99f8dbe6a89572b44e3c 293 Pfam PF13616 PPIC-type PPIASE domain 133 226 4.9E-26 T 14-09-2016 AMK01_RS19380 944dfaa3b0be99f8dbe6a89572b44e3c 293 SUPERFAMILY SSF109998 26 164 8.63E-16 T 14-09-2016 IPR027304 Trigger factor/SurA domain AMK01_RS19380 944dfaa3b0be99f8dbe6a89572b44e3c 293 PANTHER PTHR10657 7 270 1.2E-47 T 14-09-2016 AMK01_RS19380 944dfaa3b0be99f8dbe6a89572b44e3c 293 Gene3D G3DSA:3.10.50.40 133 248 9.6E-48 T 14-09-2016 AMK01_RS19380 944dfaa3b0be99f8dbe6a89572b44e3c 293 SUPERFAMILY SSF54534 118 224 1.11E-33 T 14-09-2016 AMK01_RS19380 944dfaa3b0be99f8dbe6a89572b44e3c 293 PANTHER PTHR10657:SF11 7 270 1.2E-47 T 14-09-2016 AMK01_RS14480 bb00eabec68979399d51328dab7b34cb 208 Gene3D G3DSA:3.40.50.850 2 206 4.9E-64 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS14480 bb00eabec68979399d51328dab7b34cb 208 Pfam PF00857 Isochorismatase family 3 204 4.5E-30 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS14480 bb00eabec68979399d51328dab7b34cb 208 PANTHER PTHR11080 3 207 3.4E-66 T 14-09-2016 AMK01_RS14480 bb00eabec68979399d51328dab7b34cb 208 PANTHER PTHR11080:SF2 3 207 3.4E-66 T 14-09-2016 AMK01_RS14480 bb00eabec68979399d51328dab7b34cb 208 SUPERFAMILY SSF52499 2 207 5.1E-45 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 256 1.2E-52 T 14-09-2016 AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 198 3.7E-6 T 14-09-2016 AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PANTHER PTHR24322 15 146 1.4E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PANTHER PTHR24322 162 194 1.4E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 Gene3D G3DSA:3.40.50.720 2 258 3.7E-74 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 SUPERFAMILY SSF51735 9 256 4.6E-69 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.2E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.2E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.2E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.2E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.2E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.4E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 4.4E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19130 25866b9eb0cc4c7175c06dcc32556328 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 4.4E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17785 d476177c7159430eaf4f8696928ee1b8 287 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 274 1.1E-31 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS17785 d476177c7159430eaf4f8696928ee1b8 287 PANTHER PTHR11795:SF396 1 287 4.1E-59 T 14-09-2016 AMK01_RS17785 d476177c7159430eaf4f8696928ee1b8 287 PANTHER PTHR11795 1 287 4.1E-59 T 14-09-2016 AMK01_RS09655 d94088daff3c9d32f12b9562c3914a65 396 SUPERFAMILY SSF55729 191 356 6.36E-36 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09655 d94088daff3c9d32f12b9562c3914a65 396 Gene3D G3DSA:3.40.630.30 184 339 3.1E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09655 d94088daff3c9d32f12b9562c3914a65 396 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 389 1.1E-155 T 14-09-2016 IPR007434 Peptidogalycan biosysnthesis/recognition AMK01_RS09655 d94088daff3c9d32f12b9562c3914a65 396 PANTHER PTHR31384 53 321 1.4E-62 T 14-09-2016 AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 SUPERFAMILY SSF51338 34 97 7.78E-25 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 SUPERFAMILY SSF51338 528 576 7.78E-25 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 PANTHER PTHR22642 37 587 2.1E-161 T 14-09-2016 AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 Pfam PF07969 Amidohydrolase family 85 569 1.1E-116 T 14-09-2016 IPR013108 Amidohydrolase 3 AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 PANTHER PTHR22642:SF2 37 587 2.1E-161 T 14-09-2016 AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 SUPERFAMILY SSF51556 96 158 2.46E-41 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 SUPERFAMILY SSF51556 238 529 2.46E-41 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 Gene3D G3DSA:3.20.20.140 238 507 3.1E-18 T 14-09-2016 AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 Gene3D G3DSA:2.30.40.10 33 126 3.5E-17 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16375 102e1396aabe4e42357ee68363fda2d3 660 Gene3D G3DSA:2.30.40.10 508 569 7.2E-4 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS00025 e0eb581f6679d801ddfa1d993812aef4 203 Gene3D G3DSA:3.40.50.300 1 193 2.6E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00025 e0eb581f6679d801ddfa1d993812aef4 203 Pfam PF01121 Dephospho-CoA kinase 4 178 1.8E-37 T 14-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK01_RS00025 e0eb581f6679d801ddfa1d993812aef4 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 194 24.968 T 14-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK01_RS00025 e0eb581f6679d801ddfa1d993812aef4 203 PANTHER PTHR10695 1 201 4.0E-50 T 14-09-2016 AMK01_RS00025 e0eb581f6679d801ddfa1d993812aef4 203 SUPERFAMILY SSF52540 1 190 4.96E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00025 e0eb581f6679d801ddfa1d993812aef4 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 185 7.4E-36 T 14-09-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 SUPERFAMILY SSF52172 1 166 8.4E-35 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 PANTHER PTHR26402:SF578 1 223 2.2E-72 T 14-09-2016 AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 PANTHER PTHR26402 1 223 2.2E-72 T 14-09-2016 AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 Gene3D G3DSA:3.40.50.2300 1 124 9.6E-34 T 14-09-2016 AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 Pfam PF00072 Response regulator receiver domain 3 112 7.6E-24 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 8.1E-18 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 SMART SM00862 145 220 2.0E-17 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 Gene3D G3DSA:1.10.10.10 126 222 3.2E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13235 3bfd4332dc29c90a1040acc0bf5227f8 223 SMART SM00448 1 112 1.8E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82693 54 148 3.45E-22 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 Pfam PF00873 AcrB/AcrD/AcrF family 18 1014 8.3E-268 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82866 301 498 4.45E-47 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82714 711 795 9.02E-13 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82693 561 655 1.15E-18 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 6.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 Gene3D G3DSA:3.30.70.1430 54 153 5.8E-27 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 PANTHER PTHR32063 15 1051 0.0 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82714 197 274 2.88E-12 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 Gene3D G3DSA:3.30.2090.10 196 274 8.7E-13 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 Gene3D G3DSA:3.30.2090.10 711 796 1.4E-14 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82866 819 1015 1.57E-43 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82693 277 331 4.97E-20 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82693 151 195 4.97E-20 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 Gene3D G3DSA:3.30.70.1430 566 653 2.8E-14 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 Gene3D G3DSA:1.10.3850.10 283 500 5.7E-54 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 Gene3D G3DSA:1.10.3850.10 802 1016 4.4E-58 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82693 796 841 6.28E-10 T 14-09-2016 AMK01_RS14435 21cbcc63b76348f1adc6695068e4d8b5 1051 SUPERFAMILY SSF82693 664 709 6.28E-10 T 14-09-2016 AMK01_RS04385 0ddea6cc4a23f18c75b9b7bdfbe19cc7 324 Gene3D G3DSA:1.20.58.340 248 324 6.7E-27 T 14-09-2016 AMK01_RS04385 0ddea6cc4a23f18c75b9b7bdfbe19cc7 324 Pfam PF01544 CorA-like Mg2+ transporter protein 25 319 2.3E-50 T 14-09-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMK01_RS04385 0ddea6cc4a23f18c75b9b7bdfbe19cc7 324 SUPERFAMILY SSF143865 2 263 3.01E-36 T 14-09-2016 AMK01_RS04385 0ddea6cc4a23f18c75b9b7bdfbe19cc7 324 PANTHER PTHR21535 25 324 7.6E-98 T 14-09-2016 AMK01_RS04385 0ddea6cc4a23f18c75b9b7bdfbe19cc7 324 Gene3D G3DSA:1.20.58.340 131 204 8.0E-4 T 14-09-2016 AMK01_RS04385 0ddea6cc4a23f18c75b9b7bdfbe19cc7 324 PANTHER PTHR21535:SF37 25 324 7.6E-98 T 14-09-2016 AMK01_RS04385 0ddea6cc4a23f18c75b9b7bdfbe19cc7 324 Gene3D G3DSA:3.30.460.20 23 129 8.0E-4 T 14-09-2016 AMK01_RS04385 0ddea6cc4a23f18c75b9b7bdfbe19cc7 324 SUPERFAMILY SSF144083 259 322 1.44E-19 T 14-09-2016 AMK01_RS20065 5dfc7e848303ec1eeee624167b339043 97 Gene3D G3DSA:3.30.70.1060 1 92 7.2E-31 T 14-09-2016 AMK01_RS20065 5dfc7e848303ec1eeee624167b339043 97 PANTHER PTHR33606 1 97 5.6E-17 T 14-09-2016 AMK01_RS20065 5dfc7e848303ec1eeee624167b339043 97 SUPERFAMILY SSF54909 1 92 4.02E-27 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS20065 5dfc7e848303ec1eeee624167b339043 97 Pfam PF03795 YCII-related domain 1 89 5.0E-24 T 14-09-2016 IPR005545 YCII-related AMK01_RS03360 c45f297857688cc728420427692dc708 605 Gene3D G3DSA:3.40.50.720 441 576 4.3E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03360 c45f297857688cc728420427692dc708 605 PANTHER PTHR16254:SF17 1 409 6.6E-269 T 14-09-2016 AMK01_RS03360 c45f297857688cc728420427692dc708 605 PANTHER PTHR16254:SF17 434 594 6.6E-269 T 14-09-2016 AMK01_RS03360 c45f297857688cc728420427692dc708 605 Pfam PF00999 Sodium/hydrogen exchanger family 13 397 1.0E-79 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK01_RS03360 c45f297857688cc728420427692dc708 605 Pfam PF02254 TrkA-N domain 449 562 1.4E-23 T 14-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMK01_RS03360 c45f297857688cc728420427692dc708 605 PANTHER PTHR16254 1 409 6.6E-269 T 14-09-2016 AMK01_RS03360 c45f297857688cc728420427692dc708 605 SUPERFAMILY SSF51735 446 574 1.97E-27 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03360 c45f297857688cc728420427692dc708 605 PANTHER PTHR16254 434 594 6.6E-269 T 14-09-2016 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 SMART SM00865 210 328 4.9E-57 T 14-09-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 Pfam PF12327 FtsZ family, C-terminal domain 225 320 1.0E-37 T 14-09-2016 IPR024757 Cell division protein FtsZ, C-terminal AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 14 329 7.8E-120 T 14-09-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 SUPERFAMILY SSF52490 15 211 8.24E-69 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 Gene3D G3DSA:3.30.1330.20 218 322 1.1E-48 T 14-09-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 177 4.9E-39 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 381 36.854 T 14-09-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 Gene3D G3DSA:3.40.50.1440 16 217 1.5E-92 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 SMART SM00864 16 208 4.3E-108 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 PRINTS PR00423 Cell division protein FtsZ signature 101 121 2.8E-48 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 PRINTS PR00423 Cell division protein FtsZ signature 192 214 2.8E-48 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 PRINTS PR00423 Cell division protein FtsZ signature 215 236 2.8E-48 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 PRINTS PR00423 Cell division protein FtsZ signature 129 150 2.8E-48 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 14-09-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 PANTHER PTHR30314 1 384 5.7E-172 T 14-09-2016 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 TIGRFAM TIGR03483 FtsZ_alphas_C: cell division protein FtsZ, alphaProteobacterial C-terminal extension 462 575 3.9E-47 T 14-09-2016 IPR017844 Cell division protein FtsZ, C-terminal extension GO:0000910|GO:0005525|GO:0005737 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 PANTHER PTHR30314:SF3 1 384 5.7E-172 T 14-09-2016 AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 SUPERFAMILY SSF55307 210 322 3.89E-42 T 14-09-2016 IPR008280 Tubulin/FtsZ, C-terminal AMK01_RS14580 fd372e8c1a0bbabad0837e1d33b61aa2 575 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 14-09-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMK01_RS04630 34be41dc9c3309611737f88b68c3c664 149 Gene3D G3DSA:1.10.10.10 5 106 3.4E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04630 34be41dc9c3309611737f88b68c3c664 149 PANTHER PTHR33204:SF10 1 128 4.4E-41 T 14-09-2016 AMK01_RS04630 34be41dc9c3309611737f88b68c3c664 149 SUPERFAMILY SSF46785 3 136 2.73E-33 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04630 34be41dc9c3309611737f88b68c3c664 149 PANTHER PTHR33204 1 128 4.4E-41 T 14-09-2016 AMK01_RS04630 34be41dc9c3309611737f88b68c3c664 149 Pfam PF01638 HxlR-like helix-turn-helix 18 103 2.3E-21 T 14-09-2016 IPR002577 Helix-turn-helix, HxlR type AMK01_RS02225 994fdca057b9c3aadecb5c16feef0be9 301 PANTHER PTHR12715 10 299 3.3E-79 T 14-09-2016 AMK01_RS02225 994fdca057b9c3aadecb5c16feef0be9 301 SUPERFAMILY SSF103481 193 294 3.27E-12 T 14-09-2016 AMK01_RS02225 994fdca057b9c3aadecb5c16feef0be9 301 PANTHER PTHR12715:SF17 10 299 3.3E-79 T 14-09-2016 AMK01_RS02225 994fdca057b9c3aadecb5c16feef0be9 301 SUPERFAMILY SSF103481 45 144 3.14E-12 T 14-09-2016 AMK01_RS02225 994fdca057b9c3aadecb5c16feef0be9 301 Pfam PF00892 EamA-like transporter family 158 291 2.5E-15 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS02225 994fdca057b9c3aadecb5c16feef0be9 301 Pfam PF00892 EamA-like transporter family 13 144 1.5E-23 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PANTHER PTHR30009:SF0 472 658 8.1E-272 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-98 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.1E-98 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.1E-98 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.1E-98 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.1E-98 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.1E-98 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.1E-98 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.1E-98 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 640 3.9E-116 T 14-09-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PANTHER PTHR30009 472 658 8.1E-272 T 14-09-2016 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 643 2.0E-190 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 633 646 1.4E-70 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 1.4E-70 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.4E-70 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 1.4E-70 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.4E-70 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 1.4E-70 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.4E-70 T 14-09-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 Pfam PF01578 Cytochrome C assembly protein 89 295 3.6E-51 T 14-09-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PANTHER PTHR30009 1 417 8.1E-272 T 14-09-2016 AMK01_RS06590 54b291a474f7cdacd3f7e9f07cdf916d 664 PANTHER PTHR30009:SF0 1 417 8.1E-272 T 14-09-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20215 9bfa9218059ab836a9abac15d8b4fc53 101 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 3 96 24.89 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK01_RS20215 9bfa9218059ab836a9abac15d8b4fc53 101 Gene3D G3DSA:3.30.1360.20 2 96 6.7E-35 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK01_RS20215 9bfa9218059ab836a9abac15d8b4fc53 101 PANTHER PTHR12599 1 101 9.8E-38 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK01_RS20215 9bfa9218059ab836a9abac15d8b4fc53 101 SUPERFAMILY SSF55248 4 96 1.03E-32 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK01_RS20215 9bfa9218059ab836a9abac15d8b4fc53 101 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 94 4.0E-30 T 14-09-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AMK01_RS19715 673bfda75cfa7fec30c7db138c53940e 87 Pfam PF06169 Protein of unknown function (DUF982) 11 81 1.1E-13 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS15835 f93e9d133cd9b0952a5a4c10ca28a33d 421 PANTHER PTHR11384 75 400 3.9E-33 T 14-09-2016 AMK01_RS15835 f93e9d133cd9b0952a5a4c10ca28a33d 421 Pfam PF05992 SbmA/BacA-like family 84 397 8.9E-156 T 14-09-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 AMK01_RS15835 f93e9d133cd9b0952a5a4c10ca28a33d 421 PANTHER PTHR11384:SF3 75 400 3.9E-33 T 14-09-2016 AMK01_RS02530 23683d5ff072f124954a641ef7b6ad4a 260 Pfam PF00005 ABC transporter 22 180 1.2E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS02530 23683d5ff072f124954a641ef7b6ad4a 260 PANTHER PTHR24220 8 229 8.0E-73 T 14-09-2016 AMK01_RS02530 23683d5ff072f124954a641ef7b6ad4a 260 SMART SM00382 31 228 3.2E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS02530 23683d5ff072f124954a641ef7b6ad4a 260 PANTHER PTHR24220:SF575 8 229 8.0E-73 T 14-09-2016 AMK01_RS02530 23683d5ff072f124954a641ef7b6ad4a 260 SUPERFAMILY SSF52540 4 238 5.03E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02530 23683d5ff072f124954a641ef7b6ad4a 260 Gene3D G3DSA:3.40.50.300 3 247 1.4E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08955 99b7c21923bd8c88878ed912253a5c72 186 SUPERFAMILY SSF55729 44 166 1.35E-14 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS08955 99b7c21923bd8c88878ed912253a5c72 186 Gene3D G3DSA:3.40.630.30 65 166 8.3E-11 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 SUPERFAMILY SSF55103 232 468 2.62E-71 T 14-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 Gene3D G3DSA:3.30.43.10 18 108 3.1E-23 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 Gene3D G3DSA:1.10.45.10 428 466 2.2E-12 T 14-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 SUPERFAMILY SSF56176 20 227 2.8E-62 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 Gene3D G3DSA:3.30.465.10 109 227 3.1E-43 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 PANTHER PTHR11748 16 467 5.4E-238 T 14-09-2016 AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 PANTHER PTHR11748:SF97 16 467 5.4E-238 T 14-09-2016 AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 466 1.1E-67 T 14-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMK01_RS14395 8cdcf0ae951be72f443f06018f97a02b 470 Pfam PF01565 FAD binding domain 53 189 1.6E-35 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS13390 e13a3df32124754726437eb602b1e975 406 Pfam PF02687 FtsX-like permease family 276 393 1.0E-8 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK01_RS13390 e13a3df32124754726437eb602b1e975 406 Pfam PF12704 MacB-like periplasmic core domain 29 238 7.2E-12 T 14-09-2016 IPR025857 MacB-like periplasmic core domain AMK01_RS13390 e13a3df32124754726437eb602b1e975 406 PANTHER PTHR30572:SF12 11 402 3.0E-47 T 14-09-2016 AMK01_RS13390 e13a3df32124754726437eb602b1e975 406 PANTHER PTHR30572 11 402 3.0E-47 T 14-09-2016 AMK01_RS10130 5b0ee965c6a89e7552938cee096591b1 252 Pfam PF02586 SOS response associated peptidase (SRAP) 10 231 4.3E-17 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS10130 5b0ee965c6a89e7552938cee096591b1 252 PANTHER PTHR13604 91 233 5.1E-33 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS10130 5b0ee965c6a89e7552938cee096591b1 252 PANTHER PTHR13604 25 71 5.1E-33 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS10130 5b0ee965c6a89e7552938cee096591b1 252 Gene3D G3DSA:3.90.1680.10 1 231 1.2E-18 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS10130 5b0ee965c6a89e7552938cee096591b1 252 PANTHER PTHR13604:SF1 91 233 5.1E-33 T 14-09-2016 AMK01_RS10130 5b0ee965c6a89e7552938cee096591b1 252 SUPERFAMILY SSF143081 2 235 2.22E-63 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS10130 5b0ee965c6a89e7552938cee096591b1 252 PANTHER PTHR13604:SF1 25 71 5.1E-33 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 12 1361 0.0 T 14-09-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:2.40.50.100 725 801 3.7E-29 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Pfam PF04563 RNA polymerase beta subunit 29 507 3.2E-33 T 14-09-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856 752 939 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856 1056 1150 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856 350 735 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Pfam PF10385 RNA polymerase beta subunit external 1 domain 601 666 4.9E-22 T 14-09-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Pfam PF04561 RNA polymerase Rpb2, domain 2 179 231 2.4E-6 T 14-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Pfam PF04561 RNA polymerase Rpb2, domain 2 359 464 2.5E-18 T 14-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1364 12.426 T 14-09-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:2.30.150.10 602 666 3.4E-26 T 14-09-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1085 1097 - T 14-09-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:2.40.270.10 802 829 2.2E-87 T 14-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:2.40.270.10 1082 1264 2.2E-87 T 14-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856:SF20 1056 1150 0.0 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856:SF20 350 735 0.0 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Pfam PF00562 RNA polymerase Rpb2, domain 6 728 1286 6.9E-167 T 14-09-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:2.40.50.150 1067 1081 2.0E-58 T 14-09-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:2.40.50.150 836 946 2.0E-58 T 14-09-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 SUPERFAMILY SSF64484 13 234 0.0 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 SUPERFAMILY SSF64484 1061 1365 0.0 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 SUPERFAMILY SSF64484 353 948 0.0 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856:SF20 1 239 0.0 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856:SF20 1204 1368 0.0 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856 1 239 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856 1204 1368 0.0 T 14-09-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:3.90.1100.10 21 159 6.5E-148 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:3.90.1100.10 455 601 6.5E-148 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:3.90.1100.10 669 723 6.5E-148 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 PANTHER PTHR20856:SF20 752 939 0.0 T 14-09-2016 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Pfam PF04565 RNA polymerase Rpb2, domain 3 523 591 1.3E-31 T 14-09-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:3.90.1110.10 161 238 4.3E-71 T 14-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Gene3D G3DSA:3.90.1110.10 356 454 4.3E-71 T 14-09-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08410 004b9126aa769e7718556f72ca22cc53 1379 Pfam PF04560 RNA polymerase Rpb2, domain 7 1288 1362 2.0E-26 T 14-09-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 Gene3D G3DSA:3.40.50.300 30 192 2.9E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 SUPERFAMILY SSF52156 317 442 1.26E-37 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 472 13.471 T 14-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 Pfam PF11987 Translation-initiation factor 2 320 425 1.4E-40 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 2 471 3.8E-200 T 14-09-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 Gene3D G3DSA:2.40.30.10 204 297 1.7E-24 T 14-09-2016 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 Pfam PF00009 Elongation factor Tu GTP binding domain 38 194 1.1E-33 T 14-09-2016 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 PANTHER PTHR23115 17 363 1.8E-181 T 14-09-2016 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 SUPERFAMILY SSF50447 205 289 2.59E-26 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 PANTHER PTHR23115:SF184 17 363 1.8E-181 T 14-09-2016 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 PANTHER PTHR23115 389 470 1.8E-181 T 14-09-2016 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 SUPERFAMILY SSF50447 437 471 1.98E-7 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 35 192 8.7E-35 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 SUPERFAMILY SSF52540 30 205 6.37E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 PANTHER PTHR23115:SF184 389 470 1.8E-181 T 14-09-2016 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 Gene3D G3DSA:3.40.50.10050 336 414 4.4E-25 T 14-09-2016 IPR023115 Translation initiation factor IF- 2, domain 3 AMK01_RS25340 290a82a3f4c247c3cce772ac8a78401a 472 Gene3D G3DSA:2.40.30.10 437 471 5.6E-9 T 14-09-2016 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 Gene3D G3DSA:3.30.565.10 444 588 2.6E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PANTHER PTHR24423:SF451 349 588 1.8E-79 T 14-09-2016 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 SMART SM00388 372 440 7.0E-4 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 Gene3D G3DSA:1.10.287.130 374 436 1.4E-4 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 SUPERFAMILY SSF55874 431 588 3.01E-38 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 549 3.6E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 535 3.6E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 3.6E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 3.6E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PANTHER PTHR24423 349 588 1.8E-79 T 14-09-2016 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 SUPERFAMILY SSF47384 370 440 1.79E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 Gene3D G3DSA:3.30.450.20 92 167 4.8E-5 T 14-09-2016 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PANTHER PTHR24423:SF451 74 172 1.8E-79 T 14-09-2016 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 SMART SM00387 482 592 1.0E-28 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 437 1.6E-6 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 484 589 1.7E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 SUPERFAMILY SSF103190 46 180 1.16E-20 T 14-09-2016 IPR029151 Periplasmic sensor domain-like AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PANTHER PTHR24423 74 172 1.8E-79 T 14-09-2016 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 Pfam PF02743 Cache domain 25 205 2.7E-14 T 14-09-2016 IPR033479 Double Cache domain 1 AMK01_RS17725 53764f2488cca9d343c4c24403a2a6f5 600 PIRSF PIRSF036431 1 599 1.8E-206 T 14-09-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 3 720 0.0 T 14-09-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Gene3D G3DSA:3.20.20.360 334 586 3.7E-152 T 14-09-2016 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Gene3D G3DSA:3.20.20.360 264 294 3.7E-152 T 14-09-2016 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Gene3D G3DSA:3.20.20.360 87 133 3.7E-152 T 14-09-2016 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Gene3D G3DSA:1.10.1860.10 2 86 3.5E-31 T 14-09-2016 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 PANTHER PTHR21631 499 722 8.2E-140 T 14-09-2016 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 SUPERFAMILY SSF51645 2 721 5.62E-304 T 14-09-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 PANTHER PTHR21631:SF7 499 722 8.2E-140 T 14-09-2016 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Gene3D G3DSA:1.20.1220.12 588 721 9.2E-76 T 14-09-2016 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Pfam PF01274 Malate synthase 17 695 6.0E-183 T 14-09-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Hamap MF_00641 Malate synthase G [glcB]. 1 723 402.051 T 14-09-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Gene3D G3DSA:2.170.170.11 296 333 2.2E-61 T 14-09-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS00270 834e8e82bd582a86ca11869ec9ff984a 723 Gene3D G3DSA:2.170.170.11 134 262 2.2E-61 T 14-09-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 1.3E-11 T 14-09-2016 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 1.3E-11 T 14-09-2016 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 201 219 1.3E-11 T 14-09-2016 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 1.3E-11 T 14-09-2016 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 1.3E-11 T 14-09-2016 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 Pfam PF07690 Major Facilitator Superfamily 17 405 1.4E-44 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 PANTHER PTHR23501 7 486 3.3E-120 T 14-09-2016 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 Gene3D G3DSA:1.20.1250.20 12 193 1.8E-30 T 14-09-2016 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 SUPERFAMILY SSF103473 10 201 9.94E-66 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 SUPERFAMILY SSF103473 453 483 9.94E-66 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 SUPERFAMILY SSF103473 244 414 9.94E-66 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 Gene3D G3DSA:1.20.1250.20 262 486 1.5E-15 T 14-09-2016 AMK01_RS02675 cd977a84633feec0e56c16a27499d9fd 496 PANTHER PTHR23501:SF71 7 486 3.3E-120 T 14-09-2016 AMK01_RS11285 a82b48785b6f713a2afb5bdc6855973d 150 SUPERFAMILY SSF141734 24 128 1.83E-44 T 14-09-2016 AMK01_RS11285 a82b48785b6f713a2afb5bdc6855973d 150 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 69 121 6.0E-24 T 14-09-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 AMK01_RS11285 a82b48785b6f713a2afb5bdc6855973d 150 PANTHER PTHR21256 25 124 4.1E-52 T 14-09-2016 AMK01_RS11285 a82b48785b6f713a2afb5bdc6855973d 150 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 46 121 9.1E-34 T 14-09-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 AMK01_RS11285 a82b48785b6f713a2afb5bdc6855973d 150 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 20 125 30.199 T 14-09-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 328 6.0E-149 T 14-09-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 Gene3D G3DSA:3.30.160.20 192 269 3.2E-38 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 Pfam PF00472 RF-1 domain 193 302 2.8E-41 T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 209 225 - T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 SMART SM00937 49 159 8.8E-55 T 14-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 PANTHER PTHR11075 1 337 3.2E-158 T 14-09-2016 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 330 36.491 T 14-09-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 PANTHER PTHR11075:SF6 1 337 3.2E-158 T 14-09-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 Gene3D G3DSA:1.20.58.410 1 76 1.5E-19 T 14-09-2016 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 Pfam PF03462 PCRF domain 1 184 1.0E-55 T 14-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK01_RS08315 ba2b8e667ad62ef5122e0e12c353bad2 342 SUPERFAMILY SSF75620 2 330 3.27E-129 T 14-09-2016 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 SUPERFAMILY SSF51905 435 496 2.68E-56 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 SUPERFAMILY SSF51905 2 297 2.68E-56 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 Pfam PF00732 GMC oxidoreductase 200 297 2.0E-7 T 14-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 Pfam PF05199 GMC oxidoreductase 432 489 2.3E-13 T 14-09-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 PANTHER PTHR11552 6 495 2.7E-39 T 14-09-2016 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 PANTHER PTHR11552:SF139 6 495 2.7E-39 T 14-09-2016 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 Gene3D G3DSA:3.50.50.60 3 127 9.8E-59 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 Gene3D G3DSA:3.50.50.60 194 299 9.8E-59 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08700 66c9be5fda7a893988e14fe1bdb74158 512 Gene3D G3DSA:3.50.50.60 404 496 9.8E-59 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14920 63513cb348722e5743f5a4f4d08bee7d 247 PANTHER PTHR28047 1 232 2.2E-63 T 14-09-2016 AMK01_RS14920 63513cb348722e5743f5a4f4d08bee7d 247 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 209 2.1E-13 T 14-09-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14920 63513cb348722e5743f5a4f4d08bee7d 247 PANTHER PTHR28047:SF1 1 232 2.2E-63 T 14-09-2016 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 5.2E-9 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 5.2E-9 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 SUPERFAMILY SSF47384 219 290 7.85E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 437 4.4E-20 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 SMART SM00387 333 440 1.4E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 PANTHER PTHR24423:SF559 176 440 1.2E-47 T 14-09-2016 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 Gene3D G3DSA:3.30.565.10 281 439 2.2E-29 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 SMART SM00388 235 293 3.8E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 PANTHER PTHR24423 176 440 1.2E-47 T 14-09-2016 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 Gene3D G3DSA:1.10.287.130 225 280 4.1E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 Pfam PF00672 HAMP domain 164 230 1.1E-10 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 SMART SM00304 182 234 1.4E-5 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS12325 e60ba7317edd73a87f99d18b0c1e40ce 440 SUPERFAMILY SSF55874 299 439 1.07E-28 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS26270 390033ea76eec08b326da2237fae71ca 176 SUPERFAMILY SSF52833 5 108 1.68E-17 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS26270 390033ea76eec08b326da2237fae71ca 176 SUPERFAMILY SSF47616 74 176 7.25E-13 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS26270 390033ea76eec08b326da2237fae71ca 176 PANTHER PTHR11260 7 176 5.5E-46 T 14-09-2016 AMK01_RS26270 390033ea76eec08b326da2237fae71ca 176 Gene3D G3DSA:1.20.1050.10 102 176 3.2E-17 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS26270 390033ea76eec08b326da2237fae71ca 176 Gene3D G3DSA:3.40.30.10 4 101 8.6E-25 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS26270 390033ea76eec08b326da2237fae71ca 176 PANTHER PTHR11260:SF286 7 176 5.5E-46 T 14-09-2016 AMK01_RS26270 390033ea76eec08b326da2237fae71ca 176 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 80 2.6E-12 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 Pfam PF05681 Fumarate hydratase (Fumerase) 45 319 7.6E-86 T 14-09-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 Gene3D G3DSA:3.20.130.10 345 531 1.5E-72 T 14-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 PANTHER PTHR30389 3 533 0.0 T 14-09-2016 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 77 320 7.9E-32 T 14-09-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 PANTHER PTHR30389:SF0 3 533 0.0 T 14-09-2016 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 SUPERFAMILY SSF117457 355 530 3.4E-61 T 14-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 PIRSF PIRSF001394 24 535 4.2E-227 T 14-09-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 367 531 2.3E-56 T 14-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 Pfam PF05683 Fumarase C-terminus 326 531 5.5E-93 T 14-09-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMK01_RS12175 30c13f862bec5b48833c6a7f013a78ba 535 ProSitePatterns PS00163 Fumarate lyases signature. 450 459 - T 14-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 PANTHER PTHR30154 9 153 7.5E-48 T 14-09-2016 AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 5.1E-24 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 51 2.7E-12 T 14-09-2016 AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.7E-6 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.7E-6 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.7E-6 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 SUPERFAMILY SSF46785 7 85 1.81E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 SMART SM00344 9 113 7.5E-31 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 SUPERFAMILY SSF54909 65 153 3.75E-20 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 Gene3D G3DSA:1.10.10.10 9 54 4.9E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 Gene3D G3DSA:3.30.70.920 57 141 3.9E-28 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS08795 6e0a6a29e089f3e173e15ab10c1f5f31 153 PANTHER PTHR30154:SF17 9 153 7.5E-48 T 14-09-2016 AMK01_RS12755 4dff4a046bb4ef13f266271445de7f97 362 SMART SM00044 144 343 8.9E-5 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS12755 4dff4a046bb4ef13f266271445de7f97 362 SUPERFAMILY SSF55073 177 358 2.04E-42 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS12755 4dff4a046bb4ef13f266271445de7f97 362 PANTHER PTHR11920 149 357 3.2E-44 T 14-09-2016 AMK01_RS12755 4dff4a046bb4ef13f266271445de7f97 362 PANTHER PTHR11920:SF348 149 357 3.2E-44 T 14-09-2016 AMK01_RS12755 4dff4a046bb4ef13f266271445de7f97 362 Gene3D G3DSA:3.30.70.1230 178 357 1.1E-32 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS12755 4dff4a046bb4ef13f266271445de7f97 362 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 179 317 6.8E-21 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS07870 7fe3938783c30882b05cfe968da65967 297 SUPERFAMILY SSF161098 54 281 2.62E-56 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07870 7fe3938783c30882b05cfe968da65967 297 Gene3D G3DSA:1.10.3720.10 10 284 9.9E-58 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07870 7fe3938783c30882b05cfe968da65967 297 PANTHER PTHR30193:SF6 14 294 4.6E-74 T 14-09-2016 AMK01_RS07870 7fe3938783c30882b05cfe968da65967 297 PANTHER PTHR30193 14 294 4.6E-74 T 14-09-2016 AMK01_RS07870 7fe3938783c30882b05cfe968da65967 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 283 7.7E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15445 65403db1e5a01408a8167494c67e27c3 153 Gene3D G3DSA:3.40.630.30 7 151 3.7E-42 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS15445 65403db1e5a01408a8167494c67e27c3 153 SUPERFAMILY SSF55729 5 147 1.22E-25 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS15445 65403db1e5a01408a8167494c67e27c3 153 PANTHER PTHR23091 1 141 2.5E-16 T 14-09-2016 AMK01_RS15445 65403db1e5a01408a8167494c67e27c3 153 Pfam PF00583 Acetyltransferase (GNAT) family 58 141 1.9E-10 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS04065 070123dc3548a947aad148e2310cafe1 329 Pfam PF00753 Metallo-beta-lactamase superfamily 106 289 2.1E-20 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS04065 070123dc3548a947aad148e2310cafe1 329 PANTHER PTHR23200:SF42 17 303 6.2E-55 T 14-09-2016 AMK01_RS04065 070123dc3548a947aad148e2310cafe1 329 PANTHER PTHR23200 17 303 6.2E-55 T 14-09-2016 AMK01_RS04065 070123dc3548a947aad148e2310cafe1 329 Gene3D G3DSA:3.60.15.10 45 326 1.4E-49 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS04065 070123dc3548a947aad148e2310cafe1 329 SUPERFAMILY SSF56281 42 323 5.01E-45 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS04065 070123dc3548a947aad148e2310cafe1 329 SMART SM00849 101 302 1.7E-21 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 PANTHER PTHR30126 5 293 4.4E-60 T 14-09-2016 AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 PANTHER PTHR30126:SF29 5 293 4.4E-60 T 14-09-2016 AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 Pfam PF03466 LysR substrate binding domain 91 294 1.1E-23 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 SUPERFAMILY SSF46785 6 89 1.12E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 Gene3D G3DSA:3.40.190.10 183 258 1.4E-11 T 14-09-2016 AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 Gene3D G3DSA:1.10.10.10 6 89 5.7E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 SUPERFAMILY SSF53850 92 294 2.71E-27 T 14-09-2016 AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 Gene3D G3DSA:3.40.190.10 108 182 1.7E-8 T 14-09-2016 AMK01_RS09230 dece2ac9be36f1797e04ff79cb55a703 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.0E-20 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS19230 f1699eb4f8037cb0a3c116ade6a90e24 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 14-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS19230 f1699eb4f8037cb0a3c116ade6a90e24 502 Pfam PF00171 Aldehyde dehydrogenase family 23 489 1.3E-167 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS19230 f1699eb4f8037cb0a3c116ade6a90e24 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 290 301 - T 14-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS19230 f1699eb4f8037cb0a3c116ade6a90e24 502 SUPERFAMILY SSF53720 9 494 7.33E-162 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS19230 f1699eb4f8037cb0a3c116ade6a90e24 502 Gene3D G3DSA:3.40.605.10 13 265 5.4E-92 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS19230 f1699eb4f8037cb0a3c116ade6a90e24 502 PANTHER PTHR11699:SF97 8 502 0.0 T 14-09-2016 AMK01_RS19230 f1699eb4f8037cb0a3c116ade6a90e24 502 Gene3D G3DSA:3.40.309.10 266 465 2.4E-62 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS19230 f1699eb4f8037cb0a3c116ade6a90e24 502 PANTHER PTHR11699 8 502 0.0 T 14-09-2016 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 SMART SM00481 8 97 2.6E-7 T 14-09-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 Gene3D G3DSA:3.20.20.140 14 270 4.9E-6 T 14-09-2016 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 Pfam PF01336 OB-fold nucleic acid binding domain 1004 1078 9.1E-8 T 14-09-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 11 1039 9.2E-141 T 14-09-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 7 1150 13.356 T 14-09-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 Pfam PF14579 Helix-hairpin-helix motif 811 917 6.5E-23 T 14-09-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 PANTHER PTHR32294:SF4 3 830 0.0 T 14-09-2016 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 305 737 5.1E-133 T 14-09-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 Pfam PF02811 PHP domain 13 125 1.3E-6 T 14-09-2016 IPR004013 PHP domain GO:0003824 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 PANTHER PTHR32294:SF4 852 1115 0.0 T 14-09-2016 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 PANTHER PTHR32294 852 1115 0.0 T 14-09-2016 AMK01_RS20975 9133ee68b06dfb5948fa8ab84d871bdb 1150 PANTHER PTHR32294 3 830 0.0 T 14-09-2016 AMK01_RS29700 582211bd7d8fb452e103b9d61b54f1f7 265 Pfam PF00873 AcrB/AcrD/AcrF family 19 258 3.0E-30 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS29700 582211bd7d8fb452e103b9d61b54f1f7 265 SUPERFAMILY SSF82693 154 197 5.02E-5 T 14-09-2016 AMK01_RS29700 582211bd7d8fb452e103b9d61b54f1f7 265 Gene3D G3DSA:3.30.70.1430 55 158 1.1E-19 T 14-09-2016 AMK01_RS29700 582211bd7d8fb452e103b9d61b54f1f7 265 SUPERFAMILY SSF82714 199 263 3.92E-10 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS29700 582211bd7d8fb452e103b9d61b54f1f7 265 PANTHER PTHR32063 16 262 1.5E-101 T 14-09-2016 AMK01_RS29700 582211bd7d8fb452e103b9d61b54f1f7 265 PANTHER PTHR32063:SF18 16 262 1.5E-101 T 14-09-2016 AMK01_RS29700 582211bd7d8fb452e103b9d61b54f1f7 265 Gene3D G3DSA:3.30.2090.10 199 263 4.6E-9 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS29700 582211bd7d8fb452e103b9d61b54f1f7 265 SUPERFAMILY SSF82693 55 150 4.76E-18 T 14-09-2016 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 SMART SM00354 16 86 5.0E-20 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 19 37 - T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 63 4.5E-14 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 Gene3D G3DSA:3.40.50.2300 66 185 4.3E-25 T 14-09-2016 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 PANTHER PTHR30146:SF2 16 345 7.4E-100 T 14-09-2016 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 Gene3D G3DSA:3.40.50.2300 186 345 3.6E-48 T 14-09-2016 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 PANTHER PTHR30146 16 345 7.4E-100 T 14-09-2016 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 SUPERFAMILY SSF47413 16 73 9.09E-16 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 SUPERFAMILY SSF53822 76 344 9.85E-51 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 Pfam PF13377 Periplasmic binding protein-like domain 184 344 6.3E-32 T 14-09-2016 AMK01_RS05760 b07078c80a1159f839777f742f34e7e0 345 Gene3D G3DSA:1.10.260.40 16 65 6.3E-20 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 739 800 1.7E-27 T 14-09-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 811 101.624 T 14-09-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 386 406 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 482 491 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 206 219 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 780 796 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 15 25 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 254 272 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 372 386 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 324 340 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 764 776 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR01159 DNA gyrase subunit B signature 191 206 7.6E-69 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 432 446 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 45 60 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 537 549 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 80 93 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 517 534 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 123 137 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 743 759 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 280 293 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PRINTS PR00418 DNA topoisomerase II family signature 499 515 7.0E-71 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 SUPERFAMILY SSF55874 15 222 7.6E-71 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 811 5.5E-302 T 14-09-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Pfam PF00204 DNA gyrase B 233 402 3.0E-57 T 14-09-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Gene3D G3DSA:3.40.50.670 728 793 4.9E-94 T 14-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Gene3D G3DSA:3.40.50.670 416 562 4.9E-94 T 14-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Gene3D G3DSA:3.30.565.10 15 224 2.7E-89 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 SMART SM00433 45 623 1.3E-261 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PANTHER PTHR10169 1 565 1.3E-300 T 14-09-2016 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 PANTHER PTHR10169 728 811 1.3E-300 T 14-09-2016 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Pfam PF01751 Toprim domain 431 543 1.0E-17 T 14-09-2016 IPR006171 Toprim domain AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Gene3D G3DSA:3.30.230.10 232 404 4.3E-73 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 182 6.7E-22 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 SUPERFAMILY SSF56719 406 572 9.94E-86 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 SUPERFAMILY SSF56719 737 802 9.94E-86 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 SUPERFAMILY SSF54211 233 403 1.9E-58 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 SMART SM00387 41 186 6.3E-25 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00065 39d619bd67909c72752e9ba75808fa2f 811 ProSitePatterns PS00177 DNA topoisomerase II signature. 434 442 - T 14-09-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 PANTHER PTHR13847:SF196 1 458 3.3E-95 T 14-09-2016 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 Pfam PF01266 FAD dependent oxidoreductase 31 376 7.5E-40 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 SUPERFAMILY SSF50022 427 503 3.4E-20 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 SUPERFAMILY SSF51905 29 305 8.42E-34 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 Gene3D G3DSA:2.102.10.10 380 503 3.3E-24 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 PRINTS PR00162 Rieske 2Fe-2S subunit signature 457 468 7.5E-6 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 PRINTS PR00162 Rieske 2Fe-2S subunit signature 478 490 7.5E-6 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 PRINTS PR00162 Rieske 2Fe-2S subunit signature 490 502 7.5E-6 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 PANTHER PTHR13847 1 458 3.3E-95 T 14-09-2016 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 Gene3D G3DSA:3.50.50.60 20 120 8.0E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 Gene3D G3DSA:3.50.50.60 169 250 8.0E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 Gene3D G3DSA:3.50.50.60 340 379 8.0E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16425 4efb026ba9fb3f8af8a089eaf7412ba7 505 Pfam PF00355 Rieske [2Fe-2S] domain 425 503 7.1E-9 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS13955 de432b7e7a75895cc43c9e7a035d93c4 303 Gene3D G3DSA:3.10.310.10 4 131 8.5E-37 T 14-09-2016 AMK01_RS13955 de432b7e7a75895cc43c9e7a035d93c4 303 PIRSF PIRSF016184 1 303 1.3E-81 T 14-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK01_RS13955 de432b7e7a75895cc43c9e7a035d93c4 303 PANTHER PTHR13774 3 303 1.4E-68 T 14-09-2016 AMK01_RS13955 de432b7e7a75895cc43c9e7a035d93c4 303 Gene3D G3DSA:3.10.310.10 132 284 5.1E-37 T 14-09-2016 AMK01_RS13955 de432b7e7a75895cc43c9e7a035d93c4 303 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 7 302 4.0E-61 T 14-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK01_RS13955 de432b7e7a75895cc43c9e7a035d93c4 303 SUPERFAMILY SSF54506 4 302 2.27E-60 T 14-09-2016 AMK01_RS13955 de432b7e7a75895cc43c9e7a035d93c4 303 PANTHER PTHR13774:SF15 3 303 1.4E-68 T 14-09-2016 AMK01_RS13955 de432b7e7a75895cc43c9e7a035d93c4 303 Pfam PF02567 Phenazine biosynthesis-like protein 8 299 2.4E-57 T 14-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK01_RS11280 390866277c84b302e0a244816e26e70b 204 Pfam PF01227 GTP cyclohydrolase I 24 201 1.8E-78 T 14-09-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK01_RS11280 390866277c84b302e0a244816e26e70b 204 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 24 202 6.6E-68 T 14-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK01_RS11280 390866277c84b302e0a244816e26e70b 204 SUPERFAMILY SSF55620 13 202 3.41E-80 T 14-09-2016 AMK01_RS11280 390866277c84b302e0a244816e26e70b 204 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 81 97 - T 14-09-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK01_RS11280 390866277c84b302e0a244816e26e70b 204 Gene3D G3DSA:1.10.286.10 18 69 1.2E-24 T 14-09-2016 AMK01_RS11280 390866277c84b302e0a244816e26e70b 204 PANTHER PTHR11109 12 204 7.3E-102 T 14-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK01_RS11280 390866277c84b302e0a244816e26e70b 204 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 19 202 40.869 T 14-09-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 AMK01_RS11280 390866277c84b302e0a244816e26e70b 204 Gene3D G3DSA:3.30.1130.10 76 202 1.2E-58 T 14-09-2016 AMK01_RS24025 960e84b004910b62886aac36eb63541e 105 Gene3D G3DSA:3.40.190.10 61 103 1.2E-5 T 14-09-2016 AMK01_RS24025 960e84b004910b62886aac36eb63541e 105 PANTHER PTHR30537 1 102 3.7E-34 T 14-09-2016 AMK01_RS24025 960e84b004910b62886aac36eb63541e 105 SUPERFAMILY SSF53850 65 103 4.89E-5 T 14-09-2016 AMK01_RS24025 960e84b004910b62886aac36eb63541e 105 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 39 8.4E-11 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS24025 960e84b004910b62886aac36eb63541e 105 SUPERFAMILY SSF46785 2 65 4.28E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS24025 960e84b004910b62886aac36eb63541e 105 Gene3D G3DSA:1.10.10.10 2 60 1.7E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02865 1fa0ade59050f99775eac1d153d215fe 447 Pfam PF01554 MatE 251 388 4.6E-14 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS02865 1fa0ade59050f99775eac1d153d215fe 447 Pfam PF01554 MatE 24 183 1.1E-14 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS02865 1fa0ade59050f99775eac1d153d215fe 447 PANTHER PTHR11206:SF94 14 436 1.3E-98 T 14-09-2016 AMK01_RS02865 1fa0ade59050f99775eac1d153d215fe 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 417 7.1E-65 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS02865 1fa0ade59050f99775eac1d153d215fe 447 PANTHER PTHR11206 14 436 1.3E-98 T 14-09-2016 AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-15 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 Gene3D G3DSA:3.40.190.10 92 177 1.5E-20 T 14-09-2016 AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 PANTHER PTHR30537:SF5 1 297 8.5E-103 T 14-09-2016 AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 PANTHER PTHR30537 1 297 8.5E-103 T 14-09-2016 AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 SUPERFAMILY SSF53850 89 296 4.34E-42 T 14-09-2016 AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 SUPERFAMILY SSF46785 4 86 1.82E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 Gene3D G3DSA:1.10.10.10 2 81 1.2E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 Gene3D G3DSA:3.40.190.10 178 262 6.1E-10 T 14-09-2016 AMK01_RS18745 c2f994c11cf3e3ac88259fc03f02ed00 297 Pfam PF03466 LysR substrate binding domain 88 293 4.8E-40 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS20675 c529244e03753bb50d745451afef5435 514 Pfam PF01435 Peptidase family M48 98 282 5.6E-31 T 14-09-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMK01_RS20675 c529244e03753bb50d745451afef5435 514 Gene3D G3DSA:3.30.2010.10 95 175 4.0E-16 T 14-09-2016 AMK01_RS20675 c529244e03753bb50d745451afef5435 514 PANTHER PTHR22726:SF9 27 286 2.3E-52 T 14-09-2016 AMK01_RS20675 c529244e03753bb50d745451afef5435 514 PANTHER PTHR22726 27 286 2.3E-52 T 14-09-2016 AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 PANTHER PTHR19139 3 179 9.6E-21 T 14-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 SUPERFAMILY SSF81338 4 223 2.35E-44 T 14-09-2016 IPR023271 Aquaporin-like AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 Gene3D G3DSA:1.20.1080.10 4 219 6.8E-37 T 14-09-2016 IPR023271 Aquaporin-like AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 Pfam PF00230 Major intrinsic protein 3 144 2.2E-18 T 14-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 PRINTS PR00783 Major intrinsic protein family signature 86 105 2.6E-19 T 14-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 PRINTS PR00783 Major intrinsic protein family signature 8 27 2.6E-19 T 14-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 PRINTS PR00783 Major intrinsic protein family signature 49 73 2.6E-19 T 14-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 PRINTS PR00783 Major intrinsic protein family signature 129 147 2.6E-19 T 14-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS12910 07b60d269ffdcad89514685a692dfdc0 232 PRINTS PR00783 Major intrinsic protein family signature 196 216 2.6E-19 T 14-09-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 PANTHER PTHR30195:SF3 137 567 2.5E-160 T 14-09-2016 AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 PANTHER PTHR30195 137 567 2.5E-160 T 14-09-2016 AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 SUPERFAMILY SSF52540 678 822 5.78E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 SUPERFAMILY SSF52540 439 609 5.78E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 Pfam PF04851 Type III restriction enzyme, res subunit 425 607 2.3E-34 T 14-09-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 Pfam PF08463 EcoEI R protein C-terminal 970 1131 5.7E-32 T 14-09-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 SMART SM00487 422 635 8.4E-16 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 Gene3D G3DSA:3.40.50.300 698 817 2.3E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 SMART SM00490 730 817 7.2E-8 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 Gene3D G3DSA:3.40.50.300 420 607 1.6E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 Pfam PF13643 Domain of unknown function (DUF4145) 22 111 2.0E-6 T 14-09-2016 IPR025285 Domain of unknown function DUF4145 AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 PANTHER PTHR30195 585 1067 2.5E-160 T 14-09-2016 AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 Pfam PF00271 Helicase conserved C-terminal domain 711 815 2.0E-6 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS05175 dfb30ee7a2a458395f233bbb53b86a48 1136 PANTHER PTHR30195:SF3 585 1067 2.5E-160 T 14-09-2016 AMK01_RS05290 3b3bdf01ada65f90caae09cc0bd0ffc5 88 Gene3D G3DSA:1.10.10.10 21 47 3.6E-4 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14250 542adabc29a88f11016a06a323cf3a5d 162 PANTHER PTHR33221 2 160 8.3E-33 T 14-09-2016 AMK01_RS14250 542adabc29a88f11016a06a323cf3a5d 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 138 3.4E-29 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS14250 542adabc29a88f11016a06a323cf3a5d 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-09-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AMK01_RS14250 542adabc29a88f11016a06a323cf3a5d 162 SUPERFAMILY SSF46785 4 141 2.78E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14250 542adabc29a88f11016a06a323cf3a5d 162 Pfam PF02082 Transcriptional regulator 1 83 1.8E-22 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS14250 542adabc29a88f11016a06a323cf3a5d 162 Gene3D G3DSA:1.10.10.10 1 146 2.4E-33 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18315 1d47675d0cac8981f543726bb72c7780 618 PANTHER PTHR11804 185 615 1.1E-73 T 14-09-2016 AMK01_RS18315 1d47675d0cac8981f543726bb72c7780 618 SUPERFAMILY SSF55486 28 599 1.83E-115 T 14-09-2016 AMK01_RS18315 1d47675d0cac8981f543726bb72c7780 618 PANTHER PTHR11804:SF8 185 615 1.1E-73 T 14-09-2016 AMK01_RS18315 1d47675d0cac8981f543726bb72c7780 618 Pfam PF01432 Peptidase family M3 222 602 1.7E-40 T 14-09-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AMK01_RS18315 1d47675d0cac8981f543726bb72c7780 618 Gene3D G3DSA:3.40.390.10 392 444 1.1E-4 T 14-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK01_RS18315 1d47675d0cac8981f543726bb72c7780 618 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 32 615 2.1E-216 T 14-09-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 AMK01_RS18315 1d47675d0cac8981f543726bb72c7780 618 Gene3D G3DSA:1.25.10.10 216 266 9.2E-4 T 14-09-2016 IPR011989 Armadillo-like helical AMK01_RS18315 1d47675d0cac8981f543726bb72c7780 618 Pfam PF08439 Oligopeptidase F 138 206 4.5E-17 T 14-09-2016 IPR013647 Oligopeptidase F, N-terminal domain AMK01_RS16810 b389ac3025d56caef42406495d6bb858 131 SUPERFAMILY SSF46458 7 127 7.4E-31 T 14-09-2016 IPR009050 Globin-like AMK01_RS16810 b389ac3025d56caef42406495d6bb858 131 Pfam PF01152 Bacterial-like globin 7 127 3.5E-44 T 14-09-2016 IPR001486 Truncated hemoglobin GO:0019825 AMK01_RS16810 b389ac3025d56caef42406495d6bb858 131 Gene3D G3DSA:1.10.490.10 6 129 2.9E-36 T 14-09-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMK01_RS16810 b389ac3025d56caef42406495d6bb858 131 PANTHER PTHR10681 7 116 8.6E-13 T 14-09-2016 AMK01_RS00040 d198997a467a206ffc8943cf12c0d694 168 PANTHER PTHR35335:SF1 1 156 2.0E-24 T 14-09-2016 AMK01_RS00040 d198997a467a206ffc8943cf12c0d694 168 Pfam PF04186 FxsA cytoplasmic membrane protein 9 115 9.3E-30 T 14-09-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AMK01_RS00040 d198997a467a206ffc8943cf12c0d694 168 PANTHER PTHR35335 1 156 2.0E-24 T 14-09-2016 AMK01_RS08250 bb5bd0ce5d0ca93ecf8d35bd76a073fd 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.1E-17 T 14-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08250 bb5bd0ce5d0ca93ecf8d35bd76a073fd 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 11.916 T 14-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08250 bb5bd0ce5d0ca93ecf8d35bd76a073fd 55 PANTHER PTHR15238 1 55 5.0E-19 T 14-09-2016 AMK01_RS08250 bb5bd0ce5d0ca93ecf8d35bd76a073fd 55 SUPERFAMILY SSF57829 1 53 4.64E-17 T 14-09-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMK01_RS08250 bb5bd0ce5d0ca93ecf8d35bd76a073fd 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-09-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08250 bb5bd0ce5d0ca93ecf8d35bd76a073fd 55 PANTHER PTHR15238:SF1 1 55 5.0E-19 T 14-09-2016 AMK01_RS08250 bb5bd0ce5d0ca93ecf8d35bd76a073fd 55 Pfam PF00471 Ribosomal protein L33 7 53 1.6E-13 T 14-09-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS12170 11c26011126a524c82c12f27d5904699 275 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 57 124 5.8E-7 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS11295 97bf83529c4f32f5cab9b6a7886254b3 144 SUPERFAMILY SSF54631 12 142 3.66E-34 T 14-09-2016 AMK01_RS11295 97bf83529c4f32f5cab9b6a7886254b3 144 PANTHER PTHR11911 14 144 1.1E-36 T 14-09-2016 AMK01_RS11295 97bf83529c4f32f5cab9b6a7886254b3 144 SMART SM00116 15 63 1.5E-10 T 14-09-2016 IPR000644 CBS domain AMK01_RS11295 97bf83529c4f32f5cab9b6a7886254b3 144 SMART SM00116 81 128 2.2E-8 T 14-09-2016 IPR000644 CBS domain AMK01_RS11295 97bf83529c4f32f5cab9b6a7886254b3 144 Pfam PF00571 CBS domain 75 125 3.6E-12 T 14-09-2016 IPR000644 CBS domain AMK01_RS11295 97bf83529c4f32f5cab9b6a7886254b3 144 Pfam PF00571 CBS domain 14 63 1.4E-9 T 14-09-2016 IPR000644 CBS domain AMK01_RS11295 97bf83529c4f32f5cab9b6a7886254b3 144 Gene3D G3DSA:3.10.580.10 10 126 6.1E-33 T 14-09-2016 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 Pfam PF01842 ACT domain 355 421 1.1E-8 T 14-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 128 6.7E-14 T 14-09-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 SUPERFAMILY SSF51735 4 159 4.1E-29 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 Gene3D G3DSA:3.30.360.10 151 300 1.2E-57 T 14-09-2016 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 PANTHER PTHR21499:SF2 1 323 2.4E-123 T 14-09-2016 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 Gene3D G3DSA:3.30.70.260 355 420 3.2E-5 T 14-09-2016 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 Gene3D G3DSA:3.40.50.720 3 150 7.7E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 PANTHER PTHR21499 1 323 2.4E-123 T 14-09-2016 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 Pfam PF00742 Homoserine dehydrogenase 139 316 2.0E-63 T 14-09-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 PIRSF PIRSF000098 2 437 9.4E-159 T 14-09-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 SUPERFAMILY SSF55347 139 304 2.09E-54 T 14-09-2016 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 SUPERFAMILY SSF55021 352 420 3.77E-7 T 14-09-2016 AMK01_RS09505 f6ae5111da7a79b5481b3bd05356b587 441 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 185 207 - T 14-09-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS12745 9d051b410c63e19bd121cc690562c123 169 PIRSF PIRSF006135 2 169 4.9E-55 T 14-09-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 AMK01_RS12745 9d051b410c63e19bd121cc690562c123 169 SUPERFAMILY SSF52540 4 168 8.36E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12745 9d051b410c63e19bd121cc690562c123 169 PANTHER PTHR34848 4 169 3.9E-68 T 14-09-2016 AMK01_RS12745 9d051b410c63e19bd121cc690562c123 169 Gene3D G3DSA:3.40.50.300 4 168 5.1E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12745 9d051b410c63e19bd121cc690562c123 169 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 166 1.6E-60 T 14-09-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 AMK01_RS04260 755fd1031d7dade4f96765a271f62c2f 145 PANTHER PTHR11079 1 142 6.0E-35 T 14-09-2016 AMK01_RS04260 755fd1031d7dade4f96765a271f62c2f 145 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 44.176 T 14-09-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 AMK01_RS04260 755fd1031d7dade4f96765a271f62c2f 145 Gene3D G3DSA:3.40.140.10 1 140 3.5E-47 T 14-09-2016 AMK01_RS04260 755fd1031d7dade4f96765a271f62c2f 145 Pfam PF14437 MafB19-like deaminase 1 140 3.9E-26 T 14-09-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 AMK01_RS04260 755fd1031d7dade4f96765a271f62c2f 145 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 14-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK01_RS04260 755fd1031d7dade4f96765a271f62c2f 145 SUPERFAMILY SSF53927 1 142 1.68E-43 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK01_RS07885 c7045d7e72665b7aa0fd4f37dfafdb42 520 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 69 520 8.3E-132 T 14-09-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMK01_RS07885 c7045d7e72665b7aa0fd4f37dfafdb42 520 PANTHER PTHR30576 35 520 2.0E-174 T 14-09-2016 AMK01_RS07885 c7045d7e72665b7aa0fd4f37dfafdb42 520 Pfam PF13727 CoA-binding domain 110 290 1.2E-49 T 14-09-2016 AMK01_RS07885 c7045d7e72665b7aa0fd4f37dfafdb42 520 Pfam PF02397 Bacterial sugar transferase 326 514 8.5E-57 T 14-09-2016 IPR003362 Bacterial sugar transferase AMK01_RS07885 c7045d7e72665b7aa0fd4f37dfafdb42 520 PANTHER PTHR30576:SF9 35 520 2.0E-174 T 14-09-2016 AMK01_RS07885 c7045d7e72665b7aa0fd4f37dfafdb42 520 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 87 520 2.7E-138 T 14-09-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AMK01_RS07885 c7045d7e72665b7aa0fd4f37dfafdb42 520 SUPERFAMILY SSF51735 192 279 2.79E-6 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07885 c7045d7e72665b7aa0fd4f37dfafdb42 520 Gene3D G3DSA:3.40.50.720 192 269 3.2E-5 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03250 a6ce9b6bf33e35cf8a55951a8f9d0f33 328 PANTHER PTHR32196:SF9 41 322 6.5E-61 T 14-09-2016 AMK01_RS03250 a6ce9b6bf33e35cf8a55951a8f9d0f33 328 PANTHER PTHR32196 41 322 6.5E-61 T 14-09-2016 AMK01_RS03250 a6ce9b6bf33e35cf8a55951a8f9d0f33 328 Pfam PF13407 Periplasmic binding protein domain 47 310 2.1E-56 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS03250 a6ce9b6bf33e35cf8a55951a8f9d0f33 328 SUPERFAMILY SSF53822 45 327 1.72E-70 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS03250 a6ce9b6bf33e35cf8a55951a8f9d0f33 328 Gene3D G3DSA:3.40.50.2300 172 326 8.5E-48 T 14-09-2016 AMK01_RS03250 a6ce9b6bf33e35cf8a55951a8f9d0f33 328 Gene3D G3DSA:3.40.50.2300 40 171 4.3E-36 T 14-09-2016 AMK01_RS17090 990bc945a5a3075f59f97e54bf817952 463 PANTHER PTHR30482:SF9 84 462 2.6E-142 T 14-09-2016 AMK01_RS17090 990bc945a5a3075f59f97e54bf817952 463 Pfam PF02653 Branched-chain amino acid transport system / permease component 136 430 1.4E-48 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS17090 990bc945a5a3075f59f97e54bf817952 463 PANTHER PTHR30482 84 462 2.6E-142 T 14-09-2016 AMK01_RS17090 990bc945a5a3075f59f97e54bf817952 463 Pfam PF11862 Domain of unknown function (DUF3382) 20 118 5.4E-17 T 14-09-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 168 182 - T 14-09-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 SMART SM00845 351 496 8.1E-78 T 14-09-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 21 496 9.7E-164 T 14-09-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 SUPERFAMILY SSF55931 23 319 5.36E-112 T 14-09-2016 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 Pfam PF02637 GatB domain 351 496 7.2E-50 T 14-09-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 21 497 36.961 T 14-09-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 PANTHER PTHR11659:SF0 21 500 1.4E-247 T 14-09-2016 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 PANTHER PTHR11659 21 500 1.4E-247 T 14-09-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 SUPERFAMILY SSF89095 320 425 8.72E-35 T 14-09-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AMK01_RS09425 a712e3ef6b3de0fc98406a1d01f06c9f 500 Pfam PF02934 GatB/GatE catalytic domain 24 311 8.6E-113 T 14-09-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AMK01_RS20795 d0e6c4ac04ad3162a829eeb0ced2cdea 78 Pfam PF01037 Lrp/AsnC ligand binding domain 6 75 5.9E-14 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS20795 d0e6c4ac04ad3162a829eeb0ced2cdea 78 Gene3D G3DSA:3.30.70.920 5 77 3.2E-23 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS20795 d0e6c4ac04ad3162a829eeb0ced2cdea 78 PANTHER PTHR30154 5 78 1.0E-13 T 14-09-2016 AMK01_RS20795 d0e6c4ac04ad3162a829eeb0ced2cdea 78 SUPERFAMILY SSF54909 4 77 6.03E-18 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS14000 011dfb9f8f28b0ed42f3dc9e5aa6152f 352 Pfam PF00248 Aldo/keto reductase family 16 318 1.2E-70 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS14000 011dfb9f8f28b0ed42f3dc9e5aa6152f 352 Gene3D G3DSA:3.20.20.100 9 320 2.3E-93 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS14000 011dfb9f8f28b0ed42f3dc9e5aa6152f 352 SUPERFAMILY SSF51430 1 321 6.42E-97 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS14000 011dfb9f8f28b0ed42f3dc9e5aa6152f 352 PRINTS PR00069 Aldo-keto reductase signature 143 160 4.5E-6 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS14000 011dfb9f8f28b0ed42f3dc9e5aa6152f 352 PRINTS PR00069 Aldo-keto reductase signature 47 71 4.5E-6 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS14000 011dfb9f8f28b0ed42f3dc9e5aa6152f 352 PRINTS PR00069 Aldo-keto reductase signature 112 130 4.5E-6 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS14000 011dfb9f8f28b0ed42f3dc9e5aa6152f 352 PANTHER PTHR11732 1 318 3.6E-115 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 SMART SM00671 259 294 0.0028 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 SMART SM00671 295 330 0.82 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 SMART SM00671 186 221 59.0 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 SMART SM00671 150 185 2.2E-6 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 SMART SM00671 222 258 5.8 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 SMART SM00671 114 149 1.2E-6 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 PANTHER PTHR11102 109 351 5.7E-44 T 14-09-2016 AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 Gene3D G3DSA:1.25.40.10 89 329 1.1E-49 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 SUPERFAMILY SSF81901 88 331 4.01E-45 T 14-09-2016 AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 Pfam PF08238 Sel1 repeat 296 325 0.0045 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 Pfam PF08238 Sel1 repeat 150 185 2.6E-6 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 Pfam PF08238 Sel1 repeat 222 257 0.012 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 Pfam PF08238 Sel1 repeat 261 294 4.2E-5 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 Pfam PF08238 Sel1 repeat 114 149 9.0E-5 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS18195 0b7edfa81fe685def3d1b7415f9ae305 360 Pfam PF08238 Sel1 repeat 207 220 70.0 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS04920 557e07ec73d71af4caeba28b0ce96462 201 SUPERFAMILY SSF143456 15 201 2.35E-62 T 14-09-2016 AMK01_RS04920 557e07ec73d71af4caeba28b0ce96462 201 Gene3D G3DSA:3.30.70.1300 53 144 6.6E-26 T 14-09-2016 AMK01_RS04920 557e07ec73d71af4caeba28b0ce96462 201 Pfam PF02622 Uncharacterized ACR, COG1678 24 188 2.3E-46 T 14-09-2016 IPR003774 Protein of unknown function UPF0301 AMK01_RS04920 557e07ec73d71af4caeba28b0ce96462 201 PANTHER PTHR30327 15 201 1.6E-55 T 14-09-2016 AMK01_RS04920 557e07ec73d71af4caeba28b0ce96462 201 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 13 201 37.14 T 14-09-2016 IPR003774 Protein of unknown function UPF0301 AMK01_RS04920 557e07ec73d71af4caeba28b0ce96462 201 PANTHER PTHR30327:SF1 15 201 1.6E-55 T 14-09-2016 AMK01_RS04920 557e07ec73d71af4caeba28b0ce96462 201 Gene3D G3DSA:3.40.1740.10 14 52 1.6E-32 T 14-09-2016 AMK01_RS04920 557e07ec73d71af4caeba28b0ce96462 201 Gene3D G3DSA:3.40.1740.10 145 191 1.6E-32 T 14-09-2016 AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 Gene3D G3DSA:3.40.50.880 252 446 8.1E-30 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 PANTHER PTHR21343:SF1 1 483 4.0E-186 T 14-09-2016 AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 Gene3D G3DSA:3.40.50.300 3 231 4.5E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 PANTHER PTHR21343 1 483 4.0E-186 T 14-09-2016 AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 SUPERFAMILY SSF52540 1 239 4.83E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 SUPERFAMILY SSF52317 253 446 3.67E-38 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 231 2.2E-28 T 14-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 476 7.8E-133 T 14-09-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 437 6.4E-55 T 14-09-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 AMK01_RS12760 8b9a5d42386d71ff551a2c686091da36 489 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 486 194.83 T 14-09-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 AMK01_RS06940 e69cce75e9bb4a41f82fada20d50e8bc 484 Pfam PF02397 Bacterial sugar transferase 285 478 4.2E-46 T 14-09-2016 IPR003362 Bacterial sugar transferase AMK01_RS06940 e69cce75e9bb4a41f82fada20d50e8bc 484 PANTHER PTHR30576 23 483 6.9E-72 T 14-09-2016 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 Gene3D G3DSA:2.30.42.10 290 383 4.8E-29 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 Gene3D G3DSA:2.30.42.10 403 495 1.6E-22 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 Gene3D G3DSA:2.40.10.10 49 175 8.1E-35 T 14-09-2016 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PANTHER PTHR22939 96 381 6.4E-111 T 14-09-2016 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PANTHER PTHR22939:SF79 31 71 6.4E-111 T 14-09-2016 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 Gene3D G3DSA:2.40.10.10 177 289 3.4E-44 T 14-09-2016 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 SUPERFAMILY SSF50156 403 496 1.18E-18 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PANTHER PTHR22939:SF79 96 381 6.4E-111 T 14-09-2016 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 SUPERFAMILY SSF50156 245 370 3.94E-22 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 1.2E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 1.2E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PRINTS PR00834 HtrA/DegQ protease family signature 144 164 1.2E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.2E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PRINTS PR00834 HtrA/DegQ protease family signature 185 209 1.2E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 1.2E-54 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 Pfam PF13365 Trypsin-like peptidase domain 114 248 1.8E-34 T 14-09-2016 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 Pfam PF13180 PDZ domain 287 378 3.2E-18 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 Pfam PF13180 PDZ domain 403 495 3.0E-13 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 SUPERFAMILY SSF50494 101 282 1.3E-62 T 14-09-2016 IPR009003 Peptidase S1, PA clan AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 SUPERFAMILY SSF50494 50 72 1.3E-62 T 14-09-2016 IPR009003 Peptidase S1, PA clan AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 50 494 1.1E-153 T 14-09-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 PANTHER PTHR22939 31 71 6.4E-111 T 14-09-2016 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 SMART SM00228 287 369 6.8E-11 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS05755 b2305727b6b5b3203c79da5d648255fd 500 SMART SM00228 403 488 3.8E-11 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 SUPERFAMILY SSF46894 166 240 4.42E-19 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 SUPERFAMILY SSF75516 26 166 2.75E-10 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 SMART SM00421 177 234 6.0E-19 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 1.2E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 1.2E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 1.2E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 Pfam PF03472 Autoinducer binding domain 29 164 3.3E-11 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 Gene3D G3DSA:3.30.450.80 18 182 1.9E-6 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 2.2E-17 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 Gene3D G3DSA:1.10.10.10 183 240 5.4E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15685 208d8201d2c805c153e7fe3fe2aaa4cc 241 PANTHER PTHR26402 167 236 7.7E-13 T 14-09-2016 AMK01_RS15295 91264df0984eb8406b9e0608c7e3fde0 542 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 103 258 2.8E-12 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 Gene3D G3DSA:3.30.2090.10 732 816 4.3E-26 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 2.9E-95 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PANTHER PTHR32063:SF11 1 1043 0.0 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82693 575 681 6.02E-27 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82693 682 731 9.68E-28 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82693 818 867 9.68E-28 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 Gene3D G3DSA:3.30.70.1430 579 681 5.1E-30 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82693 41 134 1.26E-26 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82714 185 274 2.49E-21 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 PANTHER PTHR32063 1 1043 0.0 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82866 841 1038 3.79E-46 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 Gene3D G3DSA:1.10.3850.10 285 501 1.9E-64 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 Gene3D G3DSA:1.10.3850.10 824 1038 9.2E-57 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 Pfam PF00873 AcrB/AcrD/AcrF family 3 1036 0.0 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 Gene3D G3DSA:3.30.2090.10 184 278 1.0E-28 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82693 277 333 4.06E-31 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82693 137 184 4.06E-31 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82714 732 818 9.55E-23 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 Gene3D G3DSA:3.30.70.1430 41 142 5.6E-34 T 14-09-2016 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1054 0.0 T 14-09-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AMK01_RS17215 5f2d421276825681c59f4d981b318525 1066 SUPERFAMILY SSF82866 299 499 6.54E-54 T 14-09-2016 AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 302 8.8E-8 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 388 416 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 SUPERFAMILY SSF53448 6 254 1.55E-54 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 Gene3D G3DSA:3.90.550.10 3 252 5.3E-59 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 Gene3D G3DSA:2.160.10.10 259 424 4.7E-42 T 14-09-2016 AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 7 434 3.0E-141 T 14-09-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 PANTHER PTHR22572 6 434 4.0E-158 T 14-09-2016 AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 Pfam PF12804 MobA-like NTP transferase domain 7 147 2.7E-20 T 14-09-2016 IPR025877 MobA-like NTP transferase AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 PANTHER PTHR22572:SF115 6 434 4.0E-158 T 14-09-2016 AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 SUPERFAMILY SSF51161 251 431 8.64E-50 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 437 36.729 T 14-09-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 AMK01_RS10725 af020a383943186fb0aa0ee519ec90f9 453 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 380 414 4.3E-10 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS20250 d0f9da3e0f28ed38da257e60c5801b10 185 SUPERFAMILY SSF55729 3 166 2.23E-33 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS20250 d0f9da3e0f28ed38da257e60c5801b10 185 PANTHER PTHR23091:SF183 1 169 5.4E-38 T 14-09-2016 AMK01_RS20250 d0f9da3e0f28ed38da257e60c5801b10 185 Pfam PF13420 Acetyltransferase (GNAT) domain 5 160 8.2E-23 T 14-09-2016 AMK01_RS20250 d0f9da3e0f28ed38da257e60c5801b10 185 Gene3D G3DSA:3.40.630.30 1 168 6.4E-43 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS20250 d0f9da3e0f28ed38da257e60c5801b10 185 PANTHER PTHR23091 1 169 5.4E-38 T 14-09-2016 AMK01_RS01035 346ef99cb88d019760a95759edcf497b 362 Gene3D G3DSA:1.10.3720.10 127 353 7.4E-16 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01035 346ef99cb88d019760a95759edcf497b 362 SUPERFAMILY SSF161098 127 340 5.23E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01035 346ef99cb88d019760a95759edcf497b 362 PANTHER PTHR30465:SF66 1 45 1.4E-188 T 14-09-2016 AMK01_RS01035 346ef99cb88d019760a95759edcf497b 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 148 355 4.9E-34 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01035 346ef99cb88d019760a95759edcf497b 362 PANTHER PTHR30465 66 357 1.4E-188 T 14-09-2016 AMK01_RS01035 346ef99cb88d019760a95759edcf497b 362 PANTHER PTHR30465 1 45 1.4E-188 T 14-09-2016 AMK01_RS01035 346ef99cb88d019760a95759edcf497b 362 PANTHER PTHR30465:SF66 66 357 1.4E-188 T 14-09-2016 AMK01_RS19530 276f70d2484ecd1bcd13b6bb542be447 889 TIGRFAM TIGR02302 aProt_lowcomp: TIGR02302 family protein 25 888 0.0 T 14-09-2016 IPR012683 Conserved hypothetical protein CHP02302, transmembrane AMK01_RS19530 276f70d2484ecd1bcd13b6bb542be447 889 Pfam PF13779 Domain of unknown function (DUF4175) 36 887 4.0E-298 T 14-09-2016 IPR012683 Conserved hypothetical protein CHP02302, transmembrane AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 Gene3D G3DSA:3.40.47.10 279 423 5.2E-54 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 SUPERFAMILY SSF53901 15 268 8.91E-48 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 Gene3D G3DSA:3.40.47.10 15 271 6.3E-51 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 169 185 - T 14-09-2016 IPR018201 Beta-ketoacyl synthase, active site AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 15 261 2.8E-31 T 14-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 SUPERFAMILY SSF53901 229 423 1.57E-61 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 270 383 3.0E-29 T 14-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 SMART SM00825 Beta-ketoacyl synthase 15 428 1.8E-13 T 14-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 PANTHER PTHR11712 15 96 1.7E-109 T 14-09-2016 AMK01_RS12660 452fa2e32019b215d7fbdd497678bdd9 428 PANTHER PTHR11712 117 424 1.7E-109 T 14-09-2016 AMK01_RS09420 d8c3118b66ee87b3b985a99234119b62 103 Pfam PF06961 Protein of unknown function (DUF1294) 17 71 9.8E-24 T 14-09-2016 IPR010718 Protein of unknown function DUF1294 AMK01_RS09420 d8c3118b66ee87b3b985a99234119b62 103 PANTHER PTHR12962:SF1 9 81 6.1E-18 T 14-09-2016 AMK01_RS09420 d8c3118b66ee87b3b985a99234119b62 103 PANTHER PTHR12962 9 81 6.1E-18 T 14-09-2016 AMK01_RS18365 5fa09587e704be3dadd028263ca05ddc 512 SUPERFAMILY SSF103515 224 376 2.35E-8 T 14-09-2016 IPR005546 Autotransporter beta-domain AMK01_RS18365 5fa09587e704be3dadd028263ca05ddc 512 Pfam PF10082 Putative beta-barrel porin 2 139 512 1.5E-113 T 14-09-2016 IPR018759 Putative beta-barrel porin 2 AMK01_RS18365 5fa09587e704be3dadd028263ca05ddc 512 Gene3D G3DSA:2.40.160.20 231 382 1.7E-6 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS26790 157e88dab79146f191e1e35e35bea1e7 86 PANTHER PTHR32089 1 86 1.9E-37 T 14-09-2016 AMK01_RS26790 157e88dab79146f191e1e35e35bea1e7 86 Gene3D G3DSA:1.10.287.950 2 84 1.3E-35 T 14-09-2016 AMK01_RS26790 157e88dab79146f191e1e35e35bea1e7 86 SUPERFAMILY SSF58104 3 79 3.27E-37 T 14-09-2016 AMK01_RS26790 157e88dab79146f191e1e35e35bea1e7 86 PANTHER PTHR32089:SF63 1 86 1.9E-37 T 14-09-2016 AMK01_RS26790 157e88dab79146f191e1e35e35bea1e7 86 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 52 81 3.2E-26 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS26790 157e88dab79146f191e1e35e35bea1e7 86 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 23 50 3.2E-26 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS26790 157e88dab79146f191e1e35e35bea1e7 86 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 2 83 4.4E-38 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PANTHER PTHR23504:SF18 1 392 3.2E-110 T 14-09-2016 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PANTHER PTHR23504 1 392 3.2E-110 T 14-09-2016 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 SUPERFAMILY SSF103473 3 388 1.27E-57 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 Gene3D G3DSA:1.20.1250.20 3 186 1.8E-40 T 14-09-2016 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 Gene3D G3DSA:1.20.1250.20 208 380 1.1E-13 T 14-09-2016 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 Pfam PF07690 Major Facilitator Superfamily 8 350 2.2E-46 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 299 319 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 334 357 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 274 295 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 364 383 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 43 62 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 14 30 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 217 234 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 246 266 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 131 153 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 159 179 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 74 98 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 PRINTS PR01035 Tetracycline resistance protein signature 101 122 2.1E-94 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS05220 2aac8c4d9829f03253b95ee905d900be 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 14-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 PANTHER PTHR18919 250 402 2.5E-219 T 14-09-2016 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 PANTHER PTHR18919 1 228 2.5E-219 T 14-09-2016 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 PANTHER PTHR18919:SF12 250 402 2.5E-219 T 14-09-2016 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 PANTHER PTHR18919:SF12 1 228 2.5E-219 T 14-09-2016 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 Pfam PF02803 Thiolase, C-terminal domain 279 401 1.3E-44 T 14-09-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 14-09-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 SUPERFAMILY SSF53901 280 401 1.44E-40 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 Gene3D G3DSA:3.40.47.10 286 401 3.0E-57 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 Gene3D G3DSA:3.40.47.10 145 184 3.0E-57 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-09-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 14-09-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 400 1.9E-121 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 PIRSF PIRSF000429 1 402 3.2E-117 T 14-09-2016 IPR002155 Thiolase GO:0008152|GO:0016747 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 SUPERFAMILY SSF53901 1 273 3.79E-62 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 Pfam PF00108 Thiolase, N-terminal domain 4 229 1.7E-46 T 14-09-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 Gene3D G3DSA:3.40.47.10 3 126 3.3E-56 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS02960 b74458db5ede3f75fa0fd3bd3b2a6cb5 402 Gene3D G3DSA:3.40.47.10 185 285 3.3E-56 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 SUPERFAMILY SSF101386 151 249 1.13E-25 T 14-09-2016 AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 PANTHER PTHR30522 5 276 7.6E-117 T 14-09-2016 AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 SUPERFAMILY SSF101386 5 108 8.18E-26 T 14-09-2016 AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 TIGRFAM TIGR00444 mazG: MazG family protein 13 270 6.4E-92 T 14-09-2016 IPR011551 NTP pyrophosphohydrolase MazG AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 Gene3D G3DSA:1.10.287.1080 20 76 7.2E-8 T 14-09-2016 AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 Gene3D G3DSA:1.10.287.1080 149 232 5.1E-13 T 14-09-2016 AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 177 242 8.2E-9 T 14-09-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 4.9E-29 T 14-09-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMK01_RS10025 94baf14b2c3ab6963248534ea66297be 279 PANTHER PTHR30522:SF0 5 276 7.6E-117 T 14-09-2016 IPR011551 NTP pyrophosphohydrolase MazG AMK01_RS12385 f93be72c7eb2f9743c354b14b5bf43a5 228 Gene3D G3DSA:3.40.30.10 3 98 1.5E-16 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS12385 f93be72c7eb2f9743c354b14b5bf43a5 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 82 1.4E-9 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS12385 f93be72c7eb2f9743c354b14b5bf43a5 228 SUPERFAMILY SSF47616 85 210 3.13E-25 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS12385 f93be72c7eb2f9743c354b14b5bf43a5 228 PANTHER PTHR11260 1 207 3.5E-36 T 14-09-2016 AMK01_RS12385 f93be72c7eb2f9743c354b14b5bf43a5 228 PANTHER PTHR11260:SF285 1 207 3.5E-36 T 14-09-2016 AMK01_RS12385 f93be72c7eb2f9743c354b14b5bf43a5 228 Gene3D G3DSA:1.20.1050.10 99 215 2.6E-30 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS12385 f93be72c7eb2f9743c354b14b5bf43a5 228 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 197 2.2E-11 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AMK01_RS12385 f93be72c7eb2f9743c354b14b5bf43a5 228 SUPERFAMILY SSF52833 1 107 3.49E-19 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 PIRSF PIRSF006493 1 267 3.0E-89 T 14-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 PANTHER PTHR41251:SF1 3 262 2.6E-43 T 14-09-2016 AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 SMART SM00559 55 184 3.0E-17 T 14-09-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 Gene3D G3DSA:2.40.290.10 11 151 1.4E-9 T 14-09-2016 IPR016194 SPOC-like, C-terminal domain AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 PANTHER PTHR41251 3 262 2.6E-43 T 14-09-2016 AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 259 29.288 T 14-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 TIGRFAM TIGR02772 Ku_bact: Ku protein 5 261 4.1E-84 T 14-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 Pfam PF02735 Ku70/Ku80 beta-barrel domain 14 178 5.9E-31 T 14-09-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 AMK01_RS03270 b893d8de4f333d33ef87e7fca891845e 267 SUPERFAMILY SSF100939 3 260 1.73E-44 T 14-09-2016 IPR016194 SPOC-like, C-terminal domain AMK01_RS05655 552bbcd9796a9337ac0ff09baacb012b 154 Gene3D G3DSA:1.10.530.40 13 153 3.8E-48 T 14-09-2016 IPR023347 Lysozyme domain GO:0003796 AMK01_RS05655 552bbcd9796a9337ac0ff09baacb012b 154 SUPERFAMILY SSF53955 10 153 4.76E-45 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS05655 552bbcd9796a9337ac0ff09baacb012b 154 Pfam PF00959 Phage lysozyme 40 145 4.2E-16 T 14-09-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AMK01_RS05655 552bbcd9796a9337ac0ff09baacb012b 154 PANTHER PTHR38107 1 154 7.7E-26 T 14-09-2016 AMK01_RS05655 552bbcd9796a9337ac0ff09baacb012b 154 PANTHER PTHR38107:SF2 1 154 7.7E-26 T 14-09-2016 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PANTHER PTHR11946 246 589 0.0 T 14-09-2016 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PANTHER PTHR11946 631 876 0.0 T 14-09-2016 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 1.7E-44 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 501 519 1.7E-44 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 1.7E-44 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 1.7E-44 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 572 582 1.7E-44 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 539 561 1.7E-44 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 1.7E-44 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 SUPERFAMILY SSF52374 5 227 4.28E-153 T 14-09-2016 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 SUPERFAMILY SSF52374 430 681 4.28E-153 T 14-09-2016 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 631 671 1.6E-8 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 172 3.2E-25 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 431 604 3.3E-9 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Pfam PF08264 Anticodon-binding domain of tRNA 716 839 8.1E-17 T 14-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 876 2.7E-302 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Gene3D G3DSA:1.10.730.10 661 811 1.0E-37 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PANTHER PTHR11946:SF7 3 207 0.0 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 SUPERFAMILY SSF47323 675 876 1.81E-28 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PANTHER PTHR11946 3 207 0.0 T 14-09-2016 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 876 22.692 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PANTHER PTHR11946:SF7 246 589 0.0 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 PANTHER PTHR11946:SF7 631 876 0.0 T 14-09-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Gene3D G3DSA:3.40.50.620 439 588 5.8E-155 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Gene3D G3DSA:3.40.50.620 4 223 5.8E-155 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Gene3D G3DSA:3.40.50.620 631 660 5.8E-155 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 412 1.9E-65 T 14-09-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 Gene3D G3DSA:3.90.740.10 224 438 4.2E-46 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK01_RS21150 dc60b2a7371fc8806511d83170241a40 876 SUPERFAMILY SSF50677 227 418 1.26E-44 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 194 2.1E-10 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 295 2.1E-10 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 424 2.1E-10 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Gene3D G3DSA:3.30.1360.120 609 666 4.1E-36 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Gene3D G3DSA:3.30.1360.120 759 856 4.1E-36 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Gene3D G3DSA:3.30.70.1400 667 752 6.2E-23 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 SUPERFAMILY SSF101790 899 994 9.16E-19 T 14-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Gene3D G3DSA:2.40.30.110 903 996 1.2E-20 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 4 997 0.0 T 14-09-2016 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Pfam PF01571 Aminomethyltransferase folate-binding domain 613 879 2.2E-71 T 14-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 885 984 4.5E-14 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PANTHER PTHR13847 115 223 1.5E-71 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PANTHER PTHR13847:SF189 609 921 1.5E-71 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PANTHER PTHR13847:SF189 115 223 1.5E-71 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PIRSF PIRSF037980 1 997 0.0 T 14-09-2016 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 102 5.1E-26 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PANTHER PTHR13847 609 921 1.5E-71 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 431 2.1E-14 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 SUPERFAMILY SSF51905 143 480 1.1E-32 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 409 425 1.3E-11 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 1.3E-11 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 1.3E-11 T 14-09-2016 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Gene3D G3DSA:3.50.50.60 363 429 2.1E-29 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 Gene3D G3DSA:3.50.50.60 166 316 2.1E-29 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18580 f5c89fc5b3b87b2662df12cdd47193ea 997 SUPERFAMILY SSF103025 607 893 5.65E-94 T 14-09-2016 AMK01_RS20460 623fc9ebe99d04d6d073a243e99dd1b0 327 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 6 326 4.9E-127 T 14-09-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 AMK01_RS20460 623fc9ebe99d04d6d073a243e99dd1b0 327 Gene3D G3DSA:3.40.50.720 2 171 2.2E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20460 623fc9ebe99d04d6d073a243e99dd1b0 327 SUPERFAMILY SSF51735 1 322 1.55E-91 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20460 623fc9ebe99d04d6d073a243e99dd1b0 327 PANTHER PTHR10366 5 326 1.3E-111 T 14-09-2016 AMK01_RS20460 623fc9ebe99d04d6d073a243e99dd1b0 327 PANTHER PTHR10366:SF39 5 326 1.3E-111 T 14-09-2016 AMK01_RS20460 623fc9ebe99d04d6d073a243e99dd1b0 327 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 315 6.8E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20460 623fc9ebe99d04d6d073a243e99dd1b0 327 Gene3D G3DSA:3.90.25.10 172 224 5.7E-42 T 14-09-2016 AMK01_RS20460 623fc9ebe99d04d6d073a243e99dd1b0 327 Gene3D G3DSA:3.90.25.10 256 324 5.7E-42 T 14-09-2016 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 Gene3D G3DSA:1.10.287.130 349 408 6.7E-16 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 593 1.3E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 SMART SM00388 358 423 6.4E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 SMART SM00387 475 594 1.2E-30 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 PANTHER PTHR24423 296 595 2.9E-52 T 14-09-2016 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 PANTHER PTHR24423 15 42 2.9E-52 T 14-09-2016 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 Pfam PF13756 Stimulus-sensing domain 133 242 1.9E-36 T 14-09-2016 IPR025919 Stimulus-sensing domain AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 Gene3D G3DSA:3.30.565.10 409 593 8.2E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 Pfam PF00672 HAMP domain 284 353 1.1E-11 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 SUPERFAMILY SSF47384 341 422 6.47E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 Pfam PF00512 His Kinase A (phospho-acceptor) domain 361 422 3.0E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 SMART SM00304 302 357 4.6E-4 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 4.7E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 4.7E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 566 4.7E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 4.7E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 SUPERFAMILY SSF55874 413 592 9.95E-33 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00180 e03c0ca3897bc6cf04029d9625349e11 596 Pfam PF13755 Sensor N-terminal transmembrane domain 34 108 6.6E-34 T 14-09-2016 IPR025908 Sensor N-terminal transmembrane domain AMK01_RS08100 d345b505d9d461b89995d7680f5d8347 200 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 34 151 1.2E-45 T 14-09-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AMK01_RS08100 d345b505d9d461b89995d7680f5d8347 200 PANTHER PTHR10884:SF10 29 186 1.5E-98 T 14-09-2016 AMK01_RS08100 d345b505d9d461b89995d7680f5d8347 200 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 113 134 - T 14-09-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 AMK01_RS08100 d345b505d9d461b89995d7680f5d8347 200 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 1.0E-45 T 14-09-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AMK01_RS08100 d345b505d9d461b89995d7680f5d8347 200 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 83 139 4.0E-22 T 14-09-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AMK01_RS08100 d345b505d9d461b89995d7680f5d8347 200 SUPERFAMILY SSF143243 7 185 2.62E-63 T 14-09-2016 AMK01_RS08100 d345b505d9d461b89995d7680f5d8347 200 PANTHER PTHR10884 29 186 1.5E-98 T 14-09-2016 AMK01_RS08100 d345b505d9d461b89995d7680f5d8347 200 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 160 32.195 T 14-09-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 160 1.3E-36 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 Pfam PF01327 Polypeptide deformylase 4 152 1.3E-37 T 14-09-2016 IPR023635 Peptide deformylase AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 PRINTS PR01576 Peptide deformylase signature 120 149 1.5E-22 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 PRINTS PR01576 Peptide deformylase signature 101 119 1.5E-22 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 PRINTS PR01576 Peptide deformylase signature 89 100 1.5E-22 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 PRINTS PR01576 Peptide deformylase signature 33 62 1.5E-22 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 Hamap MF_00163 Peptide deformylase [def]. 2 162 24.03 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 PANTHER PTHR10458 1 163 1.2E-48 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 SUPERFAMILY SSF56420 2 162 1.57E-48 T 14-09-2016 IPR023635 Peptide deformylase AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 PIRSF PIRSF004749 1 164 8.9E-46 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS11370 de65f09c736ec85c6567a57cd7f18eca 164 Gene3D G3DSA:3.90.45.10 4 162 5.8E-48 T 14-09-2016 IPR023635 Peptide deformylase AMK01_RS08180 abe55e03694526b6814429f6e028b48e 134 PANTHER PTHR21366:SF9 1 133 5.2E-66 T 14-09-2016 AMK01_RS08180 abe55e03694526b6814429f6e028b48e 134 PANTHER PTHR21366 1 133 5.2E-66 T 14-09-2016 AMK01_RS08180 abe55e03694526b6814429f6e028b48e 134 Gene3D G3DSA:3.10.180.10 1 133 1.5E-44 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS08180 abe55e03694526b6814429f6e028b48e 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 118 2.7E-20 T 14-09-2016 AMK01_RS08180 abe55e03694526b6814429f6e028b48e 134 SUPERFAMILY SSF54593 1 133 3.99E-33 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS08180 abe55e03694526b6814429f6e028b48e 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 133 2.4E-49 T 14-09-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 Gene3D G3DSA:3.40.50.300 5 234 1.7E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 Gene3D G3DSA:3.40.50.300 257 493 2.1E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 PANTHER PTHR24220:SF440 10 384 8.1E-207 T 14-09-2016 AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 PANTHER PTHR24220 10 384 8.1E-207 T 14-09-2016 AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 SUPERFAMILY SSF52540 8 232 1.59E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 SUPERFAMILY SSF52540 268 488 6.78E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 SMART SM00382 284 486 8.4E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 SMART SM00382 33 221 5.7E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 Pfam PF00005 ABC transporter 276 429 1.1E-19 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10705 5971a668ef445d9532843e337f383a0c 506 Pfam PF00005 ABC transporter 24 173 2.2E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16085 1c0564c4ec2103c14d16f521e47f5550 136 PANTHER PTHR36173 2 131 6.1E-38 T 14-09-2016 AMK01_RS16085 1c0564c4ec2103c14d16f521e47f5550 136 SUPERFAMILY SSF88723 2 125 5.33E-22 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS16085 1c0564c4ec2103c14d16f521e47f5550 136 Gene3D G3DSA:3.40.50.1010 2 119 8.5E-6 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS16085 1c0564c4ec2103c14d16f521e47f5550 136 PANTHER PTHR36173:SF1 2 131 6.1E-38 T 14-09-2016 AMK01_RS16085 1c0564c4ec2103c14d16f521e47f5550 136 Pfam PF01850 PIN domain 2 120 2.4E-14 T 14-09-2016 IPR002716 PIN domain AMK01_RS07915 15b05925b318153853cb31d246e51bb0 367 PANTHER PTHR23289 14 348 1.9E-120 T 14-09-2016 AMK01_RS07915 15b05925b318153853cb31d246e51bb0 367 PANTHER PTHR23289:SF2 14 348 1.9E-120 T 14-09-2016 AMK01_RS07915 15b05925b318153853cb31d246e51bb0 367 Pfam PF02628 Cytochrome oxidase assembly protein 28 347 8.4E-115 T 14-09-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 AMK01_RS07915 15b05925b318153853cb31d246e51bb0 367 Hamap MF_01665 Heme A synthase [ctaA]. 23 356 25.822 T 14-09-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 AMK01_RS07810 36875cc8e4c1fd909fe998633d1e5a06 222 Gene3D G3DSA:1.10.150.240 29 62 2.7E-6 T 14-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK01_RS07810 36875cc8e4c1fd909fe998633d1e5a06 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 185 3.1E-15 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS07810 36875cc8e4c1fd909fe998633d1e5a06 222 PANTHER PTHR18901 10 190 1.7E-38 T 14-09-2016 AMK01_RS07810 36875cc8e4c1fd909fe998633d1e5a06 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 185 1.9E-12 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS07810 36875cc8e4c1fd909fe998633d1e5a06 222 SUPERFAMILY SSF56784 12 193 1.03E-37 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS07810 36875cc8e4c1fd909fe998633d1e5a06 222 Gene3D G3DSA:3.40.50.1000 76 198 2.7E-36 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS07810 36875cc8e4c1fd909fe998633d1e5a06 222 ProSitePatterns PS01228 Hypothetical cof family signature 1. 14 25 - T 14-09-2016 IPR000150 Cof protein GO:0016787 AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 SUPERFAMILY SSF47823 18 107 2.94E-11 T 14-09-2016 IPR010998 Integrase, Lambda-type, N-terminal AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 Pfam PF00589 Phage integrase family 149 296 9.0E-32 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 PANTHER PTHR30349:SF5 8 311 7.7E-79 T 14-09-2016 AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 SUPERFAMILY SSF56349 123 309 1.59E-45 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 PANTHER PTHR30349 8 311 7.7E-79 T 14-09-2016 AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 311 31.831 T 14-09-2016 IPR023009 Tyrosine recombinase XerC/XerD AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 Gene3D G3DSA:1.10.443.10 123 310 7.7E-46 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 18 103 4.8E-14 T 14-09-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMK01_RS19945 68baa1a2652aef4e383211ba37d73166 311 Gene3D G3DSA:1.10.150.130 16 108 9.6E-22 T 14-09-2016 IPR023109 Integrase/recombinase, N-terminal AMK01_RS13830 39c5f0467414a121870f3df823d72611 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 8.6E-12 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13830 39c5f0467414a121870f3df823d72611 194 SUPERFAMILY SSF46689 6 83 1.6E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13830 39c5f0467414a121870f3df823d72611 194 PANTHER PTHR30055:SF62 4 175 1.9E-68 T 14-09-2016 AMK01_RS13830 39c5f0467414a121870f3df823d72611 194 PANTHER PTHR30055 4 175 1.9E-68 T 14-09-2016 AMK01_RS13830 39c5f0467414a121870f3df823d72611 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.3E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13830 39c5f0467414a121870f3df823d72611 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.3E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13830 39c5f0467414a121870f3df823d72611 194 SUPERFAMILY SSF48498 78 183 5.56E-27 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS13830 39c5f0467414a121870f3df823d72611 194 Gene3D G3DSA:1.10.357.10 5 178 4.0E-41 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS09490 3891097e78eaf0606efb50b45954e7d6 630 PANTHER PTHR36837:SF2 54 629 1.3E-236 T 14-09-2016 AMK01_RS09490 3891097e78eaf0606efb50b45954e7d6 630 Gene3D G3DSA:3.40.50.1820 272 599 4.8E-31 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS09490 3891097e78eaf0606efb50b45954e7d6 630 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 141 313 1.5E-79 T 14-09-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- AMK01_RS09490 3891097e78eaf0606efb50b45954e7d6 630 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 101 627 2.1E-223 T 14-09-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 AMK01_RS09490 3891097e78eaf0606efb50b45954e7d6 630 PANTHER PTHR36837 54 629 1.3E-236 T 14-09-2016 AMK01_RS09490 3891097e78eaf0606efb50b45954e7d6 630 SUPERFAMILY SSF53474 284 560 1.21E-36 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS12825 0eda7d923c91e0c86fe4cae702a83650 368 Gene3D G3DSA:2.40.50.100 57 89 4.7E-19 T 14-09-2016 AMK01_RS12825 0eda7d923c91e0c86fe4cae702a83650 368 Gene3D G3DSA:2.40.50.100 209 241 4.7E-19 T 14-09-2016 AMK01_RS12825 0eda7d923c91e0c86fe4cae702a83650 368 PANTHER PTHR30386 19 367 1.3E-64 T 14-09-2016 AMK01_RS12825 0eda7d923c91e0c86fe4cae702a83650 368 SUPERFAMILY SSF111369 56 108 4.71E-8 T 14-09-2016 AMK01_RS12825 0eda7d923c91e0c86fe4cae702a83650 368 SUPERFAMILY SSF111369 120 176 6.54E-6 T 14-09-2016 AMK01_RS12825 0eda7d923c91e0c86fe4cae702a83650 368 PANTHER PTHR30386:SF7 19 367 1.3E-64 T 14-09-2016 AMK01_RS12825 0eda7d923c91e0c86fe4cae702a83650 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 286 3.0E-17 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS12825 0eda7d923c91e0c86fe4cae702a83650 368 SUPERFAMILY SSF111369 191 258 1.03E-6 T 14-09-2016 AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 Gene3D G3DSA:3.40.50.720 9 159 1.5E-7 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 Gene3D G3DSA:3.40.50.720 322 371 1.5E-7 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 9 468 34.292 T 14-09-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 8 429 5.3E-161 T 14-09-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 SUPERFAMILY SSF51905 8 375 1.04E-22 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 Pfam PF01134 Glucose inhibited division protein A 9 380 2.2E-106 T 14-09-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 PANTHER PTHR11806 1 428 1.5E-199 T 14-09-2016 AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 PANTHER PTHR11806:SF2 1 428 1.5E-199 T 14-09-2016 AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 Gene3D G3DSA:3.50.50.60 219 280 3.7E-4 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09280 1c09575fd13e4ce275ffaa0c500b3981 476 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 350 373 - T 14-09-2016 IPR020595 MnmG-related, conserved site AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 SUPERFAMILY SSF52540 4 242 6.36E-87 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 Gene3D G3DSA:2.40.50.100 343 351 3.9E-8 T 14-09-2016 AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 Gene3D G3DSA:2.40.50.100 239 283 3.9E-8 T 14-09-2016 AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 Gene3D G3DSA:3.40.50.300 4 234 9.4E-80 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 PANTHER PTHR24220 5 304 9.2E-159 T 14-09-2016 AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 Pfam PF08402 TOBE domain 280 349 1.4E-6 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 SMART SM00382 28 211 2.8E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 SUPERFAMILY SSF50331 236 356 1.43E-26 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 PANTHER PTHR24220:SF151 5 304 9.2E-159 T 14-09-2016 AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 Pfam PF00005 ABC transporter 20 161 3.2E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10515 c307192305302367d8e4a08933d114bb 357 Gene3D G3DSA:2.40.50.140 284 336 6.3E-11 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS11700 8ddedc03af91f7ba72b87ae52850aaae 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 3.1E-10 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS11700 8ddedc03af91f7ba72b87ae52850aaae 472 SUPERFAMILY SSF53383 72 463 1.5E-65 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS11700 8ddedc03af91f7ba72b87ae52850aaae 472 PANTHER PTHR11751 125 400 3.5E-37 T 14-09-2016 AMK01_RS11700 8ddedc03af91f7ba72b87ae52850aaae 472 Pfam PF00155 Aminotransferase class I and II 169 432 1.1E-24 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS11700 8ddedc03af91f7ba72b87ae52850aaae 472 SMART SM00345 19 78 2.4E-10 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS11700 8ddedc03af91f7ba72b87ae52850aaae 472 SUPERFAMILY SSF46785 12 85 9.72E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS11700 8ddedc03af91f7ba72b87ae52850aaae 472 Gene3D G3DSA:1.10.10.10 12 78 3.4E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS11700 8ddedc03af91f7ba72b87ae52850aaae 472 Gene3D G3DSA:3.40.640.10 157 354 6.1E-46 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS20845 307ae1caea37443214f1e0600724ffc7 480 Pfam PF07364 Metallopeptidase family M81 2 280 1.4E-98 T 14-09-2016 IPR015995 Microcystin LR degradation protein MlrC, N-terminal AMK01_RS20845 307ae1caea37443214f1e0600724ffc7 480 PIRSF PIRSF012702 1 472 9.2E-137 T 14-09-2016 IPR009197 Microcystin LR degradation protein MlrC AMK01_RS20845 307ae1caea37443214f1e0600724ffc7 480 Pfam PF07171 MlrC C-terminus 289 451 1.5E-48 T 14-09-2016 IPR010799 Microcystin LR degradation protein MlrC, C-terminal AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 SUPERFAMILY SSF100950 2 267 2.71E-77 T 14-09-2016 AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 SMART SM00882 4 249 2.0E-56 T 14-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 PANTHER PTHR13707:SF38 1 514 1.2E-167 T 14-09-2016 AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 PANTHER PTHR13707 1 514 1.2E-167 T 14-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 PIRSF PIRSF000858 1 528 3.5E-186 T 14-09-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 Pfam PF01144 Coenzyme A transferase 6 248 1.1E-29 T 14-09-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 Gene3D G3DSA:3.40.810.20 282 507 1.2E-50 T 14-09-2016 AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 SUPERFAMILY SSF100950 279 520 1.73E-63 T 14-09-2016 AMK01_RS08665 1c92eec059085e1f879c28381e84f0c3 537 Gene3D G3DSA:3.40.1080.10 1 248 1.3E-55 T 14-09-2016 AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 SMART SM00382 209 391 7.3E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 SUPERFAMILY SSF52540 189 501 1.37E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 500 2.5E-156 T 14-09-2016 IPR004482 Mg chelatase-related protein AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 500 1.1E-29 T 14-09-2016 IPR025158 Mg chelatase-related protein, C-terminal domain AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 PANTHER PTHR32039:SF7 1 500 3.0E-219 T 14-09-2016 IPR004482 Mg chelatase-related protein AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 394 1.4E-93 T 14-09-2016 IPR000523 Magnesium chelatase ChlI domain AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 Gene3D G3DSA:3.30.230.10 4 147 1.9E-28 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 Gene3D G3DSA:3.40.50.300 189 387 3.9E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 SUPERFAMILY SSF54211 7 169 1.29E-31 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 PANTHER PTHR32039 1 500 3.0E-219 T 14-09-2016 AMK01_RS01800 0bddf6f759b144da71553218956c3e06 510 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 140 6.4E-39 T 14-09-2016 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 PANTHER PTHR10909 1 478 8.2E-214 T 14-09-2016 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 1.7E-11 T 14-09-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 SUPERFAMILY SSF47203 287 475 3.22E-46 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 593 8.7E-37 T 14-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 PANTHER PTHR10909:SF154 1 478 8.2E-214 T 14-09-2016 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 Gene3D G3DSA:1.20.140.10 269 459 9.2E-44 T 14-09-2016 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 Gene3D G3DSA:1.10.540.10 35 159 3.3E-22 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 1.0E-17 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 7.5E-17 T 14-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 SUPERFAMILY SSF56645 37 278 2.62E-61 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 6.8E-15 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS02955 90a6106393be75cc5db0e4e7f259e8af 598 Gene3D G3DSA:2.40.110.10 162 268 1.1E-26 T 14-09-2016 AMK01_RS17485 484f98d8dc0937fa748acaa56a5e5113 591 Pfam PF00361 Proton-conducting membrane transporter 111 384 1.1E-43 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK01_RS17485 484f98d8dc0937fa748acaa56a5e5113 591 PANTHER PTHR22773 11 498 7.1E-180 T 14-09-2016 AMK01_RS17485 484f98d8dc0937fa748acaa56a5e5113 591 PANTHER PTHR22773:SF80 11 498 7.1E-180 T 14-09-2016 AMK01_RS17485 484f98d8dc0937fa748acaa56a5e5113 591 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 65 90 1.8E-7 T 14-09-2016 AMK01_RS17485 484f98d8dc0937fa748acaa56a5e5113 591 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 244 1.8E-7 T 14-09-2016 AMK01_RS17485 484f98d8dc0937fa748acaa56a5e5113 591 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 196 217 1.8E-7 T 14-09-2016 AMK01_RS17485 484f98d8dc0937fa748acaa56a5e5113 591 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 279 291 1.8E-7 T 14-09-2016 AMK01_RS15595 3c76cad5d2e1b0e14ff986b2e3884ebb 159 PANTHER PTHR22769 19 136 7.7E-20 T 14-09-2016 AMK01_RS15595 3c76cad5d2e1b0e14ff986b2e3884ebb 159 Pfam PF00293 NUDIX domain 31 141 6.2E-16 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS15595 3c76cad5d2e1b0e14ff986b2e3884ebb 159 SUPERFAMILY SSF55811 23 148 7.45E-26 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS15595 3c76cad5d2e1b0e14ff986b2e3884ebb 159 Gene3D G3DSA:3.90.79.10 29 153 3.2E-23 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS15595 3c76cad5d2e1b0e14ff986b2e3884ebb 159 PRINTS PR00502 NUDIX hydrolase family signature 54 68 2.9E-5 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS15595 3c76cad5d2e1b0e14ff986b2e3884ebb 159 PRINTS PR00502 NUDIX hydrolase family signature 68 83 2.9E-5 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS01395 70b1d8449c6db2bdd8798309c2ed3079 185 PANTHER PTHR23416 2 184 3.1E-71 T 14-09-2016 AMK01_RS01395 70b1d8449c6db2bdd8798309c2ed3079 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 166 1.1E-9 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS01395 70b1d8449c6db2bdd8798309c2ed3079 185 Pfam PF12464 Maltose acetyltransferase 8 57 4.1E-9 T 14-09-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMK01_RS01395 70b1d8449c6db2bdd8798309c2ed3079 185 Gene3D G3DSA:2.160.10.10 3 184 1.3E-57 T 14-09-2016 AMK01_RS01395 70b1d8449c6db2bdd8798309c2ed3079 185 SMART SM01266 6 60 1.8E-13 T 14-09-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AMK01_RS01395 70b1d8449c6db2bdd8798309c2ed3079 185 PANTHER PTHR23416:SF58 2 184 3.1E-71 T 14-09-2016 AMK01_RS01395 70b1d8449c6db2bdd8798309c2ed3079 185 SUPERFAMILY SSF51161 4 184 2.08E-53 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS01395 70b1d8449c6db2bdd8798309c2ed3079 185 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS11115 605753358910c8c098513cc6d0cbb030 297 PANTHER PTHR33490 3 287 3.3E-101 T 14-09-2016 AMK01_RS11115 605753358910c8c098513cc6d0cbb030 297 SMART SM00460 175 244 3.5E-18 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS11115 605753358910c8c098513cc6d0cbb030 297 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 78 9.7E-20 T 14-09-2016 IPR013589 Bacterial transglutaminase-like, N-terminal AMK01_RS11115 605753358910c8c098513cc6d0cbb030 297 Gene3D G3DSA:3.90.260.10 178 245 1.2E-11 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS11115 605753358910c8c098513cc6d0cbb030 297 SUPERFAMILY SSF54001 8 271 3.44E-39 T 14-09-2016 AMK01_RS11115 605753358910c8c098513cc6d0cbb030 297 Pfam PF01841 Transglutaminase-like superfamily 146 242 1.8E-19 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS11115 605753358910c8c098513cc6d0cbb030 297 PANTHER PTHR33490:SF2 3 287 3.3E-101 T 14-09-2016 AMK01_RS13710 55037893763ec1b133bd58259836c219 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 190 272 7.6E-21 T 14-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMK01_RS13710 55037893763ec1b133bd58259836c219 315 Pfam PF01548 Transposase 9 148 7.3E-25 T 14-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMK01_RS13710 55037893763ec1b133bd58259836c219 315 PANTHER PTHR33055 6 306 1.0E-29 T 14-09-2016 AMK01_RS15850 55037893763ec1b133bd58259836c219 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 190 272 7.6E-21 T 14-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMK01_RS15850 55037893763ec1b133bd58259836c219 315 Pfam PF01548 Transposase 9 148 7.3E-25 T 14-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMK01_RS15850 55037893763ec1b133bd58259836c219 315 PANTHER PTHR33055 6 306 1.0E-29 T 14-09-2016 AMK01_RS12595 55037893763ec1b133bd58259836c219 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 190 272 7.6E-21 T 14-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMK01_RS12595 55037893763ec1b133bd58259836c219 315 Pfam PF01548 Transposase 9 148 7.3E-25 T 14-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMK01_RS12595 55037893763ec1b133bd58259836c219 315 PANTHER PTHR33055 6 306 1.0E-29 T 14-09-2016 AMK01_RS02820 55037893763ec1b133bd58259836c219 315 Pfam PF02371 Transposase IS116/IS110/IS902 family 190 272 7.6E-21 T 14-09-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 AMK01_RS02820 55037893763ec1b133bd58259836c219 315 Pfam PF01548 Transposase 9 148 7.3E-25 T 14-09-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 AMK01_RS02820 55037893763ec1b133bd58259836c219 315 PANTHER PTHR33055 6 306 1.0E-29 T 14-09-2016 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 PANTHER PTHR10724 8 746 0.0 T 14-09-2016 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Gene3D G3DSA:1.10.3500.10 450 497 3.7E-94 T 14-09-2016 IPR023323 Tex-like domain AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Gene3D G3DSA:1.10.3500.10 113 320 3.7E-94 T 14-09-2016 IPR023323 Tex-like domain AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Pfam PF16921 Tex protein YqgF-like domain 325 450 2.4E-50 T 14-09-2016 IPR032639 Tex protein, YqgF-like domain AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Pfam PF00575 S1 RNA binding domain 649 719 4.8E-21 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Gene3D G3DSA:3.30.420.140 324 449 1.9E-50 T 14-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Gene3D G3DSA:1.10.150.310 498 629 3.6E-45 T 14-09-2016 IPR023097 Tex RuvX-like domain AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 SUPERFAMILY SSF47781 469 557 1.22E-26 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Pfam PF12836 Helix-hairpin-helix motif 490 554 3.3E-26 T 14-09-2016 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Gene3D G3DSA:2.40.50.140 633 720 2.9E-29 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 SUPERFAMILY SSF47781 559 630 7.56E-20 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 SMART SM00732 324 423 1.3E-36 T 14-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 SUPERFAMILY SSF50249 637 722 2.54E-26 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 SUPERFAMILY SSF53098 320 468 1.14E-48 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Gene3D G3DSA:1.10.10.650 9 112 1.9E-42 T 14-09-2016 IPR023319 Tex-like protein, HTH domain AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 PANTHER PTHR10724:SF1 8 746 0.0 T 14-09-2016 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 SMART SM00316 648 719 3.3E-26 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 Pfam PF09371 Tex-like protein N-terminal domain 12 193 5.9E-66 T 14-09-2016 IPR018974 Tex-like protein, N-terminal AMK01_RS04540 c9e0d59be30c9210fe16e6d41f3714af 769 SUPERFAMILY SSF158832 9 319 5.36E-109 T 14-09-2016 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 15 206 9.4E-69 T 14-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 SUPERFAMILY SSF50475 15 206 2.68E-64 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 PANTHER PTHR10851 13 206 6.2E-89 T 14-09-2016 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 27 111 5.0E-26 T 14-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 PANTHER PTHR10851:SF0 13 206 6.2E-89 T 14-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 5 206 37.41 T 14-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 Gene3D G3DSA:2.30.110.10 14 206 5.1E-80 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 PIRSF PIRSF000190 3 206 2.8E-71 T 14-09-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS04790 2f986d240ad3a9666bee243c1edc304d 206 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 164 206 5.5E-15 T 14-09-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS00735 efe5f559bde7aa55ba5af066bcf7deea 229 Gene3D G3DSA:3.30.1330.30 106 153 7.5E-4 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AMK01_RS00735 efe5f559bde7aa55ba5af066bcf7deea 229 PANTHER PTHR34215 3 217 1.7E-27 T 14-09-2016 AMK01_RS00735 efe5f559bde7aa55ba5af066bcf7deea 229 PANTHER PTHR34215:SF1 3 217 1.7E-27 T 14-09-2016 AMK01_RS00735 efe5f559bde7aa55ba5af066bcf7deea 229 SUPERFAMILY SSF55315 105 194 9.89E-9 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AMK01_RS00735 efe5f559bde7aa55ba5af066bcf7deea 229 Gene3D G3DSA:3.30.1230.10 20 105 2.1E-28 T 14-09-2016 IPR007393 Domain of unknown function DUF448 AMK01_RS00735 efe5f559bde7aa55ba5af066bcf7deea 229 Pfam PF04296 Protein of unknown function (DUF448) 23 91 1.2E-20 T 14-09-2016 IPR007393 Domain of unknown function DUF448 AMK01_RS00735 efe5f559bde7aa55ba5af066bcf7deea 229 SUPERFAMILY SSF64376 20 107 4.45E-24 T 14-09-2016 IPR007393 Domain of unknown function DUF448 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 Gene3D G3DSA:3.40.190.10 94 178 4.9E-30 T 14-09-2016 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 PANTHER PTHR30537:SF26 2 296 5.3E-85 T 14-09-2016 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 Pfam PF03466 LysR substrate binding domain 90 293 1.6E-32 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 PANTHER PTHR30537 2 296 5.3E-85 T 14-09-2016 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 Gene3D G3DSA:1.10.10.10 5 86 3.9E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.8E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.8E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.8E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.5E-20 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 SUPERFAMILY SSF53850 91 295 2.35E-36 T 14-09-2016 AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 SUPERFAMILY SSF46785 7 114 7.03E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15915 ce8b0cae0e80d8ea4cf6e701ec14752e 298 Gene3D G3DSA:3.40.190.10 179 259 1.9E-10 T 14-09-2016 AMK01_RS02525 fba7d0fa092b5c540740ceb7675af5ad 354 PANTHER PTHR32196 45 351 1.9E-71 T 14-09-2016 AMK01_RS02525 fba7d0fa092b5c540740ceb7675af5ad 354 PANTHER PTHR32196:SF21 45 351 1.9E-71 T 14-09-2016 AMK01_RS02525 fba7d0fa092b5c540740ceb7675af5ad 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 71 343 1.5E-47 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS28660 c4fbb0db5ceebbf871c8746253a312e6 314 Gene3D G3DSA:3.90.1200.10 24 174 4.3E-5 T 14-09-2016 AMK01_RS28660 c4fbb0db5ceebbf871c8746253a312e6 314 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 26 122 8.6E-22 T 14-09-2016 IPR018721 Protein of unknown function DUF2252 AMK01_RS28660 c4fbb0db5ceebbf871c8746253a312e6 314 PANTHER PTHR39441 1 132 3.3E-14 T 14-09-2016 AMK01_RS28660 c4fbb0db5ceebbf871c8746253a312e6 314 SUPERFAMILY SSF56112 39 148 8.16E-5 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 Pfam PF13180 PDZ domain 314 405 1.7E-16 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PANTHER PTHR22939 75 98 1.7E-110 T 14-09-2016 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PANTHER PTHR22939 123 444 1.7E-110 T 14-09-2016 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 Gene3D G3DSA:2.40.10.10 204 315 1.7E-44 T 14-09-2016 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 SUPERFAMILY SSF50494 74 306 4.67E-64 T 14-09-2016 IPR009003 Peptidase S1, PA clan AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 Gene3D G3DSA:2.30.42.10 475 546 1.2E-13 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PANTHER PTHR22939:SF79 123 444 1.7E-110 T 14-09-2016 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 Gene3D G3DSA:2.30.42.10 316 411 4.5E-29 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 SMART SM00228 314 396 1.7E-10 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 SMART SM00228 474 559 3.4E-7 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PANTHER PTHR22939:SF79 75 98 1.7E-110 T 14-09-2016 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 SUPERFAMILY SSF50156 474 547 8.02E-12 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 Gene3D G3DSA:2.40.10.10 76 203 3.5E-35 T 14-09-2016 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 Pfam PF13365 Trypsin-like peptidase domain 141 275 3.6E-33 T 14-09-2016 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PRINTS PR00834 HtrA/DegQ protease family signature 212 236 1.5E-55 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PRINTS PR00834 HtrA/DegQ protease family signature 150 162 1.5E-55 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PRINTS PR00834 HtrA/DegQ protease family signature 268 285 1.5E-55 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 1.5E-55 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PRINTS PR00834 HtrA/DegQ protease family signature 171 191 1.5E-55 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 PRINTS PR00834 HtrA/DegQ protease family signature 354 366 1.5E-55 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 SUPERFAMILY SSF50156 272 397 9.33E-23 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS14345 880d49ff8ea45e870fb49fa33d9b0dcc 570 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 77 418 1.1E-135 T 14-09-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 Gene3D G3DSA:3.50.50.60 2 101 6.6E-24 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 322 1.0E-52 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 Gene3D G3DSA:3.50.50.60 102 329 1.4E-25 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 301 8.2E-7 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 183 8.2E-7 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 8.2E-7 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 SUPERFAMILY SSF51905 3 210 6.29E-33 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 SUPERFAMILY SSF51905 157 336 7.17E-22 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PANTHER PTHR22912:SF180 1 178 2.4E-23 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PANTHER PTHR22912:SF180 194 307 2.4E-23 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 301 5.9E-10 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 5.9E-10 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 5.9E-10 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.9E-10 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PANTHER PTHR22912 1 178 2.4E-23 T 14-09-2016 AMK01_RS14170 8ac5ba626853afcd1fb3009492990b69 421 PANTHER PTHR22912 194 307 2.4E-23 T 14-09-2016 AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 ProSitePatterns PS00211 ABC transporters family signature. 611 625 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 Gene3D G3DSA:1.20.1560.10 145 456 3.9E-71 T 14-09-2016 AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 SUPERFAMILY SSF52540 466 710 2.72E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 SMART SM00382 499 685 2.0E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 PANTHER PTHR24221 141 710 3.6E-177 T 14-09-2016 AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 Pfam PF00664 ABC transporter transmembrane region 163 427 1.1E-37 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 Gene3D G3DSA:3.40.50.300 472 702 1.4E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 SUPERFAMILY SSF90123 145 457 1.31E-58 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 Pfam PF03412 Peptidase C39 family 9 132 7.1E-11 T 14-09-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 Gene3D G3DSA:3.90.70.10 6 134 9.4E-29 T 14-09-2016 AMK01_RS07030 05fb20b6c6a065e73c1788d0518d9abe 714 Pfam PF00005 ABC transporter 490 639 5.0E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 SMART SM00829 8 343 1.4E-7 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 PANTHER PTHR11695:SF526 13 343 2.7E-135 T 14-09-2016 AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 Pfam PF00107 Zinc-binding dehydrogenase 176 303 2.8E-28 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 5.0E-29 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 Gene3D G3DSA:3.90.180.10 1 169 2.3E-56 T 14-09-2016 IPR011032 GroES-like AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 PANTHER PTHR11695 13 343 2.7E-135 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 Gene3D G3DSA:3.40.50.720 170 290 4.1E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 SUPERFAMILY SSF51735 138 313 6.99E-42 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06130 f391db86f4edfc5b07bace7fffb63914 347 SUPERFAMILY SSF50129 1 167 1.24E-48 T 14-09-2016 IPR011032 GroES-like AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 SMART SM00342 18 101 1.0E-24 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 SUPERFAMILY SSF46689 3 52 4.12E-9 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 Pfam PF12833 Helix-turn-helix domain 25 103 1.2E-18 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 70 85 5.8E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 85 101 5.8E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 SUPERFAMILY SSF46689 54 106 3.63E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 PANTHER PTHR11019:SF56 1 109 6.6E-29 T 14-09-2016 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 Gene3D G3DSA:1.10.10.60 3 54 7.3E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 SUPERFAMILY SSF55136 126 275 1.01E-29 T 14-09-2016 IPR011256 Regulatory factor, effector binding domain AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 SMART SM00871 126 275 1.9E-29 T 14-09-2016 IPR010499 Bacterial transcription activator, effector binding AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 PANTHER PTHR11019 1 109 6.6E-29 T 14-09-2016 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 97 - T 14-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 Gene3D G3DSA:3.20.80.10 125 275 2.9E-33 T 14-09-2016 IPR011256 Regulatory factor, effector binding domain AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 Pfam PF06445 GyrI-like small molecule binding domain 127 275 8.2E-30 T 14-09-2016 IPR029442 GyrI-like small molecule binding domain AMK01_RS18870 c13f5faf1b74ad157b270d7ec3d9d869 275 Gene3D G3DSA:1.10.10.60 55 108 2.1E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 SMART SM00862 24 99 7.1E-17 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 Gene3D G3DSA:1.10.10.10 3 100 5.2E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 PANTHER PTHR26402 6 114 4.7E-15 T 14-09-2016 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 PANTHER PTHR26402:SF606 490 497 4.7E-15 T 14-09-2016 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 PANTHER PTHR26402:SF606 6 114 4.7E-15 T 14-09-2016 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 SUPERFAMILY SSF46894 2 100 7.37E-17 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 SUPERFAMILY SSF48452 328 476 9.1E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 PANTHER PTHR26402 490 497 4.7E-15 T 14-09-2016 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 99 9.6E-14 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS02475 1bf8b38a5f7139f42c3f55ab9b32c3a6 510 Gene3D G3DSA:1.25.40.10 286 475 6.5E-19 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10745 fbf035728e013895a9c3fb2d40cdecfb 101 Pfam PF03937 Flavinator of succinate dehydrogenase 15 86 2.3E-26 T 14-09-2016 IPR005631 Flavinator of succinate dehydrogenase AMK01_RS10745 fbf035728e013895a9c3fb2d40cdecfb 101 Gene3D G3DSA:1.10.150.250 11 90 3.0E-30 T 14-09-2016 IPR005631 Flavinator of succinate dehydrogenase AMK01_RS10745 fbf035728e013895a9c3fb2d40cdecfb 101 PANTHER PTHR12469 10 95 1.5E-25 T 14-09-2016 AMK01_RS10745 fbf035728e013895a9c3fb2d40cdecfb 101 SUPERFAMILY SSF109910 10 88 3.4E-25 T 14-09-2016 IPR005631 Flavinator of succinate dehydrogenase AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 Gene3D G3DSA:3.20.20.80 567 634 7.3E-59 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 Gene3D G3DSA:3.20.20.80 292 529 7.3E-59 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 SUPERFAMILY SSF49303 194 292 9.21E-16 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 SUPERFAMILY SSF51445 290 634 1.58E-96 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 PANTHER PTHR10066:SF12 1 135 1.1E-198 T 14-09-2016 AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 PANTHER PTHR10066:SF12 153 655 1.1E-198 T 14-09-2016 AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 SUPERFAMILY SSF49785 4 188 1.23E-51 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 Gene3D G3DSA:2.60.40.320 190 291 2.2E-16 T 14-09-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 Pfam PF00703 Glycosyl hydrolases family 2 232 292 5.0E-9 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 Gene3D G3DSA:2.60.120.260 5 186 1.0E-26 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 PANTHER PTHR10066 1 135 1.1E-198 T 14-09-2016 AMK01_RS02590 a140fd9fcc329e49b2028109258a3438 817 PANTHER PTHR10066 153 655 1.1E-198 T 14-09-2016 AMK01_RS14845 b8d8057df36eba86de2d71fae7a42438 262 PANTHER PTHR30193 11 262 5.0E-24 T 14-09-2016 AMK01_RS14845 b8d8057df36eba86de2d71fae7a42438 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 252 2.7E-9 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14845 b8d8057df36eba86de2d71fae7a42438 262 SUPERFAMILY SSF161098 4 253 2.09E-33 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14845 b8d8057df36eba86de2d71fae7a42438 262 Gene3D G3DSA:1.10.3720.10 8 254 5.1E-33 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14845 b8d8057df36eba86de2d71fae7a42438 262 PANTHER PTHR30193:SF20 11 262 5.0E-24 T 14-09-2016 AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 Gene3D G3DSA:3.40.250.10 5 153 1.3E-47 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 ProSitePatterns PS00380 Rhodanese signature 1. 44 55 - T 14-09-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 PANTHER PTHR11364 6 283 5.6E-119 T 14-09-2016 AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 SMART SM00450 10 134 1.3E-24 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 SMART SM00450 157 277 5.7E-14 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 SUPERFAMILY SSF52821 6 154 1.44E-44 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 SUPERFAMILY SSF52821 160 286 3.93E-34 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 Gene3D G3DSA:3.40.250.10 154 283 6.0E-40 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 Pfam PF00581 Rhodanese-like domain 161 272 8.3E-9 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS08960 3bde1c129310e98b1f4655dcdf279ed2 289 Pfam PF00581 Rhodanese-like domain 11 130 2.2E-18 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 Gene3D G3DSA:3.40.50.920 498 627 2.7E-35 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 PANTHER PTHR11624 23 217 4.3E-297 T 14-09-2016 IPR033247 Transketolase family AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 SUPERFAMILY SSF52518 317 506 2.29E-57 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 SMART SM00861 320 485 4.8E-63 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 14-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 PANTHER PTHR11624:SF20 23 217 4.3E-297 T 14-09-2016 AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 283 9.0E-116 T 14-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 PANTHER PTHR11624 241 631 4.3E-297 T 14-09-2016 IPR033247 Transketolase family AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.7E-38 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 15 626 1.2E-238 T 14-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 SUPERFAMILY SSF52922 492 629 5.37E-32 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 SUPERFAMILY SSF52518 243 382 3.61E-78 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 SUPERFAMILY SSF52518 7 198 3.61E-78 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 Gene3D G3DSA:3.40.50.970 242 335 1.1E-75 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 Gene3D G3DSA:3.40.50.970 25 200 1.1E-75 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 ProSitePatterns PS00802 Transketolase signature 2. 426 442 - T 14-09-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 PANTHER PTHR11624:SF20 241 631 4.3E-297 T 14-09-2016 AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 Gene3D G3DSA:3.40.50.970 336 497 7.0E-35 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 Pfam PF02780 Transketolase, C-terminal domain 497 620 6.0E-29 T 14-09-2016 IPR033248 Transketolase, C-terminal domain AMK01_RS04650 52fdb0f852174c5d52abd7411af48680 638 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 629 44.266 T 14-09-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS01940 bbb2951b11e6affdb56d861524439847 524 Pfam PF03109 ABC1 family 114 233 2.3E-29 T 14-09-2016 IPR004147 UbiB domain AMK01_RS01940 bbb2951b11e6affdb56d861524439847 524 PANTHER PTHR10566:SF79 44 444 5.6E-171 T 14-09-2016 AMK01_RS01940 bbb2951b11e6affdb56d861524439847 524 PANTHER PTHR10566 44 444 5.6E-171 T 14-09-2016 AMK01_RS01940 bbb2951b11e6affdb56d861524439847 524 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 444 3.8E-174 T 14-09-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 AMK01_RS01940 bbb2951b11e6affdb56d861524439847 524 Gene3D G3DSA:3.90.1200.10 260 313 1.0E-5 T 14-09-2016 AMK01_RS01940 bbb2951b11e6affdb56d861524439847 524 SUPERFAMILY SSF56112 196 435 1.63E-38 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS01940 bbb2951b11e6affdb56d861524439847 524 SUPERFAMILY SSF56112 96 161 1.63E-38 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS20290 d693ad0d53c0748ce012c564342d1534 202 SUPERFAMILY SSF52833 53 191 1.29E-30 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20290 d693ad0d53c0748ce012c564342d1534 202 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 22 195 4.8E-66 T 14-09-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AMK01_RS20290 d693ad0d53c0748ce012c564342d1534 202 Gene3D G3DSA:3.40.30.10 26 194 4.6E-36 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20290 d693ad0d53c0748ce012c564342d1534 202 PANTHER PTHR10681 22 195 3.5E-37 T 14-09-2016 AMK01_RS20290 d693ad0d53c0748ce012c564342d1534 202 PANTHER PTHR10681:SF107 22 195 3.5E-37 T 14-09-2016 AMK01_RS20290 d693ad0d53c0748ce012c564342d1534 202 Pfam PF08534 Redoxin 58 181 1.6E-12 T 14-09-2016 IPR013740 Redoxin GO:0016491 AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 SUPERFAMILY SSF50249 240 352 3.77E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 47 350 7.7E-100 T 14-09-2016 IPR014146 DNA ligase D, ligase domain AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 Gene3D G3DSA:3.30.470.30 70 185 3.5E-30 T 14-09-2016 AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 Gene3D G3DSA:2.40.50.140 237 352 6.3E-34 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 Gene3D G3DSA:3.30.1490.70 192 235 2.5E-20 T 14-09-2016 AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 Gene3D G3DSA:3.30.1490.70 40 69 2.5E-20 T 14-09-2016 AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 SUPERFAMILY SSF56091 43 234 1.42E-48 T 14-09-2016 AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 Pfam PF04679 ATP dependent DNA ligase C terminal region 254 343 2.0E-21 T 14-09-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 Pfam PF01068 ATP dependent DNA ligase domain 60 234 1.2E-28 T 14-09-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 PANTHER PTHR10459 41 353 1.6E-65 T 14-09-2016 AMK01_RS10125 565d14b08d25d31113bc08211390480d 353 PANTHER PTHR10459:SF70 41 353 1.6E-65 T 14-09-2016 AMK01_RS17715 afb13a793e960de9626adf6109986368 327 PIRSF PIRSF017082 1 326 6.3E-69 T 14-09-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK01_RS17715 afb13a793e960de9626adf6109986368 327 PANTHER PTHR30349:SF1 10 286 2.3E-81 T 14-09-2016 AMK01_RS17715 afb13a793e960de9626adf6109986368 327 SUPERFAMILY SSF53850 115 282 1.3E-9 T 14-09-2016 AMK01_RS17715 afb13a793e960de9626adf6109986368 327 PANTHER PTHR30349 10 286 2.3E-81 T 14-09-2016 AMK01_RS17715 afb13a793e960de9626adf6109986368 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 322 4.0E-72 T 14-09-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 3.4E-9 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 3.4E-9 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 SUPERFAMILY SSF48498 100 223 1.33E-31 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 PANTHER PTHR30328 8 225 6.2E-54 T 14-09-2016 AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 Gene3D G3DSA:1.10.10.60 20 79 3.7E-24 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 Gene3D G3DSA:1.10.357.10 80 224 3.0E-25 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 77 2.7E-16 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 PANTHER PTHR30328:SF16 8 225 6.2E-54 T 14-09-2016 AMK01_RS00420 858fb2f840c5e885195ef950680b4c5d 225 SUPERFAMILY SSF46689 20 103 5.49E-21 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 633 647 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 564 581 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 4.1E-91 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PANTHER PTHR32063:SF11 1 1052 0.0 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82693 40 134 2.28E-27 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 Gene3D G3DSA:3.30.70.1430 40 141 2.1E-33 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 Pfam PF00873 AcrB/AcrD/AcrF family 4 1038 0.0 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82714 734 819 4.19E-19 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82866 299 499 4.19E-51 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82693 578 683 1.03E-25 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 Gene3D G3DSA:3.30.70.1430 579 683 9.7E-28 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82866 843 1038 5.36E-47 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 Gene3D G3DSA:3.30.2090.10 734 820 3.5E-19 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82693 277 333 6.28E-28 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82693 137 184 6.28E-28 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 PANTHER PTHR32063 1 1052 0.0 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82693 820 869 7.32E-23 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82693 685 733 7.32E-23 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 Gene3D G3DSA:1.10.3850.10 826 1039 1.9E-62 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 SUPERFAMILY SSF82714 185 275 4.97E-23 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 Gene3D G3DSA:1.20.1640.10 296 509 1.4E-60 T 14-09-2016 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1049 0.0 T 14-09-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AMK01_RS17280 6c27ab9c3f033429567bc0446130e7fa 1061 Gene3D G3DSA:3.30.2090.10 184 278 2.0E-29 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 PANTHER PTHR20836 6 273 1.4E-78 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 155 172 - T 14-09-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.3E-32 T 14-09-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 270 8.2E-80 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 270 32.457 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 SUPERFAMILY SSF55347 131 241 3.92E-34 T 14-09-2016 AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 269 1.1E-41 T 14-09-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 Gene3D G3DSA:3.40.50.720 5 168 5.1E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 PIRSF PIRSF000161 4 273 4.9E-76 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 SUPERFAMILY SSF51735 5 130 9.53E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01005 953bb7bf15cafe0993c03441f9e95db5 274 SUPERFAMILY SSF51735 241 271 9.53E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 336 547 4.6E-41 T 14-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 SMART SM00863 171 221 4.5E-22 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 SUPERFAMILY SSF52954 546 647 1.12E-27 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 PANTHER PTHR11451 1 647 0.0 T 14-09-2016 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 SUPERFAMILY SSF55186 65 243 8.37E-64 T 14-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Gene3D G3DSA:3.30.54.20 132 188 1.9E-22 T 14-09-2016 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Gene3D G3DSA:3.40.50.800 550 648 4.2E-29 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 SUPERFAMILY SSF81271 6 63 2.42E-11 T 14-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 SUPERFAMILY SSF55681 245 545 1.24E-87 T 14-09-2016 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Gene3D G3DSA:3.30.980.10 189 226 7.5E-42 T 14-09-2016 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Gene3D G3DSA:3.30.980.10 69 131 7.5E-42 T 14-09-2016 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 653 32.134 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Gene3D G3DSA:3.30.930.10 244 549 3.9E-112 T 14-09-2016 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 PRINTS PR01047 Threonyl-tRNA synthetase signature 483 511 1.4E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 PRINTS PR01047 Threonyl-tRNA synthetase signature 375 398 1.4E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 PRINTS PR01047 Threonyl-tRNA synthetase signature 526 539 1.4E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 PRINTS PR01047 Threonyl-tRNA synthetase signature 342 370 1.4E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 PRINTS PR01047 Threonyl-tRNA synthetase signature 553 565 1.4E-53 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Pfam PF03129 Anticodon binding domain 560 646 3.8E-18 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Pfam PF02824 TGS domain 8 62 5.8E-6 T 14-09-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 PANTHER PTHR11451:SF31 1 647 0.0 T 14-09-2016 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 2.5E-12 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 Gene3D G3DSA:3.10.20.30 5 66 1.1E-17 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS11260 ad4d162d899c1b767ead8c24a573ce48 668 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 648 8.4E-205 T 14-09-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK01_RS17270 7a29d3a697b5fb2682558e1133332523 513 PANTHER PTHR10110 3 499 1.2E-68 T 14-09-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 AMK01_RS17270 7a29d3a697b5fb2682558e1133332523 513 PANTHER PTHR10110:SF86 3 499 1.2E-68 T 14-09-2016 AMK01_RS17270 7a29d3a697b5fb2682558e1133332523 513 Pfam PF00999 Sodium/hydrogen exchanger family 10 396 1.1E-41 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK01_RS08855 16717753d9ad4deae883b54caf281e45 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 84 1.4E-7 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS08855 16717753d9ad4deae883b54caf281e45 177 PANTHER PTHR20935 10 90 2.1E-13 T 14-09-2016 AMK01_RS08855 16717753d9ad4deae883b54caf281e45 177 SUPERFAMILY SSF53254 6 173 4.5E-22 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS08855 16717753d9ad4deae883b54caf281e45 177 Gene3D G3DSA:3.40.50.1240 7 176 1.1E-52 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS08855 16717753d9ad4deae883b54caf281e45 177 SMART SM00855 10 136 2.3E-5 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 Gene3D G3DSA:2.60.40.420 155 349 1.3E-24 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 Gene3D G3DSA:2.60.40.420 379 485 1.7E-33 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 ProSitePatterns PS00079 Multicopper oxidases signature 1. 462 482 - T 14-09-2016 IPR033138 Multicopper oxidases, conserved site AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 PANTHER PTHR11709:SF33 232 482 2.9E-46 T 14-09-2016 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 SUPERFAMILY SSF49503 21 148 1.16E-20 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 SUPERFAMILY SSF49503 154 334 3.36E-20 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 ProSitePatterns PS00080 Multicopper oxidases signature 2. 467 478 - T 14-09-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 PANTHER PTHR11709:SF33 34 191 2.9E-46 T 14-09-2016 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 Pfam PF07732 Multicopper oxidase 43 147 5.4E-18 T 14-09-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 Pfam PF07731 Multicopper oxidase 388 482 5.1E-27 T 14-09-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 Pfam PF00394 Multicopper oxidase 156 331 3.4E-10 T 14-09-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 Gene3D G3DSA:2.60.40.420 22 151 4.0E-18 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 PANTHER PTHR11709 34 191 2.9E-46 T 14-09-2016 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 PANTHER PTHR11709 232 482 2.9E-46 T 14-09-2016 AMK01_RS17455 49fc86cf294ab065e575e7ddb9b85410 488 SUPERFAMILY SSF49503 360 484 8.97E-32 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS17975 a50d068b4ad8b044bea9f01700642bf7 168 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK01_RS17975 a50d068b4ad8b044bea9f01700642bf7 168 PANTHER PTHR22769 14 128 3.7E-15 T 14-09-2016 AMK01_RS17975 a50d068b4ad8b044bea9f01700642bf7 168 PRINTS PR00502 NUDIX hydrolase family signature 55 70 2.8E-7 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS17975 a50d068b4ad8b044bea9f01700642bf7 168 PRINTS PR00502 NUDIX hydrolase family signature 41 55 2.8E-7 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS17975 a50d068b4ad8b044bea9f01700642bf7 168 Gene3D G3DSA:3.90.79.10 16 132 3.7E-31 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS17975 a50d068b4ad8b044bea9f01700642bf7 168 Pfam PF00293 NUDIX domain 18 133 6.6E-14 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS17975 a50d068b4ad8b044bea9f01700642bf7 168 PANTHER PTHR22769:SF30 14 128 3.7E-15 T 14-09-2016 AMK01_RS17975 a50d068b4ad8b044bea9f01700642bf7 168 SUPERFAMILY SSF55811 18 131 8.12E-25 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS17710 06c480b9e222f449a068e0f28a9b65a9 153 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 12 144 5.3E-19 T 14-09-2016 IPR009936 Protein of unknown function DUF1468 AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 SUPERFAMILY SSF53850 90 294 2.41E-33 T 14-09-2016 AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 Gene3D G3DSA:3.40.190.10 177 262 4.2E-15 T 14-09-2016 AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 Pfam PF03466 LysR substrate binding domain 89 293 1.5E-30 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 PANTHER PTHR30126:SF25 1 293 5.1E-108 T 14-09-2016 AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 Gene3D G3DSA:3.40.190.10 89 176 4.1E-11 T 14-09-2016 AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 PANTHER PTHR30126 1 293 5.1E-108 T 14-09-2016 AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.9E-15 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 Gene3D G3DSA:1.10.10.10 2 86 1.7E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09905 5a295aa3e3ec1ca5e5807ae4e1d27727 297 SUPERFAMILY SSF46785 1 108 1.15E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12380 8d9f4e7c739d40ad57c5cf023aaee8be 272 PANTHER PTHR10108:SF730 68 256 1.8E-16 T 14-09-2016 AMK01_RS12380 8d9f4e7c739d40ad57c5cf023aaee8be 272 Gene3D G3DSA:3.40.50.150 65 249 5.2E-30 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS12380 8d9f4e7c739d40ad57c5cf023aaee8be 272 Pfam PF13847 Methyltransferase domain 109 208 2.1E-12 T 14-09-2016 IPR025714 Methyltransferase domain AMK01_RS12380 8d9f4e7c739d40ad57c5cf023aaee8be 272 SMART SM00028 10 43 0.0075 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS12380 8d9f4e7c739d40ad57c5cf023aaee8be 272 Gene3D G3DSA:1.25.40.10 13 45 1.7E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12380 8d9f4e7c739d40ad57c5cf023aaee8be 272 PANTHER PTHR10108 68 256 1.8E-16 T 14-09-2016 AMK01_RS12380 8d9f4e7c739d40ad57c5cf023aaee8be 272 SUPERFAMILY SSF48452 5 44 2.95E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12380 8d9f4e7c739d40ad57c5cf023aaee8be 272 SUPERFAMILY SSF53335 71 269 4.74E-32 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 PANTHER PTHR23115:SF112 1 389 3.6E-248 T 14-09-2016 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 Pfam PF00009 Elongation factor Tu GTP binding domain 10 198 1.4E-56 T 14-09-2016 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 Pfam PF03143 Elongation factor Tu C-terminal domain 295 389 5.0E-33 T 14-09-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 Gene3D G3DSA:3.40.50.300 4 208 1.4E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 SUPERFAMILY SSF50465 299 391 3.17E-35 T 14-09-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 Gene3D G3DSA:2.40.30.10 209 295 9.8E-38 T 14-09-2016 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 391 7.1E-221 T 14-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 SUPERFAMILY SSF52540 6 216 6.59E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 Pfam PF03144 Elongation factor Tu domain 2 222 291 4.4E-16 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 SUPERFAMILY SSF50447 200 298 1.06E-29 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 391 59.599 T 14-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 Gene3D G3DSA:2.40.30.10 297 389 5.4E-45 T 14-09-2016 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 PANTHER PTHR23115 1 389 3.6E-248 T 14-09-2016 AMK01_RS08365 68b2adf0c90a69118ae09c5c39d4b8c7 391 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 144 1.6E-15 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 PANTHER PTHR23115:SF112 1 389 3.6E-248 T 14-09-2016 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 Pfam PF00009 Elongation factor Tu GTP binding domain 10 198 1.4E-56 T 14-09-2016 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 Pfam PF03143 Elongation factor Tu C-terminal domain 295 389 5.0E-33 T 14-09-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 Gene3D G3DSA:3.40.50.300 4 208 1.4E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 SUPERFAMILY SSF50465 299 391 3.17E-35 T 14-09-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 Gene3D G3DSA:2.40.30.10 209 295 9.8E-38 T 14-09-2016 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 391 7.1E-221 T 14-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.3E-24 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 SUPERFAMILY SSF52540 6 216 6.59E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 Pfam PF03144 Elongation factor Tu domain 2 222 291 4.4E-16 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 SUPERFAMILY SSF50447 200 298 1.06E-29 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 391 59.599 T 14-09-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 Gene3D G3DSA:2.40.30.10 297 389 5.4E-45 T 14-09-2016 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 PANTHER PTHR23115 1 389 3.6E-248 T 14-09-2016 AMK01_RS08440 68b2adf0c90a69118ae09c5c39d4b8c7 391 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 144 1.6E-15 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS17495 9999a0853f1ff5e4e7998e7922b050e2 479 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 468 1.4E-155 T 14-09-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMK01_RS17495 9999a0853f1ff5e4e7998e7922b050e2 479 PANTHER PTHR22773:SF41 1 476 6.1E-162 T 14-09-2016 AMK01_RS17495 9999a0853f1ff5e4e7998e7922b050e2 479 Pfam PF00361 Proton-conducting membrane transporter 126 414 3.5E-78 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK01_RS17495 9999a0853f1ff5e4e7998e7922b050e2 479 PANTHER PTHR22773 1 476 6.1E-162 T 14-09-2016 AMK01_RS17495 9999a0853f1ff5e4e7998e7922b050e2 479 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 469 18.362 T 14-09-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 PANTHER PTHR30218 9 704 0.0 T 14-09-2016 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 SUPERFAMILY SSF143724 134 333 2.55E-58 T 14-09-2016 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 SUPERFAMILY SSF56024 339 516 3.45E-57 T 14-09-2016 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 Gene3D G3DSA:3.30.870.10 521 705 8.3E-72 T 14-09-2016 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 Hamap MF_00347 Polyphosphate kinase [ppk]. 29 708 30.875 T 14-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 SUPERFAMILY SSF56024 521 705 4.93E-70 T 14-09-2016 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 Pfam PF13089 Polyphosphate kinase N-terminal domain 32 136 4.5E-34 T 14-09-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 31 706 3.0E-285 T 14-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 Pfam PF02503 Polyphosphate kinase middle domain 146 341 1.5E-54 T 14-09-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 Gene3D G3DSA:3.30.870.10 340 517 6.1E-78 T 14-09-2016 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 PIRSF PIRSF015589 6 721 5.0E-266 T 14-09-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 Gene3D G3DSA:3.30.1840.10 134 320 4.3E-57 T 14-09-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 PANTHER PTHR30218:SF0 9 704 0.0 T 14-09-2016 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 Pfam PF13090 Polyphosphate kinase C-terminal domain 351 704 1.7E-152 T 14-09-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AMK01_RS07595 60a027bc7a938420b41293bde3a8238b 734 SUPERFAMILY SSF140356 29 129 6.93E-34 T 14-09-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AMK01_RS12345 7414444fe64686e3e3da42632f5a9930 252 PANTHER PTHR10992 28 249 1.3E-33 T 14-09-2016 AMK01_RS12345 7414444fe64686e3e3da42632f5a9930 252 Pfam PF12697 Alpha/beta hydrolase family 31 241 1.1E-14 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS12345 7414444fe64686e3e3da42632f5a9930 252 Gene3D G3DSA:3.40.50.1820 28 249 4.4E-30 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS12345 7414444fe64686e3e3da42632f5a9930 252 PANTHER PTHR10992:SF832 28 249 1.3E-33 T 14-09-2016 AMK01_RS12345 7414444fe64686e3e3da42632f5a9930 252 SUPERFAMILY SSF53474 151 244 4.66E-26 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS12345 7414444fe64686e3e3da42632f5a9930 252 SUPERFAMILY SSF53474 23 119 4.66E-26 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS04885 967d91ea7a25b93171898ae36468a19f 251 PANTHER PTHR23427 10 244 2.6E-45 T 14-09-2016 AMK01_RS04885 967d91ea7a25b93171898ae36468a19f 251 PANTHER PTHR23427:SF2 10 244 2.6E-45 T 14-09-2016 AMK01_RS04885 967d91ea7a25b93171898ae36468a19f 251 Pfam PF02104 SURF1 family 23 231 1.5E-38 T 14-09-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 AMK01_RS16775 9e481eef8e9b997bdd555a8b76d67ee5 375 PANTHER PTHR30294:SF17 4 366 2.4E-113 T 14-09-2016 AMK01_RS16775 9e481eef8e9b997bdd555a8b76d67ee5 375 Pfam PF12698 ABC-2 family transporter protein 28 367 4.9E-46 T 14-09-2016 AMK01_RS16775 9e481eef8e9b997bdd555a8b76d67ee5 375 PANTHER PTHR30294 4 366 2.4E-113 T 14-09-2016 AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 SUPERFAMILY SSF53850 90 295 1.7E-43 T 14-09-2016 AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 SUPERFAMILY SSF46785 4 85 2.44E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.6E-15 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 Gene3D G3DSA:1.10.10.10 3 85 3.8E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 Pfam PF03466 LysR substrate binding domain 89 293 2.9E-39 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 PANTHER PTHR30537:SF17 1 297 9.5E-117 T 14-09-2016 AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 Gene3D G3DSA:3.40.190.10 174 263 6.3E-20 T 14-09-2016 AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 Gene3D G3DSA:3.40.190.10 92 173 2.0E-23 T 14-09-2016 AMK01_RS17230 1406113f2e241ea4296b00b405c0c8be 303 PANTHER PTHR30537 1 297 9.5E-117 T 14-09-2016 AMK01_RS02915 2f0493b87110bd1942ab98b96c530e51 193 Gene3D G3DSA:1.10.530.10 42 163 4.8E-11 T 14-09-2016 AMK01_RS02915 2f0493b87110bd1942ab98b96c530e51 193 Pfam PF01464 Transglycosylase SLT domain 47 158 2.2E-5 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AMK01_RS02915 2f0493b87110bd1942ab98b96c530e51 193 SUPERFAMILY SSF53955 13 174 1.47E-22 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS02765 ed70dda871c9b6cb10ebe7381f054e2a 130 SUPERFAMILY SSF110069 5 127 1.96E-49 T 14-09-2016 IPR007474 ApaG domain AMK01_RS02765 ed70dda871c9b6cb10ebe7381f054e2a 130 Gene3D G3DSA:2.60.40.1470 3 125 1.8E-46 T 14-09-2016 IPR007474 ApaG domain AMK01_RS02765 ed70dda871c9b6cb10ebe7381f054e2a 130 Hamap MF_00791 Protein ApaG [apaG]. 2 130 33.831 T 14-09-2016 IPR023065 Uncharacterised protein family ApaG AMK01_RS02765 ed70dda871c9b6cb10ebe7381f054e2a 130 Pfam PF04379 Protein of unknown function (DUF525) 19 104 4.5E-34 T 14-09-2016 IPR007474 ApaG domain AMK01_RS02765 ed70dda871c9b6cb10ebe7381f054e2a 130 PANTHER PTHR14289 6 124 2.9E-54 T 14-09-2016 AMK01_RS11360 f21977e44dc01b3b2978a619856a7830 130 PANTHER PTHR30204 1 123 7.2E-22 T 14-09-2016 AMK01_RS11360 f21977e44dc01b3b2978a619856a7830 130 Pfam PF13411 MerR HTH family regulatory protein 7 72 7.4E-17 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS11360 f21977e44dc01b3b2978a619856a7830 130 SMART SM00422 7 74 1.7E-14 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS11360 f21977e44dc01b3b2978a619856a7830 130 SUPERFAMILY SSF46955 5 116 1.1E-23 T 14-09-2016 IPR009061 Putative DNA-binding domain AMK01_RS11360 f21977e44dc01b3b2978a619856a7830 130 Gene3D G3DSA:1.10.1660.10 60 122 9.0E-12 T 14-09-2016 AMK01_RS11360 f21977e44dc01b3b2978a619856a7830 130 Gene3D G3DSA:1.10.1660.10 4 59 1.5E-20 T 14-09-2016 AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 SUPERFAMILY SSF52540 188 453 1.18E-54 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 Pfam PF00271 Helicase conserved C-terminal domain 480 587 2.7E-17 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 SUPERFAMILY SSF52540 452 653 1.11E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 Gene3D G3DSA:3.40.50.300 265 455 1.1E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 SMART SM00487 270 460 4.7E-30 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 SMART SM00490 506 588 3.4E-19 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 Gene3D G3DSA:2.40.50.140 56 151 1.7E-13 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 Pfam PF17191 RecG wedge domain 18 180 1.2E-8 T 14-09-2016 IPR033454 RecG, wedge domain AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 SUPERFAMILY SSF50249 8 184 1.06E-28 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 41 664 9.4E-206 T 14-09-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 Pfam PF00270 DEAD/DEAH box helicase 275 432 2.9E-18 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 PANTHER PTHR24031 304 603 5.7E-111 T 14-09-2016 AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 PANTHER PTHR24031 265 287 5.7E-111 T 14-09-2016 AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 PANTHER PTHR24031 625 699 5.7E-111 T 14-09-2016 AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 Gene3D G3DSA:3.40.50.300 456 637 4.0E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 PANTHER PTHR24031:SF249 304 603 5.7E-111 T 14-09-2016 AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 PANTHER PTHR24031:SF249 265 287 5.7E-111 T 14-09-2016 AMK01_RS10740 91ddeedcb0b1203e1d5666566549aafa 701 PANTHER PTHR24031:SF249 625 699 5.7E-111 T 14-09-2016 AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 393 52.349 T 14-09-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 239 248 - T 14-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 Pfam PF00155 Aminotransferase class I and II 43 384 1.1E-65 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 Gene3D G3DSA:3.90.1150.10 277 391 7.7E-30 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 7 395 4.4E-193 T 14-09-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 Gene3D G3DSA:3.40.640.10 62 276 6.9E-85 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 PANTHER PTHR13693 1 395 8.0E-246 T 14-09-2016 AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 SUPERFAMILY SSF53383 5 393 1.29E-115 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS15105 cd5d18e6e8e7404150a1adb39a446386 395 PANTHER PTHR13693:SF60 1 395 8.0E-246 T 14-09-2016 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 Pfam PF13377 Periplasmic binding protein-like domain 176 338 2.5E-33 T 14-09-2016 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 Gene3D G3DSA:3.40.50.2300 175 339 3.4E-44 T 14-09-2016 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 Gene3D G3DSA:3.40.50.2300 75 174 1.1E-11 T 14-09-2016 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 PANTHER PTHR30146:SF4 9 342 3.8E-68 T 14-09-2016 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 55 9.1E-10 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 SUPERFAMILY SSF47413 10 57 2.6E-9 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 SMART SM00354 10 74 7.2E-6 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 PANTHER PTHR30146 9 342 3.8E-68 T 14-09-2016 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 Gene3D G3DSA:1.10.260.40 10 55 6.7E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS10595 dcd96476a073374b4261f63d589802d7 354 SUPERFAMILY SSF53822 75 340 1.88E-47 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS04545 de48738aaa70f47e610ed23c265c1947 419 SUPERFAMILY SSF53335 123 385 4.82E-75 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04545 de48738aaa70f47e610ed23c265c1947 419 Pfam PF02353 Mycolic acid cyclopropane synthetase 116 380 3.6E-85 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04545 de48738aaa70f47e610ed23c265c1947 419 PIRSF PIRSF003085 1 404 1.1E-124 T 14-09-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AMK01_RS04545 de48738aaa70f47e610ed23c265c1947 419 PANTHER PTHR10108:SF743 318 399 5.2E-103 T 14-09-2016 AMK01_RS04545 de48738aaa70f47e610ed23c265c1947 419 PANTHER PTHR10108:SF743 51 301 5.2E-103 T 14-09-2016 AMK01_RS04545 de48738aaa70f47e610ed23c265c1947 419 Gene3D G3DSA:3.40.50.150 116 382 1.7E-89 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04545 de48738aaa70f47e610ed23c265c1947 419 PANTHER PTHR10108 318 399 5.2E-103 T 14-09-2016 AMK01_RS04545 de48738aaa70f47e610ed23c265c1947 419 PANTHER PTHR10108 51 301 5.2E-103 T 14-09-2016 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 Gene3D G3DSA:3.40.720.10 520 582 1.6E-118 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 Gene3D G3DSA:3.40.720.10 110 481 1.6E-118 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PANTHER PTHR11596:SF5 109 458 5.3E-109 T 14-09-2016 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PANTHER PTHR11596 479 584 5.3E-109 T 14-09-2016 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PRINTS PR00113 Alkaline phosphatase signature 357 386 4.2E-35 T 14-09-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PRINTS PR00113 Alkaline phosphatase signature 181 196 4.2E-35 T 14-09-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PRINTS PR00113 Alkaline phosphatase signature 270 280 4.2E-35 T 14-09-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PRINTS PR00113 Alkaline phosphatase signature 226 246 4.2E-35 T 14-09-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PRINTS PR00113 Alkaline phosphatase signature 126 146 4.2E-35 T 14-09-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 Pfam PF00245 Alkaline phosphatase 126 574 7.1E-76 T 14-09-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 SUPERFAMILY SSF53649 112 579 1.89E-112 T 14-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PANTHER PTHR11596 109 458 5.3E-109 T 14-09-2016 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 PANTHER PTHR11596:SF5 479 584 5.3E-109 T 14-09-2016 AMK01_RS21055 6a64a35f37667b597d7cf91c6f656c4e 584 SMART SM00098 127 581 3.1E-41 T 14-09-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMK01_RS08490 f3d1400c9853a94072fdbac80e5de59f 66 SUPERFAMILY SSF46561 1 63 9.94E-23 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08490 f3d1400c9853a94072fdbac80e5de59f 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-09-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08490 f3d1400c9853a94072fdbac80e5de59f 66 Gene3D G3DSA:1.10.287.310 1 62 5.8E-29 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08490 f3d1400c9853a94072fdbac80e5de59f 66 Pfam PF00831 Ribosomal L29 protein 4 60 4.0E-25 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08490 f3d1400c9853a94072fdbac80e5de59f 66 PANTHER PTHR10916 1 63 5.0E-26 T 14-09-2016 AMK01_RS08490 f3d1400c9853a94072fdbac80e5de59f 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.5E-23 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08490 f3d1400c9853a94072fdbac80e5de59f 66 PANTHER PTHR10916:SF0 1 63 5.0E-26 T 14-09-2016 AMK01_RS08490 f3d1400c9853a94072fdbac80e5de59f 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.538 T 14-09-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 PANTHER PTHR24221 7 623 2.1E-260 T 14-09-2016 AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 Pfam PF00664 ABC transporter transmembrane region 48 315 1.0E-6 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 PANTHER PTHR24221:SF203 7 623 2.1E-260 T 14-09-2016 AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 SMART SM00382 396 587 2.9E-21 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 Gene3D G3DSA:3.40.50.300 370 606 5.4E-80 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 SUPERFAMILY SSF90123 26 351 1.31E-42 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 Gene3D G3DSA:1.20.1560.10 33 358 1.4E-36 T 14-09-2016 AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 SUPERFAMILY SSF52540 359 611 2.86E-87 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 ProSitePatterns PS00211 ABC transporters family signature. 513 527 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS15500 79105007e413a09ec353146d06d06a22 637 Pfam PF00005 ABC transporter 388 541 2.0E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 SUPERFAMILY SSF103190 75 208 1.6E-15 T 14-09-2016 IPR029151 Periplasmic sensor domain-like AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 571 8.8E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 585 8.8E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 604 8.8E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 622 8.8E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 Pfam PF00512 His Kinase A (phospho-acceptor) domain 408 474 1.3E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PIRSF PIRSF036431 14 624 2.1E-201 T 14-09-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 518 623 2.1E-20 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PANTHER PTHR24423:SF485 384 621 4.2E-59 T 14-09-2016 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PANTHER PTHR24423:SF485 276 314 4.2E-59 T 14-09-2016 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 Gene3D G3DSA:3.30.565.10 477 621 2.8E-35 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PANTHER PTHR24423 276 314 4.2E-59 T 14-09-2016 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 PANTHER PTHR24423 384 621 4.2E-59 T 14-09-2016 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 Gene3D G3DSA:1.10.287.130 406 471 7.5E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 SMART SM00388 407 475 1.5E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 SMART SM00387 517 624 5.9E-28 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 SUPERFAMILY SSF55874 478 621 3.8E-33 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS15200 548dac1e3f9911b35f78693333cf5aea 624 SUPERFAMILY SSF47384 397 475 1.2E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS07905 4aafccaed08715d0393db7f246946e23 413 Pfam PF13480 Acetyltransferase (GNAT) domain 203 358 5.7E-29 T 14-09-2016 AMK01_RS07905 4aafccaed08715d0393db7f246946e23 413 SUPERFAMILY SSF55729 192 373 1.48E-17 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS03390 08349981076a48642a6729c618b81813 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 2.4E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03390 08349981076a48642a6729c618b81813 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 2.4E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03390 08349981076a48642a6729c618b81813 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 2.4E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03390 08349981076a48642a6729c618b81813 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 2.4E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03390 08349981076a48642a6729c618b81813 758 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 606 7.5E-19 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03390 08349981076a48642a6729c618b81813 758 Gene3D G3DSA:3.30.565.10 425 606 7.3E-36 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03390 08349981076a48642a6729c618b81813 758 SMART SM00073 3 100 1.9E-35 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS03390 08349981076a48642a6729c618b81813 758 PANTHER PTHR22617:SF20 1 756 5.5E-200 T 14-09-2016 AMK01_RS03390 08349981076a48642a6729c618b81813 758 SMART SM01231 358 421 2.9E-18 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK01_RS03390 08349981076a48642a6729c618b81813 758 SMART SM00260 599 740 5.6E-41 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS03390 08349981076a48642a6729c618b81813 758 Pfam PF01584 CheW-like domain 612 741 6.2E-22 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS03390 08349981076a48642a6729c618b81813 758 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 359 421 1.8E-17 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK01_RS03390 08349981076a48642a6729c618b81813 758 Gene3D G3DSA:2.30.30.40 695 738 7.0E-21 T 14-09-2016 AMK01_RS03390 08349981076a48642a6729c618b81813 758 Gene3D G3DSA:2.30.30.40 607 628 7.0E-21 T 14-09-2016 AMK01_RS03390 08349981076a48642a6729c618b81813 758 SMART SM00387 466 607 5.7E-28 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03390 08349981076a48642a6729c618b81813 758 Pfam PF01627 Hpt domain 5 95 9.5E-19 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS03390 08349981076a48642a6729c618b81813 758 Gene3D G3DSA:1.20.120.160 1 141 6.2E-39 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS03390 08349981076a48642a6729c618b81813 758 SUPERFAMILY SSF47384 359 422 9.81E-14 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03390 08349981076a48642a6729c618b81813 758 SUPERFAMILY SSF47226 2 127 6.67E-30 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS03390 08349981076a48642a6729c618b81813 758 PANTHER PTHR22617 1 756 5.5E-200 T 14-09-2016 AMK01_RS03390 08349981076a48642a6729c618b81813 758 SUPERFAMILY SSF55874 425 605 3.01E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03390 08349981076a48642a6729c618b81813 758 SUPERFAMILY SSF50341 606 739 5.1E-26 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS03390 08349981076a48642a6729c618b81813 758 Gene3D G3DSA:1.10.287.560 358 422 7.0E-20 T 14-09-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 Pfam PF00270 DEAD/DEAH box helicase 625 785 8.3E-16 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 150 1098 0.0 T 14-09-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 Gene3D G3DSA:3.40.50.300 609 806 3.1E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 Gene3D G3DSA:3.40.50.300 807 983 2.2E-31 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 Pfam PF00271 Helicase conserved C-terminal domain 825 929 1.1E-16 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SMART SM00490 846 930 3.8E-19 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 Pfam PF02559 CarD-like/TRCF domain 501 594 1.6E-22 T 14-09-2016 IPR003711 CarD-like/TRCF domain AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 Gene3D G3DSA:3.30.2060.10 135 207 3.1E-13 T 14-09-2016 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1121 27.711 T 14-09-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 Pfam PF03461 TRCF domain 1029 1118 4.3E-25 T 14-09-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SUPERFAMILY SSF52540 545 804 5.28E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SMART SM00487 620 810 6.5E-31 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SUPERFAMILY SSF52540 16 355 3.98E-83 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 PANTHER PTHR14025:SF21 408 1161 0.0 T 14-09-2016 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SUPERFAMILY SSF143517 1015 1165 8.11E-41 T 14-09-2016 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SUPERFAMILY SSF52540 802 1010 3.97E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SUPERFAMILY SSF141259 493 568 9.55E-19 T 14-09-2016 IPR003711 CarD-like/TRCF domain AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SUPERFAMILY SSF52540 390 490 1.44E-20 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SMART SM01058 500 596 7.0E-42 T 14-09-2016 IPR003711 CarD-like/TRCF domain AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 SMART SM00982 1025 1125 6.1E-42 T 14-09-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMK01_RS10750 4ce298fda709fd77cb9def9933918fae 1167 PANTHER PTHR14025 408 1161 0.0 T 14-09-2016 AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 Gene3D G3DSA:3.40.50.2300 22 144 4.5E-33 T 14-09-2016 AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 SMART SM00862 169 244 2.4E-30 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 PANTHER PTHR26402 24 247 1.1E-93 T 14-09-2016 AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 SMART SM00448 24 135 5.4E-34 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 SUPERFAMILY SSF52172 23 203 7.33E-34 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 169 244 2.3E-28 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 Gene3D G3DSA:1.10.10.10 145 245 1.9E-37 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 PANTHER PTHR26402:SF578 24 247 1.1E-93 T 14-09-2016 AMK01_RS06610 5a77694416c26b6912d464a0fecc3cfe 248 Pfam PF00072 Response regulator receiver domain 26 135 6.4E-23 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 PANTHER PTHR22604:SF128 1 64 3.9E-43 T 14-09-2016 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 1 65 1.3E-10 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 Gene3D G3DSA:3.30.360.10 118 168 1.2E-34 T 14-09-2016 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 Gene3D G3DSA:3.30.360.10 1 67 1.2E-34 T 14-09-2016 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 PANTHER PTHR22604 1 64 3.9E-43 T 14-09-2016 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 SUPERFAMILY SSF55347 117 169 5.67E-22 T 14-09-2016 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 SUPERFAMILY SSF55347 1 68 5.67E-22 T 14-09-2016 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 PANTHER PTHR22604 116 168 3.9E-43 T 14-09-2016 AMK01_RS27490 c2786d670b1113406f58ed9d1f9e6401 180 PANTHER PTHR22604:SF128 116 168 3.9E-43 T 14-09-2016 AMK01_RS01050 92aff95cec4bdae12e64402c906baf97 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 283 6.7E-41 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK01_RS01050 92aff95cec4bdae12e64402c906baf97 319 Gene3D G3DSA:3.40.50.720 116 286 6.0E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01050 92aff95cec4bdae12e64402c906baf97 319 SUPERFAMILY SSF52283 20 121 8.02E-8 T 14-09-2016 AMK01_RS01050 92aff95cec4bdae12e64402c906baf97 319 Gene3D G3DSA:3.40.50.720 26 67 4.3E-5 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01050 92aff95cec4bdae12e64402c906baf97 319 PANTHER PTHR10996 32 315 9.7E-82 T 14-09-2016 AMK01_RS01050 92aff95cec4bdae12e64402c906baf97 319 SUPERFAMILY SSF51735 102 284 1.0E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01050 92aff95cec4bdae12e64402c906baf97 319 PANTHER PTHR10996:SF114 32 315 9.7E-82 T 14-09-2016 AMK01_RS01050 92aff95cec4bdae12e64402c906baf97 319 Gene3D G3DSA:3.40.50.720 68 115 3.0E-4 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19665 dcd584ad199e3117bb67a4bc81ccc7ce 377 SUPERFAMILY SSF56796 12 373 9.03E-109 T 14-09-2016 AMK01_RS19665 dcd584ad199e3117bb67a4bc81ccc7ce 377 PIRSF PIRSF001455 24 375 4.4E-100 T 14-09-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS19665 dcd584ad199e3117bb67a4bc81ccc7ce 377 Gene3D G3DSA:3.40.50.1970 12 183 3.9E-64 T 14-09-2016 AMK01_RS19665 dcd584ad199e3117bb67a4bc81ccc7ce 377 PANTHER PTHR21090 3 374 2.6E-157 T 14-09-2016 AMK01_RS19665 dcd584ad199e3117bb67a4bc81ccc7ce 377 Pfam PF01761 3-dehydroquinate synthase 77 341 2.4E-99 T 14-09-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS19665 dcd584ad199e3117bb67a4bc81ccc7ce 377 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 11 374 40.69 T 14-09-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS19665 dcd584ad199e3117bb67a4bc81ccc7ce 377 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 22 370 3.5E-108 T 14-09-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS19665 dcd584ad199e3117bb67a4bc81ccc7ce 377 Gene3D G3DSA:1.20.1090.10 184 373 8.3E-70 T 14-09-2016 AMK01_RS12230 f9d053290132fd2a5ffb9ceb16071737 250 Pfam PF00005 ABC transporter 27 158 2.8E-23 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12230 f9d053290132fd2a5ffb9ceb16071737 250 PANTHER PTHR24220 5 235 3.9E-61 T 14-09-2016 AMK01_RS12230 f9d053290132fd2a5ffb9ceb16071737 250 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12230 f9d053290132fd2a5ffb9ceb16071737 250 SMART SM00382 29 207 9.3E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12230 f9d053290132fd2a5ffb9ceb16071737 250 SUPERFAMILY SSF52540 4 220 8.34E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12230 f9d053290132fd2a5ffb9ceb16071737 250 Gene3D G3DSA:3.40.50.300 3 226 1.8E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12230 f9d053290132fd2a5ffb9ceb16071737 250 PANTHER PTHR24220:SF73 5 235 3.9E-61 T 14-09-2016 AMK01_RS00855 b25aa7e1e888e0094a01fbb0269e420a 272 SUPERFAMILY SSF69572 18 266 2.88E-76 T 14-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK01_RS00855 b25aa7e1e888e0094a01fbb0269e420a 272 PANTHER PTHR10953 7 266 3.8E-90 T 14-09-2016 AMK01_RS00855 b25aa7e1e888e0094a01fbb0269e420a 272 Gene3D G3DSA:3.40.50.720 21 267 6.2E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00855 b25aa7e1e888e0094a01fbb0269e420a 272 PANTHER PTHR10953:SF153 7 266 3.8E-90 T 14-09-2016 AMK01_RS00855 b25aa7e1e888e0094a01fbb0269e420a 272 Pfam PF00899 ThiF family 29 267 3.6E-55 T 14-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK01_RS13135 b58f4a8ea7508d70dc3595ebf2fd1aba 262 Pfam PF05988 Bacterial protein of unknown function (DUF899) 14 232 1.0E-79 T 14-09-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like AMK01_RS13135 b58f4a8ea7508d70dc3595ebf2fd1aba 262 SUPERFAMILY SSF52833 94 186 2.61E-5 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 Pfam PF00989 PAS fold 392 496 7.5E-7 T 14-09-2016 IPR013767 PAS fold GO:0006355 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 SMART SM00388 507 579 5.8E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 Pfam PF00512 His Kinase A (phospho-acceptor) domain 509 576 8.0E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 Pfam PF00672 HAMP domain 307 373 3.3E-10 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 Gene3D G3DSA:3.30.565.10 565 740 8.0E-29 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 PANTHER PTHR24423 665 736 2.6E-72 T 14-09-2016 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 PANTHER PTHR24423 369 647 2.6E-72 T 14-09-2016 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 SMART SM00304 324 377 1.4E-7 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 SUPERFAMILY SSF47384 502 577 3.34E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 SMART SM00387 619 739 2.2E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 712 6.8E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 679 6.8E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 736 6.8E-12 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 620 737 1.8E-17 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 SUPERFAMILY SSF55874 572 738 1.3E-28 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 Gene3D G3DSA:1.10.287.130 502 564 4.9E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 SUPERFAMILY SSF158472 325 374 3.66E-7 T 14-09-2016 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 PANTHER PTHR24423:SF520 665 736 2.6E-72 T 14-09-2016 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 PANTHER PTHR24423:SF520 369 647 2.6E-72 T 14-09-2016 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 SMART SM00091 391 457 0.0023 T 14-09-2016 IPR000014 PAS domain AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 Gene3D G3DSA:3.30.450.20 388 497 1.6E-13 T 14-09-2016 AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 SUPERFAMILY SSF55785 378 497 2.74E-9 T 14-09-2016 IPR000014 PAS domain AMK01_RS10000 8e65d494da212069b66fbbca0c7f74ea 756 PIRSF PIRSF037532 9 742 3.8E-236 T 14-09-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator AMK01_RS00105 440dd36687ade8612bddd42a12b27913 222 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 213 37.414 T 14-09-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AMK01_RS00105 440dd36687ade8612bddd42a12b27913 222 Gene3D G3DSA:3.20.20.70 4 212 4.7E-63 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS00105 440dd36687ade8612bddd42a12b27913 222 SUPERFAMILY SSF51366 4 210 5.49E-57 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK01_RS00105 440dd36687ade8612bddd42a12b27913 222 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 208 3.6E-44 T 14-09-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AMK01_RS00105 440dd36687ade8612bddd42a12b27913 222 PANTHER PTHR22854:SF6 5 214 1.2E-49 T 14-09-2016 AMK01_RS00105 440dd36687ade8612bddd42a12b27913 222 PANTHER PTHR22854 5 214 1.2E-49 T 14-09-2016 AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 SUPERFAMILY SSF53850 95 293 4.16E-35 T 14-09-2016 AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 Pfam PF03466 LysR substrate binding domain 95 290 7.6E-33 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 PANTHER PTHR30537 1 291 6.4E-68 T 14-09-2016 AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 9.7E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 Gene3D G3DSA:1.10.10.10 2 85 4.9E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 Gene3D G3DSA:3.40.190.10 96 176 1.2E-28 T 14-09-2016 AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 PANTHER PTHR30537:SF26 1 291 6.4E-68 T 14-09-2016 AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 Gene3D G3DSA:3.40.190.10 177 258 7.5E-17 T 14-09-2016 AMK01_RS05940 1bf6060abfdb86dc2e4573d72745edce 298 SUPERFAMILY SSF46785 7 114 1.54E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 246 401 31.478 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 Gene3D G3DSA:3.90.550.10 14 236 2.0E-65 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 280 295 - T 14-09-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 SUPERFAMILY SSF53448 14 236 1.91E-54 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 Gene3D G3DSA:3.30.1330.50 245 400 9.3E-65 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 10 402 43.847 T 14-09-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 Pfam PF02542 YgbB family 247 399 3.2E-57 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 SUPERFAMILY SSF69765 246 402 1.44E-60 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 236 2.4E-70 T 14-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 11 246 28.56 T 14-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 247 400 2.9E-57 T 14-09-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 PANTHER PTHR32125:SF4 14 253 1.0E-58 T 14-09-2016 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 113 120 - T 14-09-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 236 1.7E-62 T 14-09-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS09855 d6d7b1efda7bd746136218f284859c24 406 PANTHER PTHR32125 14 253 1.0E-58 T 14-09-2016 AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 SUPERFAMILY SSF53187 335 410 2.64E-49 T 14-09-2016 AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 SUPERFAMILY SSF53187 191 288 2.64E-49 T 14-09-2016 AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 193 408 5.7E-44 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 PANTHER PTHR30404 52 413 9.5E-77 T 14-09-2016 AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 Pfam PF11741 AMIN domain 52 139 1.5E-11 T 14-09-2016 IPR021731 AMIN domain AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 Gene3D G3DSA:3.40.630.40 336 410 2.0E-53 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 Gene3D G3DSA:3.40.630.40 191 289 2.0E-53 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 PANTHER PTHR30404:SF0 52 413 9.5E-77 T 14-09-2016 AMK01_RS08305 523bd849507cbb1086a8e097e1fe4f4f 419 SMART SM00646 254 408 6.2E-41 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK01_RS09900 18bd275c35864ae50c6724bdd735db4b 395 PANTHER PTHR23534 1 390 1.5E-66 T 14-09-2016 AMK01_RS09900 18bd275c35864ae50c6724bdd735db4b 395 SUPERFAMILY SSF103473 5 386 3.66E-34 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS09900 18bd275c35864ae50c6724bdd735db4b 395 Pfam PF07690 Major Facilitator Superfamily 34 345 1.7E-23 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS09900 18bd275c35864ae50c6724bdd735db4b 395 Gene3D G3DSA:1.20.1250.20 213 384 1.5E-11 T 14-09-2016 AMK01_RS09900 18bd275c35864ae50c6724bdd735db4b 395 Gene3D G3DSA:1.20.1250.20 20 197 6.6E-10 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887:SF350 313 382 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887:SF350 254 296 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887:SF350 698 855 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 SUPERFAMILY SSF52540 557 585 2.95E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 SUPERFAMILY SSF52540 416 441 2.95E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 SUPERFAMILY SSF52540 332 375 2.95E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 SUPERFAMILY SSF52540 795 1101 2.95E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 Gene3D G3DSA:3.40.50.300 319 376 3.3E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 Gene3D G3DSA:3.40.50.300 413 506 3.3E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 Gene3D G3DSA:3.40.50.300 816 936 3.3E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887:SF350 413 444 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887:SF350 885 1015 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887:SF350 1037 1129 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887 313 382 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 Pfam PF13087 AAA domain 918 1094 5.9E-13 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 Gene3D G3DSA:3.40.50.300 1020 1098 8.6E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887 413 444 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887 254 296 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887 885 1015 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887 698 855 1.1E-111 T 14-09-2016 AMK01_RS00335 a87fec6ab56f9df932f0c3bd6406542a 1139 PANTHER PTHR10887 1037 1129 1.1E-111 T 14-09-2016 AMK01_RS04425 071af7d2820bac81768059ea8fba0b93 229 PANTHER PTHR10954 31 216 3.2E-64 T 14-09-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 AMK01_RS04425 071af7d2820bac81768059ea8fba0b93 229 Hamap MF_00052_B Ribonuclease HII [rnhB]. 35 214 36.554 T 14-09-2016 IPR022898 Ribonuclease HII GO:0004523 AMK01_RS04425 071af7d2820bac81768059ea8fba0b93 229 Gene3D G3DSA:3.30.420.10 36 175 1.8E-42 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS04425 071af7d2820bac81768059ea8fba0b93 229 Pfam PF01351 Ribonuclease HII 37 212 9.7E-39 T 14-09-2016 IPR024567 Ribonuclease HII/HIII domain AMK01_RS04425 071af7d2820bac81768059ea8fba0b93 229 SUPERFAMILY SSF53098 26 219 1.82E-65 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 PANTHER PTHR11661 1 143 1.8E-58 T 14-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 SUPERFAMILY SSF54747 3 72 7.72E-30 T 14-09-2016 IPR020784 Ribosomal protein L11, N-terminal AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 3.0E-17 T 14-09-2016 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 SMART SM00649 9 142 1.3E-74 T 14-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 Gene3D G3DSA:3.30.1550.10 2 72 2.0E-37 T 14-09-2016 IPR020784 Ribosomal protein L11, N-terminal AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 143 29.448 T 14-09-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 SUPERFAMILY SSF46906 68 141 1.96E-21 T 14-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 Gene3D G3DSA:1.10.10.250 73 142 5.2E-26 T 14-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 9.7E-63 T 14-09-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 141 4.7E-19 T 14-09-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK01_RS08390 831543a3752a124c830159c8b0f87f57 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 67 1.2E-29 T 14-09-2016 IPR020784 Ribosomal protein L11, N-terminal AMK01_RS18990 9357bb2b85dbbde4addb89dd197e03ef 284 PANTHER PTHR30514 16 229 1.8E-17 T 14-09-2016 AMK01_RS18990 9357bb2b85dbbde4addb89dd197e03ef 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 74 3.0E-7 T 14-09-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMK01_RS18990 9357bb2b85dbbde4addb89dd197e03ef 284 Gene3D G3DSA:1.10.10.10 3 77 5.3E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18990 9357bb2b85dbbde4addb89dd197e03ef 284 Gene3D G3DSA:3.40.50.10490 104 238 3.7E-4 T 14-09-2016 AMK01_RS18990 9357bb2b85dbbde4addb89dd197e03ef 284 SUPERFAMILY SSF46689 3 77 6.45E-13 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18990 9357bb2b85dbbde4addb89dd197e03ef 284 SUPERFAMILY SSF53697 104 259 1.38E-6 T 14-09-2016 AMK01_RS18990 9357bb2b85dbbde4addb89dd197e03ef 284 PANTHER PTHR30514:SF3 16 229 1.8E-17 T 14-09-2016 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 302 4.6E-27 T 14-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PANTHER PTHR11405 3 309 1.4E-130 T 14-09-2016 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 Gene3D G3DSA:3.40.50.1370 144 283 7.0E-52 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 304 2.9E-95 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 137 148 4.7E-21 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 4.7E-21 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 4.7E-21 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 4.7E-21 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 Gene3D G3DSA:3.40.50.1370 5 143 2.7E-48 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PANTHER PTHR11405:SF16 3 309 1.4E-130 T 14-09-2016 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 SUPERFAMILY SSF53671 2 304 4.58E-98 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 6 306 39.67 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 43 65 5.3E-29 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 136 153 5.3E-29 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 5.3E-29 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 5.3E-29 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 5.3E-29 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 5.3E-29 T 14-09-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08290 9ab76a3b55e42b7c854de46ba5d033de 318 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 149 1.0E-36 T 14-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SUPERFAMILY SSF55874 535 712 1.13E-41 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SUPERFAMILY SSF55785 82 205 5.93E-10 T 14-09-2016 IPR000014 PAS domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SMART SM00091 346 415 0.0032 T 14-09-2016 IPR000014 PAS domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SMART SM00091 219 286 1.3 T 14-09-2016 IPR000014 PAS domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SMART SM00091 86 153 0.0024 T 14-09-2016 IPR000014 PAS domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 PANTHER PTHR24423:SF379 56 222 1.3E-176 T 14-09-2016 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 PANTHER PTHR24423:SF379 344 866 1.3E-176 T 14-09-2016 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Pfam PF00989 PAS fold 89 163 5.3E-6 T 14-09-2016 IPR013767 PAS fold GO:0006355 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Gene3D G3DSA:3.30.450.20 343 464 6.3E-10 T 14-09-2016 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Pfam PF00072 Response regulator receiver domain 749 859 2.5E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SMART SM00388 479 545 0.0018 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SMART SM00387 587 710 5.9E-30 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SUPERFAMILY SSF55785 347 447 1.92E-7 T 14-09-2016 IPR000014 PAS domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 588 708 2.8E-19 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Pfam PF13426 PAS domain 356 463 0.006 T 14-09-2016 IPR000014 PAS domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 83 213 2.3E-7 T 14-09-2016 IPR000014 PAS domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SUPERFAMILY SSF52172 748 865 2.99E-30 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Gene3D G3DSA:1.10.287.130 473 541 9.7E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Gene3D G3DSA:3.30.565.10 549 708 6.1E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SUPERFAMILY SSF47384 469 542 6.08E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 688 7.3E-20 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 667 7.3E-20 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 653 7.3E-20 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 707 7.3E-20 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 SMART SM00448 747 860 3.9E-23 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Gene3D G3DSA:3.40.50.2300 746 865 5.0E-32 T 14-09-2016 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Gene3D G3DSA:3.30.450.20 225 328 1.6E-4 T 14-09-2016 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 Gene3D G3DSA:3.30.450.20 82 205 1.2E-11 T 14-09-2016 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 PANTHER PTHR24423 56 222 1.3E-176 T 14-09-2016 AMK01_RS11915 4a243a2a512b3004cec30d55062906fb 866 PANTHER PTHR24423 344 866 1.3E-176 T 14-09-2016 AMK01_RS02650 a842cd0cc6a2e7efc345c540fe306169 148 Pfam PF05025 RbsD / FucU transport protein family 4 140 2.7E-36 T 14-09-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 AMK01_RS02650 a842cd0cc6a2e7efc345c540fe306169 148 SUPERFAMILY SSF102546 1 140 3.14E-41 T 14-09-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 AMK01_RS02650 a842cd0cc6a2e7efc345c540fe306169 148 Gene3D G3DSA:3.40.1650.10 1 141 3.4E-50 T 14-09-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 AMK01_RS02650 a842cd0cc6a2e7efc345c540fe306169 148 PANTHER PTHR31690 1 146 5.9E-50 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PIRSF PIRSF037149 1 814 0.0 T 14-09-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 5 793 2.3E-268 T 14-09-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Gene3D G3DSA:3.90.480.10 567 646 2.4E-8 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 SUPERFAMILY SSF51905 3 189 3.81E-43 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 558 621 3.0E-13 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 420 468 2.1E-11 T 14-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 483 532 1.6E-12 T 14-09-2016 IPR007419 BFD-like [2Fe-2S]-binding domain AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 278 9.5E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PANTHER PTHR22912 1 412 3.6E-135 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 SUPERFAMILY SSF55124 519 640 2.78E-24 T 14-09-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Gene3D G3DSA:3.30.413.10 647 765 9.2E-31 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 4.6E-11 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 104 113 4.6E-11 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 4.6E-11 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 4.6E-11 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 3.6E-6 T 14-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 3.6E-6 T 14-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Gene3D G3DSA:3.50.50.60 2 106 1.5E-26 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 SUPERFAMILY SSF56014 633 803 4.32E-47 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 14-09-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 4.0E-15 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 4.0E-15 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 4.0E-15 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 4.0E-15 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 SUPERFAMILY SSF51905 146 303 8.91E-28 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 PANTHER PTHR22912:SF1 1 412 3.6E-135 T 14-09-2016 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 769 4.5E-26 T 14-09-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK01_RS09005 d89c4bd22e81032a5653307283dacc30 816 Gene3D G3DSA:3.50.50.60 107 302 1.6E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16830 9124a962960665430ff3b885aa3d4bae 135 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 36 127 9.5E-24 T 14-09-2016 IPR016772 Uncharacterised conserved protein UCP020408 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Gene3D G3DSA:3.30.1490.110 119 193 4.9E-15 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 PANTHER PTHR32432:SF4 13 406 7.4E-104 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 SUPERFAMILY SSF53067 224 406 1.23E-40 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 SMART SM00842 25 221 6.8E-77 T 14-09-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Hamap MF_02033 Cell division protein FtsA [ftsA]. 21 443 25.971 T 14-09-2016 IPR020823 Cell division protein FtsA GO:0007049 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Gene3D G3DSA:3.90.640.10 260 325 5.0E-20 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Gene3D G3DSA:3.30.420.40 326 380 5.8E-22 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Gene3D G3DSA:3.30.420.40 235 259 5.8E-22 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 PANTHER PTHR32432 13 406 7.4E-104 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Gene3D G3DSA:3.30.420.40 194 234 3.0E-16 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Gene3D G3DSA:3.30.420.40 20 116 3.0E-16 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 25 405 3.6E-104 T 14-09-2016 IPR020823 Cell division protein FtsA GO:0007049 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 SUPERFAMILY SSF53067 27 222 1.5E-45 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Pfam PF14450 Cell division protein FtsA 232 402 2.0E-23 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Pfam PF14450 Cell division protein FtsA 27 220 6.1E-9 T 14-09-2016 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 Pfam PF02491 SHS2 domain inserted in FTSA 118 187 1.3E-18 T 14-09-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AMK01_RS14585 2f396885631314720bd20db938886ad6 443 PIRSF PIRSF003101 17 443 1.1E-120 T 14-09-2016 IPR020823 Cell division protein FtsA GO:0007049 AMK01_RS16060 0f7b105c7ff19da80a754d5f63958de5 402 Gene3D G3DSA:1.20.1250.20 27 210 2.0E-25 T 14-09-2016 AMK01_RS16060 0f7b105c7ff19da80a754d5f63958de5 402 SUPERFAMILY SSF103473 16 400 2.09E-50 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS16060 0f7b105c7ff19da80a754d5f63958de5 402 Pfam PF07690 Major Facilitator Superfamily 41 351 4.6E-27 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS16060 0f7b105c7ff19da80a754d5f63958de5 402 PANTHER PTHR23501:SF28 24 375 1.6E-58 T 14-09-2016 AMK01_RS16060 0f7b105c7ff19da80a754d5f63958de5 402 Gene3D G3DSA:1.20.1250.20 229 399 8.1E-12 T 14-09-2016 AMK01_RS16060 0f7b105c7ff19da80a754d5f63958de5 402 PANTHER PTHR23501 24 375 1.6E-58 T 14-09-2016 AMK01_RS19560 584b496622666c7a060be023804fa86d 236 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 44 183 2.0E-4 T 14-09-2016 AMK01_RS19560 584b496622666c7a060be023804fa86d 236 PANTHER PTHR30336 27 207 2.6E-24 T 14-09-2016 AMK01_RS19560 584b496622666c7a060be023804fa86d 236 Pfam PF02698 DUF218 domain 69 208 2.5E-14 T 14-09-2016 IPR003848 Domain of unknown function DUF218 AMK01_RS19560 584b496622666c7a060be023804fa86d 236 PANTHER PTHR30336:SF1 27 207 2.6E-24 T 14-09-2016 AMK01_RS19560 584b496622666c7a060be023804fa86d 236 Gene3D G3DSA:3.40.50.620 65 180 2.1E-11 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS09915 36d8f8de8645a479846581ee697605c9 338 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 251 7.5E-28 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS09915 36d8f8de8645a479846581ee697605c9 338 PANTHER PTHR30085:SF5 1 307 2.4E-144 T 14-09-2016 AMK01_RS09915 36d8f8de8645a479846581ee697605c9 338 SUPERFAMILY SSF53850 24 253 6.69E-47 T 14-09-2016 AMK01_RS09915 36d8f8de8645a479846581ee697605c9 338 Gene3D G3DSA:3.40.190.10 124 220 5.2E-12 T 14-09-2016 AMK01_RS09915 36d8f8de8645a479846581ee697605c9 338 PANTHER PTHR30085 1 307 2.4E-144 T 14-09-2016 AMK01_RS09915 36d8f8de8645a479846581ee697605c9 338 SMART SM00062 33 262 7.4E-48 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS09915 36d8f8de8645a479846581ee697605c9 338 Gene3D G3DSA:3.40.190.10 222 251 1.1E-14 T 14-09-2016 AMK01_RS09915 36d8f8de8645a479846581ee697605c9 338 Gene3D G3DSA:3.40.190.10 31 123 1.1E-14 T 14-09-2016 AMK01_RS06945 1ec691610e152c26999f80b56eaa017a 350 PANTHER PTHR10366 6 310 1.2E-158 T 14-09-2016 AMK01_RS06945 1ec691610e152c26999f80b56eaa017a 350 Gene3D G3DSA:3.90.25.10 173 311 3.8E-58 T 14-09-2016 AMK01_RS06945 1ec691610e152c26999f80b56eaa017a 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 305 2.5E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06945 1ec691610e152c26999f80b56eaa017a 350 PANTHER PTHR10366:SF399 6 310 1.2E-158 T 14-09-2016 AMK01_RS06945 1ec691610e152c26999f80b56eaa017a 350 Gene3D G3DSA:3.40.50.720 4 172 4.4E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06945 1ec691610e152c26999f80b56eaa017a 350 SUPERFAMILY SSF51735 3 310 1.45E-89 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 Pfam PF05239 PRC-barrel domain 97 167 4.6E-13 T 14-09-2016 IPR027275 PRC-barrel domain AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 PANTHER PTHR33692 5 173 2.0E-39 T 14-09-2016 AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 Gene3D G3DSA:2.30.30.240 99 166 5.2E-18 T 14-09-2016 AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 Gene3D G3DSA:2.40.30.60 2 91 9.9E-24 T 14-09-2016 IPR002676 RimM protein GO:0006364 AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 Pfam PF01782 RimM N-terminal domain 10 87 1.5E-20 T 14-09-2016 IPR002676 RimM protein GO:0006364 AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 23.167 T 14-09-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 166 7.2E-43 T 14-09-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 SUPERFAMILY SSF50447 7 91 3.21E-19 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS20340 26c56d89540447be7fa3039890523d60 188 SUPERFAMILY SSF50346 99 166 2.88E-16 T 14-09-2016 IPR011033 PRC-barrel-like AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 SUPERFAMILY SSF54001 11 267 3.92E-56 T 14-09-2016 AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 34 57 2.6E-5 T 14-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 82 104 2.6E-5 T 14-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 58 81 2.6E-5 T 14-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 Gene3D G3DSA:3.30.2140.10 192 262 2.1E-41 T 14-09-2016 AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 Gene3D G3DSA:3.30.2140.10 12 98 2.1E-41 T 14-09-2016 AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 PANTHER PTHR11786 11 280 1.1E-36 T 14-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 Pfam PF00797 N-acetyltransferase 34 263 3.2E-38 T 14-09-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 AMK01_RS03135 f0d5b10fa353b817b5f43d1ad351d17b 281 PANTHER PTHR11786:SF0 11 280 1.1E-36 T 14-09-2016 AMK01_RS19350 4a4804093a601932e08711d197d23691 294 SUPERFAMILY SSF53335 53 216 3.56E-18 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS19350 4a4804093a601932e08711d197d23691 294 Pfam PF08241 Methyltransferase domain 83 137 1.2E-6 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK01_RS19350 4a4804093a601932e08711d197d23691 294 PANTHER PTHR13090 4 288 3.0E-88 T 14-09-2016 AMK01_RS19350 4a4804093a601932e08711d197d23691 294 Gene3D G3DSA:3.40.50.150 86 263 3.0E-20 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS20855 5a89344cd62e581e4bc02a1dfd75a5fb 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 14-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMK01_RS20855 5a89344cd62e581e4bc02a1dfd75a5fb 450 Gene3D G3DSA:1.20.1250.20 258 442 9.5E-15 T 14-09-2016 AMK01_RS20855 5a89344cd62e581e4bc02a1dfd75a5fb 450 Gene3D G3DSA:1.20.1250.20 29 211 8.1E-29 T 14-09-2016 AMK01_RS20855 5a89344cd62e581e4bc02a1dfd75a5fb 450 SUPERFAMILY SSF103473 16 443 7.98E-72 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS20855 5a89344cd62e581e4bc02a1dfd75a5fb 450 PANTHER PTHR24064 37 444 1.9E-77 T 14-09-2016 AMK01_RS20855 5a89344cd62e581e4bc02a1dfd75a5fb 450 Pfam PF00083 Sugar (and other) transporter 31 446 8.8E-60 T 14-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 Pfam PF00563 EAL domain 297 526 5.5E-71 T 14-09-2016 IPR001633 EAL domain AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 Pfam PF00990 Diguanylate cyclase, GGDEF domain 120 276 6.0E-45 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 Gene3D G3DSA:3.20.20.450 295 537 5.1E-91 T 14-09-2016 IPR001633 EAL domain AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 118 280 5.3E-38 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 Gene3D G3DSA:3.30.70.270 121 286 1.5E-53 T 14-09-2016 AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 PANTHER PTHR33121 243 548 9.5E-83 T 14-09-2016 AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 SMART SM00052 291 531 1.4E-112 T 14-09-2016 IPR001633 EAL domain AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 PANTHER PTHR33121:SF13 243 548 9.5E-83 T 14-09-2016 AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 SMART SM00267 109 281 4.1E-57 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 SUPERFAMILY SSF55073 125 283 5.26E-45 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS13580 8c335c586d869332a69dd6fde0a27b3a 548 SUPERFAMILY SSF141868 297 537 1.44E-85 T 14-09-2016 IPR001633 EAL domain AMK01_RS13400 8a9746c1df1063d15b48ebf2b7fb9cc6 234 Gene3D G3DSA:3.40.50.300 7 229 2.1E-62 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13400 8a9746c1df1063d15b48ebf2b7fb9cc6 234 PANTHER PTHR24220:SF452 10 230 6.1E-99 T 14-09-2016 AMK01_RS13400 8a9746c1df1063d15b48ebf2b7fb9cc6 234 Pfam PF00005 ABC transporter 30 176 1.6E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS13400 8a9746c1df1063d15b48ebf2b7fb9cc6 234 SMART SM00382 37 225 9.5E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS13400 8a9746c1df1063d15b48ebf2b7fb9cc6 234 PANTHER PTHR24220 10 230 6.1E-99 T 14-09-2016 AMK01_RS13400 8a9746c1df1063d15b48ebf2b7fb9cc6 234 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS13400 8a9746c1df1063d15b48ebf2b7fb9cc6 234 SUPERFAMILY SSF52540 9 230 5.32E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 372 3.8E-70 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 1.3E-19 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 PANTHER PTHR15184:SF3 1 493 0.0 T 14-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 14-09-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 51.188 T 14-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 SUPERFAMILY SSF52540 96 378 1.49E-97 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 PIRSF PIRSF039088 1 509 2.4E-279 T 14-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 508 1.5E-246 T 14-09-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 SUPERFAMILY SSF50615 10 94 5.49E-31 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 504 1.2E-48 T 14-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 Gene3D G3DSA:1.20.150.20 380 508 5.5E-57 T 14-09-2016 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 SUPERFAMILY SSF47917 380 508 6.8E-48 T 14-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 PANTHER PTHR15184 1 493 0.0 T 14-09-2016 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 Gene3D G3DSA:2.40.30.20 1 92 2.8E-42 T 14-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19910 23534cc85611f0a7bc803f4e6c1c72ad 509 Gene3D G3DSA:3.40.50.300 94 379 4.6E-119 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 SMART SM01230 103 379 4.7E-149 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 Gene3D G3DSA:3.30.590.10 107 455 1.9E-137 T 14-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 96 7.5E-30 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 PANTHER PTHR20852:SF15 2 139 7.2E-260 T 14-09-2016 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 PANTHER PTHR20852:SF15 161 469 7.2E-260 T 14-09-2016 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 14-09-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 4.0E-204 T 14-09-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 Gene3D G3DSA:3.10.20.70 4 106 1.1E-39 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 PANTHER PTHR20852 2 139 7.2E-260 T 14-09-2016 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 PANTHER PTHR20852 161 469 7.2E-260 T 14-09-2016 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 Pfam PF00120 Glutamine synthetase, catalytic domain 104 466 1.8E-141 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 SUPERFAMILY SSF55931 104 468 2.26E-137 T 14-09-2016 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-09-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS10785 d843151576a0b5b839111f8cd99eb048 469 SUPERFAMILY SSF54368 3 101 4.05E-36 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS17405 120634e0880febdb33e2cb2a22127067 586 PANTHER PTHR32309 175 578 1.1E-40 T 14-09-2016 AMK01_RS17405 120634e0880febdb33e2cb2a22127067 586 Pfam PF06564 Cellulose biosynthesis protein BcsQ 411 547 8.6E-7 T 14-09-2016 IPR017746 Cellulose synthase operon protein BcsQ AMK01_RS17405 120634e0880febdb33e2cb2a22127067 586 Pfam PF02706 Chain length determinant protein 28 210 3.8E-12 T 14-09-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMK01_RS17405 120634e0880febdb33e2cb2a22127067 586 Gene3D G3DSA:3.40.50.300 410 580 4.6E-24 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17405 120634e0880febdb33e2cb2a22127067 586 Pfam PF13807 G-rich domain on putative tyrosine kinase 264 338 6.0E-7 T 14-09-2016 IPR032807 Tyrosine kinase, G-rich domain AMK01_RS17405 120634e0880febdb33e2cb2a22127067 586 SUPERFAMILY SSF52540 410 581 2.62E-22 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01980 875b7dc83179bfd2d3bb31a68972f0d8 214 PANTHER PTHR11067:SF9 2 209 2.1E-61 T 14-09-2016 AMK01_RS01980 875b7dc83179bfd2d3bb31a68972f0d8 214 Gene3D G3DSA:3.90.950.10 2 211 1.1E-70 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK01_RS01980 875b7dc83179bfd2d3bb31a68972f0d8 214 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 8 210 5.2E-45 T 14-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK01_RS01980 875b7dc83179bfd2d3bb31a68972f0d8 214 SUPERFAMILY SSF52972 4 212 5.76E-60 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK01_RS01980 875b7dc83179bfd2d3bb31a68972f0d8 214 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 7 213 42.987 T 14-09-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK01_RS01980 875b7dc83179bfd2d3bb31a68972f0d8 214 PANTHER PTHR11067 2 209 2.1E-61 T 14-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK01_RS01980 875b7dc83179bfd2d3bb31a68972f0d8 214 Pfam PF01725 Ham1 family 9 209 6.2E-47 T 14-09-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 SUPERFAMILY SSF51064 138 193 4.45E-20 T 14-09-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 Gene3D G3DSA:2.30.22.10 136 193 8.7E-28 T 14-09-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 PANTHER PTHR21237 44 195 6.4E-68 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 SUPERFAMILY SSF58014 40 136 5.62E-26 T 14-09-2016 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 ProSitePatterns PS01071 grpE protein signature. 147 190 - T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 Hamap MF_01151 Protein GrpE [grpE]. 2 192 19.967 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 Gene3D G3DSA:3.90.20.20 32 135 2.2E-31 T 14-09-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 Pfam PF01025 GrpE 32 192 4.1E-54 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 PRINTS PR00773 GrpE protein signature 84 99 4.1E-27 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 PRINTS PR00773 GrpE protein signature 56 72 4.1E-27 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 PRINTS PR00773 GrpE protein signature 144 159 4.1E-27 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK01_RS02000 d4ceb6f1967cc4dc8a6b081f7db33d1a 211 PRINTS PR00773 GrpE protein signature 171 190 4.1E-27 T 14-09-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK01_RS15405 3dcb737cedcf52a6f861205ee5bdd952 383 Pfam PF00557 Metallopeptidase family M24 161 363 3.4E-26 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS15405 3dcb737cedcf52a6f861205ee5bdd952 383 Gene3D G3DSA:3.40.350.10 1 150 1.2E-36 T 14-09-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMK01_RS15405 3dcb737cedcf52a6f861205ee5bdd952 383 PANTHER PTHR10804:SF109 138 315 3.5E-14 T 14-09-2016 AMK01_RS15405 3dcb737cedcf52a6f861205ee5bdd952 383 SUPERFAMILY SSF53092 1 150 9.24E-33 T 14-09-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal AMK01_RS15405 3dcb737cedcf52a6f861205ee5bdd952 383 Pfam PF01321 Creatinase/Prolidase N-terminal domain 13 152 2.2E-21 T 14-09-2016 IPR000587 Creatinase, N-terminal GO:0016787 AMK01_RS15405 3dcb737cedcf52a6f861205ee5bdd952 383 PANTHER PTHR10804 138 315 3.5E-14 T 14-09-2016 AMK01_RS15405 3dcb737cedcf52a6f861205ee5bdd952 383 Gene3D G3DSA:3.90.230.10 151 377 3.3E-38 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS15405 3dcb737cedcf52a6f861205ee5bdd952 383 SUPERFAMILY SSF55920 151 380 7.98E-49 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS16665 eb75c67f194d9ed9f6a169a7d620a4c9 235 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 165 228 1.9E-4 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS16665 eb75c67f194d9ed9f6a169a7d620a4c9 235 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 51 126 1.4E-6 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS16035 2d97ede402004c87567129fecadace78 315 SMART SM01130 5 304 5.9E-62 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS16035 2d97ede402004c87567129fecadace78 315 PIRSF PIRSF001365 1 314 1.1E-66 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS16035 2d97ede402004c87567129fecadace78 315 SUPERFAMILY SSF51569 2 304 2.41E-63 T 14-09-2016 AMK01_RS16035 2d97ede402004c87567129fecadace78 315 PANTHER PTHR12128 1 305 1.8E-77 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS16035 2d97ede402004c87567129fecadace78 315 Gene3D G3DSA:3.20.20.70 6 304 5.3E-73 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS16035 2d97ede402004c87567129fecadace78 315 Pfam PF00701 Dihydrodipicolinate synthetase family 6 298 8.6E-38 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS16035 2d97ede402004c87567129fecadace78 315 PANTHER PTHR12128:SF15 1 305 1.8E-77 T 14-09-2016 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PANTHER PTHR35333:SF2 22 301 6.5E-85 T 14-09-2016 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 Pfam PF13354 Beta-lactamase enzyme family 67 274 1.5E-42 T 14-09-2016 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 ProSitePatterns PS00146 Beta-lactamase class-A active site. 78 93 - T 14-09-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 Gene3D G3DSA:3.40.710.10 42 299 3.3E-100 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 SUPERFAMILY SSF56601 42 298 1.36E-71 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PRINTS PR00118 Beta-lactamase class A signature 217 232 5.8E-53 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PRINTS PR00118 Beta-lactamase class A signature 234 249 5.8E-53 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PRINTS PR00118 Beta-lactamase class A signature 45 69 5.8E-53 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PRINTS PR00118 Beta-lactamase class A signature 76 93 5.8E-53 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PRINTS PR00118 Beta-lactamase class A signature 155 179 5.8E-53 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PRINTS PR00118 Beta-lactamase class A signature 119 144 5.8E-53 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PRINTS PR00118 Beta-lactamase class A signature 181 206 5.8E-53 T 14-09-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMK01_RS06270 22cb6496190a4bbd99e3921b1894a809 301 PANTHER PTHR35333 22 301 6.5E-85 T 14-09-2016 AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 PANTHER PTHR10217 224 348 9.8E-25 T 14-09-2016 AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 SMART SM00100 234 346 2.5E-19 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 296 313 - T 14-09-2016 IPR018488 Cyclic nucleotide-binding, conserved site AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 PANTHER PTHR10217:SF509 224 348 9.8E-25 T 14-09-2016 AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 Pfam PF07885 Ion channel 140 211 1.0E-11 T 14-09-2016 IPR013099 Potassium channel domain AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 SUPERFAMILY SSF51206 224 348 3.01E-30 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 Pfam PF00027 Cyclic nucleotide-binding domain 253 328 1.4E-17 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 SUPERFAMILY SSF81324 15 214 2.58E-25 T 14-09-2016 AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 261 277 - T 14-09-2016 IPR018488 Cyclic nucleotide-binding, conserved site AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 Gene3D G3DSA:2.60.120.10 224 348 1.3E-33 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 Gene3D G3DSA:1.20.120.540 1 124 8.1E-67 T 14-09-2016 IPR027378 Cyclic nucleotide-regulated ion channel, N-terminal domain AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 Gene3D G3DSA:1.20.5.110 179 220 3.8E-12 T 14-09-2016 AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 Gene3D G3DSA:1.10.287.70 125 177 2.2E-14 T 14-09-2016 AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 PRINTS PR00169 Potassium channel signature 187 213 1.8E-11 T 14-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 PRINTS PR00169 Potassium channel signature 98 124 1.8E-11 T 14-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 AMK01_RS16410 774128264e17b27dc2430ca764b4f615 355 PRINTS PR00169 Potassium channel signature 158 180 1.8E-11 T 14-09-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 Gene3D G3DSA:3.40.50.300 141 310 4.4E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 SUPERFAMILY SSF52172 4 186 1.85E-40 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-09-2016 IPR025944 Sigma-54 interaction domain, conserved site AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 Pfam PF02954 Bacterial regulatory protein, Fis family 412 450 2.6E-11 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 SUPERFAMILY SSF46689 352 454 2.73E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 454 3.4E-5 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 435 3.4E-5 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 PANTHER PTHR32071:SF17 1 454 6.9E-209 T 14-09-2016 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 SMART SM00448 3 116 4.1E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 Pfam PF00072 Response regulator receiver domain 5 114 6.2E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 Gene3D G3DSA:1.10.8.60 312 388 1.3E-23 T 14-09-2016 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 SUPERFAMILY SSF52540 141 373 1.63E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 Gene3D G3DSA:1.10.10.60 405 453 4.0E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 SMART SM00382 162 302 2.6E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 Gene3D G3DSA:3.40.50.2300 4 128 1.6E-35 T 14-09-2016 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 PANTHER PTHR32071 1 454 6.9E-209 T 14-09-2016 AMK01_RS10005 ca6b25652bfe4c51a179c4a202225791 454 Pfam PF00158 Sigma-54 interaction domain 142 305 4.4E-50 T 14-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.5E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.5E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 PANTHER PTHR30328 7 179 1.8E-25 T 14-09-2016 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 Gene3D G3DSA:1.10.10.60 2 59 9.0E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 9.7E-12 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 PANTHER PTHR30328:SF18 7 179 1.8E-25 T 14-09-2016 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 SUPERFAMILY SSF46689 2 84 1.03E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 Gene3D G3DSA:1.10.357.10 60 185 9.1E-34 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS02785 ef8ef757ce73fc2c564fc559d2064228 195 SUPERFAMILY SSF48498 81 184 4.3E-23 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 Gene3D G3DSA:3.40.50.300 53 159 4.4E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 Gene3D G3DSA:3.40.50.300 242 340 4.4E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 Gene3D G3DSA:1.10.486.10 445 589 6.1E-49 T 14-09-2016 AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 Pfam PF13361 UvrD-like helicase C-terminal domain 332 661 1.9E-61 T 14-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 Gene3D G3DSA:1.10.10.160 163 241 2.5E-20 T 14-09-2016 IPR013986 DExx box DNA helicase domain AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 PANTHER PTHR11070 51 697 3.6E-208 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 SUPERFAMILY SSF52540 52 691 8.64E-173 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 Gene3D G3DSA:3.40.50.300 341 444 3.9E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 Gene3D G3DSA:3.40.50.300 599 692 3.9E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 Pfam PF00580 UvrD/REP helicase N-terminal domain 58 327 1.4E-70 T 14-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK01_RS14470 564829f4aedb05cc68899e5f378f0a0b 825 PANTHER PTHR11070:SF7 51 697 3.6E-208 T 14-09-2016 AMK01_RS11240 98be5b6731aa43d636a3a4e78579d7b9 381 PIRSF PIRSF035865 2 381 1.2E-122 T 14-09-2016 IPR014598 Uncharacterised conserved protein UCP035865 AMK01_RS11240 98be5b6731aa43d636a3a4e78579d7b9 381 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 91 372 2.4E-69 T 14-09-2016 IPR019285 Protein of unknown function DUF2336 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SUPERFAMILY SSF50249 94 181 1.86E-12 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PANTHER PTHR10724:SF6 8 524 2.1E-218 T 14-09-2016 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SUPERFAMILY SSF50249 195 283 5.08E-27 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 45 59 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 296 315 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 336 354 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 27 45 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 114 130 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 90 109 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 161 181 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 218 239 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PRINTS PR00681 Ribosomal protein S1 signature 132 149 4.3E-83 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SUPERFAMILY SSF50249 12 118 5.74E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SUPERFAMILY SSF50249 457 543 1.5E-14 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Gene3D G3DSA:2.40.50.140 107 178 7.7E-12 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Gene3D G3DSA:2.40.50.140 362 442 1.0E-22 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Gene3D G3DSA:2.40.50.140 454 531 8.9E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SUPERFAMILY SSF50249 348 444 4.92E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PANTHER PTHR10724 8 524 2.1E-218 T 14-09-2016 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Gene3D G3DSA:2.40.50.140 283 361 1.1E-28 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SUPERFAMILY SSF50249 261 361 5.15E-27 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SMART SM00316 368 440 2.4E-20 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SMART SM00316 457 530 2.1E-13 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SMART SM00316 196 266 5.0E-28 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SMART SM00316 281 353 3.4E-26 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SMART SM00316 25 93 2.8E-9 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 SMART SM00316 109 177 1.2E-7 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Gene3D G3DSA:2.40.50.140 198 282 3.2E-31 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Gene3D G3DSA:2.40.50.140 29 106 9.2E-12 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 PIRSF PIRSF002111 2 544 2.9E-192 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Pfam PF00575 S1 RNA binding domain 457 530 3.6E-12 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Pfam PF00575 S1 RNA binding domain 107 177 4.1E-14 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Pfam PF00575 S1 RNA binding domain 25 92 7.2E-11 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Pfam PF00575 S1 RNA binding domain 367 440 9.1E-19 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Pfam PF00575 S1 RNA binding domain 195 266 1.2E-20 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 Pfam PF00575 S1 RNA binding domain 280 353 1.1E-20 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS00500 30666768c3cee9d8364696e090bea081 567 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 9 530 5.1E-189 T 14-09-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS07430 e27931f455f1ded55626a61d8847337a 314 SUPERFAMILY SSF109998 30 197 1.18E-26 T 14-09-2016 IPR027304 Trigger factor/SurA domain AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 PANTHER PTHR30177 248 315 3.3E-13 T 14-09-2016 AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 Gene3D G3DSA:3.40.190.10 23 111 3.7E-13 T 14-09-2016 AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 Gene3D G3DSA:3.40.190.10 255 322 3.7E-13 T 14-09-2016 AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 SUPERFAMILY SSF53850 23 327 7.06E-63 T 14-09-2016 AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 310 8.2E-50 T 14-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 PANTHER PTHR30177:SF14 248 315 3.3E-13 T 14-09-2016 AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 Gene3D G3DSA:3.40.190.100 113 239 4.9E-26 T 14-09-2016 AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 PANTHER PTHR30177:SF14 28 226 3.3E-13 T 14-09-2016 AMK01_RS12765 ad4287bf5e5c2615c27dda710ae0ceb3 332 PANTHER PTHR30177 28 226 3.3E-13 T 14-09-2016 AMK01_RS15795 73cb52e174f2dbeb6c65f721bf5fefe9 295 SUPERFAMILY SSF53613 6 285 3.43E-64 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS15795 73cb52e174f2dbeb6c65f721bf5fefe9 295 Gene3D G3DSA:3.40.1190.20 13 284 2.2E-61 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS15795 73cb52e174f2dbeb6c65f721bf5fefe9 295 PANTHER PTHR10584 1 285 1.4E-83 T 14-09-2016 AMK01_RS15795 73cb52e174f2dbeb6c65f721bf5fefe9 295 Pfam PF00294 pfkB family carbohydrate kinase 13 284 2.0E-48 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AMK01_RS15795 73cb52e174f2dbeb6c65f721bf5fefe9 295 PANTHER PTHR10584:SF57 1 285 1.4E-83 T 14-09-2016 AMK01_RS15795 73cb52e174f2dbeb6c65f721bf5fefe9 295 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 241 254 - T 14-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK01_RS04155 f57daa4f3d05104e9a0f461724c583d6 230 Gene3D G3DSA:2.40.440.10 64 205 4.6E-34 T 14-09-2016 AMK01_RS04155 f57daa4f3d05104e9a0f461724c583d6 230 PANTHER PTHR30582 52 220 8.5E-58 T 14-09-2016 AMK01_RS04155 f57daa4f3d05104e9a0f461724c583d6 230 Pfam PF03734 L,D-transpeptidase catalytic domain 69 204 6.2E-16 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS04155 f57daa4f3d05104e9a0f461724c583d6 230 PANTHER PTHR30582:SF1 52 220 8.5E-58 T 14-09-2016 AMK01_RS04155 f57daa4f3d05104e9a0f461724c583d6 230 SUPERFAMILY SSF141523 143 205 1.44E-32 T 14-09-2016 AMK01_RS04155 f57daa4f3d05104e9a0f461724c583d6 230 SUPERFAMILY SSF141523 67 115 1.44E-32 T 14-09-2016 AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 PANTHER PTHR30332:SF6 77 496 5.2E-62 T 14-09-2016 AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 Pfam PF00263 Bacterial type II and III secretion system protein 291 445 9.1E-36 T 14-09-2016 IPR004846 Type II/III secretion system GO:0009306 AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 PRINTS PR00811 Bacterial general secretion pathway protein D signature 409 427 4.0E-8 T 14-09-2016 IPR001775 GspD/PilQ family AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 PRINTS PR00811 Bacterial general secretion pathway protein D signature 432 446 4.0E-8 T 14-09-2016 IPR001775 GspD/PilQ family AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 PRINTS PR00811 Bacterial general secretion pathway protein D signature 221 231 4.0E-8 T 14-09-2016 IPR001775 GspD/PilQ family AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 PRINTS PR00811 Bacterial general secretion pathway protein D signature 287 311 4.0E-8 T 14-09-2016 IPR001775 GspD/PilQ family AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 PANTHER PTHR30332 77 496 5.2E-62 T 14-09-2016 AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 Pfam PF04972 BON domain 129 181 3.7E-8 T 14-09-2016 IPR007055 BON domain AMK01_RS01180 0ce356301a21c5610439c4ee502b590e 498 Pfam PF13629 Pilus formation protein N terminal region 56 125 4.9E-20 T 14-09-2016 IPR032789 Pilus formation protein, N-terminal AMK01_RS06740 162fefd8b2a3d00fc5e4ea9b203dc2f2 497 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 55 216 1.8E-18 T 14-09-2016 AMK01_RS12005 fcd6519000eb4e27df51362e08149e46 203 SUPERFAMILY SSF159594 37 201 3.4E-40 T 14-09-2016 AMK01_RS12005 fcd6519000eb4e27df51362e08149e46 203 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 39 196 4.1E-27 T 14-09-2016 IPR005586 ABC-type transport auxiliary lipoprotein component AMK01_RS12005 fcd6519000eb4e27df51362e08149e46 203 Gene3D G3DSA:3.40.50.10610 27 202 3.9E-55 T 14-09-2016 IPR005586 ABC-type transport auxiliary lipoprotein component AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 20 421 8.8E-93 T 14-09-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 PIRSF PIRSF000484 10 419 6.1E-66 T 14-09-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 Gene3D G3DSA:3.20.140.10 2 409 1.2E-148 T 14-09-2016 AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 17 427 41.908 T 14-09-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 PANTHER PTHR11098:SF16 1 425 4.2E-171 T 14-09-2016 AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 SUPERFAMILY SSF51690 139 423 7.85E-88 T 14-09-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 PANTHER PTHR11098 1 425 4.2E-171 T 14-09-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 190 423 3.8E-71 T 14-09-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK01_RS01060 50d72ea4d3f45139a4cb34331b35888f 434 SUPERFAMILY SSF54675 2 157 2.91E-46 T 14-09-2016 AMK01_RS00830 306b1598ad113cd776c42e67930764c1 315 Pfam PF03547 Membrane transport protein 4 153 3.1E-17 T 14-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK01_RS00830 306b1598ad113cd776c42e67930764c1 315 Pfam PF03547 Membrane transport protein 157 309 6.4E-16 T 14-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK01_RS00830 306b1598ad113cd776c42e67930764c1 315 PANTHER PTHR36838:SF1 1 313 2.2E-33 T 14-09-2016 AMK01_RS00830 306b1598ad113cd776c42e67930764c1 315 PANTHER PTHR36838 1 313 2.2E-33 T 14-09-2016 AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 PANTHER PTHR10381 4 197 4.4E-126 T 14-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 SUPERFAMILY SSF52096 15 199 1.12E-71 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 Gene3D G3DSA:3.90.226.10 7 195 7.7E-83 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 PANTHER PTHR10381:SF11 4 197 4.4E-126 T 14-09-2016 AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 116 129 - T 14-09-2016 IPR033135 ClpP, histidine active site AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 Pfam PF00574 Clp protease 16 195 3.9E-81 T 14-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 1.1E-47 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 1.1E-47 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 1.1E-47 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 1.1E-47 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 1.1E-47 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS07220 5573f6d06039f03327c510c77d385324 203 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 7 197 41.033 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS05335 88d7270e403e489e729b69a6588bb198 114 PANTHER PTHR33154:SF12 1 110 5.4E-21 T 14-09-2016 AMK01_RS05335 88d7270e403e489e729b69a6588bb198 114 Pfam PF12840 Helix-turn-helix domain 15 77 1.6E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05335 88d7270e403e489e729b69a6588bb198 114 SMART SM00418 16 98 2.1E-8 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS05335 88d7270e403e489e729b69a6588bb198 114 Gene3D G3DSA:1.10.10.10 14 96 1.2E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05335 88d7270e403e489e729b69a6588bb198 114 PANTHER PTHR33154 1 110 5.4E-21 T 14-09-2016 AMK01_RS05335 88d7270e403e489e729b69a6588bb198 114 SUPERFAMILY SSF46785 3 96 8.59E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 14-09-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 Gene3D G3DSA:3.40.50.1240 2 207 6.3E-76 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 183 2.4E-40 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 PANTHER PTHR11931 4 195 5.7E-109 T 14-09-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 SUPERFAMILY SSF53254 1 208 2.24E-64 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 123 2.9E-48 T 14-09-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 SMART SM00855 4 165 2.0E-22 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 204 37.139 T 14-09-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMK01_RS01000 acb1621563dd93e97783a9b2031e03c2 211 PIRSF PIRSF000709 2 204 5.4E-8 T 14-09-2016 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 7 405 52.163 T 14-09-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 9 400 6.1E-142 T 14-09-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 Gene3D G3DSA:3.90.1260.10 165 362 2.9E-87 T 14-09-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 Gene3D G3DSA:3.40.50.620 8 164 1.4E-68 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 PANTHER PTHR11587 6 398 4.0E-223 T 14-09-2016 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 SUPERFAMILY SSF52402 8 171 4.19E-51 T 14-09-2016 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 Pfam PF00764 Arginosuccinate synthase 11 399 9.8E-154 T 14-09-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 Gene3D G3DSA:1.20.5.470 376 400 2.2E-7 T 14-09-2016 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 SUPERFAMILY SSF69864 178 404 3.53E-88 T 14-09-2016 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 PANTHER PTHR11587:SF2 6 398 4.0E-223 T 14-09-2016 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 13 21 - T 14-09-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS20165 831e963a2634f501dddf0899d44c1764 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 14-09-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 Pfam PF00483 Nucleotidyl transferase 16 283 1.0E-62 T 14-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 PANTHER PTHR22572:SF10 14 391 6.4E-157 T 14-09-2016 AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 SUPERFAMILY SSF53448 354 370 1.03E-73 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 SUPERFAMILY SSF53448 15 287 1.03E-73 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 19 38 - T 14-09-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 SUPERFAMILY SSF51161 302 399 6.79E-15 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 PANTHER PTHR22572 14 391 6.4E-157 T 14-09-2016 AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 204 214 - T 14-09-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 14 390 1.1E-153 T 14-09-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 106 114 - T 14-09-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 Gene3D G3DSA:3.90.550.10 15 294 1.2E-71 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 Gene3D G3DSA:3.90.550.10 337 380 1.2E-71 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS18545 2e98736c65cb66aeacf62b8283b8e3e9 420 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 10 416 51.435 T 14-09-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 Gene3D G3DSA:3.20.20.450 519 771 6.1E-81 T 14-09-2016 IPR001633 EAL domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 Pfam PF13426 PAS domain 241 336 3.8E-6 T 14-09-2016 IPR000014 PAS domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 SUPERFAMILY SSF55073 353 507 1.96E-42 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 Gene3D G3DSA:3.30.70.270 350 513 1.5E-49 T 14-09-2016 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 PANTHER PTHR10799:SF774 624 643 7.1E-59 T 14-09-2016 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 Gene3D G3DSA:3.30.450.20 220 336 3.1E-11 T 14-09-2016 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 SMART SM00052 516 767 2.7E-89 T 14-09-2016 IPR001633 EAL domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 346 505 2.3E-38 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 SUPERFAMILY SSF141868 523 773 4.71E-74 T 14-09-2016 IPR001633 EAL domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 Pfam PF00563 EAL domain 524 762 1.2E-63 T 14-09-2016 IPR001633 EAL domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 SMART SM00267 337 506 3.5E-52 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 PANTHER PTHR10799 228 596 7.1E-59 T 14-09-2016 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 PANTHER PTHR10799 624 643 7.1E-59 T 14-09-2016 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 PANTHER PTHR10799:SF774 228 596 7.1E-59 T 14-09-2016 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 501 5.8E-41 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 SMART SM00304 169 221 1.7E-4 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 SUPERFAMILY SSF55785 215 335 1.11E-10 T 14-09-2016 IPR000014 PAS domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 SMART SM00091 228 294 0.0013 T 14-09-2016 IPR000014 PAS domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 232 342 1.5E-10 T 14-09-2016 IPR000014 PAS domain AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 SUPERFAMILY SSF158472 170 217 4.58E-7 T 14-09-2016 AMK01_RS15430 4d12fcf46754c9010c197ece0df83040 783 Pfam PF00672 HAMP domain 148 217 2.3E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 405 597 2.1E-52 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 PANTHER PTHR32089 162 252 5.3E-100 T 14-09-2016 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 PANTHER PTHR32089 333 601 5.3E-100 T 14-09-2016 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 SUPERFAMILY SSF58104 318 599 5.49E-65 T 14-09-2016 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 SMART SM00304 298 350 0.0021 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 SMART SM00304 217 270 0.28 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 SUPERFAMILY SSF158472 218 262 2.35E-5 T 14-09-2016 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 Pfam PF00672 HAMP domain 199 258 1.5E-7 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 Gene3D G3DSA:1.10.287.950 365 570 2.3E-52 T 14-09-2016 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 PANTHER PTHR32089:SF63 162 252 5.3E-100 T 14-09-2016 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 PANTHER PTHR32089:SF63 333 601 5.3E-100 T 14-09-2016 AMK01_RS14530 0caf9442ee5b42d773e124ac3987f236 654 SMART SM00283 351 598 3.3E-94 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 35.385 T 14-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 PANTHER PTHR11229 1 213 1.5E-108 T 14-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 Gene3D G3DSA:4.10.960.10 78 158 1.2E-29 T 14-09-2016 AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-09-2016 IPR019926 Ribosomal protein L3, conserved site AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 SUPERFAMILY SSF50447 1 211 3.88E-79 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 Pfam PF00297 Ribosomal protein L3 89 181 3.3E-14 T 14-09-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 Gene3D G3DSA:2.40.30.10 159 211 2.9E-9 T 14-09-2016 AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 Gene3D G3DSA:2.40.30.10 4 33 2.9E-9 T 14-09-2016 AMK01_RS08450 6ef3377f608d6edf30025a7cc0b2fa2a 213 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 9.6E-83 T 14-09-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS19810 658d08a35ca4f1de7ac969606c3144ee 158 Gene3D G3DSA:2.40.50.180 54 89 2.1E-9 T 14-09-2016 AMK01_RS19810 658d08a35ca4f1de7ac969606c3144ee 158 SUPERFAMILY SSF50341 9 151 2.62E-35 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS19810 658d08a35ca4f1de7ac969606c3144ee 158 SMART SM00260 11 148 7.5E-29 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS19810 658d08a35ca4f1de7ac969606c3144ee 158 Gene3D G3DSA:2.30.30.40 90 141 4.2E-9 T 14-09-2016 AMK01_RS19810 658d08a35ca4f1de7ac969606c3144ee 158 Pfam PF01584 CheW-like domain 16 150 1.9E-31 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS19810 658d08a35ca4f1de7ac969606c3144ee 158 PANTHER PTHR22617 9 156 5.1E-38 T 14-09-2016 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 Hamap MF_01518 Adenine deaminase [ade]. 32 588 31.243 T 14-09-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 SUPERFAMILY SSF51556 86 336 2.54E-19 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 Gene3D G3DSA:2.30.40.10 282 373 4.7E-11 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 PANTHER PTHR11113 18 369 8.4E-115 T 14-09-2016 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 PANTHER PTHR11113 410 554 8.4E-115 T 14-09-2016 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 SUPERFAMILY SSF51338 22 86 5.15E-17 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 SUPERFAMILY SSF51338 336 371 5.15E-17 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 PANTHER PTHR11113:SF2 18 369 8.4E-115 T 14-09-2016 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 PANTHER PTHR11113:SF2 410 554 8.4E-115 T 14-09-2016 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 Pfam PF01979 Amidohydrolase family 82 366 9.7E-21 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 Gene3D G3DSA:2.30.40.10 31 126 6.4E-20 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS17660 27ba6f0c564449c9b05a232088d9f5ce 595 Pfam PF13382 Adenine deaminase C-terminal domain 418 583 8.3E-40 T 14-09-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AMK01_RS16480 01926f05fb71e17126b9acefd9292023 330 PANTHER PTHR30036 1 330 4.0E-31 T 14-09-2016 AMK01_RS16480 01926f05fb71e17126b9acefd9292023 330 Gene3D G3DSA:3.40.50.2300 149 316 3.9E-38 T 14-09-2016 AMK01_RS16480 01926f05fb71e17126b9acefd9292023 330 Pfam PF13407 Periplasmic binding protein domain 28 307 5.6E-46 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS16480 01926f05fb71e17126b9acefd9292023 330 Gene3D G3DSA:3.40.50.2300 24 148 1.4E-20 T 14-09-2016 AMK01_RS16480 01926f05fb71e17126b9acefd9292023 330 SUPERFAMILY SSF53822 25 327 5.34E-42 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS05480 ae1bf29e5748c23a27b4a46200b1dc2c 109 Gene3D G3DSA:1.10.10.10 5 106 1.1E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05480 ae1bf29e5748c23a27b4a46200b1dc2c 109 PANTHER PTHR33154 7 100 1.6E-22 T 14-09-2016 AMK01_RS05480 ae1bf29e5748c23a27b4a46200b1dc2c 109 Pfam PF12840 Helix-turn-helix domain 9 68 6.5E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05480 ae1bf29e5748c23a27b4a46200b1dc2c 109 SUPERFAMILY SSF46785 7 100 9.87E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05480 ae1bf29e5748c23a27b4a46200b1dc2c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 9.3E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS05480 ae1bf29e5748c23a27b4a46200b1dc2c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 9.3E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS05480 ae1bf29e5748c23a27b4a46200b1dc2c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 9.3E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS05480 ae1bf29e5748c23a27b4a46200b1dc2c 109 SMART SM00418 9 88 9.8E-19 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 Pfam PF00664 ABC transporter transmembrane region 32 302 2.4E-21 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 SUPERFAMILY SSF90123 21 324 5.36E-47 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 SMART SM00382 375 561 1.7E-20 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 Gene3D G3DSA:3.40.50.300 349 579 5.6E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 Gene3D G3DSA:1.20.1560.10 28 323 1.6E-37 T 14-09-2016 AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 Pfam PF00005 ABC transporter 367 515 8.8E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 PANTHER PTHR24221 24 589 7.0E-184 T 14-09-2016 AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10380 f8bf7f6c06b10cf85ba82702b9284d8e 596 SUPERFAMILY SSF52540 340 586 4.05E-88 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 PANTHER PTHR11587:SF2 2 322 7.4E-175 T 14-09-2016 AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 42 53 - T 14-09-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 SUPERFAMILY SSF52402 3 96 7.73E-22 T 14-09-2016 AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 Gene3D G3DSA:3.90.1260.10 102 325 1.8E-92 T 14-09-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 Gene3D G3DSA:3.40.50.620 3 96 2.1E-32 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 Pfam PF00764 Arginosuccinate synthase 2 321 1.1E-122 T 14-09-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 PANTHER PTHR11587 2 322 7.4E-175 T 14-09-2016 AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 SUPERFAMILY SSF69864 101 324 7.06E-88 T 14-09-2016 AMK01_RS13300 651fcdf4ff25b0b0fc673de9e6c2c38a 327 TIGRFAM TIGR00032 argG: argininosuccinate synthase 2 322 2.7E-113 T 14-09-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS14445 b7afe118db78bb4e6f272403b153b8c0 304 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 9 159 4.7E-12 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS14445 b7afe118db78bb4e6f272403b153b8c0 304 PANTHER PTHR11920 1 159 3.7E-17 T 14-09-2016 AMK01_RS14445 b7afe118db78bb4e6f272403b153b8c0 304 PANTHER PTHR11920:SF341 1 159 3.7E-17 T 14-09-2016 AMK01_RS14445 b7afe118db78bb4e6f272403b153b8c0 304 SUPERFAMILY SSF55073 4 174 5.18E-47 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS14445 b7afe118db78bb4e6f272403b153b8c0 304 Gene3D G3DSA:3.30.70.1230 5 176 7.5E-32 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18515 db8b7cf6020504f6b20105b3b5799dd1 1107 PANTHER PTHR33490 1 511 4.2E-242 T 14-09-2016 AMK01_RS18515 db8b7cf6020504f6b20105b3b5799dd1 1107 PANTHER PTHR33490:SF1 1 511 4.2E-242 T 14-09-2016 AMK01_RS18515 db8b7cf6020504f6b20105b3b5799dd1 1107 Pfam PF01841 Transglutaminase-like superfamily 142 247 1.0E-18 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS18515 db8b7cf6020504f6b20105b3b5799dd1 1107 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 279 1102 0.0 T 14-09-2016 IPR018667 Domain of unknown function DUF2126 AMK01_RS18515 db8b7cf6020504f6b20105b3b5799dd1 1107 Gene3D G3DSA:3.90.260.10 178 251 6.1E-10 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS18515 db8b7cf6020504f6b20105b3b5799dd1 1107 SMART SM00460 173 249 5.0E-18 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS18515 db8b7cf6020504f6b20105b3b5799dd1 1107 SUPERFAMILY SSF54001 9 339 1.04E-69 T 14-09-2016 AMK01_RS18515 db8b7cf6020504f6b20105b3b5799dd1 1107 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 83 2.7E-26 T 14-09-2016 IPR013589 Bacterial transglutaminase-like, N-terminal AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 Gene3D G3DSA:3.40.50.720 163 281 3.4E-29 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 SUPERFAMILY SSF51735 137 304 3.69E-30 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 PANTHER PTHR11695 12 337 1.7E-88 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 Gene3D G3DSA:3.90.180.10 1 162 1.2E-45 T 14-09-2016 IPR011032 GroES-like AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 SMART SM00829 10 335 0.0011 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 Pfam PF00107 Zinc-binding dehydrogenase 170 297 2.2E-18 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 1.6E-29 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 SUPERFAMILY SSF50129 1 169 3.3E-43 T 14-09-2016 IPR011032 GroES-like AMK01_RS02630 113106b41103e743e25e8aa672771fb1 339 PANTHER PTHR11695:SF38 12 337 1.7E-88 T 14-09-2016 AMK01_RS15145 ae8cf4a932ed24f7808d8f56bb905089 467 Pfam PF01554 MatE 257 422 3.4E-25 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS15145 ae8cf4a932ed24f7808d8f56bb905089 467 Pfam PF01554 MatE 31 189 1.9E-26 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS15145 ae8cf4a932ed24f7808d8f56bb905089 467 PIRSF PIRSF006603 22 464 3.9E-60 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS15145 ae8cf4a932ed24f7808d8f56bb905089 467 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 436 4.9E-70 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS15145 ae8cf4a932ed24f7808d8f56bb905089 467 PANTHER PTHR11206 20 455 6.3E-80 T 14-09-2016 AMK01_RS15145 ae8cf4a932ed24f7808d8f56bb905089 467 PANTHER PTHR11206:SF153 20 455 6.3E-80 T 14-09-2016 AMK01_RS24375 2c28d3740c2f08d111fc8dcee2dec241 161 SUPERFAMILY SSF103473 3 160 1.44E-10 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS24375 2c28d3740c2f08d111fc8dcee2dec241 161 PANTHER PTHR23523 4 161 4.0E-52 T 14-09-2016 AMK01_RS24375 2c28d3740c2f08d111fc8dcee2dec241 161 Gene3D G3DSA:1.20.1250.20 3 111 4.5E-4 T 14-09-2016 AMK01_RS24375 2c28d3740c2f08d111fc8dcee2dec241 161 PANTHER PTHR23523:SF2 4 161 4.0E-52 T 14-09-2016 AMK01_RS14340 42b8c77d8185aeb0f7868b8136eaa8c5 296 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 76 285 1.5E-65 T 14-09-2016 AMK01_RS14340 42b8c77d8185aeb0f7868b8136eaa8c5 296 SUPERFAMILY SSF56784 78 285 3.34E-46 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS14340 42b8c77d8185aeb0f7868b8136eaa8c5 296 Gene3D G3DSA:1.10.150.210 92 142 3.2E-26 T 14-09-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 AMK01_RS14340 42b8c77d8185aeb0f7868b8136eaa8c5 296 PANTHER PTHR10000 78 285 2.4E-71 T 14-09-2016 AMK01_RS14340 42b8c77d8185aeb0f7868b8136eaa8c5 296 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 82 254 2.2E-34 T 14-09-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AMK01_RS14340 42b8c77d8185aeb0f7868b8136eaa8c5 296 Gene3D G3DSA:3.40.50.1000 143 283 3.1E-38 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS14340 42b8c77d8185aeb0f7868b8136eaa8c5 296 PANTHER PTHR10000:SF7 78 285 2.4E-71 T 14-09-2016 AMK01_RS14340 42b8c77d8185aeb0f7868b8136eaa8c5 296 Pfam PF12710 haloacid dehalogenase-like hydrolase 85 252 2.7E-18 T 14-09-2016 AMK01_RS15470 dc45e62f823f66c8846d8f76b1203f5f 155 Pfam PF01575 MaoC like domain 10 113 4.1E-10 T 14-09-2016 IPR002539 MaoC-like domain AMK01_RS15470 dc45e62f823f66c8846d8f76b1203f5f 155 PANTHER PTHR13078 8 152 6.8E-20 T 14-09-2016 AMK01_RS15470 dc45e62f823f66c8846d8f76b1203f5f 155 SUPERFAMILY SSF54637 6 152 4.28E-28 T 14-09-2016 IPR029069 HotDog domain AMK01_RS15470 dc45e62f823f66c8846d8f76b1203f5f 155 Gene3D G3DSA:3.10.129.10 6 152 8.7E-36 T 14-09-2016 IPR029069 HotDog domain AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 Gene3D G3DSA:3.30.420.10 6 159 1.3E-56 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 7 154 9.0E-45 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 SUPERFAMILY SSF53098 6 159 1.8E-49 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 5 157 44.817 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 PANTHER PTHR30194 1 167 2.9E-55 T 14-09-2016 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 7 157 4.4E-41 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 65 81 2.3E-30 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 142 154 2.3E-30 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 111 130 2.3E-30 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 8 21 2.3E-30 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 87 103 2.3E-30 T 14-09-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK01_RS17945 072d454a47b2dbe827dd2ce0f8514c5a 169 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 117 151 - T 14-09-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 Pfam PF12833 Helix-turn-helix domain 184 259 6.9E-20 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 Gene3D G3DSA:1.10.10.60 216 259 2.0E-9 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 SUPERFAMILY SSF51215 9 149 9.42E-22 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 SMART SM00342 178 260 4.5E-25 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 Pfam PF02311 AraC-like ligand binding domain 17 144 4.0E-23 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 PANTHER PTHR11019:SF75 6 259 1.6E-52 T 14-09-2016 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 SUPERFAMILY SSF46689 215 260 3.32E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 SUPERFAMILY SSF46689 164 212 2.3E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 Gene3D G3DSA:2.60.120.280 14 150 2.4E-16 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 Gene3D G3DSA:1.10.10.60 160 215 2.3E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS15070 f0d36af8153ed5c6eea536134025212f 265 PANTHER PTHR11019 6 259 1.6E-52 T 14-09-2016 AMK01_RS14645 1aee4acdb64019387f906c2a602afa72 585 Pfam PF03717 Penicillin-binding Protein dimerisation domain 88 197 1.3E-14 T 14-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK01_RS14645 1aee4acdb64019387f906c2a602afa72 585 SUPERFAMILY SSF56519 86 213 8.63E-33 T 14-09-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK01_RS14645 1aee4acdb64019387f906c2a602afa72 585 Gene3D G3DSA:3.40.710.10 235 566 4.4E-77 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS14645 1aee4acdb64019387f906c2a602afa72 585 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 559 7.9E-56 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK01_RS14645 1aee4acdb64019387f906c2a602afa72 585 SUPERFAMILY SSF56601 235 570 2.29E-78 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS14645 1aee4acdb64019387f906c2a602afa72 585 PANTHER PTHR30627 32 572 1.3E-124 T 14-09-2016 AMK01_RS14645 1aee4acdb64019387f906c2a602afa72 585 PANTHER PTHR30627:SF1 32 572 1.3E-124 T 14-09-2016 AMK01_RS14645 1aee4acdb64019387f906c2a602afa72 585 Gene3D G3DSA:3.90.1310.10 156 212 2.3E-12 T 14-09-2016 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 SMART SM00245 172 364 1.8E-82 T 14-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 Gene3D G3DSA:3.90.226.10 181 366 1.6E-67 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 Gene3D G3DSA:3.90.226.10 402 425 1.6E-67 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 PANTHER PTHR32060 52 375 7.1E-113 T 14-09-2016 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 SMART SM00228 99 170 1.2E-14 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 SUPERFAMILY SSF50156 90 181 1.92E-19 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 Pfam PF13180 PDZ domain 99 178 2.5E-11 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 Pfam PF03572 Peptidase family S41 196 363 1.1E-56 T 14-09-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 52 370 1.8E-100 T 14-09-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 SUPERFAMILY SSF52096 190 368 1.42E-81 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 SUPERFAMILY SSF52096 35 117 1.42E-81 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 Gene3D G3DSA:2.30.42.10 105 180 9.2E-28 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS20950 1f4e184059846872dd1115dbca54cfa6 440 Gene3D G3DSA:3.30.750.44 48 104 1.2E-9 T 14-09-2016 AMK01_RS09240 1bc0c38a2a1eb2af3718fe1e33b55e3d 344 Pfam PF00296 Luciferase-like monooxygenase 18 297 6.2E-49 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS09240 1bc0c38a2a1eb2af3718fe1e33b55e3d 344 SUPERFAMILY SSF51679 21 341 1.3E-73 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS09240 1bc0c38a2a1eb2af3718fe1e33b55e3d 344 PANTHER PTHR30137:SF8 1 341 1.2E-109 T 14-09-2016 AMK01_RS09240 1bc0c38a2a1eb2af3718fe1e33b55e3d 344 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 340 1.7E-149 T 14-09-2016 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative AMK01_RS09240 1bc0c38a2a1eb2af3718fe1e33b55e3d 344 PANTHER PTHR30137 1 341 1.2E-109 T 14-09-2016 AMK01_RS09240 1bc0c38a2a1eb2af3718fe1e33b55e3d 344 Gene3D G3DSA:3.20.20.30 15 342 1.6E-84 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 SUPERFAMILY SSF51366 4 257 1.98E-88 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 15 269 35.116 T 14-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 259 5.8E-75 T 14-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 Pfam PF00290 Tryptophan synthase alpha chain 9 257 9.2E-89 T 14-09-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 49 62 - T 14-09-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 PANTHER PTHR10314 75 155 5.0E-21 T 14-09-2016 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 PANTHER PTHR10314 1 52 5.0E-21 T 14-09-2016 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 Gene3D G3DSA:3.20.20.70 4 270 4.1E-96 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 PANTHER PTHR10314:SF4 75 155 5.0E-21 T 14-09-2016 AMK01_RS00115 6f6392921510e77e6fe4ab4ea3ac3c1b 279 PANTHER PTHR10314:SF4 1 52 5.0E-21 T 14-09-2016 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 Gene3D G3DSA:3.30.470.20 181 352 1.6E-65 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 PANTHER PTHR11609 5 352 7.9E-132 T 14-09-2016 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 PANTHER PTHR11609:SF5 5 352 7.9E-132 T 14-09-2016 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 SUPERFAMILY SSF56059 101 299 5.48E-61 T 14-09-2016 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 SUPERFAMILY SSF52440 5 97 3.17E-28 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS18230 707713062614bc748f183f285ba815c8 358 Gene3D G3DSA:3.40.50.20 5 109 4.2E-37 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS18230 707713062614bc748f183f285ba815c8 358 Pfam PF02222 ATP-grasp domain 112 280 7.3E-54 T 14-09-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 Gene3D G3DSA:3.30.1490.20 116 180 1.3E-18 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 5 353 1.3E-118 T 14-09-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 5 354 42.289 T 14-09-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMK01_RS18230 707713062614bc748f183f285ba815c8 358 SUPERFAMILY SSF51246 304 354 1.18E-14 T 14-09-2016 IPR011054 Rudiment single hybrid motif AMK01_RS01600 c83c5c0cb9a253f8360f17334338f4ce 157 PANTHER PTHR30411 5 151 5.8E-53 T 14-09-2016 AMK01_RS01600 c83c5c0cb9a253f8360f17334338f4ce 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 154 1.6E-53 T 14-09-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMK01_RS01600 c83c5c0cb9a253f8360f17334338f4ce 157 PIRSF PIRSF006181 1 157 1.9E-50 T 14-09-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMK01_RS01600 c83c5c0cb9a253f8360f17334338f4ce 157 Gene3D G3DSA:3.90.960.10 3 155 5.4E-53 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK01_RS01600 c83c5c0cb9a253f8360f17334338f4ce 157 PANTHER PTHR30411:SF0 5 151 5.8E-53 T 14-09-2016 AMK01_RS01600 c83c5c0cb9a253f8360f17334338f4ce 157 SUPERFAMILY SSF55826 5 155 1.57E-43 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK01_RS01600 c83c5c0cb9a253f8360f17334338f4ce 157 Pfam PF04073 Aminoacyl-tRNA editing domain 35 145 1.3E-24 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK01_RS13715 658edebb10ad82f11c42f637d3fd660c 209 Pfam PF13360 PQQ-like domain 73 170 4.3E-7 T 14-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK01_RS13715 658edebb10ad82f11c42f637d3fd660c 209 SUPERFAMILY SSF50969 15 207 2.9E-27 T 14-09-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMK01_RS13715 658edebb10ad82f11c42f637d3fd660c 209 Gene3D G3DSA:2.130.10.10 16 205 1.8E-20 T 14-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 248 270 4.1E-9 T 14-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 SUPERFAMILY SSF52540 12 270 6.2E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 SMART SM00382 38 248 1.5E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 Gene3D G3DSA:3.40.50.300 9 270 8.6E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 PANTHER PTHR24220:SF358 15 128 2.3E-111 T 14-09-2016 AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 PANTHER PTHR24220:SF358 145 284 2.3E-111 T 14-09-2016 AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 Pfam PF00005 ABC transporter 30 198 9.0E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 PANTHER PTHR24220 15 128 2.3E-111 T 14-09-2016 AMK01_RS17085 8e28a2a784a0a98657d3b9d2287cdbda 291 PANTHER PTHR24220 145 284 2.3E-111 T 14-09-2016 AMK01_RS11760 7367e8673bec9b4cfbb1fb899b8e9d3e 273 PANTHER PTHR12110:SF26 7 247 4.8E-42 T 14-09-2016 AMK01_RS11760 7367e8673bec9b4cfbb1fb899b8e9d3e 273 SUPERFAMILY SSF51658 12 270 6.22E-51 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS11760 7367e8673bec9b4cfbb1fb899b8e9d3e 273 PANTHER PTHR12110 7 247 4.8E-42 T 14-09-2016 AMK01_RS11760 7367e8673bec9b4cfbb1fb899b8e9d3e 273 Pfam PF01261 Xylose isomerase-like TIM barrel 29 226 2.3E-11 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS11760 7367e8673bec9b4cfbb1fb899b8e9d3e 273 Gene3D G3DSA:3.20.20.150 21 269 3.4E-30 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS21045 0f7ed9b5f16a007c7307bda1c7a2615b 230 SMART SM00382 30 217 3.1E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS21045 0f7ed9b5f16a007c7307bda1c7a2615b 230 SUPERFAMILY SSF52540 4 220 6.96E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21045 0f7ed9b5f16a007c7307bda1c7a2615b 230 Gene3D G3DSA:3.40.50.300 3 221 2.4E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21045 0f7ed9b5f16a007c7307bda1c7a2615b 230 PANTHER PTHR24220 5 225 8.3E-66 T 14-09-2016 AMK01_RS21045 0f7ed9b5f16a007c7307bda1c7a2615b 230 Pfam PF00005 ABC transporter 26 169 2.9E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS21045 0f7ed9b5f16a007c7307bda1c7a2615b 230 PANTHER PTHR24220:SF111 5 225 8.3E-66 T 14-09-2016 AMK01_RS00430 f590df37a91d45ddb22d34b2f523f393 319 SUPERFAMILY SSF161098 79 305 1.09E-52 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00430 f590df37a91d45ddb22d34b2f523f393 319 PANTHER PTHR30193 12 318 5.0E-123 T 14-09-2016 AMK01_RS00430 f590df37a91d45ddb22d34b2f523f393 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 307 4.5E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00430 f590df37a91d45ddb22d34b2f523f393 319 Gene3D G3DSA:1.10.3720.10 86 310 2.9E-56 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00430 f590df37a91d45ddb22d34b2f523f393 319 PANTHER PTHR30193:SF1 12 318 5.0E-123 T 14-09-2016 AMK01_RS09375 524470953a05cec3fb0bd19e5cafd26e 95 PANTHER PTHR15004 1 95 7.4E-26 T 14-09-2016 AMK01_RS09375 524470953a05cec3fb0bd19e5cafd26e 95 PANTHER PTHR15004:SF0 1 95 7.4E-26 T 14-09-2016 AMK01_RS09375 524470953a05cec3fb0bd19e5cafd26e 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 1.3E-30 T 14-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMK01_RS09375 524470953a05cec3fb0bd19e5cafd26e 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 22.693 T 14-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMK01_RS09375 524470953a05cec3fb0bd19e5cafd26e 95 SUPERFAMILY SSF141000 3 93 2.75E-28 T 14-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMK01_RS09375 524470953a05cec3fb0bd19e5cafd26e 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 8.8E-19 T 14-09-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMK01_RS14195 a4b692f40567306fb2663f611c6bc1b8 404 PANTHER PTHR23501:SF56 5 399 3.8E-136 T 14-09-2016 AMK01_RS14195 a4b692f40567306fb2663f611c6bc1b8 404 Gene3D G3DSA:1.20.1250.20 19 196 4.9E-18 T 14-09-2016 AMK01_RS14195 a4b692f40567306fb2663f611c6bc1b8 404 SUPERFAMILY SSF103473 9 400 8.63E-48 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS14195 a4b692f40567306fb2663f611c6bc1b8 404 PANTHER PTHR23501 5 399 3.8E-136 T 14-09-2016 AMK01_RS14195 a4b692f40567306fb2663f611c6bc1b8 404 Gene3D G3DSA:1.20.1250.20 227 397 2.4E-15 T 14-09-2016 AMK01_RS14195 a4b692f40567306fb2663f611c6bc1b8 404 Pfam PF07690 Major Facilitator Superfamily 38 335 4.0E-26 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 PIRSF PIRSF006641 1 367 1.3E-155 T 14-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 PANTHER PTHR23305:SF12 1 367 7.9E-201 T 14-09-2016 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 Gene3D G3DSA:3.40.50.300 203 271 1.4E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 Gene3D G3DSA:3.40.50.300 4 131 1.4E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 9.7E-152 T 14-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.5E-35 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.5E-35 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.5E-35 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.5E-35 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 Pfam PF01926 50S ribosome-binding GTPase 5 118 5.3E-24 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 43.046 T 14-09-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 1.9E-40 T 14-09-2016 IPR013029 Domain of unknown function DUF933 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 Gene3D G3DSA:1.10.150.300 132 202 3.9E-24 T 14-09-2016 IPR023192 TGS-like domain AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 SUPERFAMILY SSF81271 283 364 6.32E-36 T 14-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 Gene3D G3DSA:3.10.20.30 272 366 5.3E-50 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 SUPERFAMILY SSF52540 3 305 1.73E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15455 f98f1a80b68589370fa42cfe44e3afbe 367 PANTHER PTHR23305 1 367 7.9E-201 T 14-09-2016 AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 SUPERFAMILY SSF52518 370 546 1.46E-43 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 SUPERFAMILY SSF52467 161 356 1.25E-34 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 334 5.2E-27 T 14-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 178 2.1E-49 T 14-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 Gene3D G3DSA:3.40.50.970 351 547 6.2E-50 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 406 543 3.0E-32 T 14-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 Gene3D G3DSA:3.40.50.1220 192 350 2.4E-36 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 Gene3D G3DSA:3.40.50.970 1 185 4.0E-52 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 PANTHER PTHR18968 1 544 2.5E-116 T 14-09-2016 AMK01_RS01340 737ef659cb555d063e93c04fb479f1e1 593 SUPERFAMILY SSF52518 1 183 6.73E-44 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS02360 61e4c19e6d308c6d420cf5139852bac7 217 Pfam PF01926 50S ribosome-binding GTPase 32 159 1.4E-20 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS02360 61e4c19e6d308c6d420cf5139852bac7 217 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 15 207 3.7E-60 T 14-09-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AMK01_RS02360 61e4c19e6d308c6d420cf5139852bac7 217 Gene3D G3DSA:3.40.50.300 27 210 2.2E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02360 61e4c19e6d308c6d420cf5139852bac7 217 SUPERFAMILY SSF52540 22 209 1.2E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02360 61e4c19e6d308c6d420cf5139852bac7 217 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 21 211 26.532 T 14-09-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AMK01_RS02360 61e4c19e6d308c6d420cf5139852bac7 217 PANTHER PTHR11649 11 216 3.9E-54 T 14-09-2016 AMK01_RS10660 a4e0c90252e4ee504cb808eedeacb510 270 PANTHER PTHR19370:SF98 19 254 9.4E-97 T 14-09-2016 AMK01_RS10660 a4e0c90252e4ee504cb808eedeacb510 270 Pfam PF00970 Oxidoreductase FAD-binding domain 32 112 1.3E-7 T 14-09-2016 IPR008333 Oxidoreductase, FAD-binding domain AMK01_RS10660 a4e0c90252e4ee504cb808eedeacb510 270 PANTHER PTHR19370 19 254 9.4E-97 T 14-09-2016 AMK01_RS10660 a4e0c90252e4ee504cb808eedeacb510 270 Gene3D G3DSA:3.40.50.80 112 269 3.9E-38 T 14-09-2016 AMK01_RS10660 a4e0c90252e4ee504cb808eedeacb510 270 SUPERFAMILY SSF52343 117 268 7.73E-32 T 14-09-2016 AMK01_RS10660 a4e0c90252e4ee504cb808eedeacb510 270 Gene3D G3DSA:2.40.30.10 19 111 3.2E-30 T 14-09-2016 AMK01_RS10660 a4e0c90252e4ee504cb808eedeacb510 270 SUPERFAMILY SSF63380 18 113 1.74E-24 T 14-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 Pfam PF00072 Response regulator receiver domain 1045 1155 1.3E-9 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 SMART SM00387 910 1020 3.0E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 Gene3D G3DSA:3.40.50.2300 1041 1163 8.8E-17 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 SUPERFAMILY SSF55785 635 754 3.35E-9 T 14-09-2016 IPR000014 PAS domain AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 Gene3D G3DSA:3.30.450.20 635 756 1.3E-12 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 SUPERFAMILY SSF47384 785 866 3.73E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 SMART SM00448 1043 1155 6.1E-10 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 SUPERFAMILY SSF52172 1041 1163 2.56E-19 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PANTHER PTHR24423 643 771 3.9E-157 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PANTHER PTHR24423 13 64 3.9E-157 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PANTHER PTHR24423 797 1167 3.9E-157 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PANTHER PTHR24423 186 205 3.9E-157 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 Gene3D G3DSA:3.30.565.10 869 1024 1.8E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 Pfam PF00512 His Kinase A (phospho-acceptor) domain 802 866 1.4E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 Pfam PF12860 PAS fold 651 760 3.1E-31 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 SUPERFAMILY SSF55874 857 1018 1.57E-38 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PANTHER PTHR24423:SF439 643 771 3.9E-157 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PANTHER PTHR24423:SF439 797 1167 3.9E-157 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PANTHER PTHR24423:SF439 13 64 3.9E-157 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PANTHER PTHR24423:SF439 186 205 3.9E-157 T 14-09-2016 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 SMART SM00388 801 866 1.1E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1004 1017 2.7E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 946 960 2.7E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 964 974 2.7E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 PRINTS PR00344 Bacterial sensor protein C-terminal signature 980 998 2.7E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 911 1019 5.2E-20 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03000 376c559e0dad1597d2fda80ab51840b8 1167 Gene3D G3DSA:1.10.287.130 797 862 5.4E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 SUPERFAMILY SSF55874 295 467 2.49E-35 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 SUPERFAMILY SSF47384 224 307 1.22E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 467 2.2E-19 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 Gene3D G3DSA:3.30.565.10 309 468 6.2E-36 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 306 2.1E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 Pfam PF00672 HAMP domain 168 236 3.4E-12 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 PANTHER PTHR24423 181 466 6.0E-61 T 14-09-2016 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 PANTHER PTHR24423 1 14 6.0E-61 T 14-09-2016 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 SMART SM00387 351 469 1.7E-28 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 SMART SM00304 187 240 2.3E-10 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 SMART SM00388 241 306 2.6E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 Gene3D G3DSA:1.10.287.130 231 302 5.4E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 3.2E-8 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 3.2E-8 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06615 2b68aef874368c89a85cd67c79971730 470 SUPERFAMILY SSF158472 189 237 8.37E-8 T 14-09-2016 AMK01_RS11965 4dfdcccbf7bb0669cdb9c77066aa45a2 289 SUPERFAMILY SSF51717 13 278 1.16E-88 T 14-09-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AMK01_RS11965 4dfdcccbf7bb0669cdb9c77066aa45a2 289 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 276 1.5E-91 T 14-09-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK01_RS11965 4dfdcccbf7bb0669cdb9c77066aa45a2 289 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 59 72 - T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AMK01_RS11965 4dfdcccbf7bb0669cdb9c77066aa45a2 289 PANTHER PTHR20941:SF1 15 281 6.4E-106 T 14-09-2016 AMK01_RS11965 4dfdcccbf7bb0669cdb9c77066aa45a2 289 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AMK01_RS11965 4dfdcccbf7bb0669cdb9c77066aa45a2 289 Pfam PF00809 Pterin binding enzyme 26 261 1.7E-75 T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AMK01_RS11965 4dfdcccbf7bb0669cdb9c77066aa45a2 289 PANTHER PTHR20941 15 281 6.4E-106 T 14-09-2016 AMK01_RS11965 4dfdcccbf7bb0669cdb9c77066aa45a2 289 Gene3D G3DSA:3.20.20.20 14 278 5.4E-98 T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 117 140 - T 14-09-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 456 32.21 T 14-09-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 453 8.1E-105 T 14-09-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 SUPERFAMILY SSF53244 316 456 2.79E-36 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 PANTHER PTHR23135:SF2 1 470 1.0E-133 T 14-09-2016 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 SUPERFAMILY SSF51984 6 97 4.71E-12 T 14-09-2016 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 Gene3D G3DSA:3.40.1190.10 98 316 5.1E-61 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 SUPERFAMILY SSF53623 110 314 2.49E-52 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 PANTHER PTHR23135 1 470 1.0E-133 T 14-09-2016 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 Pfam PF08245 Mur ligase middle domain 119 297 7.8E-33 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 Gene3D G3DSA:3.40.50.720 7 96 9.6E-13 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14625 556bdaf1f12a21a6aa2083c3e8f98a4d 470 Gene3D G3DSA:3.90.190.20 318 452 2.0E-40 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS08095 68cbfdecbdb7b056c8f4077716691839 194 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 154 170 - T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK01_RS08095 68cbfdecbdb7b056c8f4077716691839 194 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 47 188 9.6E-73 T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK01_RS08095 68cbfdecbdb7b056c8f4077716691839 194 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 36 187 39.36 T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK01_RS08095 68cbfdecbdb7b056c8f4077716691839 194 SUPERFAMILY SSF56770 45 189 5.63E-65 T 14-09-2016 AMK01_RS08095 68cbfdecbdb7b056c8f4077716691839 194 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 73 180 2.0E-23 T 14-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMK01_RS08095 68cbfdecbdb7b056c8f4077716691839 194 Gene3D G3DSA:3.40.50.700 58 185 3.0E-32 T 14-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMK01_RS08095 68cbfdecbdb7b056c8f4077716691839 194 PANTHER PTHR11995:SF22 6 194 1.9E-131 T 14-09-2016 AMK01_RS08095 68cbfdecbdb7b056c8f4077716691839 194 PANTHER PTHR11995 6 194 1.9E-131 T 14-09-2016 AMK01_RS21075 3e61e09e15fc4b6953b83cb9405a884f 539 SUPERFAMILY SSF55073 356 513 1.18E-45 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS21075 3e61e09e15fc4b6953b83cb9405a884f 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 348 513 3.8E-48 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS21075 3e61e09e15fc4b6953b83cb9405a884f 539 SMART SM00267 340 515 5.6E-54 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS21075 3e61e09e15fc4b6953b83cb9405a884f 539 PANTHER PTHR10799 382 510 7.7E-25 T 14-09-2016 AMK01_RS21075 3e61e09e15fc4b6953b83cb9405a884f 539 Gene3D G3DSA:3.30.70.270 353 513 5.1E-50 T 14-09-2016 AMK01_RS21075 3e61e09e15fc4b6953b83cb9405a884f 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 510 1.8E-42 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS10395 e78ee26de7db95be72db1dec7de0257c 275 Pfam PF14026 Protein of unknown function (DUF4242) 4 78 1.1E-21 T 14-09-2016 IPR025336 Protein of unknown function DUF4242 AMK01_RS10395 e78ee26de7db95be72db1dec7de0257c 275 Gene3D G3DSA:3.30.70.1230 107 269 5.6E-30 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS10395 e78ee26de7db95be72db1dec7de0257c 275 SMART SM00044 11 251 1.6E-5 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS10395 e78ee26de7db95be72db1dec7de0257c 275 SUPERFAMILY SSF55073 98 270 5.97E-43 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS10395 e78ee26de7db95be72db1dec7de0257c 275 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 110 240 8.4E-17 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 236 256 8.5E-46 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 258 278 8.5E-46 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 205 230 8.5E-46 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 16 32 8.5E-46 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 45 71 8.5E-46 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 282 308 8.5E-46 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 126 149 8.5E-46 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 Pfam PF01706 FliG C-terminal domain 228 335 1.4E-24 T 14-09-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 Gene3D G3DSA:1.10.220.30 85 201 4.5E-21 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 Gene3D G3DSA:1.10.220.30 206 341 8.1E-29 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PANTHER PTHR30534:SF0 3 344 3.8E-46 T 14-09-2016 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 SUPERFAMILY SSF48029 19 107 5.75E-12 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 Gene3D G3DSA:1.10.220.30 19 77 4.2E-7 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 Pfam PF14842 FliG N-terminal domain 16 109 1.8E-15 T 14-09-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 Pfam PF14841 FliG middle domain 127 200 7.5E-21 T 14-09-2016 IPR032779 Flagellar motor switch protein FliG, middle domain AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 PANTHER PTHR30534 3 344 3.8E-46 T 14-09-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AMK01_RS03450 71bd7b0b949a16d14a18e61701a4b506 346 SUPERFAMILY SSF48029 127 335 1.15E-46 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK01_RS02300 42dbfd36d61f77516e7220b8c13b5971 288 SUPERFAMILY SSF102405 49 280 2.9E-52 T 14-09-2016 AMK01_RS02300 42dbfd36d61f77516e7220b8c13b5971 288 PANTHER PTHR31223:SF1 108 285 3.0E-62 T 14-09-2016 AMK01_RS02300 42dbfd36d61f77516e7220b8c13b5971 288 PANTHER PTHR31223 108 285 3.0E-62 T 14-09-2016 AMK01_RS02300 42dbfd36d61f77516e7220b8c13b5971 288 Pfam PF03641 Possible lysine decarboxylase 150 279 1.3E-32 T 14-09-2016 IPR031100 LOG family AMK01_RS02300 42dbfd36d61f77516e7220b8c13b5971 288 Gene3D G3DSA:3.40.50.450 61 287 1.4E-63 T 14-09-2016 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 PANTHER PTHR23083 160 263 1.2E-47 T 14-09-2016 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 PANTHER PTHR23083 57 91 1.2E-47 T 14-09-2016 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 PANTHER PTHR23083 291 571 1.2E-47 T 14-09-2016 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 Gene3D G3DSA:1.25.40.10 78 110 1.4E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SUPERFAMILY SSF48452 313 570 2.31E-29 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 Gene3D G3DSA:1.25.40.10 312 571 1.0E-54 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SMART SM00028 325 358 350.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SMART SM00028 535 568 190.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SMART SM00028 53 86 13.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SMART SM00028 501 534 19.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SMART SM00028 359 392 29.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SMART SM00028 466 500 78.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SMART SM00028 432 465 7.8E-7 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 Pfam PF14559 Tetratricopeptide repeat 68 105 1.2E-6 T 14-09-2016 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 Pfam PF00515 Tetratricopeptide repeat 434 464 5.5E-8 T 14-09-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 Gene3D G3DSA:1.25.40.10 191 250 1.5E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 Gene3D G3DSA:1.25.40.10 63 77 1.5E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 Pfam PF13432 Tetratricopeptide repeat 507 563 2.9E-5 T 14-09-2016 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 Pfam PF13432 Tetratricopeptide repeat 363 421 8.1E-6 T 14-09-2016 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SUPERFAMILY SSF48452 59 87 1.41E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SUPERFAMILY SSF48452 144 251 1.41E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SUPERFAMILY SSF48452 297 350 2.98E-13 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS04455 3b5e9a7ae828c8bd116fd2e819093fd9 610 SUPERFAMILY SSF48452 58 110 2.98E-13 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 195 3.1E-38 T 14-09-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.7E-13 T 14-09-2016 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 Gene3D G3DSA:1.10.150.20 68 138 2.9E-26 T 14-09-2016 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 Pfam PF01330 RuvA N terminal domain 1 62 4.2E-18 T 14-09-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 SUPERFAMILY SSF46929 157 203 1.57E-9 T 14-09-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 28.9 T 14-09-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 PANTHER PTHR33796 2 204 5.4E-66 T 14-09-2016 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 Gene3D G3DSA:1.10.8.10 156 203 1.7E-11 T 14-09-2016 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 Gene3D G3DSA:2.40.50.140 1 65 6.0E-23 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 SUPERFAMILY SSF50249 1 63 1.2E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 SUPERFAMILY SSF47781 65 134 5.19E-20 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK01_RS17960 cddc59d1be01b728a51ebcfda25dad57 204 Pfam PF07499 RuvA, C-terminal domain 156 202 5.4E-12 T 14-09-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 Gene3D G3DSA:3.30.499.10 23 252 1.4E-82 T 14-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 Gene3D G3DSA:3.30.499.10 373 577 4.6E-61 T 14-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PANTHER PTHR11670:SF1 9 397 0.0 T 14-09-2016 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PANTHER PTHR11670:SF1 755 896 0.0 T 14-09-2016 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 Pfam PF00330 Aconitase family (aconitate hydratase) 77 564 1.1E-184 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 ProSitePatterns PS00450 Aconitase family signature 1. 429 445 - T 14-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 Pfam PF00694 Aconitase C-terminal domain 695 823 1.2E-41 T 14-09-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 SUPERFAMILY SSF53732 5 629 5.49E-225 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 173 181 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 149 162 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 376 390 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 433 444 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 495 508 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 206 219 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 220 235 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 282 295 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PRINTS PR00415 Aconitase family signature 296 309 1.2E-39 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 ProSitePatterns PS01244 Aconitase family signature 2. 495 508 - T 14-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PANTHER PTHR11670:SF1 418 653 0.0 T 14-09-2016 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PANTHER PTHR11670:SF1 669 714 0.0 T 14-09-2016 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 894 0.0 T 14-09-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PANTHER PTHR11670 418 653 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PANTHER PTHR11670 669 714 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 Gene3D G3DSA:3.40.1060.10 253 371 7.0E-35 T 14-09-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 SUPERFAMILY SSF52016 632 893 1.28E-81 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PANTHER PTHR11670 9 397 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 PANTHER PTHR11670 755 896 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20265 2e07d0db4fc203d220c60ad7acae89c1 896 Gene3D G3DSA:3.20.19.10 639 894 2.9E-77 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK01_RS06155 f65d927edb3747725628f221eee938f2 396 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 221 352 2.5E-15 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS06155 f65d927edb3747725628f221eee938f2 396 SUPERFAMILY SSF55073 218 395 8.63E-41 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS06155 f65d927edb3747725628f221eee938f2 396 Gene3D G3DSA:3.30.70.1230 221 394 5.5E-27 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS06155 f65d927edb3747725628f221eee938f2 396 SMART SM00044 186 379 8.4E-5 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS06155 f65d927edb3747725628f221eee938f2 396 PANTHER PTHR11920 163 394 1.5E-42 T 14-09-2016 AMK01_RS06155 f65d927edb3747725628f221eee938f2 396 SUPERFAMILY SSF55781 77 176 7.36E-6 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS06155 f65d927edb3747725628f221eee938f2 396 Gene3D G3DSA:3.30.450.40 89 173 9.0E-5 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS06155 f65d927edb3747725628f221eee938f2 396 PANTHER PTHR11920:SF348 163 394 1.5E-42 T 14-09-2016 AMK01_RS19955 b85ce50a9b15defdf7ae52f4a820a5fc 166 PANTHER PTHR30529 1 163 1.8E-22 T 14-09-2016 AMK01_RS19955 b85ce50a9b15defdf7ae52f4a820a5fc 166 SUPERFAMILY SSF81342 5 166 1.26E-20 T 14-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMK01_RS19955 b85ce50a9b15defdf7ae52f4a820a5fc 166 Pfam PF01292 Prokaryotic cytochrome b561 9 165 2.0E-19 T 14-09-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMK01_RS02465 a583693c9c63cb627dc43f23b948960d 120 SUPERFAMILY SSF54427 1 113 2.09E-23 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS02465 a583693c9c63cb627dc43f23b948960d 120 Gene3D G3DSA:3.10.450.50 24 114 1.6E-9 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS02465 a583693c9c63cb627dc43f23b948960d 120 Pfam PF12680 SnoaL-like domain 23 104 1.4E-10 T 14-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK01_RS20565 0f5013e875a05c61ec1dd1e4b48e6b70 226 PANTHER PTHR30614:SF18 5 221 5.7E-100 T 14-09-2016 AMK01_RS20565 0f5013e875a05c61ec1dd1e4b48e6b70 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 215 2.3E-20 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20565 0f5013e875a05c61ec1dd1e4b48e6b70 226 PANTHER PTHR30614 5 221 5.7E-100 T 14-09-2016 AMK01_RS20565 0f5013e875a05c61ec1dd1e4b48e6b70 226 Gene3D G3DSA:1.10.3720.10 15 216 5.6E-47 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20565 0f5013e875a05c61ec1dd1e4b48e6b70 226 SUPERFAMILY SSF161098 14 201 6.8E-47 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20565 0f5013e875a05c61ec1dd1e4b48e6b70 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 110 2.3E-30 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 SUPERFAMILY SSF63380 1 97 2.55E-21 T 14-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 SUPERFAMILY SSF63380 97 199 6.29E-31 T 14-09-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 PIRSF PIRSF000498 1 206 2.7E-70 T 14-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 Pfam PF00677 Lumazine binding domain 104 188 1.0E-18 T 14-09-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 Pfam PF00677 Lumazine binding domain 3 90 1.1E-18 T 14-09-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 Gene3D G3DSA:2.40.30.20 5 108 4.8E-27 T 14-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 Gene3D G3DSA:2.40.30.20 109 199 1.8E-29 T 14-09-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 1.7E-50 T 14-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07700 dad261d4ddf9e3a88fab7b4d1c92ad92 206 PANTHER PTHR21098 1 197 3.9E-80 T 14-09-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.8E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.8E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.8E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 SMART SM00418 8 89 2.9E-15 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 SUPERFAMILY SSF46785 2 93 4.49E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 PANTHER PTHR33154:SF5 1 101 3.1E-23 T 14-09-2016 AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 Gene3D G3DSA:1.10.10.10 2 105 2.1E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 PANTHER PTHR33154 1 101 3.1E-23 T 14-09-2016 AMK01_RS12900 e440db4dadd3fe094799ec67b996c5a3 118 Pfam PF12840 Helix-turn-helix domain 9 69 5.5E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 SUPERFAMILY SSF52540 322 555 1.26E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 15 558 3.3E-197 T 14-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 PANTHER PTHR24222 10 577 8.6E-209 T 14-09-2016 AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 Pfam PF00664 ABC transporter transmembrane region 33 279 2.4E-13 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 SMART SM00382 355 544 2.5E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 PANTHER PTHR24222:SF0 10 577 8.6E-209 T 14-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 Gene3D G3DSA:1.20.1560.10 14 311 1.1E-31 T 14-09-2016 AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 Gene3D G3DSA:3.40.50.300 336 563 2.5E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 Pfam PF00005 ABC transporter 346 496 6.1E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS01850 22c8fa82be18894c319bc69f3116be12 581 SUPERFAMILY SSF90123 14 321 1.01E-39 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS15725 973c58d4617e4cbd29aa2477549732cc 249 PANTHER PTHR13343:SF4 8 216 2.5E-20 T 14-09-2016 AMK01_RS15725 973c58d4617e4cbd29aa2477549732cc 249 PANTHER PTHR13343 8 216 2.5E-20 T 14-09-2016 AMK01_RS15725 973c58d4617e4cbd29aa2477549732cc 249 Gene3D G3DSA:3.20.180.10 168 235 6.2E-10 T 14-09-2016 IPR019595 Domain of unknown function DUF2470 AMK01_RS15725 973c58d4617e4cbd29aa2477549732cc 249 Gene3D G3DSA:2.30.110.10 4 160 1.5E-51 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS15725 973c58d4617e4cbd29aa2477549732cc 249 SUPERFAMILY SSF50475 15 245 3.11E-44 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS15725 973c58d4617e4cbd29aa2477549732cc 249 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 11 154 4.4E-7 T 14-09-2016 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 PANTHER PTHR10458 1 170 1.3E-76 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 Pfam PF01327 Polypeptide deformylase 4 155 6.8E-56 T 14-09-2016 IPR023635 Peptide deformylase AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 Gene3D G3DSA:3.90.45.10 5 167 2.2E-69 T 14-09-2016 IPR023635 Peptide deformylase AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 PIRSF PIRSF004749 1 170 1.2E-59 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 Hamap MF_00163 Peptide deformylase [def]. 2 165 33.689 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 PANTHER PTHR10458:SF10 1 170 1.3E-76 T 14-09-2016 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 161 2.7E-59 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 SUPERFAMILY SSF56420 1 164 1.83E-65 T 14-09-2016 IPR023635 Peptide deformylase AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 PRINTS PR01576 Peptide deformylase signature 33 62 6.5E-39 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 PRINTS PR01576 Peptide deformylase signature 92 103 6.5E-39 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 PRINTS PR01576 Peptide deformylase signature 104 122 6.5E-39 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS02260 b52e85cfe79093f9943c9e0eae70d3bd 171 PRINTS PR01576 Peptide deformylase signature 123 152 6.5E-39 T 14-09-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 Gene3D G3DSA:3.40.50.300 2 234 7.5E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 Gene3D G3DSA:3.40.50.300 295 502 3.3E-26 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 PANTHER PTHR19211:SF45 257 495 8.0E-98 T 14-09-2016 AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 PANTHER PTHR19211:SF45 1 236 8.0E-98 T 14-09-2016 AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 PANTHER PTHR19211 257 495 8.0E-98 T 14-09-2016 AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 PANTHER PTHR19211 1 236 8.0E-98 T 14-09-2016 AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 SUPERFAMILY SSF52540 293 503 5.26E-30 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 Pfam PF00005 ABC transporter 19 152 2.4E-21 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 Pfam PF00005 ABC transporter 323 445 4.8E-10 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 SMART SM00382 322 490 1.1E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 SMART SM00382 27 198 3.5E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS06070 0f77a0e22619cbaf0bb811bd4c352102 506 SUPERFAMILY SSF52540 3 197 7.79E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 Gene3D G3DSA:1.10.10.10 1 146 4.7E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 14-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 Pfam PF12802 MarR family 38 99 3.4E-13 T 14-09-2016 AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 PANTHER PTHR33164:SF4 14 147 2.6E-19 T 14-09-2016 AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 PANTHER PTHR33164 14 147 2.6E-19 T 14-09-2016 AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 5.3E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 146 5.3E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 5.3E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 5.3E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01595 0f39ae71d123740cce958c7d49e72123 147 SUPERFAMILY SSF46785 6 146 1.26E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05200 2dc4fd21af14be373ff46cf57fafbc9d 201 PANTHER PTHR30055:SF23 1 190 5.4E-35 T 14-09-2016 AMK01_RS05200 2dc4fd21af14be373ff46cf57fafbc9d 201 Pfam PF13305 WHG domain 89 173 1.2E-14 T 14-09-2016 IPR025996 WHG domain AMK01_RS05200 2dc4fd21af14be373ff46cf57fafbc9d 201 Gene3D G3DSA:1.10.357.10 1 188 2.3E-34 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS05200 2dc4fd21af14be373ff46cf57fafbc9d 201 SUPERFAMILY SSF48498 82 182 7.79E-15 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS05200 2dc4fd21af14be373ff46cf57fafbc9d 201 SUPERFAMILY SSF46689 3 88 1.44E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS05200 2dc4fd21af14be373ff46cf57fafbc9d 201 PANTHER PTHR30055 1 190 5.4E-35 T 14-09-2016 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 Pfam PF13522 Glutamine amidotransferase domain 67 190 2.9E-19 T 14-09-2016 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 Gene3D G3DSA:3.40.50.10490 243 438 4.0E-55 T 14-09-2016 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 SUPERFAMILY SSF53697 244 608 3.53E-106 T 14-09-2016 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 PANTHER PTHR10937 1 608 3.3E-295 T 14-09-2016 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 PANTHER PTHR10937:SF0 1 608 3.3E-295 T 14-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 Gene3D G3DSA:3.60.20.10 2 232 1.9E-72 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 Pfam PF01380 SIS domain 459 590 2.3E-32 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 Pfam PF01380 SIS domain 293 414 3.9E-25 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 SUPERFAMILY SSF56235 2 232 1.8E-72 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 6.5E-233 T 14-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 38.831 T 14-09-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK01_RS10730 de443ef0f9f6ce0f63e34a574fc461af 608 Gene3D G3DSA:3.40.50.10490 439 608 1.6E-63 T 14-09-2016 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 487 59.236 T 14-09-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 PANTHER PTHR11699 1 487 7.1E-244 T 14-09-2016 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 474 1.4E-235 T 14-09-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 Pfam PF00171 Aldehyde dehydrogenase family 16 476 5.2E-173 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 SUPERFAMILY SSF53720 6 483 5.11E-168 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 Gene3D G3DSA:3.40.605.10 6 262 7.7E-93 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 Gene3D G3DSA:3.40.309.10 263 451 1.8E-70 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS05830 99f8ce6e95d7ac080218443bbc65fa92 487 PANTHER PTHR11699:SF46 1 487 7.1E-244 T 14-09-2016 AMK01_RS20780 327be48fe6b89740c60de0677360f5d7 392 PANTHER PTHR12526 131 309 3.9E-23 T 14-09-2016 AMK01_RS20780 327be48fe6b89740c60de0677360f5d7 392 PANTHER PTHR12526 331 381 3.9E-23 T 14-09-2016 AMK01_RS20780 327be48fe6b89740c60de0677360f5d7 392 SUPERFAMILY SSF53756 112 382 6.8E-29 T 14-09-2016 AMK01_RS20780 327be48fe6b89740c60de0677360f5d7 392 Pfam PF00534 Glycosyl transferases group 1 191 316 3.4E-12 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS20780 327be48fe6b89740c60de0677360f5d7 392 Gene3D G3DSA:3.40.50.2000 172 360 4.0E-9 T 14-09-2016 AMK01_RS01665 ed58bb5fdec7a79e6b9b00dbbb3aff84 233 Pfam PF13280 WYL domain 140 227 6.3E-15 T 14-09-2016 IPR026881 WYL domain AMK01_RS01665 ed58bb5fdec7a79e6b9b00dbbb3aff84 233 Pfam PF08279 HTH domain 6 59 2.1E-17 T 14-09-2016 IPR013196 Helix-turn-helix, type 11 AMK01_RS01665 ed58bb5fdec7a79e6b9b00dbbb3aff84 233 PANTHER PTHR34580 1 206 5.0E-46 T 14-09-2016 AMK01_RS01665 ed58bb5fdec7a79e6b9b00dbbb3aff84 233 Gene3D G3DSA:1.10.10.10 1 63 4.9E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01665 ed58bb5fdec7a79e6b9b00dbbb3aff84 233 SUPERFAMILY SSF46785 1 61 3.25E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01665 ed58bb5fdec7a79e6b9b00dbbb3aff84 233 PANTHER PTHR34580:SF3 1 206 5.0E-46 T 14-09-2016 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 PANTHER PTHR21621:SF4 1 314 6.1E-116 T 14-09-2016 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 Gene3D G3DSA:3.30.1490.20 139 193 2.4E-26 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 SUPERFAMILY SSF52440 6 123 1.04E-39 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 158.726 T 14-09-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 Gene3D G3DSA:3.30.470.20 194 300 1.9E-45 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 Gene3D G3DSA:3.40.50.20 6 131 5.0E-49 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 6 313 8.3E-121 T 14-09-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 126 296 5.8E-73 T 14-09-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 6 122 6.2E-40 T 14-09-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 SUPERFAMILY SSF56059 126 313 3.54E-58 T 14-09-2016 AMK01_RS01795 bf589bbff0a278296dbf2f1b1c949156 315 PANTHER PTHR21621 1 314 6.1E-116 T 14-09-2016 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 Gene3D G3DSA:1.10.3720.10 200 327 2.3E-19 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 Gene3D G3DSA:1.10.3720.10 88 163 2.3E-19 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 2.0E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 SUPERFAMILY SSF161098 91 160 9.81E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 SUPERFAMILY SSF161098 197 319 9.81E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 PANTHER PTHR30465 191 334 3.3E-135 T 14-09-2016 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 PANTHER PTHR30465 1 169 3.3E-135 T 14-09-2016 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 PANTHER PTHR30465:SF0 191 334 3.3E-135 T 14-09-2016 AMK01_RS03860 d2d48c4757972d8aadbd9946937fe481 334 PANTHER PTHR30465:SF0 1 169 3.3E-135 T 14-09-2016 AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.2E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.2E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.2E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 Gene3D G3DSA:3.40.50.720 4 237 1.2E-63 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 7.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 7.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 7.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PANTHER PTHR24322 151 187 7.3E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 PANTHER PTHR24322 9 133 7.3E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13800 929226773188d2490c779f4de593817d 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 2.4E-46 T 14-09-2016 AMK01_RS13800 929226773188d2490c779f4de593817d 241 SUPERFAMILY SSF51735 4 238 1.08E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 SMART SM00919 176 413 6.8E-130 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 ProSitePatterns PS00331 Malic enzymes signature. 172 188 - T 14-09-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 Pfam PF03949 Malic enzyme, NAD binding domain 178 370 1.2E-19 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 Gene3D G3DSA:3.40.50.10380 21 173 8.2E-51 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 PIRSF PIRSF036684 12 770 0.0 T 14-09-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 Gene3D G3DSA:3.40.50.720 174 458 5.2E-82 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 SUPERFAMILY SSF53223 23 174 2.09E-53 T 14-09-2016 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 Pfam PF00390 Malic enzyme, N-terminal domain 32 164 1.1E-28 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 SUPERFAMILY SSF53659 442 766 3.08E-87 T 14-09-2016 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 SMART SM01274 31 164 7.3E-81 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 PANTHER PTHR23406 45 368 8.7E-157 T 14-09-2016 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 PANTHER PTHR23406 385 455 8.7E-157 T 14-09-2016 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 PANTHER PTHR23406:SF23 45 368 8.7E-157 T 14-09-2016 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 PANTHER PTHR23406:SF23 385 455 8.7E-157 T 14-09-2016 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 SUPERFAMILY SSF51735 176 453 1.11E-83 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 Gene3D G3DSA:3.40.50.10750 581 738 1.6E-48 T 14-09-2016 AMK01_RS12055 ee92d929d1daae25c631c8a2fccab548 770 Pfam PF01515 Phosphate acetyl/butaryl transferase 442 763 6.9E-103 T 14-09-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AMK01_RS19020 63ef3ed794f738bedbe943d8ca05bf22 290 Gene3D G3DSA:1.10.3720.10 59 286 5.2E-48 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19020 63ef3ed794f738bedbe943d8ca05bf22 290 PANTHER PTHR30193:SF28 1 289 7.1E-122 T 14-09-2016 AMK01_RS19020 63ef3ed794f738bedbe943d8ca05bf22 290 SUPERFAMILY SSF161098 55 278 1.83E-49 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19020 63ef3ed794f738bedbe943d8ca05bf22 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 288 4.9E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19020 63ef3ed794f738bedbe943d8ca05bf22 290 PANTHER PTHR30193 1 289 7.1E-122 T 14-09-2016 AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 Gene3D G3DSA:3.40.50.920 334 463 2.8E-44 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 SUPERFAMILY SSF52922 329 463 2.22E-41 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 Gene3D G3DSA:3.40.50.970 140 333 3.2E-95 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 SMART SM00861 143 318 2.9E-62 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 SUPERFAMILY SSF52518 143 332 9.68E-68 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 PANTHER PTHR11624:SF11 34 465 1.3E-175 T 14-09-2016 AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 Pfam PF00364 Biotin-requiring enzyme 4 77 5.1E-19 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 Gene3D G3DSA:2.40.50.100 2 97 1.2E-32 T 14-09-2016 AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 SUPERFAMILY SSF51230 1 97 4.84E-28 T 14-09-2016 IPR011053 Single hybrid motif AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 PANTHER PTHR11624 34 465 1.3E-175 T 14-09-2016 IPR033247 Transketolase family AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 Pfam PF02779 Transketolase, pyrimidine binding domain 142 317 5.0E-50 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS09800 0c7f82a196b816a91e5d5fae18353946 465 Pfam PF02780 Transketolase, C-terminal domain 333 452 3.1E-39 T 14-09-2016 IPR033248 Transketolase, C-terminal domain AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 Gene3D G3DSA:3.30.70.120 5 116 2.7E-48 T 14-09-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 PANTHER PTHR30115 3 116 2.0E-75 T 14-09-2016 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 PANTHER PTHR30115:SF15 3 116 2.0E-75 T 14-09-2016 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 ProSitePatterns PS00638 P-II protein C-terminal region signature. 87 100 - T 14-09-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 PRINTS PR00340 P-II protein signature 87 107 3.9E-41 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 PRINTS PR00340 P-II protein signature 56 79 3.9E-41 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 PRINTS PR00340 P-II protein signature 6 21 3.9E-41 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 PRINTS PR00340 P-II protein signature 27 45 3.9E-41 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 SMART SM00938 8 109 2.8E-64 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 SUPERFAMILY SSF54913 5 116 1.33E-43 T 14-09-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 Pfam PF00543 Nitrogen regulatory protein P-II 8 109 2.9E-42 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS20410 3e4e2e81c39fb2ab2309860cef151302 116 PIRSF PIRSF039144 5 116 3.6E-52 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS24575 669fe042df4d2606721293aea7e1cbac 88 PANTHER PTHR23088 28 88 2.0E-19 T 14-09-2016 AMK01_RS24575 669fe042df4d2606721293aea7e1cbac 88 Pfam PF00795 Carbon-nitrogen hydrolase 19 85 4.5E-8 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS24575 669fe042df4d2606721293aea7e1cbac 88 Gene3D G3DSA:3.60.110.10 18 85 1.9E-6 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS24575 669fe042df4d2606721293aea7e1cbac 88 PANTHER PTHR23088:SF29 28 88 2.0E-19 T 14-09-2016 AMK01_RS24575 669fe042df4d2606721293aea7e1cbac 88 SUPERFAMILY SSF56317 18 85 4.58E-11 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 TIGRFAM TIGR00165 S18: ribosomal protein bS18 14 81 1.2E-29 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 SUPERFAMILY SSF46911 10 81 2.22E-27 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 11 82 21.111 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 Gene3D G3DSA:4.10.640.10 17 81 1.9E-31 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 30 80 4.0E-22 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 PANTHER PTHR13479 15 80 3.3E-27 T 14-09-2016 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 PRINTS PR00974 Ribosomal protein S18 family signature 69 79 4.6E-18 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 PRINTS PR00974 Ribosomal protein S18 family signature 37 47 4.6E-18 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 PRINTS PR00974 Ribosomal protein S18 family signature 47 54 4.6E-18 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 PRINTS PR00974 Ribosomal protein S18 family signature 55 69 4.6E-18 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 ProSitePatterns PS00057 Ribosomal protein S18 signature. 30 53 - T 14-09-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07365 3336aa419e31f235ba50298be26c38ea 82 Pfam PF01084 Ribosomal protein S18 29 77 9.4E-25 T 14-09-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 Pfam PF07568 Histidine kinase 159 233 5.0E-20 T 14-09-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 Pfam PF13581 Histidine kinase-like ATPase domain 249 314 2.5E-11 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 Pfam PF00072 Response regulator receiver domain 14 117 1.3E-17 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 PANTHER PTHR26402 231 252 1.2E-22 T 14-09-2016 AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 PANTHER PTHR26402 12 144 1.2E-22 T 14-09-2016 AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 SMART SM00448 12 125 5.1E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 SUPERFAMILY SSF55874 220 343 6.81E-16 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 SUPERFAMILY SSF52172 13 163 3.27E-28 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 SMART SM00387 255 352 3.9E-6 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 Gene3D G3DSA:3.30.565.10 214 349 4.4E-13 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12945 d177e659cc88eb3d68bd8c9c0839054d 354 Gene3D G3DSA:3.40.50.2300 12 144 1.4E-26 T 14-09-2016 AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.3E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.3E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.3E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.3E-17 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PANTHER PTHR24322 11 140 9.1E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PANTHER PTHR24322 156 187 9.1E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 Gene3D G3DSA:3.40.50.720 7 243 5.3E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.4E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.4E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.4E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PANTHER PTHR24322:SF211 11 140 9.1E-48 T 14-09-2016 AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 PANTHER PTHR24322:SF211 156 187 9.1E-48 T 14-09-2016 AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 SUPERFAMILY SSF51735 7 244 4.85E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07540 328a5a364654def7037d192ea6c7044b 255 Pfam PF00106 short chain dehydrogenase 9 187 9.4E-35 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 PANTHER PTHR18964 64 391 4.5E-28 T 14-09-2016 AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 PANTHER PTHR18964:SF108 64 391 4.5E-28 T 14-09-2016 AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 Gene3D G3DSA:3.30.420.40 224 360 4.0E-15 T 14-09-2016 AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 56 2.8E-7 T 14-09-2016 AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 SUPERFAMILY SSF53067 86 386 8.84E-28 T 14-09-2016 AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 SUPERFAMILY SSF46785 8 76 2.33E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 Pfam PF00480 ROK family 120 383 7.1E-21 T 14-09-2016 IPR000600 ROK family AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 Gene3D G3DSA:3.30.420.40 82 223 1.9E-26 T 14-09-2016 AMK01_RS10495 7b4200306fb2f95b81e418fa3696b6a9 399 Gene3D G3DSA:1.10.10.10 7 81 3.1E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 TIGRFAM TIGR00033 aroC: chorismate synthase 10 360 7.8E-122 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 Hamap MF_00300 Chorismate synthase [aroC]. 10 362 35.288 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 SUPERFAMILY SSF103263 3 360 4.32E-136 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 Pfam PF01264 Chorismate synthase 10 355 1.0E-127 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 PANTHER PTHR21085 2 360 1.8E-179 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-09-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 ProSitePatterns PS00789 Chorismate synthase signature 3. 329 345 - T 14-09-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 PIRSF PIRSF001456 3 365 1.8E-127 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04750 c90819d3f7ee8a2930a3c01d1ef416f2 365 Gene3D G3DSA:3.60.150.10 9 361 1.0E-145 T 14-09-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS20140 0e8563b299b95047d610beca3cdecc3c 695 Gene3D G3DSA:1.10.1370.10 513 686 1.5E-111 T 14-09-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMK01_RS20140 0e8563b299b95047d610beca3cdecc3c 695 Gene3D G3DSA:1.10.1370.10 149 355 1.5E-111 T 14-09-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMK01_RS20140 0e8563b299b95047d610beca3cdecc3c 695 SUPERFAMILY SSF55486 18 679 3.66E-182 T 14-09-2016 AMK01_RS20140 0e8563b299b95047d610beca3cdecc3c 695 PANTHER PTHR11804:SF47 8 685 8.5E-305 T 14-09-2016 AMK01_RS20140 0e8563b299b95047d610beca3cdecc3c 695 Gene3D G3DSA:1.20.1050.40 20 147 3.4E-20 T 14-09-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AMK01_RS20140 0e8563b299b95047d610beca3cdecc3c 695 Gene3D G3DSA:3.40.390.10 365 512 1.1E-50 T 14-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK01_RS20140 0e8563b299b95047d610beca3cdecc3c 695 Pfam PF01432 Peptidase family M3 233 681 1.8E-119 T 14-09-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AMK01_RS20140 0e8563b299b95047d610beca3cdecc3c 695 PANTHER PTHR11804 8 685 8.5E-305 T 14-09-2016 AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 SMART SM00382 422 627 0.0084 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 PANTHER PTHR22683:SF41 181 774 2.7E-233 T 14-09-2016 AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 SUPERFAMILY SSF46785 715 778 7.53E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 Gene3D G3DSA:3.40.50.300 364 526 9.5E-95 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 Gene3D G3DSA:3.40.50.300 559 671 9.5E-95 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 Pfam PF01580 FtsK/SpoIIIE family 388 606 1.5E-65 T 14-09-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 SUPERFAMILY SSF52540 366 677 2.45E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 SMART SM00843 714 779 1.3E-34 T 14-09-2016 IPR018541 FtsK gamma domain AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 PANTHER PTHR22683 181 774 2.7E-233 T 14-09-2016 AMK01_RS00915 b833b74e6acb50f8158483646e25f3e7 782 Pfam PF09397 Ftsk gamma domain 716 775 3.2E-25 T 14-09-2016 IPR018541 FtsK gamma domain AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 Gene3D G3DSA:1.10.10.10 1 83 8.9E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.7E-13 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 Gene3D G3DSA:3.40.190.10 170 266 1.0E-24 T 14-09-2016 AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 Pfam PF03466 LysR substrate binding domain 92 294 1.0E-24 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 Gene3D G3DSA:3.40.190.10 270 297 3.9E-23 T 14-09-2016 AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 Gene3D G3DSA:3.40.190.10 91 169 3.9E-23 T 14-09-2016 AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 PANTHER PTHR30118:SF5 1 291 4.4E-91 T 14-09-2016 AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 SUPERFAMILY SSF53850 92 293 6.88E-37 T 14-09-2016 AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 PANTHER PTHR30118 1 291 4.4E-91 T 14-09-2016 AMK01_RS05000 4322b2437c69b03ddd31f193fea979f9 299 SUPERFAMILY SSF46785 2 80 2.72E-14 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17750 1ba7ca6c1d05df7b652149ab7c6d2615 184 SMART SM00855 4 146 9.7E-15 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS17750 1ba7ca6c1d05df7b652149ab7c6d2615 184 PANTHER PTHR23029 10 159 4.2E-19 T 14-09-2016 AMK01_RS17750 1ba7ca6c1d05df7b652149ab7c6d2615 184 SUPERFAMILY SSF53254 4 181 1.28E-38 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS17750 1ba7ca6c1d05df7b652149ab7c6d2615 184 PANTHER PTHR23029:SF1 10 159 4.2E-19 T 14-09-2016 AMK01_RS17750 1ba7ca6c1d05df7b652149ab7c6d2615 184 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 181 1.5E-32 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS17750 1ba7ca6c1d05df7b652149ab7c6d2615 184 Gene3D G3DSA:3.40.50.1240 3 181 5.3E-33 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 268 4.4E-15 T 14-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 Gene3D G3DSA:2.40.110.10 159 264 2.7E-24 T 14-09-2016 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 SUPERFAMILY SSF47203 285 461 3.54E-46 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 413 432 - T 14-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 PANTHER PTHR10909:SF296 2 475 6.7E-188 T 14-09-2016 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 585 8.0E-18 T 14-09-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 SUPERFAMILY SSF56645 36 270 1.44E-56 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 Gene3D G3DSA:1.20.140.10 265 459 6.7E-56 T 14-09-2016 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 287 451 8.7E-24 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 37 155 2.0E-13 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 PANTHER PTHR10909 2 475 6.7E-188 T 14-09-2016 AMK01_RS04610 c60f5b6aa0fc3132810bc84e65376d65 591 Gene3D G3DSA:1.10.540.10 37 157 6.2E-19 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK01_RS19170 afb0ad9fe8efe7766f7e9447452d9fc7 236 PANTHER PTHR11587 1 218 6.3E-52 T 14-09-2016 AMK01_RS19170 afb0ad9fe8efe7766f7e9447452d9fc7 236 Gene3D G3DSA:3.40.50.620 1 225 8.3E-65 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS19170 afb0ad9fe8efe7766f7e9447452d9fc7 236 Pfam PF06508 Queuosine biosynthesis protein QueC 3 208 2.0E-54 T 14-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK01_RS19170 afb0ad9fe8efe7766f7e9447452d9fc7 236 PIRSF PIRSF006293 1 221 7.9E-77 T 14-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK01_RS19170 afb0ad9fe8efe7766f7e9447452d9fc7 236 PANTHER PTHR11587:SF3 1 218 6.3E-52 T 14-09-2016 AMK01_RS19170 afb0ad9fe8efe7766f7e9447452d9fc7 236 SUPERFAMILY SSF52402 1 224 2.87E-57 T 14-09-2016 AMK01_RS19170 afb0ad9fe8efe7766f7e9447452d9fc7 236 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 1 215 47.862 T 14-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK01_RS19170 afb0ad9fe8efe7766f7e9447452d9fc7 236 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 202 8.1E-54 T 14-09-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK01_RS17705 2e82f9c37b37f7e1ae4e95105a6778ba 501 PANTHER PTHR35342:SF2 2 501 3.3E-283 T 14-09-2016 AMK01_RS17705 2e82f9c37b37f7e1ae4e95105a6778ba 501 PANTHER PTHR35342 2 501 3.3E-283 T 14-09-2016 AMK01_RS17705 2e82f9c37b37f7e1ae4e95105a6778ba 501 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 1.0E-147 T 14-09-2016 IPR002823 Protein of unknown function DUF112, transmembrane AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 9.3E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 9.3E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 9.3E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 256 1.4E-59 T 14-09-2016 AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 SUPERFAMILY SSF51735 3 257 3.26E-79 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 Gene3D G3DSA:3.40.50.720 3 256 1.3E-81 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.9E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.9E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.9E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 3 257 2.0E-116 T 14-09-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PANTHER PTHR24322 153 185 1.6E-57 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS15890 3d46f153c0baab4f1f77d48443fb5833 258 PANTHER PTHR24322 7 137 1.6E-57 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 PANTHER PTHR24031 9 385 5.0E-135 T 14-09-2016 AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 PANTHER PTHR24031:SF145 9 385 5.0E-135 T 14-09-2016 AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 Pfam PF03880 DbpA RNA binding domain 470 540 4.0E-16 T 14-09-2016 IPR005580 DbpA, RNA-binding domain AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 Pfam PF00270 DEAD/DEAH box helicase 24 195 2.2E-39 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 SUPERFAMILY SSF52540 75 350 2.04E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 SMART SM00490 258 339 1.1E-29 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 SMART SM00487 19 217 1.5E-50 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 Gene3D G3DSA:3.40.50.300 6 210 1.1E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 Pfam PF00271 Helicase conserved C-terminal domain 234 339 4.1E-26 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMK01_RS11170 66df69ffe1de0da3bc174322d0bd7e8d 651 Gene3D G3DSA:3.40.50.300 211 366 1.7E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 Pfam PF13229 Right handed beta helix region 112 233 1.2E-9 T 14-09-2016 AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SMART SM00710 224 255 1900.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SMART SM00710 174 196 1500.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SMART SM00710 256 278 400.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SMART SM00710 387 408 5800.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SMART SM00710 303 324 1700.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SMART SM00710 197 219 22.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SMART SM00710 334 360 4300.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SMART SM00710 279 301 1000.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 TIGRFAM TIGR03807 RR_fam_repeat: putative cofactor-binding repeat 321 342 1.9E-5 T 14-09-2016 IPR022444 Cofactor-binding repeat, putative AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 TIGRFAM TIGR03807 RR_fam_repeat: putative cofactor-binding repeat 382 401 1.2E-4 T 14-09-2016 IPR022444 Cofactor-binding repeat, putative AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 SUPERFAMILY SSF51126 44 427 2.91E-41 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 Gene3D G3DSA:2.160.20.10 36 350 4.0E-20 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 TIGRFAM TIGR03808 RR_plus_rpt_1: twin-arg-translocated uncharacterized repeat protein 18 460 6.3E-118 T 14-09-2016 IPR022388 Conserved hypothetical protein CHP03808 AMK01_RS05960 0d541dffd6cb101033826ffc9f314a2b 461 Pfam PF05048 Periplasmic copper-binding protein (NosD) 237 447 3.9E-8 T 14-09-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 Gene3D G3DSA:3.40.1360.10 243 380 7.7E-47 T 14-09-2016 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 Gene3D G3DSA:3.90.580.10 1 101 5.7E-34 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 SUPERFAMILY SSF57783 1 103 1.29E-31 T 14-09-2016 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 Hamap MF_00974 DNA primase [dnaG]. 2 631 25.357 T 14-09-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 Gene3D G3DSA:3.90.980.10 117 242 3.8E-42 T 14-09-2016 IPR013264 DNA primase, catalytic core, N-terminal AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 Pfam PF01807 CHC2 zinc finger 5 101 5.7E-27 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 PIRSF PIRSF002811 1 637 1.6E-137 T 14-09-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 PANTHER PTHR30313 1 665 3.4E-125 T 14-09-2016 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 TIGRFAM TIGR01391 dnaG: DNA primase 3 431 6.8E-129 T 14-09-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 SUPERFAMILY SSF56731 116 437 1.31E-103 T 14-09-2016 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 SMART SM00493 272 343 1.0E-14 T 14-09-2016 IPR006171 Toprim domain AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 Pfam PF10410 DnaB-helicase binding domain of primase 382 433 2.8E-7 T 14-09-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 Pfam PF13662 Toprim domain 273 339 2.2E-17 T 14-09-2016 IPR006171 Toprim domain AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 SMART SM00400 39 93 1.9E-23 T 14-09-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK01_RS15115 9ca1a05b30889c9deae871c300d523ec 666 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 253 2.8E-42 T 14-09-2016 IPR013264 DNA primase, catalytic core, N-terminal AMK01_RS20120 1609fcc595531d8524c65404d61b8ae6 103 SMART SM01152 8 89 1.5E-33 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AMK01_RS20120 1609fcc595531d8524c65404d61b8ae6 103 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 100 19.504 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AMK01_RS20120 1609fcc595531d8524c65404d61b8ae6 103 SUPERFAMILY SSF69786 3 92 2.22E-22 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AMK01_RS20120 1609fcc595531d8524c65404d61b8ae6 103 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 88 4.2E-24 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AMK01_RS20120 1609fcc595531d8524c65404d61b8ae6 103 Gene3D G3DSA:3.30.1200.10 3 97 2.6E-24 T 14-09-2016 IPR003746 Protein of unknown function DUF167 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PRINTS PR00471 Acetate kinase family signature 202 223 2.1E-32 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PRINTS PR00471 Acetate kinase family signature 175 188 2.1E-32 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PRINTS PR00471 Acetate kinase family signature 296 309 2.1E-32 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PRINTS PR00471 Acetate kinase family signature 318 334 2.1E-32 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PRINTS PR00471 Acetate kinase family signature 7 18 2.1E-32 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PRINTS PR00471 Acetate kinase family signature 370 382 2.1E-32 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 TIGRFAM TIGR00016 ackA: acetate kinase 5 387 1.4E-91 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PANTHER PTHR21060:SF11 3 390 1.7E-115 T 14-09-2016 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 Hamap MF_00020 Acetate kinase [ackA]. 1 392 132.752 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 SUPERFAMILY SSF53067 161 390 9.07E-69 T 14-09-2016 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-09-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PANTHER PTHR21060 3 390 1.7E-115 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 PIRSF PIRSF000722 3 392 5.5E-124 T 14-09-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 SUPERFAMILY SSF53067 6 195 1.04E-48 T 14-09-2016 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 Pfam PF00871 Acetokinase family 7 382 3.4E-89 T 14-09-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 Gene3D G3DSA:3.30.420.40 205 387 6.6E-62 T 14-09-2016 AMK01_RS17760 f24a8c6333d8d1231adfc2cb8d4c234b 392 Gene3D G3DSA:3.30.420.40 124 204 4.7E-5 T 14-09-2016 AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 PIRSF PIRSF001413 11 405 1.9E-159 T 14-09-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 Gene3D G3DSA:3.40.50.1100 110 188 2.3E-21 T 14-09-2016 AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 14-09-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 SUPERFAMILY SSF53686 14 400 1.83E-147 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 Gene3D G3DSA:3.40.50.1100 189 404 3.9E-96 T 14-09-2016 AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 65 389 1.3E-47 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 PANTHER PTHR10314:SF3 18 398 5.8E-231 T 14-09-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 13 402 51.983 T 14-09-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 PANTHER PTHR10314 18 398 5.8E-231 T 14-09-2016 AMK01_RS00110 e3044d25817be866f4aa02a2d3f9fc9b 406 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 18 400 2.1E-191 T 14-09-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK01_RS18520 460a80177e58b3f2d4c12b3f684fd3ad 805 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 524 804 3.8E-56 T 14-09-2016 IPR007296 Domain of unknown function DUF403 AMK01_RS18520 460a80177e58b3f2d4c12b3f684fd3ad 805 PANTHER PTHR34595:SF1 1 804 4.2E-261 T 14-09-2016 AMK01_RS18520 460a80177e58b3f2d4c12b3f684fd3ad 805 PANTHER PTHR34595 1 804 4.2E-261 T 14-09-2016 AMK01_RS18520 460a80177e58b3f2d4c12b3f684fd3ad 805 Pfam PF14403 Circularly permuted ATP-grasp type 2 98 476 4.4E-141 T 14-09-2016 IPR025841 Circularly permuted ATP-grasp type 2 AMK01_RS18520 460a80177e58b3f2d4c12b3f684fd3ad 805 SUPERFAMILY SSF56059 69 236 3.5E-15 T 14-09-2016 AMK01_RS18520 460a80177e58b3f2d4c12b3f684fd3ad 805 SUPERFAMILY SSF56059 341 438 3.5E-15 T 14-09-2016 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 SMART SM00382 28 216 3.0E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 SUPERFAMILY SSF52540 4 243 1.77E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 PANTHER PTHR24220 5 265 3.7E-149 T 14-09-2016 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 PANTHER PTHR24220 282 316 3.7E-149 T 14-09-2016 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 Gene3D G3DSA:2.40.50.100 358 369 3.3E-10 T 14-09-2016 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 Gene3D G3DSA:2.40.50.100 239 286 3.3E-10 T 14-09-2016 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 Gene3D G3DSA:3.40.50.300 3 234 4.0E-77 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 Pfam PF00005 ABC transporter 19 161 1.8E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 PANTHER PTHR24220:SF151 5 265 3.7E-149 T 14-09-2016 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 PANTHER PTHR24220:SF151 282 316 3.7E-149 T 14-09-2016 AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 SUPERFAMILY SSF50331 237 372 5.35E-24 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 Gene3D G3DSA:2.40.50.140 287 357 9.8E-14 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS13645 779c14aff142b25e34002e17589c08d8 381 Pfam PF08402 TOBE domain 282 364 5.4E-8 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS12010 1381165286f90149ad5720710352590f 456 PANTHER PTHR36698 2 292 2.2E-56 T 14-09-2016 AMK01_RS12010 1381165286f90149ad5720710352590f 456 PANTHER PTHR36698:SF2 2 292 2.2E-56 T 14-09-2016 AMK01_RS12010 1381165286f90149ad5720710352590f 456 SUPERFAMILY SSF58104 156 354 4.19E-8 T 14-09-2016 AMK01_RS12010 1381165286f90149ad5720710352590f 456 Pfam PF02470 MlaD protein 47 115 3.6E-11 T 14-09-2016 IPR003399 Mce/MlaD AMK01_RS19340 9b533371f710b0a1bbe4df6355df830b 85 Pfam PF00462 Glutaredoxin 4 64 4.8E-18 T 14-09-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMK01_RS19340 9b533371f710b0a1bbe4df6355df830b 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 2.5E-35 T 14-09-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 AMK01_RS19340 9b533371f710b0a1bbe4df6355df830b 85 PANTHER PTHR10168 3 83 2.1E-23 T 14-09-2016 AMK01_RS19340 9b533371f710b0a1bbe4df6355df830b 85 PRINTS PR00160 Glutaredoxin signature 47 60 5.1E-15 T 14-09-2016 IPR014025 Glutaredoxin subgroup AMK01_RS19340 9b533371f710b0a1bbe4df6355df830b 85 PRINTS PR00160 Glutaredoxin signature 4 22 5.1E-15 T 14-09-2016 IPR014025 Glutaredoxin subgroup AMK01_RS19340 9b533371f710b0a1bbe4df6355df830b 85 PRINTS PR00160 Glutaredoxin signature 61 74 5.1E-15 T 14-09-2016 IPR014025 Glutaredoxin subgroup AMK01_RS19340 9b533371f710b0a1bbe4df6355df830b 85 SUPERFAMILY SSF52833 3 84 3.34E-27 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19340 9b533371f710b0a1bbe4df6355df830b 85 Gene3D G3DSA:3.40.30.10 3 80 9.6E-27 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 PIRSF PIRSF001369 37 429 7.0E-168 T 14-09-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 Pfam PF00285 Citrate synthase, C-terminal domain 46 412 1.2E-132 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 12 423 2.4E-241 T 14-09-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 PANTHER PTHR11739 41 429 1.8E-199 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 SUPERFAMILY SSF48256 3 429 2.75E-167 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 Gene3D G3DSA:1.10.580.10 52 280 2.7E-99 T 14-09-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 PRINTS PR00143 Citrate synthase signature 241 269 6.2E-56 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 PRINTS PR00143 Citrate synthase signature 380 394 6.2E-56 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 PRINTS PR00143 Citrate synthase signature 296 316 6.2E-56 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 PRINTS PR00143 Citrate synthase signature 360 376 6.2E-56 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 PRINTS PR00143 Citrate synthase signature 219 234 6.2E-56 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 PRINTS PR00143 Citrate synthase signature 165 178 6.2E-56 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 Gene3D G3DSA:1.10.230.10 281 374 1.2E-41 T 14-09-2016 IPR016143 Citrate synthase-like, small alpha subdomain AMK01_RS09760 1c758095c20f408933e193d7e5b7389b 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-09-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 SUPERFAMILY SSF53850 91 299 6.52E-39 T 14-09-2016 AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 Gene3D G3DSA:1.10.10.10 4 84 2.5E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.2E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 Gene3D G3DSA:3.40.190.10 174 263 3.9E-14 T 14-09-2016 AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 SUPERFAMILY SSF46785 3 112 7.04E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 Gene3D G3DSA:3.40.190.10 92 173 9.0E-28 T 14-09-2016 AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 Pfam PF03466 LysR substrate binding domain 90 293 1.4E-35 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 PANTHER PTHR30537:SF5 1 292 1.1E-89 T 14-09-2016 AMK01_RS16390 802fa649cb9486700e8ecab1d0f65742 305 PANTHER PTHR30537 1 292 1.1E-89 T 14-09-2016 AMK01_RS01960 34ed8c9f854eb25214af9e1765468d1b 92 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.648 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS01960 34ed8c9f854eb25214af9e1765468d1b 92 Pfam PF01649 Ribosomal protein S20 2 84 4.3E-25 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS01960 34ed8c9f854eb25214af9e1765468d1b 92 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 87 6.0E-17 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS01960 34ed8c9f854eb25214af9e1765468d1b 92 PANTHER PTHR33398 1 86 5.8E-30 T 14-09-2016 AMK01_RS01960 34ed8c9f854eb25214af9e1765468d1b 92 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.8E-22 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS01960 34ed8c9f854eb25214af9e1765468d1b 92 Gene3D G3DSA:1.20.58.110 1 86 1.0E-28 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS01960 34ed8c9f854eb25214af9e1765468d1b 92 SUPERFAMILY SSF46992 3 86 9.16E-28 T 14-09-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 Gene3D G3DSA:1.10.10.60 238 281 6.9E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 SUPERFAMILY SSF46689 237 282 3.0E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 PANTHER PTHR11019:SF81 23 287 4.9E-60 T 14-09-2016 AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 Gene3D G3DSA:1.10.10.60 183 237 4.7E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 Pfam PF06719 AraC-type transcriptional regulator N-terminus 22 172 5.8E-40 T 14-09-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 Pfam PF12833 Helix-turn-helix domain 207 281 2.2E-20 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 SUPERFAMILY SSF46689 184 235 3.32E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 PANTHER PTHR11019 23 287 4.9E-60 T 14-09-2016 AMK01_RS05375 ff2cbe3c845f66be8df7c5023b071242 290 SMART SM00342 201 284 9.8E-23 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 9.1E-32 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 9.1E-32 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 9.1E-32 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 228 239 9.1E-32 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 9.1E-32 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 9.1E-32 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 493 6.5E-155 T 14-09-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 SUPERFAMILY SSF52374 4 356 3.22E-108 T 14-09-2016 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 Pfam PF09334 tRNA synthetases class I (M) 7 365 8.6E-112 T 14-09-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 PANTHER PTHR11946:SF1 3 511 1.4E-243 T 14-09-2016 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 SUPERFAMILY SSF47323 354 510 1.44E-38 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 PANTHER PTHR11946 3 511 1.4E-243 T 14-09-2016 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 Gene3D G3DSA:2.170.220.10 118 229 3.8E-47 T 14-09-2016 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 510 47.659 T 14-09-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 Gene3D G3DSA:3.40.50.620 4 115 5.1E-72 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 Gene3D G3DSA:3.40.50.620 230 339 5.1E-72 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS11055 06432eb261b4ce320a85819bad0fc3a0 516 Gene3D G3DSA:1.10.730.10 342 510 3.1E-52 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PANTHER PTHR30081 245 552 1.3E-102 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PANTHER PTHR30081 154 212 1.3E-102 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PANTHER PTHR30081:SF1 154 212 1.3E-102 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 569 814 5.0E-79 T 14-09-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PANTHER PTHR30081:SF1 40 97 1.3E-102 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 SUPERFAMILY SSF82866 324 523 4.19E-44 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PANTHER PTHR30081 40 97 1.3E-102 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 541 825 28.39 T 14-09-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PRINTS PR01755 Bacterial translocase SecF protein signature 682 696 1.4E-31 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PRINTS PR01755 Bacterial translocase SecF protein signature 730 748 1.4E-31 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PRINTS PR01755 Bacterial translocase SecF protein signature 568 583 1.4E-31 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PRINTS PR01755 Bacterial translocase SecF protein signature 762 777 1.4E-31 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 Gene3D G3DSA:1.20.1640.10 344 526 2.2E-28 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 Gene3D G3DSA:1.20.1640.10 670 829 1.8E-26 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 PANTHER PTHR30081:SF1 245 552 1.3E-102 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 SUPERFAMILY SSF82866 608 822 4.32E-40 T 14-09-2016 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 Pfam PF02355 Protein export membrane protein 350 518 1.4E-19 T 14-09-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 Pfam PF02355 Protein export membrane protein 645 821 4.3E-65 T 14-09-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 47 515 2.1E-119 T 14-09-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 528 35.83 T 14-09-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 278 508 1.8E-70 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 620 811 2.5E-56 T 14-09-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 Pfam PF07549 SecD/SecF GG Motif 564 588 9.6E-8 T 14-09-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMK01_RS09260 d579fb911861bf8f8670ac888fe4a232 846 Pfam PF07549 SecD/SecF GG Motif 47 63 3.6E-4 T 14-09-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 SMART SM01091 358 437 5.6E-28 T 14-09-2016 IPR005170 Transporter-associated domain AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 PANTHER PTHR22777 11 436 1.0E-132 T 14-09-2016 AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 Gene3D G3DSA:3.10.580.10 212 352 7.5E-16 T 14-09-2016 AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 Pfam PF00571 CBS domain 296 345 8.6E-8 T 14-09-2016 IPR000644 CBS domain AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 SMART SM00116 235 284 15.0 T 14-09-2016 IPR000644 CBS domain AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 SMART SM00116 297 345 0.0025 T 14-09-2016 IPR000644 CBS domain AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 Pfam PF03471 Transporter associated domain 359 435 7.3E-19 T 14-09-2016 IPR005170 Transporter-associated domain AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 SUPERFAMILY SSF54631 214 347 3.77E-25 T 14-09-2016 AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 Gene3D G3DSA:3.30.465.10 353 436 2.2E-24 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 SUPERFAMILY SSF56176 355 438 3.82E-21 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS13925 20454cb870cc6c23628af2aa84c1f52f 443 Pfam PF01595 Domain of unknown function DUF21 16 208 1.8E-45 T 14-09-2016 IPR002550 Domain of unknown function DUF21 AMK01_RS11545 9736fcd407587638c9b3336783d285ae 388 Gene3D G3DSA:3.40.640.10 18 254 1.5E-60 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS11545 9736fcd407587638c9b3336783d285ae 388 Gene3D G3DSA:3.90.1150.10 255 376 5.8E-32 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS11545 9736fcd407587638c9b3336783d285ae 388 PANTHER PTHR11601:SF45 4 377 2.4E-102 T 14-09-2016 AMK01_RS11545 9736fcd407587638c9b3336783d285ae 388 PIRSF PIRSF005572 3 384 6.1E-108 T 14-09-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK01_RS11545 9736fcd407587638c9b3336783d285ae 388 Pfam PF00266 Aminotransferase class-V 7 369 9.1E-54 T 14-09-2016 IPR000192 Aminotransferase class V domain AMK01_RS11545 9736fcd407587638c9b3336783d285ae 388 PANTHER PTHR11601 4 377 2.4E-102 T 14-09-2016 AMK01_RS11545 9736fcd407587638c9b3336783d285ae 388 SUPERFAMILY SSF53383 4 377 7.85E-87 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS06335 b3efcaaf028784f70f38c240f1347599 286 SUPERFAMILY SSF54593 7 172 7.65E-35 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06335 b3efcaaf028784f70f38c240f1347599 286 Gene3D G3DSA:3.10.180.10 4 167 1.6E-28 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06335 b3efcaaf028784f70f38c240f1347599 286 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 174 265 3.0E-7 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS06335 b3efcaaf028784f70f38c240f1347599 286 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 127 5.3E-6 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS06335 b3efcaaf028784f70f38c240f1347599 286 PANTHER PTHR10374:SF14 1 178 2.6E-47 T 14-09-2016 AMK01_RS06335 b3efcaaf028784f70f38c240f1347599 286 Gene3D G3DSA:3.10.180.10 168 284 3.3E-19 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06335 b3efcaaf028784f70f38c240f1347599 286 SUPERFAMILY SSF54593 172 284 2.69E-23 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06335 b3efcaaf028784f70f38c240f1347599 286 PANTHER PTHR10374 1 178 2.6E-47 T 14-09-2016 AMK01_RS05455 ff6d0a6dc06768c2b3c56280e1173dc0 201 Pfam PF13410 Glutathione S-transferase, C-terminal domain 124 188 2.8E-6 T 14-09-2016 AMK01_RS05455 ff6d0a6dc06768c2b3c56280e1173dc0 201 PANTHER PTHR11260 1 196 6.1E-29 T 14-09-2016 AMK01_RS05455 ff6d0a6dc06768c2b3c56280e1173dc0 201 SUPERFAMILY SSF52833 1 76 1.35E-16 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05455 ff6d0a6dc06768c2b3c56280e1173dc0 201 Gene3D G3DSA:3.40.30.10 1 86 1.5E-18 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05455 ff6d0a6dc06768c2b3c56280e1173dc0 201 SUPERFAMILY SSF47616 78 198 4.32E-21 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS05455 ff6d0a6dc06768c2b3c56280e1173dc0 201 Gene3D G3DSA:1.20.1050.10 87 196 2.2E-20 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS05455 ff6d0a6dc06768c2b3c56280e1173dc0 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 13 68 1.5E-10 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 SUPERFAMILY SSF47384 18 83 7.85E-13 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 Gene3D G3DSA:1.10.287.130 17 83 5.2E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 Gene3D G3DSA:3.30.565.10 90 237 3.9E-31 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 133 237 6.8E-17 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 SMART SM00387 128 238 2.4E-22 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 PANTHER PTHR24423 18 236 2.4E-49 T 14-09-2016 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 SUPERFAMILY SSF55874 83 236 6.68E-31 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 SMART SM00388 20 88 2.5E-6 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 Pfam PF00512 His Kinase A (phospho-acceptor) domain 22 83 1.2E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 PRINTS PR00344 Bacterial sensor protein C-terminal signature 184 194 5.0E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 PRINTS PR00344 Bacterial sensor protein C-terminal signature 166 180 5.0E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 PRINTS PR00344 Bacterial sensor protein C-terminal signature 223 236 5.0E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03345 048a289ab3a9a97eda1e50bfec5bbf0b 238 PRINTS PR00344 Bacterial sensor protein C-terminal signature 199 217 5.0E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 SUPERFAMILY SSF53659 441 757 6.99E-88 T 14-09-2016 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 Pfam PF00390 Malic enzyme, N-terminal domain 29 161 2.6E-26 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 SUPERFAMILY SSF53223 19 171 1.51E-52 T 14-09-2016 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 PIRSF PIRSF036684 8 760 0.0 T 14-09-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 SUPERFAMILY SSF51735 173 462 1.53E-84 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 Gene3D G3DSA:3.40.50.10750 583 732 7.7E-50 T 14-09-2016 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 Gene3D G3DSA:3.40.50.720 171 458 2.9E-86 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 SMART SM00919 173 410 1.3E-136 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 PANTHER PTHR23406:SF23 382 464 2.0E-156 T 14-09-2016 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 PANTHER PTHR23406 39 365 2.0E-156 T 14-09-2016 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 14-09-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 Pfam PF01515 Phosphate acetyl/butaryl transferase 441 756 6.9E-103 T 14-09-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 Pfam PF03949 Malic enzyme, NAD binding domain 175 369 7.2E-24 T 14-09-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 PANTHER PTHR23406 382 464 2.0E-156 T 14-09-2016 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 PANTHER PTHR23406:SF23 39 365 2.0E-156 T 14-09-2016 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 Gene3D G3DSA:3.40.50.10380 17 170 4.3E-48 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK01_RS02145 7a8c6bfc3ff0de683a95c9bdd6839d73 760 SMART SM01274 28 161 8.1E-79 T 14-09-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK01_RS02005 97f6e671b2ca978e48dc4e42a85eb0e1 314 PANTHER PTHR12304 5 314 2.9E-153 T 14-09-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AMK01_RS02005 97f6e671b2ca978e48dc4e42a85eb0e1 314 PANTHER PTHR12304:SF19 5 314 2.9E-153 T 14-09-2016 AMK01_RS02005 97f6e671b2ca978e48dc4e42a85eb0e1 314 SUPERFAMILY SSF53590 5 312 6.15E-105 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS02005 97f6e671b2ca978e48dc4e42a85eb0e1 314 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 305 6.6E-79 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS02005 97f6e671b2ca978e48dc4e42a85eb0e1 314 Gene3D G3DSA:3.90.245.10 4 313 1.0E-113 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 PANTHER PTHR31689 1 289 3.1E-85 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 SUPERFAMILY SSF54506 5 131 1.22E-32 T 14-09-2016 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 Gene3D G3DSA:3.10.310.10 2 119 1.1E-35 T 14-09-2016 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 5 285 31.746 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 SUPERFAMILY SSF54506 143 283 1.83E-40 T 14-09-2016 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 Pfam PF01678 Diaminopimelate epimerase 158 277 2.2E-17 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 Pfam PF01678 Diaminopimelate epimerase 7 123 5.2E-18 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 Gene3D G3DSA:3.10.310.10 120 273 6.5E-43 T 14-09-2016 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 6 282 4.0E-57 T 14-09-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS20315 31040364736258b1883dec3ebb9d48b0 301 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 14-09-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 SUPERFAMILY SSF51269 272 337 3.66E-16 T 14-09-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 Gene3D G3DSA:3.90.1210.10 281 337 9.4E-17 T 14-09-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 SUPERFAMILY SSF51569 9 290 2.93E-79 T 14-09-2016 AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 SMART SM00858 280 338 1.4E-11 T 14-09-2016 IPR013974 SAF domain AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 Pfam PF03102 NeuB family 29 266 2.1E-82 T 14-09-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 PANTHER PTHR23416 11 289 3.1E-86 T 14-09-2016 AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 Gene3D G3DSA:3.20.20.70 8 265 4.5E-92 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 Pfam PF08666 SAF domain 281 337 1.4E-9 T 14-09-2016 IPR013974 SAF domain AMK01_RS03965 ae9f9310292a68bfcf0c9044aa62c235 338 PANTHER PTHR23416:SF62 11 289 3.1E-86 T 14-09-2016 AMK01_RS05435 de854884e8736baebe946d61394fabf7 227 SUPERFAMILY SSF48317 12 180 2.88E-22 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS05435 de854884e8736baebe946d61394fabf7 227 Pfam PF01569 PAP2 superfamily 101 177 1.8E-15 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS05435 de854884e8736baebe946d61394fabf7 227 SMART SM00014 63 175 2.3E-11 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS05435 de854884e8736baebe946d61394fabf7 227 Gene3D G3DSA:1.20.144.10 38 176 7.0E-17 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS06470 11f7f72ecacd86e402332834918844b8 195 Gene3D G3DSA:2.60.120.600 33 191 5.2E-13 T 14-09-2016 IPR010621 Domain of unknown function DUF1214 AMK01_RS06470 11f7f72ecacd86e402332834918844b8 195 PIRSF PIRSF009471 1 194 1.1E-77 T 14-09-2016 IPR012038 Uncharacterised conserved protein UCP009471 AMK01_RS06470 11f7f72ecacd86e402332834918844b8 195 Pfam PF06742 Protein of unknown function (DUF1214) 72 171 1.0E-15 T 14-09-2016 IPR010621 Domain of unknown function DUF1214 AMK01_RS06470 11f7f72ecacd86e402332834918844b8 195 SUPERFAMILY SSF160935 38 168 2.88E-11 T 14-09-2016 AMK01_RS01110 d9471711c29263c21ba1850381d6060a 129 Gene3D G3DSA:3.40.140.10 3 126 2.1E-44 T 14-09-2016 AMK01_RS01110 d9471711c29263c21ba1850381d6060a 129 PANTHER PTHR11644 4 124 1.0E-43 T 14-09-2016 AMK01_RS01110 d9471711c29263c21ba1850381d6060a 129 SUPERFAMILY SSF53927 4 126 3.18E-41 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK01_RS01110 d9471711c29263c21ba1850381d6060a 129 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 4 126 5.7E-44 T 14-09-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AMK01_RS01110 d9471711c29263c21ba1850381d6060a 129 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 100 3.2E-11 T 14-09-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK01_RS01110 d9471711c29263c21ba1850381d6060a 129 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 92 - T 14-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK01_RS05465 b71a0fee4bb4e19295c9b5f2525e674a 110 SUPERFAMILY SSF46785 2 100 3.81E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05465 b71a0fee4bb4e19295c9b5f2525e674a 110 SMART SM00418 7 85 4.7E-17 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS05465 b71a0fee4bb4e19295c9b5f2525e674a 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.1E-8 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS05465 b71a0fee4bb4e19295c9b5f2525e674a 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 1.1E-8 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS05465 b71a0fee4bb4e19295c9b5f2525e674a 110 PANTHER PTHR33154 4 97 2.0E-19 T 14-09-2016 AMK01_RS05465 b71a0fee4bb4e19295c9b5f2525e674a 110 Gene3D G3DSA:1.10.10.10 3 105 1.5E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05465 b71a0fee4bb4e19295c9b5f2525e674a 110 Pfam PF12840 Helix-turn-helix domain 6 63 3.6E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS11780 605c04b04872d632acb638e7bdeb4054 254 SUPERFAMILY SSF51621 3 252 1.63E-81 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS11780 605c04b04872d632acb638e7bdeb4054 254 PANTHER PTHR30502:SF5 1 253 1.2E-85 T 14-09-2016 AMK01_RS11780 605c04b04872d632acb638e7bdeb4054 254 Gene3D G3DSA:3.20.20.60 4 252 1.5E-74 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS11780 605c04b04872d632acb638e7bdeb4054 254 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 252 4.2E-122 T 14-09-2016 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52|UniPathway: UPA00208 AMK01_RS11780 605c04b04872d632acb638e7bdeb4054 254 PANTHER PTHR30502 1 253 1.2E-85 T 14-09-2016 AMK01_RS11780 605c04b04872d632acb638e7bdeb4054 254 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 242 2.3E-52 T 14-09-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMK01_RS20330 f1e77c97891a9ece5cc012d704ddbfe6 106 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 6 99 9.2E-48 T 14-09-2016 IPR010951 Chorismate mutase, bacteria AMK01_RS20330 f1e77c97891a9ece5cc012d704ddbfe6 106 SUPERFAMILY SSF48600 1 93 4.27E-26 T 14-09-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMK01_RS20330 f1e77c97891a9ece5cc012d704ddbfe6 106 Gene3D G3DSA:1.20.59.10 5 92 1.6E-21 T 14-09-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMK01_RS20330 f1e77c97891a9ece5cc012d704ddbfe6 106 SMART SM00830 14 94 7.2E-25 T 14-09-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMK01_RS20330 f1e77c97891a9ece5cc012d704ddbfe6 106 Pfam PF01817 Chorismate mutase type II 14 89 3.3E-18 T 14-09-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 Gene3D G3DSA:2.40.50.100 261 286 2.1E-7 T 14-09-2016 AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 Gene3D G3DSA:2.40.50.100 347 361 2.1E-7 T 14-09-2016 AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 Gene3D G3DSA:3.40.50.300 7 240 6.0E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 SUPERFAMILY SSF52540 10 248 1.11E-87 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 Pfam PF08402 TOBE domain 282 353 1.8E-13 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 PANTHER PTHR24220:SF151 11 251 7.0E-156 T 14-09-2016 AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 SMART SM00382 34 217 5.2E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 SUPERFAMILY SSF50331 242 360 2.38E-25 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 Gene3D G3DSA:2.40.50.140 287 345 1.6E-13 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 PANTHER PTHR24220 11 251 7.0E-156 T 14-09-2016 AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 Pfam PF00005 ABC transporter 26 167 9.2E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS19745 388e115a12245af9fa68f6866921b8b2 361 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS06985 8334d6cd2788541aa5fce7393c6f871b 324 Gene3D G3DSA:3.40.50.720 2 174 3.8E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06985 8334d6cd2788541aa5fce7393c6f871b 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 244 1.8E-49 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS06985 8334d6cd2788541aa5fce7393c6f871b 324 PANTHER PTHR10366:SF466 5 313 7.2E-91 T 14-09-2016 AMK01_RS06985 8334d6cd2788541aa5fce7393c6f871b 324 PANTHER PTHR10366 5 313 7.2E-91 T 14-09-2016 AMK01_RS06985 8334d6cd2788541aa5fce7393c6f871b 324 SUPERFAMILY SSF51735 1 315 3.92E-86 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06985 8334d6cd2788541aa5fce7393c6f871b 324 Gene3D G3DSA:3.90.25.10 175 316 5.4E-30 T 14-09-2016 AMK01_RS02895 971b333c9864a91ea7cfc99deca217c2 166 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 137 2.5E-24 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS02895 971b333c9864a91ea7cfc99deca217c2 166 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-09-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AMK01_RS02895 971b333c9864a91ea7cfc99deca217c2 166 Pfam PF02082 Transcriptional regulator 1 83 1.4E-21 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS02895 971b333c9864a91ea7cfc99deca217c2 166 SUPERFAMILY SSF46785 2 137 1.73E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02895 971b333c9864a91ea7cfc99deca217c2 166 PANTHER PTHR33221 2 160 5.5E-32 T 14-09-2016 AMK01_RS02895 971b333c9864a91ea7cfc99deca217c2 166 Gene3D G3DSA:1.10.10.10 1 138 4.1E-31 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 Gene3D G3DSA:1.10.260.40 22 73 3.7E-19 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 Gene3D G3DSA:3.40.50.2300 74 194 4.2E-22 T 14-09-2016 AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 23 68 4.4E-12 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 SUPERFAMILY SSF53822 78 345 4.93E-31 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 Gene3D G3DSA:3.40.50.2300 195 332 5.3E-20 T 14-09-2016 AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 Pfam PF13377 Periplasmic binding protein-like domain 191 344 1.3E-11 T 14-09-2016 AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 SUPERFAMILY SSF47413 21 80 4.02E-15 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 SMART SM00354 21 91 3.1E-17 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS19165 640f976f24cdc2d020a3e09181d10e87 350 PANTHER PTHR30146 21 345 1.4E-52 T 14-09-2016 AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 Gene3D G3DSA:3.40.50.300 7 252 7.2E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 PANTHER PTHR19211:SF6 3 269 2.8E-171 T 14-09-2016 AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 SMART SM00382 362 530 8.2E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 SMART SM00382 29 211 5.0E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 SUPERFAMILY SSF52540 5 208 2.48E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 SUPERFAMILY SSF52540 327 514 2.59E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 Pfam PF00005 ABC transporter 355 482 1.2E-16 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 Pfam PF00005 ABC transporter 31 167 2.3E-21 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 PANTHER PTHR19211 306 526 2.8E-171 T 14-09-2016 AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 Gene3D G3DSA:3.40.50.300 334 516 1.3E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 PANTHER PTHR19211 3 269 2.8E-171 T 14-09-2016 AMK01_RS06075 b24f0f78b0d37b0824f14c19f363f72b 531 PANTHER PTHR19211:SF6 306 526 2.8E-171 T 14-09-2016 AMK01_RS06635 4b28b25c911692ade87ee1509ac1693d 312 SUPERFAMILY SSF103481 50 146 6.02E-10 T 14-09-2016 AMK01_RS06635 4b28b25c911692ade87ee1509ac1693d 312 SUPERFAMILY SSF103481 195 295 1.44E-13 T 14-09-2016 AMK01_RS06635 4b28b25c911692ade87ee1509ac1693d 312 Pfam PF00892 EamA-like transporter family 162 291 1.8E-9 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS06635 4b28b25c911692ade87ee1509ac1693d 312 Pfam PF00892 EamA-like transporter family 10 143 5.9E-11 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS06635 4b28b25c911692ade87ee1509ac1693d 312 PANTHER PTHR22911 5 307 3.3E-49 T 14-09-2016 AMK01_RS08455 343b332c5607f297e57e0eb0fee90a15 206 Pfam PF00573 Ribosomal protein L4/L1 family 16 204 2.1E-62 T 14-09-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AMK01_RS08455 343b332c5607f297e57e0eb0fee90a15 206 Gene3D G3DSA:3.40.1370.10 58 205 2.2E-53 T 14-09-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AMK01_RS08455 343b332c5607f297e57e0eb0fee90a15 206 PANTHER PTHR10746 1 204 1.1E-87 T 14-09-2016 IPR013005 50S ribosomal protein uL4 AMK01_RS08455 343b332c5607f297e57e0eb0fee90a15 206 SUPERFAMILY SSF52166 1 205 4.97E-71 T 14-09-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AMK01_RS08455 343b332c5607f297e57e0eb0fee90a15 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.868 T 14-09-2016 IPR013005 50S ribosomal protein uL4 AMK01_RS08455 343b332c5607f297e57e0eb0fee90a15 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 203 5.1E-69 T 14-09-2016 IPR013005 50S ribosomal protein uL4 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 PANTHER PTHR11262:SF3 1 105 2.6E-200 T 14-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 PANTHER PTHR11262:SF3 210 435 2.6E-200 T 14-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Gene3D G3DSA:1.10.8.60 326 435 4.7E-35 T 14-09-2016 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 SMART SM01086 327 421 9.7E-23 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Pfam PF07724 AAA domain (Cdc48 subfamily) 197 321 4.1E-36 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 435 1.3E-182 T 14-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 101 1.6E-5 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 327 397 8.0E-8 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 435 42.134 T 14-09-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 SMART SM00382 49 324 3.9E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 SUPERFAMILY SSF52540 6 433 5.87E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Gene3D G3DSA:3.40.50.300 237 323 1.4E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Gene3D G3DSA:3.40.50.300 5 110 1.4E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Gene3D G3DSA:1.10.8.10 111 166 5.7E-24 T 14-09-2016 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 Gene3D G3DSA:1.10.8.10 205 235 5.7E-24 T 14-09-2016 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 PANTHER PTHR11262 210 435 2.6E-200 T 14-09-2016 AMK01_RS00255 1c50dc4194c061fa1b190f708838cbd7 435 PANTHER PTHR11262 1 105 2.6E-200 T 14-09-2016 AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 41 54 - T 14-09-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 Gene3D G3DSA:3.40.50.1100 20 107 2.0E-9 T 14-09-2016 AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 PANTHER PTHR10314:SF30 2 364 3.9E-117 T 14-09-2016 AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 SUPERFAMILY SSF55021 335 411 1.24E-12 T 14-09-2016 AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 1.8E-18 T 14-09-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 PANTHER PTHR10314 2 364 3.9E-117 T 14-09-2016 AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 TIGRFAM TIGR02079 THD1: threonine dehydratase 5 416 8.5E-179 T 14-09-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 SUPERFAMILY SSF53686 6 357 1.44E-86 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 311 1.7E-67 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS08890 4df133eb949aec4200cd880d2a1221b9 416 Gene3D G3DSA:3.40.50.1100 108 341 3.5E-65 T 14-09-2016 AMK01_RS15290 225b2e0a8c6bf80cfca275e28d384196 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK01_RS15290 225b2e0a8c6bf80cfca275e28d384196 400 PANTHER PTHR11751 14 395 2.7E-166 T 14-09-2016 AMK01_RS15290 225b2e0a8c6bf80cfca275e28d384196 400 SUPERFAMILY SSF53383 1 396 6.8E-112 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS15290 225b2e0a8c6bf80cfca275e28d384196 400 PANTHER PTHR11751:SF306 14 395 2.7E-166 T 14-09-2016 AMK01_RS15290 225b2e0a8c6bf80cfca275e28d384196 400 Gene3D G3DSA:3.40.640.10 45 275 5.2E-72 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS15290 225b2e0a8c6bf80cfca275e28d384196 400 Pfam PF00155 Aminotransferase class I and II 32 392 4.4E-81 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS15290 225b2e0a8c6bf80cfca275e28d384196 400 Gene3D G3DSA:3.90.1150.10 276 398 1.8E-44 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 Pfam PF00384 Molybdopterin oxidoreductase 97 509 2.1E-46 T 14-09-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 SUPERFAMILY SSF53706 39 579 1.3E-136 T 14-09-2016 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 Gene3D G3DSA:2.20.25.90 38 97 5.5E-13 T 14-09-2016 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 SUPERFAMILY SSF50692 607 731 4.97E-28 T 14-09-2016 IPR009010 Aspartate decarboxylase-like domain AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 SMART SM00926 38 94 5.8E-15 T 14-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 Pfam PF01568 Molydopterin dinucleotide binding domain 616 719 4.2E-19 T 14-09-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 3.0E-8 T 14-09-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 Gene3D G3DSA:2.40.40.20 598 731 8.8E-29 T 14-09-2016 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 653 680 - T 14-09-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 Gene3D G3DSA:3.40.228.10 205 368 1.3E-46 T 14-09-2016 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 PANTHER PTHR11615 1 731 1.5E-191 T 14-09-2016 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 Gene3D G3DSA:3.40.50.740 394 514 2.7E-44 T 14-09-2016 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 Gene3D G3DSA:3.40.50.740 98 204 2.7E-44 T 14-09-2016 AMK01_RS07560 08b078d027cb644c285c778b159b7e78 734 PANTHER PTHR11615:SF127 1 731 1.5E-191 T 14-09-2016 AMK01_RS19730 1341c2eace979fe7de093d14711bb598 96 Gene3D G3DSA:3.90.850.10 44 85 3.0E-4 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS19730 1341c2eace979fe7de093d14711bb598 96 Pfam PF04972 BON domain 23 85 7.0E-13 T 14-09-2016 IPR007055 BON domain AMK01_RS09850 5952772991054b1f9b5f593020f6032f 166 PANTHER PTHR13939 3 164 1.3E-53 T 14-09-2016 AMK01_RS09850 5952772991054b1f9b5f593020f6032f 166 Gene3D G3DSA:3.90.950.20 3 164 1.7E-52 T 14-09-2016 IPR008136 CinA, C-terminal AMK01_RS09850 5952772991054b1f9b5f593020f6032f 166 SUPERFAMILY SSF142433 3 164 3.66E-52 T 14-09-2016 IPR008136 CinA, C-terminal AMK01_RS09850 5952772991054b1f9b5f593020f6032f 166 Pfam PF02464 Competence-damaged protein 10 163 1.8E-50 T 14-09-2016 IPR008136 CinA, C-terminal AMK01_RS09850 5952772991054b1f9b5f593020f6032f 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 19 160 2.9E-43 T 14-09-2016 IPR008136 CinA, C-terminal AMK01_RS06685 03b78ecd0101ac8af59d15a6205488c0 204 Pfam PF03734 L,D-transpeptidase catalytic domain 67 201 5.8E-16 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS06685 03b78ecd0101ac8af59d15a6205488c0 204 PANTHER PTHR30582:SF1 50 203 4.7E-55 T 14-09-2016 AMK01_RS06685 03b78ecd0101ac8af59d15a6205488c0 204 Gene3D G3DSA:2.40.440.10 62 202 6.5E-35 T 14-09-2016 AMK01_RS06685 03b78ecd0101ac8af59d15a6205488c0 204 PANTHER PTHR30582 50 203 4.7E-55 T 14-09-2016 AMK01_RS06685 03b78ecd0101ac8af59d15a6205488c0 204 SUPERFAMILY SSF141523 61 113 8.24E-32 T 14-09-2016 AMK01_RS06685 03b78ecd0101ac8af59d15a6205488c0 204 SUPERFAMILY SSF141523 140 202 8.24E-32 T 14-09-2016 AMK01_RS13410 f997ef96a717c7e9db3ff40d0edd6759 335 SUPERFAMILY SSF46689 284 333 1.7E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13410 f997ef96a717c7e9db3ff40d0edd6759 335 Pfam PF12833 Helix-turn-helix domain 254 333 5.0E-20 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS13410 f997ef96a717c7e9db3ff40d0edd6759 335 Gene3D G3DSA:1.10.10.60 284 334 2.4E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13410 f997ef96a717c7e9db3ff40d0edd6759 335 PANTHER PTHR11019:SF65 213 335 5.4E-22 T 14-09-2016 AMK01_RS13410 f997ef96a717c7e9db3ff40d0edd6759 335 PANTHER PTHR11019:SF65 1 13 5.4E-22 T 14-09-2016 AMK01_RS13410 f997ef96a717c7e9db3ff40d0edd6759 335 PANTHER PTHR11019 1 13 5.4E-22 T 14-09-2016 AMK01_RS13410 f997ef96a717c7e9db3ff40d0edd6759 335 PANTHER PTHR11019 213 335 5.4E-22 T 14-09-2016 AMK01_RS13410 f997ef96a717c7e9db3ff40d0edd6759 335 SMART SM00342 248 331 5.7E-17 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS12820 752d65d842ad19c904e9593916218654 345 Pfam PF11168 Protein of unknown function (DUF2955) 12 148 2.2E-10 T 14-09-2016 IPR022604 Protein of unknown function DUF2955 AMK01_RS07375 ad595f0382bcde7c534f813d8efe9ed1 347 PANTHER PTHR11732:SF112 1 132 3.9E-140 T 14-09-2016 AMK01_RS07375 ad595f0382bcde7c534f813d8efe9ed1 347 PANTHER PTHR11732:SF112 159 345 3.9E-140 T 14-09-2016 AMK01_RS07375 ad595f0382bcde7c534f813d8efe9ed1 347 Pfam PF00248 Aldo/keto reductase family 15 339 1.0E-69 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS07375 ad595f0382bcde7c534f813d8efe9ed1 347 SUPERFAMILY SSF51430 1 345 4.85E-100 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS07375 ad595f0382bcde7c534f813d8efe9ed1 347 Gene3D G3DSA:3.20.20.100 1 344 1.4E-100 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS07375 ad595f0382bcde7c534f813d8efe9ed1 347 PANTHER PTHR11732 1 132 3.9E-140 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS07375 ad595f0382bcde7c534f813d8efe9ed1 347 PANTHER PTHR11732 159 345 3.9E-140 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 PANTHER PTHR32089:SF63 189 253 2.5E-104 T 14-09-2016 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 PANTHER PTHR32089:SF63 334 602 2.5E-104 T 14-09-2016 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 SMART SM00283 352 599 6.0E-92 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 Gene3D G3DSA:1.10.287.950 368 571 2.9E-54 T 14-09-2016 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 SUPERFAMILY SSF58104 319 601 1.57E-64 T 14-09-2016 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 SMART SM00304 218 271 2.1E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 SUPERFAMILY SSF103190 94 185 2.63E-9 T 14-09-2016 IPR029151 Periplasmic sensor domain-like AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 SUPERFAMILY SSF158472 219 267 4.32E-6 T 14-09-2016 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 Pfam PF17201 Cache 3/Cache 2 fusion domain 62 192 6.4E-34 T 14-09-2016 IPR033462 Cache 3/Cache 2 fusion domain AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 Pfam PF00672 HAMP domain 199 267 6.6E-12 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 PANTHER PTHR32089 189 253 2.5E-104 T 14-09-2016 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 PANTHER PTHR32089 334 602 2.5E-104 T 14-09-2016 AMK01_RS03750 f3109c964f1961dfddeae9acff182e53 615 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 415 598 9.3E-55 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS18815 0dfd7f2f80dbec1c0d7f15fb273714e7 350 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 9.5E-39 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS18815 0dfd7f2f80dbec1c0d7f15fb273714e7 350 Gene3D G3DSA:3.20.20.150 10 323 5.2E-70 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS18815 0dfd7f2f80dbec1c0d7f15fb273714e7 350 PANTHER PTHR12110:SF17 99 342 2.6E-25 T 14-09-2016 AMK01_RS18815 0dfd7f2f80dbec1c0d7f15fb273714e7 350 PANTHER PTHR12110:SF17 23 80 2.6E-25 T 14-09-2016 AMK01_RS18815 0dfd7f2f80dbec1c0d7f15fb273714e7 350 PANTHER PTHR12110 99 342 2.6E-25 T 14-09-2016 AMK01_RS18815 0dfd7f2f80dbec1c0d7f15fb273714e7 350 PANTHER PTHR12110 23 80 2.6E-25 T 14-09-2016 AMK01_RS18815 0dfd7f2f80dbec1c0d7f15fb273714e7 350 SUPERFAMILY SSF51658 8 322 4.15E-62 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS18815 0dfd7f2f80dbec1c0d7f15fb273714e7 350 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 1.7E-19 T 14-09-2016 IPR011418 AP endonuclease, family 2, C-terminal AMK01_RS03160 c224a1c6a79111d7287553a92f56efea 295 Hamap MF_00697 UPF0276 protein . 15 288 45.722 T 14-09-2016 IPR007801 Uncharacterised protein family UPF0276 AMK01_RS03160 c224a1c6a79111d7287553a92f56efea 295 PANTHER PTHR42194:SF1 9 283 7.2E-62 T 14-09-2016 AMK01_RS03160 c224a1c6a79111d7287553a92f56efea 295 PANTHER PTHR42194 9 283 7.2E-62 T 14-09-2016 AMK01_RS03160 c224a1c6a79111d7287553a92f56efea 295 SUPERFAMILY SSF51658 38 229 6.21E-8 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS03160 c224a1c6a79111d7287553a92f56efea 295 Gene3D G3DSA:3.20.20.150 12 282 2.0E-103 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS03160 c224a1c6a79111d7287553a92f56efea 295 Pfam PF05114 Protein of unknown function (DUF692) 15 280 1.1E-105 T 14-09-2016 IPR007801 Uncharacterised protein family UPF0276 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 SUPERFAMILY SSF50156 444 508 6.7E-11 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 Pfam PF13180 PDZ domain 323 414 4.4E-17 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 Pfam PF13180 PDZ domain 446 510 2.6E-8 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 Gene3D G3DSA:2.30.42.10 326 421 2.8E-28 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 PANTHER PTHR22939 148 437 8.2E-107 T 14-09-2016 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 Gene3D G3DSA:2.30.42.10 449 509 1.1E-10 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 Gene3D G3DSA:2.40.10.10 214 325 8.5E-44 T 14-09-2016 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 SUPERFAMILY SSF50156 306 414 9.86E-23 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 Gene3D G3DSA:2.40.10.10 52 208 1.5E-33 T 14-09-2016 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 Pfam PF13365 Trypsin-like peptidase domain 149 284 4.0E-32 T 14-09-2016 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 PRINTS PR00834 HtrA/DegQ protease family signature 179 199 3.7E-58 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 PRINTS PR00834 HtrA/DegQ protease family signature 255 272 3.7E-58 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 PRINTS PR00834 HtrA/DegQ protease family signature 277 294 3.7E-58 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 PRINTS PR00834 HtrA/DegQ protease family signature 158 170 3.7E-58 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 PRINTS PR00834 HtrA/DegQ protease family signature 221 245 3.7E-58 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 PRINTS PR00834 HtrA/DegQ protease family signature 363 375 3.7E-58 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 SMART SM00228 323 405 2.6E-12 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 SMART SM00228 446 520 2.4E-6 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 PANTHER PTHR22939:SF79 148 437 8.2E-107 T 14-09-2016 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 52 525 5.8E-137 T 14-09-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 SUPERFAMILY SSF50494 43 72 2.06E-59 T 14-09-2016 IPR009003 Peptidase S1, PA clan AMK01_RS06605 e872bb0e4e60418b13bf3adf967ee502 533 SUPERFAMILY SSF50494 145 333 2.06E-59 T 14-09-2016 IPR009003 Peptidase S1, PA clan AMK01_RS17045 555655ef06871944c2848eb4d187e19e 541 PANTHER PTHR11795:SF349 99 540 2.6E-162 T 14-09-2016 AMK01_RS17045 555655ef06871944c2848eb4d187e19e 541 PANTHER PTHR11795 99 540 2.6E-162 T 14-09-2016 AMK01_RS17045 555655ef06871944c2848eb4d187e19e 541 Pfam PF02653 Branched-chain amino acid transport system / permease component 251 523 1.8E-53 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS17045 555655ef06871944c2848eb4d187e19e 541 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 247 537 4.4E-130 T 14-09-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 Gene3D G3DSA:3.40.50.720 11 281 7.7E-98 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 Gene3D G3DSA:1.10.1040.10 284 478 4.0E-56 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 PANTHER PTHR30562 18 481 1.2E-141 T 14-09-2016 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 PANTHER PTHR30562:SF6 18 481 1.2E-141 T 14-09-2016 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 SUPERFAMILY SSF51735 10 276 2.48E-87 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 432 4.6E-68 T 14-09-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 SUPERFAMILY SSF48179 285 480 1.22E-49 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 28 188 3.5E-33 T 14-09-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 14-09-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 8.9E-17 T 14-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 8.9E-17 T 14-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 8.9E-17 T 14-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS00460 2e2061c300c43650c0ad4ec416e4565a 485 PRINTS PR00084 Mannitol dehydrogenase signature 29 39 8.9E-17 T 14-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS08400 a552f03b86c04c8767f299b0986ebc9d 172 SUPERFAMILY SSF160369 3 168 2.62E-52 T 14-09-2016 AMK01_RS08400 a552f03b86c04c8767f299b0986ebc9d 172 Pfam PF00466 Ribosomal protein L10 3 98 2.8E-25 T 14-09-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AMK01_RS08400 a552f03b86c04c8767f299b0986ebc9d 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 4 141 2.0E-6 T 14-09-2016 AMK01_RS08400 a552f03b86c04c8767f299b0986ebc9d 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.306 T 14-09-2016 IPR022973 Ribosomal protein L10 AMK01_RS08400 a552f03b86c04c8767f299b0986ebc9d 172 PANTHER PTHR11560 1 170 3.5E-50 T 14-09-2016 AMK01_RS01685 cf2119a73417a3e314e1ffc48020e1bf 358 SUPERFAMILY SSF56112 39 149 1.4E-5 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS01685 cf2119a73417a3e314e1ffc48020e1bf 358 Gene3D G3DSA:3.90.1200.10 24 174 5.9E-5 T 14-09-2016 AMK01_RS01685 cf2119a73417a3e314e1ffc48020e1bf 358 PANTHER PTHR39441 1 132 3.3E-14 T 14-09-2016 AMK01_RS01685 cf2119a73417a3e314e1ffc48020e1bf 358 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 26 122 1.1E-21 T 14-09-2016 IPR018721 Protein of unknown function DUF2252 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 254 1.3E-21 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 224 1.3E-21 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 105 119 1.3E-21 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 270 285 1.3E-21 T 14-09-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 PANTHER PTHR22573 1 540 2.4E-264 T 14-09-2016 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 Gene3D G3DSA:3.40.120.10 196 282 6.5E-34 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 PANTHER PTHR22573:SF2 1 540 2.4E-264 T 14-09-2016 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 184 286 2.9E-13 T 14-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 106 115 - T 14-09-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 SUPERFAMILY SSF53738 278 414 2.04E-36 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 13 152 1.6E-38 T 14-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 Gene3D G3DSA:3.30.310.50 401 543 4.8E-64 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 294 407 1.3E-31 T 14-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 SUPERFAMILY SSF53738 3 211 2.59E-49 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 SUPERFAMILY SSF53738 182 291 2.79E-29 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 463 516 7.7E-7 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 Gene3D G3DSA:3.40.120.10 2 195 7.4E-64 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 Gene3D G3DSA:3.40.120.10 283 400 1.9E-43 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS18555 9736c98570653a5b09a1062663340ea8 543 SUPERFAMILY SSF55957 409 543 7.59E-48 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 9 346 1.8E-140 T 14-09-2016 IPR010213 Transcription termination factor NusA GO:0003723 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 SUPERFAMILY SSF47794 357 418 1.49E-15 T 14-09-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Gene3D G3DSA:3.30.1480.10 8 130 1.5E-47 T 14-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Gene3D G3DSA:1.10.150.20 435 507 8.4E-14 T 14-09-2016 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 SMART SM00322 234 307 1.2 T 14-09-2016 IPR004087 K Homology domain GO:0003676 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 SMART SM00322 308 419 0.032 T 14-09-2016 IPR004087 K Homology domain GO:0003676 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 SUPERFAMILY SSF69705 8 130 3.53E-38 T 14-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Pfam PF08529 NusA N-terminal domain 9 129 2.4E-34 T 14-09-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 SMART SM00316 138 204 1.3E-11 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Gene3D G3DSA:3.30.300.20 203 281 1.3E-36 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Gene3D G3DSA:2.40.50.140 133 202 1.5E-29 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Pfam PF14520 Helix-hairpin-helix domain 377 416 9.7E-5 T 14-09-2016 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Pfam PF00575 S1 RNA binding domain 136 198 5.4E-8 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Pfam PF13184 NusA-like KH domain 234 300 1.6E-28 T 14-09-2016 IPR025249 KH domain, NusA-like GO:0003723 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 PANTHER PTHR22648:SF0 6 452 1.1E-176 T 14-09-2016 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Gene3D G3DSA:1.10.150.20 358 422 6.1E-20 T 14-09-2016 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 PANTHER PTHR22648 6 452 1.1E-176 T 14-09-2016 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 SUPERFAMILY SSF50249 136 203 5.58E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 1.0E-18 T 14-09-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Gene3D G3DSA:3.30.300.20 282 350 1.7E-33 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 7 414 31.028 T 14-09-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 SUPERFAMILY SSF54814 283 346 3.2E-17 T 14-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK01_RS00740 f9614bd53fcede13a1358bc41318d2d9 533 SUPERFAMILY SSF54814 204 281 1.9E-31 T 14-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 PANTHER PTHR30314 12 318 2.9E-165 T 14-09-2016 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 14-09-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 SMART SM00864 14 206 2.6E-104 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 PANTHER PTHR30314:SF3 12 318 2.9E-165 T 14-09-2016 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 Pfam PF12327 FtsZ family, C-terminal domain 223 318 2.7E-36 T 14-09-2016 IPR024757 Cell division protein FtsZ, C-terminal AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 14-09-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 13 325 2.0E-120 T 14-09-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 SUPERFAMILY SSF52490 14 209 7.2E-66 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 340 36.208 T 14-09-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 Gene3D G3DSA:3.40.50.1440 14 215 1.5E-91 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 SUPERFAMILY SSF55307 206 320 3.66E-41 T 14-09-2016 IPR008280 Tubulin/FtsZ, C-terminal AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 SMART SM00865 208 326 1.0E-52 T 14-09-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 PRINTS PR00423 Cell division protein FtsZ signature 127 148 4.1E-48 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 PRINTS PR00423 Cell division protein FtsZ signature 190 212 4.1E-48 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 PRINTS PR00423 Cell division protein FtsZ signature 213 234 4.1E-48 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 PRINTS PR00423 Cell division protein FtsZ signature 99 119 4.1E-48 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 174 1.6E-41 T 14-09-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK01_RS13485 524d17cdf18ca9228b5259049728a3de 340 Gene3D G3DSA:3.30.1330.20 216 320 3.8E-47 T 14-09-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMK01_RS18170 8f5f4e19a814d5987b0cc20cdd429861 169 PANTHER PTHR22617 18 169 9.3E-28 T 14-09-2016 AMK01_RS18170 8f5f4e19a814d5987b0cc20cdd429861 169 Pfam PF01584 CheW-like domain 21 159 3.6E-25 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS18170 8f5f4e19a814d5987b0cc20cdd429861 169 Gene3D G3DSA:2.40.50.180 60 97 6.0E-7 T 14-09-2016 AMK01_RS18170 8f5f4e19a814d5987b0cc20cdd429861 169 SUPERFAMILY SSF50341 18 160 6.41E-28 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS18170 8f5f4e19a814d5987b0cc20cdd429861 169 SMART SM00260 17 158 4.1E-28 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 Gene3D G3DSA:3.40.50.2300 63 181 6.9E-34 T 14-09-2016 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 SUPERFAMILY SSF53822 70 334 1.57E-61 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 Gene3D G3DSA:1.10.260.40 11 62 2.8E-22 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 PANTHER PTHR30146 10 333 8.6E-96 T 14-09-2016 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 Pfam PF13377 Periplasmic binding protein-like domain 178 333 2.7E-32 T 14-09-2016 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 Gene3D G3DSA:3.40.50.2300 182 314 1.1E-39 T 14-09-2016 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 SUPERFAMILY SSF47413 10 68 1.27E-16 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 SMART SM00354 10 80 1.2E-24 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS19770 943638111e0834f30f53c4f5ec15d6ea 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 1.4E-15 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS00415 0e90a58558cf824a5cb36033e1bebd58 382 PANTHER PTHR22604:SF139 48 381 3.4E-143 T 14-09-2016 AMK01_RS00415 0e90a58558cf824a5cb36033e1bebd58 382 SUPERFAMILY SSF51735 48 171 3.74E-26 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00415 0e90a58558cf824a5cb36033e1bebd58 382 Gene3D G3DSA:3.30.360.10 157 373 2.8E-39 T 14-09-2016 AMK01_RS00415 0e90a58558cf824a5cb36033e1bebd58 382 SUPERFAMILY SSF55347 144 345 6.05E-32 T 14-09-2016 AMK01_RS00415 0e90a58558cf824a5cb36033e1bebd58 382 Gene3D G3DSA:3.40.50.720 48 156 1.1E-23 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00415 0e90a58558cf824a5cb36033e1bebd58 382 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 48 135 1.0E-7 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS00415 0e90a58558cf824a5cb36033e1bebd58 382 PANTHER PTHR22604 48 381 3.4E-143 T 14-09-2016 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 SUPERFAMILY SSF56752 19 361 4.97E-111 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 52 361 3.3E-125 T 14-09-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 PANTHER PTHR11825:SF2 9 363 1.1E-141 T 14-09-2016 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 Gene3D G3DSA:3.30.470.10 26 181 5.1E-72 T 14-09-2016 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 Gene3D G3DSA:3.20.10.10 182 350 2.9E-63 T 14-09-2016 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 PIRSF PIRSF006468 8 366 5.7E-131 T 14-09-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 Pfam PF01063 Amino-transferase class IV 78 318 1.3E-34 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 ProSitePatterns PS00770 Aminotransferases class-IV signature. 240 270 - T 14-09-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS14015 6fba23e97e14c7b58209db832c29f7b8 366 PANTHER PTHR11825 9 363 1.1E-141 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS04050 ad23682e4bc6e7eac3286fee815ea222 239 PANTHER PTHR10920 21 231 1.4E-93 T 14-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AMK01_RS04050 ad23682e4bc6e7eac3286fee815ea222 239 PIRSF PIRSF005461 15 239 5.9E-70 T 14-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AMK01_RS04050 ad23682e4bc6e7eac3286fee815ea222 239 SUPERFAMILY SSF53335 22 229 1.71E-36 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04050 ad23682e4bc6e7eac3286fee815ea222 239 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 29 227 29.851 T 14-09-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AMK01_RS04050 ad23682e4bc6e7eac3286fee815ea222 239 Gene3D G3DSA:3.40.50.150 12 230 1.9E-68 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04050 ad23682e4bc6e7eac3286fee815ea222 239 Pfam PF01728 FtsJ-like methyltransferase 49 227 7.0E-52 T 14-09-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 14-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 235 251 - T 14-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 Gene3D G3DSA:3.40.50.720 6 117 1.0E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 Gene3D G3DSA:3.40.50.720 118 301 5.1E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 SUPERFAMILY SSF52283 6 141 1.19E-34 T 14-09-2016 AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 SUPERFAMILY SSF51735 106 299 2.68E-56 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 329 1.2E-31 T 14-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 PANTHER PTHR10996 1 330 4.5E-119 T 14-09-2016 AMK01_RS00845 43ca40b84d4ef3dd4b4f2e3fc8c195e4 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 298 4.2E-55 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK01_RS10780 d32b400cae4d927bce9e82ee78c54200 109 SMART SM00992 5 104 9.7E-55 T 14-09-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMK01_RS10780 d32b400cae4d927bce9e82ee78c54200 109 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 6 96 9.0E-27 T 14-09-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMK01_RS10780 d32b400cae4d927bce9e82ee78c54200 109 PANTHER PTHR31350 1 105 4.4E-40 T 14-09-2016 AMK01_RS10780 d32b400cae4d927bce9e82ee78c54200 109 PANTHER PTHR31350:SF6 1 105 4.4E-40 T 14-09-2016 AMK01_RS10780 d32b400cae4d927bce9e82ee78c54200 109 SUPERFAMILY SSF141255 6 96 2.35E-34 T 14-09-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMK01_RS10780 d32b400cae4d927bce9e82ee78c54200 109 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 6 104 7.4E-41 T 14-09-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 25.092 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 Pfam PF00467 KOW motif 126 156 4.6E-6 T 14-09-2016 IPR005824 KOW AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.6E-67 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 SMART SM00738 2 110 2.3E-48 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 Gene3D G3DSA:3.30.70.940 3 113 8.7E-43 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 SUPERFAMILY SSF82679 4 112 2.49E-38 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 PANTHER PTHR30265 4 176 8.2E-72 T 14-09-2016 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.2E-19 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 1.2E-19 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 1.2E-19 T 14-09-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 SMART SM00739 122 149 3.8E-5 T 14-09-2016 IPR005824 KOW AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 Gene3D G3DSA:2.30.30.30 115 176 9.6E-30 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 SUPERFAMILY SSF50104 120 176 1.2E-18 T 14-09-2016 IPR008991 Translation protein SH3-like domain AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 Pfam PF02357 Transcription termination factor nusG 4 107 1.0E-25 T 14-09-2016 IPR006645 NusG, N-terminal GO:0006355 AMK01_RS08385 8664fe4fb0a62c0b2bf4d2d755813f36 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 14-09-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMK01_RS13775 3d1dce8d7a0b1b64c12984b2d72fb52b 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 134 7.4E-27 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS13775 3d1dce8d7a0b1b64c12984b2d72fb52b 148 PANTHER PTHR13009 15 137 1.9E-23 T 14-09-2016 AMK01_RS13775 3d1dce8d7a0b1b64c12984b2d72fb52b 148 SUPERFAMILY SSF55961 2 142 7.34E-37 T 14-09-2016 AMK01_RS13775 3d1dce8d7a0b1b64c12984b2d72fb52b 148 Gene3D G3DSA:3.30.530.20 3 141 1.2E-32 T 14-09-2016 IPR023393 START-like domain AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 SUPERFAMILY SSF54980 358 432 2.23E-9 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 Gene3D G3DSA:3.40.50.300 39 249 6.6E-23 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 SMART SM00889 433 550 4.1E-56 T 14-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 SUPERFAMILY SSF52540 1 249 2.86E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 SUPERFAMILY SSF54211 435 548 9.61E-36 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 Pfam PF00009 Elongation factor Tu GTP binding domain 51 248 1.6E-7 T 14-09-2016 AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 SMART SM00838 552 642 2.0E-4 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 Gene3D G3DSA:3.30.70.240 552 637 1.4E-11 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 Gene3D G3DSA:3.30.70.870 358 432 3.6E-10 T 14-09-2016 AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 Gene3D G3DSA:3.30.230.10 437 551 4.1E-42 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 SUPERFAMILY SSF54980 552 643 8.15E-13 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 PANTHER PTHR23115:SF98 223 646 5.4E-97 T 14-09-2016 AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 PANTHER PTHR23115:SF98 52 149 5.4E-97 T 14-09-2016 AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 Pfam PF03764 Elongation factor G, domain IV 435 548 4.6E-39 T 14-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 PANTHER PTHR23115 52 149 5.4E-97 T 14-09-2016 AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 Pfam PF00679 Elongation factor G C-terminus 552 640 3.8E-16 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS05425 be2db9c85a7e5b8171caa6bde3af2dd9 653 PANTHER PTHR23115 223 646 5.4E-97 T 14-09-2016 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 Gene3D G3DSA:1.10.3720.10 200 409 1.7E-29 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 Gene3D G3DSA:1.10.3720.10 87 156 2.3E-11 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 88 146 4.3E-12 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 PANTHER PTHR30085:SF1 274 416 1.4E-88 T 14-09-2016 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 247 411 1.5E-11 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 PANTHER PTHR30085 274 416 1.4E-88 T 14-09-2016 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 SUPERFAMILY SSF161098 203 395 2.83E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 PANTHER PTHR30085 13 183 1.4E-88 T 14-09-2016 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 SUPERFAMILY SSF161098 89 155 1.83E-10 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09920 9fcd51a4e224bda72979d430979d4881 416 PANTHER PTHR30085:SF1 13 183 1.4E-88 T 14-09-2016 AMK01_RS09440 a9c1b367c407d78a340470c353296631 132 PANTHER PTHR12910:SF3 1 130 9.0E-34 T 14-09-2016 AMK01_RS09440 a9c1b367c407d78a340470c353296631 132 PANTHER PTHR12910 1 130 9.0E-34 T 14-09-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 AMK01_RS09440 a9c1b367c407d78a340470c353296631 132 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 27 130 1.0E-26 T 14-09-2016 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 SUPERFAMILY SSF56327 144 311 6.77E-56 T 14-09-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 1.8E-37 T 14-09-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 SUPERFAMILY SSF51735 5 144 2.49E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 PANTHER PTHR11540 1 316 2.8E-144 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 41.634 T 14-09-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 Gene3D G3DSA:3.90.110.10 145 313 1.6E-60 T 14-09-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 309 1.6E-126 T 14-09-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 303 1.9E-30 T 14-09-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 PIRSF PIRSF000102 1 314 1.8E-101 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 7.2E-27 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 7.2E-27 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 7.2E-27 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 7.2E-27 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 7.2E-27 T 14-09-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 PANTHER PTHR11540:SF16 1 316 2.8E-144 T 14-09-2016 AMK01_RS20010 b7f0f04b7f3c0644fce602ba715a47ec 320 Gene3D G3DSA:3.40.50.720 2 144 4.0E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 PANTHER PTHR11695 266 334 5.8E-102 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 2.3E-12 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 Pfam PF13602 Zinc-binding dehydrogenase 187 330 7.9E-37 T 14-09-2016 AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 Gene3D G3DSA:3.40.50.720 111 307 9.0E-48 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 SUPERFAMILY SSF50129 2 150 1.03E-37 T 14-09-2016 IPR011032 GroES-like AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 SMART SM00829 13 330 6.9E-36 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 PANTHER PTHR11695 15 249 5.8E-102 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 PANTHER PTHR11695:SF294 15 249 5.8E-102 T 14-09-2016 AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 SUPERFAMILY SSF51735 117 297 2.1E-40 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 PANTHER PTHR11695:SF294 266 334 5.8E-102 T 14-09-2016 AMK01_RS02495 4086af2fc89afe177b56f275ac810d39 334 Gene3D G3DSA:3.90.180.10 2 91 8.0E-20 T 14-09-2016 IPR011032 GroES-like AMK01_RS14760 4189327802a50a3e8992c357d8487365 316 PANTHER PTHR11614:SF87 12 303 1.9E-30 T 14-09-2016 AMK01_RS14760 4189327802a50a3e8992c357d8487365 316 SUPERFAMILY SSF53474 10 305 1.16E-36 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS14760 4189327802a50a3e8992c357d8487365 316 PANTHER PTHR11614 12 303 1.9E-30 T 14-09-2016 AMK01_RS14760 4189327802a50a3e8992c357d8487365 316 Pfam PF12146 Serine aminopeptidase, S33 25 288 1.3E-50 T 14-09-2016 IPR022742 Serine aminopeptidase, S33 AMK01_RS14760 4189327802a50a3e8992c357d8487365 316 Gene3D G3DSA:3.40.50.1820 180 307 1.3E-50 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS14760 4189327802a50a3e8992c357d8487365 316 Gene3D G3DSA:3.40.50.1820 5 143 1.3E-50 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 PANTHER PTHR24423:SF534 202 492 9.7E-56 T 14-09-2016 AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 Pfam PF00672 HAMP domain 189 259 4.8E-8 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 3.5E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 469 3.5E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 488 3.5E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 PANTHER PTHR24423 202 492 9.7E-56 T 14-09-2016 AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 SMART SM00387 376 491 2.6E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 489 7.9E-19 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 SMART SM00304 208 263 0.0022 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 Gene3D G3DSA:3.30.565.10 338 488 7.9E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02385 8d19a01e3bb0d060890925a4f2b5a13a 505 SUPERFAMILY SSF55874 331 489 3.93E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS19765 5119b3810a93639732125c792f265acc 412 Pfam PF13416 Bacterial extracellular solute-binding protein 40 341 1.5E-34 T 14-09-2016 AMK01_RS19765 5119b3810a93639732125c792f265acc 412 Gene3D G3DSA:3.40.190.10 25 162 4.6E-20 T 14-09-2016 AMK01_RS19765 5119b3810a93639732125c792f265acc 412 SUPERFAMILY SSF53850 27 404 4.98E-70 T 14-09-2016 AMK01_RS19765 5119b3810a93639732125c792f265acc 412 PANTHER PTHR30061 1 409 1.5E-64 T 14-09-2016 AMK01_RS19765 5119b3810a93639732125c792f265acc 412 Gene3D G3DSA:3.40.190.10 163 345 2.9E-27 T 14-09-2016 AMK01_RS07710 19897de521a771ea42ce263a65a7075b 167 PANTHER PTHR35848:SF1 1 157 4.3E-24 T 14-09-2016 AMK01_RS07710 19897de521a771ea42ce263a65a7075b 167 Gene3D G3DSA:2.60.120.10 35 124 2.9E-23 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS07710 19897de521a771ea42ce263a65a7075b 167 SUPERFAMILY SSF51182 7 135 5.4E-22 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS07710 19897de521a771ea42ce263a65a7075b 167 Pfam PF07883 Cupin domain 47 115 1.4E-17 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS07710 19897de521a771ea42ce263a65a7075b 167 PANTHER PTHR35848 1 157 4.3E-24 T 14-09-2016 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 SUPERFAMILY SSF52540 48 242 3.53E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 Gene3D G3DSA:1.10.8.60 187 262 1.6E-29 T 14-09-2016 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 PANTHER PTHR11669 416 468 2.7E-158 T 14-09-2016 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 SUPERFAMILY SSF48019 263 388 2.21E-28 T 14-09-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 PANTHER PTHR11669:SF0 4 393 2.7E-158 T 14-09-2016 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 SMART SM00382 53 199 1.7E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 PANTHER PTHR11669:SF0 416 468 2.7E-158 T 14-09-2016 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 475 587 1.7E-38 T 14-09-2016 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 18 378 2.2E-122 T 14-09-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 Gene3D G3DSA:3.40.50.300 34 186 1.6E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 PANTHER PTHR11669 4 393 2.7E-158 T 14-09-2016 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 Pfam PF13177 DNA polymerase III, delta subunit 36 198 4.8E-34 T 14-09-2016 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 252 394 7.2E-51 T 14-09-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AMK01_RS00780 87ed3673d7de52da7cc9146025774a0d 621 Gene3D G3DSA:1.20.272.10 263 380 2.4E-21 T 14-09-2016 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 Pfam PF01220 Dehydroquinase class II 5 140 4.4E-60 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 Gene3D G3DSA:3.40.50.9100 2 142 7.3E-65 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 145 70.019 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 143 4.1E-61 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 PANTHER PTHR21272 1 140 2.1E-88 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 142 5.0E-64 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 SUPERFAMILY SSF52304 4 143 1.44E-60 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 PIRSF PIRSF001399 1 145 1.1E-64 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS09470 7197c7fe7a538f2ca06ba1381d8f8e7b 145 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 14-09-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS10420 1990a2491e0696fa285d72788125a38a 138 SUPERFAMILY SSF143744 2 131 1.28E-34 T 14-09-2016 AMK01_RS10420 1990a2491e0696fa285d72788125a38a 138 PANTHER PTHR34309:SF1 2 130 9.6E-31 T 14-09-2016 AMK01_RS10420 1990a2491e0696fa285d72788125a38a 138 PANTHER PTHR34309 2 130 9.6E-31 T 14-09-2016 AMK01_RS10420 1990a2491e0696fa285d72788125a38a 138 Pfam PF03928 Haem-degrading 2 128 2.1E-30 T 14-09-2016 IPR005624 Haem-degrading AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 SUPERFAMILY SSF160996 190 339 2.75E-35 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PANTHER PTHR10617:SF103 329 391 9.2E-112 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PANTHER PTHR10617:SF103 5 286 9.2E-112 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.0E-9 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.0E-9 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 4.0E-9 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 Gene3D G3DSA:1.10.8.260 269 318 7.1E-14 T 14-09-2016 IPR023166 HI0933 insert-like domain AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PANTHER PTHR10617 329 391 9.2E-112 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 Gene3D G3DSA:3.50.50.60 338 391 6.0E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 Gene3D G3DSA:3.50.50.60 4 187 6.0E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.8E-11 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 3.8E-11 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 3.8E-11 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 390 6.3E-118 T 14-09-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 Gene3D G3DSA:2.40.30.10 189 268 7.9E-23 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 PANTHER PTHR10617 5 286 9.2E-112 T 14-09-2016 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 SUPERFAMILY SSF51905 4 189 2.73E-58 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 SUPERFAMILY SSF51905 336 392 2.73E-58 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03740 24c872b31244a8a801c4d6f9b5b0e72a 393 Pfam PF03486 HI0933-like protein 6 391 2.7E-141 T 14-09-2016 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 PANTHER PTHR30071 14 229 2.8E-75 T 14-09-2016 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 105 125 5.1E-57 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 209 233 5.1E-57 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 126 146 5.1E-57 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 67 87 5.1E-57 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 50 67 5.1E-57 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 161 187 5.1E-57 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 Pfam PF01578 Cytochrome C assembly protein 15 189 3.0E-34 T 14-09-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMK01_RS20280 c769f9f74fc8ba9e653e0efa44145948 253 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 52 233 3.4E-83 T 14-09-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS09380 27658e1ebf8b130a3fa02a4b0aa3a716 493 Pfam PF01425 Amidase 25 473 5.3E-144 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS09380 27658e1ebf8b130a3fa02a4b0aa3a716 493 PANTHER PTHR11895:SF7 1 491 1.6E-209 T 14-09-2016 AMK01_RS09380 27658e1ebf8b130a3fa02a4b0aa3a716 493 Gene3D G3DSA:3.90.1300.10 2 489 1.3E-173 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS09380 27658e1ebf8b130a3fa02a4b0aa3a716 493 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 483 2.6E-169 T 14-09-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS09380 27658e1ebf8b130a3fa02a4b0aa3a716 493 PANTHER PTHR11895 1 491 1.6E-209 T 14-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS09380 27658e1ebf8b130a3fa02a4b0aa3a716 493 SUPERFAMILY SSF75304 3 491 1.7E-152 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS09380 27658e1ebf8b130a3fa02a4b0aa3a716 493 ProSitePatterns PS00571 Amidases signature. 157 188 - T 14-09-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS09380 27658e1ebf8b130a3fa02a4b0aa3a716 493 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 485 91.678 T 14-09-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 Pfam PF13377 Periplasmic binding protein-like domain 176 336 4.5E-29 T 14-09-2016 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 SUPERFAMILY SSF53822 78 332 2.01E-42 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 PANTHER PTHR30146 7 324 6.8E-60 T 14-09-2016 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 Gene3D G3DSA:1.10.260.40 8 62 1.0E-16 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 Gene3D G3DSA:3.40.50.2300 182 317 3.7E-37 T 14-09-2016 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 SMART SM00354 8 72 5.4E-7 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 SUPERFAMILY SSF47413 8 62 7.04E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 Gene3D G3DSA:3.40.50.2300 79 181 8.6E-14 T 14-09-2016 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 PANTHER PTHR30146:SF4 7 324 6.8E-60 T 14-09-2016 AMK01_RS00385 fc1e756cfe734aeff0be4899988f5b62 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 52 4.4E-14 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573:SF18 1223 1270 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573:SF18 836 938 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573 642 747 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573:SF18 956 1120 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573:SF18 191 308 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573:SF18 103 160 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Pfam PF02867 Ribonucleotide reductase, barrel domain 198 749 1.5E-105 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Pfam PF02867 Ribonucleotide reductase, barrel domain 809 913 4.8E-18 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Gene3D G3DSA:3.20.70.20 664 710 9.7E-96 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Gene3D G3DSA:3.20.70.20 43 65 9.7E-96 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Gene3D G3DSA:3.20.70.20 101 299 9.7E-96 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Gene3D G3DSA:3.20.70.20 390 591 9.7E-96 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Gene3D G3DSA:3.20.70.20 872 918 9.7E-96 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 SUPERFAMILY SSF75625 296 398 3.14E-14 T 14-09-2016 IPR029072 YebC-like AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573 103 160 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573 1223 1270 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 147 3.7E-41 T 14-09-2016 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 126 754 6.9E-142 T 14-09-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 Gene3D G3DSA:1.10.10.200 300 370 2.1E-5 T 14-09-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PRINTS PR01183 Ribonucleotide reductase large chain signature 275 294 4.2E-5 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PRINTS PR01183 Ribonucleotide reductase large chain signature 543 565 4.2E-5 T 14-09-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573:SF18 642 747 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573:SF18 399 617 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 SUPERFAMILY SSF51998 841 925 2.01E-125 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 SUPERFAMILY SSF51998 197 302 2.01E-125 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 SUPERFAMILY SSF51998 394 716 2.01E-125 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573 836 938 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573 956 1120 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573 191 308 0.0 T 14-09-2016 AMK01_RS08860 1d90b904e3e59e6032b7c64fea942bf6 1270 PANTHER PTHR11573 399 617 0.0 T 14-09-2016 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 Pfam PF01895 PhoU domain 445 529 2.0E-7 T 14-09-2016 IPR026022 PhoU domain AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 Pfam PF01895 PhoU domain 342 420 7.0E-9 T 14-09-2016 IPR026022 PhoU domain AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 70 521 1.3E-122 T 14-09-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 PANTHER PTHR10010:SF26 1 191 3.0E-12 T 14-09-2016 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 PANTHER PTHR10010:SF26 539 548 3.0E-12 T 14-09-2016 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 Gene3D G3DSA:1.20.58.220 327 419 1.9E-10 T 14-09-2016 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 Gene3D G3DSA:1.20.58.220 442 529 2.8E-10 T 14-09-2016 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 PANTHER PTHR10010 539 548 3.0E-12 T 14-09-2016 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 SUPERFAMILY SSF109755 327 532 2.93E-36 T 14-09-2016 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 PANTHER PTHR10010 1 191 3.0E-12 T 14-09-2016 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 Pfam PF02690 Na+/Pi-cotransporter 165 247 4.6E-7 T 14-09-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 AMK01_RS15520 fcfdc27522b679521265a2b37fd91c9d 548 Pfam PF02690 Na+/Pi-cotransporter 16 150 2.7E-31 T 14-09-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 PANTHER PTHR30537 3 325 1.1E-56 T 14-09-2016 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 Gene3D G3DSA:1.10.10.10 6 89 2.0E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 1.2E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 Gene3D G3DSA:3.40.190.10 186 274 2.5E-13 T 14-09-2016 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 SUPERFAMILY SSF46785 8 86 2.4E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 Gene3D G3DSA:3.40.190.10 105 185 7.8E-12 T 14-09-2016 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 SUPERFAMILY SSF53850 106 311 3.44E-23 T 14-09-2016 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.7E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.7E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.7E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20860 a55491a688f7e01279e86b78c9a39b17 326 Pfam PF03466 LysR substrate binding domain 109 307 4.5E-19 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS16405 789640dd60b0b9a25bf7699ffaab9286 78 Pfam PF04752 ChaC-like protein 3 70 8.7E-11 T 14-09-2016 IPR006840 ChaC-like protein AMK01_RS02020 5e70e3b508628edb1b6ea52ed59a63a9 184 Pfam PF04191 Phospholipid methyltransferase 74 157 3.0E-13 T 14-09-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 AMK01_RS21195 ca23219510a3ea7609822bf7fd0bccf3 180 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 42 180 7.0E-50 T 14-09-2016 IPR014351 Conserved hypothetical protein CHP00701 AMK01_RS21195 ca23219510a3ea7609822bf7fd0bccf3 180 Pfam PF03653 Uncharacterised protein family (UPF0093) 40 180 4.1E-59 T 14-09-2016 IPR005265 Uncharacterised protein family UPF0093 AMK01_RS21195 ca23219510a3ea7609822bf7fd0bccf3 180 PANTHER PTHR40255 40 180 3.1E-51 T 14-09-2016 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 SUPERFAMILY SSF55031 186 287 2.09E-26 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 PANTHER PTHR11014 7 396 7.6E-75 T 14-09-2016 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 Pfam PF01546 Peptidase family M20/M25/M40 69 389 2.5E-44 T 14-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 SUPERFAMILY SSF53187 4 185 2.04E-61 T 14-09-2016 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 SUPERFAMILY SSF53187 311 391 2.04E-61 T 14-09-2016 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 Gene3D G3DSA:3.30.70.360 195 287 2.1E-27 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 104 142 - T 14-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 393 48.341 T 14-09-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 Gene3D G3DSA:3.40.630.10 335 392 3.3E-72 T 14-09-2016 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 Gene3D G3DSA:3.40.630.10 4 194 3.3E-72 T 14-09-2016 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 68 77 - T 14-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 Pfam PF07687 Peptidase dimerisation domain 182 288 5.1E-25 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS02290 befeacb8cbceaf1b1ee14c8571207ab1 397 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 10 390 5.7E-123 T 14-09-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 AMK01_RS03945 a08625b7160883511f47b402502b3e5c 326 SUPERFAMILY SSF51735 1 318 6.71E-91 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03945 a08625b7160883511f47b402502b3e5c 326 TIGRFAM TIGR04180 EDH_00030: NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family 5 298 3.3E-156 T 14-09-2016 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family AMK01_RS03945 a08625b7160883511f47b402502b3e5c 326 PANTHER PTHR10366:SF253 3 318 5.3E-143 T 14-09-2016 AMK01_RS03945 a08625b7160883511f47b402502b3e5c 326 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 305 2.5E-67 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03945 a08625b7160883511f47b402502b3e5c 326 Gene3D G3DSA:3.40.50.720 2 186 5.3E-60 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03945 a08625b7160883511f47b402502b3e5c 326 Gene3D G3DSA:3.90.25.10 187 315 1.4E-30 T 14-09-2016 AMK01_RS03945 a08625b7160883511f47b402502b3e5c 326 PANTHER PTHR10366 3 318 5.3E-143 T 14-09-2016 AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 Gene3D G3DSA:1.10.10.10 7 81 8.8E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 SUPERFAMILY SSF46785 8 78 4.08E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 SMART SM00895 98 224 5.0E-23 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 Pfam PF07729 FCD domain 98 223 8.2E-25 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 SUPERFAMILY SSF48008 95 229 1.62E-28 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.1E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.1E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 SMART SM00345 15 74 8.9E-20 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.7E-19 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 Gene3D G3DSA:1.20.120.530 95 231 2.3E-28 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS10560 a5859e83a9296e58e002e0039f713ffe 236 PANTHER PTHR11751 13 114 4.4E-26 T 14-09-2016 AMK01_RS01250 556e628a458bb3421831e754c4ab07c3 510 PANTHER PTHR30290 2 510 1.2E-116 T 14-09-2016 AMK01_RS01250 556e628a458bb3421831e754c4ab07c3 510 SUPERFAMILY SSF53850 33 495 2.84E-124 T 14-09-2016 AMK01_RS01250 556e628a458bb3421831e754c4ab07c3 510 PANTHER PTHR30290:SF14 2 510 1.2E-116 T 14-09-2016 AMK01_RS01250 556e628a458bb3421831e754c4ab07c3 510 PIRSF PIRSF002741 5 510 2.5E-104 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK01_RS01250 556e628a458bb3421831e754c4ab07c3 510 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 416 4.0E-86 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS01250 556e628a458bb3421831e754c4ab07c3 510 Gene3D G3DSA:3.90.76.10 49 194 7.9E-41 T 14-09-2016 AMK01_RS01250 556e628a458bb3421831e754c4ab07c3 510 Gene3D G3DSA:3.40.190.10 195 297 1.1E-34 T 14-09-2016 AMK01_RS01250 556e628a458bb3421831e754c4ab07c3 510 Gene3D G3DSA:3.10.105.10 298 477 4.3E-48 T 14-09-2016 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 21 613 6.6E-232 T 14-09-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 Gene3D G3DSA:3.50.50.60 364 436 6.3E-124 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 Gene3D G3DSA:3.50.50.60 9 256 6.3E-124 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 Gene3D G3DSA:4.10.80.40 552 613 1.4E-25 T 14-09-2016 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 Pfam PF00890 FAD binding domain 21 418 8.0E-126 T 14-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 18 613 5.7E-280 T 14-09-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 SUPERFAMILY SSF51905 13 273 9.83E-77 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 SUPERFAMILY SSF51905 372 449 9.83E-77 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 SUPERFAMILY SSF56425 250 368 3.89E-41 T 14-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 Gene3D G3DSA:1.20.58.100 448 551 7.6E-38 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 Gene3D G3DSA:3.90.700.10 257 362 8.7E-41 T 14-09-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 SUPERFAMILY SSF46977 465 613 3.4E-46 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 613 7.1E-43 T 14-09-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 55 64 - T 14-09-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 PANTHER PTHR11632:SF51 13 608 0.0 T 14-09-2016 AMK01_RS20035 dd74bbc03221977b82bc4c3f4eb129b3 613 PANTHER PTHR11632 13 608 0.0 T 14-09-2016 AMK01_RS08055 302a0d53e24e5dfcce689968213d6e1b 201 SUPERFAMILY SSF53335 32 188 1.37E-9 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS08055 302a0d53e24e5dfcce689968213d6e1b 201 Pfam PF13578 Methyltransferase domain 47 155 3.7E-11 T 14-09-2016 AMK01_RS08055 302a0d53e24e5dfcce689968213d6e1b 201 Gene3D G3DSA:3.40.50.150 37 182 6.0E-4 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS19185 9782b71b85d716783bf0dc6d8681a5c8 407 PANTHER PTHR11920:SF348 173 397 7.5E-69 T 14-09-2016 AMK01_RS19185 9782b71b85d716783bf0dc6d8681a5c8 407 SMART SM00044 187 388 6.9E-7 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS19185 9782b71b85d716783bf0dc6d8681a5c8 407 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 228 398 1.6E-22 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS19185 9782b71b85d716783bf0dc6d8681a5c8 407 SUPERFAMILY SSF55073 221 404 1.44E-48 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS19185 9782b71b85d716783bf0dc6d8681a5c8 407 Gene3D G3DSA:3.30.70.1230 227 404 1.3E-35 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS19185 9782b71b85d716783bf0dc6d8681a5c8 407 PANTHER PTHR11920 173 397 7.5E-69 T 14-09-2016 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 SMART SM00421 186 243 3.3E-23 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 PANTHER PTHR26402 82 245 4.6E-15 T 14-09-2016 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 Gene3D G3DSA:1.10.10.10 184 244 1.7E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 231 7.6E-13 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 219 7.6E-13 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 203 7.6E-13 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 PANTHER PTHR26402:SF458 82 245 4.6E-15 T 14-09-2016 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 SUPERFAMILY SSF46894 179 245 4.76E-20 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 Pfam PF00196 Bacterial regulatory proteins, luxR family 188 241 3.6E-22 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS00345 7e6d40ef942b3fda9ed464bf936df0a6 260 ProSitePatterns PS00622 LuxR-type HTH domain signature. 203 230 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS18595 84b40358565e1e2c5356b5b7ee23c6fb 337 Pfam PF04773 FecR protein 55 154 3.4E-12 T 14-09-2016 IPR006860 FecR protein AMK01_RS14255 35480e59c21f1351d4a81770eb8efeaa 126 Pfam PF03640 Secreted repeat of unknown function 29 70 1.1E-15 T 14-09-2016 IPR005297 Lipoprotein repeat AMK01_RS14255 35480e59c21f1351d4a81770eb8efeaa 126 Pfam PF03640 Secreted repeat of unknown function 82 125 4.8E-20 T 14-09-2016 IPR005297 Lipoprotein repeat AMK01_RS14255 35480e59c21f1351d4a81770eb8efeaa 126 PANTHER PTHR39335 8 126 1.0E-37 T 14-09-2016 AMK01_RS14255 35480e59c21f1351d4a81770eb8efeaa 126 PIRSF PIRSF029720 1 126 2.8E-53 T 14-09-2016 IPR014558 Uncharacterised conserved lipoprotein AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 Gene3D G3DSA:3.40.50.2300 299 353 1.4E-35 T 14-09-2016 AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 Gene3D G3DSA:3.40.50.2300 19 144 1.4E-35 T 14-09-2016 AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 85 95 3.4E-7 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 23 39 3.4E-7 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 332 347 3.4E-7 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 3.4E-7 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 Pfam PF13458 Periplasmic binding protein 22 363 8.3E-63 T 14-09-2016 IPR028081 Leucine-binding protein domain AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 Gene3D G3DSA:3.40.50.2300 147 298 5.0E-19 T 14-09-2016 AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 SUPERFAMILY SSF53822 22 371 1.21E-76 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 PANTHER PTHR30483:SF13 4 379 1.3E-81 T 14-09-2016 AMK01_RS17780 905ca8edaf28fd976ac70ed05dc582f0 390 PANTHER PTHR30483 4 379 1.3E-81 T 14-09-2016 AMK01_RS06320 e978b66645eebcb9a6a412245bf91386 430 Pfam PF01266 FAD dependent oxidoreductase 41 391 7.4E-49 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS06320 e978b66645eebcb9a6a412245bf91386 430 SUPERFAMILY SSF51905 40 248 2.16E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06320 e978b66645eebcb9a6a412245bf91386 430 SUPERFAMILY SSF51905 355 416 2.16E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06320 e978b66645eebcb9a6a412245bf91386 430 PANTHER PTHR13847 3 397 1.5E-63 T 14-09-2016 AMK01_RS06320 e978b66645eebcb9a6a412245bf91386 430 Gene3D G3DSA:3.50.50.60 29 130 3.8E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06320 e978b66645eebcb9a6a412245bf91386 430 Gene3D G3DSA:3.50.50.60 355 410 3.8E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06320 e978b66645eebcb9a6a412245bf91386 430 Gene3D G3DSA:3.50.50.60 182 256 3.8E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06320 e978b66645eebcb9a6a412245bf91386 430 PANTHER PTHR13847:SF201 3 397 1.5E-63 T 14-09-2016 AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 SUPERFAMILY SSF56300 1 243 8.55E-49 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 PIRSF PIRSF000883 1 246 6.4E-57 T 14-09-2016 IPR011152 Phosphoesterase MJ0912 AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 PANTHER PTHR11124 93 118 7.3E-48 T 14-09-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 PANTHER PTHR11124 134 232 7.3E-48 T 14-09-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 PANTHER PTHR11124:SF2 1 72 7.3E-48 T 14-09-2016 AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 PANTHER PTHR11124:SF2 93 118 7.3E-48 T 14-09-2016 AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 PANTHER PTHR11124:SF2 134 232 7.3E-48 T 14-09-2016 AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 205 3.1E-26 T 14-09-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 PANTHER PTHR11124 1 72 7.3E-48 T 14-09-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 AMK01_RS15975 c727f7e76461470952c7e1ee2e504fbd 246 Gene3D G3DSA:3.60.21.10 1 244 1.9E-46 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 SUPERFAMILY SSF158837 642 763 1.7E-12 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 SUPERFAMILY SSF158837 130 241 2.75E-25 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Pfam PF06748 Protein of unknown function (DUF1217) 923 1077 1.6E-47 T 14-09-2016 IPR010626 Protein of unknown function DUF1217 AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Pfam PF06748 Protein of unknown function (DUF1217) 173 305 1.6E-15 T 14-09-2016 IPR010626 Protein of unknown function DUF1217 AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Pfam PF06748 Protein of unknown function (DUF1217) 799 920 1.0E-12 T 14-09-2016 IPR010626 Protein of unknown function DUF1217 AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Pfam PF06748 Protein of unknown function (DUF1217) 61 175 2.9E-21 T 14-09-2016 IPR010626 Protein of unknown function DUF1217 AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Pfam PF06748 Protein of unknown function (DUF1217) 526 592 7.7E-7 T 14-09-2016 IPR010626 Protein of unknown function DUF1217 AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 SUPERFAMILY SSF158837 887 1092 1.27E-60 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 SUPERFAMILY SSF158837 539 635 3.4E-15 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Gene3D G3DSA:1.10.3700.10 234 405 1.4E-25 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Gene3D G3DSA:1.10.3700.10 1 131 2.9E-56 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Gene3D G3DSA:1.10.3700.10 887 1093 1.3E-81 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Gene3D G3DSA:1.10.3700.10 511 683 7.2E-17 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Gene3D G3DSA:1.10.3700.10 132 233 8.8E-26 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 Gene3D G3DSA:1.10.3700.10 697 867 4.9E-34 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 SUPERFAMILY SSF158837 765 868 3.79E-21 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 SUPERFAMILY SSF158837 259 354 1.18E-15 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 SUPERFAMILY SSF158837 1 128 3.79E-44 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS04570 a2262459f932036f38fb48005699952d 1111 SUPERFAMILY SSF158837 371 533 3.4E-24 T 14-09-2016 IPR023157 AGR-C-984p-like domain AMK01_RS19065 071e28d988613837f2ac892857b958ab 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 139 1.3E-61 T 14-09-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AMK01_RS19065 071e28d988613837f2ac892857b958ab 143 Gene3D G3DSA:3.30.300.20 3 142 2.2E-53 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS19065 071e28d988613837f2ac892857b958ab 143 Pfam PF02566 OsmC-like protein 45 138 1.5E-18 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS19065 071e28d988613837f2ac892857b958ab 143 PANTHER PTHR33797:SF1 1 142 1.3E-59 T 14-09-2016 AMK01_RS19065 071e28d988613837f2ac892857b958ab 143 SUPERFAMILY SSF82784 1 138 5.23E-37 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS19065 071e28d988613837f2ac892857b958ab 143 PANTHER PTHR33797 1 142 1.3E-59 T 14-09-2016 AMK01_RS02085 429fc4163d01c114021ea30a56e3c7ce 142 PANTHER PTHR33202 8 135 7.1E-39 T 14-09-2016 AMK01_RS02085 429fc4163d01c114021ea30a56e3c7ce 142 Pfam PF01475 Ferric uptake regulator family 14 133 1.4E-44 T 14-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK01_RS02085 429fc4163d01c114021ea30a56e3c7ce 142 SUPERFAMILY SSF46785 8 135 6.35E-38 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02085 429fc4163d01c114021ea30a56e3c7ce 142 Gene3D G3DSA:1.10.10.10 7 85 8.8E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02335 63c05986fdeaf7355ca0503d063e0224 121 PANTHER PTHR33154 17 110 6.2E-21 T 14-09-2016 AMK01_RS02335 63c05986fdeaf7355ca0503d063e0224 121 SUPERFAMILY SSF46785 18 101 1.19E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02335 63c05986fdeaf7355ca0503d063e0224 121 SMART SM00418 20 98 7.2E-21 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS02335 63c05986fdeaf7355ca0503d063e0224 121 Gene3D G3DSA:1.10.10.10 17 106 1.2E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02335 63c05986fdeaf7355ca0503d063e0224 121 Pfam PF12840 Helix-turn-helix domain 19 78 5.3E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02335 63c05986fdeaf7355ca0503d063e0224 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 6.5E-11 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS02335 63c05986fdeaf7355ca0503d063e0224 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 6.5E-11 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS02335 63c05986fdeaf7355ca0503d063e0224 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 6.5E-11 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 SMART SM00421 165 222 0.0029 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 Gene3D G3DSA:1.10.10.10 158 227 4.3E-11 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 SUPERFAMILY SSF46955 41 154 1.72E-19 T 14-09-2016 IPR009061 Putative DNA-binding domain AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 PANTHER PTHR30204 32 227 2.5E-13 T 14-09-2016 AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 Gene3D G3DSA:1.10.1660.10 41 152 5.3E-23 T 14-09-2016 AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 166 221 2.7E-6 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 SMART SM00422 39 106 4.6E-10 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 Pfam PF13411 MerR HTH family regulatory protein 41 105 2.4E-13 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS14215 6bbd0933535218ba0f3b07ddeb68eb74 230 SUPERFAMILY SSF46894 162 228 1.8E-10 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS05135 8e228a080bc58734ef7ec718765b2e75 149 PANTHER PTHR33639 6 148 4.7E-37 T 14-09-2016 AMK01_RS05135 8e228a080bc58734ef7ec718765b2e75 149 Pfam PF04134 Protein of unknown function, DUF393 24 133 5.1E-27 T 14-09-2016 IPR007263 Protein of unknown function DUF393 AMK01_RS01580 948a2d377f7ef74e66d0f43000f002e6 303 SUPERFAMILY SSF103481 50 140 2.88E-10 T 14-09-2016 AMK01_RS01580 948a2d377f7ef74e66d0f43000f002e6 303 SUPERFAMILY SSF103481 181 281 8.37E-18 T 14-09-2016 AMK01_RS01580 948a2d377f7ef74e66d0f43000f002e6 303 PANTHER PTHR32322 1 303 9.7E-46 T 14-09-2016 AMK01_RS01580 948a2d377f7ef74e66d0f43000f002e6 303 Pfam PF00892 EamA-like transporter family 12 137 1.3E-10 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS01580 948a2d377f7ef74e66d0f43000f002e6 303 Pfam PF00892 EamA-like transporter family 148 279 5.0E-25 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 1.6E-15 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 Gene3D G3DSA:3.90.1150.10 369 453 6.3E-7 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 SUPERFAMILY SSF46785 9 84 3.18E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 PANTHER PTHR11751 90 464 3.4E-149 T 14-09-2016 AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 SUPERFAMILY SSF53383 103 456 2.13E-85 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 SMART SM00345 21 80 1.4E-14 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 PANTHER PTHR11751:SF386 90 464 3.4E-149 T 14-09-2016 AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 Gene3D G3DSA:3.40.640.10 144 365 6.0E-62 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 Pfam PF00155 Aminotransferase class I and II 141 454 6.4E-39 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS13690 38e5b39f00da7f182b204a7bb99f05e8 470 Gene3D G3DSA:1.10.10.10 15 81 1.7E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 Gene3D G3DSA:3.40.50.300 123 321 2.7E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 PANTHER PTHR32039 1 434 1.6E-186 T 14-09-2016 AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 Pfam PF13541 Subunit ChlI of Mg-chelatase 1 74 1.4E-20 T 14-09-2016 AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 PANTHER PTHR32039:SF7 1 434 1.6E-186 T 14-09-2016 IPR004482 Mg chelatase-related protein AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 1 434 4.7E-135 T 14-09-2016 IPR004482 Mg chelatase-related protein AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 Pfam PF01078 Magnesium chelatase, subunit ChlI 123 328 9.3E-94 T 14-09-2016 IPR000523 Magnesium chelatase ChlI domain AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 Gene3D G3DSA:3.30.230.10 1 81 5.3E-13 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 336 434 8.2E-30 T 14-09-2016 IPR025158 Mg chelatase-related protein, C-terminal domain AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 SUPERFAMILY SSF52540 123 433 2.08E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 SMART SM00382 143 325 7.3E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS26335 e924810bbcfb0314861464b053fc12d2 434 SUPERFAMILY SSF54211 1 103 6.45E-16 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS12960 6da9c52568b8782fa3f99be083a5a83d 322 Gene3D G3DSA:1.10.3720.10 87 318 4.4E-57 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12960 6da9c52568b8782fa3f99be083a5a83d 322 SUPERFAMILY SSF160964 31 91 1.11E-9 T 14-09-2016 AMK01_RS12960 6da9c52568b8782fa3f99be083a5a83d 322 SUPERFAMILY SSF161098 81 308 5.49E-56 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12960 6da9c52568b8782fa3f99be083a5a83d 322 Gene3D G3DSA:1.20.58.370 31 68 3.9E-10 T 14-09-2016 AMK01_RS12960 6da9c52568b8782fa3f99be083a5a83d 322 PANTHER PTHR30193:SF23 25 322 1.4E-142 T 14-09-2016 AMK01_RS12960 6da9c52568b8782fa3f99be083a5a83d 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 309 3.8E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12960 6da9c52568b8782fa3f99be083a5a83d 322 PANTHER PTHR30193 25 322 1.4E-142 T 14-09-2016 AMK01_RS01200 1d851bfa2dd33f798c57a3c1ee4921a3 335 Pfam PF00482 Type II secretion system (T2SS), protein F 168 292 1.3E-20 T 14-09-2016 IPR018076 Type II secretion system F domain AMK01_RS01200 1d851bfa2dd33f798c57a3c1ee4921a3 335 PANTHER PTHR35007:SF1 1 335 1.6E-67 T 14-09-2016 AMK01_RS01200 1d851bfa2dd33f798c57a3c1ee4921a3 335 PANTHER PTHR35007 1 335 1.6E-67 T 14-09-2016 AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 SUPERFAMILY SSF51735 6 252 2.84E-78 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.9E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.9E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.9E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 6.9E-60 T 14-09-2016 AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.0E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.0E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.0E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.0E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.0E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.0E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 144 7.5E-4 T 14-09-2016 AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PANTHER PTHR24322 12 140 1.8E-51 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 PANTHER PTHR24322 156 188 1.8E-51 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19070 80257936c831a5b5f952b395c81c93ab 259 Gene3D G3DSA:3.40.50.720 1 254 3.6E-79 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02720 2ef8a3b1710976e1d6b4ff6f1c46df7f 493 Pfam PF12501 Phosphate ATP-binding cassette transporter 7 171 1.8E-54 T 14-09-2016 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 AMK01_RS02720 2ef8a3b1710976e1d6b4ff6f1c46df7f 493 PANTHER PTHR30425 183 493 6.6E-103 T 14-09-2016 AMK01_RS02720 2ef8a3b1710976e1d6b4ff6f1c46df7f 493 SUPERFAMILY SSF161098 242 479 3.53E-32 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02720 2ef8a3b1710976e1d6b4ff6f1c46df7f 493 Gene3D G3DSA:1.10.3720.10 252 489 1.6E-36 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02720 2ef8a3b1710976e1d6b4ff6f1c46df7f 493 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 189 488 9.1E-86 T 14-09-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AMK01_RS02720 2ef8a3b1710976e1d6b4ff6f1c46df7f 493 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 275 489 1.1E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02720 2ef8a3b1710976e1d6b4ff6f1c46df7f 493 PANTHER PTHR30425:SF3 183 493 6.6E-103 T 14-09-2016 AMK01_RS06480 931b70f6445fde34b9e96e0bef7b4e6f 158 Pfam PF03692 Putative zinc- or iron-chelating domain 24 91 1.9E-8 T 14-09-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein AMK01_RS06480 931b70f6445fde34b9e96e0bef7b4e6f 158 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 147 43.41 T 14-09-2016 IPR008228 Uncharacterised conserved protein UCP006173 AMK01_RS06480 931b70f6445fde34b9e96e0bef7b4e6f 158 PIRSF PIRSF006173 1 147 6.4E-67 T 14-09-2016 IPR008228 Uncharacterised conserved protein UCP006173 AMK01_RS06480 931b70f6445fde34b9e96e0bef7b4e6f 158 PANTHER PTHR37421:SF1 1 150 2.8E-66 T 14-09-2016 AMK01_RS06480 931b70f6445fde34b9e96e0bef7b4e6f 158 PANTHER PTHR37421 1 150 2.8E-66 T 14-09-2016 AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 SMART SM00487 21 221 7.8E-67 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 PANTHER PTHR24031 1 425 1.8E-177 T 14-09-2016 AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 PANTHER PTHR24031 442 477 1.8E-177 T 14-09-2016 AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 PANTHER PTHR24031:SF261 1 425 1.8E-177 T 14-09-2016 AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 PANTHER PTHR24031:SF261 442 477 1.8E-177 T 14-09-2016 AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 Gene3D G3DSA:3.40.50.300 211 371 3.0E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 SUPERFAMILY SSF52540 74 361 2.77E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 Pfam PF00271 Helicase conserved C-terminal domain 233 341 2.3E-29 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 Pfam PF00270 DEAD/DEAH box helicase 26 195 4.0E-51 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 SMART SM00490 260 341 1.5E-31 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-09-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMK01_RS11600 5ada956697f51b91da6086ca92513b95 499 Gene3D G3DSA:3.40.50.300 2 210 1.6E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 Pfam PF07687 Peptidase dimerisation domain 216 310 8.8E-6 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 14 411 1.7E-117 T 14-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 PANTHER PTHR32494 7 414 1.3E-140 T 14-09-2016 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 Gene3D G3DSA:3.30.70.360 230 328 1.2E-34 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 Pfam PF01546 Peptidase family M20/M25/M40 85 410 5.6E-38 T 14-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 SUPERFAMILY SSF53187 6 227 6.54E-88 T 14-09-2016 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 SUPERFAMILY SSF53187 340 413 6.54E-88 T 14-09-2016 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 PANTHER PTHR32494:SF6 7 414 1.3E-140 T 14-09-2016 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 PIRSF PIRSF001235 8 415 2.9E-117 T 14-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 Gene3D G3DSA:3.40.630.10 7 229 3.7E-106 T 14-09-2016 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 Gene3D G3DSA:3.40.630.10 355 414 3.7E-106 T 14-09-2016 AMK01_RS16915 bce859eb85d84827c3890d0306bbfd6c 417 SUPERFAMILY SSF55031 217 333 4.45E-28 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS04620 386bf7e88d52e863ca3a67bfad46e76b 334 Gene3D G3DSA:3.60.15.10 36 332 6.8E-73 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS04620 386bf7e88d52e863ca3a67bfad46e76b 334 PANTHER PTHR15032 47 331 5.9E-87 T 14-09-2016 AMK01_RS04620 386bf7e88d52e863ca3a67bfad46e76b 334 Pfam PF12706 Beta-lactamase superfamily domain 90 289 4.7E-35 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS04620 386bf7e88d52e863ca3a67bfad46e76b 334 SUPERFAMILY SSF56281 73 296 1.7E-29 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS04620 386bf7e88d52e863ca3a67bfad46e76b 334 PANTHER PTHR15032:SF4 47 331 5.9E-87 T 14-09-2016 AMK01_RS01140 b8c5862753aa4f715325069d39cb2b65 322 PANTHER PTHR11409 7 322 3.3E-83 T 14-09-2016 AMK01_RS01140 b8c5862753aa4f715325069d39cb2b65 322 Gene3D G3DSA:3.20.20.140 4 322 3.4E-88 T 14-09-2016 AMK01_RS01140 b8c5862753aa4f715325069d39cb2b65 322 Hamap MF_01962 Adenine deaminase. 1 311 64.853 T 14-09-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AMK01_RS01140 b8c5862753aa4f715325069d39cb2b65 322 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 322 8.4E-95 T 14-09-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 AMK01_RS01140 b8c5862753aa4f715325069d39cb2b65 322 Pfam PF00962 Adenosine/AMP deaminase 5 319 2.3E-59 T 14-09-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 AMK01_RS01140 b8c5862753aa4f715325069d39cb2b65 322 SUPERFAMILY SSF51556 5 321 4.54E-75 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS01140 b8c5862753aa4f715325069d39cb2b65 322 PANTHER PTHR11409:SF36 7 322 3.3E-83 T 14-09-2016 AMK01_RS21760 d2586e1497cc9d99455af2708d4feb24 67 SUPERFAMILY SSF53041 39 67 1.83E-5 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS21760 d2586e1497cc9d99455af2708d4feb24 67 Gene3D G3DSA:3.40.50.1390 41 67 2.2E-5 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS21760 d2586e1497cc9d99455af2708d4feb24 67 ProSitePatterns PS00397 Site-specific recombinases active site. 44 52 - T 14-09-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 SUPERFAMILY SSF50331 259 335 3.68E-8 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 PANTHER PTHR24220:SF151 5 249 1.0E-108 T 14-09-2016 AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 Pfam PF08402 TOBE domain 276 335 1.6E-6 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 SMART SM00382 29 216 2.5E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 Pfam PF00005 ABC transporter 22 166 1.5E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 Gene3D G3DSA:3.40.50.300 5 231 2.7E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 PANTHER PTHR24220 5 249 1.0E-108 T 14-09-2016 AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 SUPERFAMILY SSF52540 5 247 8.12E-77 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13975 c5bd8d2310945f65732cac78dc06b44d 339 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PANTHER PTHR24322:SF328 152 184 9.5E-64 T 14-09-2016 AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PANTHER PTHR24322:SF328 11 136 9.5E-64 T 14-09-2016 AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 Gene3D G3DSA:3.40.50.720 1 244 2.6E-90 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.2E-16 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.2E-16 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.2E-16 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.3E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.3E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.3E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.3E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.3E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PANTHER PTHR24322 11 136 9.5E-64 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 PANTHER PTHR24322 152 184 9.5E-64 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 2.5E-6 T 14-09-2016 AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 3.3E-66 T 14-09-2016 AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 4.4E-101 T 14-09-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS07390 6d76ea61a66dc0c459597399ca5d8a4a 245 SUPERFAMILY SSF51735 6 244 1.15E-86 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 PANTHER PTHR11592 1 180 6.6E-71 T 14-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 PRINTS PR01011 Glutathione peroxidase family signature 23 40 3.3E-17 T 14-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 PRINTS PR01011 Glutathione peroxidase family signature 141 150 3.3E-17 T 14-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 PRINTS PR01011 Glutathione peroxidase family signature 58 74 3.3E-17 T 14-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 PIRSF PIRSF000303 1 182 8.8E-57 T 14-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 Gene3D G3DSA:3.40.30.10 4 180 1.3E-57 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 SUPERFAMILY SSF52833 5 179 3.84E-49 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 14-09-2016 IPR029759 Glutathione peroxidase active site AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 PANTHER PTHR11592:SF40 1 180 6.6E-71 T 14-09-2016 AMK01_RS08065 c50dd8961018288ab1b4b1fe05e5ee4c 182 Pfam PF00255 Glutathione peroxidase 6 111 5.8E-36 T 14-09-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 AMK01_RS15935 4ae25ab8146329cb9f43c62dd633e39a 380 SUPERFAMILY SSF51395 4 374 6.72E-108 T 14-09-2016 AMK01_RS15935 4ae25ab8146329cb9f43c62dd633e39a 380 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 14-09-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AMK01_RS15935 4ae25ab8146329cb9f43c62dd633e39a 380 PANTHER PTHR10578 1 376 3.4E-203 T 14-09-2016 AMK01_RS15935 4ae25ab8146329cb9f43c62dd633e39a 380 PANTHER PTHR10578:SF76 1 376 3.4E-203 T 14-09-2016 AMK01_RS15935 4ae25ab8146329cb9f43c62dd633e39a 380 Pfam PF01070 FMN-dependent dehydrogenase 14 377 6.6E-138 T 14-09-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 AMK01_RS15935 4ae25ab8146329cb9f43c62dd633e39a 380 PIRSF PIRSF000138 1 379 3.1E-131 T 14-09-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AMK01_RS15935 4ae25ab8146329cb9f43c62dd633e39a 380 Gene3D G3DSA:3.20.20.70 5 377 1.3E-145 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS28365 6fa5c7809eb7a79f7d7909f12d76f289 219 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 4 219 2.3E-92 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS28365 6fa5c7809eb7a79f7d7909f12d76f289 219 Gene3D G3DSA:3.40.640.10 3 219 8.0E-79 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS28365 6fa5c7809eb7a79f7d7909f12d76f289 219 SUPERFAMILY SSF53383 12 219 1.31E-75 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS28365 6fa5c7809eb7a79f7d7909f12d76f289 219 PANTHER PTHR30244 12 219 5.7E-98 T 14-09-2016 AMK01_RS28365 6fa5c7809eb7a79f7d7909f12d76f289 219 PANTHER PTHR30244:SF16 12 219 5.7E-98 T 14-09-2016 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 Pfam PF13426 PAS domain 149 247 2.7E-11 T 14-09-2016 IPR000014 PAS domain AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 SMART SM00091 12 80 1.7 T 14-09-2016 IPR000014 PAS domain AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 SMART SM00091 133 201 28.0 T 14-09-2016 IPR000014 PAS domain AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 SUPERFAMILY SSF55785 22 127 9.95E-24 T 14-09-2016 IPR000014 PAS domain AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 250 7.3E-12 T 14-09-2016 IPR000014 PAS domain AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 128 1.2E-15 T 14-09-2016 IPR000014 PAS domain AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 Gene3D G3DSA:3.30.450.20 22 124 1.9E-23 T 14-09-2016 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 Gene3D G3DSA:3.30.450.20 144 247 1.7E-19 T 14-09-2016 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 PANTHER PTHR24422:SF12 373 548 2.7E-145 T 14-09-2016 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 SMART SM00086 206 248 0.6 T 14-09-2016 IPR001610 PAC motif AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 SMART SM00086 85 126 0.0023 T 14-09-2016 IPR001610 PAC motif AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 Gene3D G3DSA:1.10.287.950 315 518 8.9E-57 T 14-09-2016 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 424 2.7E-43 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 426 455 2.7E-43 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 320 349 2.7E-43 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 2.7E-43 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 357 545 4.9E-57 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 PANTHER PTHR24422:SF12 10 310 2.7E-145 T 14-09-2016 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 PANTHER PTHR24422 373 548 2.7E-145 T 14-09-2016 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 PANTHER PTHR24422 10 310 2.7E-145 T 14-09-2016 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 SMART SM00283 299 546 5.7E-100 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 SUPERFAMILY SSF55785 144 245 1.13E-20 T 14-09-2016 IPR000014 PAS domain AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 Pfam PF08447 PAS fold 35 119 4.9E-12 T 14-09-2016 IPR013655 PAS fold-3 GO:0005515 AMK01_RS05980 d8ee3a6a4d4cd58eee13c51a53907401 596 SUPERFAMILY SSF58104 266 552 2.01E-68 T 14-09-2016 AMK01_RS06030 9e498959f6582bb511cca0b9e3e56ed1 78 PANTHER PTHR21109:SF3 1 75 8.1E-33 T 14-09-2016 AMK01_RS06030 9e498959f6582bb511cca0b9e3e56ed1 78 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 56 2.4E-20 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS06030 9e498959f6582bb511cca0b9e3e56ed1 78 Pfam PF01165 Ribosomal protein S21 2 55 7.7E-19 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS06030 9e498959f6582bb511cca0b9e3e56ed1 78 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 51 2.0E-12 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS06030 9e498959f6582bb511cca0b9e3e56ed1 78 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 10 55 12.223 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS06030 9e498959f6582bb511cca0b9e3e56ed1 78 PANTHER PTHR21109 1 75 8.1E-33 T 14-09-2016 AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 Gene3D G3DSA:3.30.70.1230 339 440 2.4E-4 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 SUPERFAMILY SSF53474 10 288 4.82E-47 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 Gene3D G3DSA:3.40.50.1820 16 288 3.2E-48 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 1.0E-6 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 87 1.0E-6 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 1.0E-6 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 PRINTS PR00111 Alpha/beta hydrolase fold signature 234 248 1.0E-6 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 PANTHER PTHR10992:SF878 16 290 3.1E-49 T 14-09-2016 AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 SUPERFAMILY SSF55073 297 443 1.88E-16 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 PANTHER PTHR10992 16 290 3.1E-49 T 14-09-2016 AMK01_RS08845 2ae8c152eabb756a862ddc0a254bfe71 446 Pfam PF00561 alpha/beta hydrolase fold 43 272 6.6E-16 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS02065 518119742c44b4cdbfba55d5cdac3daa 171 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 160 24.811 T 14-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK01_RS02065 518119742c44b4cdbfba55d5cdac3daa 171 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 126 136 - T 14-09-2016 IPR020549 Endoribonuclease YbeY, conserved site AMK01_RS02065 518119742c44b4cdbfba55d5cdac3daa 171 SUPERFAMILY SSF55486 47 162 1.78E-44 T 14-09-2016 AMK01_RS02065 518119742c44b4cdbfba55d5cdac3daa 171 Pfam PF02130 Uncharacterized protein family UPF0054 43 156 2.8E-39 T 14-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK01_RS02065 518119742c44b4cdbfba55d5cdac3daa 171 PANTHER PTHR22881 50 167 1.1E-54 T 14-09-2016 AMK01_RS02065 518119742c44b4cdbfba55d5cdac3daa 171 Gene3D G3DSA:3.40.390.30 49 165 1.9E-46 T 14-09-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AMK01_RS02065 518119742c44b4cdbfba55d5cdac3daa 171 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 50 157 4.7E-39 T 14-09-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 251 1.0E-67 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 14-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 Gene3D G3DSA:3.40.190.10 28 115 5.5E-48 T 14-09-2016 AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 Gene3D G3DSA:3.40.190.10 213 254 5.5E-48 T 14-09-2016 AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 SUPERFAMILY SSF53850 8 254 2.66E-76 T 14-09-2016 AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 SMART SM00079 29 252 3.1E-5 T 14-09-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 SMART SM00062 29 253 7.3E-70 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 PANTHER PTHR18966 24 250 1.6E-71 T 14-09-2016 AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 PANTHER PTHR18966:SF152 24 250 1.6E-71 T 14-09-2016 AMK01_RS12355 887034c70f159b6de7e3e5b957135565 257 Gene3D G3DSA:3.40.190.10 117 202 1.5E-25 T 14-09-2016 AMK01_RS06665 ffd57fec2d039fcd9e4b6540c0dec75a 440 Gene3D G3DSA:2.40.50.100 219 250 5.7E-15 T 14-09-2016 AMK01_RS06665 ffd57fec2d039fcd9e4b6540c0dec75a 440 Gene3D G3DSA:2.40.50.100 113 144 5.7E-15 T 14-09-2016 AMK01_RS06665 ffd57fec2d039fcd9e4b6540c0dec75a 440 PANTHER PTHR30469 86 421 1.2E-72 T 14-09-2016 AMK01_RS06665 ffd57fec2d039fcd9e4b6540c0dec75a 440 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 139 327 2.1E-14 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS06665 ffd57fec2d039fcd9e4b6540c0dec75a 440 SUPERFAMILY SSF111369 101 334 7.98E-43 T 14-09-2016 AMK01_RS06665 ffd57fec2d039fcd9e4b6540c0dec75a 440 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 86 410 1.6E-86 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS06665 ffd57fec2d039fcd9e4b6540c0dec75a 440 PANTHER PTHR30469:SF0 86 421 1.2E-72 T 14-09-2016 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 Pfam PF02817 e3 binding domain 138 172 7.5E-16 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 Gene3D G3DSA:4.10.320.10 133 183 1.7E-20 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 Gene3D G3DSA:3.30.559.10 216 447 4.4E-89 T 14-09-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 Pfam PF00364 Biotin-requiring enzyme 4 77 1.4E-21 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 SUPERFAMILY SSF52777 216 447 1.65E-79 T 14-09-2016 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 448 5.9E-177 T 14-09-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 PANTHER PTHR23151:SF9 5 198 1.7E-199 T 14-09-2016 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 PANTHER PTHR23151:SF9 217 447 1.7E-199 T 14-09-2016 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 SUPERFAMILY SSF47005 131 176 8.5E-13 T 14-09-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 217 447 1.9E-80 T 14-09-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 PANTHER PTHR23151 5 198 1.7E-199 T 14-09-2016 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 PANTHER PTHR23151 217 447 1.7E-199 T 14-09-2016 AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 SUPERFAMILY SSF51230 1 96 5.89E-29 T 14-09-2016 IPR011053 Single hybrid motif AMK01_RS09805 305ea5ba1bc0a71234ebfa6cd5b511cd 448 Gene3D G3DSA:2.40.50.100 2 97 4.2E-33 T 14-09-2016 AMK01_RS04550 a256c9c5a566983a498e58503adbf837 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 191 7.9E-50 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS04550 a256c9c5a566983a498e58503adbf837 193 SMART SM00855 7 151 2.3E-20 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS04550 a256c9c5a566983a498e58503adbf837 193 Gene3D G3DSA:3.40.50.1240 6 192 1.4E-49 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS04550 a256c9c5a566983a498e58503adbf837 193 PANTHER PTHR23029 6 193 9.9E-77 T 14-09-2016 AMK01_RS04550 a256c9c5a566983a498e58503adbf837 193 SUPERFAMILY SSF53254 7 191 7.92E-50 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS04550 a256c9c5a566983a498e58503adbf837 193 PANTHER PTHR23029:SF23 6 193 9.9E-77 T 14-09-2016 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 Gene3D G3DSA:1.10.1040.10 285 487 3.6E-57 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 220 457 7.9E-82 T 14-09-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 221 233 - T 14-09-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 30 191 2.4E-42 T 14-09-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 PANTHER PTHR30562:SF4 17 488 1.8E-136 T 14-09-2016 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 PRINTS PR00084 Mannitol dehydrogenase signature 182 195 2.9E-21 T 14-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 PRINTS PR00084 Mannitol dehydrogenase signature 31 41 2.9E-21 T 14-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 PRINTS PR00084 Mannitol dehydrogenase signature 221 234 2.9E-21 T 14-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 PRINTS PR00084 Mannitol dehydrogenase signature 251 266 2.9E-21 T 14-09-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 SUPERFAMILY SSF51735 5 284 3.27E-94 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 SUPERFAMILY SSF48179 286 488 4.08E-54 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 Gene3D G3DSA:3.40.50.720 8 284 3.8E-104 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19005 8b5526690f40cc6577524b5563e6bdbd 493 PANTHER PTHR30562 17 488 1.8E-136 T 14-09-2016 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 PIRSF PIRSF004491 1 315 3.1E-91 T 14-09-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 SMART SM00904 187 312 1.4E-54 T 14-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 Pfam PF06574 FAD synthetase 16 169 3.9E-51 T 14-09-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 SUPERFAMILY SSF82114 177 312 3.05E-40 T 14-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 Gene3D G3DSA:2.40.30.30 184 312 1.8E-37 T 14-09-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 Gene3D G3DSA:3.40.50.620 11 183 3.9E-57 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 SUPERFAMILY SSF52374 20 183 3.26E-32 T 14-09-2016 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 311 7.5E-76 T 14-09-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 PANTHER PTHR22749 1 311 1.9E-109 T 14-09-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 PANTHER PTHR22749:SF0 1 311 1.9E-109 T 14-09-2016 AMK01_RS04245 55bb4483cc27321877cd8cd7097e3279 327 Pfam PF01687 Riboflavin kinase 188 311 1.5E-33 T 14-09-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK01_RS11745 9ea7a0a8d9e6deeccc6e8c6f0571de78 264 SMART SM00062 29 248 6.2E-47 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS11745 9ea7a0a8d9e6deeccc6e8c6f0571de78 264 Gene3D G3DSA:3.40.190.10 107 183 1.7E-11 T 14-09-2016 AMK01_RS11745 9ea7a0a8d9e6deeccc6e8c6f0571de78 264 PANTHER PTHR18966 23 250 3.4E-98 T 14-09-2016 AMK01_RS11745 9ea7a0a8d9e6deeccc6e8c6f0571de78 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 246 4.4E-50 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS11745 9ea7a0a8d9e6deeccc6e8c6f0571de78 264 SUPERFAMILY SSF53850 2 248 1.49E-54 T 14-09-2016 AMK01_RS11745 9ea7a0a8d9e6deeccc6e8c6f0571de78 264 PANTHER PTHR18966:SF231 23 250 3.4E-98 T 14-09-2016 AMK01_RS11745 9ea7a0a8d9e6deeccc6e8c6f0571de78 264 Gene3D G3DSA:3.40.190.10 26 106 1.0E-36 T 14-09-2016 AMK01_RS11745 9ea7a0a8d9e6deeccc6e8c6f0571de78 264 Gene3D G3DSA:3.40.190.10 207 248 1.0E-36 T 14-09-2016 AMK01_RS12020 51a9712607906bcf6a5749ed36c3f96e 383 Gene3D G3DSA:3.30.750.24 14 100 1.3E-12 T 14-09-2016 IPR002645 STAS domain AMK01_RS12020 51a9712607906bcf6a5749ed36c3f96e 383 SUPERFAMILY SSF52091 17 101 3.53E-13 T 14-09-2016 IPR002645 STAS domain AMK01_RS12020 51a9712607906bcf6a5749ed36c3f96e 383 PANTHER PTHR30188 41 378 1.4E-121 T 14-09-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AMK01_RS12020 51a9712607906bcf6a5749ed36c3f96e 383 Pfam PF13466 STAS domain 24 100 2.0E-11 T 14-09-2016 IPR002645 STAS domain AMK01_RS12020 51a9712607906bcf6a5749ed36c3f96e 383 PANTHER PTHR30188:SF3 41 378 1.4E-121 T 14-09-2016 AMK01_RS12020 51a9712607906bcf6a5749ed36c3f96e 383 Pfam PF02405 Permease MlaE 166 376 7.1E-67 T 14-09-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AMK01_RS12020 51a9712607906bcf6a5749ed36c3f96e 383 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 166 376 2.2E-65 T 14-09-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 PANTHER PTHR10520 6 344 1.5E-211 T 14-09-2016 AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 Gene3D G3DSA:3.30.1330.10 24 172 1.7E-60 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 Pfam PF02769 AIR synthase related protein, C-terminal domain 180 346 4.4E-38 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 9 341 1.4E-136 T 14-09-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 SUPERFAMILY SSF56042 176 345 2.24E-58 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 Gene3D G3DSA:3.90.650.10 177 346 3.9E-67 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 SUPERFAMILY SSF55326 9 172 2.39E-48 T 14-09-2016 AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 166 6.1E-15 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AMK01_RS07580 00c987190f9409bf4f3d8b55ca174457 357 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 9 350 45.374 T 14-09-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS03460 aca51de5dbb06d38add42dc705eaa7d0 316 Gene3D G3DSA:2.30.330.10 224 309 1.4E-8 T 14-09-2016 AMK01_RS03460 aca51de5dbb06d38add42dc705eaa7d0 316 PANTHER PTHR30034 37 312 4.2E-16 T 14-09-2016 AMK01_RS03460 aca51de5dbb06d38add42dc705eaa7d0 316 SUPERFAMILY SSF101801 233 311 4.58E-11 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AMK01_RS03460 aca51de5dbb06d38add42dc705eaa7d0 316 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 233 303 1.5E-16 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 Gene3D G3DSA:3.30.9.10 140 191 8.9E-4 T 14-09-2016 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 Gene3D G3DSA:3.30.9.10 272 313 8.9E-4 T 14-09-2016 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 PANTHER PTHR13847:SF216 111 416 1.7E-51 T 14-09-2016 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 SUPERFAMILY SSF54373 274 359 1.18E-9 T 14-09-2016 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 Gene3D G3DSA:3.50.50.60 192 271 5.6E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 Gene3D G3DSA:3.50.50.60 359 416 5.6E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 Gene3D G3DSA:3.50.50.60 4 63 5.6E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 Gene3D G3DSA:3.50.50.60 112 134 5.6E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 SUPERFAMILY SSF51905 7 59 8.42E-49 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 SUPERFAMILY SSF51905 359 416 8.42E-49 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 SUPERFAMILY SSF51905 109 272 8.42E-49 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 PANTHER PTHR13847 7 62 1.7E-51 T 14-09-2016 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 PANTHER PTHR13847:SF216 7 62 1.7E-51 T 14-09-2016 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 Pfam PF01266 FAD dependent oxidoreductase 8 397 6.8E-52 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS02445 a0bf2d7e2b81c45ec787513dbcb1c4df 416 PANTHER PTHR13847 111 416 1.7E-51 T 14-09-2016 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 432 2.7E-156 T 14-09-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 Gene3D G3DSA:1.10.275.10 2 93 7.4E-33 T 14-09-2016 IPR024083 Fumarase/histidase, N-terminal AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PANTHER PTHR11444:SF2 4 427 4.3E-153 T 14-09-2016 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 Gene3D G3DSA:1.10.40.30 360 432 4.2E-37 T 14-09-2016 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PANTHER PTHR11444 4 427 4.3E-153 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PRINTS PR00145 Argininosuccinate lyase family signature 264 280 4.2E-6 T 14-09-2016 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PRINTS PR00145 Argininosuccinate lyase family signature 219 243 4.2E-6 T 14-09-2016 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PRINTS PR00145 Argininosuccinate lyase family signature 131 151 4.2E-6 T 14-09-2016 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 ProSitePatterns PS00163 Fumarate lyases signature. 264 273 - T 14-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 Gene3D G3DSA:1.20.200.10 94 359 7.2E-90 T 14-09-2016 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 Pfam PF10397 Adenylosuccinate lyase C-terminus 353 431 4.3E-28 T 14-09-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 Pfam PF00206 Lyase 7 287 1.7E-52 T 14-09-2016 IPR022761 Fumarate lyase, N-terminal AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 SMART SM00998 352 432 6.5E-43 T 14-09-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 SUPERFAMILY SSF48557 3 432 5.03E-138 T 14-09-2016 IPR008948 L-Aspartase-like GO:0003824 AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PRINTS PR00149 Fumarate lyase superfamily signature 219 246 8.5E-26 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PRINTS PR00149 Fumarate lyase superfamily signature 91 109 8.5E-26 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 8.5E-26 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS11640 8fb0cad67c0426fdfa51f9cd4d6f0e68 435 PRINTS PR00149 Fumarate lyase superfamily signature 264 280 8.5E-26 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 SUPERFAMILY SSF56349 190 349 7.95E-49 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 SUPERFAMILY SSF56349 39 159 7.95E-49 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 Pfam PF00589 Phage integrase family 191 343 1.4E-18 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 PANTHER PTHR30349 181 371 3.4E-35 T 14-09-2016 AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 PANTHER PTHR30349 35 155 3.4E-35 T 14-09-2016 AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 PANTHER PTHR30349:SF20 181 371 3.4E-35 T 14-09-2016 AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 PANTHER PTHR30349:SF20 35 155 3.4E-35 T 14-09-2016 AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 Gene3D G3DSA:1.10.150.130 40 134 1.1E-7 T 14-09-2016 IPR023109 Integrase/recombinase, N-terminal AMK01_RS27740 9ed99c683b7f6f60451a07aa5d194707 377 Gene3D G3DSA:1.10.443.10 142 349 3.9E-36 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS16200 bb3f4c2269000ecc9b573b46eb00109f 183 PANTHER PTHR13256 6 182 2.3E-41 T 14-09-2016 AMK01_RS16200 bb3f4c2269000ecc9b573b46eb00109f 183 SUPERFAMILY SSF55729 8 179 2.85E-45 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS16200 bb3f4c2269000ecc9b573b46eb00109f 183 Pfam PF13302 Acetyltransferase (GNAT) domain 15 155 1.3E-28 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS16200 bb3f4c2269000ecc9b573b46eb00109f 183 Gene3D G3DSA:3.40.630.30 9 182 9.3E-48 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 SUPERFAMILY SSF46785 11 149 2.0E-31 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 PANTHER PTHR33164 14 150 1.1E-48 T 14-09-2016 AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 4.1E-6 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 76 4.1E-6 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 4.1E-6 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 SMART SM00347 36 134 1.0E-16 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 PANTHER PTHR33164:SF5 14 150 1.1E-48 T 14-09-2016 AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 Gene3D G3DSA:1.10.10.10 15 153 3.4E-38 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13995 5328c073924bdf65d586187b05dff268 156 Pfam PF01047 MarR family 43 101 2.5E-15 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 Pfam PF00771 FHIPEP family 28 686 4.4E-235 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PIRSF PIRSF005419 9 695 1.1E-212 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PANTHER PTHR30161:SF1 1 695 3.0E-258 T 14-09-2016 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PANTHER PTHR30161 1 695 3.0E-258 T 14-09-2016 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 1.2E-50 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 1.2E-50 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 1.2E-50 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 1.2E-50 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 1.2E-50 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 1.2E-50 T 14-09-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AMK01_RS03635 573d538ed5daf5ff79b7360b388a5c0f 695 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 17 694 7.2E-266 T 14-09-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 ProSitePatterns PS00177 DNA topoisomerase II signature. 480 488 - T 14-09-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 53 692 42.799 T 14-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR01159 DNA gyrase subunit B signature 280 302 5.9E-16 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR01159 DNA gyrase subunit B signature 433 453 5.9E-16 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR01159 DNA gyrase subunit B signature 528 537 5.9E-16 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR01159 DNA gyrase subunit B signature 646 658 5.9E-16 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR01159 DNA gyrase subunit B signature 56 66 5.9E-16 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR01159 DNA gyrase subunit B signature 419 433 5.9E-16 T 14-09-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PANTHER PTHR10169:SF20 34 695 1.3E-196 T 14-09-2016 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 329 342 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 582 594 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 120 133 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 164 178 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 478 492 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 625 641 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 85 100 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 544 560 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PRINTS PR00418 DNA topoisomerase II family signature 562 579 2.1E-65 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 55 687 6.2E-226 T 14-09-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 81 226 5.8E-21 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11215 94895841f22df25c180b672d1c452407 695 Pfam PF00204 DNA gyrase B 281 449 5.2E-43 T 14-09-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 Gene3D G3DSA:3.30.230.10 280 453 2.5E-45 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS11215 94895841f22df25c180b672d1c452407 695 SUPERFAMILY SSF55874 56 260 9.95E-60 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11215 94895841f22df25c180b672d1c452407 695 Pfam PF01751 Toprim domain 477 576 4.3E-16 T 14-09-2016 IPR006171 Toprim domain AMK01_RS11215 94895841f22df25c180b672d1c452407 695 SUPERFAMILY SSF54211 281 450 6.07E-43 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS11215 94895841f22df25c180b672d1c452407 695 PANTHER PTHR10169 34 695 1.3E-196 T 14-09-2016 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 621 684 2.4E-24 T 14-09-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 Gene3D G3DSA:3.40.50.670 462 675 2.4E-77 T 14-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 SMART SM00433 85 688 1.7E-282 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS11215 94895841f22df25c180b672d1c452407 695 SMART SM00387 81 227 1.1E-27 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11215 94895841f22df25c180b672d1c452407 695 Gene3D G3DSA:3.30.565.10 56 258 1.7E-75 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS11215 94895841f22df25c180b672d1c452407 695 SUPERFAMILY SSF56719 452 685 5.23E-73 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 SUPERFAMILY SSF55831 1 264 8.64E-130 T 14-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 PANTHER PTHR11548 1 264 2.0E-188 T 14-09-2016 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.454 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-09-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 Gene3D G3DSA:3.30.572.10 1 264 6.8E-131 T 14-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.5E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.5E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.5E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.5E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.5E-49 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 Pfam PF00303 Thymidylate synthase 2 264 5.8E-121 T 14-09-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 8.3E-97 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS14365 2a4c8dfa1de7b600820a543c59f236ac 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 1.5E-41 T 14-09-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK01_RS12685 cc4ba9c16d86af12acdd84a6889dc81d 142 PANTHER PTHR30582 9 141 1.1E-31 T 14-09-2016 AMK01_RS12685 cc4ba9c16d86af12acdd84a6889dc81d 142 Gene3D G3DSA:2.40.440.10 29 140 7.4E-22 T 14-09-2016 AMK01_RS12685 cc4ba9c16d86af12acdd84a6889dc81d 142 SUPERFAMILY SSF141523 27 129 2.09E-26 T 14-09-2016 AMK01_RS12685 cc4ba9c16d86af12acdd84a6889dc81d 142 PANTHER PTHR30582:SF12 9 141 1.1E-31 T 14-09-2016 AMK01_RS12685 cc4ba9c16d86af12acdd84a6889dc81d 142 Pfam PF03734 L,D-transpeptidase catalytic domain 30 140 1.8E-14 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS07555 1cb02cb741ae710bf9912c68e7c781e0 289 Gene3D G3DSA:3.40.50.150 1 282 2.9E-107 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS07555 1cb02cb741ae710bf9912c68e7c781e0 289 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 268 40.31 T 14-09-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMK01_RS07555 1cb02cb741ae710bf9912c68e7c781e0 289 PANTHER PTHR37426:SF1 1 282 1.3E-126 T 14-09-2016 AMK01_RS07555 1cb02cb741ae710bf9912c68e7c781e0 289 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 279 2.4E-87 T 14-09-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMK01_RS07555 1cb02cb741ae710bf9912c68e7c781e0 289 PANTHER PTHR37426 1 282 1.3E-126 T 14-09-2016 AMK01_RS07555 1cb02cb741ae710bf9912c68e7c781e0 289 SUPERFAMILY SSF53335 8 280 8.48E-92 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS06870 234cc8b008a31ec99d1609c8b9480271 371 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 143 210 3.1E-5 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS06870 234cc8b008a31ec99d1609c8b9480271 371 SUPERFAMILY SSF55347 135 317 2.78E-28 T 14-09-2016 AMK01_RS06870 234cc8b008a31ec99d1609c8b9480271 371 PANTHER PTHR22604 1 370 8.3E-73 T 14-09-2016 AMK01_RS06870 234cc8b008a31ec99d1609c8b9480271 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 130 4.9E-28 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS06870 234cc8b008a31ec99d1609c8b9480271 371 SUPERFAMILY SSF51735 2 160 3.32E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06870 234cc8b008a31ec99d1609c8b9480271 371 Gene3D G3DSA:3.40.50.720 1 141 1.4E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06870 234cc8b008a31ec99d1609c8b9480271 371 Gene3D G3DSA:3.30.360.10 142 366 7.0E-31 T 14-09-2016 AMK01_RS06870 234cc8b008a31ec99d1609c8b9480271 371 PANTHER PTHR22604:SF123 1 370 8.3E-73 T 14-09-2016 AMK01_RS05195 de7f0dad828eef8c2357a26c530d37d3 378 PANTHER PTHR13504:SF32 17 378 1.5E-41 T 14-09-2016 AMK01_RS05195 de7f0dad828eef8c2357a26c530d37d3 378 Pfam PF13784 Fic/DOC family N-terminal 34 117 2.0E-21 T 14-09-2016 IPR025758 Fic/DOC N-terminal AMK01_RS05195 de7f0dad828eef8c2357a26c530d37d3 378 PANTHER PTHR13504 17 378 1.5E-41 T 14-09-2016 AMK01_RS05195 de7f0dad828eef8c2357a26c530d37d3 378 Pfam PF02661 Fic/DOC family 127 229 1.0E-18 T 14-09-2016 IPR003812 Fido domain AMK01_RS05195 de7f0dad828eef8c2357a26c530d37d3 378 SUPERFAMILY SSF140931 105 297 1.83E-36 T 14-09-2016 IPR003812 Fido domain AMK01_RS05195 de7f0dad828eef8c2357a26c530d37d3 378 PIRSF PIRSF038925 7 378 7.4E-100 T 14-09-2016 IPR026287 Adenosine monophosphate-protein transferase AMK01_RS05195 de7f0dad828eef8c2357a26c530d37d3 378 Gene3D G3DSA:1.10.3290.10 36 300 1.5E-54 T 14-09-2016 IPR003812 Fido domain AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 Gene3D G3DSA:3.40.50.20 1 129 5.6E-51 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 SMART SM00878 335 440 1.4E-61 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.5E-45 T 14-09-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 1.1E-212 T 14-09-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 SUPERFAMILY SSF52440 1 113 2.01E-48 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 SUPERFAMILY SSF56059 83 347 8.08E-69 T 14-09-2016 AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 Gene3D G3DSA:3.30.470.20 205 442 5.1E-93 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 Pfam PF02785 Biotin carboxylase C-terminal domain 335 440 5.7E-38 T 14-09-2016 IPR005482 Biotin carboxylase, C-terminal AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 SUPERFAMILY SSF51246 330 443 4.29E-42 T 14-09-2016 IPR011054 Rudiment single hybrid motif AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 1.6E-77 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 PANTHER PTHR18866 1 444 4.2E-287 T 14-09-2016 AMK01_RS09460 a5e25424279ad3d3e85a512d2f3e8eb7 449 Gene3D G3DSA:3.30.1490.20 130 202 2.7E-30 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 PANTHER PTHR24220:SF446 5 297 5.7E-155 T 14-09-2016 AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 SUPERFAMILY SSF50331 236 370 1.73E-24 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 SUPERFAMILY SSF52540 3 243 3.5E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 PANTHER PTHR24220 5 297 5.7E-155 T 14-09-2016 AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 Pfam PF00005 ABC transporter 19 161 3.0E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 Gene3D G3DSA:3.40.50.300 3 233 5.7E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 Gene3D G3DSA:2.40.50.100 239 290 5.2E-11 T 14-09-2016 AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 Gene3D G3DSA:2.40.50.100 356 371 5.2E-11 T 14-09-2016 AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 SMART SM00382 28 210 6.6E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS08695 bc6bed43e5626a5e2e97bea7ddbc3541 371 Gene3D G3DSA:2.40.50.140 291 354 2.8E-10 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS01255 329bfb05ce68d17fd49d403cf6fbb46b 331 Pfam PF03576 Peptidase family S58 6 316 2.0E-53 T 14-09-2016 IPR005321 Peptidase S58, DmpA AMK01_RS01255 329bfb05ce68d17fd49d403cf6fbb46b 331 SUPERFAMILY SSF56266 2 314 1.1E-65 T 14-09-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK01_RS01255 329bfb05ce68d17fd49d403cf6fbb46b 331 PANTHER PTHR36512 1 327 4.8E-92 T 14-09-2016 AMK01_RS01255 329bfb05ce68d17fd49d403cf6fbb46b 331 Gene3D G3DSA:3.60.70.12 5 316 1.6E-76 T 14-09-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK01_RS01255 329bfb05ce68d17fd49d403cf6fbb46b 331 PANTHER PTHR36512:SF3 1 327 4.8E-92 T 14-09-2016 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 SMART SM00382 165 308 6.3E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 Gene3D G3DSA:1.10.8.60 318 379 5.9E-21 T 14-09-2016 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 5.6E-6 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 Gene3D G3DSA:3.40.50.2300 7 128 4.6E-32 T 14-09-2016 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 Gene3D G3DSA:3.40.50.300 144 317 8.2E-51 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 SUPERFAMILY SSF46689 384 440 4.48E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 Pfam PF00072 Response regulator receiver domain 7 116 2.0E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 Gene3D G3DSA:1.10.10.60 387 440 2.2E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 14-09-2016 IPR025944 Sigma-54 interaction domain, conserved site AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 PANTHER PTHR32071 5 448 2.2E-213 T 14-09-2016 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 Pfam PF00158 Sigma-54 interaction domain 145 311 6.5E-64 T 14-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 PANTHER PTHR32071:SF11 5 448 2.2E-213 T 14-09-2016 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 14-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 SUPERFAMILY SSF52172 6 190 1.04E-37 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 SUPERFAMILY SSF52540 145 374 1.35E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15205 0bc4ff878afe1cc77314f26cc858d59c 448 SMART SM00448 5 116 1.8E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 Pfam PF00364 Biotin-requiring enzyme 84 157 1.8E-21 T 14-09-2016 IPR000089 Biotin/lipoyl attachment AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 PANTHER PTHR23151 13 158 4.5E-33 T 14-09-2016 AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 Gene3D G3DSA:2.40.50.100 83 158 5.8E-30 T 14-09-2016 AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 114 131 - T 14-09-2016 IPR001882 Biotin-binding site AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 119 132 1.5E-12 T 14-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 87 100 1.5E-12 T 14-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 104 118 1.5E-12 T 14-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 SUPERFAMILY SSF51230 83 158 6.41E-24 T 14-09-2016 IPR011053 Single hybrid motif AMK01_RS09465 23ef9788b88144a3d296f07ef850514d 158 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 12 158 1.3E-41 T 14-09-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK01_RS10880 6dcadb85f38b64bffac0fd72652cd6d7 168 Gene3D G3DSA:1.10.10.10 2 107 2.6E-33 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10880 6dcadb85f38b64bffac0fd72652cd6d7 168 SUPERFAMILY SSF46785 5 141 2.73E-36 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10880 6dcadb85f38b64bffac0fd72652cd6d7 168 PANTHER PTHR33204 1 160 2.3E-63 T 14-09-2016 AMK01_RS10880 6dcadb85f38b64bffac0fd72652cd6d7 168 PANTHER PTHR33204:SF10 1 160 2.3E-63 T 14-09-2016 AMK01_RS10880 6dcadb85f38b64bffac0fd72652cd6d7 168 Pfam PF01638 HxlR-like helix-turn-helix 20 107 1.4E-22 T 14-09-2016 IPR002577 Helix-turn-helix, HxlR type AMK01_RS05895 525f897f9ffe64d38cb3d9ae83922261 206 SUPERFAMILY SSF52833 1 83 4.58E-20 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05895 525f897f9ffe64d38cb3d9ae83922261 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 9.3E-16 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS05895 525f897f9ffe64d38cb3d9ae83922261 206 Gene3D G3DSA:1.20.1050.10 90 194 9.7E-22 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS05895 525f897f9ffe64d38cb3d9ae83922261 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 123 195 1.9E-6 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AMK01_RS05895 525f897f9ffe64d38cb3d9ae83922261 206 SUPERFAMILY SSF47616 81 203 4.55E-20 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS05895 525f897f9ffe64d38cb3d9ae83922261 206 Gene3D G3DSA:3.40.30.10 2 89 4.3E-26 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05895 525f897f9ffe64d38cb3d9ae83922261 206 PANTHER PTHR11260:SF178 2 201 4.0E-34 T 14-09-2016 AMK01_RS05895 525f897f9ffe64d38cb3d9ae83922261 206 PANTHER PTHR11260 2 201 4.0E-34 T 14-09-2016 AMK01_RS17835 90b8b3f7c6d60ccb76fca7b244a73173 392 PANTHER PTHR21152:SF23 6 383 1.7E-170 T 14-09-2016 AMK01_RS17835 90b8b3f7c6d60ccb76fca7b244a73173 392 PIRSF PIRSF000525 19 384 2.0E-53 T 14-09-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 AMK01_RS17835 90b8b3f7c6d60ccb76fca7b244a73173 392 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 10 382 3.8E-211 T 14-09-2016 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 AMK01_RS17835 90b8b3f7c6d60ccb76fca7b244a73173 392 Pfam PF00266 Aminotransferase class-V 140 316 1.2E-6 T 14-09-2016 IPR000192 Aminotransferase class V domain AMK01_RS17835 90b8b3f7c6d60ccb76fca7b244a73173 392 PANTHER PTHR21152 6 383 1.7E-170 T 14-09-2016 AMK01_RS17835 90b8b3f7c6d60ccb76fca7b244a73173 392 Gene3D G3DSA:3.40.640.10 28 266 7.5E-49 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS17835 90b8b3f7c6d60ccb76fca7b244a73173 392 SUPERFAMILY SSF53383 11 381 4.68E-73 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PIRSF PIRSF000099 3 430 1.4E-160 T 14-09-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 427 3.9E-157 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 Gene3D G3DSA:3.40.50.1980 28 240 4.9E-78 T 14-09-2016 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 Pfam PF00815 Histidinol dehydrogenase 23 428 6.4E-164 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 14-09-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 428 41.419 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 SUPERFAMILY SSF53720 26 429 2.16E-79 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 2.6E-85 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 2.6E-85 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 2.6E-85 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.6E-85 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 2.6E-85 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.6E-85 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 2.6E-85 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 2.6E-85 T 14-09-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 AMK01_RS03085 cb743d60667785d008fe9828511de6a7 431 PANTHER PTHR21256 1 431 4.7E-198 T 14-09-2016 AMK01_RS12285 13c259e560a0878013e87398e9b3624f 302 PANTHER PTHR22911:SF70 9 284 6.1E-41 T 14-09-2016 AMK01_RS12285 13c259e560a0878013e87398e9b3624f 302 SUPERFAMILY SSF103481 45 144 8.5E-13 T 14-09-2016 AMK01_RS12285 13c259e560a0878013e87398e9b3624f 302 Pfam PF00892 EamA-like transporter family 9 140 1.6E-10 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS12285 13c259e560a0878013e87398e9b3624f 302 Pfam PF00892 EamA-like transporter family 150 280 2.4E-6 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS12285 13c259e560a0878013e87398e9b3624f 302 SUPERFAMILY SSF103481 193 285 1.44E-11 T 14-09-2016 AMK01_RS12285 13c259e560a0878013e87398e9b3624f 302 PANTHER PTHR22911 9 284 6.1E-41 T 14-09-2016 AMK01_RS05385 2e69562bd6ec53895dcf6fadf1ba263a 259 SUPERFAMILY SSF53474 30 128 5.41E-27 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS05385 2e69562bd6ec53895dcf6fadf1ba263a 259 SUPERFAMILY SSF53474 157 254 5.41E-27 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS05385 2e69562bd6ec53895dcf6fadf1ba263a 259 PANTHER PTHR10992:SF832 35 258 5.2E-32 T 14-09-2016 AMK01_RS05385 2e69562bd6ec53895dcf6fadf1ba263a 259 Pfam PF12697 Alpha/beta hydrolase family 39 250 2.9E-16 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS05385 2e69562bd6ec53895dcf6fadf1ba263a 259 PANTHER PTHR10992 35 258 5.2E-32 T 14-09-2016 AMK01_RS05385 2e69562bd6ec53895dcf6fadf1ba263a 259 Gene3D G3DSA:3.40.50.1820 38 256 5.6E-28 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS19785 b614cfd9a5ecd3b4e28379d6c43a0101 623 Pfam PF07244 Surface antigen variable number repeat 224 296 2.1E-6 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AMK01_RS19785 b614cfd9a5ecd3b4e28379d6c43a0101 623 Pfam PF01103 Surface antigen 323 623 5.2E-59 T 14-09-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AMK01_RS19785 b614cfd9a5ecd3b4e28379d6c43a0101 623 Gene3D G3DSA:2.40.160.50 302 623 5.4E-40 T 14-09-2016 AMK01_RS19785 b614cfd9a5ecd3b4e28379d6c43a0101 623 PANTHER PTHR12815:SF11 133 623 4.7E-60 T 14-09-2016 AMK01_RS19785 b614cfd9a5ecd3b4e28379d6c43a0101 623 PANTHER PTHR12815 133 623 4.7E-60 T 14-09-2016 AMK01_RS13015 9fc8d904661b2ce33523ca7cdfeb66da 330 Gene3D G3DSA:3.40.50.10440 11 180 2.6E-64 T 14-09-2016 AMK01_RS13015 9fc8d904661b2ce33523ca7cdfeb66da 330 SUPERFAMILY SSF82549 11 329 2.62E-108 T 14-09-2016 AMK01_RS13015 9fc8d904661b2ce33523ca7cdfeb66da 330 Pfam PF02733 Dak1 domain 17 325 7.0E-113 T 14-09-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 AMK01_RS13015 9fc8d904661b2ce33523ca7cdfeb66da 330 PANTHER PTHR28629:SF2 1 329 6.7E-132 T 14-09-2016 AMK01_RS13015 9fc8d904661b2ce33523ca7cdfeb66da 330 Gene3D G3DSA:3.30.1180.20 184 329 1.8E-48 T 14-09-2016 AMK01_RS13015 9fc8d904661b2ce33523ca7cdfeb66da 330 PANTHER PTHR28629 1 329 6.7E-132 T 14-09-2016 AMK01_RS01745 415c07e2c04a6df7bf2b79fa8af4bc18 326 PANTHER PTHR12126:SF1 7 319 2.0E-92 T 14-09-2016 AMK01_RS01745 415c07e2c04a6df7bf2b79fa8af4bc18 326 SUPERFAMILY SSF51735 10 268 2.76E-56 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01745 415c07e2c04a6df7bf2b79fa8af4bc18 326 Gene3D G3DSA:3.40.50.720 10 233 2.8E-53 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01745 415c07e2c04a6df7bf2b79fa8af4bc18 326 PANTHER PTHR12126 7 319 2.0E-92 T 14-09-2016 AMK01_RS01745 415c07e2c04a6df7bf2b79fa8af4bc18 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 218 7.3E-15 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 Gene3D G3DSA:3.30.70.890 173 288 2.5E-28 T 14-09-2016 IPR013750 GHMP kinase, C-terminal domain AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 PIRSF PIRSF010376 11 293 1.5E-82 T 14-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 Pfam PF08544 GHMP kinases C terminal 221 277 9.2E-8 T 14-09-2016 IPR013750 GHMP kinase, C-terminal domain AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 Gene3D G3DSA:3.30.230.10 13 170 2.7E-44 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 SUPERFAMILY SSF54211 13 168 5.69E-36 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 PANTHER PTHR20861:SF2 18 290 3.1E-73 T 14-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 Pfam PF00288 GHMP kinases N terminal domain 98 153 1.2E-8 T 14-09-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 273 2.6E-56 T 14-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 SUPERFAMILY SSF55060 172 287 3.6E-26 T 14-09-2016 IPR013750 GHMP kinase, C-terminal domain AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 PANTHER PTHR20861 18 290 3.1E-73 T 14-09-2016 AMK01_RS04450 ce0da4a65f0eb866bead4c8cc7cf14e1 294 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 12 289 31.715 T 14-09-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 21 348 2.3E-114 T 14-09-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 SMART SM00729 30 228 4.9E-7 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 36 47 - T 14-09-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 Gene3D G3DSA:3.20.20.70 20 324 8.8E-77 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 PANTHER PTHR22960 21 299 1.4E-111 T 14-09-2016 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 Pfam PF06463 Molybdenum Cofactor Synthesis C 201 327 2.5E-41 T 14-09-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 21 348 39.526 T 14-09-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 Pfam PF13353 4Fe-4S single cluster domain 37 127 1.3E-9 T 14-09-2016 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 SUPERFAMILY SSF102114 20 293 3.01E-78 T 14-09-2016 AMK01_RS12210 c65f16dc66d052246009fce4ee01ec49 348 Pfam PF04055 Radical SAM superfamily 34 195 9.0E-29 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS14115 88a8a15400ad6d055366c8312dcaaac3 242 Gene3D G3DSA:3.20.20.190 2 241 2.6E-48 T 14-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMK01_RS14115 88a8a15400ad6d055366c8312dcaaac3 242 PANTHER PTHR23344 1 239 7.4E-39 T 14-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 AMK01_RS14115 88a8a15400ad6d055366c8312dcaaac3 242 PANTHER PTHR23344:SF28 1 239 7.4E-39 T 14-09-2016 AMK01_RS14115 88a8a15400ad6d055366c8312dcaaac3 242 SUPERFAMILY SSF51695 2 241 9.94E-46 T 14-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMK01_RS14115 88a8a15400ad6d055366c8312dcaaac3 242 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 175 1.7E-20 T 14-09-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMK01_RS11065 8345f118d9c0ab1a82d8b7f06dfe820d 340 PANTHER PTHR11669:SF8 13 232 1.3E-44 T 14-09-2016 AMK01_RS11065 8345f118d9c0ab1a82d8b7f06dfe820d 340 SUPERFAMILY SSF52540 21 231 4.68E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11065 8345f118d9c0ab1a82d8b7f06dfe820d 340 Pfam PF13177 DNA polymerase III, delta subunit 24 196 2.1E-39 T 14-09-2016 AMK01_RS11065 8345f118d9c0ab1a82d8b7f06dfe820d 340 Gene3D G3DSA:3.40.50.300 20 195 2.5E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11065 8345f118d9c0ab1a82d8b7f06dfe820d 340 PANTHER PTHR11669 13 232 1.3E-44 T 14-09-2016 AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PANTHER PTHR24322 155 187 2.8E-55 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 Gene3D G3DSA:3.40.50.720 6 246 1.9E-82 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 SUPERFAMILY SSF51735 7 246 1.92E-81 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.4E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.4E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.4E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 2.5E-60 T 14-09-2016 AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.4E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.4E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.4E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.4E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.4E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.4E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 186 0.0014 T 14-09-2016 AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PANTHER PTHR24322 12 139 2.8E-55 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PANTHER PTHR24322:SF608 155 187 2.8E-55 T 14-09-2016 AMK01_RS17235 535fd8668725c34d4a1e5c382b461d31 247 PANTHER PTHR24322:SF608 12 139 2.8E-55 T 14-09-2016 AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 Pfam PF01047 MarR family 41 97 3.8E-14 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.6E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 2.6E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.6E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 PANTHER PTHR33164 17 154 3.9E-18 T 14-09-2016 AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 SUPERFAMILY SSF46785 9 148 2.37E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 Gene3D G3DSA:1.10.10.10 10 141 8.0E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 14-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK01_RS12195 902f3a24203e0e5430b6bca16b87b4be 155 SMART SM00347 33 130 9.5E-17 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 Pfam PF05974 Domain of unknown function (DUF892) 259 414 1.7E-49 T 14-09-2016 IPR010287 Domain of unknown function DUF892 AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 Pfam PF05067 Manganese containing catalase 1 254 1.2E-63 T 14-09-2016 IPR007760 Manganese catalase AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 SUPERFAMILY SSF47240 1 237 1.84E-81 T 14-09-2016 IPR009078 Ferritin-like superfamily AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 PANTHER PTHR30565:SF2 259 422 2.7E-144 T 14-09-2016 AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 Gene3D G3DSA:1.20.1260.10 1 182 4.3E-67 T 14-09-2016 IPR012347 Ferritin-related AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 PANTHER PTHR30565 2 179 2.7E-144 T 14-09-2016 AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 Gene3D G3DSA:1.20.1260.10 257 415 9.8E-55 T 14-09-2016 IPR012347 Ferritin-related AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 PANTHER PTHR30565:SF2 2 179 2.7E-144 T 14-09-2016 AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 PANTHER PTHR30565 259 422 2.7E-144 T 14-09-2016 AMK01_RS02505 41e3cca94f0e7a0db516a27b7fb001da 425 SUPERFAMILY SSF47240 258 409 2.84E-42 T 14-09-2016 IPR009078 Ferritin-like superfamily AMK01_RS00215 9d055186aea3c119661d7766a8894fb6 262 PANTHER PTHR21235 3 262 3.8E-114 T 14-09-2016 AMK01_RS00215 9d055186aea3c119661d7766a8894fb6 262 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 260 5.2E-105 T 14-09-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 AMK01_RS00215 9d055186aea3c119661d7766a8894fb6 262 Pfam PF00977 Histidine biosynthesis protein 6 244 1.1E-88 T 14-09-2016 IPR006062 Histidine biosynthesis GO:0000105 AMK01_RS00215 9d055186aea3c119661d7766a8894fb6 262 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 260 45.983 T 14-09-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 AMK01_RS00215 9d055186aea3c119661d7766a8894fb6 262 PANTHER PTHR21235:SF2 3 262 3.8E-114 T 14-09-2016 AMK01_RS00215 9d055186aea3c119661d7766a8894fb6 262 Gene3D G3DSA:3.20.20.70 6 261 1.5E-103 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS00215 9d055186aea3c119661d7766a8894fb6 262 SUPERFAMILY SSF51366 4 260 2.83E-82 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK01_RS05780 ca3fefb3cf0b5df47da37aea36363615 288 PANTHER PTHR30537 3 286 2.3E-51 T 14-09-2016 AMK01_RS05780 ca3fefb3cf0b5df47da37aea36363615 288 Gene3D G3DSA:1.10.10.10 9 89 5.3E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05780 ca3fefb3cf0b5df47da37aea36363615 288 Pfam PF03466 LysR substrate binding domain 95 286 8.3E-26 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS05780 ca3fefb3cf0b5df47da37aea36363615 288 SUPERFAMILY SSF46785 8 117 3.35E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05780 ca3fefb3cf0b5df47da37aea36363615 288 SUPERFAMILY SSF53850 96 287 3.08E-27 T 14-09-2016 AMK01_RS05780 ca3fefb3cf0b5df47da37aea36363615 288 PANTHER PTHR30537:SF3 3 286 2.3E-51 T 14-09-2016 AMK01_RS05780 ca3fefb3cf0b5df47da37aea36363615 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 4.8E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS05780 ca3fefb3cf0b5df47da37aea36363615 288 Gene3D G3DSA:3.40.190.10 99 184 2.1E-13 T 14-09-2016 AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 Pfam PF07729 FCD domain 89 214 2.4E-21 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 Gene3D G3DSA:1.20.120.530 82 221 1.3E-26 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 SUPERFAMILY SSF48008 84 219 5.75E-24 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 Gene3D G3DSA:1.10.10.10 7 80 3.6E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 SUPERFAMILY SSF46785 18 83 6.11E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 SMART SM00895 89 215 1.8E-18 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 3.5E-15 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 SMART SM00345 21 79 1.2E-12 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14945 cf7d628c172f35b420fb10f2b88296b8 236 PANTHER PTHR11751 20 105 3.9E-20 T 14-09-2016 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 90.519 T 14-09-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 Gene3D G3DSA:1.10.40.30 405 463 7.6E-30 T 14-09-2016 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 Pfam PF10415 Fumarase C C-terminus 408 461 3.0E-23 T 14-09-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 Gene3D G3DSA:1.20.200.10 139 403 4.9E-104 T 14-09-2016 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 Pfam PF00206 Lyase 12 342 1.7E-110 T 14-09-2016 IPR022761 Fumarate lyase, N-terminal AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PANTHER PTHR11444:SF1 1 463 1.6E-248 T 14-09-2016 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 14-09-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 9.5E-5 T 14-09-2016 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 9.5E-5 T 14-09-2016 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PRINTS PR00145 Argininosuccinate lyase family signature 133 155 9.5E-5 T 14-09-2016 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 Gene3D G3DSA:1.10.275.10 3 138 2.7E-60 T 14-09-2016 IPR024083 Fumarase/histidase, N-terminal AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PANTHER PTHR11444 1 463 1.6E-248 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 8.4E-223 T 14-09-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 3.7E-32 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.7E-32 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.7E-32 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.7E-32 T 14-09-2016 IPR000362 Fumarate lyase family AMK01_RS12165 d7ab3841d6b2030bf8a095da22ad19d2 463 SUPERFAMILY SSF48557 4 462 5.65E-154 T 14-09-2016 IPR008948 L-Aspartase-like GO:0003824 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 270 425 8.0E-45 T 14-09-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 PANTHER PTHR30560:SF3 1 443 2.6E-101 T 14-09-2016 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 SUPERFAMILY SSF54534 107 248 1.75E-34 T 14-09-2016 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 Gene3D G3DSA:3.30.70.1050 1 126 1.7E-30 T 14-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 165 245 8.9E-17 T 14-09-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 Gene3D G3DSA:3.10.50.40 160 222 3.1E-9 T 14-09-2016 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 PANTHER PTHR30560 1 443 2.6E-101 T 14-09-2016 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 PIRSF PIRSF003095 1 447 8.8E-135 T 14-09-2016 IPR005215 Trigger factor GO:0015031 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 Gene3D G3DSA:1.10.3120.10 223 400 6.4E-56 T 14-09-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 Pfam PF05697 Bacterial trigger factor protein (TF) 1 149 1.6E-34 T 14-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 SUPERFAMILY SSF109998 256 441 3.04E-46 T 14-09-2016 IPR027304 Trigger factor/SurA domain AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 TIGRFAM TIGR00115 tig: trigger factor 11 425 7.1E-128 T 14-09-2016 IPR005215 Trigger factor GO:0015031 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 Hamap MF_00303 Trigger factor [tig]. 1 436 20.554 T 14-09-2016 IPR005215 Trigger factor GO:0015031 AMK01_RS09310 6f02097dbb7a35c17d9b1499355e35f3 494 SUPERFAMILY SSF102735 1 138 2.49E-32 T 14-09-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 Gene3D G3DSA:3.40.190.10 167 232 4.0E-14 T 14-09-2016 AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 14-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 SMART SM00062 29 278 2.1E-44 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 275 4.2E-77 T 14-09-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 Gene3D G3DSA:3.40.190.10 27 166 1.5E-40 T 14-09-2016 AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 PANTHER PTHR18966:SF152 15 275 7.1E-42 T 14-09-2016 AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 276 5.5E-53 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 SUPERFAMILY SSF53850 6 276 4.25E-57 T 14-09-2016 AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 PANTHER PTHR18966 15 275 7.1E-42 T 14-09-2016 AMK01_RS10990 8b8be54185bd456a6e99ec592a8c828e 280 SMART SM00079 29 277 0.0021 T 14-09-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMK01_RS14035 c8f3bb8d9011009853326d87a3bfc96e 195 Pfam PF08241 Methyltransferase domain 43 132 2.9E-12 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK01_RS14035 c8f3bb8d9011009853326d87a3bfc96e 195 PANTHER PTHR10108:SF925 9 136 4.7E-18 T 14-09-2016 AMK01_RS14035 c8f3bb8d9011009853326d87a3bfc96e 195 SUPERFAMILY SSF53335 9 184 3.44E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14035 c8f3bb8d9011009853326d87a3bfc96e 195 Gene3D G3DSA:3.40.50.150 8 191 6.3E-30 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14035 c8f3bb8d9011009853326d87a3bfc96e 195 PANTHER PTHR10108 9 136 4.7E-18 T 14-09-2016 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 14-09-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 Pfam PF13534 4Fe-4S dicluster domain 169 242 2.9E-9 T 14-09-2016 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 SUPERFAMILY SSF46548 130 257 9.42E-37 T 14-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 Gene3D G3DSA:3.10.20.30 22 128 7.9E-40 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 PANTHER PTHR11921:SF27 19 259 2.1E-182 T 14-09-2016 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 251 7.3E-80 T 14-09-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 PANTHER PTHR11921 19 259 2.1E-182 T 14-09-2016 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 Gene3D G3DSA:1.10.1060.10 130 257 2.0E-50 T 14-09-2016 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 SUPERFAMILY SSF54292 27 128 1.16E-29 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK01_RS20030 9e06af8efc40180e450ab683db6601c7 259 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 30 133 2.0E-30 T 14-09-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 AMK01_RS07425 d4f349f3333407c778ef1df1a39b1df4 342 PANTHER PTHR30004 3 334 9.4E-134 T 14-09-2016 AMK01_RS07425 d4f349f3333407c778ef1df1a39b1df4 342 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 335 36.09 T 14-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AMK01_RS07425 d4f349f3333407c778ef1df1a39b1df4 342 Gene3D G3DSA:3.40.718.10 7 336 6.2E-124 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK01_RS07425 d4f349f3333407c778ef1df1a39b1df4 342 SUPERFAMILY SSF53659 7 335 1.41E-108 T 14-09-2016 AMK01_RS07425 d4f349f3333407c778ef1df1a39b1df4 342 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 334 1.6E-122 T 14-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AMK01_RS07425 d4f349f3333407c778ef1df1a39b1df4 342 PANTHER PTHR30004:SF6 3 334 9.4E-134 T 14-09-2016 AMK01_RS07425 d4f349f3333407c778ef1df1a39b1df4 342 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 40 331 5.2E-101 T 14-09-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 AMK01_RS19040 a319d653de901bd0d3f0dd79d725ad40 305 SUPERFAMILY SSF53067 1 299 4.93E-48 T 14-09-2016 AMK01_RS19040 a319d653de901bd0d3f0dd79d725ad40 305 PANTHER PTHR18964:SF123 1 296 7.1E-47 T 14-09-2016 AMK01_RS19040 a319d653de901bd0d3f0dd79d725ad40 305 Pfam PF00480 ROK family 3 296 2.2E-46 T 14-09-2016 IPR000600 ROK family AMK01_RS19040 a319d653de901bd0d3f0dd79d725ad40 305 Gene3D G3DSA:3.30.420.40 129 280 2.3E-36 T 14-09-2016 AMK01_RS19040 a319d653de901bd0d3f0dd79d725ad40 305 PANTHER PTHR18964 1 296 7.1E-47 T 14-09-2016 AMK01_RS19040 a319d653de901bd0d3f0dd79d725ad40 305 Gene3D G3DSA:3.30.420.40 1 128 1.2E-32 T 14-09-2016 AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 Pfam PF00664 ABC transporter transmembrane region 42 293 5.9E-11 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 SUPERFAMILY SSF52540 360 569 4.95E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 SUPERFAMILY SSF90123 26 331 6.8E-26 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 Pfam PF00005 ABC transporter 386 532 1.3E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 Gene3D G3DSA:1.20.1560.10 25 297 3.1E-21 T 14-09-2016 AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 Gene3D G3DSA:3.40.50.300 366 569 3.8E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 SMART SM00382 393 578 2.7E-20 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 PANTHER PTHR24221 91 563 3.1E-91 T 14-09-2016 AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 PANTHER PTHR24221 24 73 3.1E-91 T 14-09-2016 AMK01_RS16515 440746dfebcce1a1516b817cdbbd0a57 587 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS15665 58fdde8bada05d146540e5e7a7355cc0 138 SUPERFAMILY SSF56935 7 138 1.17E-18 T 14-09-2016 AMK01_RS15665 58fdde8bada05d146540e5e7a7355cc0 138 PANTHER PTHR32552:SF18 5 138 4.6E-18 T 14-09-2016 AMK01_RS15665 58fdde8bada05d146540e5e7a7355cc0 138 Pfam PF00593 TonB dependent receptor 7 135 9.0E-10 T 14-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMK01_RS15665 58fdde8bada05d146540e5e7a7355cc0 138 PANTHER PTHR32552 5 138 4.6E-18 T 14-09-2016 AMK01_RS15665 58fdde8bada05d146540e5e7a7355cc0 138 Gene3D G3DSA:2.40.170.20 5 138 2.9E-23 T 14-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 SMART SM00418 12 95 0.0083 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 Gene3D G3DSA:3.30.70.920 64 137 2.3E-14 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 3.2E-17 T 14-09-2016 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 Pfam PF01037 Lrp/AsnC ligand binding domain 78 143 2.4E-11 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 Gene3D G3DSA:1.10.10.10 8 63 3.5E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 1.0E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 1.0E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 1.0E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 PANTHER PTHR30154 4 145 2.0E-38 T 14-09-2016 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 14-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 SMART SM00344 11 117 1.5E-35 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 SUPERFAMILY SSF46785 10 98 1.37E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 PANTHER PTHR30154:SF2 4 145 2.0E-38 T 14-09-2016 AMK01_RS03540 a69dd4738e044e085ddbddded3f8d5f6 158 SUPERFAMILY SSF54909 72 144 8.31E-13 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS01420 ae7247776882f6e63fc3ae0f35ec47fc 232 PANTHER PTHR20858:SF20 14 191 1.7E-48 T 14-09-2016 AMK01_RS01420 ae7247776882f6e63fc3ae0f35ec47fc 232 Gene3D G3DSA:1.20.910.10 12 231 2.6E-69 T 14-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMK01_RS01420 ae7247776882f6e63fc3ae0f35ec47fc 232 PANTHER PTHR20858 14 191 1.7E-48 T 14-09-2016 AMK01_RS01420 ae7247776882f6e63fc3ae0f35ec47fc 232 SUPERFAMILY SSF48613 10 225 4.75E-67 T 14-09-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 AMK01_RS01420 ae7247776882f6e63fc3ae0f35ec47fc 232 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 26 226 1.9E-40 T 14-09-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK01_RS01420 ae7247776882f6e63fc3ae0f35ec47fc 232 Pfam PF03070 TENA/THI-4/PQQC family 19 226 3.9E-41 T 14-09-2016 IPR004305 Thiaminase-2/PQQC AMK01_RS06975 e280e19e9d7764dfe9ee41c979701b28 367 Gene3D G3DSA:3.40.640.10 12 243 2.4E-89 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS06975 e280e19e9d7764dfe9ee41c979701b28 367 PANTHER PTHR30244:SF15 1 366 9.3E-131 T 14-09-2016 AMK01_RS06975 e280e19e9d7764dfe9ee41c979701b28 367 PIRSF PIRSF000390 1 367 6.6E-115 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS06975 e280e19e9d7764dfe9ee41c979701b28 367 SUPERFAMILY SSF53383 9 364 3.23E-119 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS06975 e280e19e9d7764dfe9ee41c979701b28 367 PANTHER PTHR30244 1 366 9.3E-131 T 14-09-2016 AMK01_RS06975 e280e19e9d7764dfe9ee41c979701b28 367 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 361 3.8E-127 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS06975 e280e19e9d7764dfe9ee41c979701b28 367 Gene3D G3DSA:3.90.1150.10 245 364 5.8E-37 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 Pfam PF03144 Elongation factor Tu domain 2 306 372 3.0E-9 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 Gene3D G3DSA:3.30.70.870 387 456 1.3E-11 T 14-09-2016 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 379 505 4.7E-40 T 14-09-2016 IPR032090 Peptide chain release factor 3, C-terminal AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 158 1.8E-23 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 SUPERFAMILY SSF54980 385 456 1.51E-13 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 SUPERFAMILY SSF52540 9 269 3.36E-83 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PRINTS PR00315 GTP-binding elongation factor signature 100 111 6.9E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PRINTS PR00315 GTP-binding elongation factor signature 64 72 6.9E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PRINTS PR00315 GTP-binding elongation factor signature 136 145 6.9E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PRINTS PR00315 GTP-binding elongation factor signature 84 94 6.9E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.9E-13 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 Pfam PF00009 Elongation factor Tu GTP binding domain 12 269 4.8E-51 T 14-09-2016 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 SUPERFAMILY SSF50447 254 385 1.7E-26 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 520 3.3E-195 T 14-09-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 519 48.266 T 14-09-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 Gene3D G3DSA:3.40.50.300 8 274 1.1E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PANTHER PTHR23115:SF69 243 456 1.6E-212 T 14-09-2016 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PANTHER PTHR23115:SF69 1 183 1.6E-212 T 14-09-2016 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PANTHER PTHR23115 243 456 1.6E-212 T 14-09-2016 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 PANTHER PTHR23115 1 183 1.6E-212 T 14-09-2016 AMK01_RS01840 c884ae5c5d7869f1b0952173523bd393 527 Gene3D G3DSA:2.40.30.10 285 386 3.9E-22 T 14-09-2016 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 94 9.8E-21 T 14-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 SMART SM00836 454 584 5.6E-52 T 14-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 PANTHER PTHR11956:SF6 321 584 1.8E-180 T 14-09-2016 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 Gene3D G3DSA:1.10.730.10 460 584 5.4E-34 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 PANTHER PTHR11956 1 305 1.8E-180 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 PANTHER PTHR11956 321 584 1.8E-180 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 Pfam PF05746 DALR anticodon binding domain 454 584 9.3E-32 T 14-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 SUPERFAMILY SSF55190 28 107 1.23E-20 T 14-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 SMART SM01016 5 94 7.4E-32 T 14-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 SUPERFAMILY SSF52374 118 465 1.47E-84 T 14-09-2016 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 323 344 4.5E-24 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 4.5E-24 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 4.5E-24 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 4.5E-24 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 Gene3D G3DSA:3.30.1360.70 1 110 3.3E-27 T 14-09-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 16 584 6.4E-109 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 PANTHER PTHR11956:SF6 1 305 1.8E-180 T 14-09-2016 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 Gene3D G3DSA:3.40.50.620 117 459 1.9E-96 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 584 24.038 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 SUPERFAMILY SSF47323 448 584 9.16E-33 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 Pfam PF00750 tRNA synthetases class I (R) 313 424 1.2E-6 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS09175 e6b6f3dfd1ca56fec37df4be84b71f46 585 Pfam PF00750 tRNA synthetases class I (R) 116 180 1.1E-11 T 14-09-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK01_RS05820 e8b8c975dd7d942b05e5051df2a2e650 148 Gene3D G3DSA:1.10.10.10 1 138 1.2E-34 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05820 e8b8c975dd7d942b05e5051df2a2e650 148 PANTHER PTHR33221 1 133 3.5E-45 T 14-09-2016 AMK01_RS05820 e8b8c975dd7d942b05e5051df2a2e650 148 SUPERFAMILY SSF46785 1 137 4.65E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05820 e8b8c975dd7d942b05e5051df2a2e650 148 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 134 3.0E-34 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS05820 e8b8c975dd7d942b05e5051df2a2e650 148 Pfam PF02082 Transcriptional regulator 1 82 4.1E-26 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS05820 e8b8c975dd7d942b05e5051df2a2e650 148 PANTHER PTHR33221:SF1 1 133 3.5E-45 T 14-09-2016 AMK01_RS05820 e8b8c975dd7d942b05e5051df2a2e650 148 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-09-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 SUPERFAMILY SSF56059 738 1024 1.45E-89 T 14-09-2016 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 774 788 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 SUPERFAMILY SSF52440 1 127 2.88E-49 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 SMART SM01096 480 602 2.6E-70 T 14-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Gene3D G3DSA:3.30.470.20 256 452 4.1E-77 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Gene3D G3DSA:3.30.470.20 836 1025 3.6E-68 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PANTHER PTHR11405 1 149 0.0 T 14-09-2016 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PANTHER PTHR11405 203 802 0.0 T 14-09-2016 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 924 931 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 SUPERFAMILY SSF52440 618 740 6.62E-45 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 197 1143 0.0 T 14-09-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Gene3D G3DSA:3.30.1490.20 751 835 2.8E-19 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 SUPERFAMILY SSF48108 449 604 4.71E-48 T 14-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 660 670 1.1E-28 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 869 886 1.1E-28 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 924 953 1.1E-28 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 778 790 1.1E-28 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 631 645 1.1E-28 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 835 854 1.1E-28 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 1003 1021 1.1E-28 T 14-09-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Gene3D G3DSA:3.40.50.20 592 727 1.7E-55 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Gene3D G3DSA:1.10.1030.10 453 591 8.5E-48 T 14-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 SMART SM00851 1046 1132 1.0E-32 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PANTHER PTHR11405 824 1162 0.0 T 14-09-2016 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1152 13.108 T 14-09-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PANTHER PTHR11405:SF5 203 802 0.0 T 14-09-2016 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PANTHER PTHR11405:SF5 824 1162 0.0 T 14-09-2016 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 PANTHER PTHR11405:SF5 1 149 0.0 T 14-09-2016 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Gene3D G3DSA:3.40.50.1380 1028 1161 4.5E-42 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 203 387 8.9E-64 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 738 961 9.5E-25 T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 SUPERFAMILY SSF56059 203 454 1.75E-100 T 14-09-2016 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 483 602 1.1E-40 T 14-09-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 SUPERFAMILY SSF52335 1026 1161 1.01E-40 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 350 357 - T 14-09-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Gene3D G3DSA:3.40.50.20 3 108 3.3E-44 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Gene3D G3DSA:3.30.1490.20 205 255 8.9E-16 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS15170 e24f06c094889a29aebe656edc4df2a7 1162 Pfam PF02142 MGS-like domain 1047 1132 7.9E-20 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS12720 a70d607c12e0bffeab0a0163c72c98c0 139 Pfam PF01890 Cobalamin synthesis G C-terminus 13 132 5.5E-26 T 14-09-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AMK01_RS12720 a70d607c12e0bffeab0a0163c72c98c0 139 Gene3D G3DSA:3.30.420.180 10 133 7.1E-31 T 14-09-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AMK01_RS12720 a70d607c12e0bffeab0a0163c72c98c0 139 SUPERFAMILY SSF159664 10 134 7.59E-34 T 14-09-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AMK01_RS12720 a70d607c12e0bffeab0a0163c72c98c0 139 PANTHER PTHR37477 13 133 1.4E-16 T 14-09-2016 AMK01_RS12720 a70d607c12e0bffeab0a0163c72c98c0 139 PANTHER PTHR37477:SF1 13 133 1.4E-16 T 14-09-2016 AMK01_RS18910 831e125da760c6d7c8e867f13cd11d3b 320 SUPERFAMILY SSF161098 35 313 2.34E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS18910 831e125da760c6d7c8e867f13cd11d3b 320 Gene3D G3DSA:1.10.3720.10 33 308 1.7E-43 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS18910 831e125da760c6d7c8e867f13cd11d3b 320 PANTHER PTHR30193:SF5 9 314 1.9E-84 T 14-09-2016 AMK01_RS18910 831e125da760c6d7c8e867f13cd11d3b 320 PANTHER PTHR30193 9 314 1.9E-84 T 14-09-2016 AMK01_RS18910 831e125da760c6d7c8e867f13cd11d3b 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 1.4E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PANTHER PTHR24322:SF25 154 186 1.7E-57 T 14-09-2016 AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PANTHER PTHR24322 154 186 1.7E-57 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 SUPERFAMILY SSF51735 1 259 3.36E-68 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.0E-29 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.0E-29 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.0E-29 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.0E-29 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.0E-29 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 7.0E-29 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PANTHER PTHR24322:SF25 12 138 1.7E-57 T 14-09-2016 AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 191 0.0012 T 14-09-2016 AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.5E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 7.5E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 7.5E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 Gene3D G3DSA:3.40.50.720 2 259 1.4E-70 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 PANTHER PTHR24322 12 138 1.7E-57 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 Pfam PF00106 short chain dehydrogenase 8 194 7.8E-45 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05370 89f3bbb93902c3af6701e6c7765e8d97 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS09450 7430a18725aa1f35c993ef087b96fbbc 308 Pfam PF09935 Protein of unknown function (DUF2167) 45 290 2.1E-87 T 14-09-2016 IPR018682 Protein of unknown function DUF2167, membrane AMK01_RS16155 1f1a06b6314b8d3415b9aa2f04142083 346 PANTHER PTHR30036 1 334 4.0E-82 T 14-09-2016 AMK01_RS16155 1f1a06b6314b8d3415b9aa2f04142083 346 PANTHER PTHR30036:SF1 1 334 4.0E-82 T 14-09-2016 AMK01_RS16155 1f1a06b6314b8d3415b9aa2f04142083 346 SUPERFAMILY SSF53822 25 319 1.62E-70 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS16155 1f1a06b6314b8d3415b9aa2f04142083 346 Gene3D G3DSA:3.40.50.2300 142 320 1.0E-42 T 14-09-2016 AMK01_RS16155 1f1a06b6314b8d3415b9aa2f04142083 346 Gene3D G3DSA:3.40.50.2300 25 141 1.1E-31 T 14-09-2016 AMK01_RS16155 1f1a06b6314b8d3415b9aa2f04142083 346 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 332 1.8E-133 T 14-09-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 AMK01_RS16155 1f1a06b6314b8d3415b9aa2f04142083 346 Pfam PF13407 Periplasmic binding protein domain 28 285 1.7E-63 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS01025 1d2cf3d16cc09763846dfd503a886e6c 357 Pfam PF03411 Penicillin-insensitive murein endopeptidase 59 307 7.5E-100 T 14-09-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AMK01_RS01025 1d2cf3d16cc09763846dfd503a886e6c 357 Gene3D G3DSA:3.30.1380.10 45 308 2.0E-99 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS01025 1d2cf3d16cc09763846dfd503a886e6c 357 PIRSF PIRSF018455 1 316 8.2E-126 T 14-09-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AMK01_RS01025 1d2cf3d16cc09763846dfd503a886e6c 357 SUPERFAMILY SSF55166 45 308 8.63E-93 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 PANTHER PTHR13847 6 373 2.0E-174 T 14-09-2016 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 Gene3D G3DSA:2.40.30.110 291 378 1.0E-25 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 372 1.3E-94 T 14-09-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 SUPERFAMILY SSF103025 7 266 2.51E-79 T 14-09-2016 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 SUPERFAMILY SSF101790 282 378 1.8E-25 T 14-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 PIRSF PIRSF006487 2 378 2.2E-75 T 14-09-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 PANTHER PTHR13847:SF209 6 373 2.0E-174 T 14-09-2016 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 Gene3D G3DSA:3.30.1360.120 151 238 1.5E-55 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 Gene3D G3DSA:3.30.1360.120 7 59 1.5E-55 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 Gene3D G3DSA:3.30.70.1400 60 145 3.3E-27 T 14-09-2016 AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 Pfam PF01571 Aminomethyltransferase folate-binding domain 12 261 6.4E-82 T 14-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMK01_RS11485 71dbad95759dc9d7efac52b8cd895686 378 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 274 368 2.7E-22 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS11735 ac00a9007958cee77502b7b67301975e 286 SUPERFAMILY SSF51735 110 280 4.65E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS11735 ac00a9007958cee77502b7b67301975e 286 PANTHER PTHR21089 1 286 4.3E-58 T 14-09-2016 AMK01_RS11735 ac00a9007958cee77502b7b67301975e 286 PANTHER PTHR21089:SF1 1 286 4.3E-58 T 14-09-2016 AMK01_RS11735 ac00a9007958cee77502b7b67301975e 286 Gene3D G3DSA:3.40.192.10 3 114 1.2E-33 T 14-09-2016 AMK01_RS11735 ac00a9007958cee77502b7b67301975e 286 SUPERFAMILY SSF53223 5 109 7.48E-26 T 14-09-2016 AMK01_RS11735 ac00a9007958cee77502b7b67301975e 286 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 97 1.5E-21 T 14-09-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS11735 ac00a9007958cee77502b7b67301975e 286 Gene3D G3DSA:3.40.50.720 115 281 3.6E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16835 93b85f6bf78c3dd86abc4e5b57780d02 439 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 374 427 1.6E-13 T 14-09-2016 IPR006260 TonB, C-terminal GO:0006810 AMK01_RS16835 93b85f6bf78c3dd86abc4e5b57780d02 439 Pfam PF13103 TonB C terminal 356 434 8.2E-10 T 14-09-2016 IPR006260 TonB, C-terminal GO:0006810 AMK01_RS16835 93b85f6bf78c3dd86abc4e5b57780d02 439 Gene3D G3DSA:3.30.1150.10 334 436 2.7E-21 T 14-09-2016 AMK01_RS16835 93b85f6bf78c3dd86abc4e5b57780d02 439 SUPERFAMILY SSF74653 291 302 3.66E-12 T 14-09-2016 AMK01_RS16835 93b85f6bf78c3dd86abc4e5b57780d02 439 SUPERFAMILY SSF74653 345 427 3.66E-12 T 14-09-2016 AMK01_RS21175 0f1f7187e2ca013a94e993abd74d7f96 205 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 5 196 22.846 T 14-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK01_RS21175 0f1f7187e2ca013a94e993abd74d7f96 205 PANTHER PTHR31760:SF0 1 179 8.0E-28 T 14-09-2016 AMK01_RS21175 0f1f7187e2ca013a94e993abd74d7f96 205 PANTHER PTHR31760 1 179 8.0E-28 T 14-09-2016 AMK01_RS21175 0f1f7187e2ca013a94e993abd74d7f96 205 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 17 194 5.3E-31 T 14-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK01_RS21175 0f1f7187e2ca013a94e993abd74d7f96 205 SUPERFAMILY SSF53335 4 180 1.37E-22 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS21175 0f1f7187e2ca013a94e993abd74d7f96 205 PIRSF PIRSF003078 1 199 2.8E-39 T 14-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK01_RS21175 0f1f7187e2ca013a94e993abd74d7f96 205 Pfam PF02527 rRNA small subunit methyltransferase G 13 190 2.9E-33 T 14-09-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK01_RS21175 0f1f7187e2ca013a94e993abd74d7f96 205 Gene3D G3DSA:3.40.50.150 5 194 3.8E-42 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS01405 5c7bc6dc6dc5a874eb0f87fe1b19cff4 99 Gene3D G3DSA:2.30.30.110 2 99 8.5E-25 T 14-09-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AMK01_RS01405 5c7bc6dc6dc5a874eb0f87fe1b19cff4 99 Pfam PF01845 CcdB protein 3 98 3.4E-23 T 14-09-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AMK01_RS01405 5c7bc6dc6dc5a874eb0f87fe1b19cff4 99 SUPERFAMILY SSF50118 2 99 5.17E-20 T 14-09-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AMK01_RS01405 5c7bc6dc6dc5a874eb0f87fe1b19cff4 99 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 15 98 2.0E-7 T 14-09-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 SMART SM01008 31 139 6.0E-50 T 14-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK01_RS15900 5b435f8a053f2053622669775b261909 779 SUPERFAMILY SSF54665 18 139 6.93E-41 T 14-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Gene3D G3DSA:3.90.1170.50 20 139 6.7E-41 T 14-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Gene3D G3DSA:3.30.365.10 188 281 7.9E-34 T 14-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Gene3D G3DSA:3.30.365.10 455 610 1.1E-52 T 14-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 31 139 2.2E-30 T 14-09-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK01_RS15900 5b435f8a053f2053622669775b261909 779 PANTHER PTHR11908:SF66 20 778 0.0 T 14-09-2016 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 18 777 0.0 T 14-09-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 705 9.2E-196 T 14-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Gene3D G3DSA:3.30.365.10 143 187 2.9E-20 T 14-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Gene3D G3DSA:3.30.365.10 284 359 2.9E-20 T 14-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 SUPERFAMILY SSF56003 139 775 1.1E-205 T 14-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Gene3D G3DSA:3.30.365.10 620 775 8.6E-83 T 14-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 Gene3D G3DSA:3.30.365.10 360 454 8.6E-83 T 14-09-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK01_RS15900 5b435f8a053f2053622669775b261909 779 PANTHER PTHR11908 20 778 0.0 T 14-09-2016 AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 Pfam PF01926 50S ribosome-binding GTPase 24 138 1.5E-23 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 SUPERFAMILY SSF52540 24 217 7.81E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 PANTHER PTHR11649:SF3 21 308 4.7E-116 T 14-09-2016 AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 Gene3D G3DSA:3.30.300.20 201 305 1.9E-38 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 23 181 5.7E-26 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 SUPERFAMILY SSF54814 194 310 9.81E-41 T 14-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 PANTHER PTHR11649 21 308 4.7E-116 T 14-09-2016 AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 Pfam PF07650 KH domain 221 297 2.9E-19 T 14-09-2016 IPR004044 K Homology domain, type 2 GO:0003723 AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 TIGRFAM TIGR00436 era: GTP-binding protein Era 22 292 6.9E-76 T 14-09-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 Gene3D G3DSA:3.40.50.300 13 187 8.3E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07100 23c1491b4616b15c0af19f01ea4e427d 313 Hamap MF_00367 GTPase Era [era]. 19 309 34.118 T 14-09-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AMK01_RS16555 20cd77bae7e32c78201ab0b9a7aa55b8 141 SUPERFAMILY SSF47413 3 79 4.61E-27 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS16555 20cd77bae7e32c78201ab0b9a7aa55b8 141 Pfam PF01381 Helix-turn-helix 20 70 3.5E-12 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS16555 20cd77bae7e32c78201ab0b9a7aa55b8 141 PANTHER PTHR10245 5 75 4.2E-32 T 14-09-2016 AMK01_RS16555 20cd77bae7e32c78201ab0b9a7aa55b8 141 SMART SM00530 16 71 3.8E-13 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS16555 20cd77bae7e32c78201ab0b9a7aa55b8 141 Gene3D G3DSA:1.10.260.40 13 74 5.2E-17 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS16555 20cd77bae7e32c78201ab0b9a7aa55b8 141 PANTHER PTHR10245:SF38 5 75 4.2E-32 T 14-09-2016 AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 Gene3D G3DSA:3.40.50.720 4 255 1.3E-70 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 3.6E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.6E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.6E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PANTHER PTHR24322 161 192 5.2E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PANTHER PTHR24322 14 144 5.2E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 8.4E-50 T 14-09-2016 AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 192 2.1E-5 T 14-09-2016 AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.9E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.9E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 7.9E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 7.9E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 7.9E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 7.9E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 SUPERFAMILY SSF51735 8 255 6.18E-66 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19855 dc2346b3859d3ba0ec040140b2b0f9c2 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS15580 fc8107a82a9fd1d1dcb3d75e3d4d2cad 138 Gene3D G3DSA:3.40.630.30 37 138 6.5E-24 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS15580 fc8107a82a9fd1d1dcb3d75e3d4d2cad 138 Pfam PF00583 Acetyltransferase (GNAT) family 66 117 6.6E-5 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS15580 fc8107a82a9fd1d1dcb3d75e3d4d2cad 138 SUPERFAMILY SSF55729 14 138 1.05E-21 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11555 7207257d9ca07ce1e04134c3cb51f47d 178 Pfam PF13302 Acetyltransferase (GNAT) domain 12 149 7.8E-27 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS11555 7207257d9ca07ce1e04134c3cb51f47d 178 SUPERFAMILY SSF55729 6 150 2.01E-31 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11555 7207257d9ca07ce1e04134c3cb51f47d 178 PANTHER PTHR13256 1 150 3.8E-29 T 14-09-2016 AMK01_RS11555 7207257d9ca07ce1e04134c3cb51f47d 178 PANTHER PTHR13256:SF10 1 150 3.8E-29 T 14-09-2016 AMK01_RS11555 7207257d9ca07ce1e04134c3cb51f47d 178 Gene3D G3DSA:3.40.630.30 2 151 5.0E-36 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 PANTHER PTHR20854 2 269 7.6E-64 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 SUPERFAMILY SSF56655 7 262 1.96E-67 T 14-09-2016 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 68 84 6.4E-32 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 46 66 6.4E-32 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 137 160 6.4E-32 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 6.4E-32 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 6.4E-32 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 6.4E-32 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 Gene3D G3DSA:3.30.540.10 7 158 5.8E-45 T 14-09-2016 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 PANTHER PTHR20854:SF4 2 269 7.6E-64 T 14-09-2016 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 Pfam PF00459 Inositol monophosphatase family 8 261 1.2E-53 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 Gene3D G3DSA:3.40.190.80 159 264 2.1E-23 T 14-09-2016 AMK01_RS10890 0911488d1e34b7120c729e6182b49bbd 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 14-09-2016 IPR020583 Inositol monophosphatase, metal-binding site AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 SUPERFAMILY SSF50685 9 367 1.19E-119 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 Gene3D G3DSA:2.40.40.10 175 369 2.9E-47 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 Gene3D G3DSA:2.40.40.10 11 170 2.1E-26 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 Pfam PF06725 3D domain 287 363 1.5E-21 T 14-09-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 SMART SM00925 106 264 1.3E-78 T 14-09-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 PANTHER PTHR30124:SF0 71 366 6.4E-86 T 14-09-2016 AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 PANTHER PTHR30124 71 366 6.4E-86 T 14-09-2016 AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 PIRSF PIRSF019422 1 373 2.5E-111 T 14-09-2016 IPR026044 Membrane-bound lytic murein transglycosylase A AMK01_RS00050 99c2910f3ee7e75931753e98c71aa8d3 373 Pfam PF03562 MltA specific insert domain 21 264 1.9E-65 T 14-09-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 Gene3D G3DSA:3.30.70.240 401 479 2.3E-30 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 PANTHER PTHR23115:SF14 3 592 5.1E-267 T 14-09-2016 IPR006298 GTP-binding protein TypA GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 598 4.5E-278 T 14-09-2016 IPR006298 GTP-binding protein TypA GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 1.6E-58 T 14-09-2016 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 SUPERFAMILY SSF54980 398 511 2.35E-26 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 PANTHER PTHR23115 3 592 5.1E-267 T 14-09-2016 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 SUPERFAMILY SSF50447 149 297 5.41E-28 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 Pfam PF03144 Elongation factor Tu domain 2 217 288 3.7E-14 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 SMART SM00838 395 483 0.0056 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 SUPERFAMILY SSF52540 3 199 1.45E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 Pfam PF00679 Elongation factor G C-terminus 395 479 9.2E-21 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 Gene3D G3DSA:3.30.70.870 302 400 1.0E-33 T 14-09-2016 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 Gene3D G3DSA:3.40.50.300 3 202 2.6E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 Gene3D G3DSA:2.40.50.250 482 576 1.2E-39 T 14-09-2016 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 Gene3D G3DSA:2.40.30.10 203 301 2.7E-23 T 14-09-2016 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 147 1.3E-24 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 PRINTS PR00315 GTP-binding elongation factor signature 49 57 9.8E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 PRINTS PR00315 GTP-binding elongation factor signature 121 130 9.8E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 PRINTS PR00315 GTP-binding elongation factor signature 85 96 9.8E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 PRINTS PR00315 GTP-binding elongation factor signature 69 79 9.8E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 PRINTS PR00315 GTP-binding elongation factor signature 5 18 9.8E-16 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS20135 14fc0fc81bae1df2448e901d2fe27ad2 606 SUPERFAMILY SSF54980 301 386 1.62E-13 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS02165 875b21ea573bd94be2142b28e08cd127 286 Gene3D G3DSA:3.40.1280.10 129 279 1.1E-49 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK01_RS02165 875b21ea573bd94be2142b28e08cd127 286 SUPERFAMILY SSF75217 121 280 4.25E-43 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AMK01_RS02165 875b21ea573bd94be2142b28e08cd127 286 Pfam PF00588 SpoU rRNA Methylase family 135 273 8.0E-36 T 14-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK01_RS02165 875b21ea573bd94be2142b28e08cd127 286 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 46 117 8.2E-7 T 14-09-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK01_RS02165 875b21ea573bd94be2142b28e08cd127 286 SUPERFAMILY SSF55315 18 119 1.86E-23 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AMK01_RS02165 875b21ea573bd94be2142b28e08cd127 286 SMART SM00967 46 122 6.0E-11 T 14-09-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK01_RS02165 875b21ea573bd94be2142b28e08cd127 286 Gene3D G3DSA:3.30.1330.30 23 121 4.8E-32 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AMK01_RS02165 875b21ea573bd94be2142b28e08cd127 286 PANTHER PTHR12029 24 277 5.5E-63 T 14-09-2016 AMK01_RS12885 ff4d717d8d2f7f6f314bb5652d8673ce 276 Gene3D G3DSA:3.40.50.2300 18 140 3.9E-10 T 14-09-2016 AMK01_RS12885 ff4d717d8d2f7f6f314bb5652d8673ce 276 PANTHER PTHR26402 142 252 2.2E-32 T 14-09-2016 AMK01_RS12885 ff4d717d8d2f7f6f314bb5652d8673ce 276 Pfam PF00072 Response regulator receiver domain 144 252 4.7E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12885 ff4d717d8d2f7f6f314bb5652d8673ce 276 SMART SM00448 19 133 0.056 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12885 ff4d717d8d2f7f6f314bb5652d8673ce 276 SMART SM00448 142 256 6.4E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12885 ff4d717d8d2f7f6f314bb5652d8673ce 276 Gene3D G3DSA:3.40.50.2300 141 262 4.7E-30 T 14-09-2016 AMK01_RS12885 ff4d717d8d2f7f6f314bb5652d8673ce 276 SUPERFAMILY SSF52172 18 141 1.57E-11 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS12885 ff4d717d8d2f7f6f314bb5652d8673ce 276 SUPERFAMILY SSF52172 141 270 1.35E-30 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 641 2.0E-230 T 14-09-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Gene3D G3DSA:3.40.50.140 1 135 8.7E-41 T 14-09-2016 IPR006171 Toprim domain AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 PANTHER PTHR11390 1 682 0.0 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Pfam PF13368 Topoisomerase C-terminal repeat 721 773 9.5E-17 T 14-09-2016 IPR025589 Topoisomerase C-terminal repeat AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Pfam PF13368 Topoisomerase C-terminal repeat 791 840 1.2E-18 T 14-09-2016 IPR025589 Topoisomerase C-terminal repeat AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Pfam PF13368 Topoisomerase C-terminal repeat 663 718 1.2E-15 T 14-09-2016 IPR025589 Topoisomerase C-terminal repeat AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 733 51.738 T 14-09-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 SUPERFAMILY SSF56712 1 575 8.11E-181 T 14-09-2016 IPR023405 DNA topoisomerase, type IA, core domain AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 SUPERFAMILY SSF56712 606 614 8.11E-181 T 14-09-2016 IPR023405 DNA topoisomerase, type IA, core domain AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 PANTHER PTHR11390:SF27 1 682 0.0 T 14-09-2016 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Gene3D G3DSA:1.10.460.10 136 187 2.1E-57 T 14-09-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Gene3D G3DSA:1.10.460.10 464 576 2.1E-57 T 14-09-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 285 307 - T 14-09-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Pfam PF01751 Toprim domain 3 115 6.8E-23 T 14-09-2016 IPR006171 Toprim domain AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 487 501 8.4E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 8.4E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 8.4E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 298 307 8.4E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 376 392 8.4E-34 T 14-09-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 SMART SM00436 106 194 1.0E-43 T 14-09-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Gene3D G3DSA:3.30.65.10 608 645 5.8E-10 T 14-09-2016 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 607 642 2.5E-13 T 14-09-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 SUPERFAMILY SSF57783 606 644 1.41E-8 T 14-09-2016 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Gene3D G3DSA:2.70.20.10 188 320 1.6E-31 T 14-09-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Gene3D G3DSA:2.70.20.10 325 463 5.2E-35 T 14-09-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 SMART SM00437 248 524 2.2E-100 T 14-09-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 Pfam PF01131 DNA topoisomerase 130 561 9.8E-119 T 14-09-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMK01_RS08270 f76271aecfad87bb96d83c22c1f26dd3 884 SMART SM00493 1 101 4.4E-25 T 14-09-2016 IPR006171 Toprim domain AMK01_RS06010 a2d42ca9dcfb92530567873c57cb9023 268 Gene3D G3DSA:2.40.440.10 124 267 4.2E-31 T 14-09-2016 AMK01_RS06010 a2d42ca9dcfb92530567873c57cb9023 268 Pfam PF03734 L,D-transpeptidase catalytic domain 130 267 6.7E-16 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS06010 a2d42ca9dcfb92530567873c57cb9023 268 PANTHER PTHR30582:SF1 113 268 2.4E-44 T 14-09-2016 AMK01_RS06010 a2d42ca9dcfb92530567873c57cb9023 268 PANTHER PTHR30582 113 268 2.4E-44 T 14-09-2016 AMK01_RS06010 a2d42ca9dcfb92530567873c57cb9023 268 SUPERFAMILY SSF141523 206 267 1.31E-29 T 14-09-2016 AMK01_RS06010 a2d42ca9dcfb92530567873c57cb9023 268 SUPERFAMILY SSF141523 123 176 1.31E-29 T 14-09-2016 AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 173 256 6.0E-27 T 14-09-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 4 256 40.916 T 14-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 PANTHER PTHR11935 4 256 1.1E-89 T 14-09-2016 AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 PANTHER PTHR11935:SF7 4 256 1.1E-89 T 14-09-2016 AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 SMART SM00849 14 172 3.6E-32 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 Pfam PF00753 Metallo-beta-lactamase superfamily 32 172 4.9E-19 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 PIRSF PIRSF005457 1 256 9.1E-101 T 14-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 Gene3D G3DSA:3.60.15.10 8 256 7.2E-83 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 SUPERFAMILY SSF56281 8 256 3.92E-69 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS19600 9cea9fa321c891e433d966761133b00c 256 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 10 256 1.3E-93 T 14-09-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK01_RS11730 42e27a69aa2c908b6676ea25caf13a45 122 SUPERFAMILY SSF55331 2 118 1.14E-27 T 14-09-2016 IPR014347 Tautomerase/MIF superfamily AMK01_RS11730 42e27a69aa2c908b6676ea25caf13a45 122 PANTHER PTHR37950 2 119 3.3E-14 T 14-09-2016 AMK01_RS11730 42e27a69aa2c908b6676ea25caf13a45 122 PANTHER PTHR37950:SF1 2 119 3.3E-14 T 14-09-2016 AMK01_RS11730 42e27a69aa2c908b6676ea25caf13a45 122 Gene3D G3DSA:3.30.429.10 2 118 2.0E-22 T 14-09-2016 AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 Pfam PF00925 GTP cyclohydrolase II 213 363 6.4E-29 T 14-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 201 8.3E-74 T 14-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 200 1.6E-84 T 14-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 3 205 37.866 T 14-09-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 PIRSF PIRSF001259 3 367 4.3E-136 T 14-09-2016 AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 PANTHER PTHR21327 8 361 2.0E-157 T 14-09-2016 AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 SUPERFAMILY SSF142695 207 364 1.83E-41 T 14-09-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 SUPERFAMILY SSF55821 5 204 7.55E-81 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 Gene3D G3DSA:3.90.870.10 4 210 1.6E-94 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK01_RS04745 fb438d43844a343cbc60c86d7616d84b 367 PANTHER PTHR21327:SF10 8 361 2.0E-157 T 14-09-2016 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 SUPERFAMILY SSF103473 19 406 8.24E-66 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 PRINTS PR01035 Tetracycline resistance protein signature 353 376 6.2E-11 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 PRINTS PR01035 Tetracycline resistance protein signature 31 47 6.2E-11 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 PRINTS PR01035 Tetracycline resistance protein signature 93 117 6.2E-11 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 PRINTS PR01035 Tetracycline resistance protein signature 120 141 6.2E-11 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 PRINTS PR01035 Tetracycline resistance protein signature 150 172 6.2E-11 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 PANTHER PTHR23504 6 403 3.7E-77 T 14-09-2016 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 Gene3D G3DSA:1.20.1250.20 226 407 7.8E-28 T 14-09-2016 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 Gene3D G3DSA:1.20.1250.20 19 209 3.5E-33 T 14-09-2016 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 Pfam PF07690 Major Facilitator Superfamily 26 250 1.6E-29 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS06175 36cf34484cef96dc789c0f81676be2dd 424 PANTHER PTHR23504:SF11 6 403 3.7E-77 T 14-09-2016 AMK01_RS13105 2f996a22ab259080d0e102ffc5d31f59 293 Pfam PF05368 NmrA-like family 7 231 1.8E-58 T 14-09-2016 IPR008030 NmrA-like domain AMK01_RS13105 2f996a22ab259080d0e102ffc5d31f59 293 PANTHER PTHR14194 1 280 4.4E-59 T 14-09-2016 AMK01_RS13105 2f996a22ab259080d0e102ffc5d31f59 293 SUPERFAMILY SSF51735 4 257 2.59E-64 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13105 2f996a22ab259080d0e102ffc5d31f59 293 PANTHER PTHR14194:SF46 1 280 4.4E-59 T 14-09-2016 AMK01_RS13105 2f996a22ab259080d0e102ffc5d31f59 293 Gene3D G3DSA:3.40.50.720 1 226 3.9E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04580 8bc622ef730f31c41fe848654a75ddd3 326 PANTHER PTHR17490 1 325 1.6E-86 T 14-09-2016 AMK01_RS04580 8bc622ef730f31c41fe848654a75ddd3 326 Gene3D G3DSA:3.90.870.10 7 204 1.1E-66 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK01_RS04580 8bc622ef730f31c41fe848654a75ddd3 326 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 206 1.7E-45 T 14-09-2016 IPR006070 YrdC-like domain GO:0003725 AMK01_RS04580 8bc622ef730f31c41fe848654a75ddd3 326 Pfam PF01300 Telomere recombination 21 196 5.3E-49 T 14-09-2016 IPR006070 YrdC-like domain GO:0003725 AMK01_RS04580 8bc622ef730f31c41fe848654a75ddd3 326 SUPERFAMILY SSF55821 11 207 4.27E-56 T 14-09-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK01_RS04580 8bc622ef730f31c41fe848654a75ddd3 326 PANTHER PTHR17490:SF3 1 325 1.6E-86 T 14-09-2016 AMK01_RS04580 8bc622ef730f31c41fe848654a75ddd3 326 PIRSF PIRSF004930 1 326 1.3E-97 T 14-09-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AMK01_RS04580 8bc622ef730f31c41fe848654a75ddd3 326 Pfam PF03481 Putative GTP-binding controlling metal-binding 201 321 1.2E-19 T 14-09-2016 IPR005145 Putative GTP-binding controlling metal-binding domain AMK01_RS00755 13027d742c839288b1c12f4f1ca75faf 151 Gene3D G3DSA:3.40.630.30 4 149 3.5E-36 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS00755 13027d742c839288b1c12f4f1ca75faf 151 Pfam PF00583 Acetyltransferase (GNAT) family 61 140 1.8E-11 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS00755 13027d742c839288b1c12f4f1ca75faf 151 SUPERFAMILY SSF55729 3 145 3.14E-23 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS00755 13027d742c839288b1c12f4f1ca75faf 151 PANTHER PTHR23091 3 142 3.0E-17 T 14-09-2016 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 Gene3D G3DSA:1.20.5.220 129 140 2.2E-4 T 14-09-2016 IPR029027 Single alpha-helix domain AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 14-09-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 SUPERFAMILY SSF81330 11 136 2.88E-35 T 14-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 PANTHER PTHR30266 1 143 4.5E-47 T 14-09-2016 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 139 4.3E-44 T 14-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 PANTHER PTHR30266:SF2 1 143 4.5E-47 T 14-09-2016 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 141 8.0E-38 T 14-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 1.3E-9 T 14-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 1.3E-9 T 14-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.3E-9 T 14-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK01_RS03005 720b0c6e6a62dc78a7a0fd0b34cd6a3e 145 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 143 25.659 T 14-09-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK01_RS14775 877b50b64d538396f626da07097b7081 552 Gene3D G3DSA:3.40.50.970 1 173 2.1E-59 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS14775 877b50b64d538396f626da07097b7081 552 PANTHER PTHR18968:SF120 3 546 3.3E-251 T 14-09-2016 AMK01_RS14775 877b50b64d538396f626da07097b7081 552 SUPERFAMILY SSF52467 154 352 4.21E-37 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS14775 877b50b64d538396f626da07097b7081 552 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 14-09-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMK01_RS14775 877b50b64d538396f626da07097b7081 552 SUPERFAMILY SSF52518 1 173 2.27E-49 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS14775 877b50b64d538396f626da07097b7081 552 Gene3D G3DSA:3.40.50.970 359 539 6.2E-62 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS14775 877b50b64d538396f626da07097b7081 552 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 4.0E-51 T 14-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK01_RS14775 877b50b64d538396f626da07097b7081 552 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 530 8.3E-46 T 14-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK01_RS14775 877b50b64d538396f626da07097b7081 552 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 326 1.1E-25 T 14-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK01_RS14775 877b50b64d538396f626da07097b7081 552 SUPERFAMILY SSF52518 362 540 3.93E-60 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS14775 877b50b64d538396f626da07097b7081 552 Gene3D G3DSA:3.40.50.1220 182 333 2.1E-34 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS14775 877b50b64d538396f626da07097b7081 552 PANTHER PTHR18968 3 546 3.3E-251 T 14-09-2016 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 PANTHER PTHR30177 117 336 7.1E-56 T 14-09-2016 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 PANTHER PTHR30177:SF2 117 336 7.1E-56 T 14-09-2016 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 PANTHER PTHR30177:SF2 605 621 7.1E-56 T 14-09-2016 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 SUPERFAMILY SSF161098 460 644 5.1E-34 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 Gene3D G3DSA:1.10.3720.10 148 333 1.0E-29 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 SUPERFAMILY SSF161098 147 332 3.79E-34 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 PANTHER PTHR30177 605 621 7.1E-56 T 14-09-2016 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 167 327 4.9E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 483 645 1.4E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10540 4d4e92c30800bd92e6f3c478b04e5e27 660 Gene3D G3DSA:1.10.3720.10 460 645 6.3E-31 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09195 2f87d5000bca4552a6e391925c2f3898 234 SUPERFAMILY SSF46785 21 92 1.22E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09195 2f87d5000bca4552a6e391925c2f3898 234 PANTHER PTHR34298:SF2 13 233 2.1E-51 T 14-09-2016 AMK01_RS09195 2f87d5000bca4552a6e391925c2f3898 234 Gene3D G3DSA:1.10.10.10 22 92 7.3E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09195 2f87d5000bca4552a6e391925c2f3898 234 SUPERFAMILY SSF46785 98 171 1.36E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09195 2f87d5000bca4552a6e391925c2f3898 234 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 25 184 1.0E-29 T 14-09-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMK01_RS09195 2f87d5000bca4552a6e391925c2f3898 234 PANTHER PTHR34298 13 233 2.1E-51 T 14-09-2016 AMK01_RS09195 2f87d5000bca4552a6e391925c2f3898 234 Gene3D G3DSA:1.10.10.10 97 171 1.3E-33 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09195 2f87d5000bca4552a6e391925c2f3898 234 Pfam PF04079 Segregation and condensation complex subunit ScpB 26 179 1.0E-46 T 14-09-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMK01_RS12920 a1bb9cae399f27d6426b4f480ed487dd 241 Gene3D G3DSA:3.40.50.360 7 231 4.9E-103 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS12920 a1bb9cae399f27d6426b4f480ed487dd 241 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 10 227 4.2E-123 T 14-09-2016 IPR014063 Arsenate resistance ArsH AMK01_RS12920 a1bb9cae399f27d6426b4f480ed487dd 241 PANTHER PTHR30041:SF1 20 236 4.5E-127 T 14-09-2016 AMK01_RS12920 a1bb9cae399f27d6426b4f480ed487dd 241 SUPERFAMILY SSF52218 7 227 7.68E-64 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS12920 a1bb9cae399f27d6426b4f480ed487dd 241 PANTHER PTHR30041 20 236 4.5E-127 T 14-09-2016 AMK01_RS12920 a1bb9cae399f27d6426b4f480ed487dd 241 Pfam PF03358 NADPH-dependent FMN reductase 35 178 1.4E-26 T 14-09-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMK01_RS13245 15006b7171b0506a327b4be00a5676aa 173 SUPERFAMILY SSF46785 7 114 1.12E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13245 15006b7171b0506a327b4be00a5676aa 173 PANTHER PTHR33204:SF10 9 110 2.8E-24 T 14-09-2016 AMK01_RS13245 15006b7171b0506a327b4be00a5676aa 173 PANTHER PTHR33204 9 110 2.8E-24 T 14-09-2016 AMK01_RS13245 15006b7171b0506a327b4be00a5676aa 173 Pfam PF01638 HxlR-like helix-turn-helix 17 106 1.1E-13 T 14-09-2016 IPR002577 Helix-turn-helix, HxlR type AMK01_RS13245 15006b7171b0506a327b4be00a5676aa 173 Gene3D G3DSA:1.10.10.10 6 105 7.1E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 Pfam PF00501 AMP-binding enzyme 102 524 9.0E-47 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 Gene3D G3DSA:3.40.50.980 98 274 4.3E-25 T 14-09-2016 AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 PANTHER PTHR24095 1 647 2.0E-288 T 14-09-2016 AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 Gene3D G3DSA:2.30.38.10 446 520 1.0E-4 T 14-09-2016 AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 Gene3D G3DSA:3.40.50.980 275 427 1.1E-13 T 14-09-2016 AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 538 612 5.5E-6 T 14-09-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 268 279 - T 14-09-2016 IPR020845 AMP-binding, conserved site AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 PANTHER PTHR24095:SF46 1 647 2.0E-288 T 14-09-2016 AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 SUPERFAMILY SSF56801 39 625 1.07E-123 T 14-09-2016 AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 Gene3D G3DSA:3.30.300.30 525 630 1.2E-15 T 14-09-2016 AMK01_RS03805 fb851a7254af7b18b14296ba34ecfa1e 650 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 4 650 0.0 T 14-09-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 AMK01_RS01115 273caf9fa784be8b7957662c83302c13 268 PIRSF PIRSF000477 1 263 1.7E-87 T 14-09-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 AMK01_RS01115 273caf9fa784be8b7957662c83302c13 268 Pfam PF01048 Phosphorylase superfamily 18 262 4.8E-50 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS01115 273caf9fa784be8b7957662c83302c13 268 SUPERFAMILY SSF53167 3 261 3.01E-84 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS01115 273caf9fa784be8b7957662c83302c13 268 TIGRFAM TIGR01698 PUNP: purine nucleotide phosphorylase 19 262 3.9E-111 T 14-09-2016 IPR011269 Putative purine nucleotide phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 AMK01_RS01115 273caf9fa784be8b7957662c83302c13 268 PANTHER PTHR11904 1 262 1.8E-98 T 14-09-2016 IPR001369 PNP/MTAP phosphorylase AMK01_RS01115 273caf9fa784be8b7957662c83302c13 268 PANTHER PTHR11904:SF9 1 262 1.8E-98 T 14-09-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 AMK01_RS01115 273caf9fa784be8b7957662c83302c13 268 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 20 262 4.6E-100 T 14-09-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 AMK01_RS01115 273caf9fa784be8b7957662c83302c13 268 Gene3D G3DSA:3.40.50.1580 2 262 1.8E-89 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 145 159 - T 14-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 SMART SM00363 23 89 8.5E-5 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 SUPERFAMILY SSF55120 86 340 1.97E-75 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 PANTHER PTHR11079 18 341 3.0E-120 T 14-09-2016 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 Gene3D G3DSA:3.10.290.10 24 73 9.1E-10 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 Pfam PF00849 RNA pseudouridylate synthase 98 268 1.2E-30 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 SUPERFAMILY SSF55174 21 111 6.9E-10 T 14-09-2016 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 340 4.4E-91 T 14-09-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 Pfam PF01479 S4 domain 24 69 2.6E-7 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS17180 07690e14577120dfb80c2d1cff6e47de 341 PANTHER PTHR11079:SF73 18 341 3.0E-120 T 14-09-2016 AMK01_RS25285 8836aaec41d829e355b44b04c0b0a0dd 66 Pfam PF01475 Ferric uptake regulator family 1 65 7.2E-14 T 14-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK01_RS25285 8836aaec41d829e355b44b04c0b0a0dd 66 PANTHER PTHR33202:SF3 2 66 1.4E-24 T 14-09-2016 AMK01_RS25285 8836aaec41d829e355b44b04c0b0a0dd 66 PANTHER PTHR33202 2 66 1.4E-24 T 14-09-2016 AMK01_RS25285 8836aaec41d829e355b44b04c0b0a0dd 66 Gene3D G3DSA:1.10.10.10 1 48 1.3E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS25285 8836aaec41d829e355b44b04c0b0a0dd 66 SUPERFAMILY SSF46785 2 66 1.51E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 365 55.333 T 14-09-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 PANTHER PTHR11751:SF347 8 368 1.2E-89 T 14-09-2016 AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 Gene3D G3DSA:3.90.1150.10 265 365 1.4E-17 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 Pfam PF00155 Aminotransferase class I and II 33 354 1.4E-51 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 Gene3D G3DSA:3.40.640.10 46 264 1.5E-61 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 PANTHER PTHR11751 8 368 1.2E-89 T 14-09-2016 AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 363 2.6E-87 T 14-09-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 221 230 - T 14-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AMK01_RS19590 7f7f4b45100ddf7ddd24b0976a068ab0 369 SUPERFAMILY SSF53383 9 364 8.43E-78 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 Gene3D G3DSA:3.40.50.2300 140 254 6.7E-23 T 14-09-2016 AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 SUPERFAMILY SSF88659 89 136 2.88E-5 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 PIRSF PIRSF036400 1 264 1.6E-147 T 14-09-2016 IPR014605 Signal transduction response regulator PhyR-like, alphaproteobacteria AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 PANTHER PTHR26402:SF413 140 254 1.9E-23 T 14-09-2016 AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 Gene3D G3DSA:1.10.10.10 89 137 7.8E-7 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 PANTHER PTHR26402 140 254 1.9E-23 T 14-09-2016 AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 SUPERFAMILY SSF52172 141 254 2.13E-22 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 Pfam PF00072 Response regulator receiver domain 142 246 1.9E-12 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS16865 2519f45c12d3ce09bf2d8e4330fac59e 264 SMART SM00448 140 250 3.0E-13 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 Gene3D G3DSA:3.40.50.970 193 586 1.2E-79 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 Gene3D G3DSA:3.40.50.970 641 836 6.3E-19 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 95 992 0.0 T 14-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 Pfam PF02779 Transketolase, pyrimidine binding domain 639 834 1.8E-66 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 PIRSF PIRSF000157 1 994 0.0 T 14-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 SUPERFAMILY SSF52518 623 839 6.31E-52 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 SMART SM00861 640 833 2.6E-62 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 13 52 8.2E-19 T 14-09-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 SUPERFAMILY SSF52518 153 583 6.96E-92 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 PANTHER PTHR23152 14 993 0.0 T 14-09-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 Pfam PF00676 Dehydrogenase E1 component 246 570 1.1E-59 T 14-09-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AMK01_RS19995 ead3ce19af23330773e6e07f2322ec59 994 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 838 992 7.5E-52 T 14-09-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 PANTHER PTHR11410:SF6 4 250 2.1E-105 T 14-09-2016 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 ProSitePatterns PS00449 ATP synthase a subunit signature. 171 180 - T 14-09-2016 IPR023011 ATPase, F0 complex, subunit A, active site AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 248 15.506 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 PANTHER PTHR11410 4 250 2.1E-105 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 PRINTS PR00123 ATP synthase A subunit signature 228 243 9.6E-31 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 PRINTS PR00123 ATP synthase A subunit signature 87 103 9.6E-31 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 PRINTS PR00123 ATP synthase A subunit signature 168 190 9.6E-31 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 PRINTS PR00123 ATP synthase A subunit signature 148 163 9.6E-31 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 6 245 3.9E-68 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 SUPERFAMILY SSF81336 79 242 4.45E-46 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 Gene3D G3DSA:1.20.120.220 79 246 2.2E-49 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS04405 e23c144b2ab557148fd1c5ea01544a03 250 Pfam PF00119 ATP synthase A chain 31 241 1.4E-51 T 14-09-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK01_RS12450 4f1e4daa86f59a7a494dbbda82888eb1 145 Pfam PF00571 CBS domain 4 53 3.7E-7 T 14-09-2016 IPR000644 CBS domain AMK01_RS12450 4f1e4daa86f59a7a494dbbda82888eb1 145 Pfam PF00571 CBS domain 67 118 1.9E-11 T 14-09-2016 IPR000644 CBS domain AMK01_RS12450 4f1e4daa86f59a7a494dbbda82888eb1 145 SMART SM00116 74 122 3.0E-5 T 14-09-2016 IPR000644 CBS domain AMK01_RS12450 4f1e4daa86f59a7a494dbbda82888eb1 145 SMART SM00116 10 57 0.022 T 14-09-2016 IPR000644 CBS domain AMK01_RS12450 4f1e4daa86f59a7a494dbbda82888eb1 145 PANTHER PTHR11911 1 119 5.1E-26 T 14-09-2016 AMK01_RS12450 4f1e4daa86f59a7a494dbbda82888eb1 145 SUPERFAMILY SSF54631 1 117 8.46E-30 T 14-09-2016 AMK01_RS12450 4f1e4daa86f59a7a494dbbda82888eb1 145 Gene3D G3DSA:3.10.580.10 1 117 9.8E-29 T 14-09-2016 AMK01_RS07865 c6455a47cef344bb6a563d2f3249e5db 445 Gene3D G3DSA:3.40.190.10 164 370 3.1E-33 T 14-09-2016 AMK01_RS07865 c6455a47cef344bb6a563d2f3249e5db 445 SUPERFAMILY SSF53850 42 442 2.82E-61 T 14-09-2016 AMK01_RS07865 c6455a47cef344bb6a563d2f3249e5db 445 PANTHER PTHR30061 1 442 2.1E-49 T 14-09-2016 AMK01_RS07865 c6455a47cef344bb6a563d2f3249e5db 445 Pfam PF13416 Bacterial extracellular solute-binding protein 61 373 1.9E-33 T 14-09-2016 AMK01_RS02375 17e1e1cba6d59faf0cd20c2eb7fef544 44 PANTHER PTHR14503 1 44 3.3E-22 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS02375 17e1e1cba6d59faf0cd20c2eb7fef544 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-09-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS02375 17e1e1cba6d59faf0cd20c2eb7fef544 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-14 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS02375 17e1e1cba6d59faf0cd20c2eb7fef544 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.5E-24 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS02375 17e1e1cba6d59faf0cd20c2eb7fef544 44 PANTHER PTHR14503:SF0 1 44 3.3E-22 T 14-09-2016 AMK01_RS02375 17e1e1cba6d59faf0cd20c2eb7fef544 44 Pfam PF00468 Ribosomal protein L34 1 44 2.8E-24 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS02375 17e1e1cba6d59faf0cd20c2eb7fef544 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.76 T 14-09-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 SMART SM00388 261 330 9.9E-24 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 Gene3D G3DSA:3.30.565.10 317 488 1.7E-38 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 Gene3D G3DSA:1.10.287.130 253 316 3.5E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 330 4.0E-21 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 SUPERFAMILY SSF55874 319 487 1.7E-39 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 SMART SM00387 376 489 2.5E-31 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 5.3E-10 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 5.3E-10 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 5.3E-10 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 PANTHER PTHR24423 1 6 5.1E-80 T 14-09-2016 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 PANTHER PTHR24423:SF490 240 495 5.1E-80 T 14-09-2016 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 487 1.0E-21 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 PANTHER PTHR24423 240 495 5.1E-80 T 14-09-2016 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 SUPERFAMILY SSF47384 250 331 2.75E-22 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS12480 be82c7d64ff91e67dc02e91cb0ef2ad4 511 PANTHER PTHR24423:SF490 1 6 5.1E-80 T 14-09-2016 AMK01_RS07730 2d3103acbccded4f569e24795939e3cf 712 Pfam PF03030 Inorganic H+ pyrophosphatase 13 705 5.7E-251 T 14-09-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMK01_RS07730 2d3103acbccded4f569e24795939e3cf 712 PANTHER PTHR31998 3 711 0.0 T 14-09-2016 AMK01_RS07730 2d3103acbccded4f569e24795939e3cf 712 PIRSF PIRSF001265 1 712 1.1E-236 T 14-09-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMK01_RS07730 2d3103acbccded4f569e24795939e3cf 712 PANTHER PTHR31998:SF0 3 711 0.0 T 14-09-2016 AMK01_RS07730 2d3103acbccded4f569e24795939e3cf 712 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 711 24.823 T 14-09-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMK01_RS07730 2d3103acbccded4f569e24795939e3cf 712 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 5 711 4.1E-261 T 14-09-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 Gene3D G3DSA:3.20.20.60 255 524 2.2E-67 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 Gene3D G3DSA:1.10.274.10 50 136 4.1E-17 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 SUPERFAMILY SSF51621 249 525 1.6E-69 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 PANTHER PTHR22931 50 534 6.9E-96 T 14-09-2016 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 SUPERFAMILY SSF47831 49 146 1.31E-18 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 223 1.6E-9 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 Pfam PF05524 PEP-utilising enzyme, N-terminal 9 129 4.2E-15 T 14-09-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 SUPERFAMILY SSF52009 129 233 7.85E-18 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 Gene3D G3DSA:3.50.30.10 137 228 3.0E-17 T 14-09-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 253 521 1.1E-67 T 14-09-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMK01_RS13005 64b95aa11ec8939964fa302d9799a3c6 534 PANTHER PTHR22931:SF15 50 534 6.9E-96 T 14-09-2016 AMK01_RS09355 4286a37468db5ed123e52788c29ab9a8 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 1.2E-6 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS09355 4286a37468db5ed123e52788c29ab9a8 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 1.2E-6 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS09355 4286a37468db5ed123e52788c29ab9a8 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 78 2.4E-11 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS09355 4286a37468db5ed123e52788c29ab9a8 219 SUPERFAMILY SSF48498 106 218 9.64E-9 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS09355 4286a37468db5ed123e52788c29ab9a8 219 SUPERFAMILY SSF46689 20 91 2.46E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS09355 4286a37468db5ed123e52788c29ab9a8 219 PANTHER PTHR30055 16 191 9.9E-18 T 14-09-2016 AMK01_RS09355 4286a37468db5ed123e52788c29ab9a8 219 Gene3D G3DSA:1.10.357.10 17 214 2.1E-28 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 SMART SM01049 33 127 1.4E-40 T 14-09-2016 IPR033480 Single Cache domain 2 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 Gene3D G3DSA:3.30.450.20 23 179 1.0E-56 T 14-09-2016 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 SMART SM00283 343 590 3.0E-102 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 SUPERFAMILY SSF158472 210 259 2.48E-8 T 14-09-2016 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 Pfam PF00672 HAMP domain 191 258 5.4E-12 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 410 589 2.6E-57 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 Pfam PF17200 Single Cache domain 2 37 181 1.1E-45 T 14-09-2016 IPR033480 Single Cache domain 2 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 PANTHER PTHR32089 64 245 3.6E-115 T 14-09-2016 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 PANTHER PTHR32089 325 593 3.6E-115 T 14-09-2016 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 SUPERFAMILY SSF58104 318 591 1.31E-67 T 14-09-2016 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 Gene3D G3DSA:1.10.287.950 358 562 8.6E-58 T 14-09-2016 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 SMART SM00304 210 263 8.9E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS13070 dd875ed82dbf2b219cee7bde15bc3593 606 SMART SM00304 291 342 0.67 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS11500 782fad4d075dbd67961221ae61fbfde2 346 PANTHER PTHR34135 137 337 1.1E-58 T 14-09-2016 AMK01_RS11500 782fad4d075dbd67961221ae61fbfde2 346 PANTHER PTHR34135:SF2 137 337 1.1E-58 T 14-09-2016 AMK01_RS11500 782fad4d075dbd67961221ae61fbfde2 346 Pfam PF01183 Glycosyl hydrolases family 25 146 323 1.8E-58 T 14-09-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AMK01_RS11500 782fad4d075dbd67961221ae61fbfde2 346 SUPERFAMILY SSF51445 141 343 4.0E-69 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS11500 782fad4d075dbd67961221ae61fbfde2 346 Gene3D G3DSA:3.20.20.80 142 343 9.2E-70 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS11500 782fad4d075dbd67961221ae61fbfde2 346 SMART SM00641 143 246 5.2E-19 T 14-09-2016 IPR018077 Glycoside hydrolase, family 25 subgroup AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 44.524 T 14-09-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-09-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 4.4E-63 T 14-09-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 PIRSF PIRSF005901 2 188 4.4E-60 T 14-09-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 SUPERFAMILY SSF50249 67 128 4.71E-17 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 PANTHER PTHR30053:SF1 1 188 1.9E-79 T 14-09-2016 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 Gene3D G3DSA:2.40.50.140 130 187 2.9E-22 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 SUPERFAMILY SSF50104 6 65 1.44E-12 T 14-09-2016 IPR008991 Translation protein SH3-like domain AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 SMART SM00841 131 186 4.8E-26 T 14-09-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 SMART SM01185 69 123 1.1E-24 T 14-09-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 SUPERFAMILY SSF50249 130 187 3.94E-16 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 1.7E-16 T 14-09-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 3.9E-21 T 14-09-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 6.0E-21 T 14-09-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 Gene3D G3DSA:2.30.30.30 6 65 2.4E-18 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 Gene3D G3DSA:2.40.50.140 67 128 1.1E-23 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS20740 a5a2822f536ce3f670b0fb425fc55c78 189 PANTHER PTHR30053 1 188 1.9E-79 T 14-09-2016 AMK01_RS01760 605e997a7c6eaccddb3bd42e61f35bfb 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 23 164 3.0E-17 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS01760 605e997a7c6eaccddb3bd42e61f35bfb 193 SUPERFAMILY SSF53254 20 178 1.82E-23 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS01760 605e997a7c6eaccddb3bd42e61f35bfb 193 Gene3D G3DSA:3.40.50.1240 4 191 3.1E-67 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 SMART SM00267 339 511 1.2E-59 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 346 508 1.6E-39 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 Pfam PF13188 PAS domain 244 284 5.0E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 Gene3D G3DSA:3.20.20.450 524 760 1.0E-90 T 14-09-2016 IPR001633 EAL domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 SUPERFAMILY SSF141868 526 758 2.75E-85 T 14-09-2016 IPR001633 EAL domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 PANTHER PTHR10799:SF657 131 279 2.6E-76 T 14-09-2016 AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 SMART SM00052 521 764 5.3E-99 T 14-09-2016 IPR001633 EAL domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 SUPERFAMILY SSF55785 259 346 4.71E-10 T 14-09-2016 IPR000014 PAS domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 PANTHER PTHR10799 131 279 2.6E-76 T 14-09-2016 AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 247 345 8.9E-9 T 14-09-2016 IPR000014 PAS domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 PANTHER PTHR10799:SF657 383 621 2.6E-76 T 14-09-2016 AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 Pfam PF00990 Diguanylate cyclase, GGDEF domain 350 506 2.1E-46 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 Gene3D G3DSA:3.30.450.20 244 337 1.6E-5 T 14-09-2016 AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 Pfam PF03707 Bacterial signalling protein N terminal repeat 121 174 2.4E-8 T 14-09-2016 IPR005330 MHYT domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 Pfam PF03707 Bacterial signalling protein N terminal repeat 58 116 4.1E-15 T 14-09-2016 IPR005330 MHYT domain AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 Gene3D G3DSA:3.30.70.270 351 518 9.1E-53 T 14-09-2016 AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 SUPERFAMILY SSF55073 355 512 3.77E-45 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 PANTHER PTHR10799 383 621 2.6E-76 T 14-09-2016 AMK01_RS00900 d0dae37c926e90b2e3ec91c0c3ee87a6 795 Pfam PF00563 EAL domain 527 758 1.5E-70 T 14-09-2016 IPR001633 EAL domain AMK01_RS03150 45a93d1550bc8345267d419067a3c373 450 SUPERFAMILY SSF55781 151 315 4.71E-20 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS03150 45a93d1550bc8345267d419067a3c373 450 Pfam PF13185 GAF domain 162 314 3.0E-12 T 14-09-2016 IPR003018 GAF domain GO:0005515 AMK01_RS03150 45a93d1550bc8345267d419067a3c373 450 SMART SM00065 163 324 4.3E-8 T 14-09-2016 IPR003018 GAF domain GO:0005515 AMK01_RS03150 45a93d1550bc8345267d419067a3c373 450 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 19 79 1.0E-6 T 14-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS03150 45a93d1550bc8345267d419067a3c373 450 Gene3D G3DSA:3.30.450.40 150 318 4.1E-23 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS03150 45a93d1550bc8345267d419067a3c373 450 SUPERFAMILY SSF50475 19 102 1.37E-10 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS03150 45a93d1550bc8345267d419067a3c373 450 PANTHER PTHR40660 1 135 8.4E-22 T 14-09-2016 AMK01_RS03150 45a93d1550bc8345267d419067a3c373 450 Gene3D G3DSA:2.30.110.10 19 102 1.5E-11 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS06300 d15182bee7c194101a1d3175138d7467 174 Gene3D G3DSA:3.30.70.1280 1 88 8.1E-34 T 14-09-2016 AMK01_RS06300 d15182bee7c194101a1d3175138d7467 174 Pfam PF08002 Protein of unknown function (DUF1697) 1 132 3.1E-42 T 14-09-2016 IPR012545 Protein of unknown function DUF1697 AMK01_RS06300 d15182bee7c194101a1d3175138d7467 174 SUPERFAMILY SSF160379 1 167 7.98E-51 T 14-09-2016 AMK01_RS06300 d15182bee7c194101a1d3175138d7467 174 PANTHER PTHR36439 1 170 2.8E-41 T 14-09-2016 AMK01_RS06300 d15182bee7c194101a1d3175138d7467 174 PANTHER PTHR36439:SF1 1 170 2.8E-41 T 14-09-2016 AMK01_RS06300 d15182bee7c194101a1d3175138d7467 174 PIRSF PIRSF008502 1 170 4.3E-42 T 14-09-2016 IPR012545 Protein of unknown function DUF1697 AMK01_RS12120 f6da1bbd8f7817d4fc63a06fef5745ea 457 SUPERFAMILY SSF51569 2 445 1.54E-200 T 14-09-2016 AMK01_RS12120 f6da1bbd8f7817d4fc63a06fef5745ea 457 PANTHER PTHR21337 2 453 4.4E-288 T 14-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS12120 f6da1bbd8f7817d4fc63a06fef5745ea 457 Pfam PF01474 Class-II DAHP synthetase family 5 441 7.9E-203 T 14-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS12120 f6da1bbd8f7817d4fc63a06fef5745ea 457 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 445 5.2E-215 T 14-09-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS16195 fa7cccdae103b1385f8046e9eef313ca 324 PANTHER PTHR22935 20 297 1.8E-38 T 14-09-2016 AMK01_RS16195 fa7cccdae103b1385f8046e9eef313ca 324 Gene3D G3DSA:3.40.710.10 11 314 2.4E-46 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS16195 fa7cccdae103b1385f8046e9eef313ca 324 Pfam PF00144 Beta-lactamase 12 297 1.2E-26 T 14-09-2016 IPR001466 Beta-lactamase-related AMK01_RS16195 fa7cccdae103b1385f8046e9eef313ca 324 SUPERFAMILY SSF56601 11 309 3.31E-65 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS16195 fa7cccdae103b1385f8046e9eef313ca 324 PANTHER PTHR22935:SF80 20 297 1.8E-38 T 14-09-2016 AMK01_RS17415 00242785423eba0e5a4ef22f4480f139 459 PANTHER PTHR33619:SF2 40 164 1.2E-16 T 14-09-2016 AMK01_RS17415 00242785423eba0e5a4ef22f4480f139 459 Pfam PF10531 SLBB domain 122 155 7.8E-7 T 14-09-2016 IPR019554 Soluble ligand binding domain AMK01_RS17415 00242785423eba0e5a4ef22f4480f139 459 PANTHER PTHR33619 40 164 1.2E-16 T 14-09-2016 AMK01_RS17415 00242785423eba0e5a4ef22f4480f139 459 Gene3D G3DSA:3.30.1950.10 38 105 2.2E-9 T 14-09-2016 AMK01_RS17415 00242785423eba0e5a4ef22f4480f139 459 Gene3D G3DSA:3.10.560.10 119 160 2.2E-5 T 14-09-2016 AMK01_RS17415 00242785423eba0e5a4ef22f4480f139 459 Pfam PF02563 Polysaccharide biosynthesis/export protein 31 102 4.1E-10 T 14-09-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMK01_RS18435 3f7ce9ec5bad7ca358f188419e25dd21 120 Pfam PF00072 Response regulator receiver domain 5 114 3.1E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18435 3f7ce9ec5bad7ca358f188419e25dd21 120 PANTHER PTHR26402 3 119 6.7E-32 T 14-09-2016 AMK01_RS18435 3f7ce9ec5bad7ca358f188419e25dd21 120 SUPERFAMILY SSF52172 4 119 2.99E-30 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS18435 3f7ce9ec5bad7ca358f188419e25dd21 120 PANTHER PTHR26402:SF481 3 119 6.7E-32 T 14-09-2016 AMK01_RS18435 3f7ce9ec5bad7ca358f188419e25dd21 120 SMART SM00448 3 114 4.0E-20 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18435 3f7ce9ec5bad7ca358f188419e25dd21 120 Gene3D G3DSA:3.40.50.2300 3 119 3.5E-33 T 14-09-2016 AMK01_RS19655 96ee8f6c8e3a794fdf13102402eafb91 93 PANTHER PTHR12735:SF3 5 81 4.0E-21 T 14-09-2016 AMK01_RS19655 96ee8f6c8e3a794fdf13102402eafb91 93 PIRSF PIRSF003113 1 93 4.4E-27 T 14-09-2016 IPR002634 BolA protein AMK01_RS19655 96ee8f6c8e3a794fdf13102402eafb91 93 PANTHER PTHR12735 5 81 4.0E-21 T 14-09-2016 AMK01_RS19655 96ee8f6c8e3a794fdf13102402eafb91 93 Pfam PF01722 BolA-like protein 11 89 2.4E-27 T 14-09-2016 IPR002634 BolA protein AMK01_RS19655 96ee8f6c8e3a794fdf13102402eafb91 93 SUPERFAMILY SSF82657 3 92 4.97E-23 T 14-09-2016 IPR002634 BolA protein AMK01_RS19655 96ee8f6c8e3a794fdf13102402eafb91 93 Gene3D G3DSA:3.30.70.1500 3 82 1.3E-26 T 14-09-2016 AMK01_RS08165 df93c20ae20c8df79b943298894ba7b0 481 PANTHER PTHR22773 4 469 3.4E-171 T 14-09-2016 AMK01_RS08165 df93c20ae20c8df79b943298894ba7b0 481 Pfam PF00361 Proton-conducting membrane transporter 125 420 3.9E-87 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK01_RS08165 df93c20ae20c8df79b943298894ba7b0 481 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 13 459 9.6E-149 T 14-09-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMK01_RS08165 df93c20ae20c8df79b943298894ba7b0 481 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 470 18.415 T 14-09-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMK01_RS08165 df93c20ae20c8df79b943298894ba7b0 481 PANTHER PTHR22773:SF41 4 469 3.4E-171 T 14-09-2016 AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PANTHER PTHR24322 153 184 4.5E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PANTHER PTHR24322 9 137 4.5E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PANTHER PTHR24322:SF57 153 184 4.5E-34 T 14-09-2016 AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PANTHER PTHR24322:SF57 9 137 4.5E-34 T 14-09-2016 AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 Pfam PF00106 short chain dehydrogenase 5 194 5.4E-45 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 2.1E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.1E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 Gene3D G3DSA:3.40.50.720 4 233 2.0E-58 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.6E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.6E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.6E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19250 e873b1e75c39acca22739fc473f33b7e 235 SUPERFAMILY SSF51735 4 233 1.2E-56 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 PANTHER PTHR30580 12 738 7.7E-213 T 14-09-2016 AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 TIGRFAM TIGR00595 priA: primosomal protein N' 229 734 1.2E-180 T 14-09-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 Gene3D G3DSA:3.40.50.300 204 388 9.7E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 SUPERFAMILY SSF52540 205 379 1.63E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 SMART SM00487 201 400 8.9E-16 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 Hamap MF_00983 Probable primosomal protein N' [priA]. 24 737 23.385 T 14-09-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 SUPERFAMILY SSF52540 470 618 1.97E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 Gene3D G3DSA:3.40.50.300 464 644 6.7E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 SMART SM00490 503 600 5.4E-4 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS19925 c47341f0ba445899dd48b37f909ec036 738 Pfam PF00270 DEAD/DEAH box helicase 227 368 6.4E-10 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS01860 03d4e2bc3812a9fc70590a93103deb94 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 115 1.7E-21 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS01860 03d4e2bc3812a9fc70590a93103deb94 133 PANTHER PTHR33337:SF14 1 133 6.0E-35 T 14-09-2016 AMK01_RS01860 03d4e2bc3812a9fc70590a93103deb94 133 SUPERFAMILY SSF51316 1 131 4.5E-38 T 14-09-2016 IPR011057 Mss4-like AMK01_RS01860 03d4e2bc3812a9fc70590a93103deb94 133 Gene3D G3DSA:3.90.1590.10 1 131 8.0E-35 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS01860 03d4e2bc3812a9fc70590a93103deb94 133 PANTHER PTHR33337 1 133 6.0E-35 T 14-09-2016 AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 5.2E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.2E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 180 1.7E-5 T 14-09-2016 AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 Gene3D G3DSA:3.40.50.720 1 247 1.4E-82 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PANTHER PTHR24322:SF450 10 181 3.6E-55 T 14-09-2016 AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 1.4E-63 T 14-09-2016 AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 SUPERFAMILY SSF51735 5 246 1.1E-80 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.5E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.5E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.5E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.5E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 PANTHER PTHR24322 10 181 3.6E-55 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08905 480adef90257ffacd6389c4f2b846cfe 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS20595 6acef47657bcb2fb0f555ef48e1f4e74 304 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 223 235 - T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK01_RS20595 6acef47657bcb2fb0f555ef48e1f4e74 304 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 107 - T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK01_RS20595 6acef47657bcb2fb0f555ef48e1f4e74 304 Gene3D G3DSA:1.10.600.10 7 302 3.1E-89 T 14-09-2016 IPR008949 Isoprenoid synthase domain AMK01_RS20595 6acef47657bcb2fb0f555ef48e1f4e74 304 PANTHER PTHR12001:SF23 8 303 1.7E-88 T 14-09-2016 AMK01_RS20595 6acef47657bcb2fb0f555ef48e1f4e74 304 PANTHER PTHR12001 8 303 1.7E-88 T 14-09-2016 IPR017446 Polyprenyl synthetase-related AMK01_RS20595 6acef47657bcb2fb0f555ef48e1f4e74 304 Pfam PF00348 Polyprenyl synthetase 40 272 8.4E-55 T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK01_RS20595 6acef47657bcb2fb0f555ef48e1f4e74 304 SUPERFAMILY SSF48576 37 293 9.25E-80 T 14-09-2016 IPR008949 Isoprenoid synthase domain AMK01_RS09825 d3185fd0e0473b8d0cea2e4280aa187a 84 PANTHER PTHR33884 1 83 2.0E-13 T 14-09-2016 AMK01_RS09825 d3185fd0e0473b8d0cea2e4280aa187a 84 Pfam PF04226 Transglycosylase associated protein 37 83 5.5E-10 T 14-09-2016 IPR007341 Transglycosylase-associated protein GO:0016021 AMK01_RS20745 cf4400df4fa4d2da4abfb4fb77b02d6d 353 Gene3D G3DSA:3.30.930.10 22 347 1.3E-64 T 14-09-2016 AMK01_RS20745 cf4400df4fa4d2da4abfb4fb77b02d6d 353 PANTHER PTHR22594 23 343 2.7E-108 T 14-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS20745 cf4400df4fa4d2da4abfb4fb77b02d6d 353 Pfam PF00152 tRNA synthetases class II (D, K and N) 22 345 8.7E-34 T 14-09-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS20745 cf4400df4fa4d2da4abfb4fb77b02d6d 353 SUPERFAMILY SSF55681 19 348 2.6E-70 T 14-09-2016 AMK01_RS20745 cf4400df4fa4d2da4abfb4fb77b02d6d 353 PANTHER PTHR22594:SF7 23 343 2.7E-108 T 14-09-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AMK01_RS20745 cf4400df4fa4d2da4abfb4fb77b02d6d 353 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 25 345 3.5E-115 T 14-09-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AMK01_RS12420 d86dec126774ebcd0c36494efd6adb91 107 SUPERFAMILY SSF46785 8 98 5.89E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12420 d86dec126774ebcd0c36494efd6adb91 107 Pfam PF12840 Helix-turn-helix domain 8 66 4.5E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12420 d86dec126774ebcd0c36494efd6adb91 107 Gene3D G3DSA:1.10.10.10 7 106 2.7E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12420 d86dec126774ebcd0c36494efd6adb91 107 PANTHER PTHR33154 8 98 4.7E-21 T 14-09-2016 AMK01_RS12420 d86dec126774ebcd0c36494efd6adb91 107 SMART SM00418 7 82 4.3E-19 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12420 d86dec126774ebcd0c36494efd6adb91 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 3.7E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12420 d86dec126774ebcd0c36494efd6adb91 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 3.7E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12420 d86dec126774ebcd0c36494efd6adb91 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 3.7E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS20125 1b227b4e555b9a9b8f963c54207b5955 178 Pfam PF00719 Inorganic pyrophosphatase 18 173 5.2E-53 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK01_RS20125 1b227b4e555b9a9b8f963c54207b5955 178 SUPERFAMILY SSF50324 4 175 6.93E-67 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK01_RS20125 1b227b4e555b9a9b8f963c54207b5955 178 PANTHER PTHR10286 6 175 1.0E-66 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK01_RS20125 1b227b4e555b9a9b8f963c54207b5955 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.945 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK01_RS20125 1b227b4e555b9a9b8f963c54207b5955 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK01_RS20125 1b227b4e555b9a9b8f963c54207b5955 178 Gene3D G3DSA:3.90.80.10 5 175 1.6E-60 T 14-09-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 Gene3D G3DSA:1.20.1560.10 9 309 6.0E-37 T 14-09-2016 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 SUPERFAMILY SSF90123 10 299 2.49E-44 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 SUPERFAMILY SSF90123 476 484 2.49E-44 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 Pfam PF00664 ABC transporter transmembrane region 23 287 2.9E-35 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 Gene3D G3DSA:3.40.50.300 334 563 1.4E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 Pfam PF00005 ABC transporter 351 500 1.1E-37 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 PANTHER PTHR24221 11 577 1.3E-165 T 14-09-2016 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 TIGRFAM TIGR01192 chvA: glucan exporter ATP-binding protein 1 583 0.0 T 14-09-2016 IPR005896 Glucan exporter ATP-binding protein, NdvA GO:0005886|GO:0015441|GO:0015775 AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 SUPERFAMILY SSF52540 328 568 2.61E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20540 00ddde552a112fe1ab6ac919bac4bc3e 587 SMART SM00382 360 552 1.0E-19 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 SUPERFAMILY SSF51735 10 239 3.94E-54 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 Pfam PF00106 short chain dehydrogenase 12 209 2.1E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 Gene3D G3DSA:3.40.50.720 11 213 2.9E-55 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PANTHER PTHR24322 16 146 1.2E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 6.2E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.2E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 6.2E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.9E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 6.9E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 6.9E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 6.9E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.9E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PANTHER PTHR24322 162 197 1.2E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PANTHER PTHR24322:SF363 162 197 1.2E-38 T 14-09-2016 AMK01_RS20170 63e956a7d5ccf16e7ce0edcab00c2513 283 PANTHER PTHR24322:SF363 16 146 1.2E-38 T 14-09-2016 AMK01_RS10765 22b84c41cca4d35f1f3fdaaad6cdffb6 223 PANTHER PTHR13887 1 219 5.8E-59 T 14-09-2016 AMK01_RS10765 22b84c41cca4d35f1f3fdaaad6cdffb6 223 Gene3D G3DSA:3.40.30.10 2 209 5.7E-53 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS10765 22b84c41cca4d35f1f3fdaaad6cdffb6 223 Pfam PF01323 DSBA-like thioredoxin domain 5 208 2.9E-47 T 14-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AMK01_RS10765 22b84c41cca4d35f1f3fdaaad6cdffb6 223 PANTHER PTHR13887:SF10 1 219 5.8E-59 T 14-09-2016 AMK01_RS10765 22b84c41cca4d35f1f3fdaaad6cdffb6 223 SUPERFAMILY SSF52833 4 214 5.27E-52 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS02105 6f1eebdb819a3b933886698426b330cd 163 Pfam PF00582 Universal stress protein family 13 150 2.4E-18 T 14-09-2016 IPR006016 UspA GO:0006950 AMK01_RS02105 6f1eebdb819a3b933886698426b330cd 163 Gene3D G3DSA:3.40.50.620 14 150 1.2E-20 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS02105 6f1eebdb819a3b933886698426b330cd 163 SUPERFAMILY SSF52402 14 151 5.53E-15 T 14-09-2016 AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Pfam PF02151 UvrB/uvrC motif 796 827 4.1E-9 T 14-09-2016 IPR001943 UVR domain GO:0005515 AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Gene3D G3DSA:3.40.50.300 171 324 3.4E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Gene3D G3DSA:3.40.50.300 413 501 4.3E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Gene3D G3DSA:3.40.50.300 551 572 4.3E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Pfam PF04851 Type III restriction enzyme, res subunit 176 302 2.3E-12 T 14-09-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Gene3D G3DSA:4.10.860.10 789 830 8.0E-17 T 14-09-2016 IPR001943 UVR domain GO:0005515 AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 PANTHER PTHR24029 162 850 0.0 T 14-09-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Gene3D G3DSA:3.40.50.300 585 744 5.3E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 SMART SM00487 172 589 3.3E-25 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Gene3D G3DSA:3.30.2060.10 325 396 2.2E-11 T 14-09-2016 AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 169 826 0.0 T 14-09-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Pfam PF00271 Helicase conserved C-terminal domain 602 708 4.3E-18 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Pfam PF12344 Ultra-violet resistance protein B 715 756 4.4E-21 T 14-09-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 SMART SM00490 623 709 4.1E-18 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 Hamap MF_00204 UvrABC system protein B [uvrB]. 166 828 41.423 T 14-09-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 SUPERFAMILY SSF52540 172 576 2.11E-131 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 SUPERFAMILY SSF52540 622 747 1.42E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 SUPERFAMILY SSF52540 196 245 1.42E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13155 18c0150a0392e6ba357c544101c2619e 1002 SUPERFAMILY SSF46600 787 828 1.83E-10 T 14-09-2016 IPR001943 UVR domain GO:0005515 AMK01_RS00070 c1555536c31dd43b19c765bf1250dae2 199 SUPERFAMILY SSF55469 8 194 1.83E-46 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AMK01_RS00070 c1555536c31dd43b19c765bf1250dae2 199 PANTHER PTHR23026 16 198 4.0E-23 T 14-09-2016 AMK01_RS00070 c1555536c31dd43b19c765bf1250dae2 199 Gene3D G3DSA:3.40.109.10 3 193 5.7E-47 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AMK01_RS00070 c1555536c31dd43b19c765bf1250dae2 199 Pfam PF00881 Nitroreductase family 19 60 9.7E-11 T 14-09-2016 IPR029479 Nitroreductase AMK01_RS00070 c1555536c31dd43b19c765bf1250dae2 199 Pfam PF00881 Nitroreductase family 74 164 1.3E-5 T 14-09-2016 IPR029479 Nitroreductase AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SUPERFAMILY SSF54211 295 489 3.54E-49 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 692 0.0 T 14-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Pfam PF00013 KH domain 557 614 2.9E-10 T 14-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SMART SM00322 553 618 3.7E-12 T 14-09-2016 IPR004087 K Homology domain GO:0003676 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Pfam PF00575 S1 RNA binding domain 619 691 1.1E-16 T 14-09-2016 IPR003029 S1 domain GO:0003676 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 5.2E-22 T 14-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Pfam PF01138 3' exoribonuclease family, domain 1 13 144 5.0E-23 T 14-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Gene3D G3DSA:3.30.1370.10 553 626 1.3E-25 T 14-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Gene3D G3DSA:2.40.50.140 627 708 1.7E-23 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 7.9E-13 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Pfam PF03725 3' exoribonuclease family, domain 2 461 528 1.4E-4 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SUPERFAMILY SSF55666 145 235 5.75E-30 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 PANTHER PTHR11252 1 712 0.0 T 14-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SUPERFAMILY SSF46915 240 322 2.38E-18 T 14-09-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 321 3.7E-24 T 14-09-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SUPERFAMILY SSF54791 556 641 2.16E-22 T 14-09-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Gene3D G3DSA:3.30.230.70 5 224 1.5E-88 T 14-09-2016 IPR027408 PNPase/RNase PH domain AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Gene3D G3DSA:3.30.230.70 314 544 2.6E-88 T 14-09-2016 IPR027408 PNPase/RNase PH domain AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 694 30.803 T 14-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 PIRSF PIRSF005499 1 712 6.8E-299 T 14-09-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 PANTHER PTHR11252:SF0 1 712 0.0 T 14-09-2016 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SMART SM00316 621 691 2.7E-21 T 14-09-2016 IPR022967 RNA-binding domain, S1 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 Gene3D G3DSA:1.10.10.400 240 313 5.9E-24 T 14-09-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SUPERFAMILY SSF55666 451 546 5.05E-27 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SUPERFAMILY SSF54211 3 144 6.07E-52 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS00705 b7c6c00831813b7fc0c64f2d33f018ca 712 SUPERFAMILY SSF50249 621 704 2.2E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS18790 a5ca33f97e8f08f904a11065037a479a 309 SMART SM00450 120 221 1.6E-20 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS18790 a5ca33f97e8f08f904a11065037a479a 309 Hamap MF_00469 UPF0176 protein YceA [yceA]. 9 261 45.887 T 14-09-2016 IPR020936 Uncharacterised protein family UPF0176 AMK01_RS18790 a5ca33f97e8f08f904a11065037a479a 309 SUPERFAMILY SSF52821 97 232 4.39E-30 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS18790 a5ca33f97e8f08f904a11065037a479a 309 Gene3D G3DSA:3.40.250.10 111 233 1.3E-41 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS18790 a5ca33f97e8f08f904a11065037a479a 309 Pfam PF00581 Rhodanese-like domain 126 217 3.6E-8 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS18790 a5ca33f97e8f08f904a11065037a479a 309 PANTHER PTHR22778:SF12 12 295 1.0E-119 T 14-09-2016 AMK01_RS18790 a5ca33f97e8f08f904a11065037a479a 309 PANTHER PTHR22778 12 295 1.0E-119 T 14-09-2016 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 365 48.29 T 14-09-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 360 3.0E-135 T 14-09-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 PANTHER PTHR11835:SF35 5 368 1.5E-176 T 14-09-2016 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 14-09-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 SMART SM01329 5 361 1.3E-175 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 Gene3D G3DSA:3.40.718.10 4 365 5.3E-119 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 PANTHER PTHR11835 5 368 1.5E-176 T 14-09-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 SUPERFAMILY SSF53659 5 366 2.52E-109 T 14-09-2016 AMK01_RS21025 3385838c36a13b24eec81cfa75a91bbc 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 361 2.8E-132 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK01_RS12220 f5cd4fe2fa8f600d89f903540d693e17 378 Pfam PF01497 Periplasmic binding protein 101 319 3.5E-23 T 14-09-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AMK01_RS12220 f5cd4fe2fa8f600d89f903540d693e17 378 PANTHER PTHR30535 1 376 1.2E-62 T 14-09-2016 AMK01_RS12220 f5cd4fe2fa8f600d89f903540d693e17 378 PANTHER PTHR30535:SF5 1 376 1.2E-62 T 14-09-2016 AMK01_RS12220 f5cd4fe2fa8f600d89f903540d693e17 378 Gene3D G3DSA:3.40.50.1980 43 183 1.2E-11 T 14-09-2016 AMK01_RS12220 f5cd4fe2fa8f600d89f903540d693e17 378 SUPERFAMILY SSF53807 28 345 8.24E-49 T 14-09-2016 AMK01_RS12220 f5cd4fe2fa8f600d89f903540d693e17 378 Gene3D G3DSA:3.40.50.1980 187 343 3.6E-27 T 14-09-2016 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 Gene3D G3DSA:1.10.287.130 245 309 3.5E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 SUPERFAMILY SSF47384 241 311 1.29E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 SUPERFAMILY SSF55874 331 457 1.17E-28 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 SMART SM00304 202 254 0.0039 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 PANTHER PTHR24423 18 31 6.1E-43 T 14-09-2016 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 PANTHER PTHR24423 196 457 6.1E-43 T 14-09-2016 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 SMART SM00387 351 458 9.9E-22 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 457 4.9E-15 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 SMART SM00388 255 313 1.4E-4 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 5.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 5.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 5.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 5.6E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS15335 6c52ef9fe591c47d3d983f8caeb8ce18 458 Gene3D G3DSA:3.30.565.10 325 457 1.7E-29 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12350 9f32e760a297042c3010c70f8804fd5f 726 SUPERFAMILY SSF103088 600 713 1.02E-24 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS12350 9f32e760a297042c3010c70f8804fd5f 726 PANTHER PTHR30128 596 712 3.4E-26 T 14-09-2016 AMK01_RS12350 9f32e760a297042c3010c70f8804fd5f 726 PRINTS PR01021 OMPA domain signature 660 676 8.3E-6 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK01_RS12350 9f32e760a297042c3010c70f8804fd5f 726 PRINTS PR01021 OMPA domain signature 645 660 8.3E-6 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK01_RS12350 9f32e760a297042c3010c70f8804fd5f 726 Pfam PF00691 OmpA family 610 707 3.2E-19 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS12350 9f32e760a297042c3010c70f8804fd5f 726 Gene3D G3DSA:3.30.1330.60 600 713 3.9E-28 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 PANTHER PTHR11993 1 391 5.1E-239 T 14-09-2016 AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 8 396 3.3E-175 T 14-09-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 122 396 1.3E-119 T 14-09-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 396 48.113 T 14-09-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 PANTHER PTHR11993:SF10 1 391 5.1E-239 T 14-09-2016 AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 Gene3D G3DSA:1.10.645.10 6 233 1.1E-45 T 14-09-2016 IPR029014 NiFe hydrogenase-like AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 Gene3D G3DSA:1.10.645.10 235 388 9.3E-21 T 14-09-2016 IPR029014 NiFe hydrogenase-like AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 SUPERFAMILY SSF56762 18 396 9.94E-137 T 14-09-2016 IPR029014 NiFe hydrogenase-like AMK01_RS08105 ed8fb61ec1abff4050f3b18125eb8146 396 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 45 56 - T 14-09-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 AMK01_RS17465 edcf40b1841995d7bbd41a07a2dc05ba 166 PANTHER PTHR33269:SF1 1 165 4.3E-43 T 14-09-2016 AMK01_RS17465 edcf40b1841995d7bbd41a07a2dc05ba 166 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 160 2.1E-35 T 14-09-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 AMK01_RS17465 edcf40b1841995d7bbd41a07a2dc05ba 166 PANTHER PTHR33269 1 165 4.3E-43 T 14-09-2016 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 SUPERFAMILY SSF46785 2 68 8.3E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 PANTHER PTHR33516 1 74 2.6E-74 T 14-09-2016 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 Gene3D G3DSA:2.10.109.10 116 238 2.3E-39 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 PANTHER PTHR33516:SF2 108 239 2.6E-74 T 14-09-2016 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 SUPERFAMILY SSF51306 114 236 2.62E-33 T 14-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 Pfam PF01726 LexA DNA binding domain 2 63 2.3E-16 T 14-09-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 Hamap MF_00015 LexA repressor [lexA]. 1 238 34.382 T 14-09-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 Pfam PF00717 Peptidase S24-like 154 218 3.3E-14 T 14-09-2016 IPR019759 Peptidase S24/S26A/S26B AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 191 203 2.5E-10 T 14-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 173 2.5E-10 T 14-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 151 161 2.5E-10 T 14-09-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 Gene3D G3DSA:1.10.10.10 2 67 8.4E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 PANTHER PTHR33516:SF2 1 74 2.6E-74 T 14-09-2016 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 PANTHER PTHR33516 108 239 2.6E-74 T 14-09-2016 AMK01_RS09770 11b4189f2604444acbf9f3399ef38749 239 TIGRFAM TIGR00498 lexA: repressor LexA 2 238 3.5E-53 T 14-09-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 PANTHER PTHR26402:SF316 1 219 5.5E-99 T 14-09-2016 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 Gene3D G3DSA:1.10.10.10 122 219 5.5E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 Gene3D G3DSA:3.40.50.2300 1 120 1.4E-36 T 14-09-2016 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 Pfam PF00072 Response regulator receiver domain 3 112 3.9E-24 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 SMART SM00448 1 112 6.1E-40 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 SMART SM00862 145 216 1.9E-24 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 SUPERFAMILY SSF46894 119 217 2.1E-27 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 PANTHER PTHR26402 1 219 5.5E-99 T 14-09-2016 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.1E-23 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS06565 a495ba69d88d1e0b104e61aa0b88bcb7 223 SUPERFAMILY SSF52172 1 118 1.85E-38 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 10 297 27.457 T 14-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 Pfam PF01715 IPP transferase 43 288 3.5E-72 T 14-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 Gene3D G3DSA:3.40.50.300 9 177 3.9E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 SUPERFAMILY SSF52540 11 159 5.58E-27 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 PANTHER PTHR11088 11 292 3.6E-88 T 14-09-2016 AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 292 4.1E-80 T 14-09-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 Gene3D G3DSA:1.10.287.890 206 288 2.6E-31 T 14-09-2016 AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 SUPERFAMILY SSF52540 165 238 4.18E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14335 38414b994c5851597fc2c1b21604f15e 297 SUPERFAMILY SSF52540 11 61 4.18E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00015 26fd9a74111ffccd5dd6c1565b281cea 199 Gene3D G3DSA:3.90.950.10 3 195 1.8E-48 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK01_RS00015 26fd9a74111ffccd5dd6c1565b281cea 199 PIRSF PIRSF006305 1 198 1.4E-38 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AMK01_RS00015 26fd9a74111ffccd5dd6c1565b281cea 199 Pfam PF02545 Maf-like protein 4 193 9.5E-39 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AMK01_RS00015 26fd9a74111ffccd5dd6c1565b281cea 199 Hamap MF_00528 Septum formation protein Maf [maf]. 4 198 26.493 T 14-09-2016 IPR003697 Maf-like protein GO:0005737 AMK01_RS00015 26fd9a74111ffccd5dd6c1565b281cea 199 SUPERFAMILY SSF52972 2 193 6.54E-48 T 14-09-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 Pfam PF03129 Anticodon binding domain 348 438 2.5E-18 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 Gene3D G3DSA:3.40.50.800 343 438 1.4E-26 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 224 2.9E-99 T 14-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 Gene3D G3DSA:3.30.930.10 265 341 1.5E-95 T 14-09-2016 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 Gene3D G3DSA:3.30.930.10 6 204 1.5E-95 T 14-09-2016 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 440 61.996 T 14-09-2016 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 SUPERFAMILY SSF55681 10 238 4.77E-93 T 14-09-2016 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 SUPERFAMILY SSF55681 280 351 4.77E-93 T 14-09-2016 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 PANTHER PTHR11451 243 438 2.9E-133 T 14-09-2016 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 PANTHER PTHR11451 4 216 2.9E-133 T 14-09-2016 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-14 T 14-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-14 T 14-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-14 T 14-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-14 T 14-09-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 SUPERFAMILY SSF52954 336 439 6.54E-29 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 PANTHER PTHR11451:SF3 243 438 2.9E-133 T 14-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 PANTHER PTHR11451:SF3 4 216 2.9E-133 T 14-09-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK01_RS08190 57ab4335508c53f8c43a495cd7b87deb 440 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 330 8.2E-35 T 14-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS00655 8179785c19836a2cef463fe7bbba354e 262 Gene3D G3DSA:3.40.50.620 73 215 2.6E-22 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS00655 8179785c19836a2cef463fe7bbba354e 262 PANTHER PTHR30336:SF1 2 258 8.4E-37 T 14-09-2016 AMK01_RS00655 8179785c19836a2cef463fe7bbba354e 262 PANTHER PTHR30336 2 258 8.4E-37 T 14-09-2016 AMK01_RS00655 8179785c19836a2cef463fe7bbba354e 262 Pfam PF02698 DUF218 domain 80 246 6.1E-24 T 14-09-2016 IPR003848 Domain of unknown function DUF218 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 3.5E-17 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 3.5E-17 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.5E-17 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.5E-17 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.3E-27 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 4.3E-27 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 4.3E-27 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.3E-27 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 4.3E-27 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 Gene3D G3DSA:3.50.50.60 231 314 7.2E-12 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 SUPERFAMILY SSF51905 4 189 1.4E-47 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 Gene3D G3DSA:3.50.50.60 3 104 2.2E-29 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 SUPERFAMILY SSF51905 147 336 3.67E-34 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 Gene3D G3DSA:3.50.50.60 105 230 2.3E-37 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PANTHER PTHR22912 3 365 5.2E-97 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 Gene3D G3DSA:3.30.390.30 320 404 9.4E-31 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 301 3.0E-61 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 Pfam PF14759 Reductase C-terminal 320 404 1.6E-30 T 14-09-2016 IPR028202 Reductase, C-terminal AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 PANTHER PTHR22912:SF180 3 365 5.2E-97 T 14-09-2016 AMK01_RS06875 c3215d1cd5a27bdced73ffe69ec5b497 405 SUPERFAMILY SSF55424 312 404 9.61E-29 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 PANTHER PTHR32282:SF2 264 973 0.0 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:1.20.1580.10 715 841 9.9E-53 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 PANTHER PTHR32282:SF2 3 243 0.0 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Pfam PF00005 ABC transporter 827 881 9.9E-6 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Hamap MF_00205 UvrABC system protein A [uvrA]. 4 961 22.613 T 14-09-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:1.20.1580.10 94 132 2.0E-51 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:1.20.1580.10 427 499 2.0E-51 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:1.20.1580.10 272 305 2.0E-51 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 ProSitePatterns PS00211 ABC transporters family signature. 509 523 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:3.40.50.300 842 964 5.3E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:3.40.50.300 3 54 3.5E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:3.40.50.300 624 690 5.3E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:3.40.50.300 500 617 3.5E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 PANTHER PTHR32282 264 973 0.0 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:1.10.8.280 307 426 3.2E-43 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 7 945 0.0 T 14-09-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 PANTHER PTHR32282 3 243 0.0 T 14-09-2016 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:3.30.1490.20 133 156 1.6E-26 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 Gene3D G3DSA:3.30.1490.20 203 242 1.6E-26 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 SUPERFAMILY SSF52540 453 591 3.46E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 SUPERFAMILY SSF52540 6 207 3.46E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 SUPERFAMILY SSF52540 642 931 1.01E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10810 c75c7a8b8594dfcc1ecf60e114f52f85 973 ProSitePatterns PS00211 ABC transporters family signature. 851 865 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 PANTHER PTHR21499 1 424 6.5E-148 T 14-09-2016 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 SUPERFAMILY SSF55021 346 422 5.19E-20 T 14-09-2016 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 Gene3D G3DSA:3.40.1160.10 1 264 1.1E-73 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 Pfam PF00696 Amino acid kinase family 3 237 3.6E-45 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 PANTHER PTHR21499:SF27 1 424 6.5E-148 T 14-09-2016 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 PIRSF PIRSF000726 57 424 1.2E-121 T 14-09-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 Gene3D G3DSA:3.30.70.260 288 352 4.5E-6 T 14-09-2016 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 SUPERFAMILY SSF55021 266 344 5.31E-20 T 14-09-2016 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 Pfam PF01842 ACT domain 285 340 3.1E-12 T 14-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 Pfam PF13840 ACT domain 355 417 8.2E-13 T 14-09-2016 IPR027795 GATS-like ACT domain AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 SUPERFAMILY SSF53633 3 261 3.67E-70 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-09-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 419 8.9E-126 T 14-09-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS19320 76412128666bac44f18f0f401f18a19b 424 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 70 420 7.4E-109 T 14-09-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 424 1.8E-135 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 Gene3D G3DSA:3.40.640.10 7 289 3.3E-110 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 8 424 2.8E-186 T 14-09-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 PIRSF PIRSF001434 1 427 2.7E-122 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 Gene3D G3DSA:3.90.1150.10 291 427 1.8E-50 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 PANTHER PTHR11808:SF12 268 427 3.7E-226 T 14-09-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 PANTHER PTHR11808:SF12 1 238 3.7E-226 T 14-09-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 PANTHER PTHR11808 268 427 3.7E-226 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 PANTHER PTHR11808 1 238 3.7E-226 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS07970 f3aa5bd04c668e22070092644199a880 427 SUPERFAMILY SSF53383 7 424 4.39E-124 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 Gene3D G3DSA:3.40.120.10 1 131 3.8E-27 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 171 253 6.7E-9 T 14-09-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 PANTHER PTHR22573 3 474 8.6E-45 T 14-09-2016 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 SUPERFAMILY SSF53738 241 369 2.83E-7 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 PANTHER PTHR22573:SF15 3 474 8.6E-45 T 14-09-2016 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 1 133 1.1E-28 T 14-09-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 SUPERFAMILY SSF53738 1 130 4.71E-28 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 Gene3D G3DSA:3.40.120.10 188 253 6.4E-4 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 SUPERFAMILY SSF53738 167 253 9.81E-12 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 SUPERFAMILY SSF55957 382 469 7.06E-12 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 Gene3D G3DSA:3.40.120.10 272 372 6.3E-7 T 14-09-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 413 465 1.9E-8 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 Gene3D G3DSA:3.30.310.50 384 468 9.3E-11 T 14-09-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS16730 45b9d92d03b9e7d7ee849bb703c8b613 474 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 369 8.7E-10 T 14-09-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK01_RS12365 6257745dbf27e6c60200b83b89f5112c 276 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 61 166 4.8E-22 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS12365 6257745dbf27e6c60200b83b89f5112c 276 PANTHER PTHR30614 1 276 1.0E-74 T 14-09-2016 AMK01_RS12365 6257745dbf27e6c60200b83b89f5112c 276 SUPERFAMILY SSF161098 60 257 8.11E-40 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12365 6257745dbf27e6c60200b83b89f5112c 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 271 1.9E-19 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12365 6257745dbf27e6c60200b83b89f5112c 276 Gene3D G3DSA:1.10.3720.10 59 271 1.0E-44 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11045 e6ce73908f063e98939b7e8029da83d4 272 Gene3D G3DSA:3.60.15.10 6 268 7.1E-61 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS11045 e6ce73908f063e98939b7e8029da83d4 272 PANTHER PTHR12553:SF7 4 264 5.8E-57 T 14-09-2016 AMK01_RS11045 e6ce73908f063e98939b7e8029da83d4 272 Pfam PF12706 Beta-lactamase superfamily domain 54 240 2.1E-37 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS11045 e6ce73908f063e98939b7e8029da83d4 272 PANTHER PTHR12553 4 264 5.8E-57 T 14-09-2016 AMK01_RS11045 e6ce73908f063e98939b7e8029da83d4 272 SUPERFAMILY SSF56281 6 267 8.52E-46 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS11045 e6ce73908f063e98939b7e8029da83d4 272 SMART SM00849 38 217 1.9E-5 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS18730 80725cfe15505fb31aefeca55dc8467a 341 PANTHER PTHR22935 70 313 1.3E-33 T 14-09-2016 AMK01_RS18730 80725cfe15505fb31aefeca55dc8467a 341 Gene3D G3DSA:3.40.710.10 50 321 9.8E-38 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS18730 80725cfe15505fb31aefeca55dc8467a 341 Pfam PF00144 Beta-lactamase 51 323 2.6E-23 T 14-09-2016 IPR001466 Beta-lactamase-related AMK01_RS18730 80725cfe15505fb31aefeca55dc8467a 341 SUPERFAMILY SSF56601 6 321 1.93E-61 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS18730 80725cfe15505fb31aefeca55dc8467a 341 PANTHER PTHR22935:SF80 70 313 1.3E-33 T 14-09-2016 AMK01_RS04275 9b962ccda4ed946d9bf1a42b23d9ee07 293 SUPERFAMILY SSF52151 18 266 4.71E-40 T 14-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK01_RS04275 9b962ccda4ed946d9bf1a42b23d9ee07 293 PANTHER PTHR14226:SF24 18 271 1.3E-36 T 14-09-2016 AMK01_RS04275 9b962ccda4ed946d9bf1a42b23d9ee07 293 Gene3D G3DSA:3.40.1090.10 24 191 8.3E-10 T 14-09-2016 AMK01_RS04275 9b962ccda4ed946d9bf1a42b23d9ee07 293 PANTHER PTHR14226 18 271 1.3E-36 T 14-09-2016 AMK01_RS04275 9b962ccda4ed946d9bf1a42b23d9ee07 293 Pfam PF01734 Patatin-like phospholipase 23 195 6.7E-24 T 14-09-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 67 80 - T 14-09-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 PANTHER PTHR23133 3 201 5.4E-104 T 14-09-2016 AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 SUPERFAMILY SSF54211 8 92 5.31E-35 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 Gene3D G3DSA:3.30.230.40 96 201 7.1E-32 T 14-09-2016 AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 8 201 43.135 T 14-09-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 SUPERFAMILY SSF54211 94 184 1.09E-33 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 Gene3D G3DSA:3.30.230.40 8 94 2.9E-39 T 14-09-2016 AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 162 174 - T 14-09-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 PANTHER PTHR23133:SF2 3 201 5.4E-104 T 14-09-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK01_RS00245 136de48ecb9927b14f73c85636041851 202 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 37 180 5.0E-64 T 14-09-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 AMK01_RS12665 61e6364e826758b3c556cac71122e62e 401 SUPERFAMILY SSF53901 6 262 3.84E-32 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS12665 61e6364e826758b3c556cac71122e62e 401 Gene3D G3DSA:3.40.47.10 4 269 4.0E-30 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS12665 61e6364e826758b3c556cac71122e62e 401 SUPERFAMILY SSF53901 236 397 4.22E-13 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS12665 61e6364e826758b3c556cac71122e62e 401 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 257 5.6E-17 T 14-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 SUPERFAMILY SSF51735 5 187 1.47E-56 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 284 8.9E-34 T 14-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 PIRSF PIRSF000105 1 292 1.2E-80 T 14-09-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 SUPERFAMILY SSF48179 187 286 3.15E-34 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 185 210 - T 14-09-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 185 4.3E-61 T 14-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 Gene3D G3DSA:1.10.1040.10 191 285 1.7E-36 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 Gene3D G3DSA:3.40.50.720 4 190 3.4E-56 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19505 8f4d5c392836badc1b4a8e8db5f786ce 293 PANTHER PTHR23309 6 291 1.3E-139 T 14-09-2016 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 SMART SM00729 173 393 6.9E-61 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 Gene3D G3DSA:3.80.30.20 173 404 3.5E-78 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 PANTHER PTHR11918 19 463 5.0E-181 T 14-09-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 23 461 4.2E-148 T 14-09-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 Pfam PF01938 TRAM domain 405 463 3.6E-8 T 14-09-2016 IPR002792 TRAM domain AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 Pfam PF00919 Uncharacterized protein family UPF0004 23 126 5.1E-32 T 14-09-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 SUPERFAMILY SSF102114 161 398 2.35E-61 T 14-09-2016 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 22 466 72.901 T 14-09-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 PANTHER PTHR11918:SF43 19 463 5.0E-181 T 14-09-2016 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 23 463 1.7E-149 T 14-09-2016 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 177 197 - T 14-09-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMK01_RS02075 815d2179ef2082251cbaaa045820139b 469 Pfam PF04055 Radical SAM superfamily 178 351 1.9E-31 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS08875 75179d1f780395a91bc9fa74cef1d7f5 258 SUPERFAMILY SSF53218 7 202 3.93E-41 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS08875 75179d1f780395a91bc9fa74cef1d7f5 258 PANTHER PTHR23293 1 182 1.6E-55 T 14-09-2016 AMK01_RS08875 75179d1f780395a91bc9fa74cef1d7f5 258 Gene3D G3DSA:3.40.980.10 7 207 4.4E-39 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS08875 75179d1f780395a91bc9fa74cef1d7f5 258 Pfam PF00994 Probable molybdopterin binding domain 10 170 1.5E-34 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS08875 75179d1f780395a91bc9fa74cef1d7f5 258 PANTHER PTHR23293:SF5 1 182 1.6E-55 T 14-09-2016 AMK01_RS08875 75179d1f780395a91bc9fa74cef1d7f5 258 SMART SM00852 10 172 3.0E-32 T 14-09-2016 IPR001453 MoaB/Mog domain AMK01_RS17925 44da9eb9d69e73d6a81fb87e96fa1c72 167 Gene3D G3DSA:2.30.110.10 9 165 1.0E-47 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS17925 44da9eb9d69e73d6a81fb87e96fa1c72 167 PANTHER PTHR34818 8 153 9.6E-18 T 14-09-2016 AMK01_RS17925 44da9eb9d69e73d6a81fb87e96fa1c72 167 SUPERFAMILY SSF50475 9 138 5.97E-26 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS17925 44da9eb9d69e73d6a81fb87e96fa1c72 167 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 12 154 4.2E-47 T 14-09-2016 AMK01_RS08750 fb40b3f260446a35f5c65523bb01bed7 462 Gene3D G3DSA:3.30.565.10 335 456 7.7E-9 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS08750 fb40b3f260446a35f5c65523bb01bed7 462 SUPERFAMILY SSF55874 334 455 2.1E-14 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS08750 fb40b3f260446a35f5c65523bb01bed7 462 PANTHER PTHR24421 233 454 5.7E-34 T 14-09-2016 AMK01_RS08750 fb40b3f260446a35f5c65523bb01bed7 462 SMART SM00387 367 459 1.2E-4 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS08750 fb40b3f260446a35f5c65523bb01bed7 462 PANTHER PTHR24421:SF23 233 454 5.7E-34 T 14-09-2016 AMK01_RS08750 fb40b3f260446a35f5c65523bb01bed7 462 Pfam PF07730 Histidine kinase 265 325 4.8E-6 T 14-09-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AMK01_RS09370 d0cccf43b5b5125975712004deac3088 234 PANTHER PTHR15032:SF12 1 234 1.2E-43 T 14-09-2016 AMK01_RS09370 d0cccf43b5b5125975712004deac3088 234 SMART SM00849 7 198 4.9E-9 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS09370 d0cccf43b5b5125975712004deac3088 234 Pfam PF13483 Beta-lactamase superfamily domain 2 187 1.0E-17 T 14-09-2016 AMK01_RS09370 d0cccf43b5b5125975712004deac3088 234 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 234 34.478 T 14-09-2016 IPR022877 Protein of unknown funcion UPF0173 AMK01_RS09370 d0cccf43b5b5125975712004deac3088 234 Gene3D G3DSA:3.60.15.10 1 222 7.7E-48 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS09370 d0cccf43b5b5125975712004deac3088 234 SUPERFAMILY SSF56281 1 222 5.9E-29 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS09370 d0cccf43b5b5125975712004deac3088 234 PANTHER PTHR15032 1 234 1.2E-43 T 14-09-2016 AMK01_RS12535 293b0cc72e137a40db1239405553631e 308 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12535 293b0cc72e137a40db1239405553631e 308 Gene3D G3DSA:3.40.50.300 2 226 8.7E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12535 293b0cc72e137a40db1239405553631e 308 PANTHER PTHR24220:SF305 6 236 1.2E-111 T 14-09-2016 AMK01_RS12535 293b0cc72e137a40db1239405553631e 308 Pfam PF00005 ABC transporter 21 163 3.7E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12535 293b0cc72e137a40db1239405553631e 308 SUPERFAMILY SSF52540 3 226 9.85E-62 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12535 293b0cc72e137a40db1239405553631e 308 SMART SM00382 30 214 1.4E-17 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12535 293b0cc72e137a40db1239405553631e 308 PANTHER PTHR24220 6 236 1.2E-111 T 14-09-2016 AMK01_RS13725 5065b563492b8bd19940566b062da6c7 265 Gene3D G3DSA:3.40.30.10 82 152 3.4E-4 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS13725 5065b563492b8bd19940566b062da6c7 265 SUPERFAMILY SSF52833 52 153 1.62E-9 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS13725 5065b563492b8bd19940566b062da6c7 265 Pfam PF05988 Bacterial protein of unknown function (DUF899) 7 262 4.5E-87 T 14-09-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like AMK01_RS04480 592d19a555567b56b5b703de52431d2f 286 PANTHER PTHR30341 5 286 8.8E-84 T 14-09-2016 AMK01_RS04480 592d19a555567b56b5b703de52431d2f 286 PANTHER PTHR30341:SF1 5 286 8.8E-84 T 14-09-2016 AMK01_RS04480 592d19a555567b56b5b703de52431d2f 286 SUPERFAMILY SSF52096 18 134 1.86E-33 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS04480 592d19a555567b56b5b703de52431d2f 286 SUPERFAMILY SSF52096 163 223 1.86E-33 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS04480 592d19a555567b56b5b703de52431d2f 286 Pfam PF01343 Peptidase family S49 87 229 1.3E-29 T 14-09-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK01_RS04480 592d19a555567b56b5b703de52431d2f 286 Gene3D G3DSA:3.90.226.10 19 130 1.5E-34 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS04480 592d19a555567b56b5b703de52431d2f 286 Gene3D G3DSA:3.90.226.10 198 235 1.5E-34 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS11925 651458fdd627c327caa2325909778f86 211 PIRSF PIRSF021719 4 207 7.7E-75 T 14-09-2016 IPR009412 Protein of unknown function DUF1062 AMK01_RS11925 651458fdd627c327caa2325909778f86 211 Pfam PF06353 Protein of unknown function (DUF1062) 40 172 4.1E-46 T 14-09-2016 IPR009412 Protein of unknown function DUF1062 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 PANTHER PTHR21071:SF4 7 314 1.4E-105 T 14-09-2016 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 SUPERFAMILY SSF56176 30 217 1.27E-37 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 207 305 2.6E-26 T 14-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 Gene3D G3DSA:3.90.78.10 235 307 2.7E-28 T 14-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 Gene3D G3DSA:3.30.465.10 102 234 7.4E-35 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 324 96.788 T 14-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 34 307 1.7E-48 T 14-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 Pfam PF01565 FAD binding domain 44 170 1.1E-13 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 SUPERFAMILY SSF56194 207 310 7.32E-37 T 14-09-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 Gene3D G3DSA:3.30.43.10 22 91 1.0E-17 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK01_RS14605 6f19ad371f66460353e945c9abeffab5 324 PANTHER PTHR21071 7 314 1.4E-105 T 14-09-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS27165 9bee30e9431666599cf3a9328e79f652 312 Pfam PF12705 PD-(D/E)XK nuclease superfamily 193 307 1.9E-6 T 14-09-2016 AMK01_RS27165 9bee30e9431666599cf3a9328e79f652 312 SUPERFAMILY SSF52540 5 178 5.31E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00100 c2673abe85e2d09ef4158e1be7031b4a 252 PANTHER PTHR30399 21 249 2.4E-58 T 14-09-2016 AMK01_RS00100 c2673abe85e2d09ef4158e1be7031b4a 252 Pfam PF01863 Protein of unknown function DUF45 41 242 6.0E-56 T 14-09-2016 IPR002725 Protein of unknown function DUF45 AMK01_RS00100 c2673abe85e2d09ef4158e1be7031b4a 252 PANTHER PTHR30399:SF3 21 249 2.4E-58 T 14-09-2016 AMK01_RS18575 29bc418a888c415be15d0730849b53dd 182 SUPERFAMILY SSF103025 68 181 7.06E-12 T 14-09-2016 AMK01_RS18575 29bc418a888c415be15d0730849b53dd 182 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 34 178 7.1E-49 T 14-09-2016 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AMK01_RS18575 29bc418a888c415be15d0730849b53dd 182 Pfam PF04268 Sarcosine oxidase, gamma subunit family 40 179 1.0E-44 T 14-09-2016 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 Gene3D G3DSA:3.90.180.10 5 178 5.9E-60 T 14-09-2016 IPR011032 GroES-like AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 Gene3D G3DSA:3.40.50.720 179 291 6.8E-17 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 143 6.4E-23 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 PANTHER PTHR11695:SF587 16 344 2.3E-166 T 14-09-2016 AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 PANTHER PTHR11695 16 344 2.3E-166 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 SMART SM00829 8 341 7.3E-4 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 SUPERFAMILY SSF51735 148 311 1.72E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 SUPERFAMILY SSF50129 9 171 3.2E-47 T 14-09-2016 IPR011032 GroES-like AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK01_RS14160 fcc779a29b4e380e6de140fe42251f5b 348 Pfam PF00107 Zinc-binding dehydrogenase 185 306 5.0E-18 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS06065 697a3000e23a16a496d97641a84d3500 259 SUPERFAMILY SSF54593 141 258 1.88E-21 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06065 697a3000e23a16a496d97641a84d3500 259 Gene3D G3DSA:3.10.180.10 143 258 1.0E-27 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06065 697a3000e23a16a496d97641a84d3500 259 Gene3D G3DSA:3.10.180.10 8 126 1.0E-33 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06065 697a3000e23a16a496d97641a84d3500 259 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 252 1.2E-4 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS06065 697a3000e23a16a496d97641a84d3500 259 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 121 6.9E-6 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS06065 697a3000e23a16a496d97641a84d3500 259 SUPERFAMILY SSF54593 7 125 2.2E-22 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06065 697a3000e23a16a496d97641a84d3500 259 PANTHER PTHR33993:SF2 4 259 8.5E-62 T 14-09-2016 AMK01_RS06065 697a3000e23a16a496d97641a84d3500 259 PANTHER PTHR33993 4 259 8.5E-62 T 14-09-2016 AMK01_RS17885 7f529df1b684c822535fa41876b58b83 239 PANTHER PTHR30625 12 230 2.6E-66 T 14-09-2016 AMK01_RS17885 7f529df1b684c822535fa41876b58b83 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 214 7.6E-38 T 14-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AMK01_RS17885 7f529df1b684c822535fa41876b58b83 239 TIGRFAM TIGR02796 tolQ: protein TolQ 14 226 6.0E-86 T 14-09-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AMK01_RS17885 7f529df1b684c822535fa41876b58b83 239 PANTHER PTHR30625:SF3 12 230 2.6E-66 T 14-09-2016 AMK01_RS10065 f2879c5a0097ee23c01cb1ff6abb4971 249 PANTHER PTHR31272 5 240 4.2E-77 T 14-09-2016 AMK01_RS10065 f2879c5a0097ee23c01cb1ff6abb4971 249 PANTHER PTHR31272:SF4 5 240 4.2E-77 T 14-09-2016 AMK01_RS10065 f2879c5a0097ee23c01cb1ff6abb4971 249 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 12 227 1.7E-57 T 14-09-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMK01_RS11595 0925253c008cc781af2bc1b65e85b1d0 437 Pfam PF01551 Peptidase family M23 329 422 7.8E-32 T 14-09-2016 IPR016047 Peptidase M23 AMK01_RS11595 0925253c008cc781af2bc1b65e85b1d0 437 SUPERFAMILY SSF51261 296 425 2.46E-51 T 14-09-2016 IPR011055 Duplicated hybrid motif AMK01_RS11595 0925253c008cc781af2bc1b65e85b1d0 437 PANTHER PTHR21666 289 428 1.1E-46 T 14-09-2016 AMK01_RS11595 0925253c008cc781af2bc1b65e85b1d0 437 Gene3D G3DSA:2.70.70.10 293 427 1.0E-46 T 14-09-2016 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 PANTHER PTHR11638:SF111 4 140 0.0 T 14-09-2016 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 PANTHER PTHR11638:SF111 164 750 0.0 T 14-09-2016 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 PANTHER PTHR11638 164 750 0.0 T 14-09-2016 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 226 357 1.8E-12 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Gene3D G3DSA:3.40.50.300 184 365 1.2E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 SMART SM01086 668 760 2.4E-34 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 317 329 - T 14-09-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 PANTHER PTHR11638 4 140 0.0 T 14-09-2016 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Pfam PF07724 AAA domain (Cdc48 subfamily) 501 662 2.2E-46 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 5 749 0.0 T 14-09-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 SUPERFAMILY SSF81923 4 143 4.32E-56 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 SUPERFAMILY SSF52540 182 431 1.66E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Gene3D G3DSA:1.10.1780.10 4 144 5.1E-40 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Gene3D G3DSA:3.40.50.300 457 680 2.0E-54 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 610 624 1.1E-36 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 506 524 1.1E-36 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 577 595 1.1E-36 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 1.1E-36 T 14-09-2016 IPR001270 ClpA/B family GO:0005524 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 63 9.6E-12 T 14-09-2016 IPR004176 Clp, N-terminal GO:0019538 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Gene3D G3DSA:1.10.8.60 367 450 2.2E-27 T 14-09-2016 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 533 551 - T 14-09-2016 IPR028299 ClpA/B, conserved site 2 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 670 748 3.7E-24 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 SUPERFAMILY SSF52540 452 742 2.03E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 Gene3D G3DSA:1.10.8.60 681 754 5.8E-28 T 14-09-2016 AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 SMART SM00382 502 665 3.2E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS09645 dd952a6c02b431ba131db299b6f120b7 829 SMART SM00382 221 365 1.2E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 PANTHER PTHR11751 76 462 1.7E-64 T 14-09-2016 AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 SUPERFAMILY SSF53383 72 457 4.35E-68 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 4.9E-15 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 Pfam PF00155 Aminotransferase class I and II 102 348 6.2E-14 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 Gene3D G3DSA:1.10.10.10 10 79 3.0E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 SUPERFAMILY SSF46785 11 82 8.38E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 Gene3D G3DSA:3.40.640.10 135 353 2.0E-52 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 PANTHER PTHR11751:SF407 76 462 1.7E-64 T 14-09-2016 AMK01_RS06510 aa4a02a273965fa0c640881f992a7e8c 467 SMART SM00345 19 78 9.4E-17 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 Gene3D G3DSA:3.30.860.10 1 91 1.2E-40 T 14-09-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-09-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 PANTHER PTHR11880 1 92 5.5E-48 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 PIRSF PIRSF002144 1 92 9.6E-32 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.3E-41 T 14-09-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.181 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.8E-20 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.8E-20 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.8E-20 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 SUPERFAMILY SSF54570 3 84 9.68E-34 T 14-09-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AMK01_RS08470 a1c14ed9499bda2f8317e513b8fb8e49 92 Pfam PF00203 Ribosomal protein S19 3 83 2.6E-35 T 14-09-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 Gene3D G3DSA:3.40.190.10 177 263 1.7E-19 T 14-09-2016 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-17 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 Pfam PF03466 LysR substrate binding domain 89 295 4.7E-39 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 SUPERFAMILY SSF46785 2 112 4.19E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 SUPERFAMILY SSF53850 90 300 4.69E-38 T 14-09-2016 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 PANTHER PTHR30126 1 309 7.5E-62 T 14-09-2016 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.4E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.4E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.4E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 Gene3D G3DSA:3.40.190.10 90 176 3.0E-16 T 14-09-2016 AMK01_RS10470 1dee521008a541269ff1402d5abd4f4e 315 Gene3D G3DSA:1.10.10.10 4 87 1.6E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14815 24ad6d34f4986bf314d0d369a8776b35 455 SUPERFAMILY SSF54368 6 114 1.15E-18 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS14815 24ad6d34f4986bf314d0d369a8776b35 455 Gene3D G3DSA:3.30.590.10 120 441 2.3E-97 T 14-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK01_RS14815 24ad6d34f4986bf314d0d369a8776b35 455 PANTHER PTHR20852 6 455 4.2E-156 T 14-09-2016 AMK01_RS14815 24ad6d34f4986bf314d0d369a8776b35 455 SMART SM01230 117 372 4.4E-98 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS14815 24ad6d34f4986bf314d0d369a8776b35 455 PANTHER PTHR20852:SF35 6 455 4.2E-156 T 14-09-2016 AMK01_RS14815 24ad6d34f4986bf314d0d369a8776b35 455 SUPERFAMILY SSF55931 118 453 1.47E-103 T 14-09-2016 AMK01_RS14815 24ad6d34f4986bf314d0d369a8776b35 455 Pfam PF00120 Glutamine synthetase, catalytic domain 118 449 9.4E-107 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS14815 24ad6d34f4986bf314d0d369a8776b35 455 Gene3D G3DSA:3.10.20.70 7 119 2.0E-9 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 Pfam PF07690 Major Facilitator Superfamily 6 392 1.6E-45 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 PANTHER PTHR23501 1 437 3.3E-95 T 14-09-2016 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 Gene3D G3DSA:1.20.1250.20 3 171 1.7E-20 T 14-09-2016 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 Gene3D G3DSA:1.20.1250.20 248 426 9.3E-19 T 14-09-2016 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 SUPERFAMILY SSF103473 231 427 1.27E-55 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 SUPERFAMILY SSF103473 2 184 1.27E-55 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 5 29 1.8E-9 T 14-09-2016 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 126 150 1.8E-9 T 14-09-2016 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 285 309 1.8E-9 T 14-09-2016 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 96 116 1.8E-9 T 14-09-2016 AMK01_RS04995 784747510191b81863e4825f4471bcdc 441 PANTHER PTHR23501:SF5 1 437 3.3E-95 T 14-09-2016 AMK01_RS19565 856877c748223e9b057ca9debb6a2b00 265 PANTHER PTHR10434 1 242 5.4E-40 T 14-09-2016 AMK01_RS19565 856877c748223e9b057ca9debb6a2b00 265 Pfam PF01553 Acyltransferase 59 183 6.7E-20 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK01_RS19565 856877c748223e9b057ca9debb6a2b00 265 SUPERFAMILY SSF69593 14 212 7.06E-36 T 14-09-2016 AMK01_RS19565 856877c748223e9b057ca9debb6a2b00 265 SMART SM00563 72 186 3.6E-25 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK01_RS19565 856877c748223e9b057ca9debb6a2b00 265 Gene3D G3DSA:3.40.1130.10 38 191 7.8E-13 T 14-09-2016 AMK01_RS16950 9460a5900b93ffb70020df66fe05e6ef 323 PANTHER PTHR31528 1 307 1.6E-44 T 14-09-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 AMK01_RS16950 9460a5900b93ffb70020df66fe05e6ef 323 SUPERFAMILY SSF53850 25 255 1.85E-30 T 14-09-2016 AMK01_RS16950 9460a5900b93ffb70020df66fe05e6ef 323 Pfam PF09084 NMT1/THI5 like 37 254 5.7E-40 T 14-09-2016 IPR015168 SsuA/THI5-like AMK01_RS16950 9460a5900b93ffb70020df66fe05e6ef 323 Gene3D G3DSA:3.40.190.10 32 120 4.2E-5 T 14-09-2016 AMK01_RS16950 9460a5900b93ffb70020df66fe05e6ef 323 Gene3D G3DSA:3.40.190.10 121 207 1.4E-4 T 14-09-2016 AMK01_RS04030 2583f27e3694a65133ca890a174c317a 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 239 1.2E-75 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS04030 2583f27e3694a65133ca890a174c317a 316 Gene3D G3DSA:3.40.50.720 7 208 2.1E-69 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04030 2583f27e3694a65133ca890a174c317a 316 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 6 307 49.036 T 14-09-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 AMK01_RS04030 2583f27e3694a65133ca890a174c317a 316 PANTHER PTHR10366 8 307 5.3E-142 T 14-09-2016 AMK01_RS04030 2583f27e3694a65133ca890a174c317a 316 Gene3D G3DSA:3.90.25.10 286 309 2.9E-12 T 14-09-2016 AMK01_RS04030 2583f27e3694a65133ca890a174c317a 316 Gene3D G3DSA:3.90.25.10 209 233 2.9E-12 T 14-09-2016 AMK01_RS04030 2583f27e3694a65133ca890a174c317a 316 PANTHER PTHR10366:SF246 8 307 5.3E-142 T 14-09-2016 AMK01_RS04030 2583f27e3694a65133ca890a174c317a 316 SUPERFAMILY SSF51735 4 311 5.52E-81 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 PANTHER PTHR30348 262 289 4.8E-116 T 14-09-2016 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 PANTHER PTHR30348 162 243 4.8E-116 T 14-09-2016 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 Pfam PF01904 Protein of unknown function DUF72 24 287 6.6E-66 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 PANTHER PTHR30348:SF7 2 137 4.8E-116 T 14-09-2016 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 PANTHER PTHR30348:SF7 262 289 4.8E-116 T 14-09-2016 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 PANTHER PTHR30348 2 137 4.8E-116 T 14-09-2016 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 PANTHER PTHR30348:SF7 162 243 4.8E-116 T 14-09-2016 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 Gene3D G3DSA:3.20.20.410 2 289 1.2E-87 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 SUPERFAMILY SSF117396 162 289 4.05E-77 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS01770 52fcc81d7ca961276e3fa4eaabf4fa42 301 SUPERFAMILY SSF117396 7 135 4.05E-77 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS16005 8bfe8209865d7427f4f82cb6a9e44f7c 235 PIRSF PIRSF033328 1 235 1.6E-108 T 14-09-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS16005 8bfe8209865d7427f4f82cb6a9e44f7c 235 Pfam PF06299 Protein of unknown function (DUF1045) 62 219 1.5E-57 T 14-09-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS19685 b95d2a97128032aeee2dfd8c7625d7bb 410 Pfam PF03734 L,D-transpeptidase catalytic domain 101 176 1.4E-5 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS19685 b95d2a97128032aeee2dfd8c7625d7bb 410 SUPERFAMILY SSF141523 58 176 2.35E-7 T 14-09-2016 AMK01_RS19685 b95d2a97128032aeee2dfd8c7625d7bb 410 PANTHER PTHR36699 1 308 4.1E-54 T 14-09-2016 AMK01_RS04605 10994be0ed5b896edac2fc2f06917a3e 331 SUPERFAMILY SSF143865 5 264 1.31E-34 T 14-09-2016 AMK01_RS04605 10994be0ed5b896edac2fc2f06917a3e 331 Pfam PF01544 CorA-like Mg2+ transporter protein 41 327 2.6E-57 T 14-09-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMK01_RS04605 10994be0ed5b896edac2fc2f06917a3e 331 SUPERFAMILY SSF144083 266 328 4.84E-15 T 14-09-2016 AMK01_RS04605 10994be0ed5b896edac2fc2f06917a3e 331 PANTHER PTHR21535 108 327 4.1E-19 T 14-09-2016 AMK01_RS04605 10994be0ed5b896edac2fc2f06917a3e 331 Gene3D G3DSA:1.20.58.340 162 242 7.9E-4 T 14-09-2016 AMK01_RS04605 10994be0ed5b896edac2fc2f06917a3e 331 Gene3D G3DSA:1.20.58.340 258 329 6.4E-18 T 14-09-2016 AMK01_RS03295 ab57d7ede2c287cfb5d86550859f09ee 144 Gene3D G3DSA:3.30.300.20 41 139 4.2E-18 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS03295 ab57d7ede2c287cfb5d86550859f09ee 144 SUPERFAMILY SSF82784 20 138 3.93E-23 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS03295 ab57d7ede2c287cfb5d86550859f09ee 144 Pfam PF02566 OsmC-like protein 43 138 6.4E-17 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 Gene3D G3DSA:3.10.350.10 296 341 5.7E-16 T 14-09-2016 IPR018392 LysM domain AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 Pfam PF01476 LysM domain 184 226 6.4E-6 T 14-09-2016 IPR018392 LysM domain AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 Pfam PF01476 LysM domain 298 340 6.4E-12 T 14-09-2016 IPR018392 LysM domain AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 Pfam PF01551 Peptidase family M23 430 524 8.0E-27 T 14-09-2016 IPR016047 Peptidase M23 AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 SUPERFAMILY SSF51261 318 528 1.88E-42 T 14-09-2016 IPR011055 Duplicated hybrid motif AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 Gene3D G3DSA:2.70.70.10 387 529 2.9E-38 T 14-09-2016 AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 PANTHER PTHR21666 376 528 1.2E-34 T 14-09-2016 AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 SMART SM00257 182 226 2.9E-4 T 14-09-2016 IPR018392 LysM domain AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 SMART SM00257 297 340 6.9E-14 T 14-09-2016 IPR018392 LysM domain AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 Gene3D G3DSA:3.10.350.10 185 227 7.7E-8 T 14-09-2016 IPR018392 LysM domain AMK01_RS09245 f718e84c9a5c1f3942f501158a8860fd 529 SUPERFAMILY SSF54106 184 226 5.89E-5 T 14-09-2016 IPR018392 LysM domain AMK01_RS00795 5cc4ef685ea31d67c6e713ebccd9bf08 319 Pfam PF00293 NUDIX domain 182 293 9.7E-17 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS00795 5cc4ef685ea31d67c6e713ebccd9bf08 319 Gene3D G3DSA:3.90.79.10 142 316 1.5E-49 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS00795 5cc4ef685ea31d67c6e713ebccd9bf08 319 ProSitePatterns PS00893 Nudix box signature. 214 235 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK01_RS00795 5cc4ef685ea31d67c6e713ebccd9bf08 319 SUPERFAMILY SSF55811 134 315 1.22E-42 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS00795 5cc4ef685ea31d67c6e713ebccd9bf08 319 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 147 177 3.0E-12 T 14-09-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AMK01_RS00795 5cc4ef685ea31d67c6e713ebccd9bf08 319 PANTHER PTHR22769 138 316 1.4E-75 T 14-09-2016 AMK01_RS00795 5cc4ef685ea31d67c6e713ebccd9bf08 319 PANTHER PTHR22769:SF7 138 316 1.4E-75 T 14-09-2016 AMK01_RS00795 5cc4ef685ea31d67c6e713ebccd9bf08 319 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 47 144 5.7E-8 T 14-09-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AMK01_RS12730 8061be902fa66814b3e7cd6718d83749 211 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 37 211 1.3E-65 T 14-09-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS12730 8061be902fa66814b3e7cd6718d83749 211 PANTHER PTHR30069 16 211 4.7E-57 T 14-09-2016 AMK01_RS12730 8061be902fa66814b3e7cd6718d83749 211 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 39 211 1.6E-59 T 14-09-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS12730 8061be902fa66814b3e7cd6718d83749 211 Gene3D G3DSA:3.40.50.300 13 211 1.1E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12730 8061be902fa66814b3e7cd6718d83749 211 PIRSF PIRSF015617 12 211 1.3E-71 T 14-09-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS12730 8061be902fa66814b3e7cd6718d83749 211 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 13 32 1.6E-5 T 14-09-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS12730 8061be902fa66814b3e7cd6718d83749 211 SUPERFAMILY SSF52540 19 211 2.76E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15485 690bd21a6758a676727db7a550436862 426 PIRSF PIRSF038885 5 414 1.4E-195 T 14-09-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 AMK01_RS15485 690bd21a6758a676727db7a550436862 426 SUPERFAMILY SSF81342 21 277 5.18E-102 T 14-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMK01_RS15485 690bd21a6758a676727db7a550436862 426 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 275 383 5.1E-44 T 14-09-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 AMK01_RS15485 690bd21a6758a676727db7a550436862 426 SUPERFAMILY SSF81648 278 404 2.62E-42 T 14-09-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 AMK01_RS15485 690bd21a6758a676727db7a550436862 426 PANTHER PTHR19271 11 425 2.1E-209 T 14-09-2016 AMK01_RS15485 690bd21a6758a676727db7a550436862 426 PANTHER PTHR19271:SF9 11 425 2.1E-209 T 14-09-2016 AMK01_RS15485 690bd21a6758a676727db7a550436862 426 Pfam PF00033 Cytochrome b/b6/petB 32 219 7.2E-72 T 14-09-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 AMK01_RS15485 690bd21a6758a676727db7a550436862 426 Gene3D G3DSA:1.20.810.10 15 401 4.0E-168 T 14-09-2016 IPR027387 Cytochrome b/b6-like domain AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 SUPERFAMILY SSF53955 173 379 1.04E-68 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 Pfam PF00912 Transglycosylase 192 357 5.7E-61 T 14-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 Gene3D G3DSA:1.10.3810.10 192 358 1.2E-66 T 14-09-2016 AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 Pfam PF00905 Penicillin binding protein transpeptidase domain 445 684 1.9E-21 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 PANTHER PTHR32282:SF5 110 710 2.0E-172 T 14-09-2016 AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 194 710 3.3E-174 T 14-09-2016 AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 Pfam PF07886 BA14K-like protein 736 764 1.9E-10 T 14-09-2016 IPR012413 BA14k family GO:0009405 AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 PANTHER PTHR32282 110 710 2.0E-172 T 14-09-2016 AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 Gene3D G3DSA:3.40.710.10 359 714 3.6E-98 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 SUPERFAMILY SSF56601 388 713 2.29E-97 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS05785 540142a0e8d69a015be99ed3407bf5f8 765 SUPERFAMILY SSF56601 338 360 2.29E-97 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS12560 f049b87157f8a804d70eb4113617be5b 253 Pfam PF01261 Xylose isomerase-like TIM barrel 24 211 1.4E-15 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS12560 f049b87157f8a804d70eb4113617be5b 253 PANTHER PTHR40117 1 240 3.4E-23 T 14-09-2016 AMK01_RS12560 f049b87157f8a804d70eb4113617be5b 253 SUPERFAMILY SSF51658 13 235 2.28E-34 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS12560 f049b87157f8a804d70eb4113617be5b 253 Gene3D G3DSA:3.20.20.150 2 251 1.2E-44 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PANTHER PTHR24322:SF463 9 132 2.0E-45 T 14-09-2016 AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 Pfam PF00106 short chain dehydrogenase 6 191 1.6E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.6E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.6E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.6E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.6E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PANTHER PTHR24322:SF463 148 180 2.0E-45 T 14-09-2016 AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 SUPERFAMILY SSF51735 4 210 9.94E-56 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 Gene3D G3DSA:3.40.50.720 4 250 1.5E-58 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.6E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.6E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.6E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PANTHER PTHR24322 9 132 2.0E-45 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19475 b9e08aeeff3d6b8e1071782d4f4f677a 277 PANTHER PTHR24322 148 180 2.0E-45 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS13035 53534f6f5c451ab3114e148192af592b 346 Pfam PF11294 Protein of unknown function (DUF3095) 14 239 9.4E-74 T 14-09-2016 IPR021445 Protein of unknown function DUF3095 AMK01_RS13035 53534f6f5c451ab3114e148192af592b 346 Pfam PF11294 Protein of unknown function (DUF3095) 246 333 6.0E-31 T 14-09-2016 IPR021445 Protein of unknown function DUF3095 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 SMART SM00271 4 62 1.3E-30 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 PRINTS PR00625 DnaJ domain signature 25 40 1.1E-31 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 PRINTS PR00625 DnaJ domain signature 42 62 1.1E-31 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 PRINTS PR00625 DnaJ domain signature 62 81 1.1E-31 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 PRINTS PR00625 DnaJ domain signature 7 25 1.1E-31 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 SUPERFAMILY SSF49493 188 264 1.57E-20 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 SUPERFAMILY SSF49493 116 140 1.57E-20 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Gene3D G3DSA:2.10.230.10 143 212 6.5E-24 T 14-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-09-2016 IPR018253 DnaJ domain, conserved site AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 SUPERFAMILY SSF46565 1 106 3.14E-35 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 PANTHER PTHR24078:SF231 1 362 9.3E-160 T 14-09-2016 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Pfam PF01556 DnaJ C terminal domain 123 336 7.0E-44 T 14-09-2016 IPR002939 Chaperone DnaJ, C-terminal AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 41.593 T 14-09-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 PANTHER PTHR24078 1 362 9.3E-160 T 14-09-2016 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 SUPERFAMILY SSF57938 136 213 3.92E-22 T 14-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Gene3D G3DSA:2.60.260.20 258 337 2.2E-23 T 14-09-2016 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Gene3D G3DSA:2.60.260.20 98 142 1.9E-24 T 14-09-2016 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Gene3D G3DSA:2.60.260.20 213 256 1.9E-24 T 14-09-2016 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Pfam PF00684 DnaJ central domain 149 209 3.5E-14 T 14-09-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Gene3D G3DSA:1.10.287.110 1 97 8.4E-37 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 SUPERFAMILY SSF49493 261 347 3.53E-23 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 Pfam PF00226 DnaJ domain 5 67 1.5E-27 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS00875 bdb6676e7b5c4bad713755d3fa2929a0 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 9.8E-134 T 14-09-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 213 250 - T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 Gene3D G3DSA:3.40.640.10 50 279 6.3E-88 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 9 386 1.2E-137 T 14-09-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 4 388 45.012 T 14-09-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 PANTHER PTHR11986 11 395 5.7E-172 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 Pfam PF00202 Aminotransferase class-III 15 386 3.1E-119 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 SUPERFAMILY SSF53383 8 387 1.06E-123 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 PANTHER PTHR11986:SF79 11 395 5.7E-172 T 14-09-2016 AMK01_RS02750 53de3fec840e8fd8921d5ff7c5603458 399 Gene3D G3DSA:3.90.1150.10 280 388 6.0E-32 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS12475 436efac91b589ad6a1e83a60fdb549e9 185 PANTHER PTHR12302 44 169 3.3E-22 T 14-09-2016 AMK01_RS12475 436efac91b589ad6a1e83a60fdb549e9 185 Gene3D G3DSA:2.40.50.90 41 130 1.5E-15 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS12475 436efac91b589ad6a1e83a60fdb549e9 185 Pfam PF00565 Staphylococcal nuclease homologue 54 152 2.5E-11 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS12475 436efac91b589ad6a1e83a60fdb549e9 185 SUPERFAMILY SSF50199 34 158 2.75E-26 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS12475 436efac91b589ad6a1e83a60fdb549e9 185 SMART SM00318 38 153 8.8E-7 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS12475 436efac91b589ad6a1e83a60fdb549e9 185 PANTHER PTHR12302:SF0 44 169 3.3E-22 T 14-09-2016 AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 Gene3D G3DSA:1.10.10.60 13 76 6.0E-22 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 3.0E-15 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 SUPERFAMILY SSF48498 93 205 9.85E-22 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 Gene3D G3DSA:1.10.357.10 82 205 3.2E-21 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 2.2E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 2.2E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 SUPERFAMILY SSF46689 13 96 3.03E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 68 - T 14-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 PANTHER PTHR30055:SF79 9 206 5.5E-52 T 14-09-2016 AMK01_RS14190 ab91c5ba0a8d4824ce1957ba3fbb3a13 207 PANTHER PTHR30055 9 206 5.5E-52 T 14-09-2016 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 Gene3D G3DSA:3.90.1170.30 335 427 2.2E-29 T 14-09-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 1.8E-20 T 14-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 PANTHER PTHR10515 1 435 2.3E-178 T 14-09-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 SUPERFAMILY SSF47648 3 69 9.94E-20 T 14-09-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 Gene3D G3DSA:1.20.970.10 1 67 4.2E-25 T 14-09-2016 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 347 420 4.0E-19 T 14-09-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 1 434 2.8E-208 T 14-09-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 420 3.2E-160 T 14-09-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 Pfam PF00591 Glycosyl transferase family, a/b domain 77 306 1.3E-41 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 SMART SM00941 347 421 2.2E-24 T 14-09-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 SUPERFAMILY SSF52418 70 330 3.4E-88 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 PIRSF PIRSF000478 1 434 1.4E-150 T 14-09-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 PANTHER PTHR10515:SF0 1 435 2.3E-178 T 14-09-2016 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 Gene3D G3DSA:3.40.1030.10 70 334 1.9E-108 T 14-09-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 SUPERFAMILY SSF54680 334 434 5.23E-25 T 14-09-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK01_RS01125 46ce9f5c633c90a9203d1eb2946dee2f 435 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 14-09-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 AMK01_RS13920 ac0f1c3d59a766ee9ed65594e1e8fef9 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 121 9.6E-6 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS13920 ac0f1c3d59a766ee9ed65594e1e8fef9 127 SUPERFAMILY SSF54593 8 125 1.1E-22 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS13920 ac0f1c3d59a766ee9ed65594e1e8fef9 127 Gene3D G3DSA:3.10.180.10 9 125 6.4E-21 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 PANTHER PTHR22777:SF17 199 353 1.2E-76 T 14-09-2016 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 Pfam PF03471 Transporter associated domain 269 350 1.4E-18 T 14-09-2016 IPR005170 Transporter-associated domain AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 Gene3D G3DSA:3.10.580.10 190 262 6.2E-15 T 14-09-2016 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 Gene3D G3DSA:3.10.580.10 76 153 6.2E-15 T 14-09-2016 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 PANTHER PTHR22777:SF17 54 157 1.2E-76 T 14-09-2016 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 Gene3D G3DSA:3.30.465.10 263 350 6.0E-23 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 SMART SM01091 268 351 7.9E-24 T 14-09-2016 IPR005170 Transporter-associated domain AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 PANTHER PTHR22777 199 353 1.2E-76 T 14-09-2016 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 SUPERFAMILY SSF56176 268 352 4.36E-18 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 SUPERFAMILY SSF54631 189 268 3.05E-28 T 14-09-2016 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 SUPERFAMILY SSF54631 85 149 3.05E-28 T 14-09-2016 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 PANTHER PTHR22777 54 157 1.2E-76 T 14-09-2016 AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 Pfam PF00571 CBS domain 90 148 9.7E-6 T 14-09-2016 IPR000644 CBS domain AMK01_RS02060 b0613eeed247a2ae638cb85130d5339f 381 Pfam PF00571 CBS domain 204 250 0.0055 T 14-09-2016 IPR000644 CBS domain AMK01_RS19225 15520a574acbb13f8b4db05950f6bee8 319 SUPERFAMILY SSF46689 275 318 6.87E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS19225 15520a574acbb13f8b4db05950f6bee8 319 SUPERFAMILY SSF55781 62 205 3.06E-13 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS19225 15520a574acbb13f8b4db05950f6bee8 319 Gene3D G3DSA:3.30.450.40 155 205 1.8E-6 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS19225 15520a574acbb13f8b4db05950f6bee8 319 Gene3D G3DSA:1.10.10.60 267 318 2.1E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS19225 15520a574acbb13f8b4db05950f6bee8 319 Pfam PF02954 Bacterial regulatory protein, Fis family 278 316 6.9E-13 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS19225 15520a574acbb13f8b4db05950f6bee8 319 Pfam PF01590 GAF domain 74 201 1.5E-5 T 14-09-2016 IPR003018 GAF domain GO:0005515 AMK01_RS19225 15520a574acbb13f8b4db05950f6bee8 319 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 299 319 3.2E-11 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS19225 15520a574acbb13f8b4db05950f6bee8 319 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 282 299 3.2E-11 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS04020 964a2357a7a4badc77e7fc1a001d6a4b 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 5.3E-96 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04020 964a2357a7a4badc77e7fc1a001d6a4b 351 SUPERFAMILY SSF51735 2 334 2.16E-86 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04020 964a2357a7a4badc77e7fc1a001d6a4b 351 Gene3D G3DSA:3.90.25.10 191 347 9.0E-56 T 14-09-2016 AMK01_RS04020 964a2357a7a4badc77e7fc1a001d6a4b 351 PANTHER PTHR10366:SF41 1 350 5.9E-165 T 14-09-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AMK01_RS04020 964a2357a7a4badc77e7fc1a001d6a4b 351 Gene3D G3DSA:3.40.50.720 2 190 7.6E-60 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04020 964a2357a7a4badc77e7fc1a001d6a4b 351 PANTHER PTHR10366 1 350 5.9E-165 T 14-09-2016 AMK01_RS04020 964a2357a7a4badc77e7fc1a001d6a4b 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 9.7E-151 T 14-09-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 Gene3D G3DSA:1.10.486.10 408 535 9.1E-10 T 14-09-2016 AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 PANTHER PTHR11070 1 644 3.4E-276 T 14-09-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 Pfam PF13361 UvrD-like helicase C-terminal domain 558 615 1.0E-16 T 14-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 Pfam PF13361 UvrD-like helicase C-terminal domain 297 444 3.2E-22 T 14-09-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 Gene3D G3DSA:3.40.50.300 557 630 1.2E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 Gene3D G3DSA:3.40.50.300 300 407 1.2E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 SUPERFAMILY SSF52540 3 628 6.05E-127 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 Pfam PF00580 UvrD/REP helicase N-terminal domain 24 287 3.1E-55 T 14-09-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 Gene3D G3DSA:3.40.50.300 4 290 1.1E-69 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03035 4e7326430183cc792e1d2ec5e394a3d4 686 PANTHER PTHR11070:SF3 1 644 3.4E-276 T 14-09-2016 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 Gene3D G3DSA:3.30.450.20 73 176 5.0E-6 T 14-09-2016 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 1.1E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 388 1.1E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 406 1.1E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 Gene3D G3DSA:3.30.565.10 238 406 4.8E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 72 406 6.6E-107 T 14-09-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 PANTHER PTHR24423 68 406 2.5E-85 T 14-09-2016 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 SMART SM00388 184 251 1.3E-20 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 SMART SM00387 297 406 7.5E-26 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 SUPERFAMILY SSF55785 83 182 1.8E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 Pfam PF00512 His Kinase A (phospho-acceptor) domain 184 249 4.6E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 297 405 2.2E-20 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 SUPERFAMILY SSF47384 172 249 5.3E-20 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 Gene3D G3DSA:1.10.287.130 177 237 2.4E-20 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 PANTHER PTHR24423:SF554 68 406 2.5E-85 T 14-09-2016 AMK01_RS02710 0ada0298ed61fae701d906f9249ebe85 406 SUPERFAMILY SSF55874 240 406 5.76E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS09500 055ff39a7ec7288f870ee5bcd6ce526d 405 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 14-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK01_RS09500 055ff39a7ec7288f870ee5bcd6ce526d 405 PANTHER PTHR11751:SF302 12 397 7.3E-209 T 14-09-2016 AMK01_RS09500 055ff39a7ec7288f870ee5bcd6ce526d 405 PANTHER PTHR11751 12 397 7.3E-209 T 14-09-2016 AMK01_RS09500 055ff39a7ec7288f870ee5bcd6ce526d 405 Gene3D G3DSA:3.40.640.10 44 257 2.5E-62 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS09500 055ff39a7ec7288f870ee5bcd6ce526d 405 Gene3D G3DSA:3.90.1150.10 258 389 5.0E-42 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS09500 055ff39a7ec7288f870ee5bcd6ce526d 405 Pfam PF00155 Aminotransferase class I and II 31 382 2.7E-51 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS09500 055ff39a7ec7288f870ee5bcd6ce526d 405 SUPERFAMILY SSF53383 3 388 7.56E-108 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PANTHER PTHR11817:SF3 3 478 4.9E-187 T 14-09-2016 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 SUPERFAMILY SSF52935 321 471 6.15E-39 T 14-09-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 Gene3D G3DSA:2.40.33.10 76 165 9.0E-28 T 14-09-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 SUPERFAMILY SSF51621 168 340 1.15E-88 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 SUPERFAMILY SSF51621 3 78 1.15E-88 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 1.2E-145 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 Pfam PF00224 Pyruvate kinase, barrel domain 5 335 4.1E-108 T 14-09-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 Gene3D G3DSA:3.20.20.60 169 323 1.4E-92 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 Gene3D G3DSA:3.20.20.60 5 75 1.4E-92 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PRINTS PR01050 Pyruvate kinase family signature 242 266 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PRINTS PR01050 Pyruvate kinase family signature 188 202 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PRINTS PR01050 Pyruvate kinase family signature 267 291 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PRINTS PR01050 Pyruvate kinase family signature 311 327 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PRINTS PR01050 Pyruvate kinase family signature 62 78 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PRINTS PR01050 Pyruvate kinase family signature 215 241 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PRINTS PR01050 Pyruvate kinase family signature 292 310 3.5E-65 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 5.3E-32 T 14-09-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 PANTHER PTHR11817 3 478 4.9E-187 T 14-09-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 SUPERFAMILY SSF50800 73 166 3.14E-25 T 14-09-2016 IPR011037 Pyruvate kinase-like, insert domain AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 14-09-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18280 9ebebb1f24bb7606b895a0e718732488 479 Gene3D G3DSA:3.40.1380.20 324 468 2.9E-43 T 14-09-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 PANTHER PTHR30537:SF29 1 294 5.4E-82 T 14-09-2016 AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 Gene3D G3DSA:3.40.190.10 109 179 1.2E-13 T 14-09-2016 AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 SUPERFAMILY SSF53850 89 296 5.43E-37 T 14-09-2016 AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 SUPERFAMILY SSF46785 3 86 7.82E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.3E-14 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 Gene3D G3DSA:3.40.190.10 180 263 1.8E-8 T 14-09-2016 AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 PANTHER PTHR30537 1 294 5.4E-82 T 14-09-2016 AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 Gene3D G3DSA:1.10.10.10 2 81 1.1E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12455 917a0ac15b9087e4f45351d3421b50a3 298 Pfam PF03466 LysR substrate binding domain 88 294 3.1E-35 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS16295 ad8a572dc2d5b256afc35e605e596551 256 PANTHER PTHR35811:SF1 1 242 1.5E-63 T 14-09-2016 AMK01_RS16295 ad8a572dc2d5b256afc35e605e596551 256 Pfam PF01936 NYN domain 9 141 5.3E-30 T 14-09-2016 IPR021139 NYN domain, limkain-b1-type AMK01_RS16295 ad8a572dc2d5b256afc35e605e596551 256 Gene3D G3DSA:3.40.50.1010 4 143 6.4E-28 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS16295 ad8a572dc2d5b256afc35e605e596551 256 PANTHER PTHR35811 1 242 1.5E-63 T 14-09-2016 AMK01_RS16295 ad8a572dc2d5b256afc35e605e596551 256 Pfam PF12872 OST-HTH/LOTUS domain 183 244 3.9E-13 T 14-09-2016 IPR025605 OST-HTH/LOTUS domain AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 Pfam PF00120 Glutamine synthetase, catalytic domain 104 331 7.7E-17 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 SUPERFAMILY SSF55931 100 332 5.0E-57 T 14-09-2016 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 PANTHER PTHR20852:SF14 1 333 1.4E-159 T 14-09-2016 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 ProSitePatterns PS00180 Glutamine synthetase signature 1. 43 60 - T 14-09-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 PANTHER PTHR20852 1 333 1.4E-159 T 14-09-2016 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 SMART SM01230 91 333 1.5E-48 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 217 234 - T 14-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 Gene3D G3DSA:3.30.590.10 103 331 3.9E-57 T 14-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 SUPERFAMILY SSF54368 32 86 1.18E-8 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS15805 0b7d5457060d944a9dadad6e6e082083 346 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 5 84 6.5E-15 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 Pfam PF07690 Major Facilitator Superfamily 25 416 8.7E-48 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 PANTHER PTHR23501:SF73 9 512 6.3E-147 T 14-09-2016 AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 PANTHER PTHR23501 9 512 6.3E-147 T 14-09-2016 AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 SUPERFAMILY SSF103473 254 426 9.16E-71 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 SUPERFAMILY SSF103473 7 205 9.16E-71 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 SUPERFAMILY SSF103473 466 497 9.16E-71 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 Gene3D G3DSA:1.20.1250.20 21 202 2.4E-32 T 14-09-2016 AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 Gene3D G3DSA:1.20.1250.20 260 424 1.9E-17 T 14-09-2016 AMK01_RS20680 1a7d2af22bb231643489d4b774b6fcf7 512 Gene3D G3DSA:1.20.1250.20 458 499 1.9E-17 T 14-09-2016 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.256 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 SUPERFAMILY SSF74731 3 117 1.57E-47 T 14-09-2016 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 Gene3D G3DSA:1.10.1900.20 55 117 8.6E-30 T 14-09-2016 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 71 2.0E-20 T 14-09-2016 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 PANTHER PTHR10986 2 134 6.5E-60 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 PRINTS PR00062 Ribosomal protein L20 signature 12 41 5.1E-34 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 PRINTS PR00062 Ribosomal protein L20 signature 75 101 5.1E-34 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 PRINTS PR00062 Ribosomal protein L20 signature 42 71 5.1E-34 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 Pfam PF00453 Ribosomal protein L20 3 109 1.9E-47 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK01_RS01490 d20b9b7a7e5f5aaaf4e3dc4b0e6224df 134 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.5E-47 T 14-09-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 SUPERFAMILY SSF52540 4 243 1.32E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 Gene3D G3DSA:2.40.50.140 264 326 3.0E-7 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 Pfam PF00005 ABC transporter 20 161 2.7E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 SMART SM00382 28 333 9.8E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 PANTHER PTHR24220:SF151 5 272 2.9E-150 T 14-09-2016 AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 PANTHER PTHR24220 5 272 2.9E-150 T 14-09-2016 AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 Gene3D G3DSA:3.40.50.300 3 233 5.1E-77 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 Pfam PF08402 TOBE domain 261 333 6.5E-6 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS14135 8e034f34539a50e399587b36e42ab386 344 SUPERFAMILY SSF50331 236 342 2.11E-17 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 SMART SM00421 180 237 1.0E-21 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 SUPERFAMILY SSF46894 167 243 1.94E-19 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 Gene3D G3DSA:3.30.450.80 12 185 2.8E-21 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 Pfam PF03472 Autoinducer binding domain 25 169 2.1E-20 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 Gene3D G3DSA:1.10.10.10 186 243 1.3E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 SUPERFAMILY SSF75516 12 174 6.67E-23 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 237 1.4E-17 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 225 4.6E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 213 4.6E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 197 4.6E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS04375 9a90a19e416897dd1270702a3117a36a 244 ProSitePatterns PS00622 LuxR-type HTH domain signature. 197 224 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS01535 15c3f0de592c12a7dc8f1c274d175df8 320 Pfam PF00248 Aldo/keto reductase family 15 313 6.1E-69 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS01535 15c3f0de592c12a7dc8f1c274d175df8 320 PRINTS PR00069 Aldo-keto reductase signature 110 128 9.1E-10 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS01535 15c3f0de592c12a7dc8f1c274d175df8 320 PRINTS PR00069 Aldo-keto reductase signature 141 158 9.1E-10 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS01535 15c3f0de592c12a7dc8f1c274d175df8 320 PANTHER PTHR11732:SF132 1 313 4.4E-115 T 14-09-2016 AMK01_RS01535 15c3f0de592c12a7dc8f1c274d175df8 320 SUPERFAMILY SSF51430 1 313 3.67E-93 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS01535 15c3f0de592c12a7dc8f1c274d175df8 320 PANTHER PTHR11732 1 313 4.4E-115 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS01535 15c3f0de592c12a7dc8f1c274d175df8 320 Gene3D G3DSA:3.20.20.100 1 314 1.6E-91 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS22410 fe32503553e60856afae8d60bceea083 224 SUPERFAMILY SSF53850 2 224 1.07E-62 T 14-09-2016 AMK01_RS22410 fe32503553e60856afae8d60bceea083 224 PANTHER PTHR30290 1 224 6.6E-57 T 14-09-2016 AMK01_RS22410 fe32503553e60856afae8d60bceea083 224 Gene3D G3DSA:3.40.190.10 127 224 6.8E-24 T 14-09-2016 AMK01_RS22410 fe32503553e60856afae8d60bceea083 224 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 15 224 7.0E-53 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS22410 fe32503553e60856afae8d60bceea083 224 Gene3D G3DSA:3.90.76.10 1 126 9.7E-39 T 14-09-2016 AMK01_RS05930 b1493d2a76baa9f851bfd52c125ec166 163 PANTHER PTHR13256 54 143 7.9E-16 T 14-09-2016 AMK01_RS05930 b1493d2a76baa9f851bfd52c125ec166 163 Pfam PF13302 Acetyltransferase (GNAT) domain 58 141 4.0E-16 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS05930 b1493d2a76baa9f851bfd52c125ec166 163 PANTHER PTHR13256:SF42 54 143 7.9E-16 T 14-09-2016 AMK01_RS05930 b1493d2a76baa9f851bfd52c125ec166 163 SUPERFAMILY SSF55729 9 149 2.75E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS05930 b1493d2a76baa9f851bfd52c125ec166 163 Gene3D G3DSA:3.40.630.30 41 158 1.6E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 SUPERFAMILY SSF75217 126 291 1.7E-41 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 63 289 1.1E-50 T 14-09-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 PANTHER PTHR12029 26 289 7.0E-54 T 14-09-2016 AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 65 136 1.4E-12 T 14-09-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 SUPERFAMILY SSF55315 54 135 7.3E-13 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 PANTHER PTHR12029:SF58 26 289 7.0E-54 T 14-09-2016 AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 Gene3D G3DSA:3.40.1280.10 143 291 1.4E-43 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 Gene3D G3DSA:3.30.1330.30 60 134 3.5E-11 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 Pfam PF00588 SpoU rRNA Methylase family 148 288 2.4E-33 T 14-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK01_RS08350 a0a9f4b2434cf26cc62882d82b996b5c 296 SMART SM00967 65 138 2.9E-13 T 14-09-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 Gene3D G3DSA:3.40.630.30 1 208 3.8E-57 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 48 - T 14-09-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 PANTHER PTHR39322 2 221 3.4E-26 T 14-09-2016 AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 PRINTS PR01549 Autoinducer synthesis protein signature 146 167 9.8E-12 T 14-09-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 9.8E-12 T 14-09-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 9.8E-12 T 14-09-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 9.8E-12 T 14-09-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 SUPERFAMILY SSF55729 1 206 9.69E-36 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS14980 4758cfdd820503d9675d0401ba2c361f 221 Pfam PF00765 Autoinducer synthase 12 187 1.1E-32 T 14-09-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AMK01_RS04290 4cb8427b82139c856e6f4a816299d602 604 SUPERFAMILY SSF51735 401 529 1.47E-27 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04290 4cb8427b82139c856e6f4a816299d602 604 PANTHER PTHR16254 5 555 2.3E-193 T 14-09-2016 AMK01_RS04290 4cb8427b82139c856e6f4a816299d602 604 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 18 285 7.3E-78 T 14-09-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AMK01_RS04290 4cb8427b82139c856e6f4a816299d602 604 Pfam PF00999 Sodium/hydrogen exchanger family 13 373 1.6E-65 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK01_RS04290 4cb8427b82139c856e6f4a816299d602 604 PANTHER PTHR16254:SF6 5 555 2.3E-193 T 14-09-2016 AMK01_RS04290 4cb8427b82139c856e6f4a816299d602 604 Pfam PF02254 TrkA-N domain 402 512 4.0E-19 T 14-09-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMK01_RS04290 4cb8427b82139c856e6f4a816299d602 604 Gene3D G3DSA:3.40.50.720 400 529 5.0E-27 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Pfam PF03144 Elongation factor Tu domain 2 328 395 4.2E-16 T 14-09-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PANTHER PTHR23115:SF66 1 182 0.0 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PANTHER PTHR23115:SF66 259 287 0.0 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 695 109.446 T 14-09-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PANTHER PTHR23115 1 182 0.0 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 SUPERFAMILY SSF50447 269 408 8.95E-36 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PANTHER PTHR23115 307 695 0.0 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Gene3D G3DSA:3.40.50.300 5 291 4.2E-103 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Gene3D G3DSA:3.30.230.10 488 602 7.3E-46 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 286 5.6E-68 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Pfam PF14492 Elongation Factor G, domain II 408 481 8.2E-35 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-09-2016 IPR031157 Tr-type G domain, conserved site AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Gene3D G3DSA:3.30.70.870 410 484 5.9E-39 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.8E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PRINTS PR00315 GTP-binding elongation factor signature 135 144 4.8E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PRINTS PR00315 GTP-binding elongation factor signature 99 110 4.8E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PRINTS PR00315 GTP-binding elongation factor signature 83 93 4.8E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.8E-15 T 14-09-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 SUPERFAMILY SSF54211 483 602 3.03E-41 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Pfam PF00679 Elongation factor G C-terminus 604 690 6.1E-30 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 SUPERFAMILY SSF52540 5 286 4.67E-106 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 SUPERFAMILY SSF54980 406 484 5.04E-25 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Gene3D G3DSA:3.30.70.240 603 689 3.7E-32 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 SMART SM00838 604 691 1.2E-51 T 14-09-2016 IPR000640 Translation elongation factor EFG, V domain AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Gene3D G3DSA:2.40.30.10 309 409 1.2E-37 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 694 0.0 T 14-09-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PANTHER PTHR23115:SF66 307 695 0.0 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 SUPERFAMILY SSF54980 607 693 1.39E-28 T 14-09-2016 IPR009022 Elongation factor G, III-V domain AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 Pfam PF03764 Elongation factor G, domain IV 483 601 3.0E-45 T 14-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 SMART SM00889 484 602 1.1E-67 T 14-09-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 PANTHER PTHR23115 259 287 0.0 T 14-09-2016 AMK01_RS08435 f6a4ac8897df7d77fafd19e794e080ac 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 185 1.2E-36 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS14465 f55ccedeb31a5c53fe35b1db23d1b2af 158 PANTHER PTHR33990:SF2 1 158 7.0E-63 T 14-09-2016 AMK01_RS14465 f55ccedeb31a5c53fe35b1db23d1b2af 158 PIRSF PIRSF021700 1 158 3.5E-65 T 14-09-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AMK01_RS14465 f55ccedeb31a5c53fe35b1db23d1b2af 158 SUPERFAMILY SSF54593 3 156 1.37E-45 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS14465 f55ccedeb31a5c53fe35b1db23d1b2af 158 PANTHER PTHR33990 1 158 7.0E-63 T 14-09-2016 AMK01_RS14465 f55ccedeb31a5c53fe35b1db23d1b2af 158 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 118 2.7E-40 T 14-09-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase AMK01_RS14465 f55ccedeb31a5c53fe35b1db23d1b2af 158 Gene3D G3DSA:3.10.180.10 1 130 1.7E-39 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS09455 71b37e3bb7d6d20656a12a4e820b87db 204 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 17 198 3.6E-55 T 14-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMK01_RS09455 71b37e3bb7d6d20656a12a4e820b87db 204 PANTHER PTHR30098 8 200 2.4E-70 T 14-09-2016 AMK01_RS09455 71b37e3bb7d6d20656a12a4e820b87db 204 SUPERFAMILY SSF55729 7 200 4.5E-76 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09455 71b37e3bb7d6d20656a12a4e820b87db 204 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 204 82.396 T 14-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMK01_RS09455 71b37e3bb7d6d20656a12a4e820b87db 204 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 14 184 4.5E-68 T 14-09-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AMK01_RS18640 94e1634ac7c5c5d8d38363be4c5eec20 132 PANTHER PTHR10160 42 131 5.4E-33 T 14-09-2016 AMK01_RS18640 94e1634ac7c5c5d8d38363be4c5eec20 132 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 45 129 5.1E-34 T 14-09-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.9E-100 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 8.0E-39 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 PRINTS PR00151 Porphobilinogen deaminase signature 145 162 8.0E-39 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 PRINTS PR00151 Porphobilinogen deaminase signature 126 143 8.0E-39 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 PRINTS PR00151 Porphobilinogen deaminase signature 47 67 8.0E-39 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 PRINTS PR00151 Porphobilinogen deaminase signature 78 97 8.0E-39 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 PIRSF PIRSF001438 1 309 1.6E-105 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 233 249 - T 14-09-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 3.3E-71 T 14-09-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 Gene3D G3DSA:3.40.190.10 3 112 2.3E-43 T 14-09-2016 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 Gene3D G3DSA:3.30.160.40 224 304 1.2E-16 T 14-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 SUPERFAMILY SSF54782 222 308 4.18E-21 T 14-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 SUPERFAMILY SSF53850 5 220 9.41E-74 T 14-09-2016 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 Gene3D G3DSA:3.40.190.10 113 201 2.9E-32 T 14-09-2016 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 299 35.776 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 PANTHER PTHR11557 1 306 2.6E-125 T 14-09-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20080 0201b15526a47a07fabe85e68e0fc611 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 295 2.1E-13 T 14-09-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS10575 e7bbd63b6e30625378b4c7fabe6f7f3e 300 PANTHER PTHR30465 12 299 3.2E-110 T 14-09-2016 AMK01_RS10575 e7bbd63b6e30625378b4c7fabe6f7f3e 300 PANTHER PTHR30465:SF10 12 299 3.2E-110 T 14-09-2016 AMK01_RS10575 e7bbd63b6e30625378b4c7fabe6f7f3e 300 Gene3D G3DSA:1.10.3720.10 91 295 3.4E-24 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10575 e7bbd63b6e30625378b4c7fabe6f7f3e 300 SUPERFAMILY SSF161098 92 279 6.93E-26 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10575 e7bbd63b6e30625378b4c7fabe6f7f3e 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 296 2.5E-28 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10575 e7bbd63b6e30625378b4c7fabe6f7f3e 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 74 3.2E-10 T 14-09-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 PANTHER PTHR11014:SF72 1 273 1.1E-144 T 14-09-2016 AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 PANTHER PTHR11014:SF72 291 461 1.1E-144 T 14-09-2016 AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 Pfam PF01546 Peptidase family M20/M25/M40 85 458 2.9E-37 T 14-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 Gene3D G3DSA:3.40.630.10 5 198 2.2E-63 T 14-09-2016 AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 Gene3D G3DSA:3.40.630.10 374 461 2.2E-63 T 14-09-2016 AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 Pfam PF07687 Peptidase dimerisation domain 202 361 1.1E-24 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 Gene3D G3DSA:3.30.70.360 204 370 1.2E-57 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 SUPERFAMILY SSF53187 375 461 6.29E-64 T 14-09-2016 AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 SUPERFAMILY SSF53187 5 204 6.29E-64 T 14-09-2016 AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 PANTHER PTHR11014 1 273 1.1E-144 T 14-09-2016 AMK01_RS00895 3bfd5aced2a093d7d3d52bfe828f49b3 462 PANTHER PTHR11014 291 461 1.1E-144 T 14-09-2016 AMK01_RS06015 6f16eda58eebf5be42269cc54903b69d 244 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 26 0.0011 T 14-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMK01_RS06015 6f16eda58eebf5be42269cc54903b69d 244 SUPERFAMILY SSF141523 100 151 9.94E-30 T 14-09-2016 AMK01_RS06015 6f16eda58eebf5be42269cc54903b69d 244 SUPERFAMILY SSF141523 181 243 9.94E-30 T 14-09-2016 AMK01_RS06015 6f16eda58eebf5be42269cc54903b69d 244 Pfam PF03734 L,D-transpeptidase catalytic domain 105 242 8.4E-15 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS06015 6f16eda58eebf5be42269cc54903b69d 244 Gene3D G3DSA:2.40.440.10 99 242 8.2E-32 T 14-09-2016 AMK01_RS06015 6f16eda58eebf5be42269cc54903b69d 244 PANTHER PTHR30582:SF1 84 244 5.3E-41 T 14-09-2016 AMK01_RS06015 6f16eda58eebf5be42269cc54903b69d 244 PANTHER PTHR30582 84 244 5.3E-41 T 14-09-2016 AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 SUPERFAMILY SSF53901 1 261 3.67E-76 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 PANTHER PTHR11712 1 418 6.3E-217 T 14-09-2016 AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 262 375 1.2E-34 T 14-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 SMART SM00825 Beta-ketoacyl synthase 4 420 3.4E-14 T 14-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 Gene3D G3DSA:3.40.47.10 271 418 6.6E-59 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 254 2.4E-59 T 14-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 PANTHER PTHR11712:SF273 1 418 6.3E-217 T 14-09-2016 AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 161 177 - T 14-09-2016 IPR018201 Beta-ketoacyl synthase, active site AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 416 2.0E-186 T 14-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 SUPERFAMILY SSF53901 221 418 1.75E-70 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 Gene3D G3DSA:3.40.47.10 1 267 7.7E-77 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS07400 3425e40103070918f6cc6d1c30c11ab2 420 PIRSF PIRSF000447 1 420 6.6E-196 T 14-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 298 2.4E-127 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 SMART SM00881 4 106 8.9E-30 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 SUPERFAMILY SSF51735 1 128 4.24E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 PANTHER PTHR11117:SF2 1 299 1.8E-175 T 14-09-2016 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 246 259 - T 14-09-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 SUPERFAMILY SSF52210 129 298 4.71E-50 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 PANTHER PTHR11117 1 299 1.8E-175 T 14-09-2016 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 158 187 - T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 Pfam PF00549 CoA-ligase 157 279 1.7E-17 T 14-09-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 PIRSF PIRSF001553 1 300 1.3E-120 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 Gene3D G3DSA:3.40.50.720 2 125 3.4E-51 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 Gene3D G3DSA:3.40.50.261 126 297 1.9E-68 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 Pfam PF02629 CoA binding domain 6 105 2.5E-22 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 PRINTS PR01798 Succinyl-CoA synthase signature 214 227 8.3E-38 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 PRINTS PR01798 Succinyl-CoA synthase signature 183 201 8.3E-38 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 PRINTS PR01798 Succinyl-CoA synthase signature 250 267 8.3E-38 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK01_RS20000 442a113a08557374534707490ebc8ee3 300 PRINTS PR01798 Succinyl-CoA synthase signature 88 105 8.3E-38 T 14-09-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AMK01_RS01650 2eb75005ddb8bdf8b0dbcd7271accad5 156 PANTHER PTHR13256 1 139 2.7E-15 T 14-09-2016 AMK01_RS01650 2eb75005ddb8bdf8b0dbcd7271accad5 156 Gene3D G3DSA:3.40.630.30 37 151 2.1E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS01650 2eb75005ddb8bdf8b0dbcd7271accad5 156 SUPERFAMILY SSF55729 2 144 4.29E-21 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS01650 2eb75005ddb8bdf8b0dbcd7271accad5 156 Pfam PF13302 Acetyltransferase (GNAT) domain 52 135 1.4E-15 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS10735 415cfdd67e4e2cae03168fc102142755 235 PANTHER PTHR31876:SF1 10 211 5.7E-57 T 14-09-2016 AMK01_RS10735 415cfdd67e4e2cae03168fc102142755 235 Pfam PF04367 Protein of unknown function (DUF502) 70 177 2.6E-35 T 14-09-2016 IPR007462 Protein of unknown function DUF502 AMK01_RS10735 415cfdd67e4e2cae03168fc102142755 235 PANTHER PTHR31876 10 211 5.7E-57 T 14-09-2016 AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 SUPERFAMILY SSF75553 506 644 5.1E-6 T 14-09-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 Gene3D G3DSA:3.40.50.300 958 970 2.0E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 Gene3D G3DSA:3.40.50.300 1003 1145 2.0E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 Gene3D G3DSA:3.40.50.300 1 166 2.0E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 PANTHER PTHR18937 1 1146 3.1E-231 T 14-09-2016 AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 PANTHER PTHR18937:SF261 1 1146 3.1E-231 T 14-09-2016 AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 SUPERFAMILY SSF52540 1 210 5.6E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 SUPERFAMILY SSF52540 942 1142 5.6E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1145 20.327 T 14-09-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMK01_RS05080 e879ce2e612dd17813153320a42a7b34 1153 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 1136 3.9E-58 T 14-09-2016 IPR003395 RecF/RecN/SMC, N-terminal AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 PANTHER PTHR21198 2 265 3.3E-62 T 14-09-2016 AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 SUPERFAMILY SSF53681 116 263 6.32E-29 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 Hamap MF_00258 Glutamate racemase [murI]. 9 265 30.072 T 14-09-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 SUPERFAMILY SSF53681 10 113 2.16E-24 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 Gene3D G3DSA:3.40.50.1860 9 177 4.3E-39 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 PANTHER PTHR21198:SF2 2 265 3.3E-62 T 14-09-2016 AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 190 200 - T 14-09-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 11 233 5.6E-48 T 14-09-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS11850 dc9fe273f944f4359314e5ae54a5d9b3 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 13 225 4.5E-15 T 14-09-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 PANTHER PTHR10357:SF158 59 733 0.0 T 14-09-2016 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 SUPERFAMILY SSF81296 25 121 7.35E-14 T 14-09-2016 IPR014756 Immunoglobulin E-set AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 SMART SM00642 261 605 2.6E-6 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 SUPERFAMILY SSF51445 182 627 1.68E-107 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 PIRSF PIRSF000463 17 735 3.2E-281 T 14-09-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 Gene3D G3DSA:2.60.40.10 25 116 3.0E-10 T 14-09-2016 IPR013783 Immunoglobulin-like fold AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 Gene3D G3DSA:2.60.40.10 124 230 2.4E-34 T 14-09-2016 IPR013783 Immunoglobulin-like fold AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 SUPERFAMILY SSF81296 127 229 1.03E-30 T 14-09-2016 IPR014756 Immunoglobulin E-set AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 Gene3D G3DSA:2.60.40.1180 635 733 5.1E-30 T 14-09-2016 IPR013780 Glycosyl hydrolase, all-beta AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 Gene3D G3DSA:3.20.20.80 251 618 5.5E-87 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 SUPERFAMILY SSF51011 635 734 1.8E-28 T 14-09-2016 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 110 734 43.94 T 14-09-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 639 733 5.0E-21 T 14-09-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 Pfam PF00128 Alpha amylase, catalytic domain 286 358 1.2E-7 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 PANTHER PTHR10357 59 733 0.0 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 119 731 4.1E-267 T 14-09-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18540 7dc3e1da1fb7bf8d05d98f908ae91a71 735 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 133 217 8.7E-22 T 14-09-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 SUPERFAMILY SSF53067 244 481 4.36E-56 T 14-09-2016 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 SUPERFAMILY SSF53067 2 244 1.67E-70 T 14-09-2016 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 127 139 - T 14-09-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 PANTHER PTHR10196:SF72 1 437 1.8E-173 T 14-09-2016 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 Gene3D G3DSA:3.30.420.40 245 481 3.5E-46 T 14-09-2016 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 476 1.2E-177 T 14-09-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 251 436 2.4E-30 T 14-09-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 PIRSF PIRSF000538 1 484 1.6E-126 T 14-09-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 PANTHER PTHR10196 1 437 1.8E-173 T 14-09-2016 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 242 2.0E-68 T 14-09-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMK01_RS18845 c596d1e0030b48d89f7f417509edf40d 484 Gene3D G3DSA:3.30.420.40 1 242 2.5E-61 T 14-09-2016 AMK01_RS03985 da800996250d6e71aea8496e799768bd 210 Pfam PF02585 GlcNAc-PI de-N-acetylase 4 124 1.1E-15 T 14-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMK01_RS03985 da800996250d6e71aea8496e799768bd 210 PANTHER PTHR12993 1 172 5.6E-13 T 14-09-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related AMK01_RS03985 da800996250d6e71aea8496e799768bd 210 SUPERFAMILY SSF102588 1 208 5.62E-38 T 14-09-2016 IPR024078 Putative deacetylase LmbE-like domain AMK01_RS03985 da800996250d6e71aea8496e799768bd 210 Gene3D G3DSA:3.40.50.10320 2 208 5.7E-42 T 14-09-2016 IPR024078 Putative deacetylase LmbE-like domain AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 PANTHER PTHR21581:SF3 25 258 5.6E-64 T 14-09-2016 AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 Gene3D G3DSA:3.30.70.1070 340 423 1.3E-5 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 Gene3D G3DSA:3.40.710.10 4 258 3.3E-84 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 Pfam PF05036 Sporulation related domain 343 423 1.8E-11 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 PANTHER PTHR21581 25 258 5.6E-64 T 14-09-2016 AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 16 243 6.4E-63 T 14-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 143 4.1E-12 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 50 61 4.1E-12 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 103 120 4.1E-12 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 SUPERFAMILY SSF56601 5 259 5.99E-74 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS04800 c377833adf9facb4bf98708f721b4f02 427 SUPERFAMILY SSF110997 343 423 2.22E-6 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AMK01_RS17335 d815670e0d1f9c4a1aef69f1823b93ef 451 Gene3D G3DSA:3.40.190.10 161 356 4.0E-25 T 14-09-2016 AMK01_RS17335 d815670e0d1f9c4a1aef69f1823b93ef 451 Pfam PF13416 Bacterial extracellular solute-binding protein 48 358 1.4E-33 T 14-09-2016 AMK01_RS17335 d815670e0d1f9c4a1aef69f1823b93ef 451 PANTHER PTHR30061 1 449 2.4E-91 T 14-09-2016 AMK01_RS17335 d815670e0d1f9c4a1aef69f1823b93ef 451 SUPERFAMILY SSF53850 24 435 1.43E-56 T 14-09-2016 AMK01_RS17335 d815670e0d1f9c4a1aef69f1823b93ef 451 PANTHER PTHR30061:SF7 1 449 2.4E-91 T 14-09-2016 AMK01_RS17335 d815670e0d1f9c4a1aef69f1823b93ef 451 Gene3D G3DSA:3.40.190.10 42 160 3.1E-8 T 14-09-2016 AMK01_RS08280 7ea44ff4ddcd5c079283f003bc3a2f68 206 Pfam PF02660 Glycerol-3-phosphate acyltransferase 21 194 2.0E-48 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS08280 7ea44ff4ddcd5c079283f003bc3a2f68 206 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 14 204 6.8E-51 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS08280 7ea44ff4ddcd5c079283f003bc3a2f68 206 PANTHER PTHR30309 10 205 2.7E-63 T 14-09-2016 AMK01_RS08280 7ea44ff4ddcd5c079283f003bc3a2f68 206 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 17 203 20.211 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS08280 7ea44ff4ddcd5c079283f003bc3a2f68 206 SMART SM01207 20 195 3.1E-81 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS08280 7ea44ff4ddcd5c079283f003bc3a2f68 206 PANTHER PTHR30309:SF0 10 205 2.7E-63 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 PANTHER PTHR30537:SF5 1 307 1.5E-116 T 14-09-2016 AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 SUPERFAMILY SSF46785 2 86 1.44E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 PANTHER PTHR30537 1 307 1.5E-116 T 14-09-2016 AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 Gene3D G3DSA:3.40.190.10 92 176 5.0E-22 T 14-09-2016 AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 SUPERFAMILY SSF53850 89 293 1.99E-49 T 14-09-2016 AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.3E-20 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 Gene3D G3DSA:1.10.10.10 1 86 5.4E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 Pfam PF03466 LysR substrate binding domain 88 291 1.3E-47 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS13110 a3b70693b5b3925249460880d0ff0b5c 307 Gene3D G3DSA:3.40.190.10 177 260 2.7E-22 T 14-09-2016 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 291 - T 14-09-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 Gene3D G3DSA:3.30.1490.20 22 105 2.4E-29 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 395 5.9E-147 T 14-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 Pfam PF08442 ATP-grasp domain 2 212 1.2E-65 T 14-09-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 Gene3D G3DSA:3.40.50.261 252 393 2.9E-65 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 39.625 T 14-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 SUPERFAMILY SSF52210 251 395 4.19E-54 T 14-09-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 PANTHER PTHR11815 1 396 6.3E-212 T 14-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 Gene3D G3DSA:3.30.470.20 106 249 5.4E-52 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 SUPERFAMILY SSF56059 1 248 2.16E-71 T 14-09-2016 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 PANTHER PTHR11815:SF1 1 396 6.3E-212 T 14-09-2016 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 PIRSF PIRSF001554 1 397 9.7E-141 T 14-09-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 AMK01_RS20005 0c3e21a749fc9df8429600164df8151f 397 Pfam PF00549 CoA-ligase 272 391 2.1E-25 T 14-09-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 608 2.3E-254 T 14-09-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 PANTHER PTHR21000 406 621 0.0 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 45.449 T 14-09-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 PANTHER PTHR21000 1 371 0.0 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 PANTHER PTHR21000:SF11 1 371 0.0 T 14-09-2016 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 PANTHER PTHR21000:SF11 406 621 0.0 T 14-09-2016 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 SUPERFAMILY SSF52016 421 609 1.18E-61 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 Pfam PF00920 Dehydratase family 34 605 3.4E-222 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS08595 48a2ea94dfe4e8342fc9ca047e9101bb 621 SUPERFAMILY SSF143975 4 420 8.5E-136 T 14-09-2016 AMK01_RS05530 97cc15775241b8dc2c205bc5f0b4cb4a 284 PANTHER PTHR17630 66 283 9.8E-21 T 14-09-2016 AMK01_RS05530 97cc15775241b8dc2c205bc5f0b4cb4a 284 SUPERFAMILY SSF53474 10 282 4.28E-33 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS05530 97cc15775241b8dc2c205bc5f0b4cb4a 284 Pfam PF01738 Dienelactone hydrolase family 66 282 2.9E-14 T 14-09-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMK01_RS05530 97cc15775241b8dc2c205bc5f0b4cb4a 284 Gene3D G3DSA:3.40.50.1820 55 281 6.6E-39 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS00465 84a688d244af8114c506fbdaa03a5cbd 471 Gene3D G3DSA:3.20.20.140 153 471 9.5E-133 T 14-09-2016 AMK01_RS00465 84a688d244af8114c506fbdaa03a5cbd 471 Gene3D G3DSA:3.20.20.140 9 51 9.5E-133 T 14-09-2016 AMK01_RS00465 84a688d244af8114c506fbdaa03a5cbd 471 SUPERFAMILY SSF51556 6 470 6.35E-146 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS00465 84a688d244af8114c506fbdaa03a5cbd 471 Gene3D G3DSA:1.10.2020.10 53 152 1.0E-30 T 14-09-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 AMK01_RS00465 84a688d244af8114c506fbdaa03a5cbd 471 PANTHER PTHR30068 11 471 5.7E-130 T 14-09-2016 AMK01_RS00465 84a688d244af8114c506fbdaa03a5cbd 471 Pfam PF02614 Glucuronate isomerase 21 467 8.0E-71 T 14-09-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 AMK01_RS00465 84a688d244af8114c506fbdaa03a5cbd 471 PANTHER PTHR30068:SF4 11 471 5.7E-130 T 14-09-2016 AMK01_RS03600 754ae08a95102bb482823e2319101465 436 Pfam PF07559 Flagellar basal body protein FlaE 192 308 2.9E-9 T 14-09-2016 IPR011491 Flagellar hook protein FlgE AMK01_RS03600 754ae08a95102bb482823e2319101465 436 SUPERFAMILY SSF117143 81 396 1.09E-62 T 14-09-2016 AMK01_RS03600 754ae08a95102bb482823e2319101465 436 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-09-2016 IPR019776 Flagellar basal body rod protein, conserved site AMK01_RS03600 754ae08a95102bb482823e2319101465 436 PANTHER PTHR30435 2 125 8.6E-70 T 14-09-2016 AMK01_RS03600 754ae08a95102bb482823e2319101465 436 PANTHER PTHR30435 313 436 8.6E-70 T 14-09-2016 AMK01_RS03600 754ae08a95102bb482823e2319101465 436 PANTHER PTHR30435:SF1 313 436 8.6E-70 T 14-09-2016 AMK01_RS03600 754ae08a95102bb482823e2319101465 436 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 417 1.5E-92 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AMK01_RS03600 754ae08a95102bb482823e2319101465 436 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 362 434 1.4E-18 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK01_RS03600 754ae08a95102bb482823e2319101465 436 Pfam PF00460 Flagella basal body rod protein 7 37 1.2E-12 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK01_RS03600 754ae08a95102bb482823e2319101465 436 PANTHER PTHR30435:SF1 2 125 8.6E-70 T 14-09-2016 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 Pfam PF13454 FAD-NAD(P)-binding 31 183 2.2E-32 T 14-09-2016 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 PANTHER PTHR40254 13 491 1.5E-58 T 14-09-2016 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 Gene3D G3DSA:3.50.50.60 18 72 3.3E-17 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 Gene3D G3DSA:3.50.50.60 115 229 3.3E-17 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 SUPERFAMILY SSF51905 220 481 9.88E-6 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 SUPERFAMILY SSF51905 28 252 1.04E-18 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 Gene3D G3DSA:3.50.50.60 336 398 4.0E-6 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 Gene3D G3DSA:3.50.50.60 230 252 4.0E-6 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03300 585c6fa0c368ed89915c944396a84266 494 PANTHER PTHR40254:SF1 13 491 1.5E-58 T 14-09-2016 AMK01_RS15705 e77021430ab1b3bfd60816390cbf24ce 194 PANTHER PTHR11441 1 191 9.0E-58 T 14-09-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK01_RS15705 e77021430ab1b3bfd60816390cbf24ce 194 Gene3D G3DSA:3.30.60.20 143 190 4.3E-18 T 14-09-2016 AMK01_RS15705 e77021430ab1b3bfd60816390cbf24ce 194 Pfam PF00265 Thymidine kinase 2 187 1.2E-47 T 14-09-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK01_RS15705 e77021430ab1b3bfd60816390cbf24ce 194 SUPERFAMILY SSF52540 1 141 1.33E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15705 e77021430ab1b3bfd60816390cbf24ce 194 PIRSF PIRSF035805 1 193 9.6E-53 T 14-09-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK01_RS15705 e77021430ab1b3bfd60816390cbf24ce 194 Hamap MF_00124 Thymidine kinase [tdk]. 1 190 33.691 T 14-09-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK01_RS15705 e77021430ab1b3bfd60816390cbf24ce 194 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 14-09-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK01_RS15705 e77021430ab1b3bfd60816390cbf24ce 194 SUPERFAMILY SSF57716 143 189 2.38E-15 T 14-09-2016 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 PANTHER PTHR30363:SF14 1 228 2.0E-63 T 14-09-2016 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 Gene3D G3DSA:1.10.10.10 5 55 3.6E-7 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 SUPERFAMILY SSF100950 74 229 1.67E-22 T 14-09-2016 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 3.8E-14 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 SMART SM00420 6 58 4.3E-11 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 PANTHER PTHR30363 1 228 2.0E-63 T 14-09-2016 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.8E-9 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.8E-9 T 14-09-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 Gene3D G3DSA:3.40.50.1360 75 210 3.6E-8 T 14-09-2016 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 SMART SM01134 71 231 1.5E-57 T 14-09-2016 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-09-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 SUPERFAMILY SSF46785 4 60 8.1E-11 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05885 f4b6361db8dad1c4456fb1f404f35a10 250 Pfam PF00455 DeoR C terminal sensor domain 74 227 1.0E-39 T 14-09-2016 IPR014036 DeoR C-terminal sensor domain AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 Gene3D G3DSA:1.10.101.10 223 258 4.2E-6 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 Pfam PF01471 Putative peptidoglycan binding domain 223 257 7.0E-5 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 SUPERFAMILY SSF47090 212 261 2.43E-7 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 Gene3D G3DSA:2.40.440.10 25 138 1.7E-21 T 14-09-2016 AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 PANTHER PTHR30582 31 232 1.6E-33 T 14-09-2016 AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 SUPERFAMILY SSF141523 29 138 2.49E-29 T 14-09-2016 AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 Pfam PF03734 L,D-transpeptidase catalytic domain 31 138 6.9E-20 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 PIRSF PIRSF029342 14 418 3.8E-117 T 14-09-2016 IPR016915 Uncharacterised conserved protein UCP029342 AMK01_RS08215 b2ff054cbd29bd4ce1b02435f8d453e9 418 PANTHER PTHR30582:SF2 31 232 1.6E-33 T 14-09-2016 AMK01_RS17365 0cea0b8a7bad719bd35f28fccf9c1fce 309 PANTHER PTHR10584 1 291 4.5E-40 T 14-09-2016 AMK01_RS17365 0cea0b8a7bad719bd35f28fccf9c1fce 309 Gene3D G3DSA:3.40.1190.20 1 294 1.4E-53 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS17365 0cea0b8a7bad719bd35f28fccf9c1fce 309 SUPERFAMILY SSF53613 2 294 6.08E-51 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS17365 0cea0b8a7bad719bd35f28fccf9c1fce 309 Pfam PF00294 pfkB family carbohydrate kinase 3 292 8.8E-33 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AMK01_RS17365 0cea0b8a7bad719bd35f28fccf9c1fce 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 14-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK01_RS08915 fdbfb8cf7b1eb43cab5ba201f7732a96 204 PANTHER PTHR10204 1 204 7.3E-69 T 14-09-2016 AMK01_RS08915 fdbfb8cf7b1eb43cab5ba201f7732a96 204 SUPERFAMILY SSF52218 1 200 4.82E-50 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS08915 fdbfb8cf7b1eb43cab5ba201f7732a96 204 Gene3D G3DSA:3.40.50.360 1 201 1.7E-62 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS08915 fdbfb8cf7b1eb43cab5ba201f7732a96 204 PANTHER PTHR10204:SF16 1 204 7.3E-69 T 14-09-2016 AMK01_RS08915 fdbfb8cf7b1eb43cab5ba201f7732a96 204 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 201 30.636 T 14-09-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AMK01_RS08915 fdbfb8cf7b1eb43cab5ba201f7732a96 204 Pfam PF02525 Flavodoxin-like fold 3 199 1.0E-42 T 14-09-2016 IPR003680 Flavodoxin-like fold AMK01_RS13250 b40b7718fca22978db0e9c6a200240a6 213 PANTHER PTHR38011 2 213 1.5E-50 T 14-09-2016 AMK01_RS13250 b40b7718fca22978db0e9c6a200240a6 213 PANTHER PTHR38011:SF1 2 213 1.5E-50 T 14-09-2016 AMK01_RS13250 b40b7718fca22978db0e9c6a200240a6 213 SUPERFAMILY SSF53597 9 27 6.49E-25 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS13250 b40b7718fca22978db0e9c6a200240a6 213 SUPERFAMILY SSF53597 55 202 6.49E-25 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS13250 b40b7718fca22978db0e9c6a200240a6 213 Pfam PF01872 RibD C-terminal domain 9 207 5.5E-18 T 14-09-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMK01_RS13250 b40b7718fca22978db0e9c6a200240a6 213 Gene3D G3DSA:3.40.430.10 8 209 1.9E-38 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS08170 9442b261c82c64d06e65d6e977cec24c 254 Pfam PF03099 Biotin/lipoate A/B protein ligase family 41 146 1.3E-10 T 14-09-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AMK01_RS08170 9442b261c82c64d06e65d6e977cec24c 254 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 18 251 3.7E-49 T 14-09-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK01_RS08170 9442b261c82c64d06e65d6e977cec24c 254 Gene3D G3DSA:3.30.930.10 13 203 2.6E-54 T 14-09-2016 AMK01_RS08170 9442b261c82c64d06e65d6e977cec24c 254 Gene3D G3DSA:2.30.30.100 209 251 5.3E-8 T 14-09-2016 AMK01_RS08170 9442b261c82c64d06e65d6e977cec24c 254 Pfam PF02237 Biotin protein ligase C terminal domain 209 254 1.3E-8 T 14-09-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 AMK01_RS08170 9442b261c82c64d06e65d6e977cec24c 254 SUPERFAMILY SSF55681 14 203 2.36E-47 T 14-09-2016 AMK01_RS08170 9442b261c82c64d06e65d6e977cec24c 254 SUPERFAMILY SSF50037 210 253 1.74E-6 T 14-09-2016 IPR008988 Transcriptional repressor, C-terminal AMK01_RS08170 9442b261c82c64d06e65d6e977cec24c 254 PANTHER PTHR12835 21 253 3.6E-55 T 14-09-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK01_RS12905 9f336708fa5b6af698094a17d4fee032 176 Gene3D G3DSA:3.40.50.270 6 143 1.4E-37 T 14-09-2016 AMK01_RS12905 9f336708fa5b6af698094a17d4fee032 176 SMART SM00226 7 145 3.9E-25 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK01_RS12905 9f336708fa5b6af698094a17d4fee032 176 PANTHER PTHR11717 5 162 1.1E-30 T 14-09-2016 AMK01_RS12905 9f336708fa5b6af698094a17d4fee032 176 PANTHER PTHR11717:SF18 5 162 1.1E-30 T 14-09-2016 AMK01_RS12905 9f336708fa5b6af698094a17d4fee032 176 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 124 1.0E-14 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK01_RS12905 9f336708fa5b6af698094a17d4fee032 176 SUPERFAMILY SSF52788 7 145 1.57E-37 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 PANTHER PTHR22683 386 888 3.0E-237 T 14-09-2016 AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 PANTHER PTHR22683:SF41 386 888 3.0E-237 T 14-09-2016 AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 Gene3D G3DSA:3.40.50.300 476 638 4.0E-94 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 Gene3D G3DSA:3.40.50.300 671 783 4.0E-94 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 SMART SM00843 824 888 8.5E-38 T 14-09-2016 IPR018541 FtsK gamma domain AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 SMART SM00382 534 739 0.0012 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 Pfam PF01580 FtsK/SpoIIIE family 499 718 1.4E-64 T 14-09-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 Pfam PF09397 Ftsk gamma domain 826 885 7.0E-26 T 14-09-2016 IPR018541 FtsK gamma domain AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 26 179 8.8E-19 T 14-09-2016 IPR025199 DNA translocase FtsK, 4TM region AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 SUPERFAMILY SSF46785 824 888 9.93E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20400 5676935bd05a471d6abb490a00cbc8c2 894 SUPERFAMILY SSF52540 479 788 4.85E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07080 9fed38581cf26ae05c133a4b535c738a 196 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 26 175 2.3E-36 T 14-09-2016 IPR018639 Domain of unknown function DUF2062 AMK01_RS07080 9fed38581cf26ae05c133a4b535c738a 196 PANTHER PTHR40547:SF1 2 189 5.6E-14 T 14-09-2016 AMK01_RS07080 9fed38581cf26ae05c133a4b535c738a 196 PANTHER PTHR40547 2 189 5.6E-14 T 14-09-2016 AMK01_RS09795 c8e43c3fd87bd49b907f044da53ed1ee 348 SUPERFAMILY SSF52518 29 347 2.16E-109 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS09795 c8e43c3fd87bd49b907f044da53ed1ee 348 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 34 347 1.0E-154 T 14-09-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AMK01_RS09795 c8e43c3fd87bd49b907f044da53ed1ee 348 Pfam PF00676 Dehydrogenase E1 component 42 339 4.4E-109 T 14-09-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AMK01_RS09795 c8e43c3fd87bd49b907f044da53ed1ee 348 PANTHER PTHR11516:SF40 33 346 3.0E-177 T 14-09-2016 AMK01_RS09795 c8e43c3fd87bd49b907f044da53ed1ee 348 Gene3D G3DSA:3.40.50.970 27 346 4.1E-139 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS09795 c8e43c3fd87bd49b907f044da53ed1ee 348 PANTHER PTHR11516 33 346 3.0E-177 T 14-09-2016 AMK01_RS01510 96ca8ba1c1ff478acea23da1baf7ecf8 331 Gene3D G3DSA:3.20.20.100 1 322 2.2E-116 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS01510 96ca8ba1c1ff478acea23da1baf7ecf8 331 Pfam PF00248 Aldo/keto reductase family 15 310 1.7E-79 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS01510 96ca8ba1c1ff478acea23da1baf7ecf8 331 SUPERFAMILY SSF51430 1 310 1.96E-102 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS01510 96ca8ba1c1ff478acea23da1baf7ecf8 331 PANTHER PTHR11732:SF215 1 331 7.7E-158 T 14-09-2016 AMK01_RS01510 96ca8ba1c1ff478acea23da1baf7ecf8 331 PANTHER PTHR11732 1 331 7.7E-158 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 Pfam PF01494 FAD binding domain 2 343 2.5E-92 T 14-09-2016 IPR002938 FAD-binding domain GO:0071949 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 4.3E-27 T 14-09-2016 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.3E-27 T 14-09-2016 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 4.3E-27 T 14-09-2016 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 4.3E-27 T 14-09-2016 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 SUPERFAMILY SSF51905 3 172 2.96E-49 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 SUPERFAMILY SSF51905 274 389 2.96E-49 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 8.0E-203 T 14-09-2016 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 PANTHER PTHR13789:SF192 1 389 9.0E-188 T 14-09-2016 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 PANTHER PTHR13789 1 389 9.0E-188 T 14-09-2016 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 Gene3D G3DSA:3.40.50.720 4 52 2.5E-6 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 Gene3D G3DSA:3.40.50.720 96 110 2.5E-6 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 Gene3D G3DSA:3.30.9.10 138 299 3.5E-67 T 14-09-2016 AMK01_RS17775 6a6fa504849e51c290046872d0a0437d 390 SUPERFAMILY SSF54373 175 275 3.65E-44 T 14-09-2016 AMK01_RS16080 baf54bf6fd4e8d5e8230957ab1af6d8b 274 PANTHER PTHR33490 1 273 2.3E-68 T 14-09-2016 AMK01_RS16080 baf54bf6fd4e8d5e8230957ab1af6d8b 274 Pfam PF01841 Transglutaminase-like superfamily 123 219 3.2E-28 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS16080 baf54bf6fd4e8d5e8230957ab1af6d8b 274 PANTHER PTHR33490:SF5 1 273 2.3E-68 T 14-09-2016 AMK01_RS16080 baf54bf6fd4e8d5e8230957ab1af6d8b 274 Gene3D G3DSA:3.90.260.10 142 231 3.0E-13 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS16080 baf54bf6fd4e8d5e8230957ab1af6d8b 274 SMART SM00460 157 221 1.2E-16 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS16080 baf54bf6fd4e8d5e8230957ab1af6d8b 274 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 4.2E-19 T 14-09-2016 IPR013589 Bacterial transglutaminase-like, N-terminal AMK01_RS16080 baf54bf6fd4e8d5e8230957ab1af6d8b 274 SUPERFAMILY SSF54001 7 248 9.95E-45 T 14-09-2016 AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 PANTHER PTHR30328 5 193 9.5E-25 T 14-09-2016 AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 SUPERFAMILY SSF46689 3 73 1.49E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 PANTHER PTHR30328:SF18 5 193 9.5E-25 T 14-09-2016 AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.3E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.3E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 Gene3D G3DSA:1.10.357.10 59 180 6.5E-34 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 SUPERFAMILY SSF48498 78 180 5.34E-21 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 Gene3D G3DSA:1.10.10.60 4 58 1.8E-19 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02500 bd20366e779ad09090889ad56216ceca 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 3.7E-16 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 Pfam PF06472 ABC transporter transmembrane region 2 83 346 2.4E-42 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 SUPERFAMILY SSF90123 60 390 1.44E-23 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 PANTHER PTHR11384:SF3 33 617 1.3E-207 T 14-09-2016 AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 ProSitePatterns PS00211 ABC transporters family signature. 546 560 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 Gene3D G3DSA:1.20.1560.10 88 394 2.0E-13 T 14-09-2016 AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 PANTHER PTHR11384 33 617 1.3E-207 T 14-09-2016 AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 SUPERFAMILY SSF52540 419 617 1.51E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 Gene3D G3DSA:3.40.50.300 421 612 4.2E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 SMART SM00382 448 637 8.7E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 452 465 - T 14-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMK01_RS02670 462bc8b342c9559c260a33aa324e532c 649 Pfam PF00005 ABC transporter 440 574 1.5E-21 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 PANTHER PTHR23132 1 356 3.1E-134 T 14-09-2016 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 SUPERFAMILY SSF56059 138 347 3.89E-55 T 14-09-2016 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 351 39.875 T 14-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 14-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 SUPERFAMILY SSF52440 7 136 3.07E-32 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 Pfam PF07478 D-ala D-ala ligase C-terminus 145 347 1.4E-63 T 14-09-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 Pfam PF01820 D-ala D-ala ligase N-terminus 9 128 4.6E-30 T 14-09-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 PIRSF PIRSF039102 5 357 1.0E-102 T 14-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 105 116 - T 14-09-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 Gene3D G3DSA:3.30.1490.20 148 219 7.9E-22 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 Gene3D G3DSA:3.30.470.20 220 356 1.6E-45 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 347 1.8E-96 T 14-09-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 PANTHER PTHR23132:SF8 1 356 3.1E-134 T 14-09-2016 AMK01_RS12605 ea567636dbc89805cc924a585b9a93a4 358 Gene3D G3DSA:3.40.50.20 7 126 7.0E-31 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS15765 882f77233ae3d082dda14c41bbd57427 526 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 448 4.1E-88 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS15765 882f77233ae3d082dda14c41bbd57427 526 Gene3D G3DSA:3.10.105.10 283 496 1.1E-65 T 14-09-2016 AMK01_RS15765 882f77233ae3d082dda14c41bbd57427 526 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 14-09-2016 IPR023765 Solute-binding protein family 5, conserved site AMK01_RS15765 882f77233ae3d082dda14c41bbd57427 526 Gene3D G3DSA:3.90.76.10 34 208 4.3E-58 T 14-09-2016 AMK01_RS15765 882f77233ae3d082dda14c41bbd57427 526 PIRSF PIRSF002741 20 525 1.3E-116 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK01_RS15765 882f77233ae3d082dda14c41bbd57427 526 PANTHER PTHR30290:SF10 1 526 4.8E-172 T 14-09-2016 AMK01_RS15765 882f77233ae3d082dda14c41bbd57427 526 SUPERFAMILY SSF53850 21 515 3.37E-143 T 14-09-2016 AMK01_RS15765 882f77233ae3d082dda14c41bbd57427 526 PANTHER PTHR30290 1 526 4.8E-172 T 14-09-2016 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 222 4.5E-63 T 14-09-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 SUPERFAMILY SSF51366 5 226 1.57E-67 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 PANTHER PTHR32119:SF2 1 234 3.1E-80 T 14-09-2016 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 14-09-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 4 227 34.937 T 14-09-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 Gene3D G3DSA:3.20.20.70 3 226 1.5E-74 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 SMART SM00934 6 222 7.8E-81 T 14-09-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 PANTHER PTHR32119 1 234 3.1E-80 T 14-09-2016 AMK01_RS01755 3cb92e603d050bc3b0b029e5aa56387f 235 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 221 1.0E-49 T 14-09-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS20335 d6f7a5209e64349b7fd3cf812ebbfe52 123 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.896 T 14-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20335 d6f7a5209e64349b7fd3cf812ebbfe52 123 SUPERFAMILY SSF54565 3 85 2.75E-30 T 14-09-2016 IPR023803 Ribosomal protein S16 domain AMK01_RS20335 d6f7a5209e64349b7fd3cf812ebbfe52 123 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 2.2E-31 T 14-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20335 d6f7a5209e64349b7fd3cf812ebbfe52 123 Gene3D G3DSA:3.30.1320.10 3 83 2.3E-32 T 14-09-2016 IPR023803 Ribosomal protein S16 domain AMK01_RS20335 d6f7a5209e64349b7fd3cf812ebbfe52 123 Pfam PF00886 Ribosomal protein S16 9 70 8.1E-26 T 14-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20335 d6f7a5209e64349b7fd3cf812ebbfe52 123 PANTHER PTHR12919 2 123 4.9E-44 T 14-09-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS16135 a6ec2168d6a06d50b814302f876423f8 289 Gene3D G3DSA:2.170.16.10 77 240 2.9E-17 T 14-09-2016 IPR028992 Hedgehog/Intein (Hint) domain AMK01_RS16135 a6ec2168d6a06d50b814302f876423f8 289 Pfam PF13403 Hint domain 81 216 1.2E-41 T 14-09-2016 IPR028992 Hedgehog/Intein (Hint) domain AMK01_RS16135 a6ec2168d6a06d50b814302f876423f8 289 SUPERFAMILY SSF51294 80 168 4.84E-14 T 14-09-2016 IPR028992 Hedgehog/Intein (Hint) domain AMK01_RS03955 8d4c7c69a74336a66c918871b2f0dc4e 281 Gene3D G3DSA:3.40.50.720 5 164 2.5E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03955 8d4c7c69a74336a66c918871b2f0dc4e 281 PRINTS PR01713 Nucleotide sugar epimerase signature 247 264 9.4E-6 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK01_RS03955 8d4c7c69a74336a66c918871b2f0dc4e 281 PRINTS PR01713 Nucleotide sugar epimerase signature 185 200 9.4E-6 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK01_RS03955 8d4c7c69a74336a66c918871b2f0dc4e 281 PRINTS PR01713 Nucleotide sugar epimerase signature 207 222 9.4E-6 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK01_RS03955 8d4c7c69a74336a66c918871b2f0dc4e 281 SUPERFAMILY SSF51735 4 278 7.48E-70 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03955 8d4c7c69a74336a66c918871b2f0dc4e 281 Gene3D G3DSA:3.90.25.10 165 278 1.7E-28 T 14-09-2016 AMK01_RS03955 8d4c7c69a74336a66c918871b2f0dc4e 281 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 213 2.1E-44 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS03955 8d4c7c69a74336a66c918871b2f0dc4e 281 PANTHER PTHR10366 4 280 1.0E-57 T 14-09-2016 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 SUPERFAMILY SSF56235 46 473 1.63E-157 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 Gene3D G3DSA:3.20.20.70 897 1260 1.7E-180 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 PANTHER PTHR11938:SF1 35 1485 0.0 T 14-09-2016 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 Gene3D G3DSA:3.20.20.70 487 835 2.2E-115 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 PANTHER PTHR11938:SF1 1514 1565 0.0 T 14-09-2016 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 SUPERFAMILY SSF51395 492 1263 6.11E-267 T 14-09-2016 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 Gene3D G3DSA:2.160.20.60 1274 1565 5.2E-108 T 14-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 Pfam PF00310 Glutamine amidotransferases class-II 46 470 9.5E-188 T 14-09-2016 IPR017932 Glutamine amidotransferase type 2 domain AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 Pfam PF04898 Glutamate synthase central domain 498 785 1.9E-118 T 14-09-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 SUPERFAMILY SSF69336 1269 1485 7.19E-94 T 14-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 SUPERFAMILY SSF69336 1514 1563 7.19E-94 T 14-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 Pfam PF01493 GXGXG motif 1301 1486 1.2E-82 T 14-09-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 PANTHER PTHR11938 35 1485 0.0 T 14-09-2016 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 PANTHER PTHR11938 1514 1565 0.0 T 14-09-2016 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 Pfam PF01645 Conserved region in glutamate synthase 848 1220 4.6E-155 T 14-09-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMK01_RS18395 320e577f48636b2885dada0cf530a962 1573 Gene3D G3DSA:3.60.20.10 46 481 5.6E-187 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 PRINTS PR00148 Enolase signature 37 51 1.9E-48 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 PRINTS PR00148 Enolase signature 106 122 1.9E-48 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 PRINTS PR00148 Enolase signature 362 379 1.9E-48 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 PRINTS PR00148 Enolase signature 310 321 1.9E-48 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 PRINTS PR00148 Enolase signature 160 173 1.9E-48 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 PRINTS PR00148 Enolase signature 333 347 1.9E-48 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 PIRSF PIRSF001400 1 424 3.5E-187 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 Gene3D G3DSA:3.30.390.10 4 125 1.3E-55 T 14-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 Gene3D G3DSA:3.20.20.120 127 423 1.3E-130 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 PANTHER PTHR11902 1 420 1.1E-249 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 Pfam PF03952 Enolase, N-terminal domain 4 133 7.1E-60 T 14-09-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 423 6.8E-131 T 14-09-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 SMART SM01192 138 424 7.1E-216 T 14-09-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 2.2E-204 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 ProSitePatterns PS00164 Enolase signature. 333 346 - T 14-09-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 SUPERFAMILY SSF51604 139 421 1.02E-124 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 Hamap MF_00318 Enolase [eno]. 2 410 44.253 T 14-09-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 SUPERFAMILY SSF54826 4 135 1.33E-55 T 14-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK01_RS09785 4f8c37c2f9dd06b0a6e78147564f7aea 424 SMART SM01193 4 133 1.3E-95 T 14-09-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK01_RS20295 2f0ec97a7f52a465b83e14342d4b30ab 195 Hamap MF_01514 UPF0314 protein . 1 194 41.608 T 14-09-2016 IPR019691 Protein of unknown function DUF2585 GO:0005886 AMK01_RS20295 2f0ec97a7f52a465b83e14342d4b30ab 195 Pfam PF10755 Protein of unknown function (DUF2585) 32 194 3.8E-86 T 14-09-2016 IPR019691 Protein of unknown function DUF2585 GO:0005886 AMK01_RS19125 95e538dcffbd80f5a432207ab7fb1985 394 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 67 291 3.0E-35 T 14-09-2016 IPR008775 Phytanoyl-CoA dioxygenase AMK01_RS19125 95e538dcffbd80f5a432207ab7fb1985 394 PANTHER PTHR21308:SF1 6 376 1.3E-71 T 14-09-2016 AMK01_RS19125 95e538dcffbd80f5a432207ab7fb1985 394 PANTHER PTHR21308 6 376 1.3E-71 T 14-09-2016 AMK01_RS19125 95e538dcffbd80f5a432207ab7fb1985 394 Gene3D G3DSA:2.60.120.620 82 295 5.0E-15 T 14-09-2016 AMK01_RS19125 95e538dcffbd80f5a432207ab7fb1985 394 SUPERFAMILY SSF51197 82 361 3.39E-45 T 14-09-2016 AMK01_RS00865 267f8b1c84d417516cc4409ee31cc3e9 121 PANTHER PTHR10245:SF38 2 70 2.0E-26 T 14-09-2016 AMK01_RS00865 267f8b1c84d417516cc4409ee31cc3e9 121 SUPERFAMILY SSF47413 2 71 4.29E-22 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00865 267f8b1c84d417516cc4409ee31cc3e9 121 Pfam PF12844 Helix-turn-helix domain 10 72 9.7E-10 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS00865 267f8b1c84d417516cc4409ee31cc3e9 121 Gene3D G3DSA:1.10.260.40 9 72 6.3E-17 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00865 267f8b1c84d417516cc4409ee31cc3e9 121 PANTHER PTHR10245 2 70 2.0E-26 T 14-09-2016 AMK01_RS00865 267f8b1c84d417516cc4409ee31cc3e9 121 SMART SM00530 12 67 2.3E-10 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS06730 1350e8a4e119dd70018f0e5dd9c1249c 499 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 55 216 6.2E-23 T 14-09-2016 AMK01_RS19345 1f268352842819dcf71fe9b0e43cdc31 258 PANTHER PTHR11907 8 256 7.7E-50 T 14-09-2016 AMK01_RS19345 1f268352842819dcf71fe9b0e43cdc31 258 PANTHER PTHR11907:SF9 8 256 7.7E-50 T 14-09-2016 AMK01_RS19345 1f268352842819dcf71fe9b0e43cdc31 258 SUPERFAMILY SSF53271 83 252 6.95E-30 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS19345 1f268352842819dcf71fe9b0e43cdc31 258 Pfam PF00156 Phosphoribosyl transferase domain 207 251 5.9E-7 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK01_RS19345 1f268352842819dcf71fe9b0e43cdc31 258 Gene3D G3DSA:3.40.50.2020 95 252 4.7E-29 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS17080 657cf947d2ed2d616537ffd115da0968 242 SMART SM00382 31 218 3.3E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17080 657cf947d2ed2d616537ffd115da0968 242 PANTHER PTHR24220:SF568 8 242 2.2E-129 T 14-09-2016 AMK01_RS17080 657cf947d2ed2d616537ffd115da0968 242 Gene3D G3DSA:3.40.50.300 3 236 1.2E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17080 657cf947d2ed2d616537ffd115da0968 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS17080 657cf947d2ed2d616537ffd115da0968 242 SUPERFAMILY SSF52540 5 237 1.09E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17080 657cf947d2ed2d616537ffd115da0968 242 PIRSF PIRSF039137 2 240 1.3E-103 T 14-09-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AMK01_RS17080 657cf947d2ed2d616537ffd115da0968 242 Pfam PF00005 ABC transporter 23 166 2.2E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17080 657cf947d2ed2d616537ffd115da0968 242 PANTHER PTHR24220 8 242 2.2E-129 T 14-09-2016 AMK01_RS00985 517dbb3bb8f7be8fc9f8d58dbd270622 202 PIRSF PIRSF020680 3 202 1.5E-64 T 14-09-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AMK01_RS00985 517dbb3bb8f7be8fc9f8d58dbd270622 202 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 11 196 6.3E-60 T 14-09-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AMK01_RS00985 517dbb3bb8f7be8fc9f8d58dbd270622 202 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 11 197 5.9E-63 T 14-09-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AMK01_RS00985 517dbb3bb8f7be8fc9f8d58dbd270622 202 SUPERFAMILY SSF159709 18 198 1.44E-59 T 14-09-2016 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 SUPERFAMILY SSF55031 212 322 4.49E-22 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 11 409 2.4E-100 T 14-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 PIRSF PIRSF001235 6 416 5.7E-124 T 14-09-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 Pfam PF07687 Peptidase dimerisation domain 209 314 2.1E-6 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 PANTHER PTHR32494 1 419 7.0E-130 T 14-09-2016 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 Pfam PF01546 Peptidase family M20/M25/M40 79 409 8.9E-33 T 14-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 Gene3D G3DSA:3.30.70.360 225 322 5.9E-32 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 SUPERFAMILY SSF53187 339 412 1.03E-84 T 14-09-2016 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 SUPERFAMILY SSF53187 4 222 1.03E-84 T 14-09-2016 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 Gene3D G3DSA:3.40.630.10 3 224 6.0E-100 T 14-09-2016 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 Gene3D G3DSA:3.40.630.10 354 413 6.0E-100 T 14-09-2016 AMK01_RS01925 4a608105e8be335c158e71f90bde90f1 426 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 78 87 - T 14-09-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 PANTHER PTHR24220:SF308 11 383 4.1E-145 T 14-09-2016 AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 SUPERFAMILY SSF52540 277 487 8.19E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 Gene3D G3DSA:3.40.50.300 276 490 1.9E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 Gene3D G3DSA:3.40.50.300 7 225 4.0E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 SMART SM00382 283 493 1.1E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 SMART SM00382 34 230 8.8E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 PANTHER PTHR24220 11 383 4.1E-145 T 14-09-2016 AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 SUPERFAMILY SSF52540 8 230 2.5E-54 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 Pfam PF00005 ABC transporter 25 174 2.5E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS03255 3624a1d81d26e90a8641449131622a56 506 Pfam PF00005 ABC transporter 277 428 1.5E-18 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 Gene3D G3DSA:3.10.20.70 18 114 3.2E-4 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 249 264 - T 14-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 SUPERFAMILY SSF54368 17 110 6.93E-7 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 PANTHER PTHR20852 15 449 7.6E-78 T 14-09-2016 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 SUPERFAMILY SSF55931 113 446 2.75E-84 T 14-09-2016 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 PANTHER PTHR20852:SF7 15 449 7.6E-78 T 14-09-2016 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 Pfam PF00120 Glutamine synthetase, catalytic domain 112 445 6.6E-81 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 Gene3D G3DSA:3.30.590.10 115 431 1.6E-74 T 14-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK01_RS06715 164665e0532a6fd93fc06093a6ea1697 449 SMART SM01230 111 367 1.1E-83 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS01920 5865e19e733c721346016853e0ca0bd3 365 Gene3D G3DSA:2.40.390.10 225 346 4.6E-27 T 14-09-2016 IPR024071 Protein of unknown function DUF917, C-terminal AMK01_RS01920 5865e19e733c721346016853e0ca0bd3 365 SUPERFAMILY SSF160991 3 357 1.16E-78 T 14-09-2016 AMK01_RS01920 5865e19e733c721346016853e0ca0bd3 365 Gene3D G3DSA:3.40.1610.10 3 223 1.3E-23 T 14-09-2016 IPR027479 Protein of unknown function DUF917, N-terminal AMK01_RS01920 5865e19e733c721346016853e0ca0bd3 365 Pfam PF06032 Protein of unknown function (DUF917) 8 331 5.5E-57 T 14-09-2016 IPR010318 Protein of unknown function DUF917 AMK01_RS20685 cc5cb529882e6bfaa956ee003c04ee36 175 PANTHER PTHR33164 1 172 2.0E-16 T 14-09-2016 AMK01_RS20685 cc5cb529882e6bfaa956ee003c04ee36 175 SMART SM00347 45 148 4.3E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS20685 cc5cb529882e6bfaa956ee003c04ee36 175 SUPERFAMILY SSF46785 25 161 4.77E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20685 cc5cb529882e6bfaa956ee003c04ee36 175 Gene3D G3DSA:1.10.10.10 35 159 1.6E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20685 cc5cb529882e6bfaa956ee003c04ee36 175 Pfam PF12802 MarR family 51 112 5.5E-13 T 14-09-2016 AMK01_RS13285 16be76fca29a13a74a4bcac8d4cdfd72 332 PANTHER PTHR30503 8 314 3.5E-74 T 14-09-2016 AMK01_RS13285 16be76fca29a13a74a4bcac8d4cdfd72 332 PIRSF PIRSF016660 1 319 4.6E-105 T 14-09-2016 IPR008526 Inner membrane protein YedI AMK01_RS13285 16be76fca29a13a74a4bcac8d4cdfd72 332 Pfam PF05661 Protein of unknown function (DUF808) 4 308 8.3E-119 T 14-09-2016 IPR008526 Inner membrane protein YedI AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 Gene3D G3DSA:3.40.190.10 184 326 1.4E-19 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 PANTHER PTHR30222:SF8 155 431 2.1E-170 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 PANTHER PTHR30222:SF8 8 133 2.1E-170 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 Pfam PF13416 Bacterial extracellular solute-binding protein 63 341 2.5E-21 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 PANTHER PTHR30222 155 431 2.1E-170 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 PANTHER PTHR30222 8 133 2.1E-170 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 SUPERFAMILY SSF53850 49 143 2.77E-50 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 SUPERFAMILY SSF53850 173 430 2.77E-50 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 Gene3D G3DSA:3.40.190.10 49 148 7.8E-30 T 14-09-2016 AMK01_RS14935 097dff99f25671ff13503686b5c4651d 432 Gene3D G3DSA:3.40.190.10 327 372 7.8E-30 T 14-09-2016 AMK01_RS14755 9978103a42ef9d6956cd97234b8cca8f 246 Gene3D G3DSA:3.90.730.10 31 233 1.2E-33 T 14-09-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMK01_RS14755 9978103a42ef9d6956cd97234b8cca8f 246 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 65 72 - T 14-09-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 AMK01_RS14755 9978103a42ef9d6956cd97234b8cca8f 246 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 120 131 - T 14-09-2016 IPR033130 Ribonuclease T2, His active site 2 AMK01_RS14755 9978103a42ef9d6956cd97234b8cca8f 246 Pfam PF00445 Ribonuclease T2 family 32 208 2.3E-20 T 14-09-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMK01_RS14755 9978103a42ef9d6956cd97234b8cca8f 246 SUPERFAMILY SSF55895 30 212 1.18E-27 T 14-09-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 AMK01_RS06055 3d0c090e6e1376d2d260ff522a4575df 242 Pfam PF05988 Bacterial protein of unknown function (DUF899) 3 231 1.1E-93 T 14-09-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like AMK01_RS06055 3d0c090e6e1376d2d260ff522a4575df 242 Gene3D G3DSA:3.40.30.10 79 205 3.1E-6 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06055 3d0c090e6e1376d2d260ff522a4575df 242 SUPERFAMILY SSF52833 38 153 1.86E-10 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS09265 918fe0df4175f7894b37703fa897d61b 128 SUPERFAMILY SSF64076 5 127 1.7E-39 T 14-09-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein AMK01_RS09265 918fe0df4175f7894b37703fa897d61b 128 Gene3D G3DSA:3.40.1230.10 3 127 1.5E-40 T 14-09-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein AMK01_RS09265 918fe0df4175f7894b37703fa897d61b 128 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 18 126 1.0E-29 T 14-09-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein AMK01_RS09265 918fe0df4175f7894b37703fa897d61b 128 PANTHER PTHR21192:SF3 11 126 4.5E-33 T 14-09-2016 AMK01_RS09265 918fe0df4175f7894b37703fa897d61b 128 PANTHER PTHR21192 11 126 4.5E-33 T 14-09-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein AMK01_RS03525 8cba0bb595c6a882a9f0f5ee040b8dc9 168 Pfam PF03748 Flagellar basal body-associated protein FliL 79 167 4.9E-10 T 14-09-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 SUPERFAMILY SSF88946 17 81 1.92E-10 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 Gene3D G3DSA:1.10.10.10 105 157 8.0E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 Pfam PF04542 Sigma-70 region 2 17 79 1.3E-8 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 PANTHER PTHR30173:SF6 16 154 4.9E-17 T 14-09-2016 AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 PANTHER PTHR30173 16 154 4.9E-17 T 14-09-2016 AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 SUPERFAMILY SSF88659 105 158 1.55E-9 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 154 8.3E-15 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 Pfam PF08281 Sigma-70, region 4 106 156 1.7E-12 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15610 1e764f6a266074e452c2650e4abf0a6b 169 Gene3D G3DSA:1.10.1740.10 17 79 3.4E-12 T 14-09-2016 AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 PANTHER PTHR24220:SF516 5 376 6.5E-149 T 14-09-2016 AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 PANTHER PTHR24220 5 376 6.5E-149 T 14-09-2016 AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 SUPERFAMILY SSF52540 3 222 1.25E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 SMART SM00382 277 472 5.1E-5 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 SMART SM00382 28 215 3.3E-6 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 Gene3D G3DSA:3.40.50.300 269 478 2.2E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 Pfam PF00005 ABC transporter 19 168 2.2E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 Pfam PF00005 ABC transporter 271 423 2.8E-15 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 SUPERFAMILY SSF52540 249 475 1.17E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19085 128482b0c2ea2fcd05811188d9261ded 501 Gene3D G3DSA:3.40.50.300 3 222 6.1E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03590 7108dfc3139904df7b3e0f2275213f88 194 SUPERFAMILY SSF53955 103 177 3.13E-21 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS03590 7108dfc3139904df7b3e0f2275213f88 194 SUPERFAMILY SSF53955 36 76 3.13E-21 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS03590 7108dfc3139904df7b3e0f2275213f88 194 Pfam PF01464 Transglycosylase SLT domain 39 169 4.4E-9 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AMK01_RS03590 7108dfc3139904df7b3e0f2275213f88 194 Gene3D G3DSA:1.10.530.10 37 176 1.8E-20 T 14-09-2016 AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 ProSitePatterns PS00211 ABC transporters family signature. 511 525 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 Gene3D G3DSA:3.40.50.300 373 604 5.2E-83 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 Pfam PF00005 ABC transporter 390 539 9.0E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 SUPERFAMILY SSF90123 39 361 3.53E-64 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 Gene3D G3DSA:1.20.1560.10 38 355 7.2E-61 T 14-09-2016 AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 Pfam PF00664 ABC transporter transmembrane region 55 326 3.5E-41 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 SMART SM00382 399 585 1.3E-19 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 SUPERFAMILY SSF52540 362 609 8.47E-94 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12115 16215e87393e33ebcb4c949ef9e58945 612 PANTHER PTHR24221 30 611 4.6E-218 T 14-09-2016 AMK01_RS15440 d4e4a4d6c79df17455e301c1b9cdbbd5 243 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-09-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMK01_RS15440 d4e4a4d6c79df17455e301c1b9cdbbd5 243 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 14-09-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMK01_RS15440 d4e4a4d6c79df17455e301c1b9cdbbd5 243 PANTHER PTHR17224 1 194 2.6E-71 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK01_RS15440 d4e4a4d6c79df17455e301c1b9cdbbd5 243 SUPERFAMILY SSF53178 1 183 5.62E-66 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK01_RS15440 d4e4a4d6c79df17455e301c1b9cdbbd5 243 Pfam PF01195 Peptidyl-tRNA hydrolase 3 182 5.1E-52 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK01_RS15440 d4e4a4d6c79df17455e301c1b9cdbbd5 243 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 182 2.1E-55 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK01_RS15440 d4e4a4d6c79df17455e301c1b9cdbbd5 243 Gene3D G3DSA:3.40.50.1470 1 183 1.2E-67 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK01_RS15440 d4e4a4d6c79df17455e301c1b9cdbbd5 243 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 34.59 T 14-09-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK01_RS09705 2a3e90a6f5e7b31b6843a83c9e875a25 240 Gene3D G3DSA:3.40.1160.10 2 238 1.9E-79 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS09705 2a3e90a6f5e7b31b6843a83c9e875a25 240 Pfam PF00696 Amino acid kinase family 8 217 4.3E-30 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS09705 2a3e90a6f5e7b31b6843a83c9e875a25 240 SUPERFAMILY SSF53633 5 237 2.09E-67 T 14-09-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK01_RS09705 2a3e90a6f5e7b31b6843a83c9e875a25 240 PANTHER PTHR21499 2 240 1.4E-93 T 14-09-2016 AMK01_RS09705 2a3e90a6f5e7b31b6843a83c9e875a25 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 238 41.272 T 14-09-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK01_RS09705 2a3e90a6f5e7b31b6843a83c9e875a25 240 PIRSF PIRSF005650 3 240 1.5E-86 T 14-09-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK01_RS09705 2a3e90a6f5e7b31b6843a83c9e875a25 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 7 237 3.8E-93 T 14-09-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK01_RS09705 2a3e90a6f5e7b31b6843a83c9e875a25 240 PANTHER PTHR21499:SF23 2 240 1.4E-93 T 14-09-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK01_RS12425 3ec6443808b24b1c3ebecbfedf8cbd0b 63 PANTHER PTHR30011:SF1 1 63 9.3E-20 T 14-09-2016 AMK01_RS12425 3ec6443808b24b1c3ebecbfedf8cbd0b 63 Gene3D G3DSA:3.20.20.30 1 41 8.5E-6 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS12425 3ec6443808b24b1c3ebecbfedf8cbd0b 63 PANTHER PTHR30011 1 63 9.3E-20 T 14-09-2016 AMK01_RS12425 3ec6443808b24b1c3ebecbfedf8cbd0b 63 Pfam PF00296 Luciferase-like monooxygenase 1 60 6.8E-5 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS06850 82863352c13de14e4022150d77cfeed1 305 PANTHER PTHR12110 6 305 6.7E-67 T 14-09-2016 AMK01_RS06850 82863352c13de14e4022150d77cfeed1 305 Gene3D G3DSA:3.20.20.150 1 288 1.5E-66 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS06850 82863352c13de14e4022150d77cfeed1 305 Pfam PF01261 Xylose isomerase-like TIM barrel 31 223 1.2E-18 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS06850 82863352c13de14e4022150d77cfeed1 305 PANTHER PTHR12110:SF4 6 305 6.7E-67 T 14-09-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 AMK01_RS06850 82863352c13de14e4022150d77cfeed1 305 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 3 289 1.2E-111 T 14-09-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 AMK01_RS06850 82863352c13de14e4022150d77cfeed1 305 SUPERFAMILY SSF51658 4 280 1.38E-49 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 Gene3D G3DSA:3.40.50.720 3 267 2.6E-42 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PANTHER PTHR24322:SF211 49 155 1.4E-56 T 14-09-2016 AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PANTHER PTHR24322 174 206 1.4E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 Pfam PF00106 short chain dehydrogenase 8 212 3.6E-19 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PANTHER PTHR24322:SF211 174 206 1.4E-56 T 14-09-2016 AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PANTHER PTHR24322:SF211 12 31 1.4E-56 T 14-09-2016 AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 1.6E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.6E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 1.6E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 1.6E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PANTHER PTHR24322 49 155 1.4E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 PANTHER PTHR24322 12 31 1.4E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06490 fc2ecf24d504a2b1a41d90caaaf4e49c 304 SUPERFAMILY SSF51735 4 264 2.39E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 Gene3D G3DSA:3.90.230.10 3 247 1.5E-61 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 246 9.1E-72 T 14-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 SUPERFAMILY SSF55920 2 248 3.14E-61 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 4.7E-17 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 4.7E-17 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 4.7E-17 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 4.7E-17 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 Pfam PF00557 Metallopeptidase family M24 11 238 4.2E-38 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 PANTHER PTHR10804:SF41 1 246 5.7E-76 T 14-09-2016 AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 31.304 T 14-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK01_RS15855 9dc88e95128f11dcf3d486211bedac97 252 PANTHER PTHR10804 1 246 5.7E-76 T 14-09-2016 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 SMART SM00382 113 266 5.6E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 SUPERFAMILY SSF52540 66 400 8.45E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 53.871 T 14-09-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 SUPERFAMILY SSF57716 16 51 1.2E-11 T 14-09-2016 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 310 2.2E-49 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 Gene3D G3DSA:3.40.50.300 294 310 1.9E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 Gene3D G3DSA:3.40.50.300 68 255 1.9E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 Gene3D G3DSA:1.10.8.60 317 417 3.5E-38 T 14-09-2016 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 389 2.2E-16 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 Pfam PF06689 ClpX C4-type zinc finger 16 53 2.7E-20 T 14-09-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 SMART SM00994 15 54 1.7E-24 T 14-09-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 PANTHER PTHR11262 5 414 9.2E-253 T 14-09-2016 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 13 409 1.8E-201 T 14-09-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMK01_RS08025 bf1e220ad27a3735017529864cb320a9 425 SMART SM01086 317 412 2.1E-33 T 14-09-2016 IPR019489 Clp ATPase, C-terminal AMK01_RS12250 fda0a605e4456e3ce08f23c8f612921b 269 Gene3D G3DSA:3.40.50.970 2 266 1.0E-88 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS12250 fda0a605e4456e3ce08f23c8f612921b 269 SUPERFAMILY SSF52518 3 265 3.85E-77 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS12250 fda0a605e4456e3ce08f23c8f612921b 269 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 249 1.5E-45 T 14-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS12250 fda0a605e4456e3ce08f23c8f612921b 269 PANTHER PTHR11624 2 267 3.5E-90 T 14-09-2016 IPR033247 Transketolase family AMK01_RS12250 fda0a605e4456e3ce08f23c8f612921b 269 PANTHER PTHR11624:SF86 2 267 3.5E-90 T 14-09-2016 AMK01_RS12255 7ac46250cde32fa12c54cb23ae75b971 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 316 3.0E-50 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS12255 7ac46250cde32fa12c54cb23ae75b971 326 PANTHER PTHR32196:SF21 25 325 2.4E-97 T 14-09-2016 AMK01_RS12255 7ac46250cde32fa12c54cb23ae75b971 326 PANTHER PTHR32196 25 325 2.4E-97 T 14-09-2016 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 Gene3D G3DSA:1.10.10.10 6 87 1.0E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 SUPERFAMILY SSF53850 83 289 1.07E-35 T 14-09-2016 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 Gene3D G3DSA:3.40.190.10 179 258 2.0E-16 T 14-09-2016 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 PANTHER PTHR30537:SF26 1 291 1.9E-104 T 14-09-2016 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 PANTHER PTHR30537 1 291 1.9E-104 T 14-09-2016 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.6E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.6E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.6E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 Pfam PF03466 LysR substrate binding domain 94 285 4.7E-37 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 SUPERFAMILY SSF46785 3 87 8.17E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 Gene3D G3DSA:3.40.190.10 98 178 1.7E-28 T 14-09-2016 AMK01_RS16485 14eb4c1c28b1af21b98f22553fbd6993 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.9E-19 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 SMART SM00388 139 205 1.7E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 Pfam PF00072 Response regulator receiver domain 388 509 7.6E-19 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 Pfam PF00072 Response regulator receiver domain 7 118 2.4E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 SMART SM00448 386 509 4.9E-25 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 SMART SM00448 5 119 1.4E-20 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 313 1.4E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 299 1.4E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 1.4E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 1.4E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 204 2.0E-7 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 Gene3D G3DSA:1.10.287.130 136 200 6.2E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 356 1.8E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 SUPERFAMILY SSF52172 5 161 1.85E-29 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 PANTHER PTHR24423 132 512 5.7E-91 T 14-09-2016 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 SMART SM00387 247 357 6.4E-38 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 Gene3D G3DSA:3.40.50.2300 5 135 1.6E-29 T 14-09-2016 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 SUPERFAMILY SSF52172 388 513 6.97E-29 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 SUPERFAMILY SSF55874 212 355 5.24E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 Gene3D G3DSA:3.40.50.2300 386 512 8.2E-32 T 14-09-2016 AMK01_RS03315 cbbbdccfe61508ad6994035f9eab0b0a 531 Gene3D G3DSA:3.30.565.10 210 361 8.8E-42 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS17505 ea88c449d5eb1b8a20dc20962508eba7 167 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 38 143 1.5E-23 T 14-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMK01_RS17505 ea88c449d5eb1b8a20dc20962508eba7 167 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 2 151 43.116 T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK01_RS17505 ea88c449d5eb1b8a20dc20962508eba7 167 Gene3D G3DSA:3.40.50.700 23 150 4.3E-34 T 14-09-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 AMK01_RS17505 ea88c449d5eb1b8a20dc20962508eba7 167 SUPERFAMILY SSF56770 11 154 4.06E-65 T 14-09-2016 AMK01_RS17505 ea88c449d5eb1b8a20dc20962508eba7 167 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 12 152 5.4E-73 T 14-09-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 AMK01_RS17505 ea88c449d5eb1b8a20dc20962508eba7 167 PANTHER PTHR11995 9 157 4.0E-84 T 14-09-2016 AMK01_RS02565 fde7a1fb42107c71a80b8d37cfa8d44b 308 Pfam PF00294 pfkB family carbohydrate kinase 2 301 1.3E-45 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AMK01_RS02565 fde7a1fb42107c71a80b8d37cfa8d44b 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK01_RS02565 fde7a1fb42107c71a80b8d37cfa8d44b 308 SUPERFAMILY SSF53613 2 302 1.01E-63 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS02565 fde7a1fb42107c71a80b8d37cfa8d44b 308 Gene3D G3DSA:3.40.1190.20 2 306 3.7E-66 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS02565 fde7a1fb42107c71a80b8d37cfa8d44b 308 PANTHER PTHR10584:SF161 1 305 4.8E-67 T 14-09-2016 AMK01_RS02565 fde7a1fb42107c71a80b8d37cfa8d44b 308 PANTHER PTHR10584 1 305 4.8E-67 T 14-09-2016 AMK01_RS07510 dd689e192508993780e01a59f7b7ae71 181 PANTHER PTHR35525:SF3 9 180 1.1E-15 T 14-09-2016 AMK01_RS07510 dd689e192508993780e01a59f7b7ae71 181 SUPERFAMILY SSF160904 4 175 8.63E-35 T 14-09-2016 AMK01_RS07510 dd689e192508993780e01a59f7b7ae71 181 Pfam PF11706 CGNR zinc finger 135 176 2.7E-16 T 14-09-2016 IPR021005 Zinc finger, CGNR AMK01_RS07510 dd689e192508993780e01a59f7b7ae71 181 PANTHER PTHR35525 9 180 1.1E-15 T 14-09-2016 AMK01_RS07510 dd689e192508993780e01a59f7b7ae71 181 Gene3D G3DSA:1.10.3300.10 4 178 1.0E-32 T 14-09-2016 IPR023286 ABATE domain AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 SUPERFAMILY SSF47729 3 91 8.54E-29 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 Gene3D G3DSA:4.10.520.10 3 96 5.3E-31 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 PANTHER PTHR33175:SF5 1 91 9.8E-40 T 14-09-2016 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 PANTHER PTHR33175 1 91 9.8E-40 T 14-09-2016 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.3E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.3E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.3E-16 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.741 T 14-09-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.9E-29 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 2 92 1.9E-40 T 14-09-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AMK01_RS02195 8a4a0f5ceda3932fee63b68920f60cd4 99 SMART SM00411 1 91 1.6E-38 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS14410 4d3446d2743bda387fc513bada97bc5c 364 PIRSF PIRSF038991 6 361 1.0E-71 T 14-09-2016 IPR007820 AbrB family GO:0010468|GO:0016021 AMK01_RS14410 4d3446d2743bda387fc513bada97bc5c 364 Pfam PF05145 Putative ammonia monooxygenase 41 353 2.1E-93 T 14-09-2016 IPR007820 AbrB family GO:0010468|GO:0016021 AMK01_RS14410 4d3446d2743bda387fc513bada97bc5c 364 PANTHER PTHR38457 10 363 1.8E-57 T 14-09-2016 AMK01_RS14410 4d3446d2743bda387fc513bada97bc5c 364 PANTHER PTHR38457:SF1 10 363 1.8E-57 T 14-09-2016 AMK01_RS14410 4d3446d2743bda387fc513bada97bc5c 364 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 197 353 5.6E-41 T 14-09-2016 IPR017516 AbrB duplication AMK01_RS14410 4d3446d2743bda387fc513bada97bc5c 364 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 18 175 8.8E-36 T 14-09-2016 IPR017516 AbrB duplication AMK01_RS20650 f0c802b9473d4aee201dfbedcd466cb2 1060 Gene3D G3DSA:3.40.50.300 170 296 1.1E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20650 f0c802b9473d4aee201dfbedcd466cb2 1060 Gene3D G3DSA:3.40.50.300 15 137 1.9E-4 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20650 f0c802b9473d4aee201dfbedcd466cb2 1060 SMART SM00490 185 274 1.6E-10 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS20650 f0c802b9473d4aee201dfbedcd466cb2 1060 PANTHER PTHR12131:SF4 19 297 1.1E-110 T 14-09-2016 AMK01_RS20650 f0c802b9473d4aee201dfbedcd466cb2 1060 SUPERFAMILY SSF52540 143 401 2.13E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20650 f0c802b9473d4aee201dfbedcd466cb2 1060 PANTHER PTHR12131 19 297 1.1E-110 T 14-09-2016 AMK01_RS20650 f0c802b9473d4aee201dfbedcd466cb2 1060 SUPERFAMILY SSF52540 7 129 1.42E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20650 f0c802b9473d4aee201dfbedcd466cb2 1060 Pfam PF00271 Helicase conserved C-terminal domain 171 273 6.9E-8 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS16015 e70c0c20f572a739980305b0f5653a8d 242 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 118 238 2.2E-37 T 14-09-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AMK01_RS16015 e70c0c20f572a739980305b0f5653a8d 242 Gene3D G3DSA:3.40.50.150 18 240 2.1E-74 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS09385 68ff77bee5ad01e1e72a58635a07861b 164 Gene3D G3DSA:3.40.630.30 5 163 5.2E-28 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09385 68ff77bee5ad01e1e72a58635a07861b 164 SUPERFAMILY SSF55729 5 156 1.15E-25 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09385 68ff77bee5ad01e1e72a58635a07861b 164 Pfam PF00583 Acetyltransferase (GNAT) family 65 138 1.8E-16 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS09385 68ff77bee5ad01e1e72a58635a07861b 164 PANTHER PTHR23091 5 140 5.1E-16 T 14-09-2016 AMK01_RS19870 61a2be19d90cb8bff284103e71c4dcef 270 Gene3D G3DSA:3.40.50.300 3 207 4.8E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19870 61a2be19d90cb8bff284103e71c4dcef 270 PANTHER PTHR24220:SF14 7 227 1.9E-99 T 14-09-2016 AMK01_RS19870 61a2be19d90cb8bff284103e71c4dcef 270 SUPERFAMILY SSF52540 5 227 2.6E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19870 61a2be19d90cb8bff284103e71c4dcef 270 PANTHER PTHR24220 7 227 1.9E-99 T 14-09-2016 AMK01_RS19870 61a2be19d90cb8bff284103e71c4dcef 270 SMART SM00382 30 209 1.3E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19870 61a2be19d90cb8bff284103e71c4dcef 270 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS19870 61a2be19d90cb8bff284103e71c4dcef 270 Pfam PF00005 ABC transporter 21 160 1.9E-26 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 Gene3D G3DSA:1.10.10.10 6 89 1.7E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 SUPERFAMILY SSF53850 91 289 2.17E-24 T 14-09-2016 AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 PANTHER PTHR30579 1 281 1.1E-58 T 14-09-2016 AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 SUPERFAMILY SSF46785 4 114 3.99E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 Gene3D G3DSA:3.40.190.10 190 241 5.4E-4 T 14-09-2016 AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 7.1E-17 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 Pfam PF03466 LysR substrate binding domain 91 281 1.1E-25 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 PANTHER PTHR30579:SF0 1 281 1.1E-58 T 14-09-2016 AMK01_RS18260 2db26c64b22758f56c1d1b36be0920db 298 Gene3D G3DSA:3.40.190.10 92 189 1.1E-19 T 14-09-2016 AMK01_RS03090 3ea462637178341c5800322383b2463e 157 Hamap MF_00678 UPF0262 protein . 5 156 40.988 T 14-09-2016 IPR008321 Uncharacterised conserved protein UCP032146 AMK01_RS03090 3ea462637178341c5800322383b2463e 157 PIRSF PIRSF032146 1 157 1.1E-84 T 14-09-2016 IPR008321 Uncharacterised conserved protein UCP032146 AMK01_RS03090 3ea462637178341c5800322383b2463e 157 Pfam PF06793 Uncharacterised protein family (UPF0262) 7 156 4.4E-72 T 14-09-2016 IPR008321 Uncharacterised conserved protein UCP032146 AMK01_RS11530 3990087769333d12c8c4016f5c998638 251 PANTHER PTHR24220:SF85 3 243 6.8E-118 T 14-09-2016 AMK01_RS11530 3990087769333d12c8c4016f5c998638 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS11530 3990087769333d12c8c4016f5c998638 251 PANTHER PTHR24220 3 243 6.8E-118 T 14-09-2016 AMK01_RS11530 3990087769333d12c8c4016f5c998638 251 Gene3D G3DSA:3.40.50.300 1 232 1.4E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11530 3990087769333d12c8c4016f5c998638 251 SMART SM00382 28 225 1.2E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS11530 3990087769333d12c8c4016f5c998638 251 SUPERFAMILY SSF52540 1 231 2.48E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11530 3990087769333d12c8c4016f5c998638 251 Pfam PF00005 ABC transporter 20 174 7.7E-22 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS11530 3990087769333d12c8c4016f5c998638 251 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 245 3.5E-105 T 14-09-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 459 1.9E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 SMART SM00387 353 462 1.6E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 SMART SM00388 242 308 3.4E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 SMART SM00304 188 241 2.2E-5 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 SUPERFAMILY SSF55874 299 462 2.1E-36 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 PANTHER PTHR24423 182 463 4.0E-59 T 14-09-2016 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 PANTHER PTHR24423 17 23 4.0E-59 T 14-09-2016 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 SUPERFAMILY SSF158472 193 240 8.11E-5 T 14-09-2016 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 Gene3D G3DSA:1.10.287.130 233 303 1.2E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 9.1E-8 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 9.1E-8 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 9.1E-8 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 Gene3D G3DSA:3.30.565.10 312 462 2.5E-36 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 308 2.3E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS05325 7a41ebe456ad33ef189c8d878d76d058 465 SUPERFAMILY SSF47384 226 308 1.02E-13 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS16615 4a5855c765af41485cc62c215f939a9e 294 Gene3D G3DSA:3.90.550.10 2 209 7.9E-43 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16615 4a5855c765af41485cc62c215f939a9e 294 SUPERFAMILY SSF53448 2 217 6.03E-48 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16615 4a5855c765af41485cc62c215f939a9e 294 PANTHER PTHR22916 1 205 3.7E-41 T 14-09-2016 AMK01_RS16615 4a5855c765af41485cc62c215f939a9e 294 PANTHER PTHR22916:SF23 1 205 3.7E-41 T 14-09-2016 AMK01_RS16615 4a5855c765af41485cc62c215f939a9e 294 Pfam PF00535 Glycosyl transferase family 2 4 161 2.8E-32 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS17985 57ef81e0de9d0c3e9b92589ea720fb85 460 SUPERFAMILY SSF53474 39 164 3.59E-8 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS17985 57ef81e0de9d0c3e9b92589ea720fb85 460 Gene3D G3DSA:3.40.50.1820 277 459 5.8E-10 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS17985 57ef81e0de9d0c3e9b92589ea720fb85 460 PIRSF PIRSF029063 1 460 6.8E-168 T 14-09-2016 IPR011225 Type IV secretory pathway, VirJ component AMK01_RS17985 57ef81e0de9d0c3e9b92589ea720fb85 460 Pfam PF06057 Bacterial virulence protein (VirJ) 266 457 1.2E-82 T 14-09-2016 IPR010333 Bacterial virulence AMK01_RS17985 57ef81e0de9d0c3e9b92589ea720fb85 460 SUPERFAMILY SSF53474 254 454 6.12E-17 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS17985 57ef81e0de9d0c3e9b92589ea720fb85 460 Gene3D G3DSA:3.40.50.1820 40 156 1.9E-6 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS07260 a650582f8e0c0fb382ffe2b4cc7d98b3 305 SUPERFAMILY SSF103481 59 156 8.5E-10 T 14-09-2016 AMK01_RS07260 a650582f8e0c0fb382ffe2b4cc7d98b3 305 PANTHER PTHR22911 11 302 1.5E-99 T 14-09-2016 AMK01_RS07260 a650582f8e0c0fb382ffe2b4cc7d98b3 305 Pfam PF00892 EamA-like transporter family 18 152 2.2E-11 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS07260 a650582f8e0c0fb382ffe2b4cc7d98b3 305 SUPERFAMILY SSF103481 215 296 1.7E-7 T 14-09-2016 AMK01_RS07260 a650582f8e0c0fb382ffe2b4cc7d98b3 305 TIGRFAM TIGR00688 rarD: protein RarD 18 270 5.0E-55 T 14-09-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AMK01_RS07260 a650582f8e0c0fb382ffe2b4cc7d98b3 305 PANTHER PTHR22911:SF41 11 302 1.5E-99 T 14-09-2016 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 SMART SM00304 424 476 0.012 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 SMART SM00304 343 396 1.6E-4 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 Gene3D G3DSA:1.10.287.950 492 696 6.0E-57 T 14-09-2016 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 SUPERFAMILY SSF58104 444 725 2.62E-68 T 14-09-2016 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 Gene3D G3DSA:3.30.450.20 175 317 9.7E-13 T 14-09-2016 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 PANTHER PTHR32089 1 378 5.8E-104 T 14-09-2016 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 PANTHER PTHR32089 459 727 5.8E-104 T 14-09-2016 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 SUPERFAMILY SSF158472 345 393 4.05E-5 T 14-09-2016 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 SMART SM00283 477 724 2.2E-90 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 535 723 2.3E-57 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02240 40e83998cd9f8740f9ef22bd8100f0c6 784 Pfam PF00672 HAMP domain 323 388 1.2E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS08240 5da79bca97cb7c1eb39d04896fb6d65f 123 Pfam PF00072 Response regulator receiver domain 5 116 7.7E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS08240 5da79bca97cb7c1eb39d04896fb6d65f 123 SMART SM00448 3 116 6.2E-33 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS08240 5da79bca97cb7c1eb39d04896fb6d65f 123 PANTHER PTHR24423 2 120 6.4E-37 T 14-09-2016 AMK01_RS08240 5da79bca97cb7c1eb39d04896fb6d65f 123 SUPERFAMILY SSF52172 3 121 6.97E-35 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS08240 5da79bca97cb7c1eb39d04896fb6d65f 123 Gene3D G3DSA:3.40.50.2300 3 121 1.3E-36 T 14-09-2016 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Gene3D G3DSA:1.10.287.380 872 943 2.6E-12 T 14-09-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 SUPERFAMILY SSF47323 643 893 3.92E-62 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946:SF5 2 206 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 SUPERFAMILY SSF52374 381 641 7.43E-140 T 14-09-2016 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 SUPERFAMILY SSF52374 3 195 7.43E-140 T 14-09-2016 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946 875 937 0.0 T 14-09-2016 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Gene3D G3DSA:3.90.740.10 197 377 1.5E-41 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 SUPERFAMILY SSF50677 194 382 4.06E-55 T 14-09-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Pfam PF08264 Anticodon-binding domain of tRNA 673 821 2.5E-42 T 14-09-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946:SF5 875 937 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946:SF5 350 484 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946:SF5 503 857 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946:SF5 231 331 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 SUPERFAMILY SSF46589 879 942 1.26E-16 T 14-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Gene3D G3DSA:3.40.50.620 381 629 9.8E-144 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Gene3D G3DSA:3.40.50.620 4 196 9.8E-144 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946 350 484 0.0 T 14-09-2016 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946 503 857 0.0 T 14-09-2016 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946 231 331 0.0 T 14-09-2016 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Gene3D G3DSA:1.10.730.10 631 813 3.5E-65 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 944 15.704 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 926 0.0 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 879 942 4.0E-20 T 14-09-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PRINTS PR00986 Valyl-tRNA synthetase signature 253 270 2.2E-35 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 2.2E-35 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PRINTS PR00986 Valyl-tRNA synthetase signature 506 527 2.2E-35 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PRINTS PR00986 Valyl-tRNA synthetase signature 386 399 2.2E-35 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PRINTS PR00986 Valyl-tRNA synthetase signature 537 555 2.2E-35 T 14-09-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 631 4.8E-203 T 14-09-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09140 7a9ac6e6f7102a782bf90bc6baeb077e 947 PANTHER PTHR11946 2 206 0.0 T 14-09-2016 AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 SUPERFAMILY SSF51604 119 327 1.7E-52 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 113 1.2E-11 T 14-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 PANTHER PTHR13794:SF60 5 308 4.4E-102 T 14-09-2016 AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 Gene3D G3DSA:3.30.390.10 3 103 8.6E-39 T 14-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 Gene3D G3DSA:3.20.20.120 119 314 2.8E-56 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 PANTHER PTHR13794 5 308 4.4E-102 T 14-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 SMART SM00922 131 222 5.0E-17 T 14-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 SUPERFAMILY SSF54826 5 113 1.22E-30 T 14-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK01_RS12025 a396672e4e0da8e314f0fb2ad3accf1d 327 Pfam PF13378 Enolase C-terminal domain-like 135 289 4.7E-23 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AMK01_RS03545 9afc776e2aae914960192b8b0cb56c4f 638 SUPERFAMILY SSF53756 271 607 1.73E-10 T 14-09-2016 AMK01_RS03545 9afc776e2aae914960192b8b0cb56c4f 638 Gene3D G3DSA:1.25.40.10 14 136 7.6E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS03545 9afc776e2aae914960192b8b0cb56c4f 638 Pfam PF13844 Glycosyl transferase family 41 418 610 3.1E-50 T 14-09-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 AMK01_RS03545 9afc776e2aae914960192b8b0cb56c4f 638 Pfam PF13844 Glycosyl transferase family 41 256 404 3.8E-21 T 14-09-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 AMK01_RS03545 9afc776e2aae914960192b8b0cb56c4f 638 SUPERFAMILY SSF48452 10 136 8.1E-6 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS16160 9eae1ca6b70a6e0113ae28eb318a436e 437 PANTHER PTHR32196:SF21 5 205 3.3E-78 T 14-09-2016 AMK01_RS16160 9eae1ca6b70a6e0113ae28eb318a436e 437 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 426 1.1E-35 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS16160 9eae1ca6b70a6e0113ae28eb318a436e 437 PANTHER PTHR32196 282 435 3.3E-78 T 14-09-2016 AMK01_RS16160 9eae1ca6b70a6e0113ae28eb318a436e 437 PANTHER PTHR32196 5 205 3.3E-78 T 14-09-2016 AMK01_RS16160 9eae1ca6b70a6e0113ae28eb318a436e 437 PANTHER PTHR32196:SF21 282 435 3.3E-78 T 14-09-2016 AMK01_RS07130 5f17538ed1865f923019e191df6acca2 214 SUPERFAMILY SSF109604 13 214 3.14E-59 T 14-09-2016 AMK01_RS07130 5f17538ed1865f923019e191df6acca2 214 SMART SM00471 26 143 1.9E-6 T 14-09-2016 IPR003607 HD/PDEase domain AMK01_RS07130 5f17538ed1865f923019e191df6acca2 214 Pfam PF01966 HD domain 32 133 6.2E-11 T 14-09-2016 IPR006674 HD domain AMK01_RS07130 5f17538ed1865f923019e191df6acca2 214 PANTHER PTHR33594:SF1 14 214 1.1E-49 T 14-09-2016 AMK01_RS07130 5f17538ed1865f923019e191df6acca2 214 Gene3D G3DSA:1.10.3210.10 13 147 3.8E-42 T 14-09-2016 IPR006674 HD domain AMK01_RS07130 5f17538ed1865f923019e191df6acca2 214 Gene3D G3DSA:1.10.3210.10 186 214 3.8E-42 T 14-09-2016 IPR006674 HD domain AMK01_RS07130 5f17538ed1865f923019e191df6acca2 214 PANTHER PTHR33594 14 214 1.1E-49 T 14-09-2016 AMK01_RS07245 1c9b458beeb6b29f9178169f1f610fb0 297 PANTHER PTHR23200:SF43 13 278 6.6E-57 T 14-09-2016 AMK01_RS07245 1c9b458beeb6b29f9178169f1f610fb0 297 Pfam PF00753 Metallo-beta-lactamase superfamily 62 276 2.2E-25 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS07245 1c9b458beeb6b29f9178169f1f610fb0 297 PANTHER PTHR23200 13 278 6.6E-57 T 14-09-2016 AMK01_RS07245 1c9b458beeb6b29f9178169f1f610fb0 297 SMART SM00849 62 276 2.9E-17 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS07245 1c9b458beeb6b29f9178169f1f610fb0 297 SUPERFAMILY SSF56281 61 296 1.57E-40 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS07245 1c9b458beeb6b29f9178169f1f610fb0 297 Gene3D G3DSA:3.60.15.10 56 294 3.0E-45 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS14520 eca38c6d84d1328a083cdf443416f87a 292 PANTHER PTHR18895 2 291 1.2E-52 T 14-09-2016 AMK01_RS14520 eca38c6d84d1328a083cdf443416f87a 292 PIRSF PIRSF000401 6 292 8.3E-65 T 14-09-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMK01_RS14520 eca38c6d84d1328a083cdf443416f87a 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 29.482 T 14-09-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMK01_RS14520 eca38c6d84d1328a083cdf443416f87a 292 PANTHER PTHR18895:SF3 2 291 1.2E-52 T 14-09-2016 AMK01_RS14520 eca38c6d84d1328a083cdf443416f87a 292 Gene3D G3DSA:3.40.50.150 119 286 2.3E-34 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14520 eca38c6d84d1328a083cdf443416f87a 292 SUPERFAMILY SSF53335 44 288 1.05E-40 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14520 eca38c6d84d1328a083cdf443416f87a 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 5 291 8.1E-66 T 14-09-2016 AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 PANTHER PTHR24221 2 610 0.0 T 14-09-2016 AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 PANTHER PTHR24221:SF203 2 610 0.0 T 14-09-2016 AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 SUPERFAMILY SSF90123 22 340 2.35E-50 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 Pfam PF00664 ABC transporter transmembrane region 42 305 2.3E-12 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 Pfam PF00005 ABC transporter 378 531 2.1E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 SUPERFAMILY SSF52540 350 601 5.74E-87 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 Gene3D G3DSA:3.40.50.300 360 595 5.2E-77 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 SMART SM00382 386 577 6.2E-20 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS15510 8199751b525387fa7c3926d0dc74d295 618 Gene3D G3DSA:1.20.1560.10 28 339 1.0E-37 T 14-09-2016 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 Pfam PF13407 Periplasmic binding protein domain 61 308 6.2E-17 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 Gene3D G3DSA:1.10.260.40 4 47 9.1E-15 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 SMART SM00354 3 72 8.0E-6 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 Gene3D G3DSA:3.40.50.2300 172 311 3.7E-19 T 14-09-2016 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 SUPERFAMILY SSF47413 3 49 2.39E-10 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 47 7.8E-11 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 PANTHER PTHR30146 3 321 6.9E-33 T 14-09-2016 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 Gene3D G3DSA:3.40.50.2300 63 171 4.6E-8 T 14-09-2016 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 PANTHER PTHR30146:SF26 3 321 6.9E-33 T 14-09-2016 AMK01_RS13550 e79098cd610809e91545a44d534b258f 333 SUPERFAMILY SSF53822 60 328 3.93E-30 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS25890 6daa57fb53f089db974ee2cba84b527d 95 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 1 93 9.0E-13 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS25890 6daa57fb53f089db974ee2cba84b527d 95 SUPERFAMILY SSF53383 1 92 2.89E-11 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS25890 6daa57fb53f089db974ee2cba84b527d 95 PANTHER PTHR30244 1 95 9.4E-21 T 14-09-2016 AMK01_RS25890 6daa57fb53f089db974ee2cba84b527d 95 Gene3D G3DSA:3.90.1150.10 11 94 8.7E-11 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS25890 6daa57fb53f089db974ee2cba84b527d 95 PANTHER PTHR30244:SF16 1 95 9.4E-21 T 14-09-2016 AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 Pfam PF00106 short chain dehydrogenase 6 191 1.9E-29 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 SUPERFAMILY SSF51735 5 247 3.9E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.7E-18 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 8.7E-18 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.7E-18 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.7E-18 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.7E-18 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 Gene3D G3DSA:3.40.50.720 5 217 6.2E-42 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PANTHER PTHR24322 152 183 4.3E-21 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PANTHER PTHR24322:SF333 152 183 4.3E-21 T 14-09-2016 AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PANTHER PTHR24322:SF333 10 136 4.3E-21 T 14-09-2016 AMK01_RS17680 83690ecd83ef8df38c53171768c979ce 249 PANTHER PTHR24322 10 136 4.3E-21 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10650 5feee0eda6eec4d3f9f1cc774de03ad3 400 PANTHER PTHR30572 1 400 7.8E-123 T 14-09-2016 AMK01_RS10650 5feee0eda6eec4d3f9f1cc774de03ad3 400 Pfam PF12704 MacB-like periplasmic core domain 20 239 1.9E-41 T 14-09-2016 IPR025857 MacB-like periplasmic core domain AMK01_RS10650 5feee0eda6eec4d3f9f1cc774de03ad3 400 Pfam PF02687 FtsX-like permease family 281 393 5.7E-18 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK01_RS10650 5feee0eda6eec4d3f9f1cc774de03ad3 400 PANTHER PTHR30572:SF9 1 400 7.8E-123 T 14-09-2016 AMK01_RS03155 bf027ac528fb4fe42c62440404f65408 95 Pfam PF10048 Predicted integral membrane protein (DUF2282) 35 85 3.9E-25 T 14-09-2016 IPR018740 Protein of unknown function DUF2282, integral membrane AMK01_RS14880 8cad931aa22e1cfeedd4e35fb9465406 294 PANTHER PTHR12862:SF5 1 270 6.6E-48 T 14-09-2016 AMK01_RS14880 8cad931aa22e1cfeedd4e35fb9465406 294 SUPERFAMILY SSF53067 114 282 1.3E-43 T 14-09-2016 AMK01_RS14880 8cad931aa22e1cfeedd4e35fb9465406 294 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 282 4.9E-35 T 14-09-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type AMK01_RS14880 8cad931aa22e1cfeedd4e35fb9465406 294 Gene3D G3DSA:3.30.420.40 1 50 3.0E-5 T 14-09-2016 AMK01_RS14880 8cad931aa22e1cfeedd4e35fb9465406 294 SUPERFAMILY SSF53067 2 110 1.94E-21 T 14-09-2016 AMK01_RS14880 8cad931aa22e1cfeedd4e35fb9465406 294 PANTHER PTHR12862 1 270 6.6E-48 T 14-09-2016 AMK01_RS14880 8cad931aa22e1cfeedd4e35fb9465406 294 Gene3D G3DSA:3.30.420.40 113 269 9.5E-5 T 14-09-2016 AMK01_RS06580 aceb24256e4537359b89c8019e7bc721 376 PANTHER PTHR23083 144 250 9.0E-13 T 14-09-2016 AMK01_RS06580 aceb24256e4537359b89c8019e7bc721 376 PANTHER PTHR23083 315 368 9.0E-13 T 14-09-2016 AMK01_RS06580 aceb24256e4537359b89c8019e7bc721 376 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 2 116 9.0E-34 T 14-09-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI AMK01_RS06580 aceb24256e4537359b89c8019e7bc721 376 SUPERFAMILY SSF48452 140 259 2.74E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06580 aceb24256e4537359b89c8019e7bc721 376 SUPERFAMILY SSF48452 303 349 2.74E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06580 aceb24256e4537359b89c8019e7bc721 376 Pfam PF14559 Tetratricopeptide repeat 205 256 5.0E-6 T 14-09-2016 AMK01_RS06580 aceb24256e4537359b89c8019e7bc721 376 Gene3D G3DSA:1.25.40.10 138 362 4.6E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS11945 6c82940bf578990949db4588b98ff30a 359 PANTHER PTHR39342:SF1 5 348 1.8E-64 T 14-09-2016 AMK01_RS11945 6c82940bf578990949db4588b98ff30a 359 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 17 359 36.16 T 14-09-2016 IPR006507 Uncharacterised protein family UPF0283 AMK01_RS11945 6c82940bf578990949db4588b98ff30a 359 Pfam PF05128 Domain of unknown function (DUF697) 199 349 1.3E-47 T 14-09-2016 IPR021147 Protein of unknown function DUF697 AMK01_RS11945 6c82940bf578990949db4588b98ff30a 359 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 66 352 9.2E-108 T 14-09-2016 IPR006507 Uncharacterised protein family UPF0283 AMK01_RS11945 6c82940bf578990949db4588b98ff30a 359 PANTHER PTHR39342 5 348 1.8E-64 T 14-09-2016 AMK01_RS13055 6e9f70a38e460cb9b1207bfc4c437dd7 210 SUPERFAMILY SSF46689 2 57 6.67E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13055 6e9f70a38e460cb9b1207bfc4c437dd7 210 SUPERFAMILY SSF48498 68 204 4.7E-25 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS13055 6e9f70a38e460cb9b1207bfc4c437dd7 210 PANTHER PTHR30055:SF36 1 117 2.6E-24 T 14-09-2016 AMK01_RS13055 6e9f70a38e460cb9b1207bfc4c437dd7 210 Gene3D G3DSA:1.10.10.60 1 55 6.8E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13055 6e9f70a38e460cb9b1207bfc4c437dd7 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 51 9.6E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13055 6e9f70a38e460cb9b1207bfc4c437dd7 210 PANTHER PTHR30055 1 117 2.6E-24 T 14-09-2016 AMK01_RS13055 6e9f70a38e460cb9b1207bfc4c437dd7 210 Gene3D G3DSA:1.10.357.10 56 204 1.4E-27 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS13055 6e9f70a38e460cb9b1207bfc4c437dd7 210 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 63 179 1.1E-15 T 14-09-2016 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMK01_RS11955 d2e83d18bb0d7dc3c4f1429136f9d34e 172 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 93 104 - T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS11955 d2e83d18bb0d7dc3c4f1429136f9d34e 172 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 11 138 1.8E-36 T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS11955 d2e83d18bb0d7dc3c4f1429136f9d34e 172 SUPERFAMILY SSF55083 9 158 4.71E-51 T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS11955 d2e83d18bb0d7dc3c4f1429136f9d34e 172 PANTHER PTHR20941 7 160 2.7E-57 T 14-09-2016 AMK01_RS11955 d2e83d18bb0d7dc3c4f1429136f9d34e 172 Gene3D G3DSA:3.30.70.560 9 154 2.0E-51 T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS11955 d2e83d18bb0d7dc3c4f1429136f9d34e 172 PANTHER PTHR20941:SF10 7 160 2.7E-57 T 14-09-2016 AMK01_RS11955 d2e83d18bb0d7dc3c4f1429136f9d34e 172 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 10 138 2.4E-43 T 14-09-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 83 7.6E-29 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 14-09-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 Pfam PF00381 PTS HPr component phosphorylation site 5 84 1.4E-25 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 SUPERFAMILY SSF55594 5 90 1.16E-27 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 Gene3D G3DSA:3.30.1340.10 5 90 2.9E-30 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 PANTHER PTHR33705 1 91 2.7E-38 T 14-09-2016 AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 PRINTS PR00107 Phosphocarrier protein signature 15 31 4.7E-11 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 4.7E-11 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 4.7E-11 T 14-09-2016 IPR000032 Phosphocarrier HPr protein-like AMK01_RS00165 f363158e4611e5fa382517e5c5226a27 91 PANTHER PTHR33705:SF2 1 91 2.7E-38 T 14-09-2016 AMK01_RS08625 6dcb66f80a0d6cc2e7d34cf728a5de2a 332 SUPERFAMILY SSF51735 1 115 2.37E-10 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08625 6dcb66f80a0d6cc2e7d34cf728a5de2a 332 SUPERFAMILY SSF48179 203 325 2.69E-25 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS08625 6dcb66f80a0d6cc2e7d34cf728a5de2a 332 PANTHER PTHR21708:SF29 1 330 2.0E-90 T 14-09-2016 AMK01_RS08625 6dcb66f80a0d6cc2e7d34cf728a5de2a 332 Gene3D G3DSA:3.40.50.720 3 199 2.3E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08625 6dcb66f80a0d6cc2e7d34cf728a5de2a 332 Pfam PF02558 Ketopantoate reductase PanE/ApbA 6 175 4.2E-22 T 14-09-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK01_RS08625 6dcb66f80a0d6cc2e7d34cf728a5de2a 332 Gene3D G3DSA:1.10.1040.10 203 328 3.6E-28 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS08625 6dcb66f80a0d6cc2e7d34cf728a5de2a 332 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 203 324 1.4E-24 T 14-09-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 AMK01_RS08625 6dcb66f80a0d6cc2e7d34cf728a5de2a 332 PANTHER PTHR21708 1 330 2.0E-90 T 14-09-2016 AMK01_RS17400 9332392fc8f451147da7015a58cdd9db 233 Pfam PF02397 Bacterial sugar transferase 36 227 8.3E-55 T 14-09-2016 IPR003362 Bacterial sugar transferase AMK01_RS17400 9332392fc8f451147da7015a58cdd9db 233 PANTHER PTHR30576 32 233 5.2E-97 T 14-09-2016 AMK01_RS17400 9332392fc8f451147da7015a58cdd9db 233 PANTHER PTHR30576:SF4 32 233 5.2E-97 T 14-09-2016 AMK01_RS02660 e49d09d9f5fb355b40f6b6878d573690 500 PANTHER PTHR30536 4 500 3.8E-191 T 14-09-2016 AMK01_RS02660 e49d09d9f5fb355b40f6b6878d573690 500 PANTHER PTHR30536:SF5 4 500 3.8E-191 T 14-09-2016 AMK01_RS02660 e49d09d9f5fb355b40f6b6878d573690 500 Pfam PF08666 SAF domain 13 79 3.8E-11 T 14-09-2016 IPR013974 SAF domain AMK01_RS02660 e49d09d9f5fb355b40f6b6878d573690 500 SMART SM00858 13 80 1.8E-12 T 14-09-2016 IPR013974 SAF domain AMK01_RS02660 e49d09d9f5fb355b40f6b6878d573690 500 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 104 498 3.1E-152 T 14-09-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 PANTHER PTHR30465 11 170 1.7E-101 T 14-09-2016 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 PANTHER PTHR30465 196 339 1.7E-101 T 14-09-2016 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 338 9.9E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 Gene3D G3DSA:1.10.3720.10 205 335 5.8E-25 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 Gene3D G3DSA:1.10.3720.10 92 166 5.8E-25 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 SUPERFAMILY SSF161098 93 163 2.88E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 SUPERFAMILY SSF161098 202 325 2.88E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 PANTHER PTHR30465:SF0 11 170 1.7E-101 T 14-09-2016 AMK01_RS10570 2714301b9ccfdc9d97a17c00bcc4fe21 342 PANTHER PTHR30465:SF0 196 339 1.7E-101 T 14-09-2016 AMK01_RS12375 0e5ddf0a8a765a998561b9f9c7ec1b4a 241 PIRSF PIRSF015000 1 241 9.9E-92 T 14-09-2016 IPR014470 Uncharacterised conserved protein UCP01500 AMK01_RS12375 0e5ddf0a8a765a998561b9f9c7ec1b4a 241 Pfam PF10028 Predicted integral membrane protein (DUF2270) 34 223 2.0E-72 T 14-09-2016 IPR014470 Uncharacterised conserved protein UCP01500 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 SMART SM00382 209 337 2.2E-6 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 425 493 6.7E-31 T 14-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 38 515 28.781 T 14-09-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 Gene3D G3DSA:3.40.50.300 171 339 6.6E-44 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 Pfam PF11638 DnaA N-terminal domain 40 100 3.1E-19 T 14-09-2016 IPR024633 DnaA N-terminal domain AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PANTHER PTHR30050 35 137 1.1E-145 T 14-09-2016 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 SUPERFAMILY SSF48295 414 515 6.28E-36 T 14-09-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 SMART SM00760 424 493 2.7E-40 T 14-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 42 513 2.1E-147 T 14-09-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 ProSitePatterns PS01008 DnaA protein signature. 474 493 - T 14-09-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 Gene3D G3DSA:1.10.1750.10 417 515 2.2E-39 T 14-09-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 474 493 3.5E-41 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 210 230 3.5E-41 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 256 3.5E-41 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 274 288 3.5E-41 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 307 334 3.5E-41 T 14-09-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PANTHER PTHR30050 173 516 1.1E-145 T 14-09-2016 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 Gene3D G3DSA:1.10.8.60 342 415 2.6E-12 T 14-09-2016 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PANTHER PTHR30050:SF2 35 137 1.1E-145 T 14-09-2016 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 PANTHER PTHR30050:SF2 173 516 1.1E-145 T 14-09-2016 AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 SUPERFAMILY SSF52540 175 392 9.71E-30 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01965 35d581ab45e1b84bbb8973da9012e406 516 Pfam PF00308 Bacterial dnaA protein 175 398 3.2E-85 T 14-09-2016 IPR013317 Chromosomal replication initiator protein DnaA AMK01_RS15820 6c7496d960d4df3bba9e9866ec53495b 227 SUPERFAMILY SSF48452 98 202 2.28E-5 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS15820 6c7496d960d4df3bba9e9866ec53495b 227 Pfam PF09976 Tetratricopeptide repeat-like domain 24 212 5.0E-19 T 14-09-2016 IPR018704 Tetratricopeptide repeat-like domain AMK01_RS12965 6e082fd726c40db46dcd717125efbc12 317 PANTHER PTHR32243 12 61 4.9E-115 T 14-09-2016 AMK01_RS12965 6e082fd726c40db46dcd717125efbc12 317 PANTHER PTHR32243 92 317 4.9E-115 T 14-09-2016 AMK01_RS12965 6e082fd726c40db46dcd717125efbc12 317 SUPERFAMILY SSF161098 19 316 2.06E-63 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12965 6e082fd726c40db46dcd717125efbc12 317 PANTHER PTHR32243:SF11 12 61 4.9E-115 T 14-09-2016 AMK01_RS12965 6e082fd726c40db46dcd717125efbc12 317 PANTHER PTHR32243:SF11 92 317 4.9E-115 T 14-09-2016 AMK01_RS12965 6e082fd726c40db46dcd717125efbc12 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 304 6.4E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12965 6e082fd726c40db46dcd717125efbc12 317 Gene3D G3DSA:1.10.3720.10 18 303 4.2E-60 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 Gene3D G3DSA:1.20.5.510 8 46 9.5E-23 T 14-09-2016 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 PRINTS PR00162 Rieske 2Fe-2S subunit signature 130 141 1.1E-15 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 PRINTS PR00162 Rieske 2Fe-2S subunit signature 152 164 1.1E-15 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 PRINTS PR00162 Rieske 2Fe-2S subunit signature 164 176 1.1E-15 T 14-09-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 SUPERFAMILY SSF50022 36 187 3.03E-40 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 Pfam PF00355 Rieske [2Fe-2S] domain 125 178 1.2E-12 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 7 46 8.9E-21 T 14-09-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 39 2.8E-5 T 14-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 PANTHER PTHR10134:SF1 13 192 2.5E-66 T 14-09-2016 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 PANTHER PTHR10134 13 192 2.5E-66 T 14-09-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 Gene3D G3DSA:2.102.10.10 53 190 7.2E-37 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS15490 fe123576adf38c4518d1c60d22cb9124 192 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 15 192 1.8E-72 T 14-09-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMK01_RS16415 0c3b36748b25a08164f03a68be374d97 660 PANTHER PTHR23028 4 449 5.7E-84 T 14-09-2016 AMK01_RS16415 0c3b36748b25a08164f03a68be374d97 660 PANTHER PTHR23028:SF53 4 449 5.7E-84 T 14-09-2016 AMK01_RS16415 0c3b36748b25a08164f03a68be374d97 660 Pfam PF01757 Acyltransferase family 6 334 2.5E-30 T 14-09-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK01_RS05770 6f8c952de846284ccedb5fb7a45a3f08 317 SUPERFAMILY SSF51735 6 282 6.23E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05770 6f8c952de846284ccedb5fb7a45a3f08 317 PANTHER PTHR14194:SF46 4 304 4.6E-68 T 14-09-2016 AMK01_RS05770 6f8c952de846284ccedb5fb7a45a3f08 317 Pfam PF05368 NmrA-like family 9 242 4.5E-44 T 14-09-2016 IPR008030 NmrA-like domain AMK01_RS05770 6f8c952de846284ccedb5fb7a45a3f08 317 PANTHER PTHR14194 4 304 4.6E-68 T 14-09-2016 AMK01_RS05770 6f8c952de846284ccedb5fb7a45a3f08 317 Gene3D G3DSA:3.40.50.720 4 237 3.4E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13790 ebb4fb45c7fe8722784ef6ad2954545b 258 Pfam PF06707 Protein of unknown function (DUF1194) 24 226 6.8E-77 T 14-09-2016 IPR010607 Protein of unknown function DUF1194 AMK01_RS13790 ebb4fb45c7fe8722784ef6ad2954545b 258 SUPERFAMILY SSF53300 23 224 1.19E-12 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS09250 503976c7212de9d7ccfe9e4698a0fdaa 290 PANTHER PTHR13779:SF28 214 289 9.9E-79 T 14-09-2016 AMK01_RS09250 503976c7212de9d7ccfe9e4698a0fdaa 290 PANTHER PTHR13779:SF28 27 191 9.9E-79 T 14-09-2016 AMK01_RS09250 503976c7212de9d7ccfe9e4698a0fdaa 290 Gene3D G3DSA:3.40.50.300 80 195 1.3E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09250 503976c7212de9d7ccfe9e4698a0fdaa 290 SUPERFAMILY SSF52540 43 196 3.67E-19 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09250 503976c7212de9d7ccfe9e4698a0fdaa 290 PANTHER PTHR13779 214 289 9.9E-79 T 14-09-2016 AMK01_RS09250 503976c7212de9d7ccfe9e4698a0fdaa 290 PANTHER PTHR13779 27 191 9.9E-79 T 14-09-2016 AMK01_RS09250 503976c7212de9d7ccfe9e4698a0fdaa 290 Pfam PF05673 Protein of unknown function (DUF815) 36 282 3.9E-105 T 14-09-2016 IPR008533 Domain of unknown function DUF815 AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 Gene3D G3DSA:1.20.1250.20 509 530 1.8E-22 T 14-09-2016 AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 Gene3D G3DSA:1.20.1250.20 288 449 1.8E-22 T 14-09-2016 AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 36 525 2.5E-120 T 14-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 Gene3D G3DSA:1.20.1250.20 30 213 1.0E-24 T 14-09-2016 AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 SUPERFAMILY SSF103473 21 225 2.49E-63 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 SUPERFAMILY SSF103473 504 529 2.49E-63 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 SUPERFAMILY SSF103473 272 443 2.49E-63 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 PANTHER PTHR23501 18 532 4.7E-271 T 14-09-2016 AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 PANTHER PTHR23501:SF51 18 532 4.7E-271 T 14-09-2016 AMK01_RS06150 0ba73c160bce58f782bc3b7897953bfa 539 Pfam PF07690 Major Facilitator Superfamily 41 433 3.2E-44 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS02355 175b7fdd074c018cdd24cfa1f233496e 184 SMART SM00554 72 183 7.3E-18 T 14-09-2016 IPR000782 FAS1 domain AMK01_RS02355 175b7fdd074c018cdd24cfa1f233496e 184 SUPERFAMILY SSF82153 37 182 8.11E-36 T 14-09-2016 IPR000782 FAS1 domain AMK01_RS02355 175b7fdd074c018cdd24cfa1f233496e 184 Gene3D G3DSA:2.30.180.10 37 182 1.4E-33 T 14-09-2016 IPR000782 FAS1 domain AMK01_RS02355 175b7fdd074c018cdd24cfa1f233496e 184 Pfam PF02469 Fasciclin domain 48 182 1.3E-29 T 14-09-2016 IPR000782 FAS1 domain AMK01_RS02355 175b7fdd074c018cdd24cfa1f233496e 184 PANTHER PTHR10900 20 182 8.3E-40 T 14-09-2016 AMK01_RS10945 5b187a9bb9c7e9e00695303ba79a92ca 171 SUPERFAMILY SSF46785 12 128 2.27E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10945 5b187a9bb9c7e9e00695303ba79a92ca 171 PANTHER PTHR33164 11 157 8.1E-20 T 14-09-2016 AMK01_RS10945 5b187a9bb9c7e9e00695303ba79a92ca 171 Gene3D G3DSA:1.10.10.10 13 147 3.7E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10945 5b187a9bb9c7e9e00695303ba79a92ca 171 SMART SM00347 33 139 1.3E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS10945 5b187a9bb9c7e9e00695303ba79a92ca 171 Pfam PF12802 MarR family 39 97 4.5E-10 T 14-09-2016 AMK01_RS10945 5b187a9bb9c7e9e00695303ba79a92ca 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 1.0E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS10945 5b187a9bb9c7e9e00695303ba79a92ca 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 1.0E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS10945 5b187a9bb9c7e9e00695303ba79a92ca 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 1.0E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 PIRSF PIRSF006621 1 323 2.0E-72 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 Gene3D G3DSA:3.20.20.70 5 248 1.5E-76 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 8 321 2.6E-129 T 14-09-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 SUPERFAMILY SSF51395 8 301 4.87E-76 T 14-09-2016 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 Pfam PF01207 Dihydrouridine synthase (Dus) 10 309 2.8E-76 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 PANTHER PTHR11082 5 301 1.4E-133 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 14-09-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 323 48.454 T 14-09-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AMK01_RS13195 c7ec36a818f7759841f8d4b9927822fe 333 PANTHER PTHR11082:SF29 5 301 1.4E-133 T 14-09-2016 AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 PRINTS PR00313 NodO calcium binding signature 488 499 1.4E-7 T 14-09-2016 AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 PRINTS PR00313 NodO calcium binding signature 598 607 1.4E-7 T 14-09-2016 AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 PRINTS PR00313 NodO calcium binding signature 571 579 1.4E-7 T 14-09-2016 AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 PRINTS PR00313 NodO calcium binding signature 500 508 1.4E-7 T 14-09-2016 AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 Pfam PF13229 Right handed beta helix region 104 274 4.7E-13 T 14-09-2016 AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 Gene3D G3DSA:2.150.10.10 468 659 6.8E-28 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 SUPERFAMILY SSF51126 2 394 1.63E-53 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 SUPERFAMILY SSF51120 482 696 1.05E-30 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 576 594 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 Gene3D G3DSA:2.160.20.10 2 394 4.6E-54 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 496 514 - T 14-09-2016 IPR018511 Hemolysin-type calcium-binding conserved site AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 SMART SM00710 172 202 1100.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 SMART SM00710 88 110 92.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 SMART SM00710 134 160 790.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 SMART SM00710 238 283 1400.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 SMART SM00710 215 236 1200.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS09575 78d38cf40b6084c08063b9810e28a7dc 706 SMART SM00710 111 133 2.2 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 PANTHER PTHR10381 1 207 7.2E-130 T 14-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 SUPERFAMILY SSF52096 18 201 4.23E-73 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 5.1E-95 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 67 87 2.1E-49 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 27 42 2.1E-49 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 176 195 2.1E-49 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 98 115 2.1E-49 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 119 138 2.1E-49 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 Pfam PF00574 Clp protease 21 200 4.8E-86 T 14-09-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 PANTHER PTHR10381:SF11 1 207 7.2E-130 T 14-09-2016 AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 120 133 - T 14-09-2016 IPR033135 ClpP, histidine active site AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 Gene3D G3DSA:3.90.226.10 11 200 7.8E-85 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 98 109 - T 14-09-2016 IPR018215 ClpP, Ser active site AMK01_RS08020 2ecc63c76e6f92607df347ab3560528d 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 11 201 41.738 T 14-09-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 Gene3D G3DSA:3.30.590.10 144 464 2.3E-95 T 14-09-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 SUPERFAMILY SSF54368 33 138 1.57E-19 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 277 292 - T 14-09-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 Gene3D G3DSA:3.10.20.70 34 143 2.3E-16 T 14-09-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 PANTHER PTHR20852:SF63 39 478 1.4E-179 T 14-09-2016 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 SUPERFAMILY SSF55931 141 475 2.16E-109 T 14-09-2016 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 PANTHER PTHR20852 39 478 1.4E-179 T 14-09-2016 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 SMART SM01230 141 397 5.3E-110 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS03735 594e89e14b3783fcb4b58cee5dc78c5f 478 Pfam PF00120 Glutamine synthetase, catalytic domain 143 472 7.0E-105 T 14-09-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 536 698 2.4E-29 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 SMART SM00267 527 700 9.5E-42 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 456 534 5.1E-8 T 14-09-2016 IPR000014 PAS domain AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 SMART SM00086 485 527 4.9E-7 T 14-09-2016 IPR001610 PAC motif AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 SUPERFAMILY SSF55073 543 701 1.49E-36 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 Pfam PF00990 Diguanylate cyclase, GGDEF domain 538 696 9.3E-37 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 Gene3D G3DSA:3.20.20.450 712 962 1.2E-90 T 14-09-2016 IPR001633 EAL domain AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 Pfam PF08447 PAS fold 443 521 1.0E-14 T 14-09-2016 IPR013655 PAS fold-3 GO:0005515 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 PANTHER PTHR33121 76 90 1.7E-67 T 14-09-2016 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 PANTHER PTHR33121 660 962 1.7E-67 T 14-09-2016 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 PANTHER PTHR33121:SF13 76 90 1.7E-67 T 14-09-2016 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 PANTHER PTHR33121:SF13 660 962 1.7E-67 T 14-09-2016 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 Pfam PF07696 7TMR-DISM extracellular 2 56 181 4.1E-5 T 14-09-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 SMART SM00052 710 955 1.1E-101 T 14-09-2016 IPR001633 EAL domain AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 SUPERFAMILY SSF55785 419 528 1.2E-17 T 14-09-2016 IPR000014 PAS domain AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 Gene3D G3DSA:3.30.450.20 410 525 3.4E-22 T 14-09-2016 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 SUPERFAMILY SSF141868 715 963 5.62E-80 T 14-09-2016 IPR001633 EAL domain AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 Gene3D G3DSA:3.30.70.270 540 703 5.0E-43 T 14-09-2016 AMK01_RS04965 22614d2ff6953c2aae7430d556f29f41 970 Pfam PF00563 EAL domain 717 950 1.0E-67 T 14-09-2016 IPR001633 EAL domain AMK01_RS01690 cba7b503a913974fdb2a54ff69d8a23d 365 Gene3D G3DSA:2.120.10.30 172 216 1.5E-6 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS01690 cba7b503a913974fdb2a54ff69d8a23d 365 Gene3D G3DSA:2.120.10.30 268 336 1.5E-6 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS01690 cba7b503a913974fdb2a54ff69d8a23d 365 SUPERFAMILY SSF50969 57 346 1.88E-19 T 14-09-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AMK01_RS01690 cba7b503a913974fdb2a54ff69d8a23d 365 PIRSF PIRSF028101 1 360 1.5E-151 T 14-09-2016 IPR008311 Uncharacterised conserved protein UCP028101 AMK01_RS01690 cba7b503a913974fdb2a54ff69d8a23d 365 Gene3D G3DSA:2.130.10.10 54 171 5.7E-9 T 14-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK01_RS01690 cba7b503a913974fdb2a54ff69d8a23d 365 Pfam PF07433 Protein of unknown function (DUF1513) 66 358 2.9E-107 T 14-09-2016 IPR008311 Uncharacterised conserved protein UCP028101 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 138 148 - T 14-09-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 PANTHER PTHR11964:SF1 1 406 4.9E-174 T 14-09-2016 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 Gene3D G3DSA:3.30.300.10 282 412 3.8E-66 T 14-09-2016 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 283 291 - T 14-09-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 PIRSF PIRSF000497 1 412 5.2E-147 T 14-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 PANTHER PTHR11964 1 406 4.9E-174 T 14-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 SUPERFAMILY SSF55973 133 256 8.24E-41 T 14-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 Gene3D G3DSA:3.30.300.10 12 154 2.1E-32 T 14-09-2016 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 Gene3D G3DSA:3.30.300.10 249 281 2.8E-21 T 14-09-2016 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 SUPERFAMILY SSF55973 257 412 1.37E-63 T 14-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 257 400 3.2E-64 T 14-09-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 Pfam PF02772 S-adenosylmethionine synthetase, central domain 137 255 3.3E-36 T 14-09-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 121 8.4E-32 T 14-09-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 Gene3D G3DSA:3.30.300.10 155 248 4.8E-30 T 14-09-2016 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 410 1.7E-133 T 14-09-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS02040 f291569b36eb2582a1d91c413e5a66d4 417 SUPERFAMILY SSF55973 4 129 5.1E-30 T 14-09-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 PANTHER PTHR32243:SF9 156 386 3.3E-112 T 14-09-2016 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 PANTHER PTHR32243:SF9 14 57 3.3E-112 T 14-09-2016 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 PANTHER PTHR32243 156 386 3.3E-112 T 14-09-2016 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 PANTHER PTHR32243 14 57 3.3E-112 T 14-09-2016 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 Gene3D G3DSA:1.10.3720.10 154 373 2.1E-60 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 Gene3D G3DSA:1.10.3720.10 13 53 2.1E-60 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 190 379 3.0E-12 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 SUPERFAMILY SSF161098 155 386 9.0E-61 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03695 21880d9889a4f17553a74b453359b261 387 SUPERFAMILY SSF161098 13 53 9.0E-61 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20760 15969f789a474723ef6ae59f57f9b3bb 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 102 1.6E-8 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK01_RS20760 15969f789a474723ef6ae59f57f9b3bb 393 Gene3D G3DSA:1.20.140.10 220 372 1.3E-10 T 14-09-2016 AMK01_RS20760 15969f789a474723ef6ae59f57f9b3bb 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 366 1.5E-5 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS20760 15969f789a474723ef6ae59f57f9b3bb 393 Gene3D G3DSA:1.10.540.10 10 92 1.6E-18 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK01_RS20760 15969f789a474723ef6ae59f57f9b3bb 393 Gene3D G3DSA:2.40.110.10 121 219 1.3E-4 T 14-09-2016 AMK01_RS20760 15969f789a474723ef6ae59f57f9b3bb 393 SUPERFAMILY SSF47203 231 376 2.42E-10 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS20760 15969f789a474723ef6ae59f57f9b3bb 393 SUPERFAMILY SSF56645 18 215 2.23E-30 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 PANTHER PTHR11014:SF63 1 389 5.2E-130 T 14-09-2016 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 372 1.1E-97 T 14-09-2016 IPR017439 Amidohydrolase GO:0016787 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 Gene3D G3DSA:3.40.630.10 7 178 6.5E-92 T 14-09-2016 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 Gene3D G3DSA:3.40.630.10 300 384 6.5E-92 T 14-09-2016 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 SUPERFAMILY SSF53187 300 385 8.86E-81 T 14-09-2016 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 SUPERFAMILY SSF53187 5 197 8.86E-81 T 14-09-2016 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 PIRSF PIRSF005962 2 389 3.4E-114 T 14-09-2016 IPR017439 Amidohydrolase GO:0016787 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 Pfam PF07687 Peptidase dimerisation domain 185 274 6.8E-6 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 Pfam PF01546 Peptidase family M20/M25/M40 73 384 1.0E-34 T 14-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 Gene3D G3DSA:3.30.70.360 181 299 5.0E-33 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 PANTHER PTHR11014 1 389 5.2E-130 T 14-09-2016 AMK01_RS17700 cb0a57d845bab4e742d4bf269584fe09 389 SUPERFAMILY SSF55031 183 298 4.04E-26 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS17655 ee62fe6c8676ef09ae6e9024d867d8c0 306 Gene3D G3DSA:3.90.245.10 3 300 2.1E-70 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS17655 ee62fe6c8676ef09ae6e9024d867d8c0 306 SUPERFAMILY SSF53590 2 300 2.22E-68 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS17655 ee62fe6c8676ef09ae6e9024d867d8c0 306 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 277 1.7E-52 T 14-09-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK01_RS17655 ee62fe6c8676ef09ae6e9024d867d8c0 306 PANTHER PTHR12304 3 305 2.6E-54 T 14-09-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AMK01_RS09750 aee24e480436a822f0cfde8a1e5bd7fb 293 Pfam PF06230 Protein of unknown function (DUF1009) 68 281 1.8E-66 T 14-09-2016 IPR010415 Protein of unknown function DUF1009 AMK01_RS09750 aee24e480436a822f0cfde8a1e5bd7fb 293 PANTHER PTHR39962:SF1 14 286 6.7E-54 T 14-09-2016 AMK01_RS09750 aee24e480436a822f0cfde8a1e5bd7fb 293 PANTHER PTHR39962 14 286 6.7E-54 T 14-09-2016 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 Gene3D G3DSA:1.10.720.10 1 46 4.8E-22 T 14-09-2016 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 Gene3D G3DSA:2.40.50.140 49 117 3.4E-34 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 1.1E-16 T 14-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 SMART SM00357 52 118 3.3E-18 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 7.9E-23 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 PANTHER PTHR15184 19 402 2.0E-189 T 14-09-2016 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 SUPERFAMILY SSF52540 90 371 8.01E-70 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 SMART SM00959 5 47 4.0E-18 T 14-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 SUPERFAMILY SSF68912 1 45 1.18E-11 T 14-09-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 Gene3D G3DSA:3.40.50.300 131 416 1.6E-108 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.3E-214 T 14-09-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 PANTHER PTHR15184:SF34 19 402 2.0E-189 T 14-09-2016 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 SMART SM00382 170 355 1.1E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 248.435 T 14-09-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 SUPERFAMILY SSF50249 48 125 1.94E-28 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS21190 a55c9bf4e1e9515e779b09551c59911a 418 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.1E-30 T 14-09-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 AMK01_RS18255 26bbf605d6782d70fcaa015bd8c7cfdc 324 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 14-09-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMK01_RS18255 26bbf605d6782d70fcaa015bd8c7cfdc 324 SUPERFAMILY SSF53686 7 317 9.43E-87 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS18255 26bbf605d6782d70fcaa015bd8c7cfdc 324 PANTHER PTHR10314:SF36 1 322 4.8E-101 T 14-09-2016 AMK01_RS18255 26bbf605d6782d70fcaa015bd8c7cfdc 324 Gene3D G3DSA:3.40.50.1100 69 321 1.2E-63 T 14-09-2016 AMK01_RS18255 26bbf605d6782d70fcaa015bd8c7cfdc 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 308 1.1E-70 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS18255 26bbf605d6782d70fcaa015bd8c7cfdc 324 PANTHER PTHR10314 1 322 4.8E-101 T 14-09-2016 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 SUPERFAMILY SSF53697 14 328 3.34E-62 T 14-09-2016 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 Pfam PF00571 CBS domain 210 265 2.1E-6 T 14-09-2016 IPR000644 CBS domain AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 Pfam PF00571 CBS domain 275 327 2.9E-9 T 14-09-2016 IPR000644 CBS domain AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 PANTHER PTHR38418:SF1 11 207 7.4E-38 T 14-09-2016 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 Pfam PF01380 SIS domain 55 182 2.3E-29 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 Gene3D G3DSA:3.40.50.10490 17 201 4.8E-47 T 14-09-2016 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 PIRSF PIRSF004692 1 331 2.1E-128 T 14-09-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 PANTHER PTHR38418 11 207 7.4E-38 T 14-09-2016 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 Gene3D G3DSA:3.10.580.10 203 327 4.4E-36 T 14-09-2016 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 55 321 2.3E-92 T 14-09-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 SMART SM00116 282 330 0.05 T 14-09-2016 IPR000644 CBS domain AMK01_RS18360 2f4af9f0800559c8806916bc9ba518b9 331 SMART SM00116 219 267 1.6E-4 T 14-09-2016 IPR000644 CBS domain AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 292 37.166 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 290 3.7E-66 T 14-09-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 PANTHER PTHR10025 2 293 1.7E-139 T 14-09-2016 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 Gene3D G3DSA:3.40.50.720 142 273 3.6E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 SUPERFAMILY SSF53223 2 121 1.44E-36 T 14-09-2016 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 269 277 - T 14-09-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 SUPERFAMILY SSF51735 122 290 6.47E-51 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 6.8E-35 T 14-09-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 5.8E-78 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 5.8E-78 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 265 283 5.8E-78 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 248 264 5.8E-78 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 5.8E-78 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 5.8E-78 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 5.8E-78 T 14-09-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK01_RS03675 3af5d9dbfbd17a8336ae327611248916 299 Gene3D G3DSA:3.40.192.10 6 141 9.3E-42 T 14-09-2016 AMK01_RS20690 343f3851db6a1d23f83db3d02970b2d2 216 PANTHER PTHR41299:SF1 6 213 8.4E-25 T 14-09-2016 AMK01_RS20690 343f3851db6a1d23f83db3d02970b2d2 216 PANTHER PTHR41299 6 213 8.4E-25 T 14-09-2016 AMK01_RS20690 343f3851db6a1d23f83db3d02970b2d2 216 Gene3D G3DSA:3.40.50.10240 3 129 2.2E-15 T 14-09-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 AMK01_RS20690 343f3851db6a1d23f83db3d02970b2d2 216 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 30 127 7.4E-10 T 14-09-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 AMK01_RS20690 343f3851db6a1d23f83db3d02970b2d2 216 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 158 202 7.3E-6 T 14-09-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK01_RS20690 343f3851db6a1d23f83db3d02970b2d2 216 SMART SM00983 142 205 1.6E-17 T 14-09-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK01_RS20690 343f3851db6a1d23f83db3d02970b2d2 216 SUPERFAMILY SSF63999 5 125 7.19E-20 T 14-09-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 AMK01_RS20690 343f3851db6a1d23f83db3d02970b2d2 216 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 7 206 7.4E-42 T 14-09-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 PANTHER PTHR13748 348 387 8.4E-183 T 14-09-2016 AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 SUPERFAMILY SSF52540 3 327 5.4E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 Gene3D G3DSA:3.40.50.300 3 230 7.0E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 Gene3D G3DSA:3.30.1220.10 248 375 4.5E-17 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 211 3.1E-54 T 14-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 PANTHER PTHR13748 1 332 8.4E-183 T 14-09-2016 AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 SMART SM00833 259 375 2.1E-47 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 259 375 9.1E-27 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 PANTHER PTHR13748:SF4 348 387 8.4E-183 T 14-09-2016 AMK01_RS13910 cd1a414ebfa129df9860ab2bbfc0ec25 401 PANTHER PTHR13748:SF4 1 332 8.4E-183 T 14-09-2016 AMK01_RS10590 9786dfe1367f5f188370e753f4cf698b 176 PANTHER PTHR30543 1 127 1.5E-27 T 14-09-2016 AMK01_RS10590 9786dfe1367f5f188370e753f4cf698b 176 SUPERFAMILY SSF52218 1 136 1.39E-28 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS10590 9786dfe1367f5f188370e753f4cf698b 176 Gene3D G3DSA:3.40.50.360 1 174 3.4E-33 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS10590 9786dfe1367f5f188370e753f4cf698b 176 PANTHER PTHR30543:SF6 1 127 1.5E-27 T 14-09-2016 AMK01_RS10590 9786dfe1367f5f188370e753f4cf698b 176 Pfam PF03358 NADPH-dependent FMN reductase 1 126 4.1E-25 T 14-09-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMK01_RS05060 a55c0827cb81b3c724fb99c4a0d3911c 163 Pfam PF05258 Protein of unknown function (DUF721) 11 108 4.1E-20 T 14-09-2016 IPR007922 Protein of unknown function DUF721/UPF0232 AMK01_RS05060 a55c0827cb81b3c724fb99c4a0d3911c 163 PIRSF PIRSF032064 1 163 3.8E-70 T 14-09-2016 IPR010593 Protein of unknown function DUF1159 AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 SUPERFAMILY SSF53822 64 336 4.71E-77 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 Gene3D G3DSA:3.40.50.2300 177 334 6.3E-47 T 14-09-2016 AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 51 2.4E-7 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 Gene3D G3DSA:1.10.260.40 3 54 1.2E-15 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 Gene3D G3DSA:3.40.50.2300 55 176 1.8E-36 T 14-09-2016 AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 PANTHER PTHR30146 4 335 6.1E-94 T 14-09-2016 AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 Pfam PF13377 Periplasmic binding protein-like domain 172 333 1.6E-36 T 14-09-2016 AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 SMART SM00354 4 74 1.3E-16 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18690 5b2e979338ed2c00d1c9ba73cdcecfbe 340 SUPERFAMILY SSF47413 4 62 5.63E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS17225 5f5a211a048f80aa053631b854857131 271 Gene3D G3DSA:3.40.50.1820 3 256 4.4E-46 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS17225 5f5a211a048f80aa053631b854857131 271 PANTHER PTHR23024 18 230 2.0E-33 T 14-09-2016 AMK01_RS17225 5f5a211a048f80aa053631b854857131 271 PANTHER PTHR23024:SF24 18 230 2.0E-33 T 14-09-2016 AMK01_RS17225 5f5a211a048f80aa053631b854857131 271 SUPERFAMILY SSF53474 16 256 7.33E-34 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS17225 5f5a211a048f80aa053631b854857131 271 Pfam PF07859 alpha/beta hydrolase fold 35 230 2.5E-37 T 14-09-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AMK01_RS14540 96c5a321c901f8a9ca0d57166c77084c 163 PANTHER PTHR37952:SF2 1 153 5.0E-41 T 14-09-2016 AMK01_RS14540 96c5a321c901f8a9ca0d57166c77084c 163 PIRSF PIRSF003174 1 163 3.1E-49 T 14-09-2016 IPR010292 Uncharacterised protein family CreA AMK01_RS14540 96c5a321c901f8a9ca0d57166c77084c 163 PANTHER PTHR37952 1 153 5.0E-41 T 14-09-2016 AMK01_RS14540 96c5a321c901f8a9ca0d57166c77084c 163 Pfam PF05981 CreA protein 27 153 6.3E-46 T 14-09-2016 IPR010292 Uncharacterised protein family CreA AMK01_RS06845 2b297c0369eb526a10e58dfd7cb076ef 265 Gene3D G3DSA:2.60.120.10 119 264 6.7E-68 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS06845 2b297c0369eb526a10e58dfd7cb076ef 265 PIRSF PIRSF036628 1 265 1.3E-115 T 14-09-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 AMK01_RS06845 2b297c0369eb526a10e58dfd7cb076ef 265 Pfam PF04962 KduI/IolB family 10 262 1.5E-111 T 14-09-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 AMK01_RS06845 2b297c0369eb526a10e58dfd7cb076ef 265 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 17 262 7.9E-99 T 14-09-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 AMK01_RS06845 2b297c0369eb526a10e58dfd7cb076ef 265 PANTHER PTHR39193 13 263 1.6E-104 T 14-09-2016 AMK01_RS06845 2b297c0369eb526a10e58dfd7cb076ef 265 Gene3D G3DSA:2.60.120.10 14 118 2.3E-42 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS06845 2b297c0369eb526a10e58dfd7cb076ef 265 PANTHER PTHR39193:SF1 13 263 1.6E-104 T 14-09-2016 AMK01_RS06845 2b297c0369eb526a10e58dfd7cb076ef 265 SUPERFAMILY SSF51182 8 251 3.78E-76 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS18950 28d850022b53373ef552d020f7def4c5 265 Pfam PF13490 Putative zinc-finger 9 43 6.5E-10 T 14-09-2016 IPR027383 Putative zinc-finger AMK01_RS01355 52a5afab68c9bb7afb53f9f8653a3feb 402 SUPERFAMILY SSF53720 68 156 2.49E-6 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS01355 52a5afab68c9bb7afb53f9f8653a3feb 402 Pfam PF05893 Acyl-CoA reductase (LuxC) 80 279 2.9E-26 T 14-09-2016 IPR008670 Acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723|UniPathway: UPA00569 AMK01_RS11050 884d00d64a619234bee27f7549184820 260 SUPERFAMILY SSF51556 2 255 1.17E-84 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS11050 884d00d64a619234bee27f7549184820 260 PIRSF PIRSF005902 1 258 3.5E-77 T 14-09-2016 IPR001130 TatD family GO:0016788 AMK01_RS11050 884d00d64a619234bee27f7549184820 260 Pfam PF01026 TatD related DNase 3 255 1.9E-79 T 14-09-2016 IPR001130 TatD family GO:0016788 AMK01_RS11050 884d00d64a619234bee27f7549184820 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-09-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMK01_RS11050 884d00d64a619234bee27f7549184820 260 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 3.0E-84 T 14-09-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 AMK01_RS11050 884d00d64a619234bee27f7549184820 260 PANTHER PTHR10060 2 258 1.0E-113 T 14-09-2016 IPR001130 TatD family GO:0016788 AMK01_RS11050 884d00d64a619234bee27f7549184820 260 Gene3D G3DSA:3.20.20.140 2 255 7.1E-87 T 14-09-2016 AMK01_RS11050 884d00d64a619234bee27f7549184820 260 PANTHER PTHR10060:SF20 2 258 1.0E-113 T 14-09-2016 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 Gene3D G3DSA:1.10.1660.10 67 146 2.7E-16 T 14-09-2016 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 25 2.3E-12 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 25 38 2.3E-12 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 2.3E-12 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 PANTHER PTHR30204:SF0 5 143 5.5E-72 T 14-09-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 SUPERFAMILY SSF46955 13 136 5.13E-28 T 14-09-2016 IPR009061 Putative DNA-binding domain AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 Pfam PF00376 MerR family regulatory protein 14 50 1.2E-11 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 PANTHER PTHR30204 5 143 5.5E-72 T 14-09-2016 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 Pfam PF09278 MerR, DNA binding 55 120 1.7E-17 T 14-09-2016 IPR015358 Transcription regulator MerR, DNA binding AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 SMART SM00422 13 81 6.8E-23 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 13 152 5.5E-68 T 14-09-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AMK01_RS19860 adf39e23f6b33e570ed16255388101a5 156 Gene3D G3DSA:1.10.1660.10 12 66 1.7E-19 T 14-09-2016 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Gene3D G3DSA:1.20.120.20 553 656 9.2E-6 T 14-09-2016 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 SUPERFAMILY SSF58113 528 711 3.01E-9 T 14-09-2016 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 SUPERFAMILY SSF58113 1880 2041 3.53E-5 T 14-09-2016 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 689 1089 6.0E-9 T 14-09-2016 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 SUPERFAMILY SSF58113 352 531 9.29E-5 T 14-09-2016 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 1316 1499 4.6E-9 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 1527 1676 1.0E-4 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 200 301 1.3 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 676 871 8.0E-6 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 970 1130 5.2E-5 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 429 579 2.7E-5 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 1569 1764 2.6E-5 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 519 670 7.2E-14 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 310 493 7.8E-6 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 1799 1988 2.2E-8 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 1119 1284 1.1E-5 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 1410 1565 2.4E-5 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 555 739 1.4E-14 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 1941 2076 4.3E-6 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 280 453 2.2E-5 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 1205 1381 4.4E-10 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 Pfam PF01442 Apolipoprotein A1/A4/E domain 844 1024 6.3E-5 T 14-09-2016 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: REACT_22258 AMK01_RS11985 04528fd75f58ec27c2b49662403b173f 2324 SUPERFAMILY SSF58113 1208 1377 1.24E-5 T 14-09-2016 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 ProSitePatterns PS00398 Site-specific recombinases signature 2. 62 74 - T 14-09-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 Gene3D G3DSA:1.10.10.60 153 197 6.4E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-09-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 Pfam PF02796 Helix-turn-helix domain of resolvase 154 197 1.6E-6 T 14-09-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 SUPERFAMILY SSF53041 1 147 8.11E-32 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 Pfam PF00239 Resolvase, N terminal domain 4 150 1.4E-30 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 Gene3D G3DSA:3.40.50.1390 3 132 1.6E-29 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 PANTHER PTHR30461 1 195 1.1E-23 T 14-09-2016 AMK01_RS00555 a7c69168dba4b44931f40a2de6312147 210 SMART SM00857 3 151 1.3E-38 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS05305 e22b8e062163c7b7f66c01f9f747e010 98 Pfam PF07750 GcrA cell cycle regulator 6 45 3.5E-6 T 14-09-2016 IPR011681 GcrA cell cycle regulator AMK01_RS04725 ded0e3be17dbf990a20aded07b7333da 187 Pfam PF02632 BioY family 29 176 7.4E-37 T 14-09-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 AMK01_RS04725 ded0e3be17dbf990a20aded07b7333da 187 PANTHER PTHR34295:SF2 1 176 2.1E-55 T 14-09-2016 AMK01_RS04725 ded0e3be17dbf990a20aded07b7333da 187 PANTHER PTHR34295 1 176 2.1E-55 T 14-09-2016 AMK01_RS04725 ded0e3be17dbf990a20aded07b7333da 187 PIRSF PIRSF016661 1 182 2.1E-42 T 14-09-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 AMK01_RS15305 4cf047ab0c6148cf816ea2aa02f241e2 253 PANTHER PTHR33393 96 233 9.5E-16 T 14-09-2016 AMK01_RS15305 4cf047ab0c6148cf816ea2aa02f241e2 253 Gene3D G3DSA:2.40.260.10 109 234 8.2E-10 T 14-09-2016 IPR023365 Sortase domain AMK01_RS15305 4cf047ab0c6148cf816ea2aa02f241e2 253 SUPERFAMILY SSF63817 98 234 3.34E-19 T 14-09-2016 IPR023365 Sortase domain AMK01_RS15305 4cf047ab0c6148cf816ea2aa02f241e2 253 PANTHER PTHR33393:SF5 96 233 9.5E-16 T 14-09-2016 AMK01_RS15305 4cf047ab0c6148cf816ea2aa02f241e2 253 TIGRFAM TIGR03784 marine_sortase: sortase, marine proteobacterial type 60 230 5.5E-64 T 14-09-2016 IPR022445 Sortase, proteobacterial type AMK01_RS15305 4cf047ab0c6148cf816ea2aa02f241e2 253 Pfam PF04203 Sortase family 112 233 1.1E-18 T 14-09-2016 IPR005754 Sortase family AMK01_RS11875 cf0076da6d5c77d1a0a017572921f360 148 Pfam PF00583 Acetyltransferase (GNAT) family 58 134 1.5E-12 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS11875 cf0076da6d5c77d1a0a017572921f360 148 PANTHER PTHR10545:SF39 1 145 4.3E-50 T 14-09-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 AMK01_RS11875 cf0076da6d5c77d1a0a017572921f360 148 PANTHER PTHR10545 1 145 4.3E-50 T 14-09-2016 AMK01_RS11875 cf0076da6d5c77d1a0a017572921f360 148 Gene3D G3DSA:3.40.630.30 2 134 1.7E-31 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11875 cf0076da6d5c77d1a0a017572921f360 148 SUPERFAMILY SSF55729 5 135 1.23E-29 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 Pfam PF01189 16S rRNA methyltransferase RsmB/F 269 458 4.2E-44 T 14-09-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 PANTHER PTHR22807 67 460 5.3E-72 T 14-09-2016 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 Gene3D G3DSA:3.40.50.150 251 460 6.1E-47 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 PANTHER PTHR22807:SF30 67 460 5.3E-72 T 14-09-2016 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 Pfam PF01029 NusB family 30 155 3.7E-21 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 SUPERFAMILY SSF53335 172 460 5.0E-56 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 270 280 1.3E-21 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 255 1.3E-21 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 331 343 1.3E-21 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 381 397 1.3E-21 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 443 460 1.3E-21 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 SUPERFAMILY SSF48013 30 176 5.23E-28 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK01_RS21115 e71aec983fe6d660903d519d23357d4e 462 Gene3D G3DSA:1.10.940.10 27 176 1.4E-31 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK01_RS10030 eebecd81663e74913674f5bcdc2dbb62 195 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 29 107 4.8E-8 T 14-09-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK01_RS10030 eebecd81663e74913674f5bcdc2dbb62 195 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 60 97 - T 14-09-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK01_RS10030 eebecd81663e74913674f5bcdc2dbb62 195 PANTHER PTHR11079 9 129 4.7E-24 T 14-09-2016 AMK01_RS10030 eebecd81663e74913674f5bcdc2dbb62 195 SUPERFAMILY SSF53927 19 146 6.77E-22 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK01_RS10030 eebecd81663e74913674f5bcdc2dbb62 195 Gene3D G3DSA:3.40.140.10 19 116 1.2E-19 T 14-09-2016 AMK01_RS10030 eebecd81663e74913674f5bcdc2dbb62 195 PANTHER PTHR11079:SF67 9 129 4.7E-24 T 14-09-2016 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 SUPERFAMILY SSF47413 5 63 1.91E-15 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 SUPERFAMILY SSF53822 66 338 5.3E-74 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 PANTHER PTHR30146 4 346 1.1E-103 T 14-09-2016 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 Gene3D G3DSA:1.10.260.40 5 54 1.5E-19 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 SMART SM00354 5 77 7.6E-23 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 Gene3D G3DSA:3.40.50.2300 55 179 2.2E-38 T 14-09-2016 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 PANTHER PTHR30146:SF30 4 346 1.1E-103 T 14-09-2016 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 Gene3D G3DSA:3.40.50.2300 180 316 1.7E-47 T 14-09-2016 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 Pfam PF13377 Periplasmic binding protein-like domain 175 336 2.9E-36 T 14-09-2016 AMK01_RS08660 d26bfd9cee214ecfa3672313ed92a5fe 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 52 7.5E-16 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS19190 5534113e05592845d0da088112d8c5be 324 PANTHER PTHR23409 12 320 2.4E-105 T 14-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMK01_RS19190 5534113e05592845d0da088112d8c5be 324 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 102 118 - T 14-09-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK01_RS19190 5534113e05592845d0da088112d8c5be 324 PIRSF PIRSF000355 2 321 3.4E-80 T 14-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMK01_RS19190 5534113e05592845d0da088112d8c5be 324 Gene3D G3DSA:1.10.620.20 10 285 9.3E-92 T 14-09-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 AMK01_RS19190 5534113e05592845d0da088112d8c5be 324 SUPERFAMILY SSF47240 9 324 1.03E-103 T 14-09-2016 IPR009078 Ferritin-like superfamily AMK01_RS19190 5534113e05592845d0da088112d8c5be 324 Pfam PF00268 Ribonucleotide reductase, small chain 14 285 1.5E-82 T 14-09-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMK01_RS19190 5534113e05592845d0da088112d8c5be 324 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 12 324 6.6E-144 T 14-09-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 PANTHER PTHR22604 2 395 1.1E-71 T 14-09-2016 AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 15 142 1.9E-20 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 SUPERFAMILY SSF55347 151 335 2.29E-37 T 14-09-2016 AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 157 231 4.8E-7 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 Gene3D G3DSA:3.30.360.10 338 395 3.1E-39 T 14-09-2016 AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 Gene3D G3DSA:3.30.360.10 165 292 3.1E-39 T 14-09-2016 AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 Gene3D G3DSA:3.40.50.720 11 164 1.4E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 PANTHER PTHR22604:SF123 2 395 1.1E-71 T 14-09-2016 AMK01_RS18810 8de4988aa92b8c6206d076bae368eec7 395 SUPERFAMILY SSF51735 12 177 2.14E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 SUPERFAMILY SSF53850 91 294 2.9E-36 T 14-09-2016 AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 Pfam PF03466 LysR substrate binding domain 91 291 3.5E-34 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 PANTHER PTHR30537 1 308 4.1E-89 T 14-09-2016 AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.5E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.5E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.5E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 Gene3D G3DSA:3.40.190.10 93 177 1.6E-16 T 14-09-2016 AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 Gene3D G3DSA:3.40.190.10 178 258 9.0E-21 T 14-09-2016 AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 Gene3D G3DSA:1.10.10.10 5 83 8.5E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 SUPERFAMILY SSF46785 5 83 3.67E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14225 72314a7fa674a0b41325629d94583614 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.7E-22 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18475 97dbdf1962b2125cce981118ab7d1204 362 PANTHER PTHR30238 128 176 1.1E-115 T 14-09-2016 AMK01_RS18475 97dbdf1962b2125cce981118ab7d1204 362 Pfam PF04332 Protein of unknown function (DUF475) 61 348 6.4E-106 T 14-09-2016 IPR007427 Protein of unknown function DUF475 AMK01_RS18475 97dbdf1962b2125cce981118ab7d1204 362 PANTHER PTHR30238:SF3 14 103 1.1E-115 T 14-09-2016 AMK01_RS18475 97dbdf1962b2125cce981118ab7d1204 362 PANTHER PTHR30238:SF3 128 176 1.1E-115 T 14-09-2016 AMK01_RS18475 97dbdf1962b2125cce981118ab7d1204 362 PANTHER PTHR30238:SF3 212 359 1.1E-115 T 14-09-2016 AMK01_RS18475 97dbdf1962b2125cce981118ab7d1204 362 PANTHER PTHR30238 14 103 1.1E-115 T 14-09-2016 AMK01_RS18475 97dbdf1962b2125cce981118ab7d1204 362 PANTHER PTHR30238 212 359 1.1E-115 T 14-09-2016 AMK01_RS22845 9fc8db07904c9e95d8f91135940832db 133 PANTHER PTHR24423 1 133 8.6E-17 T 14-09-2016 AMK01_RS22845 9fc8db07904c9e95d8f91135940832db 133 SUPERFAMILY SSF55874 6 129 2.1E-21 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS22845 9fc8db07904c9e95d8f91135940832db 133 PANTHER PTHR24423:SF379 1 133 8.6E-17 T 14-09-2016 AMK01_RS22845 9fc8db07904c9e95d8f91135940832db 133 Gene3D G3DSA:3.30.565.10 9 123 7.2E-22 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS22845 9fc8db07904c9e95d8f91135940832db 133 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 59 129 6.9E-12 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS03495 b393331f5912f93ba21e86c68347a8a7 113 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 6 113 13.923 T 14-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMK01_RS03495 b393331f5912f93ba21e86c68347a8a7 113 Pfam PF02049 Flagellar hook-basal body complex protein FliE 28 113 1.5E-15 T 14-09-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 SUPERFAMILY SSF52540 261 498 6.25E-31 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 SUPERFAMILY SSF52540 12 229 1.43E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 Gene3D G3DSA:3.40.50.300 258 502 6.8E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 Gene3D G3DSA:3.40.50.300 10 230 1.9E-67 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 PANTHER PTHR24220:SF239 14 391 4.3E-153 T 14-09-2016 AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 PANTHER PTHR24220 14 391 4.3E-153 T 14-09-2016 AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 SMART SM00382 37 223 5.0E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 Pfam PF00005 ABC transporter 278 438 5.6E-8 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10680 944c8bf383cacc0d88e5cef512d5a953 522 Pfam PF00005 ABC transporter 29 173 3.4E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS09010 6f6edf44a54c2ab4f06c66a01360e115 413 SUPERFAMILY SSF103473 17 403 4.32E-65 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS09010 6f6edf44a54c2ab4f06c66a01360e115 413 PANTHER PTHR23515 18 396 5.9E-71 T 14-09-2016 AMK01_RS09010 6f6edf44a54c2ab4f06c66a01360e115 413 Gene3D G3DSA:1.20.1250.20 18 195 2.2E-23 T 14-09-2016 AMK01_RS09010 6f6edf44a54c2ab4f06c66a01360e115 413 Pfam PF07690 Major Facilitator Superfamily 23 258 9.3E-26 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS09010 6f6edf44a54c2ab4f06c66a01360e115 413 Gene3D G3DSA:1.20.1250.20 216 399 1.7E-27 T 14-09-2016 AMK01_RS09475 bb9708c93bc43e73bb13976e4a8beddc 252 Gene3D G3DSA:3.40.30.10 75 244 3.0E-41 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS09475 bb9708c93bc43e73bb13976e4a8beddc 252 PANTHER PTHR13887:SF25 17 245 3.7E-60 T 14-09-2016 AMK01_RS09475 bb9708c93bc43e73bb13976e4a8beddc 252 PANTHER PTHR13887 17 245 3.7E-60 T 14-09-2016 AMK01_RS09475 bb9708c93bc43e73bb13976e4a8beddc 252 SUPERFAMILY SSF52833 72 242 6.08E-40 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS09475 bb9708c93bc43e73bb13976e4a8beddc 252 Pfam PF01323 DSBA-like thioredoxin domain 96 240 1.3E-21 T 14-09-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 PANTHER PTHR32309:SF13 3 503 1.8E-139 T 14-09-2016 AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 PANTHER PTHR32309:SF13 520 758 1.8E-139 T 14-09-2016 AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 Gene3D G3DSA:3.40.50.300 553 734 4.3E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 Pfam PF02706 Chain length determinant protein 22 202 1.2E-22 T 14-09-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 Pfam PF13807 G-rich domain on putative tyrosine kinase 394 473 1.8E-11 T 14-09-2016 IPR032807 Tyrosine kinase, G-rich domain AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 PANTHER PTHR32309 3 503 1.8E-139 T 14-09-2016 AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 PANTHER PTHR32309 520 758 1.8E-139 T 14-09-2016 AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 SUPERFAMILY SSF52540 556 745 7.43E-31 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 Pfam PF13614 AAA domain 556 687 2.0E-12 T 14-09-2016 IPR025669 AAA domain AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 545 741 3.2E-33 T 14-09-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AMK01_RS16675 e7bb7e1f07363379aa4b24d76f425f4e 758 TIGRFAM TIGR01005 eps_transp_fam: exopolysaccharide transport protein family 23 758 1.5E-147 T 14-09-2016 IPR005700 Exopolysaccharide transport protein GO:0006859|GO:0015542 AMK01_RS19290 0ce4371d972f979caf87d873e83a3874 646 Gene3D G3DSA:2.70.70.10 467 607 1.1E-43 T 14-09-2016 AMK01_RS19290 0ce4371d972f979caf87d873e83a3874 646 Pfam PF01551 Peptidase family M23 508 605 5.1E-29 T 14-09-2016 IPR016047 Peptidase M23 AMK01_RS19290 0ce4371d972f979caf87d873e83a3874 646 SUPERFAMILY SSF51261 386 607 3.3E-58 T 14-09-2016 IPR011055 Duplicated hybrid motif AMK01_RS19290 0ce4371d972f979caf87d873e83a3874 646 PANTHER PTHR21666 493 620 4.3E-40 T 14-09-2016 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 SMART SM01018 669 752 5.0E-46 T 14-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 SUPERFAMILY SSF82282 22 412 1.06E-116 T 14-09-2016 IPR003726 Homocysteine-binding domain AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Gene3D G3DSA:3.40.50.280 761 912 3.1E-61 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Pfam PF00809 Pterin binding enzyme 373 611 4.0E-60 T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 SUPERFAMILY SSF56507 921 1246 2.62E-133 T 14-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 PANTHER PTHR21091 28 415 5.3E-163 T 14-09-2016 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 956 1228 1.0E-120 T 14-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 PIRSF PIRSF000381 16 1215 0.0 T 14-09-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Pfam PF02607 B12 binding domain 671 744 3.0E-25 T 14-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 SUPERFAMILY SSF47644 664 751 5.1E-29 T 14-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Pfam PF02310 B12 binding domain 765 855 5.4E-17 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Gene3D G3DSA:3.10.196.10 976 1254 3.4E-112 T 14-09-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Gene3D G3DSA:1.10.1240.10 663 749 3.8E-39 T 14-09-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Gene3D G3DSA:3.20.20.330 21 376 1.1E-124 T 14-09-2016 IPR003726 Homocysteine-binding domain AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 TIGRFAM TIGR02082 metH: methionine synthase 27 1212 0.0 T 14-09-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Pfam PF02574 Homocysteine S-methyltransferase 31 338 2.1E-90 T 14-09-2016 IPR003726 Homocysteine-binding domain AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 Gene3D G3DSA:3.20.20.20 377 649 3.0E-114 T 14-09-2016 IPR000489 Pterin-binding domain GO:0042558 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 SUPERFAMILY SSF51717 369 643 3.14E-89 T 14-09-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 PANTHER PTHR21091:SF111 28 415 5.3E-163 T 14-09-2016 AMK01_RS14900 cffb1f8b2c66c970acdb654f67dbdeb9 1257 SUPERFAMILY SSF52242 759 911 8.63E-44 T 14-09-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK01_RS15710 e4c3aa872c598ee74a7efcb19655d52f 318 PANTHER PTHR30177 18 291 2.9E-110 T 14-09-2016 AMK01_RS15710 e4c3aa872c598ee74a7efcb19655d52f 318 Gene3D G3DSA:3.40.190.100 128 236 2.6E-17 T 14-09-2016 AMK01_RS15710 e4c3aa872c598ee74a7efcb19655d52f 318 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 287 2.3E-53 T 14-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AMK01_RS15710 e4c3aa872c598ee74a7efcb19655d52f 318 Gene3D G3DSA:3.40.190.10 27 115 2.4E-44 T 14-09-2016 AMK01_RS15710 e4c3aa872c598ee74a7efcb19655d52f 318 Gene3D G3DSA:3.40.190.10 237 303 2.4E-44 T 14-09-2016 AMK01_RS15710 e4c3aa872c598ee74a7efcb19655d52f 318 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 25 315 7.9E-142 T 14-09-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 AMK01_RS15710 e4c3aa872c598ee74a7efcb19655d52f 318 SUPERFAMILY SSF53850 27 303 2.17E-83 T 14-09-2016 AMK01_RS15710 e4c3aa872c598ee74a7efcb19655d52f 318 PANTHER PTHR30177:SF6 18 291 2.9E-110 T 14-09-2016 AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 120 199 1.5E-10 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 PANTHER PTHR12725 10 234 2.5E-26 T 14-09-2016 AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 Gene3D G3DSA:3.40.50.1000 7 21 6.8E-31 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 Gene3D G3DSA:3.40.50.1000 105 235 6.8E-31 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 PANTHER PTHR12725:SF40 10 234 2.5E-26 T 14-09-2016 AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 3.3E-5 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 165 3.3E-5 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 118 131 3.3E-5 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 SUPERFAMILY SSF56784 6 236 2.88E-41 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04315 22763258fdbddb7dd844ec5f0bb7389a 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 104 200 4.5E-17 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS08540 09cfec8969b3e7d50e9718a38971e9fb 69 Pfam PF00327 Ribosomal protein L30p/L7e 15 63 5.3E-13 T 14-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK01_RS08540 09cfec8969b3e7d50e9718a38971e9fb 69 PANTHER PTHR15892 10 69 5.3E-15 T 14-09-2016 AMK01_RS08540 09cfec8969b3e7d50e9718a38971e9fb 69 SUPERFAMILY SSF55129 11 65 2.49E-17 T 14-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK01_RS08540 09cfec8969b3e7d50e9718a38971e9fb 69 Gene3D G3DSA:3.30.1390.20 10 67 3.7E-25 T 14-09-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK01_RS08540 09cfec8969b3e7d50e9718a38971e9fb 69 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 13 66 5.6E-23 T 14-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS08540 09cfec8969b3e7d50e9718a38971e9fb 69 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 10 67 16.314 T 14-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS08540 09cfec8969b3e7d50e9718a38971e9fb 69 PANTHER PTHR15892:SF2 10 69 5.3E-15 T 14-09-2016 AMK01_RS08540 09cfec8969b3e7d50e9718a38971e9fb 69 PIRSF PIRSF002211 7 69 1.8E-20 T 14-09-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 PANTHER PTHR10169:SF48 16 424 0.0 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 PANTHER PTHR10169:SF48 796 873 0.0 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 852 899 1.9E-10 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 636 8.5E-5 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 800 849 2.3E-10 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 8.9E-7 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 695 742 7.1E-13 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 1.6E-13 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 11 902 27.712 T 14-09-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Gene3D G3DSA:3.30.1360.40 244 340 1.1E-39 T 14-09-2016 IPR024946 Arginine repressor C-terminal-like domain AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 PANTHER PTHR10169 796 873 0.0 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 505 1.3E-150 T 14-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 SUPERFAMILY SSF101904 532 744 1.01E-94 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 SUPERFAMILY SSF101904 797 911 1.01E-94 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 SMART SM00434 19 498 1.4E-276 T 14-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 PANTHER PTHR10169:SF48 449 742 0.0 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Gene3D G3DSA:1.10.268.10 371 494 2.5E-41 T 14-09-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Gene3D G3DSA:3.90.199.10 42 224 3.0E-80 T 14-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 PANTHER PTHR10169 16 424 0.0 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 PANTHER PTHR10169 449 742 0.0 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 SUPERFAMILY SSF56719 38 521 1.18E-178 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Gene3D G3DSA:2.120.10.90 797 899 4.5E-114 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 Gene3D G3DSA:2.120.10.90 529 743 4.5E-114 T 14-09-2016 AMK01_RS10830 e7ec349829fa10a5e33cc269fbc7b614 929 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 16 899 0.0 T 14-09-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK01_RS20190 fda40cfae9d8dd28a27608afe70d737f 317 Gene3D G3DSA:3.40.50.2300 151 283 1.8E-49 T 14-09-2016 AMK01_RS20190 fda40cfae9d8dd28a27608afe70d737f 317 Pfam PF04392 ABC transporter substrate binding protein 24 315 6.6E-104 T 14-09-2016 IPR007487 ABC transporter, substrate-binding protein AMK01_RS20190 fda40cfae9d8dd28a27608afe70d737f 317 SUPERFAMILY SSF53822 40 291 4.21E-16 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS20190 fda40cfae9d8dd28a27608afe70d737f 317 Gene3D G3DSA:3.40.50.2300 23 150 6.3E-55 T 14-09-2016 AMK01_RS20190 fda40cfae9d8dd28a27608afe70d737f 317 PANTHER PTHR35271 1 317 6.0E-71 T 14-09-2016 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 Pfam PF00152 tRNA synthetases class II (D, K and N) 155 492 6.5E-79 T 14-09-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 PANTHER PTHR22594:SF4 12 498 7.8E-220 T 14-09-2016 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 Pfam PF01336 OB-fold nucleic acid binding domain 63 138 8.5E-13 T 14-09-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 Gene3D G3DSA:2.40.50.140 14 147 3.2E-39 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 255 272 2.2E-28 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 378 394 2.2E-28 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 2.2E-28 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 2.2E-28 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 237 250 2.2E-28 T 14-09-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 12 495 3.4E-175 T 14-09-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 SUPERFAMILY SSF50249 13 147 6.86E-32 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 PANTHER PTHR22594 12 498 7.8E-220 T 14-09-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 496 39.637 T 14-09-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 SUPERFAMILY SSF55681 154 493 5.97E-109 T 14-09-2016 AMK01_RS18885 99be6f923bb07c67de83c5de38ededc4 498 Gene3D G3DSA:3.30.930.10 149 491 2.0E-117 T 14-09-2016 AMK01_RS19775 93f2a79574a8887a049730d0af7a871c 404 Gene3D G3DSA:3.90.1150.10 281 393 7.9E-27 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS19775 93f2a79574a8887a049730d0af7a871c 404 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 401 4.7E-211 T 14-09-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 AMK01_RS19775 93f2a79574a8887a049730d0af7a871c 404 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 14-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AMK01_RS19775 93f2a79574a8887a049730d0af7a871c 404 PANTHER PTHR13693:SF57 2 401 3.7E-230 T 14-09-2016 AMK01_RS19775 93f2a79574a8887a049730d0af7a871c 404 PANTHER PTHR13693 2 401 3.7E-230 T 14-09-2016 AMK01_RS19775 93f2a79574a8887a049730d0af7a871c 404 Gene3D G3DSA:3.40.640.10 63 280 1.2E-87 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS19775 93f2a79574a8887a049730d0af7a871c 404 Pfam PF00155 Aminotransferase class I and II 46 390 2.3E-81 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS19775 93f2a79574a8887a049730d0af7a871c 404 SUPERFAMILY SSF53383 3 396 2.82E-113 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS17950 3d373670539d43844b4cf9c870f233a8 83 SUPERFAMILY SSF89447 2 45 1.96E-10 T 14-09-2016 AMK01_RS17950 3d373670539d43844b4cf9c870f233a8 83 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 2 41 1.6E-10 T 14-09-2016 IPR007159 SpoVT-AbrB domain GO:0003677 AMK01_RS17950 3d373670539d43844b4cf9c870f233a8 83 Gene3D G3DSA:2.10.260.10 2 40 2.1E-9 T 14-09-2016 AMK01_RS17950 3d373670539d43844b4cf9c870f233a8 83 SMART SM00966 1 48 1.2E-10 T 14-09-2016 IPR007159 SpoVT-AbrB domain GO:0003677 AMK01_RS17950 3d373670539d43844b4cf9c870f233a8 83 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 2 41 4.2E-11 T 14-09-2016 IPR007159 SpoVT-AbrB domain GO:0003677 AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 Pfam PF08402 TOBE domain 276 350 2.2E-10 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 SUPERFAMILY SSF52540 4 244 9.94E-89 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 SUPERFAMILY SSF50331 237 349 2.25E-11 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 PANTHER PTHR24220:SF150 5 244 2.3E-128 T 14-09-2016 AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 Gene3D G3DSA:3.40.50.300 4 233 2.0E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 Pfam PF00005 ABC transporter 19 161 2.8E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 SMART SM00382 28 211 4.6E-20 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS14850 a35220c8f6e7f22832c6ac288ce41b5e 353 PANTHER PTHR24220 5 244 2.3E-128 T 14-09-2016 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 Gene3D G3DSA:4.10.520.10 5 96 1.6E-28 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 SUPERFAMILY SSF47729 6 94 1.91E-26 T 14-09-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 PANTHER PTHR33175 6 94 8.8E-44 T 14-09-2016 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 5 96 3.3E-41 T 14-09-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 Pfam PF00216 Bacterial DNA-binding protein 6 94 8.4E-26 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 7.3E-12 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 7.3E-12 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 7.3E-12 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 4 100 28.153 T 14-09-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 SMART SM00411 6 95 6.4E-27 T 14-09-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 PANTHER PTHR33175:SF2 6 94 8.8E-44 T 14-09-2016 AMK01_RS07760 06ca2781e333195efc04152002b0e74a 112 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 14-09-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 SUPERFAMILY SSF53067 101 394 3.66E-34 T 14-09-2016 AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 PANTHER PTHR18964 77 394 1.1E-21 T 14-09-2016 AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 PANTHER PTHR18964:SF108 77 394 1.1E-21 T 14-09-2016 AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 Gene3D G3DSA:3.30.420.40 97 240 6.0E-24 T 14-09-2016 AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 Pfam PF00480 ROK family 103 392 1.4E-18 T 14-09-2016 IPR000600 ROK family AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 SUPERFAMILY SSF46785 29 95 6.83E-12 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 Pfam PF13412 Winged helix-turn-helix DNA-binding 32 75 2.9E-7 T 14-09-2016 AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 Gene3D G3DSA:1.10.10.10 28 96 7.0E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02515 98f6d426f0599eaac549a15983fb8111 415 Gene3D G3DSA:3.30.420.40 241 349 4.2E-15 T 14-09-2016 AMK01_RS09755 beb25e5c91fb07112a67a7216fdcd681 389 PANTHER PTHR30372 5 382 4.5E-71 T 14-09-2016 AMK01_RS09755 beb25e5c91fb07112a67a7216fdcd681 389 PANTHER PTHR30372:SF0 5 382 4.5E-71 T 14-09-2016 AMK01_RS09755 beb25e5c91fb07112a67a7216fdcd681 389 SUPERFAMILY SSF53756 7 314 5.49E-17 T 14-09-2016 AMK01_RS09755 beb25e5c91fb07112a67a7216fdcd681 389 Pfam PF02684 Lipid-A-disaccharide synthetase 8 330 1.7E-76 T 14-09-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK01_RS09755 beb25e5c91fb07112a67a7216fdcd681 389 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 367 4.0E-64 T 14-09-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 Gene3D G3DSA:3.40.50.150 30 257 3.9E-59 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 PANTHER PTHR10108:SF24 13 258 3.2E-125 T 14-09-2016 AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 41 56 - T 14-09-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 165 179 - T 14-09-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 PANTHER PTHR10108 13 258 3.2E-125 T 14-09-2016 AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 SUPERFAMILY SSF53335 25 254 1.38E-45 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 Pfam PF01209 ubiE/COQ5 methyltransferase family 27 257 2.0E-87 T 14-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 21 257 37.543 T 14-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK01_RS01945 ed39f69dc0f389463355d3789a6e7d81 258 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 30 257 1.1E-81 T 14-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.447 T 14-09-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 PANTHER PTHR11609 3 240 1.9E-115 T 14-09-2016 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 239 5.5E-68 T 14-09-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 PANTHER PTHR11609:SF2 3 240 1.9E-115 T 14-09-2016 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-09-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 Gene3D G3DSA:3.30.200.20 7 93 6.6E-38 T 14-09-2016 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 Pfam PF01259 SAICAR synthetase 6 235 4.1E-61 T 14-09-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 SUPERFAMILY SSF56104 5 236 7.19E-79 T 14-09-2016 AMK01_RS11670 b720b0a6bd36d6f8626f2e358c10de07 254 Gene3D G3DSA:3.30.470.20 94 223 3.2E-51 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS25920 6bc34de609bcb66cd3c999a8d7756d74 167 PANTHER PTHR10366 10 167 9.6E-65 T 14-09-2016 AMK01_RS25920 6bc34de609bcb66cd3c999a8d7756d74 167 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 165 1.7E-26 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS25920 6bc34de609bcb66cd3c999a8d7756d74 167 SUPERFAMILY SSF51735 7 166 6.18E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS25920 6bc34de609bcb66cd3c999a8d7756d74 167 PANTHER PTHR10366:SF33 10 167 9.6E-65 T 14-09-2016 AMK01_RS25920 6bc34de609bcb66cd3c999a8d7756d74 167 Gene3D G3DSA:3.90.25.10 144 166 6.0E-5 T 14-09-2016 AMK01_RS25920 6bc34de609bcb66cd3c999a8d7756d74 167 Gene3D G3DSA:3.40.50.720 11 143 7.2E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 SUPERFAMILY SSF53067 213 393 3.02E-22 T 14-09-2016 AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 PANTHER PTHR18964 60 378 2.3E-24 T 14-09-2016 AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 SUPERFAMILY SSF53067 81 200 2.45E-9 T 14-09-2016 AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 Gene3D G3DSA:1.10.10.10 8 76 9.8E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 PANTHER PTHR18964:SF109 60 378 2.3E-24 T 14-09-2016 AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 Pfam PF00480 ROK family 116 356 6.1E-16 T 14-09-2016 IPR000600 ROK family AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 Gene3D G3DSA:3.30.420.40 224 373 7.0E-23 T 14-09-2016 AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 Pfam PF13412 Winged helix-turn-helix DNA-binding 18 58 6.1E-5 T 14-09-2016 AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 SUPERFAMILY SSF46785 9 75 5.97E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16150 be72ff1d28a3783155918c2426bd675e 407 Gene3D G3DSA:3.30.420.40 81 223 2.1E-17 T 14-09-2016 AMK01_RS09255 0172093fd31792cda5f38bd1df131877 115 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 4.3E-15 T 14-09-2016 IPR003849 Preprotein translocase YajC AMK01_RS09255 0172093fd31792cda5f38bd1df131877 115 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 4.3E-15 T 14-09-2016 IPR003849 Preprotein translocase YajC AMK01_RS09255 0172093fd31792cda5f38bd1df131877 115 PANTHER PTHR33909:SF1 1 108 1.3E-25 T 14-09-2016 AMK01_RS09255 0172093fd31792cda5f38bd1df131877 115 Pfam PF02699 Preprotein translocase subunit 25 101 4.8E-25 T 14-09-2016 IPR003849 Preprotein translocase YajC AMK01_RS09255 0172093fd31792cda5f38bd1df131877 115 SMART SM01323 21 104 1.1E-37 T 14-09-2016 IPR003849 Preprotein translocase YajC AMK01_RS09255 0172093fd31792cda5f38bd1df131877 115 PANTHER PTHR33909 1 108 1.3E-25 T 14-09-2016 AMK01_RS09255 0172093fd31792cda5f38bd1df131877 115 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 23 103 5.5E-23 T 14-09-2016 IPR003849 Preprotein translocase YajC AMK01_RS14895 a6344bd2457e6088b3945c86446ff4c6 77 Gene3D G3DSA:3.40.1620.10 3 40 8.9E-8 T 14-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK01_RS14895 a6344bd2457e6088b3945c86446ff4c6 77 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 40 1.5E-5 T 14-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK01_RS14895 a6344bd2457e6088b3945c86446ff4c6 77 SUPERFAMILY SSF143120 2 40 1.31E-8 T 14-09-2016 AMK01_RS14895 a6344bd2457e6088b3945c86446ff4c6 77 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 40 1.2E-8 T 14-09-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK01_RS10905 52eb4494beab5fadf1448b890dc8d9e2 341 PANTHER PTHR30006:SF2 16 339 2.2E-72 T 14-09-2016 AMK01_RS10905 52eb4494beab5fadf1448b890dc8d9e2 341 Gene3D G3DSA:3.40.190.10 130 266 3.8E-43 T 14-09-2016 AMK01_RS10905 52eb4494beab5fadf1448b890dc8d9e2 341 PIRSF PIRSF002825 1 337 3.3E-61 T 14-09-2016 IPR026045 Ferric binding protein AMK01_RS10905 52eb4494beab5fadf1448b890dc8d9e2 341 Pfam PF13343 Bacterial extracellular solute-binding protein 73 316 5.4E-33 T 14-09-2016 AMK01_RS10905 52eb4494beab5fadf1448b890dc8d9e2 341 Gene3D G3DSA:3.40.190.10 267 322 2.2E-37 T 14-09-2016 AMK01_RS10905 52eb4494beab5fadf1448b890dc8d9e2 341 Gene3D G3DSA:3.40.190.10 1 129 2.2E-37 T 14-09-2016 AMK01_RS10905 52eb4494beab5fadf1448b890dc8d9e2 341 SUPERFAMILY SSF53850 22 334 1.09E-73 T 14-09-2016 AMK01_RS10905 52eb4494beab5fadf1448b890dc8d9e2 341 PANTHER PTHR30006 16 339 2.2E-72 T 14-09-2016 AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 Pfam PF08482 ATP-dependent helicase C-terminal 676 807 5.9E-47 T 14-09-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 Gene3D G3DSA:3.40.50.300 208 347 6.3E-16 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 SMART SM00487 8 193 3.3E-20 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 PANTHER PTHR18934 10 462 1.1E-145 T 14-09-2016 AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 PANTHER PTHR18934 722 726 1.1E-145 T 14-09-2016 AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 PIRSF PIRSF005496 5 821 0.0 T 14-09-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 SMART SM00847 395 484 8.0E-13 T 14-09-2016 IPR007502 Helicase-associated domain GO:0004386 AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 Pfam PF04408 Helicase associated domain (HA2) 396 454 2.4E-8 T 14-09-2016 IPR007502 Helicase-associated domain GO:0004386 AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 Pfam PF00271 Helicase conserved C-terminal domain 214 334 8.4E-14 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 SUPERFAMILY SSF52540 22 346 2.85E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 Gene3D G3DSA:3.40.50.300 9 168 2.1E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 SMART SM00490 233 335 8.9E-19 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 Pfam PF00270 DEAD/DEAH box helicase 22 171 5.4E-8 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS00295 c4d610a7dd4303eaff2c94c4d81e25c0 821 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 10 820 1.1E-300 T 14-09-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AMK01_RS12505 0cef1621d775ee777a5370a02f749e3e 231 PANTHER PTHR41535:SF1 1 231 2.8E-17 T 14-09-2016 AMK01_RS12505 0cef1621d775ee777a5370a02f749e3e 231 Pfam PF13975 gag-polyprotein putative aspartyl protease 125 215 1.4E-25 T 14-09-2016 AMK01_RS12505 0cef1621d775ee777a5370a02f749e3e 231 SUPERFAMILY SSF50630 114 218 7.64E-19 T 14-09-2016 IPR021109 Aspartic peptidase domain AMK01_RS12505 0cef1621d775ee777a5370a02f749e3e 231 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 112 230 3.0E-44 T 14-09-2016 IPR011969 Clan AA aspartic peptidase, C-terminal AMK01_RS12505 0cef1621d775ee777a5370a02f749e3e 231 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 135 146 - T 14-09-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMK01_RS12505 0cef1621d775ee777a5370a02f749e3e 231 PANTHER PTHR41535 1 231 2.8E-17 T 14-09-2016 AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 PANTHER PTHR11544 1 71 1.2E-19 T 14-09-2016 AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 Gene3D G3DSA:2.40.50.140 3 69 1.4E-25 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 PRINTS PR00050 Cold shock protein signature 5 20 3.3E-11 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 PRINTS PR00050 Cold shock protein signature 26 35 3.3E-11 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 PRINTS PR00050 Cold shock protein signature 41 59 3.3E-11 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 5.1E-23 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 PIRSF PIRSF002599 1 71 1.0E-20 T 14-09-2016 IPR012156 Cold shock, CspA GO:0003676 AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 SMART SM00357 4 70 6.2E-24 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 14-09-2016 IPR019844 Cold-shock conserved site AMK01_RS15325 f965cf2179769ac398847e3f5a143c5d 71 SUPERFAMILY SSF50249 2 69 9.86E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS26065 8cbba22093c2adefa099794e74dd9af5 120 Pfam PF00248 Aldo/keto reductase family 6 120 3.6E-29 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS26065 8cbba22093c2adefa099794e74dd9af5 120 SUPERFAMILY SSF51430 5 120 1.05E-36 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS26065 8cbba22093c2adefa099794e74dd9af5 120 PANTHER PTHR11732 1 120 4.6E-56 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS26065 8cbba22093c2adefa099794e74dd9af5 120 PANTHER PTHR11732:SF215 1 120 4.6E-56 T 14-09-2016 AMK01_RS26065 8cbba22093c2adefa099794e74dd9af5 120 Gene3D G3DSA:3.20.20.100 6 120 2.2E-39 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS08815 b185c8ed5f66a7311dcf611d88b9ea35 341 PANTHER PTHR11820 10 267 1.5E-137 T 14-09-2016 AMK01_RS08815 b185c8ed5f66a7311dcf611d88b9ea35 341 PANTHER PTHR11820:SF85 283 336 1.5E-137 T 14-09-2016 AMK01_RS08815 b185c8ed5f66a7311dcf611d88b9ea35 341 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 332 6.3E-39 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS08815 b185c8ed5f66a7311dcf611d88b9ea35 341 SUPERFAMILY SSF56529 76 333 7.33E-57 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS08815 b185c8ed5f66a7311dcf611d88b9ea35 341 PANTHER PTHR11820:SF85 10 267 1.5E-137 T 14-09-2016 AMK01_RS08815 b185c8ed5f66a7311dcf611d88b9ea35 341 Gene3D G3DSA:3.90.850.10 305 318 6.2E-40 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS08815 b185c8ed5f66a7311dcf611d88b9ea35 341 Gene3D G3DSA:3.90.850.10 67 269 6.2E-40 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS08815 b185c8ed5f66a7311dcf611d88b9ea35 341 PANTHER PTHR11820 283 336 1.5E-137 T 14-09-2016 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.374 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 6.5E-35 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 6.5E-35 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 6.5E-35 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 85 4.0E-21 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 PANTHER PTHR15893 1 86 7.5E-47 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 1.5E-37 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-09-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 Gene3D G3DSA:2.40.50.100 20 83 1.1E-31 T 14-09-2016 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 SUPERFAMILY SSF110324 2 83 1.78E-34 T 14-09-2016 AMK01_RS20875 480e3caed01b881cf473599b28c403a0 89 Pfam PF01016 Ribosomal L27 protein 2 81 4.1E-39 T 14-09-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 PANTHER PTHR11014 1 385 5.7E-160 T 14-09-2016 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 PIRSF PIRSF005962 2 387 3.6E-129 T 14-09-2016 IPR017439 Amidohydrolase GO:0016787 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 Pfam PF01546 Peptidase family M20/M25/M40 75 382 1.9E-38 T 14-09-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 Gene3D G3DSA:3.30.70.360 183 299 3.2E-44 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 372 2.3E-108 T 14-09-2016 IPR017439 Amidohydrolase GO:0016787 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 Gene3D G3DSA:3.40.630.10 300 385 1.4E-96 T 14-09-2016 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 Gene3D G3DSA:3.40.630.10 3 180 1.4E-96 T 14-09-2016 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 PANTHER PTHR11014:SF63 1 385 5.7E-160 T 14-09-2016 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 Pfam PF07687 Peptidase dimerisation domain 187 279 2.0E-12 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 SUPERFAMILY SSF55031 183 301 5.89E-32 T 14-09-2016 IPR011650 Peptidase M20, dimerisation domain AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 SUPERFAMILY SSF53187 300 385 1.03E-86 T 14-09-2016 AMK01_RS19705 ac6bae7469ef7bfc56ca05ab9bfbb116 387 SUPERFAMILY SSF53187 2 199 1.03E-86 T 14-09-2016 AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 SMART SM00851 18 112 4.3E-21 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 PANTHER PTHR30492 8 126 1.2E-51 T 14-09-2016 AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 Pfam PF02142 MGS-like domain 19 111 3.4E-16 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 Gene3D G3DSA:3.40.50.1380 3 124 5.0E-51 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 ProSitePatterns PS01335 Methylglyoxal synthase active site. 59 67 - T 14-09-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 5 122 1.8E-45 T 14-09-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 PIRSF PIRSF006614 1 126 1.7E-52 T 14-09-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 SUPERFAMILY SSF52335 2 121 1.74E-44 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS01020 51d056a50b147ef33a82b00fd035032a 126 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 5 125 29.965 T 14-09-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 PIRSF PIRSF000446 1 313 5.0E-95 T 14-09-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 292 8.3E-96 T 14-09-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 Gene3D G3DSA:3.30.70.250 127 198 2.7E-27 T 14-09-2016 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 PANTHER PTHR10982 1 308 1.1E-135 T 14-09-2016 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 314 8.5E-40 T 14-09-2016 IPR020801 Polyketide synthase, acyl transferase domain AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 SUPERFAMILY SSF55048 132 199 2.22E-16 T 14-09-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 Gene3D G3DSA:3.40.366.10 199 301 1.7E-68 T 14-09-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 Gene3D G3DSA:3.40.366.10 2 124 1.7E-68 T 14-09-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 SUPERFAMILY SSF52151 192 312 8.37E-75 T 14-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 SUPERFAMILY SSF52151 2 124 8.37E-75 T 14-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK01_RS07385 23de68474ae5db3480d6245401395e93 314 Pfam PF00698 Acyl transferase domain 5 270 2.4E-37 T 14-09-2016 IPR014043 Acyl transferase AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 PANTHER PTHR30055 103 181 1.1E-18 T 14-09-2016 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 PANTHER PTHR30055 7 86 1.1E-18 T 14-09-2016 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 Gene3D G3DSA:1.10.357.10 60 226 1.7E-52 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 SUPERFAMILY SSF46689 11 85 2.21E-18 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 Gene3D G3DSA:1.10.10.60 11 59 2.8E-20 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 PANTHER PTHR30055:SF73 103 181 1.1E-18 T 14-09-2016 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 PANTHER PTHR30055:SF73 7 86 1.1E-18 T 14-09-2016 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 68 1.1E-11 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 Pfam PF09209 Domain of unknown function (DUF1956) 107 225 2.3E-39 T 14-09-2016 IPR015292 Transcription regulator YbiH, C-terminal AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 SUPERFAMILY SSF48498 103 226 1.78E-35 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 8.4E-6 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS16760 1d41dea092bb9f68af6f31043d65645f 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 8.4E-6 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS03030 b487d366d4b9fd72e39ff674d117762b 312 SMART SM00849 79 287 1.9E-20 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS03030 b487d366d4b9fd72e39ff674d117762b 312 Gene3D G3DSA:3.60.15.10 22 307 1.5E-47 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS03030 b487d366d4b9fd72e39ff674d117762b 312 SUPERFAMILY SSF56281 22 310 2.36E-48 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS03030 b487d366d4b9fd72e39ff674d117762b 312 Pfam PF00753 Metallo-beta-lactamase superfamily 81 287 7.8E-23 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS03030 b487d366d4b9fd72e39ff674d117762b 312 PANTHER PTHR23200:SF33 16 312 4.9E-174 T 14-09-2016 AMK01_RS03030 b487d366d4b9fd72e39ff674d117762b 312 PANTHER PTHR23200 16 312 4.9E-174 T 14-09-2016 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 PANTHER PTHR30592 1 265 1.5E-90 T 14-09-2016 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 PIRSF PIRSF015626 3 268 2.4E-76 T 14-09-2016 IPR003786 Protein FdhD GO:0016783 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 SUPERFAMILY SSF53927 9 265 1.44E-77 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 26 266 6.4E-58 T 14-09-2016 IPR003786 Protein FdhD GO:0016783 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 Hamap MF_00187 Protein FdhD [fdhD]. 1 266 31.284 T 14-09-2016 IPR003786 Protein FdhD GO:0016783 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 Pfam PF02634 FdhD/NarQ family 28 265 1.5E-75 T 14-09-2016 IPR003786 Protein FdhD GO:0016783 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 Gene3D G3DSA:3.40.140.10 130 265 1.0E-46 T 14-09-2016 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 Gene3D G3DSA:3.10.20.10 29 114 9.1E-28 T 14-09-2016 AMK01_RS19825 a9ee901ad54709a3833033cf6d57d532 274 PANTHER PTHR30592:SF1 1 265 1.5E-90 T 14-09-2016 AMK01_RS14590 dd4b7b9521d178f25571d3f9c9755645 310 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 60 293 22.844 T 14-09-2016 IPR026579 Cell division protein FtsQ GO:0000917 AMK01_RS14590 dd4b7b9521d178f25571d3f9c9755645 310 Pfam PF08478 POTRA domain, FtsQ-type 90 158 5.4E-19 T 14-09-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type AMK01_RS14590 dd4b7b9521d178f25571d3f9c9755645 310 PANTHER PTHR35851 7 300 6.0E-36 T 14-09-2016 AMK01_RS14590 dd4b7b9521d178f25571d3f9c9755645 310 PANTHER PTHR35851:SF1 7 300 6.0E-36 T 14-09-2016 AMK01_RS14590 dd4b7b9521d178f25571d3f9c9755645 310 Pfam PF03799 Cell division protein FtsQ 162 275 2.3E-16 T 14-09-2016 IPR005548 Cell division protein FtsQ/DivIB AMK01_RS00055 3f345ff6b8128d0c8b87ca36a0689411 189 SUPERFAMILY SSF160443 96 181 3.92E-16 T 14-09-2016 IPR002625 Smr domain AMK01_RS00055 3f345ff6b8128d0c8b87ca36a0689411 189 PANTHER PTHR35562:SF2 1 188 1.8E-23 T 14-09-2016 AMK01_RS00055 3f345ff6b8128d0c8b87ca36a0689411 189 Pfam PF01713 Smr domain 99 181 1.8E-20 T 14-09-2016 IPR002625 Smr domain AMK01_RS00055 3f345ff6b8128d0c8b87ca36a0689411 189 SMART SM00463 96 182 2.9E-4 T 14-09-2016 IPR002625 Smr domain AMK01_RS00055 3f345ff6b8128d0c8b87ca36a0689411 189 PANTHER PTHR35562 1 188 1.8E-23 T 14-09-2016 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 271 617 1.5E-107 T 14-09-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 SUPERFAMILY SSF55545 140 270 3.49E-7 T 14-09-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 SUPERFAMILY SSF51445 271 627 3.3E-116 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PANTHER PTHR22600 347 626 3.6E-138 T 14-09-2016 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PANTHER PTHR22600 216 331 3.6E-138 T 14-09-2016 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 Gene3D G3DSA:3.30.379.10 139 251 2.4E-5 T 14-09-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PANTHER PTHR22600:SF21 347 626 3.6E-138 T 14-09-2016 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PANTHER PTHR22600:SF21 216 331 3.6E-138 T 14-09-2016 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PRINTS PR00738 Glycosyl hydrolase family 20 signature 265 282 6.3E-45 T 14-09-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PRINTS PR00738 Glycosyl hydrolase family 20 signature 581 597 6.3E-45 T 14-09-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PRINTS PR00738 Glycosyl hydrolase family 20 signature 294 315 6.3E-45 T 14-09-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PRINTS PR00738 Glycosyl hydrolase family 20 signature 364 381 6.3E-45 T 14-09-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PRINTS PR00738 Glycosyl hydrolase family 20 signature 226 246 6.3E-45 T 14-09-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PRINTS PR00738 Glycosyl hydrolase family 20 signature 413 431 6.3E-45 T 14-09-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PRINTS PR00738 Glycosyl hydrolase family 20 signature 435 448 6.3E-45 T 14-09-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 PRINTS PR00738 Glycosyl hydrolase family 20 signature 599 616 6.3E-45 T 14-09-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AMK01_RS19045 e78628cc6b5bd5912196da25f341699d 636 Gene3D G3DSA:3.20.20.80 269 630 1.4E-122 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS21170 89518d673ffc8ddfc7c5abe44dcaff12 264 PANTHER PTHR13696:SF52 3 262 5.3E-85 T 14-09-2016 AMK01_RS21170 89518d673ffc8ddfc7c5abe44dcaff12 264 Gene3D G3DSA:3.40.50.300 7 260 5.5E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21170 89518d673ffc8ddfc7c5abe44dcaff12 264 PANTHER PTHR13696 3 262 5.3E-85 T 14-09-2016 AMK01_RS21170 89518d673ffc8ddfc7c5abe44dcaff12 264 Pfam PF13614 AAA domain 7 183 4.9E-59 T 14-09-2016 IPR025669 AAA domain AMK01_RS21170 89518d673ffc8ddfc7c5abe44dcaff12 264 SUPERFAMILY SSF52540 7 258 1.49E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 PRINTS PR01021 OMPA domain signature 118 134 6.3E-16 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 PRINTS PR01021 OMPA domain signature 73 95 6.3E-16 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 PRINTS PR01021 OMPA domain signature 103 118 6.3E-16 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 PANTHER PTHR30128 61 172 6.3E-51 T 14-09-2016 AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 Gene3D G3DSA:3.30.1330.60 61 170 5.7E-36 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 Pfam PF00691 OmpA family 72 167 1.1E-21 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 PANTHER PTHR30128:SF18 61 172 6.3E-51 T 14-09-2016 AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 172 4.9E-43 T 14-09-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 SUPERFAMILY SSF103088 61 173 8.11E-36 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS17865 026218acf89a95ecb034607af3db5002 178 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 14-09-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 SMART SM00382 36 227 1.3E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 PANTHER PTHR24220 13 320 2.3E-144 T 14-09-2016 AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 SUPERFAMILY SSF52540 12 250 1.64E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 SUPERFAMILY SSF50331 244 368 3.64E-26 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 Gene3D G3DSA:2.40.50.100 354 367 5.6E-9 T 14-09-2016 AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 Gene3D G3DSA:2.40.50.100 247 293 5.6E-9 T 14-09-2016 AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 PANTHER PTHR24220:SF151 13 320 2.3E-144 T 14-09-2016 AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 Pfam PF08402 TOBE domain 289 360 2.3E-9 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 Pfam PF00005 ABC transporter 27 169 3.7E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 Gene3D G3DSA:2.40.50.140 294 353 1.6E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS12570 65e13ab06173a68c79d6fc76c90a1dc1 368 Gene3D G3DSA:3.40.50.300 9 242 4.9E-76 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 2.6E-7 T 14-09-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 SUPERFAMILY SSF55120 11 225 2.73E-72 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 183 243 1.4E-12 T 14-09-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 13 221 5.3E-64 T 14-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 12 309 17.998 T 14-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 34 182 3.4E-50 T 14-09-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 Gene3D G3DSA:2.30.130.10 251 310 6.4E-4 T 14-09-2016 IPR015947 PUA-like domain AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 PANTHER PTHR13767 8 309 1.5E-107 T 14-09-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS00720 2e5a80dd891291723a92f9dd7f22158c 310 PANTHER PTHR13767:SF2 8 309 1.5E-107 T 14-09-2016 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.7E-17 T 14-09-2016 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 1 23 1.7E-17 T 14-09-2016 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 142 157 1.7E-17 T 14-09-2016 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.7E-17 T 14-09-2016 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 Gene3D G3DSA:3.50.50.60 4 168 8.5E-36 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 Gene3D G3DSA:3.50.50.60 267 344 8.5E-36 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 PANTHER PTHR13789 2 365 1.4E-105 T 14-09-2016 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 PANTHER PTHR13789:SF174 2 365 1.4E-105 T 14-09-2016 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 Pfam PF01494 FAD binding domain 283 340 7.5E-9 T 14-09-2016 IPR002938 FAD-binding domain GO:0071949 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 Pfam PF01494 FAD binding domain 4 161 2.7E-6 T 14-09-2016 IPR002938 FAD-binding domain GO:0071949 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 SUPERFAMILY SSF51905 4 163 1.3E-44 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS13050 e6c8f41ed13a92999209094814d1416c 376 SUPERFAMILY SSF51905 266 356 1.3E-44 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS15970 e95d1c9c2aee92ee5b38452ba54f5448 588 Pfam PF01145 SPFH domain / Band 7 family 33 182 1.4E-16 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS15970 e95d1c9c2aee92ee5b38452ba54f5448 588 Pfam PF15975 Flotillin 412 531 1.9E-33 T 14-09-2016 IPR031905 Flotillin, C-terminal domain AMK01_RS15970 e95d1c9c2aee92ee5b38452ba54f5448 588 PANTHER PTHR13806:SF2 1 352 1.1E-162 T 14-09-2016 AMK01_RS15970 e95d1c9c2aee92ee5b38452ba54f5448 588 PANTHER PTHR13806:SF2 368 531 1.1E-162 T 14-09-2016 AMK01_RS15970 e95d1c9c2aee92ee5b38452ba54f5448 588 SUPERFAMILY SSF117892 55 182 4.45E-21 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS15970 e95d1c9c2aee92ee5b38452ba54f5448 588 SMART SM00244 24 193 2.1E-11 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS15970 e95d1c9c2aee92ee5b38452ba54f5448 588 PANTHER PTHR13806 1 352 1.1E-162 T 14-09-2016 IPR027705 Flotillin family AMK01_RS15970 e95d1c9c2aee92ee5b38452ba54f5448 588 PANTHER PTHR13806 368 531 1.1E-162 T 14-09-2016 IPR027705 Flotillin family AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 10 476 1.0E-139 T 14-09-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 10 478 29.982 T 14-09-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PANTHER PTHR11451 400 446 5.6E-105 T 14-09-2016 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PANTHER PTHR11451 10 331 5.6E-105 T 14-09-2016 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 55 6.2E-24 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 38 6.2E-24 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 223 6.2E-24 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 13 25 6.2E-24 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 209 6.2E-24 T 14-09-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 Gene3D G3DSA:3.90.800.10 75 200 1.1E-40 T 14-09-2016 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 Gene3D G3DSA:1.10.1160.10 252 334 1.1E-26 T 14-09-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 SUPERFAMILY SSF48163 320 477 7.46E-32 T 14-09-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 Gene3D G3DSA:3.40.50.620 201 250 2.2E-47 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 Gene3D G3DSA:3.40.50.620 10 74 2.2E-47 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 10 326 9.3E-119 T 14-09-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PANTHER PTHR11451:SF41 400 446 5.6E-105 T 14-09-2016 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 PANTHER PTHR11451:SF41 10 331 5.6E-105 T 14-09-2016 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 27 - T 14-09-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 Gene3D G3DSA:1.10.10.350 394 477 1.0E-15 T 14-09-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK01_RS18880 f154dbd1cbbdd69f45fd4378b9c6f869 488 SUPERFAMILY SSF52374 10 319 1.42E-105 T 14-09-2016 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 Gene3D G3DSA:2.60.40.1180 564 634 4.9E-9 T 14-09-2016 IPR013780 Glycosyl hydrolase, all-beta AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 SUPERFAMILY SSF51011 563 656 3.45E-9 T 14-09-2016 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 SMART SM00642 145 548 1.3E-5 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 PANTHER PTHR10357:SF74 9 559 2.2E-192 T 14-09-2016 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 PANTHER PTHR10357:SF74 581 636 2.2E-192 T 14-09-2016 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 Gene3D G3DSA:2.60.40.10 8 146 1.0E-31 T 14-09-2016 IPR013783 Immunoglobulin-like fold AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 SUPERFAMILY SSF51445 140 453 8.22E-104 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 SUPERFAMILY SSF51445 482 554 8.22E-104 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 95 4.1E-13 T 14-09-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 Gene3D G3DSA:3.20.20.80 147 554 2.4E-92 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 SUPERFAMILY SSF81296 8 127 9.8E-34 T 14-09-2016 IPR014756 Immunoglobulin E-set AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 655 9.8E-241 T 14-09-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 PANTHER PTHR10357 581 636 2.2E-192 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 PANTHER PTHR10357 9 559 2.2E-192 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS18560 f6ce297fe7ef6b27e981c6c2a5f4a818 658 Pfam PF00128 Alpha amylase, catalytic domain 177 260 8.4E-8 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 PIRSF PIRSF006076 3 779 8.5E-245 T 14-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 PANTHER PTHR12815 14 779 1.1E-171 T 14-09-2016 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 Pfam PF01103 Surface antigen 461 779 2.9E-79 T 14-09-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 40 779 4.8E-242 T 14-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 PANTHER PTHR12815:SF11 14 779 1.1E-171 T 14-09-2016 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 Pfam PF07244 Surface antigen variable number repeat 109 184 1.9E-12 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 Pfam PF07244 Surface antigen variable number repeat 188 275 2.8E-16 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 Pfam PF07244 Surface antigen variable number repeat 361 431 1.0E-14 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 Pfam PF07244 Surface antigen variable number repeat 40 105 2.6E-7 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 Pfam PF07244 Surface antigen variable number repeat 293 357 8.7E-8 T 14-09-2016 IPR010827 Surface antigen variable number GO:0019867 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 Gene3D G3DSA:2.40.160.50 402 776 7.7E-22 T 14-09-2016 AMK01_RS09730 d3efb370fe7de9d0fa9904c2e1469cd4 779 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 11 779 23.167 T 14-09-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 SUPERFAMILY SSF55073 96 247 3.3E-41 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 SMART SM00052 259 501 3.4E-98 T 14-09-2016 IPR001633 EAL domain AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 SMART SM00267 80 249 2.4E-47 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 Gene3D G3DSA:3.30.70.270 93 257 1.4E-49 T 14-09-2016 AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 PANTHER PTHR33121:SF13 238 504 1.1E-73 T 14-09-2016 AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 Gene3D G3DSA:3.20.20.450 263 503 4.8E-85 T 14-09-2016 IPR001633 EAL domain AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 88 247 4.5E-37 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 SUPERFAMILY SSF141868 264 504 7.59E-81 T 14-09-2016 IPR001633 EAL domain AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 PANTHER PTHR33121 238 504 1.1E-73 T 14-09-2016 AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 91 244 5.7E-40 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS02490 f7fbe47cfcff5319848f2f300254b05a 515 Pfam PF00563 EAL domain 266 496 2.0E-67 T 14-09-2016 IPR001633 EAL domain AMK01_RS12955 1cb289208bdc62cf5fa7d930eb70f6b6 441 Pfam PF13416 Bacterial extracellular solute-binding protein 46 376 5.0E-24 T 14-09-2016 AMK01_RS12955 1cb289208bdc62cf5fa7d930eb70f6b6 441 Gene3D G3DSA:3.40.190.10 148 370 3.1E-43 T 14-09-2016 AMK01_RS12955 1cb289208bdc62cf5fa7d930eb70f6b6 441 PANTHER PTHR30061 1 441 2.1E-116 T 14-09-2016 AMK01_RS12955 1cb289208bdc62cf5fa7d930eb70f6b6 441 PANTHER PTHR30061:SF3 1 441 2.1E-116 T 14-09-2016 AMK01_RS12955 1cb289208bdc62cf5fa7d930eb70f6b6 441 SUPERFAMILY SSF53850 27 438 2.12E-68 T 14-09-2016 AMK01_RS08730 f547a7bd25b867e2ebedea0de0fbd758 263 PANTHER PTHR22748 1 258 6.3E-134 T 14-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMK01_RS08730 f547a7bd25b867e2ebedea0de0fbd758 263 PANTHER PTHR22748:SF9 1 258 6.3E-134 T 14-09-2016 AMK01_RS08730 f547a7bd25b867e2ebedea0de0fbd758 263 SUPERFAMILY SSF56219 1 257 3.4E-78 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS08730 f547a7bd25b867e2ebedea0de0fbd758 263 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 255 8.2E-75 T 14-09-2016 AMK01_RS08730 f547a7bd25b867e2ebedea0de0fbd758 263 Gene3D G3DSA:3.60.10.10 1 256 2.7E-80 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS08730 f547a7bd25b867e2ebedea0de0fbd758 263 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 1.2E-20 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS08730 f547a7bd25b867e2ebedea0de0fbd758 263 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 256 2.6E-70 T 14-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 PANTHER PTHR26402 436 447 1.1E-40 T 14-09-2016 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 PANTHER PTHR26402 3 134 1.1E-40 T 14-09-2016 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 SMART SM00448 3 116 2.3E-43 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 SMART SM00448 156 268 1.7E-10 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 SUPERFAMILY SSF52172 2 134 1.39E-41 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 292 451 1.5E-50 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 Pfam PF00072 Response regulator receiver domain 158 267 6.1E-14 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 Pfam PF00072 Response regulator receiver domain 5 116 6.7E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 SUPERFAMILY SSF52172 157 289 4.55E-25 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 Gene3D G3DSA:3.40.50.2300 3 128 1.3E-43 T 14-09-2016 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 Gene3D G3DSA:3.40.50.2300 156 281 2.6E-22 T 14-09-2016 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 SMART SM00267 281 455 4.7E-68 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 455 9.2E-57 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 Gene3D G3DSA:3.30.70.270 294 454 3.5E-59 T 14-09-2016 AMK01_RS08245 09fd3471c29bc9bc83ef4fef28257736 457 SUPERFAMILY SSF55073 297 453 1.41E-52 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS01155 1bbe7eb4a4bfab95cc1fb8dec286ce72 211 Pfam PF07811 TadE-like protein 31 73 1.5E-6 T 14-09-2016 IPR012495 TadE-like AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 14-09-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 SUPERFAMILY SSF51430 5 270 7.33E-91 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 Pfam PF00248 Aldo/keto reductase family 18 260 1.1E-45 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 PANTHER PTHR11732 3 274 4.9E-133 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 14-09-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 PRINTS PR00069 Aldo-keto reductase signature 37 61 3.5E-43 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 PRINTS PR00069 Aldo-keto reductase signature 125 142 3.5E-43 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 PRINTS PR00069 Aldo-keto reductase signature 159 188 3.5E-43 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 PRINTS PR00069 Aldo-keto reductase signature 93 111 3.5E-43 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 PRINTS PR00069 Aldo-keto reductase signature 196 220 3.5E-43 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 14-09-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMK01_RS20370 5f6d61f61f8bb4e38e900dcfdeed788b 276 Gene3D G3DSA:3.20.20.100 4 268 9.6E-100 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 PRINTS PR00189 Transthyretin signature 3 23 1.2E-6 T 14-09-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 PRINTS PR00189 Transthyretin signature 96 118 1.2E-6 T 14-09-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 PANTHER PTHR10395 1 118 4.0E-41 T 14-09-2016 AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 14-09-2016 IPR023418 Transthyretin, thyroxine binding site AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 PANTHER PTHR10395:SF7 1 118 4.0E-41 T 14-09-2016 AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 ProSitePatterns PS00769 Transthyretin signature 2. 101 113 - T 14-09-2016 IPR023419 Transthyretin, conserved site AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 SUPERFAMILY SSF49472 1 118 7.98E-40 T 14-09-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 118 2.9E-37 T 14-09-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 Gene3D G3DSA:2.60.40.180 4 118 1.3E-35 T 14-09-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily AMK01_RS15980 91425d75fa763fc0c214212fb1cca373 118 Pfam PF00576 HIUase/Transthyretin family 4 117 1.6E-32 T 14-09-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily AMK01_RS03125 a83b2cca13e76b172f310db0152d487e 393 PANTHER PTHR30341 10 392 2.1E-151 T 14-09-2016 AMK01_RS03125 a83b2cca13e76b172f310db0152d487e 393 PANTHER PTHR30341:SF0 10 392 2.1E-151 T 14-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMK01_RS03125 a83b2cca13e76b172f310db0152d487e 393 Gene3D G3DSA:1.20.1530.10 13 391 5.2E-146 T 14-09-2016 IPR023171 Na/H antiporter domain AMK01_RS03125 a83b2cca13e76b172f310db0152d487e 393 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 14 392 22.788 T 14-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMK01_RS03125 a83b2cca13e76b172f310db0152d487e 393 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 17 386 6.4E-129 T 14-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMK01_RS03125 a83b2cca13e76b172f310db0152d487e 393 Pfam PF06965 Na+/H+ antiporter 1 16 386 1.2E-140 T 14-09-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMK01_RS02585 dea43e8e01cb218e3c914958564e68d4 130 Gene3D G3DSA:2.30.30.240 24 81 2.3E-13 T 14-09-2016 AMK01_RS02585 dea43e8e01cb218e3c914958564e68d4 130 PANTHER PTHR36505:SF1 14 130 4.1E-46 T 14-09-2016 AMK01_RS02585 dea43e8e01cb218e3c914958564e68d4 130 SUPERFAMILY SSF50346 15 129 3.73E-30 T 14-09-2016 IPR011033 PRC-barrel-like AMK01_RS02585 dea43e8e01cb218e3c914958564e68d4 130 PANTHER PTHR36505 14 130 4.1E-46 T 14-09-2016 AMK01_RS02585 dea43e8e01cb218e3c914958564e68d4 130 Pfam PF05239 PRC-barrel domain 24 97 1.4E-14 T 14-09-2016 IPR027275 PRC-barrel domain AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-09-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.3E-56 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 4.2E-38 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 4.2E-38 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 4.2E-38 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 4.2E-38 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.4E-48 T 14-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-09-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 Gene3D G3DSA:3.90.1170.10 23 134 3.2E-51 T 14-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.375 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 SUPERFAMILY SSF54686 1 134 3.53E-55 T 14-09-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08485 f4eaa71e9edf3a679415ac9c15d1cc28 137 PANTHER PTHR12220 1 134 1.8E-71 T 14-09-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK01_RS19595 ad9deea5da3898a1dae7073203fb8bf4 246 Gene3D G3DSA:3.40.50.150 87 215 6.9E-21 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS19595 ad9deea5da3898a1dae7073203fb8bf4 246 Pfam PF08241 Methyltransferase domain 87 130 1.4E-9 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK01_RS19595 ad9deea5da3898a1dae7073203fb8bf4 246 PANTHER PTHR10108:SF820 87 224 5.7E-20 T 14-09-2016 AMK01_RS19595 ad9deea5da3898a1dae7073203fb8bf4 246 SUPERFAMILY SSF53335 87 214 4.58E-23 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS19595 ad9deea5da3898a1dae7073203fb8bf4 246 PANTHER PTHR10108 87 224 5.7E-20 T 14-09-2016 AMK01_RS19235 59000a2ca24db74e10213a9233ad00a1 130 PIRSF PIRSF009151 1 128 5.3E-63 T 14-09-2016 IPR008497 Protein of unknown function DUF779 AMK01_RS19235 59000a2ca24db74e10213a9233ad00a1 130 Pfam PF05610 Protein of unknown function (DUF779) 20 113 1.2E-44 T 14-09-2016 IPR008497 Protein of unknown function DUF779 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 PRINTS PR01166 Cytochrome c oxidase subunit II signature 120 139 3.9E-38 T 14-09-2016 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 PRINTS PR01166 Cytochrome c oxidase subunit II signature 218 235 3.9E-38 T 14-09-2016 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 PRINTS PR01166 Cytochrome c oxidase subunit II signature 236 253 3.9E-38 T 14-09-2016 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 3.9E-38 T 14-09-2016 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 3.9E-38 T 14-09-2016 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 PRINTS PR01166 Cytochrome c oxidase subunit II signature 198 218 3.9E-38 T 14-09-2016 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 Gene3D G3DSA:1.10.287.90 25 114 4.0E-27 T 14-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 124 254 3.2E-44 T 14-09-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 SUPERFAMILY SSF81464 17 113 1.8E-27 T 14-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 199 247 - T 14-09-2016 IPR001505 Copper centre Cu(A) GO:0005507 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 25 111 1.2E-23 T 14-09-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 36 263 9.0E-56 T 14-09-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 SUPERFAMILY SSF49503 121 266 1.83E-49 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 Gene3D G3DSA:2.60.40.420 117 267 1.6E-52 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS04845 0969f64878ae42f4d8de99b4416dff47 294 PANTHER PTHR22888 4 263 1.2E-95 T 14-09-2016 AMK01_RS17935 a407ee848bddbd7097e683e1130cc127 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 323 3.6E-134 T 14-09-2016 IPR019949 Luciferase family oxidoreductase, group 1 AMK01_RS17935 a407ee848bddbd7097e683e1130cc127 333 SUPERFAMILY SSF51679 3 323 1.3E-88 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS17935 a407ee848bddbd7097e683e1130cc127 333 Pfam PF00296 Luciferase-like monooxygenase 20 301 5.4E-36 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS17935 a407ee848bddbd7097e683e1130cc127 333 PANTHER PTHR30137:SF2 1 323 1.1E-134 T 14-09-2016 AMK01_RS17935 a407ee848bddbd7097e683e1130cc127 333 PANTHER PTHR30137 1 323 1.1E-134 T 14-09-2016 AMK01_RS17935 a407ee848bddbd7097e683e1130cc127 333 Gene3D G3DSA:3.20.20.30 3 323 2.1E-92 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 PANTHER PTHR30111 225 327 1.8E-56 T 14-09-2016 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 SUPERFAMILY SSF118352 276 327 2.88E-14 T 14-09-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 PIRSF PIRSF005261 10 329 7.5E-71 T 14-09-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 Pfam PF01430 Hsp33 protein 17 322 2.4E-76 T 14-09-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 Gene3D G3DSA:3.55.30.10 16 276 3.1E-77 T 14-09-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 PANTHER PTHR30111 8 206 1.8E-56 T 14-09-2016 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 PANTHER PTHR30111:SF1 225 327 1.8E-56 T 14-09-2016 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 Gene3D G3DSA:3.90.1280.10 278 327 6.1E-17 T 14-09-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 SUPERFAMILY SSF64397 16 284 8.37E-65 T 14-09-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMK01_RS02760 6a2a4deb0f005f2e997eb96ae4a16e47 330 PANTHER PTHR30111:SF1 8 206 1.8E-56 T 14-09-2016 AMK01_RS06905 f3e0595213d5bc9dc93758abb460e8bf 367 PANTHER PTHR12526 63 364 6.0E-22 T 14-09-2016 AMK01_RS06905 f3e0595213d5bc9dc93758abb460e8bf 367 SUPERFAMILY SSF53756 11 362 3.34E-52 T 14-09-2016 AMK01_RS06905 f3e0595213d5bc9dc93758abb460e8bf 367 Pfam PF00534 Glycosyl transferases group 1 185 338 1.1E-16 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS06905 f3e0595213d5bc9dc93758abb460e8bf 367 Pfam PF13579 Glycosyl transferase 4-like domain 12 162 1.4E-10 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK01_RS06905 f3e0595213d5bc9dc93758abb460e8bf 367 Gene3D G3DSA:3.40.50.2000 184 337 2.5E-12 T 14-09-2016 AMK01_RS17020 87e380e6c3f691c2b43aac6de9703925 273 Pfam PF01774 UreD urease accessory protein 54 251 5.3E-43 T 14-09-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AMK01_RS17020 87e380e6c3f691c2b43aac6de9703925 273 PANTHER PTHR33643:SF1 12 221 7.7E-32 T 14-09-2016 AMK01_RS17020 87e380e6c3f691c2b43aac6de9703925 273 PANTHER PTHR33643 12 221 7.7E-32 T 14-09-2016 AMK01_RS17020 87e380e6c3f691c2b43aac6de9703925 273 Hamap MF_01384 Urease accessory protein UreD [ureD]. 15 262 25.545 T 14-09-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AMK01_RS01400 ac1a2bf209fa6c427f5d2a452863380a 150 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 117 2.4E-21 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS01400 ac1a2bf209fa6c427f5d2a452863380a 150 Gene3D G3DSA:3.90.1590.10 5 135 5.5E-34 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS01400 ac1a2bf209fa6c427f5d2a452863380a 150 SUPERFAMILY SSF51316 6 123 2.41E-38 T 14-09-2016 IPR011057 Mss4-like AMK01_RS01400 ac1a2bf209fa6c427f5d2a452863380a 150 PANTHER PTHR33337 7 123 1.5E-21 T 14-09-2016 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 702 9.5E-160 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 PANTHER PTHR30075:SF2 1 342 7.7E-246 T 14-09-2016 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 PANTHER PTHR30075:SF2 363 703 7.7E-246 T 14-09-2016 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 PANTHER PTHR30075 1 342 7.7E-246 T 14-09-2016 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 PANTHER PTHR30075 363 703 7.7E-246 T 14-09-2016 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 SUPERFAMILY SSF109604 376 517 1.13E-16 T 14-09-2016 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 Pfam PF05746 DALR anticodon binding domain 595 691 2.0E-5 T 14-09-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 2.2E-20 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 2.2E-20 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 420 439 2.2E-20 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 2.2E-20 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 561 2.9E-192 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04535 7fb04fc0bafaa78302d37314d1800e42 704 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 702 24.059 T 14-09-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 Gene3D G3DSA:1.10.1740.10 11 111 1.1E-18 T 14-09-2016 AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 PANTHER PTHR30173:SF31 2 185 3.5E-40 T 14-09-2016 AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 Gene3D G3DSA:1.10.10.10 122 184 7.2E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 SUPERFAMILY SSF88946 2 108 1.1E-20 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 SUPERFAMILY SSF88659 124 182 9.53E-15 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 Pfam PF08281 Sigma-70, region 4 126 177 1.0E-13 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 PANTHER PTHR30173 2 185 3.5E-40 T 14-09-2016 AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 Pfam PF04542 Sigma-70 region 2 28 95 3.7E-14 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20205 955b05f09385c67224732cf4ce8f670c 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 181 1.6E-23 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 PANTHER PTHR24322 12 188 6.9E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 SUPERFAMILY SSF51735 1 235 5.0E-63 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 Gene3D G3DSA:3.40.50.720 2 222 6.3E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.4E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.4E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.4E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.4E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.4E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 Pfam PF00106 short chain dehydrogenase 9 200 3.2E-49 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.2E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07305 350f97f55c8d7c4feae736ee12401f43 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.2E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS18380 56c9d56ac898398bd923de0ee3729fa7 402 SUPERFAMILY SSF52266 84 302 1.32E-18 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS18380 56c9d56ac898398bd923de0ee3729fa7 402 Pfam PF04311 Protein of unknown function (DUF459) 84 348 1.3E-107 T 14-09-2016 IPR007407 Protein of unknown function DUF459 AMK01_RS18380 56c9d56ac898398bd923de0ee3729fa7 402 Gene3D G3DSA:3.40.50.1110 106 300 4.9E-14 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS11150 1e0cf1f1ef1db6075c0d4fcb9f877b52 165 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 8 156 3.3E-63 T 14-09-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 AMK01_RS11150 1e0cf1f1ef1db6075c0d4fcb9f877b52 165 PANTHER PTHR22960 6 162 1.5E-96 T 14-09-2016 AMK01_RS11150 1e0cf1f1ef1db6075c0d4fcb9f877b52 165 Gene3D G3DSA:3.30.70.640 8 161 2.6E-68 T 14-09-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK01_RS11150 1e0cf1f1ef1db6075c0d4fcb9f877b52 165 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 6 162 38.064 T 14-09-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 AMK01_RS11150 1e0cf1f1ef1db6075c0d4fcb9f877b52 165 SUPERFAMILY SSF55040 15 159 2.75E-61 T 14-09-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK01_RS11150 1e0cf1f1ef1db6075c0d4fcb9f877b52 165 Pfam PF01967 MoaC family 19 154 2.1E-55 T 14-09-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK01_RS00945 0ae116ddd2d7da2aba60488ec8aa3162 319 PANTHER PTHR30043:SF1 2 74 8.8E-71 T 14-09-2016 AMK01_RS00945 0ae116ddd2d7da2aba60488ec8aa3162 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 309 4.5E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00945 0ae116ddd2d7da2aba60488ec8aa3162 319 SUPERFAMILY SSF161098 114 299 3.14E-33 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00945 0ae116ddd2d7da2aba60488ec8aa3162 319 Gene3D G3DSA:1.10.3720.10 110 309 1.0E-26 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00945 0ae116ddd2d7da2aba60488ec8aa3162 319 PANTHER PTHR30043:SF1 106 316 8.8E-71 T 14-09-2016 AMK01_RS00945 0ae116ddd2d7da2aba60488ec8aa3162 319 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 27 309 2.4E-73 T 14-09-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AMK01_RS00945 0ae116ddd2d7da2aba60488ec8aa3162 319 PANTHER PTHR30043 106 316 8.8E-71 T 14-09-2016 AMK01_RS00945 0ae116ddd2d7da2aba60488ec8aa3162 319 PANTHER PTHR30043 2 74 8.8E-71 T 14-09-2016 AMK01_RS02810 947f255ae626e4c93985d83a42645c3b 126 Gene3D G3DSA:3.10.180.10 1 124 4.0E-16 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS02810 947f255ae626e4c93985d83a42645c3b 126 PANTHER PTHR36113:SF3 2 121 1.7E-18 T 14-09-2016 AMK01_RS02810 947f255ae626e4c93985d83a42645c3b 126 PANTHER PTHR36113 2 121 1.7E-18 T 14-09-2016 AMK01_RS02810 947f255ae626e4c93985d83a42645c3b 126 SUPERFAMILY SSF54593 1 126 1.48E-20 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS02810 947f255ae626e4c93985d83a42645c3b 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 121 1.1E-7 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 PANTHER PTHR41251 3 257 9.9E-39 T 14-09-2016 AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 SUPERFAMILY SSF100939 4 258 5.49E-49 T 14-09-2016 IPR016194 SPOC-like, C-terminal domain AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 PIRSF PIRSF006493 1 277 1.0E-100 T 14-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 Gene3D G3DSA:2.40.290.10 5 147 1.5E-10 T 14-09-2016 IPR016194 SPOC-like, C-terminal domain AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 TIGRFAM TIGR02772 Ku_bact: Ku protein 3 256 4.9E-84 T 14-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 256 29.777 T 14-09-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 Pfam PF02735 Ku70/Ku80 beta-barrel domain 14 178 2.9E-28 T 14-09-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 PANTHER PTHR41251:SF1 3 257 9.9E-39 T 14-09-2016 AMK01_RS03280 054eec610f84b2415cecd17a230ad455 277 SMART SM00559 55 183 2.1E-8 T 14-09-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 Pfam PF00849 RNA pseudouridylate synthase 113 195 1.8E-8 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 SUPERFAMILY SSF55174 50 117 3.53E-11 T 14-09-2016 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 PANTHER PTHR21600 307 384 4.1E-69 T 14-09-2016 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 PANTHER PTHR21600:SF2 307 384 4.1E-69 T 14-09-2016 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 PANTHER PTHR21600:SF2 48 274 4.1E-69 T 14-09-2016 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 Pfam PF01479 S4 domain 52 98 3.2E-8 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 117 271 5.2E-35 T 14-09-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 PANTHER PTHR21600 48 274 4.1E-69 T 14-09-2016 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 Gene3D G3DSA:3.10.290.10 51 114 1.2E-17 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 SUPERFAMILY SSF55120 110 275 4.32E-36 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 150 164 - T 14-09-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK01_RS04265 2111a585c6e7a14a6d3f45ea3a9fe3cd 656 SMART SM00363 52 109 3.3E-8 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS09640 62daa902d8ae99329f1f37193cd7745a 117 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 34 112 8.9E-34 T 14-09-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 AMK01_RS09640 62daa902d8ae99329f1f37193cd7745a 117 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 23 112 28.255 T 14-09-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMK01_RS09640 62daa902d8ae99329f1f37193cd7745a 117 SUPERFAMILY SSF54736 32 116 4.76E-32 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK01_RS09640 62daa902d8ae99329f1f37193cd7745a 117 PANTHER PTHR33473 7 116 9.5E-39 T 14-09-2016 AMK01_RS09640 62daa902d8ae99329f1f37193cd7745a 117 Gene3D G3DSA:3.30.1390.10 18 116 3.9E-45 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK01_RS13980 fd4453a49eb61bcadc1276af16adeadc 564 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 263 6.1E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13980 fd4453a49eb61bcadc1276af16adeadc 564 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 370 557 1.7E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13980 fd4453a49eb61bcadc1276af16adeadc 564 Gene3D G3DSA:1.10.3720.10 294 548 4.7E-38 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13980 fd4453a49eb61bcadc1276af16adeadc 564 Gene3D G3DSA:1.10.3720.10 50 274 1.4E-40 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13980 fd4453a49eb61bcadc1276af16adeadc 564 PANTHER PTHR30183 1 558 5.6E-47 T 14-09-2016 AMK01_RS13980 fd4453a49eb61bcadc1276af16adeadc 564 SUPERFAMILY SSF161098 294 553 5.33E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13980 fd4453a49eb61bcadc1276af16adeadc 564 SUPERFAMILY SSF161098 12 275 7.63E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS18625 cc711964c84599e95c0b001c2538adb1 550 SMART SM00911 357 438 1.2E-25 T 14-09-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMK01_RS18625 cc711964c84599e95c0b001c2538adb1 550 PANTHER PTHR41523 26 550 2.0E-32 T 14-09-2016 AMK01_RS18625 cc711964c84599e95c0b001c2538adb1 550 Pfam PF07536 HWE histidine kinase 357 437 1.2E-18 T 14-09-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 Gene3D G3DSA:1.10.150.20 206 275 1.0E-21 T 14-09-2016 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 Gene3D G3DSA:3.30.1490.100 281 385 1.9E-32 T 14-09-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 Gene3D G3DSA:3.30.70.270 105 203 2.2E-24 T 14-09-2016 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 SUPERFAMILY SSF100879 280 377 2.35E-27 T 14-09-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 PANTHER PTHR11076 46 379 2.0E-111 T 14-09-2016 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 Hamap MF_01113 DNA polymerase IV [dinB]. 42 392 34.465 T 14-09-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 Pfam PF11799 impB/mucB/samB family C-terminal domain 279 381 3.0E-16 T 14-09-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 Pfam PF00817 impB/mucB/samB family 48 194 9.5E-44 T 14-09-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS08220 a4122806e253d9c8c2b83db0eef82941 430 SUPERFAMILY SSF56672 35 274 1.42E-79 T 14-09-2016 AMK01_RS18415 71a5cca6b805a81adad23ac6283b7b8a 156 Pfam PF00011 Hsp20/alpha crystallin family 44 138 1.7E-18 T 14-09-2016 IPR002068 Alpha crystallin/Hsp20 domain AMK01_RS18415 71a5cca6b805a81adad23ac6283b7b8a 156 SUPERFAMILY SSF49764 5 138 9.77E-22 T 14-09-2016 IPR008978 HSP20-like chaperone AMK01_RS18415 71a5cca6b805a81adad23ac6283b7b8a 156 PANTHER PTHR11527 5 146 9.3E-52 T 14-09-2016 IPR031107 Small heat shock protein HSP20 AMK01_RS18415 71a5cca6b805a81adad23ac6283b7b8a 156 PANTHER PTHR11527:SF145 5 146 9.3E-52 T 14-09-2016 AMK01_RS18415 71a5cca6b805a81adad23ac6283b7b8a 156 Gene3D G3DSA:2.60.40.790 4 139 7.5E-20 T 14-09-2016 IPR008978 HSP20-like chaperone AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 Gene3D G3DSA:1.20.1250.20 219 393 9.7E-15 T 14-09-2016 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 Gene3D G3DSA:1.20.1250.20 9 197 1.7E-45 T 14-09-2016 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 14-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PANTHER PTHR23504:SF18 8 408 1.5E-136 T 14-09-2016 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PANTHER PTHR23504 8 408 1.5E-136 T 14-09-2016 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 SUPERFAMILY SSF103473 4 400 1.44E-66 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 109 130 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 343 366 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 167 187 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 308 328 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 82 106 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 255 275 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 139 161 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 283 304 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 PRINTS PR01035 Tetracycline resistance protein signature 20 36 5.7E-62 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS15150 bd6d237a051f95080c2d0bfadffabc86 414 Pfam PF07690 Major Facilitator Superfamily 14 359 1.6E-47 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS28800 90eef95cc243e086b51db3487f0cb507 60 PANTHER PTHR10314:SF110 7 60 1.4E-25 T 14-09-2016 AMK01_RS28800 90eef95cc243e086b51db3487f0cb507 60 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 2 60 2.2E-7 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS28800 90eef95cc243e086b51db3487f0cb507 60 Gene3D G3DSA:3.40.50.1100 34 60 5.4E-11 T 14-09-2016 AMK01_RS28800 90eef95cc243e086b51db3487f0cb507 60 SUPERFAMILY SSF53686 2 60 2.88E-15 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS28800 90eef95cc243e086b51db3487f0cb507 60 Gene3D G3DSA:3.40.50.1100 2 33 2.1E-7 T 14-09-2016 AMK01_RS28800 90eef95cc243e086b51db3487f0cb507 60 PANTHER PTHR10314 7 60 1.4E-25 T 14-09-2016 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 Gene3D G3DSA:3.40.50.1980 176 296 2.8E-42 T 14-09-2016 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 Gene3D G3DSA:3.40.50.1980 20 175 5.8E-52 T 14-09-2016 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00691 Adhesin B signature 53 71 5.7E-23 T 14-09-2016 IPR006129 Adhesin B GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00691 Adhesin B signature 72 91 5.7E-23 T 14-09-2016 IPR006129 Adhesin B GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00691 Adhesin B signature 232 249 5.7E-23 T 14-09-2016 IPR006129 Adhesin B GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00691 Adhesin B signature 183 200 5.7E-23 T 14-09-2016 IPR006129 Adhesin B GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00691 Adhesin B signature 28 49 5.7E-23 T 14-09-2016 IPR006129 Adhesin B GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00691 Adhesin B signature 254 272 5.7E-23 T 14-09-2016 IPR006129 Adhesin B GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00691 Adhesin B signature 275 293 5.7E-23 T 14-09-2016 IPR006129 Adhesin B GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 SUPERFAMILY SSF53807 24 296 3.78E-85 T 14-09-2016 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00690 Adhesin family signature 183 204 3.3E-26 T 14-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00690 Adhesin family signature 262 281 3.3E-26 T 14-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00690 Adhesin family signature 59 72 3.3E-26 T 14-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00690 Adhesin family signature 236 254 3.3E-26 T 14-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00690 Adhesin family signature 72 89 3.3E-26 T 14-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PRINTS PR00690 Adhesin family signature 28 46 3.3E-26 T 14-09-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 295 4.8E-81 T 14-09-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PANTHER PTHR30477:SF16 1 296 4.0E-79 T 14-09-2016 AMK01_RS04950 9238a3e5661cd68f41bf5187c635de6b 300 PANTHER PTHR30477 1 296 4.0E-79 T 14-09-2016 AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 Gene3D G3DSA:3.40.50.300 6 259 4.9E-80 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 SUPERFAMILY SSF52540 6 257 1.25E-72 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 304 1.5E-18 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 Pfam PF00005 ABC transporter 33 185 2.4E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 PANTHER PTHR24220 8 326 2.0E-149 T 14-09-2016 AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 323 2.5E-25 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 SMART SM00382 42 235 1.2E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS15785 a3199158f2b7f91df718016055f7af65 328 PANTHER PTHR24220:SF336 8 326 2.0E-149 T 14-09-2016 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 656 2.6E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 677 2.6E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 642 2.6E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 696 2.6E-15 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 SUPERFAMILY SSF55785 354 467 7.75E-7 T 14-09-2016 IPR000014 PAS domain AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 PANTHER PTHR24423 361 696 8.9E-71 T 14-09-2016 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 Gene3D G3DSA:3.30.450.20 358 467 7.9E-8 T 14-09-2016 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 PANTHER PTHR24423:SF544 361 696 8.9E-71 T 14-09-2016 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 SUPERFAMILY SSF47384 480 544 8.24E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 Gene3D G3DSA:3.30.565.10 551 696 9.7E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 SMART SM00387 591 699 3.7E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 SUPERFAMILY SSF55874 548 696 1.83E-35 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS10920 9c4421ec09be1752d683b25f8abd5ce3 700 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 594 697 5.1E-17 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS12575 fcdd5111fd5453f88e38869947b3c35b 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 307 2.0E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12575 fcdd5111fd5453f88e38869947b3c35b 314 PANTHER PTHR32243 29 314 4.8E-106 T 14-09-2016 AMK01_RS12575 fcdd5111fd5453f88e38869947b3c35b 314 PANTHER PTHR32243:SF23 29 314 4.8E-106 T 14-09-2016 AMK01_RS12575 fcdd5111fd5453f88e38869947b3c35b 314 SUPERFAMILY SSF161098 37 314 1.59E-62 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12575 fcdd5111fd5453f88e38869947b3c35b 314 Gene3D G3DSA:1.10.3720.10 36 299 1.7E-55 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 PANTHER PTHR30075 1 304 1.1E-221 T 14-09-2016 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 Gene3D G3DSA:3.30.930.10 7 219 1.1E-100 T 14-09-2016 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 Gene3D G3DSA:1.20.58.180 221 305 3.1E-32 T 14-09-2016 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 13 304 9.8E-137 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 87 107 2.5E-54 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 118 142 2.5E-54 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 144 164 2.5E-54 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 167 182 2.5E-54 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 66 81 2.5E-54 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 12 309 58.053 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 14 304 6.8E-143 T 14-09-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK01_RS04490 d7a21b5347b50c5f27729d646c2e66ac 318 SUPERFAMILY SSF55681 13 305 4.47E-126 T 14-09-2016 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 SUPERFAMILY SSF51445 106 535 2.77E-92 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 33 543 2.0E-165 T 14-09-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 Pfam PF11941 Domain of unknown function (DUF3459) 520 614 6.3E-14 T 14-09-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 Pfam PF00128 Alpha amylase, catalytic domain 147 223 2.1E-7 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 Gene3D G3DSA:3.20.20.80 505 534 6.1E-72 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 Gene3D G3DSA:3.20.20.80 127 455 6.1E-72 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 SUPERFAMILY SSF81296 23 110 2.6E-18 T 14-09-2016 IPR014756 Immunoglobulin E-set AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 PANTHER PTHR10357 513 612 3.9E-89 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 PANTHER PTHR10357 399 488 3.9E-89 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 PANTHER PTHR10357:SF110 513 612 3.9E-89 T 14-09-2016 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 PANTHER PTHR10357:SF110 24 357 3.9E-89 T 14-09-2016 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 PANTHER PTHR10357:SF110 399 488 3.9E-89 T 14-09-2016 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 PANTHER PTHR10357 24 357 3.9E-89 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 Gene3D G3DSA:2.60.40.10 24 109 9.2E-23 T 14-09-2016 IPR013783 Immunoglobulin-like fold AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 SMART SM00642 131 477 2.4E-8 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS16885 85a22981692fb08281bbad900d1e1353 662 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 22 91 1.9E-8 T 14-09-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 5 281 35.966 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 SUPERFAMILY SSF52096 25 283 3.4E-76 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 PANTHER PTHR22855 1 292 4.5E-129 T 14-09-2016 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 PANTHER PTHR22855:SF17 1 292 4.5E-129 T 14-09-2016 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 Gene3D G3DSA:3.90.226.10 19 286 2.4E-63 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 15 283 9.8E-104 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 Pfam PF01039 Carboxyl transferase domain 106 242 1.4E-16 T 14-09-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.1E-37 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.1E-37 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.1E-37 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.1E-37 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS00120 28147add9b8afabaae31b06378454d5a 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.1E-37 T 14-09-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS18120 2527c48fbe830480878432d0020e2c76 112 SUPERFAMILY SSF54909 1 110 1.15E-27 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS18120 2527c48fbe830480878432d0020e2c76 112 PANTHER PTHR35174 2 108 1.9E-25 T 14-09-2016 AMK01_RS18120 2527c48fbe830480878432d0020e2c76 112 Pfam PF03795 YCII-related domain 1 108 1.0E-16 T 14-09-2016 IPR005545 YCII-related AMK01_RS18120 2527c48fbe830480878432d0020e2c76 112 Gene3D G3DSA:3.30.70.1060 1 110 4.1E-31 T 14-09-2016 AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 5.8E-19 T 14-09-2016 IPR020070 Ribosomal protein L9, N-terminal AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 Gene3D G3DSA:3.40.5.10 1 52 1.0E-21 T 14-09-2016 IPR020070 Ribosomal protein L9, N-terminal AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 PANTHER PTHR21368 1 163 9.1E-43 T 14-09-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 SUPERFAMILY SSF55653 57 146 3.92E-24 T 14-09-2016 IPR020069 Ribosomal protein L9, C-terminal AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-09-2016 IPR020070 Ribosomal protein L9, N-terminal AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.37 T 14-09-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 1.8E-21 T 14-09-2016 IPR020069 Ribosomal protein L9, C-terminal AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 Gene3D G3DSA:3.10.430.100 61 146 2.3E-24 T 14-09-2016 IPR020069 Ribosomal protein L9, C-terminal AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 SUPERFAMILY SSF55658 1 57 7.85E-16 T 14-09-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMK01_RS07355 58d4044697532debbb3d428f12b0eea8 192 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 8.9E-35 T 14-09-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 Gene3D G3DSA:1.10.10.10 4 95 8.8E-33 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 SUPERFAMILY SSF46785 9 94 7.39E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 9.6E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 9.6E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 9.6E-9 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 Pfam PF01022 Bacterial regulatory protein, arsR family 22 67 1.4E-13 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 SMART SM00418 15 93 4.6E-28 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 PANTHER PTHR33154:SF10 13 105 7.4E-28 T 14-09-2016 AMK01_RS15730 cd46b9fa186045a8d138eb872f6c5845 105 PANTHER PTHR33154 13 105 7.4E-28 T 14-09-2016 AMK01_RS12580 742a3c68e28b57b01370033a2d795eab 301 PANTHER PTHR30193 21 300 5.8E-85 T 14-09-2016 AMK01_RS12580 742a3c68e28b57b01370033a2d795eab 301 SUPERFAMILY SSF161098 60 286 4.84E-47 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12580 742a3c68e28b57b01370033a2d795eab 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 287 9.7E-14 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12580 742a3c68e28b57b01370033a2d795eab 301 PANTHER PTHR30193:SF29 21 300 5.8E-85 T 14-09-2016 AMK01_RS12580 742a3c68e28b57b01370033a2d795eab 301 Gene3D G3DSA:1.10.3720.10 16 286 1.1E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 Pfam PF00232 Glycosyl hydrolase family 1 9 447 2.6E-172 T 14-09-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 420 432 1.4E-20 T 14-09-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 413 1.4E-20 T 14-09-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 386 1.4E-20 T 14-09-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 355 363 1.4E-20 T 14-09-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 1.4E-20 T 14-09-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 PANTHER PTHR10353 9 448 3.3E-184 T 14-09-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 15 29 - T 14-09-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 PANTHER PTHR10353:SF36 9 448 3.3E-184 T 14-09-2016 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 TIGRFAM TIGR03356 BGL: beta-galactosidase 11 442 4.6E-183 T 14-09-2016 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7089|MetaCyc: PWY-7091|MetaCyc: PWY-7092 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 Gene3D G3DSA:3.20.20.80 5 446 1.7E-154 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 355 363 - T 14-09-2016 IPR018120 Glycoside hydrolase family 1, active site AMK01_RS18800 21758f14c137705c9b95d6400e984a93 464 SUPERFAMILY SSF51445 8 446 1.9E-158 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 Pfam PF03466 LysR substrate binding domain 88 291 1.2E-45 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 9.6E-18 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 SUPERFAMILY SSF46785 2 111 1.59E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 PANTHER PTHR30537:SF5 1 298 9.2E-105 T 14-09-2016 AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 SUPERFAMILY SSF53850 90 295 1.99E-45 T 14-09-2016 AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 Gene3D G3DSA:3.40.190.10 93 175 7.7E-23 T 14-09-2016 AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 PANTHER PTHR30537 1 298 9.2E-105 T 14-09-2016 AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 Gene3D G3DSA:3.40.190.10 176 255 3.1E-22 T 14-09-2016 AMK01_RS01895 357ea98add1dc2f97822ff775773943c 301 Gene3D G3DSA:1.10.10.10 2 87 3.4E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 249 4.4E-39 T 14-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 157 173 - T 14-09-2016 IPR018201 Beta-ketoacyl synthase, active site AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 SUPERFAMILY SSF53901 1 256 7.49E-62 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 Gene3D G3DSA:3.40.47.10 2 260 1.6E-56 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 SMART SM00825 Beta-ketoacyl synthase 4 410 1.5E-12 T 14-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 SUPERFAMILY SSF53901 218 407 4.22E-60 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 364 7.1E-29 T 14-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 Gene3D G3DSA:3.40.47.10 266 408 9.2E-47 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS00680 09ffeb82ba26be2cb672bae03d11721c 410 PANTHER PTHR11712 1 407 4.5E-149 T 14-09-2016 AMK01_RS21650 42f1f1379d9c856e1274570028928d2b 129 Gene3D G3DSA:3.30.70.1400 64 125 1.9E-21 T 14-09-2016 AMK01_RS21650 42f1f1379d9c856e1274570028928d2b 129 Gene3D G3DSA:3.30.1360.120 17 63 9.8E-7 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS21650 42f1f1379d9c856e1274570028928d2b 129 Pfam PF01571 Aminomethyltransferase folate-binding domain 18 123 1.0E-29 T 14-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMK01_RS21650 42f1f1379d9c856e1274570028928d2b 129 SUPERFAMILY SSF103025 1 125 8.95E-36 T 14-09-2016 AMK01_RS10670 7ca165c915ca00e48ffe7c9cfc39389f 242 PIRSF PIRSF000851 4 242 2.8E-88 T 14-09-2016 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 AMK01_RS10670 7ca165c915ca00e48ffe7c9cfc39389f 242 Pfam PF01066 CDP-alcohol phosphatidyltransferase 21 85 8.1E-6 T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK01_RS01975 a7f41a9b7b6f6175c5e8cb7f677615a9 400 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 26 361 4.5E-88 T 14-09-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- AMK01_RS01975 a7f41a9b7b6f6175c5e8cb7f677615a9 400 Pfam PF04055 Radical SAM superfamily 28 197 2.8E-21 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS01975 a7f41a9b7b6f6175c5e8cb7f677615a9 400 SUPERFAMILY SSF102114 14 398 1.96E-107 T 14-09-2016 AMK01_RS01975 a7f41a9b7b6f6175c5e8cb7f677615a9 400 Pfam PF06969 HemN C-terminal domain 329 389 2.0E-8 T 14-09-2016 IPR010723 HemN, C-terminal AMK01_RS01975 a7f41a9b7b6f6175c5e8cb7f677615a9 400 PANTHER PTHR13932 21 399 1.3E-137 T 14-09-2016 AMK01_RS01975 a7f41a9b7b6f6175c5e8cb7f677615a9 400 SMART SM00729 23 243 6.9E-54 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK01_RS01975 a7f41a9b7b6f6175c5e8cb7f677615a9 400 Gene3D G3DSA:3.80.30.20 25 231 2.0E-32 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 Pfam PF01479 S4 domain 7 45 1.4E-8 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 SMART SM00363 7 72 3.2E-8 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 Gene3D G3DSA:3.40.50.150 95 160 1.1E-4 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 8 240 1.5E-56 T 14-09-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 PANTHER PTHR32319 1 243 2.3E-96 T 14-09-2016 AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 PIRSF PIRSF005578 2 248 2.6E-86 T 14-09-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 SUPERFAMILY SSF53335 61 245 6.31E-22 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 SUPERFAMILY SSF55174 6 57 1.62E-11 T 14-09-2016 AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 PANTHER PTHR32319:SF0 1 243 2.3E-96 T 14-09-2016 AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 Gene3D G3DSA:3.10.290.10 7 94 8.0E-21 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS04640 c74b706caa1dfd7d10e664d1ad8b7abd 248 Pfam PF01728 FtsJ-like methyltransferase 63 244 1.6E-21 T 14-09-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 2.0E-19 T 14-09-2016 AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 PANTHER PTHR30154 1 151 8.1E-55 T 14-09-2016 AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 4.9E-22 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 PANTHER PTHR30154:SF28 1 151 8.1E-55 T 14-09-2016 AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 Gene3D G3DSA:3.30.70.920 57 151 7.9E-27 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 Gene3D G3DSA:1.10.10.10 2 55 3.1E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 SMART SM00344 4 113 2.3E-45 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 SUPERFAMILY SSF54909 64 151 1.13E-20 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 SUPERFAMILY SSF46785 4 64 3.66E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 7.8E-17 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 7.8E-17 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS08940 2695ef507fbfbb611bc30faec6b6d659 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 7.8E-17 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 SUPERFAMILY SSF51556 51 380 5.26E-112 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 SUPERFAMILY SSF51338 345 455 4.12E-35 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 PANTHER PTHR11647:SF69 1 484 1.5E-269 T 14-09-2016 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 Pfam PF01979 Amidohydrolase family 47 412 1.7E-27 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 PANTHER PTHR11647 1 484 1.5E-269 T 14-09-2016 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 Gene3D G3DSA:2.30.40.10 3 65 3.5E-31 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 Gene3D G3DSA:2.30.40.10 374 457 1.4E-15 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 SUPERFAMILY SSF51338 1 64 1.71E-17 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 452 1.9E-181 T 14-09-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 AMK01_RS16925 2ef554197622b7d1f9aec7060232f2d5 484 Gene3D G3DSA:3.20.20.140 66 373 5.6E-126 T 14-09-2016 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 5 256 2.4E-94 T 14-09-2016 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 Gene3D G3DSA:3.40.190.80 154 256 1.9E-19 T 14-09-2016 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 SUPERFAMILY SSF56655 4 256 7.33E-67 T 14-09-2016 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 PANTHER PTHR20854:SF38 1 257 6.2E-86 T 14-09-2016 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 14-09-2016 IPR020583 Inositol monophosphatase, metal-binding site AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 Pfam PF00459 Inositol monophosphatase family 17 256 1.8E-43 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 Gene3D G3DSA:3.30.540.10 7 153 1.2E-38 T 14-09-2016 AMK01_RS18425 abddcd789b1d089f04bae6b85ed5e19a 257 PANTHER PTHR20854 1 257 6.2E-86 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 192 491 2.1E-106 T 14-09-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 PIRSF PIRSF000110 1 494 2.1E-157 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 SUPERFAMILY SSF55347 185 491 6.54E-107 T 14-09-2016 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 492 77.952 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 492 2.8E-166 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 12 190 4.8E-51 T 14-09-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 180 186 - T 14-09-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 Gene3D G3DSA:3.40.50.720 7 190 6.8E-55 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 PANTHER PTHR23429:SF0 6 502 2.0E-204 T 14-09-2016 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 240 256 3.9E-42 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 146 159 3.9E-42 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 198 3.9E-42 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 331 357 3.9E-42 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 222 239 3.9E-42 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 PANTHER PTHR23429 6 502 2.0E-204 T 14-09-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 Gene3D G3DSA:3.30.360.10 191 491 3.0E-111 T 14-09-2016 AMK01_RS06105 7f70b30719ac74e91393b05abfa2453e 509 SUPERFAMILY SSF51735 5 193 2.56E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15195 117867707019453bd90491fd304e913d 443 Pfam PF00375 Sodium:dicarboxylate symporter family 22 414 2.2E-113 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 SUPERFAMILY SSF118215 22 415 2.09E-120 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 49 64 - T 14-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 Gene3D G3DSA:1.10.3860.10 19 419 2.0E-120 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 PANTHER PTHR11958:SF49 18 435 1.7E-243 T 14-09-2016 AMK01_RS15195 117867707019453bd90491fd304e913d 443 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 15 441 38.937 T 14-09-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AMK01_RS15195 117867707019453bd90491fd304e913d 443 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 308 331 - T 14-09-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 PANTHER PTHR11958 18 435 1.7E-243 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 PRINTS PR00173 Glutamate-aspartate symporter signature 87 112 2.2E-26 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 PRINTS PR00173 Glutamate-aspartate symporter signature 158 180 2.2E-26 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 PRINTS PR00173 Glutamate-aspartate symporter signature 305 331 2.2E-26 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.2E-26 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS15195 117867707019453bd90491fd304e913d 443 PRINTS PR00173 Glutamate-aspartate symporter signature 340 359 2.2E-26 T 14-09-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK01_RS03835 bc9901bfaa6256badc91904e8a3612bf 293 SUPERFAMILY SSF46785 1 111 2.5E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03835 bc9901bfaa6256badc91904e8a3612bf 293 PANTHER PTHR30579 1 291 1.2E-68 T 14-09-2016 AMK01_RS03835 bc9901bfaa6256badc91904e8a3612bf 293 PANTHER PTHR30579:SF3 1 291 1.2E-68 T 14-09-2016 AMK01_RS03835 bc9901bfaa6256badc91904e8a3612bf 293 Pfam PF03466 LysR substrate binding domain 89 284 2.1E-32 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS03835 bc9901bfaa6256badc91904e8a3612bf 293 Gene3D G3DSA:1.10.10.10 1 84 1.5E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03835 bc9901bfaa6256badc91904e8a3612bf 293 Gene3D G3DSA:3.40.190.10 91 190 1.4E-20 T 14-09-2016 AMK01_RS03835 bc9901bfaa6256badc91904e8a3612bf 293 SUPERFAMILY SSF53850 89 287 2.53E-34 T 14-09-2016 AMK01_RS03835 bc9901bfaa6256badc91904e8a3612bf 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 7.5E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS19790 c89de968ea94e1e54edf4a4abc959b87 2140 PANTHER PTHR36985 1672 2095 3.0E-19 T 14-09-2016 AMK01_RS19790 c89de968ea94e1e54edf4a4abc959b87 2140 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1793 2140 4.0E-53 T 14-09-2016 IPR007452 Translocation and assembly module TamB AMK01_RS13890 9a593c263d13492d7b2d290249e64b0f 132 Pfam PF01475 Ferric uptake regulator family 6 123 2.2E-9 T 14-09-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK01_RS13890 9a593c263d13492d7b2d290249e64b0f 132 PANTHER PTHR33202:SF6 5 132 2.4E-27 T 14-09-2016 AMK01_RS13890 9a593c263d13492d7b2d290249e64b0f 132 SUPERFAMILY SSF46785 5 128 6.93E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13890 9a593c263d13492d7b2d290249e64b0f 132 PANTHER PTHR33202 5 132 2.4E-27 T 14-09-2016 AMK01_RS13890 9a593c263d13492d7b2d290249e64b0f 132 Gene3D G3DSA:1.10.10.10 6 61 2.7E-6 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15235 51cd08cf709363d64b22b31a276c8f34 374 SUPERFAMILY SSF51395 1 371 9.62E-120 T 14-09-2016 AMK01_RS15235 51cd08cf709363d64b22b31a276c8f34 374 PANTHER PTHR22893 1 372 1.5E-172 T 14-09-2016 AMK01_RS15235 51cd08cf709363d64b22b31a276c8f34 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 349 1.3E-87 T 14-09-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMK01_RS15235 51cd08cf709363d64b22b31a276c8f34 374 Gene3D G3DSA:3.20.20.70 2 369 1.0E-129 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS15235 51cd08cf709363d64b22b31a276c8f34 374 PANTHER PTHR22893:SF14 1 372 1.5E-172 T 14-09-2016 AMK01_RS07515 0694f1fad9722545513766f1367af857 298 PANTHER PTHR11795 1 298 1.7E-20 T 14-09-2016 AMK01_RS07515 0694f1fad9722545513766f1367af857 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 288 7.3E-24 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 Pfam PF01061 ABC-2 type transporter 7 216 3.0E-34 T 14-09-2016 IPR013525 ABC-2 type transporter GO:0016020 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 PANTHER PTHR30413 1 253 1.6E-109 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 8.4E-11 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 8.4E-11 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 8.4E-11 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 8.4E-11 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 8.4E-11 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 PANTHER PTHR30413:SF5 1 253 1.6E-109 T 14-09-2016 AMK01_RS12530 271bd08e4baffbdd24965b64f0abd778 253 PIRSF PIRSF006648 10 249 5.5E-29 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 Pfam PF00226 DnaJ domain 3 65 3.1E-21 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 Pfam PF01556 DnaJ C terminal domain 263 379 2.5E-19 T 14-09-2016 IPR002939 Chaperone DnaJ, C-terminal AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PANTHER PTHR24078 1 68 8.5E-44 T 14-09-2016 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 SUPERFAMILY SSF46565 2 67 3.14E-21 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 SMART SM00271 2 60 3.9E-22 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 SUPERFAMILY SSF49493 308 386 6.8E-11 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PANTHER PTHR24078:SF261 117 150 8.5E-44 T 14-09-2016 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PANTHER PTHR24078:SF261 1 68 8.5E-44 T 14-09-2016 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PANTHER PTHR24078:SF261 199 398 8.5E-44 T 14-09-2016 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 14-09-2016 IPR018253 DnaJ domain, conserved site AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 Gene3D G3DSA:2.60.260.20 233 304 6.9E-9 T 14-09-2016 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PANTHER PTHR24078 117 150 8.5E-44 T 14-09-2016 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PANTHER PTHR24078 199 398 8.5E-44 T 14-09-2016 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 SUPERFAMILY SSF49493 235 317 6.41E-12 T 14-09-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 Gene3D G3DSA:2.60.260.20 307 380 6.7E-12 T 14-09-2016 AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 Gene3D G3DSA:1.10.287.110 2 78 3.4E-23 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PRINTS PR00625 DnaJ domain signature 23 38 3.3E-14 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PRINTS PR00625 DnaJ domain signature 40 60 3.3E-14 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS04780 491f96f81ce59d1815dda6e355afaf55 402 PRINTS PR00625 DnaJ domain signature 5 23 3.3E-14 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 Gene3D G3DSA:1.20.5.840 92 129 3.2E-18 T 14-09-2016 AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 SUPERFAMILY SSF53335 111 337 6.14E-37 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 PIRSF PIRSF005739 13 340 4.8E-9 T 14-09-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 Gene3D G3DSA:3.40.50.150 145 336 6.4E-46 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 PANTHER PTHR11746:SF104 1 337 6.1E-28 T 14-09-2016 AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 Pfam PF00891 O-methyltransferase 137 325 6.9E-15 T 14-09-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 SUPERFAMILY SSF46785 17 96 9.8E-10 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 Pfam PF16864 Dimerisation domain 23 98 1.2E-6 T 14-09-2016 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 PANTHER PTHR11746 1 337 6.1E-28 T 14-09-2016 AMK01_RS04035 55429118a91576631bc3d2e566b9cc30 340 Gene3D G3DSA:1.10.10.10 13 89 1.9E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 SUPERFAMILY SSF52172 11 140 3.27E-40 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 Gene3D G3DSA:3.40.50.2300 11 134 4.2E-39 T 14-09-2016 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 Gene3D G3DSA:1.10.10.10 243 299 3.1E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 Pfam PF00072 Response regulator receiver domain 11 123 3.7E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 SUPERFAMILY SSF46894 226 299 1.22E-18 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 PANTHER PTHR26402 9 140 1.9E-57 T 14-09-2016 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 SMART SM00421 241 298 6.1E-22 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 SMART SM00448 9 122 3.1E-37 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 244 258 1.1E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 274 286 1.1E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 258 274 1.1E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 PANTHER PTHR26402:SF50 219 298 1.9E-57 T 14-09-2016 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 PANTHER PTHR26402:SF50 9 140 1.9E-57 T 14-09-2016 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 Pfam PF00196 Bacterial regulatory proteins, luxR family 243 298 7.0E-19 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS17065 4dfaedfa22439a3b38744206f2182ff6 305 PANTHER PTHR26402 219 298 1.9E-57 T 14-09-2016 AMK01_RS16585 d77930585cac10e8c46ccbd2c9804f85 168 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 85 119 4.1E-15 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS16585 d77930585cac10e8c46ccbd2c9804f85 168 PANTHER PTHR23416 33 136 1.0E-23 T 14-09-2016 AMK01_RS16585 d77930585cac10e8c46ccbd2c9804f85 168 SUPERFAMILY SSF51161 26 140 5.13E-30 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS16585 d77930585cac10e8c46ccbd2c9804f85 168 Gene3D G3DSA:2.160.10.10 56 161 4.6E-29 T 14-09-2016 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 SUPERFAMILY SSF46689 385 436 9.86E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 SMART SM00382 165 308 4.2E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 Gene3D G3DSA:1.10.10.60 369 436 2.3E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 Pfam PF00072 Response regulator receiver domain 6 113 1.1E-29 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 PANTHER PTHR32071:SF11 1 444 3.9E-187 T 14-09-2016 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 SMART SM00448 4 115 1.3E-35 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 Gene3D G3DSA:3.40.50.2300 2 127 4.3E-39 T 14-09-2016 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 Gene3D G3DSA:3.40.50.300 144 316 8.3E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 SUPERFAMILY SSF52540 147 374 1.2E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 Pfam PF00158 Sigma-54 interaction domain 147 311 3.1E-59 T 14-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 14-09-2016 IPR025944 Sigma-54 interaction domain, conserved site AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 Gene3D G3DSA:1.10.8.60 318 368 6.9E-16 T 14-09-2016 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 Pfam PF02954 Bacterial regulatory protein, Fis family 393 433 9.7E-8 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 SUPERFAMILY SSF52172 1 189 8.68E-45 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS17720 e7d179b65159db4270b0e33cf2eb8aac 444 PANTHER PTHR32071 1 444 3.9E-187 T 14-09-2016 AMK01_RS00750 e1f29ed22d627d9bdc45fde42b14e693 543 Gene3D G3DSA:1.20.1250.20 228 397 8.2E-10 T 14-09-2016 AMK01_RS00750 e1f29ed22d627d9bdc45fde42b14e693 543 Pfam PF05977 Transmembrane secretion effector 6 525 9.7E-220 T 14-09-2016 IPR010290 Transmembrane secretion effector AMK01_RS00750 e1f29ed22d627d9bdc45fde42b14e693 543 SUPERFAMILY SSF103473 17 398 2.49E-48 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS00750 e1f29ed22d627d9bdc45fde42b14e693 543 PANTHER PTHR23513 6 428 6.5E-114 T 14-09-2016 AMK01_RS00750 e1f29ed22d627d9bdc45fde42b14e693 543 Gene3D G3DSA:1.20.1250.20 20 202 8.6E-21 T 14-09-2016 AMK01_RS00750 e1f29ed22d627d9bdc45fde42b14e693 543 PANTHER PTHR23513:SF7 6 428 6.5E-114 T 14-09-2016 AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.4E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.4E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.4E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.4E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.4E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.4E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 SUPERFAMILY SSF51735 5 252 8.25E-78 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 Gene3D G3DSA:3.40.50.720 2 252 2.1E-76 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PANTHER PTHR24322 11 139 1.6E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PANTHER PTHR24322 156 187 1.6E-46 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 251 5.5E-63 T 14-09-2016 AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 0.0026 T 14-09-2016 AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.6E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12280 2c05dd7c5fb151798655bad03b9921a1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.6E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04870 7442511fc4a6fee4af2fef2a6c7c5193 228 Pfam PF02660 Glycerol-3-phosphate acyltransferase 13 207 1.6E-48 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS04870 7442511fc4a6fee4af2fef2a6c7c5193 228 PANTHER PTHR30309 4 78 2.0E-58 T 14-09-2016 AMK01_RS04870 7442511fc4a6fee4af2fef2a6c7c5193 228 PANTHER PTHR30309 102 217 2.0E-58 T 14-09-2016 AMK01_RS04870 7442511fc4a6fee4af2fef2a6c7c5193 228 SMART SM01207 12 208 4.9E-77 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS04870 7442511fc4a6fee4af2fef2a6c7c5193 228 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 8 216 1.8E-53 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS04870 7442511fc4a6fee4af2fef2a6c7c5193 228 PANTHER PTHR30309:SF0 4 78 2.0E-58 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS04870 7442511fc4a6fee4af2fef2a6c7c5193 228 PANTHER PTHR30309:SF0 102 217 2.0E-58 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS04870 7442511fc4a6fee4af2fef2a6c7c5193 228 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 9 216 19.544 T 14-09-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK01_RS17295 3d18550233fc386510a6db060edc1c17 154 Gene3D G3DSA:1.10.10.10 1 136 7.7E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17295 3d18550233fc386510a6db060edc1c17 154 PANTHER PTHR33221 1 145 3.0E-46 T 14-09-2016 AMK01_RS17295 3d18550233fc386510a6db060edc1c17 154 PANTHER PTHR33221:SF1 1 145 3.0E-46 T 14-09-2016 AMK01_RS17295 3d18550233fc386510a6db060edc1c17 154 Pfam PF02082 Transcriptional regulator 1 81 4.4E-22 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS17295 3d18550233fc386510a6db060edc1c17 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 135 7.1E-32 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS17295 3d18550233fc386510a6db060edc1c17 154 SUPERFAMILY SSF46785 1 136 1.56E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17295 3d18550233fc386510a6db060edc1c17 154 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-09-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 Pfam PF00034 Cytochrome c 33 130 9.7E-9 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 PANTHER PTHR11961 7 132 1.1E-37 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 SUPERFAMILY SSF46626 28 132 9.6E-35 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 PRINTS PR00604 Class IA and IB cytochrome C signature 53 68 2.8E-23 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 PRINTS PR00604 Class IA and IB cytochrome C signature 41 48 2.8E-23 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 PRINTS PR00604 Class IA and IB cytochrome C signature 69 79 2.8E-23 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 PRINTS PR00604 Class IA and IB cytochrome C signature 105 115 2.8E-23 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 PRINTS PR00604 Class IA and IB cytochrome C signature 86 102 2.8E-23 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 PRINTS PR00604 Class IA and IB cytochrome C signature 122 130 2.8E-23 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS13445 c3e16a66ad2b259fe44b27cbfd15e236 133 Gene3D G3DSA:1.10.760.10 28 132 1.3E-40 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Pfam PF00623 RNA polymerase Rpb1, domain 2 346 487 2.4E-34 T 14-09-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Pfam PF04998 RNA polymerase Rpb1, domain 5 763 1310 1.2E-72 T 14-09-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Pfam PF04983 RNA polymerase Rpb1, domain 3 491 644 3.3E-26 T 14-09-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1018 0.0 T 14-09-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 759 3.3E-18 T 14-09-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1371 10.305 T 14-09-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 SUPERFAMILY SSF64484 1127 1358 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 SUPERFAMILY SSF64484 17 941 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 PANTHER PTHR19376:SF32 5 940 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 PANTHER PTHR19376 961 1151 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 PANTHER PTHR19376 1298 1357 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 PANTHER PTHR19376 5 940 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 PANTHER PTHR19376 1171 1257 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 SMART SM00663 237 516 6.8E-180 T 14-09-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Gene3D G3DSA:2.40.50.100 1149 1203 1.2E-7 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Gene3D G3DSA:2.40.50.100 975 1013 2.5E-4 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 344 1.9E-89 T 14-09-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 14 638 32.055 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Gene3D G3DSA:2.40.40.20 419 491 1.6E-37 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 Gene3D G3DSA:2.40.40.20 351 378 1.6E-37 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 PANTHER PTHR19376:SF32 961 1151 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 PANTHER PTHR19376:SF32 1298 1357 0.0 T 14-09-2016 AMK01_RS08415 982e5c639c5745654e895e61a84f2264 1402 PANTHER PTHR19376:SF32 1171 1257 0.0 T 14-09-2016 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 Pfam PF01479 S4 domain 95 141 3.5E-17 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 PANTHER PTHR11831:SF4 1 205 6.9E-73 T 14-09-2016 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 SUPERFAMILY SSF55174 5 205 3.93E-61 T 14-09-2016 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 32.045 T 14-09-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 SMART SM00363 94 158 5.3E-18 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 14-09-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 Gene3D G3DSA:1.10.1050.10 1 96 4.1E-33 T 14-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 SMART SM01390 3 93 2.4E-37 T 14-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 Gene3D G3DSA:3.10.290.10 97 192 1.5E-29 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 PANTHER PTHR11831 1 205 6.9E-73 T 14-09-2016 IPR022801 Ribosomal protein S4/S9 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 6 205 5.1E-70 T 14-09-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK01_RS11840 93e507c978467e3775c0b7d443d4174d 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 93 8.8E-22 T 14-09-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK01_RS19090 50045fb221c53caf7a62f10c0b9f1a56 327 SUPERFAMILY SSF53822 25 324 2.94E-61 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS19090 50045fb221c53caf7a62f10c0b9f1a56 327 PIRSF PIRSF002816 2 326 2.3E-131 T 14-09-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 AMK01_RS19090 50045fb221c53caf7a62f10c0b9f1a56 327 PANTHER PTHR30036 20 305 2.5E-43 T 14-09-2016 AMK01_RS19090 50045fb221c53caf7a62f10c0b9f1a56 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 27 304 7.0E-41 T 14-09-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain AMK01_RS19090 50045fb221c53caf7a62f10c0b9f1a56 327 PANTHER PTHR30036:SF1 20 305 2.5E-43 T 14-09-2016 AMK01_RS19090 50045fb221c53caf7a62f10c0b9f1a56 327 Gene3D G3DSA:3.40.50.2300 24 147 1.9E-38 T 14-09-2016 AMK01_RS19090 50045fb221c53caf7a62f10c0b9f1a56 327 Gene3D G3DSA:3.40.50.2300 148 298 3.4E-43 T 14-09-2016 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 SUPERFAMILY SSF51215 48 159 1.44E-20 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 Gene3D G3DSA:1.10.10.60 192 245 1.2E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 Pfam PF02311 AraC-like ligand binding domain 40 165 1.8E-26 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 1.8E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 1.8E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 SUPERFAMILY SSF46689 244 289 2.58E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 SUPERFAMILY SSF46689 192 241 6.72E-6 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 Gene3D G3DSA:2.60.120.280 44 144 3.8E-15 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 Pfam PF12833 Helix-turn-helix domain 216 289 2.0E-20 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 286 - T 14-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 PANTHER PTHR11019:SF111 37 298 9.8E-52 T 14-09-2016 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 SMART SM00342 208 290 2.4E-19 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 Gene3D G3DSA:1.10.10.60 246 289 9.2E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14415 0c4caeabee6f1842908805ed75067f98 304 PANTHER PTHR11019 37 298 9.8E-52 T 14-09-2016 AMK01_RS17910 aaea3e296cbc86d5c57af65ad15b6d1b 195 SUPERFAMILY SSF100950 6 190 5.86E-45 T 14-09-2016 AMK01_RS17910 aaea3e296cbc86d5c57af65ad15b6d1b 195 Gene3D G3DSA:3.40.50.10420 7 188 3.6E-46 T 14-09-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AMK01_RS17910 aaea3e296cbc86d5c57af65ad15b6d1b 195 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 184 1.8E-43 T 14-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK01_RS17910 aaea3e296cbc86d5c57af65ad15b6d1b 195 PANTHER PTHR23407:SF1 1 186 1.7E-42 T 14-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK01_RS17910 aaea3e296cbc86d5c57af65ad15b6d1b 195 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 184 1.9E-33 T 14-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK01_RS17910 aaea3e296cbc86d5c57af65ad15b6d1b 195 PANTHER PTHR23407 1 186 1.7E-42 T 14-09-2016 AMK01_RS17910 aaea3e296cbc86d5c57af65ad15b6d1b 195 PIRSF PIRSF006806 2 186 2.2E-33 T 14-09-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 SUPERFAMILY SSF46689 190 241 2.02E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 Gene3D G3DSA:2.60.120.10 6 85 8.4E-4 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 Gene3D G3DSA:1.10.10.60 245 291 1.5E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 SMART SM00342 207 290 2.4E-34 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 Gene3D G3DSA:1.10.10.60 188 244 8.1E-22 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 Pfam PF12833 Helix-turn-helix domain 213 291 2.8E-24 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 PANTHER PTHR11019:SF105 49 291 5.3E-37 T 14-09-2016 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 SUPERFAMILY SSF46689 243 291 4.44E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 14-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 3.3E-7 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 3.3E-7 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS10425 d5e168908b9f8377eff6f271ace17d96 295 PANTHER PTHR11019 49 291 5.3E-37 T 14-09-2016 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 SUPERFAMILY SSF52172 5 137 1.71E-28 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 Gene3D G3DSA:3.40.50.180 153 340 2.0E-77 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 340 39.05 T 14-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 PANTHER PTHR24421 6 336 1.6E-116 T 14-09-2016 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 PIRSF PIRSF000876 2 344 1.2E-129 T 14-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 Gene3D G3DSA:3.40.50.2300 4 136 1.3E-29 T 14-09-2016 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 SMART SM00448 5 124 2.3E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 Pfam PF00072 Response regulator receiver domain 7 109 4.0E-23 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 SUPERFAMILY SSF52738 154 339 3.66E-67 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 PANTHER PTHR24421:SF21 6 336 1.6E-116 T 14-09-2016 AMK01_RS03405 db9499ea071310e859194ab8f1e45fbf 347 Pfam PF01339 CheB methylesterase 157 335 6.2E-58 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS17510 85b6249f05d9e4b5e1524f8e85f695cb 178 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 81 139 2.0E-27 T 14-09-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AMK01_RS17510 85b6249f05d9e4b5e1524f8e85f695cb 178 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 113 134 - T 14-09-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 AMK01_RS17510 85b6249f05d9e4b5e1524f8e85f695cb 178 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 3 160 31.304 T 14-09-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AMK01_RS17510 85b6249f05d9e4b5e1524f8e85f695cb 178 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 33 151 1.5E-47 T 14-09-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 AMK01_RS17510 85b6249f05d9e4b5e1524f8e85f695cb 178 PANTHER PTHR10884 10 153 8.0E-59 T 14-09-2016 AMK01_RS17510 85b6249f05d9e4b5e1524f8e85f695cb 178 SUPERFAMILY SSF143243 11 156 8.5E-53 T 14-09-2016 AMK01_RS17510 85b6249f05d9e4b5e1524f8e85f695cb 178 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 153 1.2E-47 T 14-09-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 AMK01_RS04355 d1c44a24e0e1d3965623775519b84c67 210 Pfam PF01081 KDPG and KHG aldolase 11 187 6.2E-27 T 14-09-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMK01_RS04355 d1c44a24e0e1d3965623775519b84c67 210 PANTHER PTHR30246:SF1 1 210 1.5E-63 T 14-09-2016 AMK01_RS04355 d1c44a24e0e1d3965623775519b84c67 210 Gene3D G3DSA:3.20.20.70 10 205 6.0E-60 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS04355 d1c44a24e0e1d3965623775519b84c67 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 14-09-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMK01_RS04355 d1c44a24e0e1d3965623775519b84c67 210 SUPERFAMILY SSF51569 9 204 1.34E-53 T 14-09-2016 AMK01_RS04355 d1c44a24e0e1d3965623775519b84c67 210 PANTHER PTHR30246 1 210 1.5E-63 T 14-09-2016 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 SUPERFAMILY SSF52540 8 230 5.59E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 SUPERFAMILY SSF52540 357 404 5.59E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Pfam PF07517 SecA DEAD-like domain 9 390 9.7E-132 T 14-09-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PANTHER PTHR30612 7 510 0.0 T 14-09-2016 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PANTHER PTHR30612 546 903 0.0 T 14-09-2016 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Gene3D G3DSA:3.40.50.300 358 404 1.5E-125 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Gene3D G3DSA:3.40.50.300 6 230 1.5E-125 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 SMART SM00958 230 347 7.7E-74 T 14-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 SUPERFAMILY SSF52540 406 614 9.69E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 ProSitePatterns PS01312 SecA family signature. 490 505 - T 14-09-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 SUPERFAMILY SSF81886 878 890 5.36E-79 T 14-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 SUPERFAMILY SSF81886 616 835 5.36E-79 T 14-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Pfam PF07516 SecA Wing and Scaffold domain 613 824 1.1E-64 T 14-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Pfam PF02810 SEC-C motif 882 899 3.1E-10 T 14-09-2016 IPR004027 SEC-C motif AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 7 827 20.008 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 SUPERFAMILY SSF81767 229 357 1.44E-42 T 14-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Gene3D G3DSA:3.40.50.300 406 614 1.1E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Pfam PF01043 SecA preprotein cross-linking domain 234 347 3.7E-37 T 14-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Gene3D G3DSA:3.90.1440.10 233 357 3.3E-45 T 14-09-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 Gene3D G3DSA:1.10.3060.10 644 825 2.7E-55 T 14-09-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PRINTS PR00906 SecA protein signature 328 350 1.7E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PRINTS PR00906 SecA protein signature 103 117 1.7E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PRINTS PR00906 SecA protein signature 402 415 1.7E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PRINTS PR00906 SecA protein signature 65 89 1.7E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PRINTS PR00906 SecA protein signature 172 192 1.7E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PRINTS PR00906 SecA protein signature 365 382 1.7E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 PRINTS PR00906 SecA protein signature 119 129 1.7E-69 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 30 812 0.0 T 14-09-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMK01_RS19385 2826d138f159c68ce63c282131d7c475 904 SMART SM00957 8 391 7.2E-299 T 14-09-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMK01_RS00700 05c49cbe8fdcc985203d1e48bad2820c 338 PANTHER PTHR18895 172 319 2.8E-31 T 14-09-2016 AMK01_RS00700 05c49cbe8fdcc985203d1e48bad2820c 338 PANTHER PTHR18895:SF70 172 319 2.8E-31 T 14-09-2016 AMK01_RS00700 05c49cbe8fdcc985203d1e48bad2820c 338 Gene3D G3DSA:3.40.50.150 166 314 6.5E-20 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS00700 05c49cbe8fdcc985203d1e48bad2820c 338 SUPERFAMILY SSF53335 163 316 4.3E-24 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS00700 05c49cbe8fdcc985203d1e48bad2820c 338 Pfam PF08468 Methyltransferase small domain N-terminal 63 127 1.3E-5 T 14-09-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS00700 05c49cbe8fdcc985203d1e48bad2820c 338 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 267 273 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK01_RS00700 05c49cbe8fdcc985203d1e48bad2820c 338 Pfam PF05175 Methyltransferase small domain 166 334 6.5E-51 T 14-09-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK01_RS13350 1ed368f2dfdf939fff0f643a1ecb35f4 467 Gene3D G3DSA:3.40.640.10 80 350 5.1E-77 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS13350 1ed368f2dfdf939fff0f643a1ecb35f4 467 SUPERFAMILY SSF53383 7 462 9.91E-99 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS13350 1ed368f2dfdf939fff0f643a1ecb35f4 467 Gene3D G3DSA:3.90.1150.10 351 461 8.0E-21 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS13350 1ed368f2dfdf939fff0f643a1ecb35f4 467 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 39 391 1.8E-38 T 14-09-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AMK01_RS13350 1ed368f2dfdf939fff0f643a1ecb35f4 467 PANTHER PTHR11999 43 457 6.0E-66 T 14-09-2016 AMK01_RS24995 22ed32776fcdbdb9b0e5643726035fe6 348 SUPERFAMILY SSF53850 4 338 2.75E-42 T 14-09-2016 AMK01_RS24995 22ed32776fcdbdb9b0e5643726035fe6 348 PANTHER PTHR30061 2 348 2.3E-35 T 14-09-2016 AMK01_RS24995 22ed32776fcdbdb9b0e5643726035fe6 348 Gene3D G3DSA:3.40.190.10 91 253 5.0E-16 T 14-09-2016 AMK01_RS24995 22ed32776fcdbdb9b0e5643726035fe6 348 Gene3D G3DSA:3.40.190.10 254 294 7.1E-19 T 14-09-2016 AMK01_RS24995 22ed32776fcdbdb9b0e5643726035fe6 348 Gene3D G3DSA:3.40.190.10 3 80 7.1E-19 T 14-09-2016 AMK01_RS24995 22ed32776fcdbdb9b0e5643726035fe6 348 PANTHER PTHR30061:SF1 2 348 2.3E-35 T 14-09-2016 AMK01_RS24995 22ed32776fcdbdb9b0e5643726035fe6 348 Pfam PF13416 Bacterial extracellular solute-binding protein 5 266 3.0E-21 T 14-09-2016 AMK01_RS05735 9344db071545d0d1b51845aad8b62cd4 260 PANTHER PTHR10108 32 195 2.3E-21 T 14-09-2016 AMK01_RS05735 9344db071545d0d1b51845aad8b62cd4 260 SUPERFAMILY SSF53335 30 211 3.7E-35 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05735 9344db071545d0d1b51845aad8b62cd4 260 PANTHER PTHR10108:SF779 32 195 2.3E-21 T 14-09-2016 AMK01_RS05735 9344db071545d0d1b51845aad8b62cd4 260 Pfam PF13489 Methyltransferase domain 46 186 8.1E-16 T 14-09-2016 AMK01_RS05735 9344db071545d0d1b51845aad8b62cd4 260 Gene3D G3DSA:3.40.50.150 37 217 2.8E-35 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 PANTHER PTHR19288 5 281 6.4E-62 T 14-09-2016 AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 Pfam PF13344 Haloacid dehalogenase-like hydrolase 18 115 5.5E-18 T 14-09-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 10 243 5.9E-43 T 14-09-2016 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 SUPERFAMILY SSF56784 15 255 2.21E-44 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 Gene3D G3DSA:3.40.50.1000 4 83 7.5E-29 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 Gene3D G3DSA:3.40.50.1000 191 253 7.5E-29 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 18 246 8.7E-43 T 14-09-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 Pfam PF13242 HAD-hyrolase-like 192 252 6.9E-9 T 14-09-2016 AMK01_RS04240 99cabfc44bcd5d7eb0b9a76bc28f9298 282 PANTHER PTHR19288:SF3 5 281 6.4E-62 T 14-09-2016 AMK01_RS07895 d22044775df39f5909159abf44bd12f7 191 Gene3D G3DSA:3.30.1950.10 47 111 2.4E-21 T 14-09-2016 AMK01_RS07895 d22044775df39f5909159abf44bd12f7 191 Pfam PF10531 SLBB domain 118 165 7.9E-9 T 14-09-2016 IPR019554 Soluble ligand binding domain AMK01_RS07895 d22044775df39f5909159abf44bd12f7 191 Pfam PF02563 Polysaccharide biosynthesis/export protein 40 112 7.0E-22 T 14-09-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMK01_RS07895 d22044775df39f5909159abf44bd12f7 191 PANTHER PTHR33619 42 184 7.2E-41 T 14-09-2016 AMK01_RS07895 d22044775df39f5909159abf44bd12f7 191 Gene3D G3DSA:3.10.560.10 112 169 2.3E-13 T 14-09-2016 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 PANTHER PTHR30371 1 274 5.8E-95 T 14-09-2016 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 Pfam PF00902 Sec-independent protein translocase protein (TatC) 14 236 1.4E-69 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 12 241 6.1E-64 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 ProSitePatterns PS01218 TatC family signature. 169 188 - T 14-09-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 6 255 19.04 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 11 38 1.0E-43 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 94 112 1.0E-43 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 112 138 1.0E-43 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 169 197 1.0E-43 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK01_RS09210 ceee69c33b494d24edf5b6783d48bcf5 275 PANTHER PTHR30371:SF0 1 274 5.8E-95 T 14-09-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 SUPERFAMILY SSF56601 279 301 7.32E-121 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 SUPERFAMILY SSF56601 328 658 7.32E-121 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 SUPERFAMILY SSF53955 113 315 1.12E-72 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 PANTHER PTHR32282:SF5 44 653 3.2E-215 T 14-09-2016 AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 136 652 3.5E-188 T 14-09-2016 AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 Pfam PF00912 Transglycosylase 126 297 2.1E-62 T 14-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 Pfam PF00905 Penicillin binding protein transpeptidase domain 390 614 1.3E-30 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 PANTHER PTHR32282 44 653 3.2E-215 T 14-09-2016 AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 Gene3D G3DSA:3.40.710.10 301 663 5.0E-122 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS00885 0b718ae6d90b77669e427cbf66ac60eb 775 Gene3D G3DSA:1.10.3810.10 124 300 1.5E-72 T 14-09-2016 AMK01_RS04895 44084e749add71c3b91abf40798928ca 321 Hamap MF_00301 Homoserine kinase [thrB]. 1 321 173.651 T 14-09-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMK01_RS04895 44084e749add71c3b91abf40798928ca 321 Gene3D G3DSA:3.30.200.20 2 104 5.6E-37 T 14-09-2016 AMK01_RS04895 44084e749add71c3b91abf40798928ca 321 SUPERFAMILY SSF56112 5 312 4.34E-85 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS04895 44084e749add71c3b91abf40798928ca 321 Pfam PF01636 Phosphotransferase enzyme family 28 255 1.4E-33 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AMK01_RS04895 44084e749add71c3b91abf40798928ca 321 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 307 3.8E-121 T 14-09-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMK01_RS04895 44084e749add71c3b91abf40798928ca 321 PANTHER PTHR21064 9 305 3.7E-49 T 14-09-2016 AMK01_RS04895 44084e749add71c3b91abf40798928ca 321 Gene3D G3DSA:3.90.1200.10 106 316 7.3E-75 T 14-09-2016 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 329 412 6.6E-29 T 14-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 46 217 1.4E-51 T 14-09-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 SMART SM00928 327 372 1.8E-23 T 14-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 PANTHER PTHR11780:SF10 1 419 1.8E-224 T 14-09-2016 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 SUPERFAMILY SSF142984 239 322 1.03E-24 T 14-09-2016 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 165 180 - T 14-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 SUPERFAMILY SSF142019 5 237 3.14E-91 T 14-09-2016 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 SUPERFAMILY SSF140490 323 421 2.09E-34 T 14-09-2016 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 PANTHER PTHR11780 1 419 1.8E-224 T 14-09-2016 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 Pfam PF10531 SLBB domain 241 290 5.2E-12 T 14-09-2016 IPR019554 Soluble ligand binding domain AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 340 351 - T 14-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK01_RS17525 74bca136e309f8a86b5f47fea677c032 421 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 6 413 2.2E-197 T 14-09-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 Pfam PF05226 CHASE2 domain 22 314 2.6E-37 T 14-09-2016 IPR007890 CHASE2 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 SUPERFAMILY SSF55073 422 612 1.05E-39 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 PANTHER PTHR11920 419 564 1.3E-21 T 14-09-2016 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 SMART SM01080 33 329 3.7E-50 T 14-09-2016 IPR007890 CHASE2 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 425 572 1.2E-19 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 SMART SM00044 361 597 1.6E-6 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 PANTHER PTHR11920:SF257 419 564 1.3E-21 T 14-09-2016 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 PANTHER PTHR11920:SF257 187 199 1.3E-21 T 14-09-2016 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 PANTHER PTHR11920 187 199 1.3E-21 T 14-09-2016 AMK01_RS11175 09e0e92de37cb41b7aca6cf0f3c6077c 618 Gene3D G3DSA:3.30.70.1230 425 567 1.6E-30 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS11275 213e060bdb4dcb6859a45c0d86fa08ee 148 Pfam PF01592 NifU-like N terminal domain 5 79 3.5E-9 T 14-09-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 AMK01_RS11275 213e060bdb4dcb6859a45c0d86fa08ee 148 Gene3D G3DSA:3.90.1010.10 4 143 7.8E-19 T 14-09-2016 AMK01_RS11275 213e060bdb4dcb6859a45c0d86fa08ee 148 SUPERFAMILY SSF82649 1 141 4.45E-40 T 14-09-2016 AMK01_RS05460 fca5619d1f3e29a60b37af411c2a59f4 161 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 148 5.1E-30 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS05460 fca5619d1f3e29a60b37af411c2a59f4 161 PANTHER PTHR36929:SF1 6 158 5.9E-25 T 14-09-2016 AMK01_RS05460 fca5619d1f3e29a60b37af411c2a59f4 161 SUPERFAMILY SSF55961 9 150 9.02E-45 T 14-09-2016 AMK01_RS05460 fca5619d1f3e29a60b37af411c2a59f4 161 Gene3D G3DSA:3.30.530.20 7 150 1.6E-45 T 14-09-2016 IPR023393 START-like domain AMK01_RS05460 fca5619d1f3e29a60b37af411c2a59f4 161 PANTHER PTHR36929 6 158 5.9E-25 T 14-09-2016 AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 PRINTS PR01021 OMPA domain signature 115 137 5.7E-12 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 PRINTS PR01021 OMPA domain signature 160 176 5.7E-12 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 PRINTS PR01021 OMPA domain signature 145 160 5.7E-12 T 14-09-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 Gene3D G3DSA:3.30.1330.60 95 215 3.3E-40 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 178 197 1.7E-7 T 14-09-2016 AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 160 177 1.7E-7 T 14-09-2016 AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 218 1.7E-7 T 14-09-2016 AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 Pfam PF00691 OmpA family 114 209 3.1E-20 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 PANTHER PTHR30128 47 218 2.9E-57 T 14-09-2016 AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 SUPERFAMILY SSF103088 102 218 6.15E-39 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS14425 e13caa14bd347901cd0353b07a751ac2 221 Pfam PF13441 YMGG-like Gly-zipper 31 79 4.3E-8 T 14-09-2016 IPR027367 YMGG-like Gly-zipper AMK01_RS08200 768d9e788f701408ef4cc0bbd2e28c34 227 SMART SM00382 35 223 9.4E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS08200 768d9e788f701408ef4cc0bbd2e28c34 227 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS08200 768d9e788f701408ef4cc0bbd2e28c34 227 PANTHER PTHR24220:SF111 8 226 2.9E-89 T 14-09-2016 AMK01_RS08200 768d9e788f701408ef4cc0bbd2e28c34 227 Pfam PF00005 ABC transporter 26 174 2.9E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS08200 768d9e788f701408ef4cc0bbd2e28c34 227 SUPERFAMILY SSF52540 6 226 8.73E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08200 768d9e788f701408ef4cc0bbd2e28c34 227 PANTHER PTHR24220 8 226 2.9E-89 T 14-09-2016 AMK01_RS08200 768d9e788f701408ef4cc0bbd2e28c34 227 Gene3D G3DSA:3.40.50.300 5 226 1.2E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 73.833 T 14-09-2016 IPR000037 SsrA-binding protein GO:0003723 AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 Pfam PF01668 SmpB protein 13 77 2.1E-29 T 14-09-2016 IPR000037 SsrA-binding protein GO:0003723 AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 SUPERFAMILY SSF74982 11 138 2.62E-50 T 14-09-2016 IPR023620 Small protein B AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 PANTHER PTHR30308:SF2 1 159 3.9E-78 T 14-09-2016 AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 PANTHER PTHR30308 1 159 3.9E-78 T 14-09-2016 AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 1.0E-59 T 14-09-2016 IPR000037 SsrA-binding protein GO:0003723 AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 Gene3D G3DSA:2.40.280.10 12 133 1.6E-51 T 14-09-2016 IPR023620 Small protein B AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 14-09-2016 IPR020081 SsrA-binding protein, conserved site AMK01_RS07055 04d3c0e80c16b3dea521f12cb2bd14db 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 2.4E-57 T 14-09-2016 IPR000037 SsrA-binding protein GO:0003723 AMK01_RS06225 339530f777b2c5b8d2b52f052ecc3c27 202 PANTHER PTHR15020:SF29 1 202 8.7E-67 T 14-09-2016 AMK01_RS06225 339530f777b2c5b8d2b52f052ecc3c27 202 PANTHER PTHR15020 1 202 8.7E-67 T 14-09-2016 AMK01_RS06225 339530f777b2c5b8d2b52f052ecc3c27 202 SUPERFAMILY SSF51735 1 201 8.56E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06225 339530f777b2c5b8d2b52f052ecc3c27 202 Gene3D G3DSA:3.40.50.720 1 202 3.1E-33 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06225 339530f777b2c5b8d2b52f052ecc3c27 202 Pfam PF13460 NAD(P)H-binding 7 190 1.8E-30 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 SUPERFAMILY SSF47384 228 311 2.94E-20 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 SUPERFAMILY SSF55874 299 464 1.03E-41 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 Gene3D G3DSA:1.10.287.130 246 306 9.1E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 Gene3D G3DSA:3.30.450.20 144 245 2.3E-7 T 14-09-2016 AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 Gene3D G3DSA:3.30.565.10 311 466 6.3E-38 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 PANTHER PTHR24423 112 464 1.1E-86 T 14-09-2016 AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 SMART SM00388 241 310 2.7E-21 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 464 1.0E-23 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 310 5.2E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 SMART SM00387 356 468 5.6E-29 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 8.1E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 8.1E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06440 946ab58fc4fc1f136f229a9cbba4e455 513 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 8.1E-13 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS02775 6559411e3424091b4c314bbe124410bc 364 PANTHER PTHR11241:SF1 1 165 2.0E-33 T 14-09-2016 AMK01_RS02775 6559411e3424091b4c314bbe124410bc 364 SUPERFAMILY SSF51283 8 166 4.97E-31 T 14-09-2016 IPR029054 dUTPase-like AMK01_RS02775 6559411e3424091b4c314bbe124410bc 364 Gene3D G3DSA:2.70.40.10 170 340 1.1E-66 T 14-09-2016 IPR029054 dUTPase-like AMK01_RS02775 6559411e3424091b4c314bbe124410bc 364 Gene3D G3DSA:2.70.40.10 7 169 3.7E-62 T 14-09-2016 IPR029054 dUTPase-like AMK01_RS02775 6559411e3424091b4c314bbe124410bc 364 PANTHER PTHR11241 1 165 2.0E-33 T 14-09-2016 AMK01_RS02775 6559411e3424091b4c314bbe124410bc 364 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 6 363 3.1E-175 T 14-09-2016 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 AMK01_RS02775 6559411e3424091b4c314bbe124410bc 364 SUPERFAMILY SSF51283 199 336 9.55E-21 T 14-09-2016 IPR029054 dUTPase-like AMK01_RS14740 86fa519cfe02b3a9ad5ccdf7fb4b083a 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 14 286 3.9E-101 T 14-09-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK01_RS14740 86fa519cfe02b3a9ad5ccdf7fb4b083a 300 Pfam PF02219 Methylenetetrahydrofolate reductase 10 287 1.5E-87 T 14-09-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK01_RS14740 86fa519cfe02b3a9ad5ccdf7fb4b083a 300 PANTHER PTHR21091:SF31 145 276 1.5E-34 T 14-09-2016 AMK01_RS14740 86fa519cfe02b3a9ad5ccdf7fb4b083a 300 PANTHER PTHR21091 145 276 1.5E-34 T 14-09-2016 AMK01_RS14740 86fa519cfe02b3a9ad5ccdf7fb4b083a 300 Gene3D G3DSA:3.20.20.220 9 291 6.2E-97 T 14-09-2016 IPR029041 FAD-linked oxidoreductase-like AMK01_RS14740 86fa519cfe02b3a9ad5ccdf7fb4b083a 300 SUPERFAMILY SSF51730 5 288 2.75E-90 T 14-09-2016 IPR029041 FAD-linked oxidoreductase-like AMK01_RS06765 d05917f4ea52e32775db19d90bcee6f7 116 Pfam PF03795 YCII-related domain 1 115 9.8E-24 T 14-09-2016 IPR005545 YCII-related AMK01_RS06765 d05917f4ea52e32775db19d90bcee6f7 116 SUPERFAMILY SSF54909 1 115 4.56E-32 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS06765 d05917f4ea52e32775db19d90bcee6f7 116 PANTHER PTHR35174:SF3 2 116 3.7E-33 T 14-09-2016 AMK01_RS06765 d05917f4ea52e32775db19d90bcee6f7 116 Gene3D G3DSA:3.30.70.1060 1 115 2.9E-35 T 14-09-2016 AMK01_RS06765 d05917f4ea52e32775db19d90bcee6f7 116 PANTHER PTHR35174 2 116 3.7E-33 T 14-09-2016 AMK01_RS18735 57f0b63235ddd76c052ba112d7e28e66 196 Pfam PF13527 Acetyltransferase (GNAT) domain 24 144 9.0E-10 T 14-09-2016 AMK01_RS18735 57f0b63235ddd76c052ba112d7e28e66 196 SUPERFAMILY SSF55729 18 147 1.06E-18 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS18735 57f0b63235ddd76c052ba112d7e28e66 196 Gene3D G3DSA:3.40.630.30 17 147 4.1E-16 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS02070 bcba11f7d1bd8717f416f62f6bec84c4 350 Pfam PF02562 PhoH-like protein 133 336 1.8E-91 T 14-09-2016 IPR003714 PhoH-like protein GO:0005524 AMK01_RS02070 bcba11f7d1bd8717f416f62f6bec84c4 350 Gene3D G3DSA:3.40.50.300 131 335 2.3E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02070 bcba11f7d1bd8717f416f62f6bec84c4 350 PANTHER PTHR30473 19 337 5.1E-155 T 14-09-2016 AMK01_RS02070 bcba11f7d1bd8717f416f62f6bec84c4 350 PANTHER PTHR30473:SF1 19 337 5.1E-155 T 14-09-2016 AMK01_RS02070 bcba11f7d1bd8717f416f62f6bec84c4 350 SUPERFAMILY SSF52540 132 311 3.81E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16495 7ed60cc05bc22b962895806986ca7c88 326 PANTHER PTHR10366 3 323 1.8E-94 T 14-09-2016 AMK01_RS16495 7ed60cc05bc22b962895806986ca7c88 326 PANTHER PTHR10366:SF35 3 323 1.8E-94 T 14-09-2016 AMK01_RS16495 7ed60cc05bc22b962895806986ca7c88 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 226 1.0E-45 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS16495 7ed60cc05bc22b962895806986ca7c88 326 SUPERFAMILY SSF51735 1 313 1.52E-72 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16495 7ed60cc05bc22b962895806986ca7c88 326 Gene3D G3DSA:3.40.50.720 1 170 1.4E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16495 7ed60cc05bc22b962895806986ca7c88 326 Gene3D G3DSA:3.90.25.10 171 314 3.7E-40 T 14-09-2016 AMK01_RS12215 eab0edd8c5ed1bf2a9cefa57ec308330 261 SUPERFAMILY SSF53335 9 260 8.36E-42 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS12215 eab0edd8c5ed1bf2a9cefa57ec308330 261 Pfam PF01209 ubiE/COQ5 methyltransferase family 31 221 1.2E-19 T 14-09-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK01_RS12215 eab0edd8c5ed1bf2a9cefa57ec308330 261 PANTHER PTHR10108 205 222 1.8E-31 T 14-09-2016 AMK01_RS12215 eab0edd8c5ed1bf2a9cefa57ec308330 261 PANTHER PTHR10108 12 188 1.8E-31 T 14-09-2016 AMK01_RS12215 eab0edd8c5ed1bf2a9cefa57ec308330 261 Gene3D G3DSA:3.40.50.150 14 240 6.7E-37 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS00695 a2f269706d893881b83294c3b26a2d7d 131 Gene3D G3DSA:1.10.1220.10 92 123 9.3E-5 T 14-09-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMK01_RS00695 a2f269706d893881b83294c3b26a2d7d 131 SUPERFAMILY SSF143100 1 62 4.45E-11 T 14-09-2016 AMK01_RS00695 a2f269706d893881b83294c3b26a2d7d 131 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 124 2.2E-22 T 14-09-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system AMK01_RS00695 a2f269706d893881b83294c3b26a2d7d 131 SUPERFAMILY SSF47598 91 129 2.8E-5 T 14-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 Gene3D G3DSA:1.10.260.40 8 46 6.2E-14 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 PANTHER PTHR30146 4 338 5.4E-83 T 14-09-2016 AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 PANTHER PTHR30146:SF26 4 338 5.4E-83 T 14-09-2016 AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 Pfam PF13407 Periplasmic binding protein domain 104 309 3.6E-30 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 Gene3D G3DSA:3.40.50.2300 179 314 4.3E-19 T 14-09-2016 AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 Gene3D G3DSA:3.40.50.2300 104 178 4.0E-12 T 14-09-2016 AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 SUPERFAMILY SSF53822 104 319 9.16E-29 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 46 4.7E-11 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 SUPERFAMILY SSF47413 7 47 3.38E-8 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS19120 8631f2528ce74ce33d92f78190467d06 341 SMART SM00354 8 71 2.1E-4 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 Pfam PF00107 Zinc-binding dehydrogenase 178 305 1.8E-24 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 SMART SM00829 16 342 2.0E-4 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 Gene3D G3DSA:3.90.180.10 3 176 1.6E-49 T 14-09-2016 IPR011032 GroES-like AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 139 7.1E-31 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 7 343 6.2E-156 T 14-09-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 14-09-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 5 344 58.542 T 14-09-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 PANTHER PTHR11695 17 344 2.1E-139 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 Gene3D G3DSA:3.40.50.720 177 291 2.0E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 SUPERFAMILY SSF51735 145 309 1.26E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 SUPERFAMILY SSF50129 4 177 2.43E-55 T 14-09-2016 IPR011032 GroES-like AMK01_RS15100 a54104734ac4cdc173ebbef5dbd2dce7 345 PANTHER PTHR11695:SF285 17 344 2.1E-139 T 14-09-2016 AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 SMART SM00448 6 117 0.0059 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 Gene3D G3DSA:3.40.50.2300 3 127 4.7E-15 T 14-09-2016 AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 PANTHER PTHR26402 6 187 2.3E-52 T 14-09-2016 AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 SMART SM01012 133 188 2.8E-25 T 14-09-2016 IPR005561 ANTAR domain GO:0003723 AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 PIRSF PIRSF036382 1 195 6.4E-69 T 14-09-2016 IPR008327 Signal transduction response regulator, antiterminator AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 Pfam PF00072 Response regulator receiver domain 8 111 1.2E-8 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 PANTHER PTHR26402:SF567 6 187 2.3E-52 T 14-09-2016 AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 Gene3D G3DSA:1.10.10.10 136 194 7.5E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 SUPERFAMILY SSF52172 4 188 2.56E-50 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS09020 06ba4fe11d70807f1dcfa35645b3dad3 195 Pfam PF03861 ANTAR domain 136 188 3.5E-21 T 14-09-2016 IPR005561 ANTAR domain GO:0003723 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 SUPERFAMILY SSF52151 26 287 6.54E-28 T 14-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 PANTHER PTHR14226 186 208 1.8E-12 T 14-09-2016 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 PANTHER PTHR14226 231 248 1.8E-12 T 14-09-2016 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 PANTHER PTHR14226 22 170 1.8E-12 T 14-09-2016 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 Pfam PF01734 Patatin-like phospholipase 30 249 2.2E-20 T 14-09-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 PANTHER PTHR14226:SF37 186 208 1.8E-12 T 14-09-2016 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 PANTHER PTHR14226:SF37 231 248 1.8E-12 T 14-09-2016 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 PANTHER PTHR14226:SF37 22 170 1.8E-12 T 14-09-2016 AMK01_RS08835 5c516ffd446b6c2299a452390cf71e3e 421 Gene3D G3DSA:3.40.1090.10 17 80 1.0E-17 T 14-09-2016 AMK01_RS18635 991324b5dee25fe61ee11e03c38ef5b4 464 PANTHER PTHR10160:SF24 1 462 6.5E-254 T 14-09-2016 AMK01_RS18635 991324b5dee25fe61ee11e03c38ef5b4 464 SUPERFAMILY SSF52467 291 462 3.27E-73 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS18635 991324b5dee25fe61ee11e03c38ef5b4 464 PANTHER PTHR10160 1 462 6.5E-254 T 14-09-2016 AMK01_RS18635 991324b5dee25fe61ee11e03c38ef5b4 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 3.3E-189 T 14-09-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMK01_RS18635 991324b5dee25fe61ee11e03c38ef5b4 464 PIRSF PIRSF000204 1 464 4.7E-211 T 14-09-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AMK01_RS18635 991324b5dee25fe61ee11e03c38ef5b4 464 Gene3D G3DSA:3.40.50.1220 288 462 4.0E-84 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 Gene3D G3DSA:3.40.190.10 174 259 6.5E-15 T 14-09-2016 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 PANTHER PTHR30537:SF5 1 295 9.6E-86 T 14-09-2016 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.1E-17 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 Gene3D G3DSA:3.40.190.10 92 173 2.5E-13 T 14-09-2016 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.9E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.9E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.9E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 SUPERFAMILY SSF53850 91 294 2.9E-37 T 14-09-2016 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 PANTHER PTHR30537 1 295 9.6E-86 T 14-09-2016 AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 SUPERFAMILY SSF46785 2 112 4.08E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 Pfam PF03466 LysR substrate binding domain 89 290 1.5E-35 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS16400 0820d412b7d8ce9910f15c3c4a58eb27 299 Gene3D G3DSA:1.10.10.10 4 85 5.8E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 45 62 - T 14-09-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 62 2.6E-12 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 2.6E-12 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 145 2.6E-12 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 2.6E-12 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 Gene3D G3DSA:2.40.100.10 5 152 8.6E-45 T 14-09-2016 IPR029000 Cyclophilin-like domain AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 164 4.6E-45 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 PIRSF PIRSF001467 4 168 1.1E-28 T 14-09-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 SUPERFAMILY SSF50891 10 167 8.77E-46 T 14-09-2016 IPR029000 Cyclophilin-like domain AMK01_RS10855 9c2d8936287be1fa747418f3629500cb 169 PANTHER PTHR11071 12 148 2.9E-39 T 14-09-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 Pfam PF01739 CheR methyltransferase, SAM binding domain 94 291 3.9E-69 T 14-09-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 PIRSF PIRSF000410 11 295 8.1E-107 T 14-09-2016 IPR026024 Chemotaxis protein methyltransferase CheR AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 Gene3D G3DSA:3.40.50.150 93 293 3.6E-66 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 PANTHER PTHR24422 21 293 8.6E-72 T 14-09-2016 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 PRINTS PR00996 Glutamate methyltransferase family signature 127 147 1.8E-48 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 PRINTS PR00996 Glutamate methyltransferase family signature 48 61 1.8E-48 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 PRINTS PR00996 Glutamate methyltransferase family signature 252 275 1.8E-48 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 PRINTS PR00996 Glutamate methyltransferase family signature 87 99 1.8E-48 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 PRINTS PR00996 Glutamate methyltransferase family signature 233 247 1.8E-48 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 PRINTS PR00996 Glutamate methyltransferase family signature 162 178 1.8E-48 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 Gene3D G3DSA:1.10.155.10 19 92 4.8E-19 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 SUPERFAMILY SSF53335 94 279 8.1E-51 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 SUPERFAMILY SSF47757 20 93 1.7E-15 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 SMART SM00138 26 294 2.0E-134 T 14-09-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMK01_RS03400 b4f142de4342eb3801d636cd0bcce3bf 302 Pfam PF03705 CheR methyltransferase, all-alpha domain 28 76 1.3E-11 T 14-09-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMK01_RS10645 ffe818652ab8b39f6cf7865729848493 238 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10645 ffe818652ab8b39f6cf7865729848493 238 Pfam PF00005 ABC transporter 26 174 2.1E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10645 ffe818652ab8b39f6cf7865729848493 238 SMART SM00382 35 235 3.6E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10645 ffe818652ab8b39f6cf7865729848493 238 Gene3D G3DSA:3.40.50.300 5 228 3.0E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10645 ffe818652ab8b39f6cf7865729848493 238 PANTHER PTHR24220:SF578 8 223 1.5E-110 T 14-09-2016 AMK01_RS10645 ffe818652ab8b39f6cf7865729848493 238 PANTHER PTHR24220 8 223 1.5E-110 T 14-09-2016 AMK01_RS10645 ffe818652ab8b39f6cf7865729848493 238 SUPERFAMILY SSF52540 6 227 2.47E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04690 0d818fa972234f5afbcd67d9d1ebff2e 473 PANTHER PTHR28641:SF2 37 452 3.3E-161 T 14-09-2016 AMK01_RS04690 0d818fa972234f5afbcd67d9d1ebff2e 473 PANTHER PTHR28641 37 452 3.3E-161 T 14-09-2016 AMK01_RS04690 0d818fa972234f5afbcd67d9d1ebff2e 473 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 81 415 7.6E-143 T 14-09-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 AMK01_RS20405 d005cc12d0a314e765ce9c22a8d7056f 475 ProSitePatterns PS01219 Ammonium transporters signature. 219 244 - T 14-09-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMK01_RS20405 d005cc12d0a314e765ce9c22a8d7056f 475 PANTHER PTHR11730:SF17 24 472 1.9E-172 T 14-09-2016 AMK01_RS20405 d005cc12d0a314e765ce9c22a8d7056f 475 TIGRFAM TIGR00836 amt: ammonium transporter 49 472 3.9E-129 T 14-09-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMK01_RS20405 d005cc12d0a314e765ce9c22a8d7056f 475 SUPERFAMILY SSF111352 45 453 2.09E-124 T 14-09-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMK01_RS20405 d005cc12d0a314e765ce9c22a8d7056f 475 Pfam PF00909 Ammonium Transporter Family 52 472 7.8E-114 T 14-09-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMK01_RS20405 d005cc12d0a314e765ce9c22a8d7056f 475 Gene3D G3DSA:1.10.3430.10 44 453 1.2E-141 T 14-09-2016 IPR029020 Ammonium/urea transporter AMK01_RS20405 d005cc12d0a314e765ce9c22a8d7056f 475 PANTHER PTHR11730 24 472 1.9E-172 T 14-09-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMK01_RS08520 56c0bf361c0d5dc155fbb665574bc8b0 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.198 T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08520 56c0bf361c0d5dc155fbb665574bc8b0 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08520 56c0bf361c0d5dc155fbb665574bc8b0 132 PANTHER PTHR11758 1 132 7.1E-52 T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08520 56c0bf361c0d5dc155fbb665574bc8b0 132 Pfam PF00410 Ribosomal protein S8 5 132 4.5E-48 T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08520 56c0bf361c0d5dc155fbb665574bc8b0 132 Gene3D G3DSA:3.30.1370.30 2 72 8.0E-25 T 14-09-2016 AMK01_RS08520 56c0bf361c0d5dc155fbb665574bc8b0 132 SUPERFAMILY SSF56047 3 132 3.4E-45 T 14-09-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08520 56c0bf361c0d5dc155fbb665574bc8b0 132 Gene3D G3DSA:3.30.1490.10 76 132 3.3E-28 T 14-09-2016 AMK01_RS16780 3b9cf0620b0023b779314850467de904 370 PANTHER PTHR30294:SF15 1 370 5.3E-94 T 14-09-2016 AMK01_RS16780 3b9cf0620b0023b779314850467de904 370 Pfam PF12698 ABC-2 family transporter protein 36 362 7.4E-38 T 14-09-2016 AMK01_RS16780 3b9cf0620b0023b779314850467de904 370 PANTHER PTHR30294 1 370 5.3E-94 T 14-09-2016 AMK01_RS21165 8f0c4152299074a71221b2c96a6cd795 293 PANTHER PTHR33375 1 293 8.4E-87 T 14-09-2016 AMK01_RS21165 8f0c4152299074a71221b2c96a6cd795 293 SMART SM00470 37 127 2.4E-32 T 14-09-2016 IPR003115 ParB/Sulfiredoxin AMK01_RS21165 8f0c4152299074a71221b2c96a6cd795 293 Pfam PF02195 ParB-like nuclease domain 38 126 1.1E-25 T 14-09-2016 IPR003115 ParB/Sulfiredoxin AMK01_RS21165 8f0c4152299074a71221b2c96a6cd795 293 Gene3D G3DSA:3.90.1530.10 36 133 6.2E-40 T 14-09-2016 AMK01_RS21165 8f0c4152299074a71221b2c96a6cd795 293 SUPERFAMILY SSF110849 37 173 8.89E-34 T 14-09-2016 IPR003115 ParB/Sulfiredoxin AMK01_RS21165 8f0c4152299074a71221b2c96a6cd795 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 36 207 2.6E-57 T 14-09-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AMK01_RS07485 81a200d19128e482a95382ee8405b0d7 349 PANTHER PTHR10799 140 341 3.4E-15 T 14-09-2016 AMK01_RS07485 81a200d19128e482a95382ee8405b0d7 349 PANTHER PTHR10799:SF750 140 341 3.4E-15 T 14-09-2016 AMK01_RS07485 81a200d19128e482a95382ee8405b0d7 349 Pfam PF00990 Diguanylate cyclase, GGDEF domain 187 341 1.8E-30 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS07485 81a200d19128e482a95382ee8405b0d7 349 SMART SM00267 174 347 2.3E-28 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS07485 81a200d19128e482a95382ee8405b0d7 349 SUPERFAMILY SSF55073 191 341 3.61E-31 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS07485 81a200d19128e482a95382ee8405b0d7 349 Gene3D G3DSA:3.30.70.270 188 346 6.2E-36 T 14-09-2016 AMK01_RS07485 81a200d19128e482a95382ee8405b0d7 349 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 182 341 8.1E-29 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 SUPERFAMILY SSF54373 224 332 3.06E-5 T 14-09-2016 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 Pfam PF01266 FAD dependent oxidoreductase 7 371 1.1E-32 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 Gene3D G3DSA:3.50.50.60 155 218 1.8E-22 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 Gene3D G3DSA:3.50.50.60 336 376 1.8E-22 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 Gene3D G3DSA:3.50.50.60 5 65 1.8E-22 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 PANTHER PTHR10961:SF10 8 376 5.9E-117 T 14-09-2016 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 PANTHER PTHR10961 8 376 5.9E-117 T 14-09-2016 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 SUPERFAMILY SSF51905 333 376 5.31E-29 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 SUPERFAMILY SSF51905 5 225 5.31E-29 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 Gene3D G3DSA:3.30.9.10 67 154 2.4E-28 T 14-09-2016 AMK01_RS14670 22ab4a587f7423cfb17b14d5e8478c11 391 Gene3D G3DSA:3.30.9.10 221 332 2.4E-28 T 14-09-2016 AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 SUPERFAMILY SSF52540 5 244 1.11E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 SUPERFAMILY SSF50331 237 356 3.83E-27 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 Pfam PF00005 ABC transporter 21 162 5.0E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 PANTHER PTHR24220:SF572 6 249 3.0E-161 T 14-09-2016 AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 Gene3D G3DSA:2.40.50.140 285 344 1.6E-11 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 Gene3D G3DSA:3.40.50.300 4 235 2.8E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 Gene3D G3DSA:2.40.50.100 240 284 1.3E-15 T 14-09-2016 AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 Gene3D G3DSA:2.40.50.100 345 357 1.3E-15 T 14-09-2016 AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 PANTHER PTHR24220 6 249 3.0E-161 T 14-09-2016 AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 SMART SM00382 29 212 2.6E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS00445 648a3b515236a5b93414230c33c03f43 358 Pfam PF08402 TOBE domain 281 351 6.7E-9 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS08260 7f04d566ce4646bab4665ce90b58a792 150 Pfam PF06170 Protein of unknown function (DUF983) 42 126 1.3E-29 T 14-09-2016 IPR009325 Protein of unknown function DUF983 AMK01_RS20910 212a324ca73e0418d7d3a116d266f5bc 219 SUPERFAMILY SSF52374 26 211 4.38E-43 T 14-09-2016 AMK01_RS20910 212a324ca73e0418d7d3a116d266f5bc 219 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 28 204 20.759 T 14-09-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 AMK01_RS20910 212a324ca73e0418d7d3a116d266f5bc 219 Pfam PF01467 Cytidylyltransferase-like 32 211 3.5E-25 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK01_RS20910 212a324ca73e0418d7d3a116d266f5bc 219 Gene3D G3DSA:3.40.50.620 28 212 3.3E-46 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS20910 212a324ca73e0418d7d3a116d266f5bc 219 PANTHER PTHR39321 193 213 2.8E-30 T 14-09-2016 AMK01_RS20910 212a324ca73e0418d7d3a116d266f5bc 219 PANTHER PTHR39321 25 177 2.8E-30 T 14-09-2016 AMK01_RS20910 212a324ca73e0418d7d3a116d266f5bc 219 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 32 213 8.0E-42 T 14-09-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 AMK01_RS00490 a1654d1ae57be41ab8be9fd4ea08b1ad 208 PANTHER PTHR12124 22 188 9.2E-79 T 14-09-2016 AMK01_RS00490 a1654d1ae57be41ab8be9fd4ea08b1ad 208 PANTHER PTHR12124:SF48 22 188 9.2E-79 T 14-09-2016 AMK01_RS00490 a1654d1ae57be41ab8be9fd4ea08b1ad 208 Pfam PF01612 3'-5' exonuclease 22 172 3.7E-33 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMK01_RS00490 a1654d1ae57be41ab8be9fd4ea08b1ad 208 SMART SM00474 2 173 6.1E-33 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMK01_RS00490 a1654d1ae57be41ab8be9fd4ea08b1ad 208 Gene3D G3DSA:3.30.420.10 17 176 5.8E-22 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS00490 a1654d1ae57be41ab8be9fd4ea08b1ad 208 SUPERFAMILY SSF53098 14 195 1.52E-50 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 Gene3D G3DSA:3.40.1770.10 357 546 1.1E-111 T 14-09-2016 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 Gene3D G3DSA:3.40.1770.10 16 138 1.1E-111 T 14-09-2016 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 PANTHER PTHR12216:SF3 14 540 3.1E-181 T 14-09-2016 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 TIGRFAM TIGR01228 hutU: urocanate hydratase 14 547 3.2E-208 T 14-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 SUPERFAMILY SSF111326 8 549 6.15E-219 T 14-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 PIRSF PIRSF001423 4 553 1.0E-234 T 14-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 Hamap MF_00577 Urocanate hydratase [hutU]. 4 551 44.535 T 14-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 PANTHER PTHR12216 14 540 3.1E-181 T 14-09-2016 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 Pfam PF01175 Urocanase 16 544 1.5E-218 T 14-09-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 AMK01_RS01910 41d7a10b6a9998fceb044a10f121945d 553 Gene3D G3DSA:3.40.50.10730 139 346 3.7E-77 T 14-09-2016 AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.8E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.8E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.8E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.8E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.8E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 7.8E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 258 1.7E-45 T 14-09-2016 AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 Gene3D G3DSA:3.40.50.720 5 258 5.4E-66 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PANTHER PTHR24322 12 140 3.4E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PANTHER PTHR24322 156 192 3.4E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 SUPERFAMILY SSF51735 6 259 1.7E-64 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.2E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.2E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17300 149c6c4f7297c36f005cc16d95b7a8d2 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.2E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 Gene3D G3DSA:3.10.150.10 255 372 8.8E-36 T 14-09-2016 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 5.2E-93 T 14-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 SUPERFAMILY SSF55979 1 119 2.79E-28 T 14-09-2016 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 PANTHER PTHR30478 2 372 3.7E-125 T 14-09-2016 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 SMART SM00480 17 368 7.5E-115 T 14-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 SUPERFAMILY SSF55979 251 372 1.11E-36 T 14-09-2016 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 249 1.8E-30 T 14-09-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 Gene3D G3DSA:3.10.150.10 127 254 3.2E-36 T 14-09-2016 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 Gene3D G3DSA:3.10.150.10 1 121 1.8E-31 T 14-09-2016 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 SUPERFAMILY SSF55979 127 250 2.0E-26 T 14-09-2016 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 PIRSF PIRSF000804 1 372 1.5E-120 T 14-09-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.1E-33 T 14-09-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS01775 bd005445b717a4f80ff01875ebecf3b2 372 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 371 3.7E-32 T 14-09-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 PANTHER PTHR24322:SF317 12 191 3.4E-53 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 SUPERFAMILY SSF51735 6 254 1.61E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 1.2E-84 T 14-09-2016 AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.8E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.8E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.8E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.8E-9 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 PIRSF PIRSF000094 2 260 1.0E-114 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 PANTHER PTHR24322 12 191 3.4E-53 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS00685 7b0f72c3baa8f478fc3b137646ca45a6 268 Gene3D G3DSA:3.40.50.720 7 201 2.4E-66 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 SMART SM00788 3 425 4.8E-284 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 Gene3D G3DSA:3.90.170.10 268 426 1.7E-68 T 14-09-2016 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 135 146 - T 14-09-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 SUPERFAMILY SSF52540 1 426 4.25E-169 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 430 1.9E-159 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 Pfam PF00709 Adenylosuccinate synthetase 4 424 1.0E-169 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-09-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 Gene3D G3DSA:3.40.440.10 198 267 1.5E-68 T 14-09-2016 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 Gene3D G3DSA:3.40.440.10 1 93 1.5E-68 T 14-09-2016 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 PANTHER PTHR11846 3 429 9.1E-225 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 209.658 T 14-09-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK01_RS17195 12814716e4c07c53fb12de86dedaa73e 432 Gene3D G3DSA:1.10.300.10 102 197 2.2E-28 T 14-09-2016 AMK01_RS18860 e3f4885c0727c152fa459e62a24e421c 403 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 99 345 1.1E-17 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS18860 e3f4885c0727c152fa459e62a24e421c 403 SUPERFAMILY SSF111369 240 347 9.55E-11 T 14-09-2016 AMK01_RS18860 e3f4885c0727c152fa459e62a24e421c 403 SUPERFAMILY SSF111369 102 176 1.96E-10 T 14-09-2016 AMK01_RS18860 e3f4885c0727c152fa459e62a24e421c 403 Gene3D G3DSA:2.40.50.100 103 135 5.6E-21 T 14-09-2016 AMK01_RS18860 e3f4885c0727c152fa459e62a24e421c 403 Gene3D G3DSA:2.40.50.100 266 299 5.6E-21 T 14-09-2016 AMK01_RS18860 e3f4885c0727c152fa459e62a24e421c 403 Pfam PF00529 HlyD membrane-fusion protein of T1SS 83 394 1.5E-9 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS18860 e3f4885c0727c152fa459e62a24e421c 403 PANTHER PTHR30386:SF7 67 398 3.3E-93 T 14-09-2016 AMK01_RS18860 e3f4885c0727c152fa459e62a24e421c 403 PANTHER PTHR30386 67 398 3.3E-93 T 14-09-2016 AMK01_RS15015 a1da423e635731a22937beba956fac12 208 PANTHER PTHR34001 1 188 2.4E-23 T 14-09-2016 AMK01_RS15015 a1da423e635731a22937beba956fac12 208 SUPERFAMILY SSF56925 36 208 3.66E-31 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS15015 a1da423e635731a22937beba956fac12 208 Pfam PF13505 Outer membrane protein beta-barrel domain 24 208 3.8E-23 T 14-09-2016 IPR027385 Outer membrane protein beta-barrel AMK01_RS15015 a1da423e635731a22937beba956fac12 208 Gene3D G3DSA:2.40.160.20 36 208 1.3E-34 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS06165 4578cce8f57a2e1904192237c6f77111 227 PANTHER PTHR11260 1 204 2.0E-56 T 14-09-2016 AMK01_RS06165 4578cce8f57a2e1904192237c6f77111 227 SUPERFAMILY SSF47616 85 206 9.05E-23 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS06165 4578cce8f57a2e1904192237c6f77111 227 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 188 8.5E-10 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AMK01_RS06165 4578cce8f57a2e1904192237c6f77111 227 SUPERFAMILY SSF52833 1 79 5.49E-16 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06165 4578cce8f57a2e1904192237c6f77111 227 PANTHER PTHR11260:SF154 1 204 2.0E-56 T 14-09-2016 AMK01_RS06165 4578cce8f57a2e1904192237c6f77111 227 Gene3D G3DSA:1.20.1050.10 90 187 3.0E-30 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS06165 4578cce8f57a2e1904192237c6f77111 227 Gene3D G3DSA:3.40.30.10 1 89 5.1E-23 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06165 4578cce8f57a2e1904192237c6f77111 227 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 76 7.5E-9 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 PRINTS PR00297 10kDa chaperonin signature 84 97 2.1E-34 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 PRINTS PR00297 10kDa chaperonin signature 28 49 2.1E-34 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 PRINTS PR00297 10kDa chaperonin signature 63 75 2.1E-34 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 PRINTS PR00297 10kDa chaperonin signature 6 21 2.1E-34 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 PANTHER PTHR10772 4 97 9.7E-48 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 Gene3D G3DSA:2.30.33.40 5 97 4.7E-39 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 6 30 - T 14-09-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 Hamap MF_00580 10 kDa chaperonin [groS]. 5 98 27.519 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 SUPERFAMILY SSF50129 4 97 4.4E-36 T 14-09-2016 IPR011032 GroES-like AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 SMART SM00883 5 97 1.1E-61 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS04235 5d43f30e18eecd573e6ab7facd1af113 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 97 1.6E-36 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 Gene3D G3DSA:3.90.25.10 260 331 8.0E-22 T 14-09-2016 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 Gene3D G3DSA:3.90.25.10 199 218 8.0E-22 T 14-09-2016 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.8E-20 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.8E-20 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.8E-20 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.8E-20 T 14-09-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 PANTHER PTHR10366:SF77 250 335 8.9E-139 T 14-09-2016 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 PANTHER PTHR10366:SF77 2 231 8.9E-139 T 14-09-2016 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 Gene3D G3DSA:3.40.50.720 1 198 1.3E-57 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 SUPERFAMILY SSF51735 1 332 6.2E-86 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 PANTHER PTHR10366 250 335 8.9E-139 T 14-09-2016 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 PANTHER PTHR10366 2 231 8.9E-139 T 14-09-2016 AMK01_RS16750 c1a8a3cf563951749ccae506b4feab43 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 231 2.9E-54 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS11270 0a66d3e5cece8c26a31c2e03778b4a70 134 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 59 110 1.0E-21 T 14-09-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK01_RS11270 0a66d3e5cece8c26a31c2e03778b4a70 134 PANTHER PTHR33383 49 126 2.2E-26 T 14-09-2016 AMK01_RS11270 0a66d3e5cece8c26a31c2e03778b4a70 134 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 50 114 2.5E-19 T 14-09-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK01_RS11270 0a66d3e5cece8c26a31c2e03778b4a70 134 Pfam PF01809 Haemolytic domain 48 110 2.6E-21 T 14-09-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK01_RS11270 0a66d3e5cece8c26a31c2e03778b4a70 134 SMART SM01234 43 110 2.5E-28 T 14-09-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK01_RS11270 0a66d3e5cece8c26a31c2e03778b4a70 134 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 43 111 19.373 T 14-09-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 PANTHER PTHR33164 18 159 3.2E-13 T 14-09-2016 AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 SMART SM00347 46 146 3.1E-21 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 14-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 SUPERFAMILY SSF46785 18 159 8.44E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 Pfam PF12802 MarR family 51 110 2.4E-15 T 14-09-2016 AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 5.1E-6 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 5.1E-6 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 5.1E-6 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS15345 826b7e6ce28e2a1ca8c7bb3080193fa0 163 Gene3D G3DSA:1.10.10.10 18 159 1.3E-33 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05400 1f073dc2a98afaefe7ca463f300e1412 116 Gene3D G3DSA:1.10.8.290 1 116 7.3E-60 T 14-09-2016 IPR023204 SP1917 domain AMK01_RS05400 1f073dc2a98afaefe7ca463f300e1412 116 PIRSF PIRSF033199 1 116 3.4E-60 T 14-09-2016 IPR014580 Uncharacterised conserved protein UCP033199 AMK01_RS05400 1f073dc2a98afaefe7ca463f300e1412 116 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 6 115 1.6E-52 T 14-09-2016 IPR014580 Uncharacterised conserved protein UCP033199 AMK01_RS10565 c24aadfa102298d664b3646186470cf2 531 PANTHER PTHR30290 11 516 1.8E-100 T 14-09-2016 AMK01_RS10565 c24aadfa102298d664b3646186470cf2 531 SUPERFAMILY SSF53850 27 526 2.72E-106 T 14-09-2016 AMK01_RS10565 c24aadfa102298d664b3646186470cf2 531 Gene3D G3DSA:3.40.190.10 142 294 2.3E-38 T 14-09-2016 AMK01_RS10565 c24aadfa102298d664b3646186470cf2 531 PIRSF PIRSF002741 12 531 1.2E-77 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK01_RS10565 c24aadfa102298d664b3646186470cf2 531 Gene3D G3DSA:3.10.105.10 295 493 1.5E-41 T 14-09-2016 AMK01_RS10565 c24aadfa102298d664b3646186470cf2 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 438 1.5E-77 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS16110 9b3a36278c4f5621f119166609dae8db 403 PANTHER PTHR32196 19 189 6.6E-103 T 14-09-2016 AMK01_RS16110 9b3a36278c4f5621f119166609dae8db 403 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 393 3.7E-47 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS16110 9b3a36278c4f5621f119166609dae8db 403 PANTHER PTHR32196:SF21 249 402 6.6E-103 T 14-09-2016 AMK01_RS16110 9b3a36278c4f5621f119166609dae8db 403 PANTHER PTHR32196 249 402 6.6E-103 T 14-09-2016 AMK01_RS16110 9b3a36278c4f5621f119166609dae8db 403 PANTHER PTHR32196:SF21 19 189 6.6E-103 T 14-09-2016 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 166 181 - T 14-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 SUPERFAMILY SSF142019 3 238 3.79E-84 T 14-09-2016 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 SMART SM00928 330 375 4.5E-25 T 14-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 PANTHER PTHR11780:SF10 2 419 2.9E-261 T 14-09-2016 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 SUPERFAMILY SSF142984 240 325 1.31E-23 T 14-09-2016 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 343 354 - T 14-09-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 PANTHER PTHR11780 2 419 2.9E-261 T 14-09-2016 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 216 1.1E-49 T 14-09-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 414 3.2E-30 T 14-09-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 416 1.3E-197 T 14-09-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 Pfam PF10531 SLBB domain 242 292 4.5E-8 T 14-09-2016 IPR019554 Soluble ligand binding domain AMK01_RS08120 de59c0d959374ba2eed9b1b8aae3424b 434 SUPERFAMILY SSF140490 326 419 1.83E-35 T 14-09-2016 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 Pfam PF00083 Sugar (and other) transporter 502 625 9.1E-9 T 14-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 Pfam PF00083 Sugar (and other) transporter 24 239 1.6E-27 T 14-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 Gene3D G3DSA:1.20.1250.20 525 622 2.4E-23 T 14-09-2016 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 Gene3D G3DSA:1.20.1250.20 251 339 2.4E-23 T 14-09-2016 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 Gene3D G3DSA:1.20.1250.20 20 227 2.5E-20 T 14-09-2016 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 PANTHER PTHR23508:SF7 15 341 6.2E-219 T 14-09-2016 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 PANTHER PTHR23508:SF7 528 626 6.2E-219 T 14-09-2016 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 SUPERFAMILY SSF103473 519 624 4.32E-11 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 PANTHER PTHR23508 15 341 6.2E-219 T 14-09-2016 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 PANTHER PTHR23508 528 626 6.2E-219 T 14-09-2016 AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 SUPERFAMILY SSF103473 15 334 9.94E-49 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS21035 8b0c14386aaab9b8ca8802392f1ea7b5 628 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 14-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMK01_RS19025 d1f1ac5ca62e63e384d195dda03aa6a1 436 Gene3D G3DSA:3.40.190.10 138 349 5.0E-55 T 14-09-2016 AMK01_RS19025 d1f1ac5ca62e63e384d195dda03aa6a1 436 SUPERFAMILY SSF53850 24 408 1.7E-85 T 14-09-2016 AMK01_RS19025 d1f1ac5ca62e63e384d195dda03aa6a1 436 Pfam PF01547 Bacterial extracellular solute-binding protein 38 326 7.4E-58 T 14-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK01_RS19025 d1f1ac5ca62e63e384d195dda03aa6a1 436 PANTHER PTHR30061 1 436 1.5E-147 T 14-09-2016 AMK01_RS19025 d1f1ac5ca62e63e384d195dda03aa6a1 436 PANTHER PTHR30061:SF3 1 436 1.5E-147 T 14-09-2016 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-09-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 PIRSF PIRSF000103 1 289 2.7E-73 T 14-09-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 SUPERFAMILY SSF48179 165 288 4.08E-41 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 Gene3D G3DSA:1.10.1040.10 167 288 1.2E-41 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 PANTHER PTHR22981 1 289 1.1E-160 T 14-09-2016 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 285 8.0E-36 T 14-09-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 5.5E-49 T 14-09-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 PANTHER PTHR22981:SF49 1 289 1.1E-160 T 14-09-2016 AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 Gene3D G3DSA:3.40.50.720 1 165 2.2E-53 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12435 ef741d1430c73d203e58ef9218bac911 289 SUPERFAMILY SSF51735 2 165 5.46E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 Pfam PF14579 Helix-hairpin-helix motif 767 859 8.4E-21 T 14-09-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 SMART SM00481 4 71 8.1E-10 T 14-09-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1087 13.694 T 14-09-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 Gene3D G3DSA:3.20.20.140 5 237 1.3E-9 T 14-09-2016 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 PANTHER PTHR32294 1 1062 0.0 T 14-09-2016 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 PANTHER PTHR32294:SF4 1 1062 0.0 T 14-09-2016 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 SUPERFAMILY SSF89550 11 81 3.34E-6 T 14-09-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 Pfam PF02811 PHP domain 5 119 2.3E-8 T 14-09-2016 IPR004013 PHP domain GO:0003824 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 982 9.7E-163 T 14-09-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS10110 785fdbae313e1fc90ef14efebcc531d7 1087 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 272 694 7.0E-147 T 14-09-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 SUPERFAMILY SSF48179 638 725 1.28E-20 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 PANTHER PTHR23309 7 730 2.3E-297 T 14-09-2016 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 SUPERFAMILY SSF52096 1 318 2.8E-67 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 PANTHER PTHR23309:SF6 7 730 2.3E-297 T 14-09-2016 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 510 607 1.2E-22 T 14-09-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 Gene3D G3DSA:3.40.50.720 324 511 6.7E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 Gene3D G3DSA:3.90.226.10 2 214 1.7E-62 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 Gene3D G3DSA:3.90.226.10 247 305 1.7E-62 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 SUPERFAMILY SSF51735 326 508 7.52E-53 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 SUPERFAMILY SSF48179 509 620 3.49E-23 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 329 508 4.3E-56 T 14-09-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 214 1.9E-28 T 14-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 Gene3D G3DSA:1.10.1040.10 643 725 1.2E-14 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS02965 a475d379da2de3666998b6023849ec78 738 Gene3D G3DSA:1.10.1040.10 512 608 4.4E-20 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 531 717 1.5E-40 T 14-09-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 TIGRFAM TIGR01815 TrpE-clade3: anthranilate synthase 13 729 0.0 T 14-09-2016 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00097 Anthranilate synthase component II signature 693 706 2.2E-23 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00097 Anthranilate synthase component II signature 627 635 2.2E-23 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00097 Anthranilate synthase component II signature 531 545 2.2E-23 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00097 Anthranilate synthase component II signature 602 613 2.2E-23 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00097 Anthranilate synthase component II signature 648 660 2.2E-23 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00097 Anthranilate synthase component II signature 575 584 2.2E-23 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PANTHER PTHR11236 1 587 1.0E-240 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 SUPERFAMILY SSF52317 528 719 1.48E-47 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 Pfam PF00425 chorismate binding enzyme 247 499 3.1E-66 T 14-09-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 Pfam PF04715 Anthranilate synthase component I, N terminal region 39 206 1.6E-7 T 14-09-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 Gene3D G3DSA:3.60.120.10 31 509 1.1E-118 T 14-09-2016 IPR005801 ADC synthase GO:0009058 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 Gene3D G3DSA:3.40.50.880 530 718 3.7E-49 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PIRSF PIRSF036934 1 729 0.0 T 14-09-2016 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 Pfam PF00117 Glutamine amidotransferase class-I 533 707 3.6E-44 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PANTHER PTHR11236:SF22 1 587 1.0E-240 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 SUPERFAMILY SSF56322 24 507 5.89E-123 T 14-09-2016 IPR005801 ADC synthase GO:0009058 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 572 586 2.1E-6 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 602 618 2.1E-6 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00096 Glutamine amidotransferase superfamily signature 602 613 6.0E-11 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00096 Glutamine amidotransferase superfamily signature 693 706 6.0E-11 T 14-09-2016 AMK01_RS15660 c2e400cb701a63dd6e3788a9a1c6c261 729 PRINTS PR00096 Glutamine amidotransferase superfamily signature 575 584 6.0E-11 T 14-09-2016 AMK01_RS02310 9fae3f2281e9e2132647dbcd7aed0a7e 238 PANTHER PTHR12725:SF79 1 195 7.1E-22 T 14-09-2016 AMK01_RS02310 9fae3f2281e9e2132647dbcd7aed0a7e 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 195 2.4E-8 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS02310 9fae3f2281e9e2132647dbcd7aed0a7e 238 Gene3D G3DSA:3.40.50.1000 19 211 4.5E-22 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS02310 9fae3f2281e9e2132647dbcd7aed0a7e 238 SUPERFAMILY SSF56784 19 203 7.82E-27 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS02310 9fae3f2281e9e2132647dbcd7aed0a7e 238 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 18 195 7.4E-68 T 14-09-2016 IPR010237 Pyrimidine 5-nucleotidase AMK01_RS02310 9fae3f2281e9e2132647dbcd7aed0a7e 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 20 195 3.6E-9 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS02310 9fae3f2281e9e2132647dbcd7aed0a7e 238 PANTHER PTHR12725 1 195 7.1E-22 T 14-09-2016 AMK01_RS02170 dbddde55556f2309f8147b6f19767997 364 PANTHER PTHR11061:SF33 344 356 1.6E-66 T 14-09-2016 AMK01_RS02170 dbddde55556f2309f8147b6f19767997 364 SUPERFAMILY SSF53335 69 335 3.97E-55 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02170 dbddde55556f2309f8147b6f19767997 364 Gene3D G3DSA:3.40.50.150 89 362 7.9E-71 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02170 dbddde55556f2309f8147b6f19767997 364 PANTHER PTHR11061:SF33 76 279 1.6E-66 T 14-09-2016 AMK01_RS02170 dbddde55556f2309f8147b6f19767997 364 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 162 273 9.0E-10 T 14-09-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AMK01_RS02170 dbddde55556f2309f8147b6f19767997 364 PANTHER PTHR11061 76 279 1.6E-66 T 14-09-2016 AMK01_RS02170 dbddde55556f2309f8147b6f19767997 364 PANTHER PTHR11061 344 356 1.6E-66 T 14-09-2016 AMK01_RS19640 1e62c5ea190ed1365d9e304894f0af11 633 Pfam PF06213 Cobalamin biosynthesis protein CobT 17 287 4.5E-93 T 14-09-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK01_RS19640 1e62c5ea190ed1365d9e304894f0af11 633 PIRSF PIRSF031715 5 626 1.1E-288 T 14-09-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK01_RS19640 1e62c5ea190ed1365d9e304894f0af11 633 Gene3D G3DSA:3.40.50.410 415 590 2.9E-6 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS19640 1e62c5ea190ed1365d9e304894f0af11 633 SMART SM00327 412 621 1.9E-10 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS19640 1e62c5ea190ed1365d9e304894f0af11 633 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 19 619 0.0 T 14-09-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK01_RS19640 1e62c5ea190ed1365d9e304894f0af11 633 SUPERFAMILY SSF53300 415 609 6.83E-16 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS19640 1e62c5ea190ed1365d9e304894f0af11 633 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 401 618 2.0E-112 T 14-09-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK01_RS07160 32c71e1c04dc36a13d6e58821f37c82d 190 Pfam PF13023 HD domain 31 99 5.3E-5 T 14-09-2016 IPR006674 HD domain AMK01_RS07160 32c71e1c04dc36a13d6e58821f37c82d 190 SUPERFAMILY SSF109604 1 181 9.42E-56 T 14-09-2016 AMK01_RS07160 32c71e1c04dc36a13d6e58821f37c82d 190 Gene3D G3DSA:1.10.3210.10 1 185 2.0E-64 T 14-09-2016 IPR006674 HD domain AMK01_RS20485 7d6a8c787dc418a6715c01568c7b9ac2 341 PANTHER PTHR32196:SF21 15 340 4.3E-90 T 14-09-2016 AMK01_RS20485 7d6a8c787dc418a6715c01568c7b9ac2 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 328 2.8E-48 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS20485 7d6a8c787dc418a6715c01568c7b9ac2 341 PANTHER PTHR32196 15 340 4.3E-90 T 14-09-2016 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 PANTHER PTHR30290 395 605 2.3E-168 T 14-09-2016 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 106 522 3.0E-76 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 PIRSF PIRSF002741 3 609 4.3E-93 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 Gene3D G3DSA:3.90.76.10 70 222 1.2E-32 T 14-09-2016 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 PANTHER PTHR30290:SF2 395 605 2.3E-168 T 14-09-2016 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 SUPERFAMILY SSF53850 55 605 2.53E-118 T 14-09-2016 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 Gene3D G3DSA:3.10.105.10 340 576 4.8E-44 T 14-09-2016 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 PANTHER PTHR30290 1 370 2.3E-168 T 14-09-2016 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 Gene3D G3DSA:3.40.190.10 223 339 9.9E-21 T 14-09-2016 AMK01_RS01030 ddf20bca1a905d31feb312c1e87ac741 610 PANTHER PTHR30290:SF2 1 370 2.3E-168 T 14-09-2016 AMK01_RS11250 11110f42439962eb5ff6b71f08ec68ee 194 SUPERFAMILY SSF55469 5 190 6.81E-34 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AMK01_RS11250 11110f42439962eb5ff6b71f08ec68ee 194 PANTHER PTHR23026 8 188 4.1E-51 T 14-09-2016 AMK01_RS11250 11110f42439962eb5ff6b71f08ec68ee 194 Pfam PF00881 Nitroreductase family 13 169 5.1E-23 T 14-09-2016 IPR029479 Nitroreductase AMK01_RS11250 11110f42439962eb5ff6b71f08ec68ee 194 PIRSF PIRSF000232 2 193 1.4E-55 T 14-09-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- AMK01_RS11250 11110f42439962eb5ff6b71f08ec68ee 194 Gene3D G3DSA:3.40.109.10 6 190 5.6E-38 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AMK01_RS11250 11110f42439962eb5ff6b71f08ec68ee 194 PANTHER PTHR23026:SF107 8 188 4.1E-51 T 14-09-2016 AMK01_RS19605 05228e1022355784fc3b5d0d56ec50e5 140 PANTHER PTHR33387:SF2 6 136 8.5E-47 T 14-09-2016 AMK01_RS19605 05228e1022355784fc3b5d0d56ec50e5 140 Pfam PF06172 Cupin superfamily (DUF985) 6 131 2.0E-48 T 14-09-2016 IPR009327 Cupin domain of unknown function DUF985 AMK01_RS19605 05228e1022355784fc3b5d0d56ec50e5 140 PANTHER PTHR33387 6 136 8.5E-47 T 14-09-2016 AMK01_RS19605 05228e1022355784fc3b5d0d56ec50e5 140 Gene3D G3DSA:2.60.120.10 2 136 8.6E-53 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS19605 05228e1022355784fc3b5d0d56ec50e5 140 SUPERFAMILY SSF51182 2 137 2.15E-55 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 Gene3D G3DSA:1.10.340.30 39 134 1.0E-41 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 SUPERFAMILY SSF55811 230 357 5.14E-25 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 Pfam PF14815 NUDIX domain 245 355 9.8E-22 T 14-09-2016 IPR029119 MutY, C-terminal AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 SMART SM00478 51 200 3.5E-45 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 14-09-2016 IPR004035 Endonuclease III, iron-sulphur binding site AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 Gene3D G3DSA:1.10.1670.10 135 233 1.1E-37 T 14-09-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 Pfam PF00633 Helix-hairpin-helix motif 111 139 1.3E-7 T 14-09-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 ProSitePatterns PS01155 Endonuclease III family signature. 114 143 - T 14-09-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 12 277 2.2E-95 T 14-09-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 PANTHER PTHR10359 14 318 1.5E-86 T 14-09-2016 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 Gene3D G3DSA:3.90.79.10 241 357 2.0E-15 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 166 2.6E-17 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK01_RS05055 21723f8f66e9e873b63996a9aafc45ea 367 SUPERFAMILY SSF48150 12 232 5.02E-70 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 Gene3D G3DSA:3.40.50.720 1 150 2.2E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 132 2.3E-24 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 SUPERFAMILY SSF51735 4 160 4.13E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 Gene3D G3DSA:3.30.360.10 151 290 2.5E-33 T 14-09-2016 AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 Gene3D G3DSA:3.30.360.10 338 387 2.5E-33 T 14-09-2016 AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 211 3.5E-8 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 SUPERFAMILY SSF55347 137 327 1.64E-29 T 14-09-2016 AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 PANTHER PTHR22604 239 388 1.7E-72 T 14-09-2016 AMK01_RS08710 198c52daac0d1b28e1a3c44f34640633 389 PANTHER PTHR22604 1 218 1.7E-72 T 14-09-2016 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 SUPERFAMILY SSF49785 9 189 3.4E-47 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 SUPERFAMILY SSF49303 735 815 1.29E-12 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 PANTHER PTHR10066 10 134 3.5E-218 T 14-09-2016 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 PANTHER PTHR10066:SF12 10 134 3.5E-218 T 14-09-2016 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 Gene3D G3DSA:3.20.20.80 572 639 2.4E-71 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 Gene3D G3DSA:3.20.20.80 291 534 2.4E-71 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 Gene3D G3DSA:2.60.40.320 194 290 1.8E-10 T 14-09-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 SUPERFAMILY SSF51445 288 636 7.98E-107 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 PANTHER PTHR10066 157 801 3.5E-218 T 14-09-2016 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 PANTHER PTHR10066:SF12 157 801 3.5E-218 T 14-09-2016 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 Pfam PF00703 Glycosyl hydrolases family 2 196 291 2.3E-7 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 Gene3D G3DSA:2.60.120.260 7 190 1.2E-15 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS12565 e1fd2f894563bbef85d9ea5bcb6cd512 819 SUPERFAMILY SSF49303 194 291 2.01E-16 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS19325 cff1cce375b64744d10a955cf0bec084 248 PANTHER PTHR10108 5 246 1.7E-83 T 14-09-2016 AMK01_RS19325 cff1cce375b64744d10a955cf0bec084 248 SUPERFAMILY SSF53335 15 245 9.09E-44 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS19325 cff1cce375b64744d10a955cf0bec084 248 Gene3D G3DSA:3.40.50.150 35 235 8.9E-43 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS19325 cff1cce375b64744d10a955cf0bec084 248 PANTHER PTHR10108:SF902 5 246 1.7E-83 T 14-09-2016 AMK01_RS19325 cff1cce375b64744d10a955cf0bec084 248 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 247 39.787 T 14-09-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 AMK01_RS19325 cff1cce375b64744d10a955cf0bec084 248 Pfam PF13489 Methyltransferase domain 58 216 4.7E-22 T 14-09-2016 AMK01_RS19325 cff1cce375b64744d10a955cf0bec084 248 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 13 241 2.7E-89 T 14-09-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 Pfam PF00480 ROK family 87 377 1.4E-47 T 14-09-2016 IPR000600 ROK family AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 Gene3D G3DSA:1.10.10.10 14 80 8.2E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 SUPERFAMILY SSF53067 85 382 1.71E-50 T 14-09-2016 AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 PANTHER PTHR18964:SF108 62 384 2.8E-56 T 14-09-2016 AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 Gene3D G3DSA:3.30.420.40 226 362 1.6E-32 T 14-09-2016 AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 Pfam PF13412 Winged helix-turn-helix DNA-binding 22 61 2.2E-7 T 14-09-2016 AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 Gene3D G3DSA:3.30.420.40 81 225 3.7E-44 T 14-09-2016 AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 PANTHER PTHR18964 62 384 2.8E-56 T 14-09-2016 AMK01_RS07850 158cac5a167856dac55ef990e6f856f6 393 SUPERFAMILY SSF46785 13 76 2.79E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20555 31f9c8d8c5a34844a5efeee8b0d6c37f 190 Pfam PF03358 NADPH-dependent FMN reductase 5 139 7.5E-29 T 14-09-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMK01_RS20555 31f9c8d8c5a34844a5efeee8b0d6c37f 190 PANTHER PTHR30543 1 185 1.7E-35 T 14-09-2016 AMK01_RS20555 31f9c8d8c5a34844a5efeee8b0d6c37f 190 PANTHER PTHR30543:SF1 1 185 1.7E-35 T 14-09-2016 AMK01_RS20555 31f9c8d8c5a34844a5efeee8b0d6c37f 190 SUPERFAMILY SSF52218 5 175 4.19E-31 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS20555 31f9c8d8c5a34844a5efeee8b0d6c37f 190 Gene3D G3DSA:3.40.50.360 5 181 2.4E-39 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 SUPERFAMILY SSF46689 3 79 6.8E-20 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 Gene3D G3DSA:1.10.10.60 42 76 1.5E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 PANTHER PTHR30055:SF47 6 183 3.6E-23 T 14-09-2016 AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.9E-11 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.9E-11 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 SUPERFAMILY SSF48498 78 183 2.45E-15 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 PANTHER PTHR30055 6 183 3.6E-23 T 14-09-2016 AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 3.0E-17 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02925 fa9958144382383be790ec6569b13bc5 202 Gene3D G3DSA:1.10.10.60 4 41 2.9E-19 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS11290 2eaa6ffc6a3f8664aa1c9986475bdbe8 320 SUPERFAMILY SSF52151 34 316 1.18E-53 T 14-09-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK01_RS11290 2eaa6ffc6a3f8664aa1c9986475bdbe8 320 PANTHER PTHR14226:SF24 37 312 1.8E-87 T 14-09-2016 AMK01_RS11290 2eaa6ffc6a3f8664aa1c9986475bdbe8 320 PANTHER PTHR14226 37 312 1.8E-87 T 14-09-2016 AMK01_RS11290 2eaa6ffc6a3f8664aa1c9986475bdbe8 320 Pfam PF01734 Patatin-like phospholipase 40 197 9.9E-25 T 14-09-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AMK01_RS11290 2eaa6ffc6a3f8664aa1c9986475bdbe8 320 Gene3D G3DSA:3.40.1090.10 35 201 1.6E-10 T 14-09-2016 AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 Gene3D G3DSA:3.40.50.720 2 250 3.6E-65 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 SUPERFAMILY SSF51735 1 249 6.95E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.3E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.3E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.3E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.3E-23 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PANTHER PTHR24322 6 130 7.6E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PANTHER PTHR24322 146 178 7.6E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 Pfam PF00106 short chain dehydrogenase 2 186 1.8E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PANTHER PTHR24322:SF397 6 130 7.6E-56 T 14-09-2016 AMK01_RS08630 b73606f9503bcde2225b4d2f43034713 283 PANTHER PTHR24322:SF397 146 178 7.6E-56 T 14-09-2016 AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 Gene3D G3DSA:3.40.50.880 34 299 6.5E-116 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 PIRSF PIRSF000450 1 307 1.5E-147 T 14-09-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 PANTHER PTHR20919:SF0 2 307 2.2E-117 T 14-09-2016 AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 7.6E-117 T 14-09-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 PANTHER PTHR20919 2 307 2.2E-117 T 14-09-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 292 1.0E-136 T 14-09-2016 AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 Pfam PF04204 Homoserine O-succinyltransferase 2 298 9.7E-133 T 14-09-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 300 51.503 T 14-09-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK01_RS20705 263afe97d3bd424839785ce92b72060e 307 SUPERFAMILY SSF52317 17 296 1.97E-98 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS14865 004828f0776a8d6a284463cc868dc541 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 273 1.5E-14 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14865 004828f0776a8d6a284463cc868dc541 279 PANTHER PTHR32243 1 279 1.4E-69 T 14-09-2016 AMK01_RS14865 004828f0776a8d6a284463cc868dc541 279 SUPERFAMILY SSF161098 7 279 1.59E-59 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14865 004828f0776a8d6a284463cc868dc541 279 PANTHER PTHR32243:SF31 1 279 1.4E-69 T 14-09-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK01_RS14865 004828f0776a8d6a284463cc868dc541 279 Gene3D G3DSA:1.10.3720.10 3 267 1.1E-52 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 SUPERFAMILY SSF55073 2 172 1.37E-44 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 SMART SM00028 423 456 59.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 SMART SM00028 526 559 0.025 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 SMART SM00028 492 525 63.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 SMART SM00028 457 490 1.2 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 Pfam PF13432 Tetratricopeptide repeat 498 558 1.1E-5 T 14-09-2016 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 SUPERFAMILY SSF48452 402 560 3.79E-29 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 Gene3D G3DSA:3.30.70.1230 4 172 8.7E-31 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 8 169 4.5E-14 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 PANTHER PTHR23083 362 561 3.9E-29 T 14-09-2016 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 Gene3D G3DSA:1.25.40.10 359 561 8.2E-34 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS15135 7d27bfa9903da973b1dc405391ee083a 589 Gene3D G3DSA:3.40.50.10070 197 297 4.3E-4 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 SUPERFAMILY SSF46894 170 240 9.52E-15 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 221 7.1E-6 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 193 7.1E-6 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 209 7.1E-6 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 SMART SM00421 176 233 4.2E-13 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 SUPERFAMILY SSF75516 13 166 1.28E-32 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 Pfam PF03472 Autoinducer binding domain 26 164 3.8E-33 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 Gene3D G3DSA:1.10.10.10 181 239 1.6E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 231 7.7E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS14975 2134323a3f1a1213868446a60a967ab4 241 Gene3D G3DSA:3.30.450.80 10 180 2.4E-36 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 Gene3D G3DSA:3.40.50.300 80 104 3.4E-14 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 Gene3D G3DSA:3.40.50.300 154 237 3.4E-14 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 81 258 35.161 T 14-09-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 Pfam PF13238 AAA domain 85 218 6.4E-7 T 14-09-2016 AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 PANTHER PTHR23117:SF8 82 257 4.5E-40 T 14-09-2016 AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 PANTHER PTHR23117 82 257 4.5E-40 T 14-09-2016 AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 SUPERFAMILY SSF52540 25 107 6.75E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 82 258 4.3E-67 T 14-09-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 SUPERFAMILY SSF52540 79 262 1.86E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS25540 d6b4b4d71d926e6b0f27c6a81265de1a 265 SMART SM00072 81 261 2.6E-4 T 14-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 Pfam PF00106 short chain dehydrogenase 9 190 1.1E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PANTHER PTHR24322 151 182 5.4E-51 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PANTHER PTHR24322 10 135 5.4E-51 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.6E-26 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.6E-26 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.6E-26 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.6E-26 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.6E-26 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 Gene3D G3DSA:3.40.50.720 7 248 4.0E-66 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 SUPERFAMILY SSF51735 7 249 8.11E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.1E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.1E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01625 85ab05d3277d18c99498c4758d54b487 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.1E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 10 55 14.267 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 14-09-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 7.8E-6 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 7.8E-6 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 7.8E-6 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 PANTHER PTHR21109 2 68 1.2E-29 T 14-09-2016 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 41 6.0E-10 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 PANTHER PTHR21109:SF3 2 68 1.2E-29 T 14-09-2016 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 Pfam PF01165 Ribosomal protein S21 2 55 1.2E-20 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS18615 fee025322ef8aa150f8f91daf862bc61 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 8.6E-23 T 14-09-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 AMK01_RS11855 410f358670ed091571bf1afc555c41c4 276 SUPERFAMILY SSF75217 15 171 5.56E-33 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AMK01_RS11855 410f358670ed091571bf1afc555c41c4 276 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 16 249 1.4E-54 T 14-09-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMK01_RS11855 410f358670ed091571bf1afc555c41c4 276 PIRSF PIRSF004808 9 257 4.7E-85 T 14-09-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMK01_RS11855 410f358670ed091571bf1afc555c41c4 276 Pfam PF00588 SpoU rRNA Methylase family 16 166 4.9E-33 T 14-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK01_RS11855 410f358670ed091571bf1afc555c41c4 276 Gene3D G3DSA:3.40.1280.10 14 171 1.2E-32 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK01_RS11855 410f358670ed091571bf1afc555c41c4 276 PANTHER PTHR12029 7 192 1.1E-27 T 14-09-2016 AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 TIGRFAM TIGR03822 AblA_like_2: lysine-2,3-aminomutase-related protein 8 326 9.8E-178 T 14-09-2016 IPR022447 Lysine-2,3-aminomutase-related AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 PIRSF PIRSF004911 1 350 2.0E-121 T 14-09-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 Gene3D G3DSA:3.20.20.70 87 303 2.9E-19 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 PANTHER PTHR30538:SF1 7 318 7.6E-109 T 14-09-2016 AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 SUPERFAMILY SSF102114 85 319 4.05E-31 T 14-09-2016 AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 Pfam PF13353 4Fe-4S single cluster domain 101 168 1.2E-5 T 14-09-2016 AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 Pfam PF04055 Radical SAM superfamily 102 250 1.5E-8 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 TIGRFAM TIGR00238 TIGR00238: KamA family protein 8 314 1.0E-78 T 14-09-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMK01_RS20750 c4b6c2f47202d6e2e82940eddfa9224c 352 PANTHER PTHR30538 7 318 7.6E-109 T 14-09-2016 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 Pfam PF00515 Tetratricopeptide repeat 173 204 1.6E-9 T 14-09-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 Pfam PF00515 Tetratricopeptide repeat 105 137 5.4E-9 T 14-09-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 SMART SM00028 240 273 2.2E-4 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 SMART SM00028 138 171 0.61 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 SMART SM00028 172 205 1.5E-7 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 SMART SM00028 206 239 0.045 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 SMART SM00028 70 103 7.5E-5 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 SMART SM00028 104 137 2.9E-7 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 PANTHER PTHR23083 56 283 2.4E-59 T 14-09-2016 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 Gene3D G3DSA:1.25.40.10 210 283 1.1E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 Gene3D G3DSA:1.25.40.10 141 209 2.5E-22 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 Pfam PF13181 Tetratricopeptide repeat 71 101 0.025 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 Pfam PF13181 Tetratricopeptide repeat 240 272 7.6E-5 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 Pfam PF13181 Tetratricopeptide repeat 209 237 0.068 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 Gene3D G3DSA:1.25.40.10 53 140 5.0E-26 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18620 4f84c20ed319d0260e139f3fd87380d3 288 SUPERFAMILY SSF48439 46 271 4.71E-46 T 14-09-2016 AMK01_RS06935 b2ad36ae3a79694cfbeb68a3d70c82f6 288 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 79 248 7.3E-57 T 14-09-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 AMK01_RS06935 b2ad36ae3a79694cfbeb68a3d70c82f6 288 PANTHER PTHR34136 17 277 9.7E-80 T 14-09-2016 AMK01_RS06935 b2ad36ae3a79694cfbeb68a3d70c82f6 288 PANTHER PTHR34136:SF2 17 277 9.7E-80 T 14-09-2016 AMK01_RS06935 b2ad36ae3a79694cfbeb68a3d70c82f6 288 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 75 250 1.9E-49 T 14-09-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 8.1E-112 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 PANTHER PTHR30531 1 359 5.1E-108 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 SUPERFAMILY SSF160544 245 351 6.54E-37 T 14-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 Gene3D G3DSA:3.40.1690.10 220 356 4.8E-53 T 14-09-2016 IPR029025 Type III secretion system substrate exporter, C-terminal AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 354 1.2E-117 T 14-09-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 3.0E-37 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 3.0E-37 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.0E-37 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 3.0E-37 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 3.0E-37 T 14-09-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AMK01_RS03445 3c9fd7be10c2bc881c783b68bd297400 359 PANTHER PTHR30531:SF0 1 359 5.1E-108 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Pfam PF08448 PAS fold 206 312 6.5E-8 T 14-09-2016 IPR013656 PAS fold-4 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SUPERFAMILY SSF55874 654 826 2.36E-45 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SMART SM00388 600 665 1.0E-24 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SUPERFAMILY SSF47384 585 667 1.1E-22 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Gene3D G3DSA:3.30.450.20 22 80 3.2E-5 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Gene3D G3DSA:3.30.450.20 458 579 2.9E-6 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 PANTHER PTHR24423 543 831 8.3E-174 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 PANTHER PTHR24423 198 398 8.3E-174 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 PANTHER PTHR24423 997 1127 8.3E-174 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Gene3D G3DSA:3.30.565.10 651 827 4.5E-45 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Pfam PF12860 PAS fold 339 452 7.9E-9 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Pfam PF12860 PAS fold 475 584 4.4E-10 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Gene3D G3DSA:3.30.450.20 311 398 5.4E-8 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Pfam PF13426 PAS domain 24 81 0.067 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Pfam PF00072 Response regulator receiver domain 1010 1123 9.1E-26 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Pfam PF00072 Response regulator receiver domain 847 962 4.9E-15 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Gene3D G3DSA:3.40.50.2300 843 974 1.2E-28 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SUPERFAMILY SSF55785 199 311 1.22E-17 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 712 826 2.1E-27 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SUPERFAMILY SSF52172 1009 1135 8.11E-36 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SMART SM00387 712 828 5.2E-36 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Gene3D G3DSA:3.40.50.2300 998 1134 3.2E-40 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SUPERFAMILY SSF52172 843 985 2.7E-29 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Gene3D G3DSA:3.30.450.20 201 310 3.5E-16 T 14-09-2016 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Gene3D G3DSA:1.10.287.130 592 650 5.4E-18 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SUPERFAMILY SSF55785 309 386 3.62E-8 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SMART SM00448 1008 1123 5.8E-34 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SMART SM00448 845 963 1.7E-21 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 200 320 9.1E-12 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SMART SM00091 200 266 8.1E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SMART SM00091 332 399 6.9E-4 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SMART SM00091 467 534 14.0 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SMART SM00091 9 75 1.9 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 Pfam PF00512 His Kinase A (phospho-acceptor) domain 600 665 3.2E-20 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 SUPERFAMILY SSF55785 485 589 3.66E-6 T 14-09-2016 IPR000014 PAS domain AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 PRINTS PR00344 Bacterial sensor protein C-terminal signature 753 767 7.7E-16 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 PRINTS PR00344 Bacterial sensor protein C-terminal signature 812 825 7.7E-16 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 PRINTS PR00344 Bacterial sensor protein C-terminal signature 771 781 7.7E-16 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS16020 fb142ccf6136b9810b4e0ee2022accd2 1139 PRINTS PR00344 Bacterial sensor protein C-terminal signature 788 806 7.7E-16 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Gene3D G3DSA:3.30.1360.40 245 341 1.2E-27 T 14-09-2016 IPR024946 Arginine repressor C-terminal-like domain AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 SUPERFAMILY SSF101904 513 748 2.35E-49 T 14-09-2016 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 SUPERFAMILY SSF56719 39 488 2.35E-157 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 12 750 32.966 T 14-09-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Gene3D G3DSA:3.90.199.10 39 244 1.4E-109 T 14-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Gene3D G3DSA:3.90.199.10 343 408 1.4E-109 T 14-09-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 614 643 0.059 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 560 607 0.74 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 658 695 2.3E-6 T 14-09-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 471 1.2E-141 T 14-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 18 749 1.3E-269 T 14-09-2016 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 PANTHER PTHR10169:SF48 12 624 2.8E-194 T 14-09-2016 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 Gene3D G3DSA:2.120.10.90 512 740 1.0E-25 T 14-09-2016 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 PANTHER PTHR10169 12 624 2.8E-194 T 14-09-2016 AMK01_RS07635 03b1591e6e94abf885e754a40646ef87 751 SMART SM00434 19 471 1.2E-230 T 14-09-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS09965 c70613cdd77863fef952e83f5d47e071 247 Gene3D G3DSA:3.40.50.300 5 230 4.4E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09965 c70613cdd77863fef952e83f5d47e071 247 PANTHER PTHR24220:SF33 8 229 3.5E-84 T 14-09-2016 AMK01_RS09965 c70613cdd77863fef952e83f5d47e071 247 Pfam PF00005 ABC transporter 22 166 2.4E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS09965 c70613cdd77863fef952e83f5d47e071 247 PANTHER PTHR24220 8 229 3.5E-84 T 14-09-2016 AMK01_RS09965 c70613cdd77863fef952e83f5d47e071 247 SMART SM00382 31 223 1.3E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS09965 c70613cdd77863fef952e83f5d47e071 247 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS09965 c70613cdd77863fef952e83f5d47e071 247 SUPERFAMILY SSF52540 7 228 4.53E-54 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07285 b537f703834cbc26091a858451568965 159 PANTHER PTHR33337 4 128 2.3E-41 T 14-09-2016 AMK01_RS07285 b537f703834cbc26091a858451568965 159 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 106 1.1E-17 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS07285 b537f703834cbc26091a858451568965 159 Gene3D G3DSA:3.90.1590.10 2 157 2.2E-44 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS07285 b537f703834cbc26091a858451568965 159 SUPERFAMILY SSF51316 1 127 5.34E-42 T 14-09-2016 IPR011057 Mss4-like AMK01_RS07285 b537f703834cbc26091a858451568965 159 PANTHER PTHR33337:SF4 4 128 2.3E-41 T 14-09-2016 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 PRINTS PR00050 Cold shock protein signature 141 150 4.0E-8 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 PRINTS PR00050 Cold shock protein signature 156 174 4.0E-8 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 PRINTS PR00050 Cold shock protein signature 120 135 4.0E-8 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 Gene3D G3DSA:2.40.50.140 121 181 6.0E-20 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 Gene3D G3DSA:2.40.50.140 26 88 1.2E-19 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 PANTHER PTHR11544 10 192 2.4E-75 T 14-09-2016 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 SUPERFAMILY SSF50249 25 90 2.79E-17 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 PANTHER PTHR11544:SF43 10 192 2.4E-75 T 14-09-2016 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 SUPERFAMILY SSF50249 118 181 4.07E-17 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 Pfam PF00313 'Cold-shock' DNA-binding domain 27 88 8.7E-15 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 Pfam PF00313 'Cold-shock' DNA-binding domain 119 180 2.2E-15 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 SMART SM00357 27 91 2.2E-9 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AMK01_RS09545 d24cc23dd294bf3ae8ecf1fd84d8fe72 192 SMART SM00357 119 183 5.5E-12 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AMK01_RS15715 f8197573c7f8043be31ea245f43a532b 281 Gene3D G3DSA:1.10.3720.10 86 269 1.1E-34 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15715 f8197573c7f8043be31ea245f43a532b 281 SUPERFAMILY SSF161098 87 273 1.83E-41 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15715 f8197573c7f8043be31ea245f43a532b 281 PANTHER PTHR30177 7 277 4.5E-109 T 14-09-2016 AMK01_RS15715 f8197573c7f8043be31ea245f43a532b 281 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 2.1E-135 T 14-09-2016 IPR017784 ABC transporter, choline, permease protein AMK01_RS15715 f8197573c7f8043be31ea245f43a532b 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 268 3.2E-23 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15715 f8197573c7f8043be31ea245f43a532b 281 PANTHER PTHR30177:SF2 7 277 4.5E-109 T 14-09-2016 AMK01_RS04705 61159fd50eb1290e820ece5734b8dda3 128 Gene3D G3DSA:2.60.120.10 1 111 1.9E-13 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS04705 61159fd50eb1290e820ece5734b8dda3 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 33.445 T 14-09-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 AMK01_RS04705 61159fd50eb1290e820ece5734b8dda3 128 PANTHER PTHR39289:SF1 1 121 5.4E-51 T 14-09-2016 AMK01_RS04705 61159fd50eb1290e820ece5734b8dda3 128 Pfam PF06339 Ectoine synthase 1 124 2.5E-48 T 14-09-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 AMK01_RS04705 61159fd50eb1290e820ece5734b8dda3 128 PANTHER PTHR39289 1 121 5.4E-51 T 14-09-2016 AMK01_RS04705 61159fd50eb1290e820ece5734b8dda3 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 128 4.0E-55 T 14-09-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 AMK01_RS04705 61159fd50eb1290e820ece5734b8dda3 128 SUPERFAMILY SSF51182 1 114 1.81E-20 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 314 1.0E-25 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 Gene3D G3DSA:3.40.50.300 11 258 1.4E-76 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 SMART SM00382 40 228 1.0E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 PANTHER PTHR24220:SF493 7 314 1.2E-165 T 14-09-2016 AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 295 3.3E-18 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 PANTHER PTHR24220 7 314 1.2E-165 T 14-09-2016 AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 SUPERFAMILY SSF52540 9 249 1.02E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03875 45db63a534d2fe6dca71462ba137827e 317 Pfam PF00005 ABC transporter 31 178 1.1E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS03690 54e9005e71bd5b58a1c5186f80c8bc30 337 Gene3D G3DSA:1.20.58.370 55 83 4.5E-4 T 14-09-2016 AMK01_RS03690 54e9005e71bd5b58a1c5186f80c8bc30 337 PANTHER PTHR30193 29 329 2.0E-97 T 14-09-2016 AMK01_RS03690 54e9005e71bd5b58a1c5186f80c8bc30 337 PANTHER PTHR30193:SF18 29 329 2.0E-97 T 14-09-2016 AMK01_RS03690 54e9005e71bd5b58a1c5186f80c8bc30 337 Gene3D G3DSA:1.10.3720.10 102 333 6.7E-51 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03690 54e9005e71bd5b58a1c5186f80c8bc30 337 SUPERFAMILY SSF161098 95 320 1.02E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03690 54e9005e71bd5b58a1c5186f80c8bc30 337 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 326 7.5E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 SUPERFAMILY SSF50715 5 191 7.32E-63 T 14-09-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 98 4.0E-44 T 14-09-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 187 6.3E-30 T 14-09-2016 IPR020057 Ribosomal protein L25, beta domain AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 PANTHER PTHR33284 6 204 2.9E-60 T 14-09-2016 AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 Gene3D G3DSA:2.40.240.10 6 98 2.0E-34 T 14-09-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 185 3.9E-47 T 14-09-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 188 30.559 T 14-09-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 Gene3D G3DSA:2.170.120.20 101 192 3.1E-32 T 14-09-2016 IPR020057 Ribosomal protein L25, beta domain AMK01_RS15425 83c464cb5f52b00cd8b7b0bd207d713f 204 Pfam PF01386 Ribosomal L25p family 8 95 3.2E-26 T 14-09-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMK01_RS10500 4ada96c75ea65bbc1af2beceb8d54783 434 SUPERFAMILY SSF53850 33 427 6.92E-62 T 14-09-2016 AMK01_RS10500 4ada96c75ea65bbc1af2beceb8d54783 434 PANTHER PTHR30061 31 431 4.0E-87 T 14-09-2016 AMK01_RS10500 4ada96c75ea65bbc1af2beceb8d54783 434 Gene3D G3DSA:3.40.190.10 35 222 2.9E-36 T 14-09-2016 AMK01_RS10500 4ada96c75ea65bbc1af2beceb8d54783 434 Pfam PF13416 Bacterial extracellular solute-binding protein 56 369 1.4E-34 T 14-09-2016 AMK01_RS10500 4ada96c75ea65bbc1af2beceb8d54783 434 PANTHER PTHR30061:SF27 31 431 4.0E-87 T 14-09-2016 AMK01_RS18210 cfdb86c0fc158fb4417ceea755565251 86 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.0E-7 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS18210 cfdb86c0fc158fb4417ceea755565251 86 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 2.0E-7 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS18210 cfdb86c0fc158fb4417ceea755565251 86 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 2.0E-7 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS18210 cfdb86c0fc158fb4417ceea755565251 86 PANTHER PTHR33154 7 86 8.7E-15 T 14-09-2016 AMK01_RS18210 cfdb86c0fc158fb4417ceea755565251 86 SMART SM00418 5 82 1.2E-14 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS18210 cfdb86c0fc158fb4417ceea755565251 86 Pfam PF12840 Helix-turn-helix domain 6 62 3.3E-14 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18210 cfdb86c0fc158fb4417ceea755565251 86 Gene3D G3DSA:1.10.10.10 7 85 8.1E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18210 cfdb86c0fc158fb4417ceea755565251 86 SUPERFAMILY SSF46785 5 85 4.67E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02440 4fb035aba1cf0cbc016179efe3d4122c 425 PIRSF PIRSF033909 6 374 6.4E-149 T 14-09-2016 IPR014586 Uncharacterised conserved protein UCP033909 AMK01_RS02440 4fb035aba1cf0cbc016179efe3d4122c 425 Gene3D G3DSA:3.40.50.1820 131 344 5.8E-19 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS02440 4fb035aba1cf0cbc016179efe3d4122c 425 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 121 343 3.9E-86 T 14-09-2016 IPR010297 Protein of unknown function DUF900, hydrolase-like AMK01_RS02440 4fb035aba1cf0cbc016179efe3d4122c 425 SUPERFAMILY SSF53474 130 296 1.07E-15 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS00030 5b3a4cf381b419fa6d8692ec9ac44a23 240 SMART SM00479 2 172 8.0E-47 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK01_RS00030 5b3a4cf381b419fa6d8692ec9ac44a23 240 PANTHER PTHR30231:SF0 1 181 1.7E-74 T 14-09-2016 AMK01_RS00030 5b3a4cf381b419fa6d8692ec9ac44a23 240 Pfam PF00929 Exonuclease 4 163 2.5E-36 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK01_RS00030 5b3a4cf381b419fa6d8692ec9ac44a23 240 PANTHER PTHR30231 1 181 1.7E-74 T 14-09-2016 AMK01_RS00030 5b3a4cf381b419fa6d8692ec9ac44a23 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 180 1.2E-49 T 14-09-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS00030 5b3a4cf381b419fa6d8692ec9ac44a23 240 SUPERFAMILY SSF53098 1 170 3.04E-54 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS00030 5b3a4cf381b419fa6d8692ec9ac44a23 240 Gene3D G3DSA:3.30.420.10 1 171 2.2E-62 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS00030 5b3a4cf381b419fa6d8692ec9ac44a23 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 234 1.4E-70 T 14-09-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 SMART SM00829 12 321 6.6E-22 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 SUPERFAMILY SSF51735 115 256 2.41E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 88 4.2E-8 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 Gene3D G3DSA:3.90.180.10 7 147 8.2E-38 T 14-09-2016 IPR011032 GroES-like AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 Pfam PF00107 Zinc-binding dehydrogenase 153 249 8.6E-21 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 PANTHER PTHR11695 17 323 6.1E-89 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 SUPERFAMILY SSF50129 7 146 1.26E-30 T 14-09-2016 IPR011032 GroES-like AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 PANTHER PTHR11695:SF605 17 323 6.1E-89 T 14-09-2016 AMK01_RS05775 6a4b574f9fb38d76bc60069829ed1f17 323 Gene3D G3DSA:3.40.50.720 148 252 6.3E-24 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS03630 0490ff03724e421c984db266223c408c 88 PIRSF PIRSF004669 1 88 3.8E-25 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK01_RS03630 0490ff03724e421c984db266223c408c 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 4.6E-26 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK01_RS03630 0490ff03724e421c984db266223c408c 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.4E-19 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK01_RS03630 0490ff03724e421c984db266223c408c 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.4E-19 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK01_RS03630 0490ff03724e421c984db266223c408c 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.4E-19 T 14-09-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AMK01_RS03630 0490ff03724e421c984db266223c408c 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 1.2E-28 T 14-09-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AMK01_RS03630 0490ff03724e421c984db266223c408c 88 PANTHER PTHR34040 1 86 3.2E-27 T 14-09-2016 AMK01_RS03630 0490ff03724e421c984db266223c408c 88 PANTHER PTHR34040:SF2 1 86 3.2E-27 T 14-09-2016 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 PANTHER PTHR23420 177 466 0.0 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 PANTHER PTHR23420 1 141 0.0 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 458 2.7E-181 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 Gene3D G3DSA:3.40.50.1480 387 466 7.8E-147 T 14-09-2016 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 Gene3D G3DSA:3.40.50.1480 6 228 7.8E-147 T 14-09-2016 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 249 266 - T 14-09-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 458 47.301 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 SUPERFAMILY SSF52283 5 143 8.5E-114 T 14-09-2016 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 SUPERFAMILY SSF52283 387 466 8.5E-114 T 14-09-2016 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 SUPERFAMILY SSF52283 179 226 8.5E-114 T 14-09-2016 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 SMART SM00997 227 386 2.5E-106 T 14-09-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 14-09-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 SMART SM00996 6 465 0.0 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 PIRSF PIRSF001109 1 466 1.0E-184 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 Gene3D G3DSA:3.40.50.720 229 385 5.5E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 465 7.0E-145 T 14-09-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 SUPERFAMILY SSF51735 227 386 3.08E-75 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00160 d36b90cbec54b241f9d66acb007fb037 466 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 227 386 2.1E-80 T 14-09-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 Pfam PF12860 PAS fold 124 234 3.6E-26 T 14-09-2016 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 Pfam PF12860 PAS fold 9 106 6.4E-11 T 14-09-2016 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 PANTHER PTHR24423 256 502 5.2E-84 T 14-09-2016 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 PANTHER PTHR24423 5 230 5.2E-84 T 14-09-2016 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 Gene3D G3DSA:3.30.565.10 349 500 1.3E-42 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 Gene3D G3DSA:1.10.287.130 267 337 1.0E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 SUPERFAMILY SSF55785 5 84 4.19E-6 T 14-09-2016 IPR000014 PAS domain AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 Gene3D G3DSA:3.30.450.20 111 230 2.5E-9 T 14-09-2016 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 Gene3D G3DSA:3.30.450.20 5 104 9.6E-10 T 14-09-2016 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 SUPERFAMILY SSF55785 103 230 2.26E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 SMART SM00388 277 345 5.9E-13 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 SUPERFAMILY SSF55874 335 497 4.71E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 SUPERFAMILY SSF47384 261 346 1.51E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 4.4E-18 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 4.4E-18 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 4.4E-18 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 454 4.4E-18 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 SMART SM00091 118 186 34.0 T 14-09-2016 IPR000014 PAS domain AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 SMART SM00091 3 68 0.041 T 14-09-2016 IPR000014 PAS domain AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 345 5.3E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 SMART SM00387 389 499 1.2E-37 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS08655 50738d14f65e334d79a4b4748f3e772f 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 497 1.1E-25 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS19370 feadcbeb93606d05e405298b123388a2 268 SUPERFAMILY SSF55729 83 262 1.53E-21 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19370 feadcbeb93606d05e405298b123388a2 268 PANTHER PTHR23091 200 255 9.8E-13 T 14-09-2016 AMK01_RS19370 feadcbeb93606d05e405298b123388a2 268 Pfam PF00583 Acetyltransferase (GNAT) family 194 255 2.6E-13 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS19370 feadcbeb93606d05e405298b123388a2 268 Gene3D G3DSA:3.40.630.30 161 257 2.9E-17 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS13040 07d3c4ce62acce8d868074e211bcbe28 131 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 129 1.8E-33 T 14-09-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AMK01_RS13040 07d3c4ce62acce8d868074e211bcbe28 131 PANTHER PTHR33797:SF3 1 126 7.3E-66 T 14-09-2016 AMK01_RS13040 07d3c4ce62acce8d868074e211bcbe28 131 SUPERFAMILY SSF82784 3 130 5.76E-31 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS13040 07d3c4ce62acce8d868074e211bcbe28 131 PANTHER PTHR33797 1 126 7.3E-66 T 14-09-2016 AMK01_RS13040 07d3c4ce62acce8d868074e211bcbe28 131 Gene3D G3DSA:2.20.25.10 1 36 4.0E-9 T 14-09-2016 AMK01_RS13040 07d3c4ce62acce8d868074e211bcbe28 131 Pfam PF02566 OsmC-like protein 37 129 2.7E-13 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS13040 07d3c4ce62acce8d868074e211bcbe28 131 Gene3D G3DSA:3.30.300.20 40 130 1.7E-28 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 SUPERFAMILY SSF52540 6 319 2.79E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 SMART SM00833 261 376 1.3E-51 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 PANTHER PTHR13748:SF4 350 388 5.9E-171 T 14-09-2016 AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 PANTHER PTHR13748:SF4 1 334 5.9E-171 T 14-09-2016 AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 212 6.4E-53 T 14-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 Gene3D G3DSA:3.40.50.300 6 232 3.9E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 Gene3D G3DSA:3.30.1220.10 248 377 7.6E-19 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 PANTHER PTHR13748 350 388 5.9E-171 T 14-09-2016 AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 PANTHER PTHR13748 1 334 5.9E-171 T 14-09-2016 AMK01_RS07010 a7b74526d9cfa20af495965797b6f667 394 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 261 376 7.0E-29 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS00390 fea1b912b7a4d1aebcf877580977f3b5 618 PIRSF PIRSF014753 2 603 4.7E-196 T 14-09-2016 IPR016624 Uncharacterised conserved protein UCP014753 AMK01_RS00390 fea1b912b7a4d1aebcf877580977f3b5 618 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 18 356 1.0E-129 T 14-09-2016 IPR016624 Uncharacterised conserved protein UCP014753 AMK01_RS00390 fea1b912b7a4d1aebcf877580977f3b5 618 PANTHER PTHR35339:SF1 14 575 1.2E-165 T 14-09-2016 AMK01_RS00390 fea1b912b7a4d1aebcf877580977f3b5 618 PANTHER PTHR35339 14 575 1.2E-165 T 14-09-2016 AMK01_RS15860 909438fe231e8af67d8f3b4179aad294 353 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 7.7E-159 T 14-09-2016 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative AMK01_RS15860 909438fe231e8af67d8f3b4179aad294 353 SUPERFAMILY SSF51679 1 340 4.06E-81 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS15860 909438fe231e8af67d8f3b4179aad294 353 PANTHER PTHR30137:SF8 1 349 1.6E-119 T 14-09-2016 AMK01_RS15860 909438fe231e8af67d8f3b4179aad294 353 Pfam PF00296 Luciferase-like monooxygenase 4 301 4.2E-50 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS15860 909438fe231e8af67d8f3b4179aad294 353 Gene3D G3DSA:3.20.20.30 1 348 1.7E-94 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS15860 909438fe231e8af67d8f3b4179aad294 353 PANTHER PTHR30137 1 349 1.6E-119 T 14-09-2016 AMK01_RS07985 858d5faa80e07afb3d21d93b7725fbb2 172 Pfam PF13238 AAA domain 4 120 2.9E-13 T 14-09-2016 AMK01_RS07985 858d5faa80e07afb3d21d93b7725fbb2 172 Gene3D G3DSA:3.40.50.300 2 169 2.9E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07985 858d5faa80e07afb3d21d93b7725fbb2 172 SUPERFAMILY SSF52540 2 168 3.41E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 Pfam PF00361 Proton-conducting membrane transporter 128 416 2.9E-78 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 1.5E-45 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 1.5E-45 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 1.5E-45 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 1.5E-45 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 1.5E-45 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 PANTHER PTHR22773:SF40 1 485 1.1E-203 T 14-09-2016 AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 PANTHER PTHR22773 1 485 1.1E-203 T 14-09-2016 AMK01_RS17490 a95ea0291eb2b7a2fe57ca87ebb20568 491 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 483 3.2E-192 T 14-09-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 AMK01_RS07890 830dfa7b0c4724047aae6e214f195008 389 Gene3D G3DSA:3.40.50.2000 199 347 8.9E-20 T 14-09-2016 AMK01_RS07890 830dfa7b0c4724047aae6e214f195008 389 PANTHER PTHR12526 4 377 1.3E-44 T 14-09-2016 AMK01_RS07890 830dfa7b0c4724047aae6e214f195008 389 Pfam PF13439 Glycosyltransferase Family 4 17 189 1.7E-22 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK01_RS07890 830dfa7b0c4724047aae6e214f195008 389 Pfam PF00534 Glycosyl transferases group 1 201 343 4.9E-21 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS07890 830dfa7b0c4724047aae6e214f195008 389 PANTHER PTHR12526:SF387 4 377 1.3E-44 T 14-09-2016 AMK01_RS07890 830dfa7b0c4724047aae6e214f195008 389 SUPERFAMILY SSF53756 11 377 1.26E-60 T 14-09-2016 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 PIRSF PIRSF002936 15 317 2.6E-143 T 14-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 PANTHER PTHR23293 23 173 3.1E-84 T 14-09-2016 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 SUPERFAMILY SSF52402 22 225 1.13E-68 T 14-09-2016 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 PANTHER PTHR23293 193 226 3.1E-84 T 14-09-2016 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 PANTHER PTHR23293:SF6 193 226 3.1E-84 T 14-09-2016 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 PANTHER PTHR23293:SF6 23 173 3.1E-84 T 14-09-2016 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 Gene3D G3DSA:3.40.50.620 9 225 1.8E-57 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS05810 1210611afc2c1316347faff856230f71 317 Gene3D G3DSA:3.40.50.620 259 267 1.8E-57 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS05810 1210611afc2c1316347faff856230f71 317 PANTHER PTHR23293:SF6 260 317 3.1E-84 T 14-09-2016 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 19 317 57.12 T 14-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 45 272 1.1E-59 T 14-09-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 24 317 3.0E-157 T 14-09-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 AMK01_RS05810 1210611afc2c1316347faff856230f71 317 PANTHER PTHR23293 260 317 3.1E-84 T 14-09-2016 AMK01_RS14275 3161c1a084f892246fb36f3d5c4c6586 219 SUPERFAMILY SSF50090 1 218 3.73E-84 T 14-09-2016 IPR008990 Electron transport accessory protein-like domain AMK01_RS14275 3161c1a084f892246fb36f3d5c4c6586 219 Gene3D G3DSA:2.30.30.50 134 218 2.0E-37 T 14-09-2016 AMK01_RS14275 3161c1a084f892246fb36f3d5c4c6586 219 PIRSF PIRSF001427 1 219 2.0E-71 T 14-09-2016 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS14275 3161c1a084f892246fb36f3d5c4c6586 219 Pfam PF02211 Nitrile hydratase beta subunit 1 217 1.2E-86 T 14-09-2016 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS14275 3161c1a084f892246fb36f3d5c4c6586 219 Gene3D G3DSA:1.10.472.20 1 133 3.4E-50 T 14-09-2016 AMK01_RS14275 3161c1a084f892246fb36f3d5c4c6586 219 TIGRFAM TIGR03888 nitrile_beta: nitrile hydratase, beta subunit 1 218 1.1E-75 T 14-09-2016 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 SUPERFAMILY SSF53822 62 333 3.53E-70 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 PANTHER PTHR30146 3 333 7.5E-110 T 14-09-2016 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 Gene3D G3DSA:3.40.50.2300 172 308 1.3E-46 T 14-09-2016 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 3.4E-5 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 3.4E-5 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 SUPERFAMILY SSF47413 3 60 1.37E-17 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 Pfam PF13377 Periplasmic binding protein-like domain 165 330 2.0E-32 T 14-09-2016 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 Gene3D G3DSA:1.10.260.40 5 55 2.5E-24 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 Gene3D G3DSA:3.40.50.2300 56 171 3.4E-42 T 14-09-2016 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 SMART SM00354 3 73 5.5E-30 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS03245 86eb28202f43e685e93ac4bd471cf4b5 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 8.7E-18 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS01750 7cc1508be004ebd64fdf292d7f25f932 95 PANTHER PTHR41521 1 95 3.9E-22 T 14-09-2016 AMK01_RS01750 7cc1508be004ebd64fdf292d7f25f932 95 Pfam PF07045 Domain of unknown function (DUF1330) 3 95 1.3E-37 T 14-09-2016 IPR010753 Domain of unknown function DUF1330 AMK01_RS01750 7cc1508be004ebd64fdf292d7f25f932 95 SUPERFAMILY SSF54909 1 95 1.31E-33 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS01750 7cc1508be004ebd64fdf292d7f25f932 95 Gene3D G3DSA:3.30.70.900 1 95 7.2E-38 T 14-09-2016 AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 Gene3D G3DSA:1.10.10.10 123 223 1.1E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 Pfam PF00072 Response regulator receiver domain 3 112 2.7E-25 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 Gene3D G3DSA:3.40.50.2300 1 122 9.2E-35 T 14-09-2016 AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 SMART SM00862 145 221 1.2E-20 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 SUPERFAMILY SSF52172 1 174 6.83E-38 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 6.3E-20 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 PANTHER PTHR26402 1 224 2.4E-118 T 14-09-2016 AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 PANTHER PTHR26402:SF553 1 224 2.4E-118 T 14-09-2016 AMK01_RS17145 71f0f0e4ce8fdcec392a038726b2f63b 233 SMART SM00448 1 112 8.3E-38 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PANTHER PTHR10422 99 566 0.0 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PANTHER PTHR10422 21 81 0.0 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 289 343 - T 14-09-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PANTHER PTHR10422:SF27 99 566 0.0 T 14-09-2016 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PANTHER PTHR10422:SF27 21 81 0.0 T 14-09-2016 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 SUPERFAMILY SSF81442 33 565 3.14E-218 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 124 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 420 439 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 129 153 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 188 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 392 410 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 236 255 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 36 61 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 207 225 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 470 491 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 287 308 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 378 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 PRINTS PR01165 Cytochrome c oxidase subunit I signature 333 348 1.6E-149 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 45 512 5.7E-156 T 14-09-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 Gene3D G3DSA:1.20.210.10 48 532 3.1E-234 T 14-09-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS04850 718a4429fc0ca720b718783ec1d121f7 566 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 37 564 3.0E-222 T 14-09-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 AMK01_RS03850 5f7aced0f696a28fabe998e943cf84ef 160 PANTHER PTHR33221:SF4 2 154 1.1E-44 T 14-09-2016 AMK01_RS03850 5f7aced0f696a28fabe998e943cf84ef 160 SUPERFAMILY SSF46785 2 134 2.18E-36 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03850 5f7aced0f696a28fabe998e943cf84ef 160 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 2.1E-34 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS03850 5f7aced0f696a28fabe998e943cf84ef 160 Gene3D G3DSA:1.10.10.10 1 134 5.6E-42 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03850 5f7aced0f696a28fabe998e943cf84ef 160 PANTHER PTHR33221 2 154 1.1E-44 T 14-09-2016 AMK01_RS03850 5f7aced0f696a28fabe998e943cf84ef 160 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-09-2016 IPR030489 Transcription regulator Rrf2-type, conserved site AMK01_RS03850 5f7aced0f696a28fabe998e943cf84ef 160 Pfam PF02082 Transcriptional regulator 1 81 3.1E-26 T 14-09-2016 IPR000944 Transcription regulator Rrf2-type AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 SUPERFAMILY SSF51395 1 323 7.0E-70 T 14-09-2016 AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 382 393 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 Gene3D G3DSA:3.20.20.70 7 311 2.4E-73 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 PANTHER PTHR11938 3 401 1.1E-85 T 14-09-2016 AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 PANTHER PTHR11938:SF102 3 401 1.1E-85 T 14-09-2016 AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 Pfam PF14697 4Fe-4S dicluster domain 340 400 6.8E-24 T 14-09-2016 AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 322 8.5E-50 T 14-09-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 SUPERFAMILY SSF54862 340 405 6.8E-15 T 14-09-2016 AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 Gene3D G3DSA:3.30.70.20 323 406 2.5E-18 T 14-09-2016 AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 347 358 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS16880 60ccfbbec4453447ed71b6d62f74ae16 437 Pfam PF01180 Dihydroorotate dehydrogenase 5 307 4.1E-25 T 14-09-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMK01_RS04135 d3095c6fd538bce183b9773ab1436ab5 399 PANTHER PTHR11748 4 398 1.5E-81 T 14-09-2016 AMK01_RS04135 d3095c6fd538bce183b9773ab1436ab5 399 Pfam PF02913 FAD linked oxidases, C-terminal domain 373 397 6.8E-4 T 14-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMK01_RS04135 d3095c6fd538bce183b9773ab1436ab5 399 PANTHER PTHR11748:SF1 4 398 1.5E-81 T 14-09-2016 AMK01_RS04135 d3095c6fd538bce183b9773ab1436ab5 399 Pfam PF01565 FAD binding domain 5 144 1.1E-17 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS04135 d3095c6fd538bce183b9773ab1436ab5 399 SUPERFAMILY SSF55103 197 399 2.13E-23 T 14-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK01_RS04135 d3095c6fd538bce183b9773ab1436ab5 399 Gene3D G3DSA:1.10.45.10 377 399 3.9E-6 T 14-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMK01_RS04135 d3095c6fd538bce183b9773ab1436ab5 399 Gene3D G3DSA:3.30.465.10 55 182 3.5E-18 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS04135 d3095c6fd538bce183b9773ab1436ab5 399 SUPERFAMILY SSF56176 4 182 1.03E-32 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 Pfam PF13545 Crp-like helix-turn-helix domain 162 237 1.3E-18 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 SUPERFAMILY SSF51206 22 157 2.09E-27 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 PANTHER PTHR24567 15 237 1.9E-45 T 14-09-2016 AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 PANTHER PTHR24567:SF28 15 237 1.9E-45 T 14-09-2016 AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 ProSitePatterns PS00042 Crp-type HTH domain signature. 189 212 - T 14-09-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 SUPERFAMILY SSF46785 159 237 4.37E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 Pfam PF00027 Cyclic nucleotide-binding domain 45 128 9.8E-8 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 203 2.2E-12 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 203 218 2.2E-12 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 Gene3D G3DSA:1.10.10.10 165 237 6.0E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 SMART SM00419 181 230 1.1E-17 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 SMART SM00100 27 145 2.4E-13 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS12680 1bb5842348ac28de833fab02a19c5c0f 239 Gene3D G3DSA:2.60.120.10 27 164 1.5E-18 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS00375 115fa8ff1912ace91f432d3314057f54 323 Gene3D G3DSA:3.20.20.80 41 319 1.3E-40 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS00375 115fa8ff1912ace91f432d3314057f54 323 SUPERFAMILY SSF51445 54 320 3.74E-53 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS00375 115fa8ff1912ace91f432d3314057f54 323 Pfam PF02156 Glycosyl hydrolase family 26 129 237 2.4E-7 T 14-09-2016 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 AMK01_RS19780 bd3808b1bd5be0a3a7e1ed65e442e93b 85 Pfam PF13488 Glycine zipper 23 62 2.1E-9 T 14-09-2016 AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 PANTHER PTHR11933 11 382 8.7E-154 T 14-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 SUPERFAMILY SSF52402 13 260 4.41E-51 T 14-09-2016 AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 PANTHER PTHR11933:SF10 11 382 8.7E-154 T 14-09-2016 AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 Gene3D G3DSA:2.30.30.280 235 288 2.7E-16 T 14-09-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 Pfam PF03054 tRNA methyl transferase 14 376 1.5E-108 T 14-09-2016 AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 14 376 1.4E-90 T 14-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 Gene3D G3DSA:3.40.50.620 8 225 5.6E-82 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 Gene3D G3DSA:2.40.30.10 291 382 1.2E-17 T 14-09-2016 AMK01_RS17820 8421b08a153312b10890b7dd4a285f3b 399 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 13 377 38.742 T 14-09-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK01_RS15365 2530f9d5e66bda80366705feda9f93c2 217 Pfam PF00753 Metallo-beta-lactamase superfamily 12 195 1.5E-29 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS15365 2530f9d5e66bda80366705feda9f93c2 217 PANTHER PTHR11935:SF115 1 214 6.1E-96 T 14-09-2016 AMK01_RS15365 2530f9d5e66bda80366705feda9f93c2 217 Gene3D G3DSA:3.60.15.10 8 213 4.1E-55 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS15365 2530f9d5e66bda80366705feda9f93c2 217 SMART SM00849 15 195 4.1E-36 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS15365 2530f9d5e66bda80366705feda9f93c2 217 PANTHER PTHR11935 1 214 6.1E-96 T 14-09-2016 AMK01_RS15365 2530f9d5e66bda80366705feda9f93c2 217 SUPERFAMILY SSF56281 4 212 1.76E-53 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS08640 d3ed91ba04fa4a9eb43298e61587beb4 187 PANTHER PTHR15364 4 181 3.0E-24 T 14-09-2016 AMK01_RS08640 d3ed91ba04fa4a9eb43298e61587beb4 187 PANTHER PTHR15364:SF1 4 181 3.0E-24 T 14-09-2016 AMK01_RS08640 d3ed91ba04fa4a9eb43298e61587beb4 187 SUPERFAMILY SSF52309 1 162 1.65E-36 T 14-09-2016 AMK01_RS08640 d3ed91ba04fa4a9eb43298e61587beb4 187 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 146 1.4E-37 T 14-09-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 AMK01_RS08640 d3ed91ba04fa4a9eb43298e61587beb4 187 Gene3D G3DSA:3.40.50.1810 2 103 1.9E-13 T 14-09-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 AMK01_RS17220 2f325202eeea7e2a2632f0f3adb57333 396 Gene3D G3DSA:2.40.50.100 183 215 6.6E-23 T 14-09-2016 AMK01_RS17220 2f325202eeea7e2a2632f0f3adb57333 396 Gene3D G3DSA:2.40.50.100 75 108 6.6E-23 T 14-09-2016 AMK01_RS17220 2f325202eeea7e2a2632f0f3adb57333 396 PANTHER PTHR30158:SF2 17 396 5.6E-152 T 14-09-2016 AMK01_RS17220 2f325202eeea7e2a2632f0f3adb57333 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 305 8.8E-14 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS17220 2f325202eeea7e2a2632f0f3adb57333 396 PANTHER PTHR30158 17 396 5.6E-152 T 14-09-2016 AMK01_RS17220 2f325202eeea7e2a2632f0f3adb57333 396 SUPERFAMILY SSF111369 64 309 1.96E-65 T 14-09-2016 AMK01_RS17220 2f325202eeea7e2a2632f0f3adb57333 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 386 3.0E-89 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS03320 637be5c58eac75c1c357e50203f616ac 141 PANTHER PTHR26402 7 127 3.8E-30 T 14-09-2016 AMK01_RS03320 637be5c58eac75c1c357e50203f616ac 141 SUPERFAMILY SSF52172 7 131 8.68E-32 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS03320 637be5c58eac75c1c357e50203f616ac 141 Gene3D G3DSA:3.40.50.2300 7 129 1.2E-33 T 14-09-2016 AMK01_RS03320 637be5c58eac75c1c357e50203f616ac 141 Pfam PF00072 Response regulator receiver domain 9 125 2.3E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03320 637be5c58eac75c1c357e50203f616ac 141 SMART SM00448 7 124 1.5E-25 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS14315 85d8cde3e385319efbf9beac04155b2d 679 Pfam PF01935 Domain of unknown function DUF87 148 387 3.2E-50 T 14-09-2016 IPR002789 Helicase HerA, central domain AMK01_RS14315 85d8cde3e385319efbf9beac04155b2d 679 SUPERFAMILY SSF52540 141 521 6.12E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14315 85d8cde3e385319efbf9beac04155b2d 679 PANTHER PTHR30121:SF1 95 526 2.8E-61 T 14-09-2016 AMK01_RS14315 85d8cde3e385319efbf9beac04155b2d 679 PANTHER PTHR30121 95 526 2.8E-61 T 14-09-2016 AMK01_RS14315 85d8cde3e385319efbf9beac04155b2d 679 Gene3D G3DSA:3.40.50.300 159 232 2.0E-33 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14315 85d8cde3e385319efbf9beac04155b2d 679 Gene3D G3DSA:3.40.50.300 349 519 2.0E-33 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 PANTHER PTHR11757 16 677 2.0E-145 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 SUPERFAMILY SSF53474 422 674 4.82E-46 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 Gene3D G3DSA:3.40.50.1820 336 676 3.2E-83 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 476 500 1.1E-40 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 610 632 1.1E-40 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 523 1.1E-40 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 534 554 1.1E-40 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 450 468 1.1E-40 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 589 604 1.1E-40 T 14-09-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 4 401 4.0E-14 T 14-09-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 SUPERFAMILY SSF50993 4 401 5.23E-21 T 14-09-2016 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 PANTHER PTHR11757:SF13 16 677 2.0E-145 T 14-09-2016 AMK01_RS07470 9b7355b02781c72b8ef446f1ce117179 679 Pfam PF00326 Prolyl oligopeptidase family 473 677 2.0E-47 T 14-09-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 PANTHER PTHR30027 5 245 7.7E-58 T 14-09-2016 AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 SUPERFAMILY SSF88697 6 76 5.22E-15 T 14-09-2016 IPR015947 PUA-like domain AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 7 243 2.1E-38 T 14-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 Gene3D G3DSA:3.40.1280.10 79 244 9.3E-48 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 SUPERFAMILY SSF75217 77 244 1.99E-45 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 Pfam PF04452 RNA methyltransferase 24 239 1.3E-56 T 14-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 PANTHER PTHR30027:SF3 5 245 7.7E-58 T 14-09-2016 AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 PIRSF PIRSF015601 6 244 2.1E-53 T 14-09-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS04110 fcc77cc781d138673b2038ddf58b1bd8 245 Gene3D G3DSA:2.40.240.20 4 77 4.7E-22 T 14-09-2016 AMK01_RS13365 7e30c9891feb543a1647fd55c67baefc 527 Pfam PF00999 Sodium/hydrogen exchanger family 12 404 5.5E-53 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK01_RS13365 7e30c9891feb543a1647fd55c67baefc 527 PANTHER PTHR10110:SF86 8 519 1.3E-83 T 14-09-2016 AMK01_RS13365 7e30c9891feb543a1647fd55c67baefc 527 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 10 521 3.2E-90 T 14-09-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AMK01_RS13365 7e30c9891feb543a1647fd55c67baefc 527 PANTHER PTHR10110 8 519 1.3E-83 T 14-09-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 AMK01_RS16610 9590a368873e874466a7c74a7beb7612 312 Pfam PF00535 Glycosyl transferase family 2 7 173 1.5E-29 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS16610 9590a368873e874466a7c74a7beb7612 312 Gene3D G3DSA:3.90.550.10 5 234 1.2E-41 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16610 9590a368873e874466a7c74a7beb7612 312 PANTHER PTHR22916 1 312 6.1E-39 T 14-09-2016 AMK01_RS16610 9590a368873e874466a7c74a7beb7612 312 SUPERFAMILY SSF53448 6 301 1.97E-47 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 Gene3D G3DSA:1.10.630.10 17 414 1.5E-102 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 Pfam PF00067 Cytochrome P450 289 386 2.9E-18 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 Pfam PF00067 Cytochrome P450 86 263 1.2E-6 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PANTHER PTHR11712:SF233 18 396 7.1E-74 T 14-09-2016 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 357 366 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 167 182 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 336 351 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 366 377 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 210 232 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 291 302 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 308 335 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 150 166 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PRINTS PR00359 B-class P450 signature 104 115 1.0E-42 T 14-09-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 PANTHER PTHR11712 18 396 7.1E-74 T 14-09-2016 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 SUPERFAMILY SSF48264 20 414 1.31E-78 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS08010 39c8f8d2a9ad7bc0ac8d159050ef80de 414 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 359 368 - T 14-09-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 AMK01_RS00045 8ea82c2d48c723b451a4b3afd940e255 234 SUPERFAMILY SSF54427 18 37 1.45E-52 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS00045 8ea82c2d48c723b451a4b3afd940e255 234 SUPERFAMILY SSF54427 80 230 1.45E-52 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS00045 8ea82c2d48c723b451a4b3afd940e255 234 PANTHER PTHR10721:SF2 83 232 3.2E-50 T 14-09-2016 AMK01_RS00045 8ea82c2d48c723b451a4b3afd940e255 234 SMART SM00978 85 231 2.8E-58 T 14-09-2016 IPR007379 Tim44-like domain AMK01_RS00045 8ea82c2d48c723b451a4b3afd940e255 234 Pfam PF04280 Tim44-like domain 86 230 1.6E-50 T 14-09-2016 IPR007379 Tim44-like domain AMK01_RS00045 8ea82c2d48c723b451a4b3afd940e255 234 PANTHER PTHR10721 83 232 3.2E-50 T 14-09-2016 AMK01_RS00045 8ea82c2d48c723b451a4b3afd940e255 234 PIRSF PIRSF031890 2 233 1.1E-87 T 14-09-2016 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related AMK01_RS13475 daccfc4c3987ec702778194d06a2885c 176 Gene3D G3DSA:3.90.1140.10 41 148 1.9E-15 T 14-09-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK01_RS13475 daccfc4c3987ec702778194d06a2885c 176 PANTHER PTHR36039 17 134 5.2E-12 T 14-09-2016 AMK01_RS13475 daccfc4c3987ec702778194d06a2885c 176 SUPERFAMILY SSF55144 36 160 3.4E-16 T 14-09-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK01_RS13475 daccfc4c3987ec702778194d06a2885c 176 Pfam PF13563 2'-5' RNA ligase superfamily 35 157 2.5E-16 T 14-09-2016 AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 PANTHER PTHR18895:SF64 1 283 3.6E-84 T 14-09-2016 AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 SUPERFAMILY SSF53335 5 281 2.69E-56 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 281 5.0E-84 T 14-09-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 PANTHER PTHR18895 1 283 3.6E-84 T 14-09-2016 AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 189 195 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 282 5.3E-68 T 14-09-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 Gene3D G3DSA:1.10.8.10 4 86 1.6E-21 T 14-09-2016 AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 Gene3D G3DSA:3.40.50.150 91 283 1.8E-62 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 285 41.296 T 14-09-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMK01_RS19305 db943a3e9c317e3196407a81fee84faf 286 Pfam PF05175 Methyltransferase small domain 113 200 1.1E-14 T 14-09-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK01_RS01730 a85b36e010c91c07f89a20d1c4eb0d99 230 PANTHER PTHR11260 3 214 8.2E-68 T 14-09-2016 AMK01_RS01730 a85b36e010c91c07f89a20d1c4eb0d99 230 Gene3D G3DSA:3.40.30.10 2 97 4.5E-24 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01730 a85b36e010c91c07f89a20d1c4eb0d99 230 PANTHER PTHR11260:SF286 3 214 8.2E-68 T 14-09-2016 AMK01_RS01730 a85b36e010c91c07f89a20d1c4eb0d99 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 146 206 1.9E-7 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AMK01_RS01730 a85b36e010c91c07f89a20d1c4eb0d99 230 SUPERFAMILY SSF52833 1 104 4.84E-17 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01730 a85b36e010c91c07f89a20d1c4eb0d99 230 SUPERFAMILY SSF47616 81 227 2.42E-26 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS01730 a85b36e010c91c07f89a20d1c4eb0d99 230 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 4.8E-12 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS01730 a85b36e010c91c07f89a20d1c4eb0d99 230 Gene3D G3DSA:1.20.1050.10 98 226 1.4E-36 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 PANTHER PTHR11075 6 355 6.1E-175 T 14-09-2016 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 SUPERFAMILY SSF75620 12 352 8.24E-127 T 14-09-2016 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 7 356 1.5E-153 T 14-09-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 Pfam PF00472 RF-1 domain 212 320 2.1E-42 T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 356 39.728 T 14-09-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 Gene3D G3DSA:3.30.160.20 211 287 3.9E-34 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 Pfam PF03462 PCRF domain 13 204 3.1E-67 T 14-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 SMART SM00937 64 179 1.8E-60 T 14-09-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 PANTHER PTHR11075:SF9 6 355 6.1E-175 T 14-09-2016 AMK01_RS19310 fb2e7c811245e629521882c820f79586 359 Gene3D G3DSA:1.20.58.410 9 94 1.6E-9 T 14-09-2016 AMK01_RS14545 d8a75375a9679f675a0980b8c69dd86d 196 PANTHER PTHR30231:SF10 4 179 7.6E-49 T 14-09-2016 AMK01_RS14545 d8a75375a9679f675a0980b8c69dd86d 196 Gene3D G3DSA:3.30.420.10 3 167 2.6E-39 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS14545 d8a75375a9679f675a0980b8c69dd86d 196 PANTHER PTHR30231 4 179 7.6E-49 T 14-09-2016 AMK01_RS14545 d8a75375a9679f675a0980b8c69dd86d 196 Pfam PF00929 Exonuclease 4 155 7.2E-15 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK01_RS14545 d8a75375a9679f675a0980b8c69dd86d 196 SUPERFAMILY SSF53098 2 164 1.77E-35 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS14545 d8a75375a9679f675a0980b8c69dd86d 196 SMART SM00479 2 166 1.8E-16 T 14-09-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK01_RS13915 e101f941cec3e3c79d773ec6be452e25 108 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 50 93 1.0E-9 T 14-09-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB AMK01_RS13915 e101f941cec3e3c79d773ec6be452e25 108 Pfam PF11776 Nickel/cobalt transporter regulator 53 102 6.5E-19 T 14-09-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB AMK01_RS10315 c821bd7e4c43866a9a7d39bda0508d6f 168 Pfam PF01936 NYN domain 1 58 9.3E-10 T 14-09-2016 IPR021139 NYN domain, limkain-b1-type AMK01_RS10315 c821bd7e4c43866a9a7d39bda0508d6f 168 Gene3D G3DSA:3.40.50.1010 2 63 1.1E-9 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS14700 ed4ef860a074fb88cf406d25aded1ce2 211 PIRSF PIRSF006324 1 208 1.0E-61 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS14700 ed4ef860a074fb88cf406d25aded1ce2 211 PANTHER PTHR30086:SF14 1 211 6.7E-53 T 14-09-2016 AMK01_RS14700 ed4ef860a074fb88cf406d25aded1ce2 211 Pfam PF01810 LysE type translocator 15 201 8.9E-32 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS14700 ed4ef860a074fb88cf406d25aded1ce2 211 PANTHER PTHR30086 1 211 6.7E-53 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS00200 c321b4f07fc94c164b9cd33bb4815506 203 PANTHER PTHR16557 48 203 4.4E-41 T 14-09-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 AMK01_RS00200 c321b4f07fc94c164b9cd33bb4815506 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 7 199 2.9E-56 T 14-09-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AMK01_RS00200 c321b4f07fc94c164b9cd33bb4815506 203 Gene3D G3DSA:2.60.120.590 3 202 3.2E-54 T 14-09-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AMK01_RS00200 c321b4f07fc94c164b9cd33bb4815506 203 SUPERFAMILY SSF51197 4 202 1.25E-55 T 14-09-2016 AMK01_RS15545 dc18936eb58b4947949113a15c1a134a 417 PANTHER PTHR13734 12 243 2.4E-61 T 14-09-2016 AMK01_RS15545 dc18936eb58b4947949113a15c1a134a 417 Pfam PF01743 Poly A polymerase head domain 30 151 5.5E-26 T 14-09-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 AMK01_RS15545 dc18936eb58b4947949113a15c1a134a 417 SUPERFAMILY SSF81891 150 415 1.57E-46 T 14-09-2016 AMK01_RS15545 dc18936eb58b4947949113a15c1a134a 417 SUPERFAMILY SSF81301 11 148 1.09E-36 T 14-09-2016 AMK01_RS15545 dc18936eb58b4947949113a15c1a134a 417 Gene3D G3DSA:1.10.3090.10 150 383 1.1E-43 T 14-09-2016 AMK01_RS15545 dc18936eb58b4947949113a15c1a134a 417 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 187 238 3.7E-7 T 14-09-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AMK01_RS15545 dc18936eb58b4947949113a15c1a134a 417 Gene3D G3DSA:3.30.460.10 14 147 1.7E-38 T 14-09-2016 AMK01_RS14090 26b50b34544f20e462b82d49c878ade1 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 4.2E-72 T 14-09-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS14090 26b50b34544f20e462b82d49c878ade1 339 PANTHER PTHR21371 1 338 9.7E-179 T 14-09-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS14090 26b50b34544f20e462b82d49c878ade1 339 Gene3D G3DSA:1.10.1040.10 29 326 4.4E-112 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS14090 26b50b34544f20e462b82d49c878ade1 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 1.0E-126 T 14-09-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS14090 26b50b34544f20e462b82d49c878ade1 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 3.0E-66 T 14-09-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS14090 26b50b34544f20e462b82d49c878ade1 339 SUPERFAMILY SSF51735 1 183 3.22E-71 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14090 26b50b34544f20e462b82d49c878ade1 339 SUPERFAMILY SSF48179 184 333 2.04E-71 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS14090 26b50b34544f20e462b82d49c878ade1 339 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 329 45.43 T 14-09-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS01740 8529cd46534bdae05891cc2e1c0b1cd7 81 Pfam PF07704 Rv0623-like transcription factor 6 74 2.5E-9 T 14-09-2016 IPR011660 Rv0623-like transcription factor AMK01_RS08680 c0e0e6eea1a88fc2ecf53813dc91e4e9 419 SUPERFAMILY SSF53850 27 417 4.84E-53 T 14-09-2016 AMK01_RS08680 c0e0e6eea1a88fc2ecf53813dc91e4e9 419 PANTHER PTHR30061:SF22 5 394 1.0E-73 T 14-09-2016 AMK01_RS08680 c0e0e6eea1a88fc2ecf53813dc91e4e9 419 Pfam PF01547 Bacterial extracellular solute-binding protein 60 285 1.5E-21 T 14-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK01_RS08680 c0e0e6eea1a88fc2ecf53813dc91e4e9 419 PANTHER PTHR30061 5 394 1.0E-73 T 14-09-2016 AMK01_RS08680 c0e0e6eea1a88fc2ecf53813dc91e4e9 419 Gene3D G3DSA:3.40.190.10 25 205 6.9E-25 T 14-09-2016 AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 PANTHER PTHR26402 1 219 1.1E-71 T 14-09-2016 AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 Pfam PF00072 Response regulator receiver domain 3 112 5.4E-26 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 2.3E-15 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 Gene3D G3DSA:1.10.10.10 124 219 8.0E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 SMART SM00448 1 112 6.6E-36 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 SUPERFAMILY SSF52172 2 172 1.31E-38 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 PANTHER PTHR26402:SF518 1 219 1.1E-71 T 14-09-2016 AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 SMART SM00862 145 218 1.7E-14 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS18505 5ce74f657fd753b59492e4c14543c669 225 Gene3D G3DSA:3.40.50.2300 2 120 2.0E-37 T 14-09-2016 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 334 419 2.3E-32 T 14-09-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SUPERFAMILY SSF56091 12 328 1.51E-113 T 14-09-2016 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Hamap MF_01588 DNA ligase [ligA]. 14 716 49.309 T 14-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 129 158 - T 14-09-2016 IPR018239 NAD-dependent DNA ligase, active site AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 712 2.6E-223 T 14-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SUPERFAMILY SSF47781 428 628 4.45E-44 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 431 464 3.2E-8 T 14-09-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 PANTHER PTHR23389:SF9 14 573 8.3E-163 T 14-09-2016 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Gene3D G3DSA:1.10.287.610 8 79 1.1E-24 T 14-09-2016 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Gene3D G3DSA:3.30.470.30 133 264 3.9E-52 T 14-09-2016 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SMART SM00532 15 478 9.2E-229 T 14-09-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 343 358 - T 14-09-2016 IPR033136 NAD-dependent DNA ligase, conserved site AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Gene3D G3DSA:3.40.50.10190 641 716 1.3E-23 T 14-09-2016 IPR001357 BRCT domain AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SUPERFAMILY SSF50249 329 422 5.48E-24 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 PANTHER PTHR23389 14 573 8.3E-163 T 14-09-2016 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Gene3D G3DSA:1.10.150.20 465 542 2.2E-16 T 14-09-2016 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 15 330 6.2E-119 T 14-09-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 PIRSF PIRSF001604 8 718 3.6E-218 T 14-09-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Gene3D G3DSA:2.40.50.140 331 415 1.9E-33 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SMART SM00292 642 718 2.5E-10 T 14-09-2016 IPR001357 BRCT domain AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SMART SM00278 520 539 300.0 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SMART SM00278 594 613 8.8 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SMART SM00278 552 571 320.0 T 14-09-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 SUPERFAMILY SSF52113 642 716 1.21E-17 T 14-09-2016 IPR001357 BRCT domain AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 643 716 1.9E-11 T 14-09-2016 IPR001357 BRCT domain AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Gene3D G3DSA:1.10.150.20 544 628 2.0E-26 T 14-09-2016 AMK01_RS14555 22a4d2c32dc38f4d9fa301d900d4e402 718 Pfam PF12826 Helix-hairpin-helix motif 550 623 1.0E-16 T 14-09-2016 AMK01_RS16795 dd5ad20cc0c452fc4f5a4f8560a7f681 261 PIRSF PIRSF030013 1 248 7.2E-131 T 14-09-2016 IPR009381 Trehalose catabolism protein, ThuA, prokaryote AMK01_RS16795 dd5ad20cc0c452fc4f5a4f8560a7f681 261 Gene3D G3DSA:3.40.50.880 2 246 8.6E-95 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS16795 dd5ad20cc0c452fc4f5a4f8560a7f681 261 SUPERFAMILY SSF52317 3 238 2.2E-58 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS16795 dd5ad20cc0c452fc4f5a4f8560a7f681 261 Pfam PF06283 Trehalose utilisation 13 220 1.9E-31 T 14-09-2016 IPR029010 ThuA-like domain AMK01_RS20040 6924494c71bae7129b8a22570b0fef29 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 112 2.7E-15 T 14-09-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 AMK01_RS20040 6924494c71bae7129b8a22570b0fef29 126 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 120 2.0E-28 T 14-09-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 AMK01_RS20040 6924494c71bae7129b8a22570b0fef29 126 SUPERFAMILY SSF81343 11 122 4.58E-29 T 14-09-2016 AMK01_RS20040 6924494c71bae7129b8a22570b0fef29 126 Gene3D G3DSA:1.20.1300.10 9 121 3.1E-29 T 14-09-2016 AMK01_RS11990 83cc087844f6402ee2919c222e6a9af2 186 Gene3D G3DSA:3.40.50.850 2 178 4.9E-44 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS11990 83cc087844f6402ee2919c222e6a9af2 186 Pfam PF00857 Isochorismatase family 4 156 4.7E-34 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS11990 83cc087844f6402ee2919c222e6a9af2 186 PANTHER PTHR11080 1 148 1.8E-33 T 14-09-2016 AMK01_RS11990 83cc087844f6402ee2919c222e6a9af2 186 SUPERFAMILY SSF52499 2 165 1.13E-43 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 Pfam PF13229 Right handed beta helix region 156 331 1.3E-19 T 14-09-2016 AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 Gene3D G3DSA:2.160.20.10 34 372 6.3E-31 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SMART SM00710 140 162 0.3 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SMART SM00710 163 188 360.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SMART SM00710 90 112 830.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SMART SM00710 238 264 1200.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SMART SM00710 298 320 2500.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SMART SM00710 268 289 140.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SMART SM00710 216 237 130.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SMART SM00710 113 139 9800.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS13385 9889e06730315f55b43fa9cf5d56046f 498 SUPERFAMILY SSF51126 21 357 1.87E-46 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS19405 f7f0289a05822555183476acf50d0650 326 PRINTS PR00069 Aldo-keto reductase signature 113 131 8.4E-7 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS19405 f7f0289a05822555183476acf50d0650 326 PRINTS PR00069 Aldo-keto reductase signature 47 71 8.4E-7 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS19405 f7f0289a05822555183476acf50d0650 326 PRINTS PR00069 Aldo-keto reductase signature 144 161 8.4E-7 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS19405 f7f0289a05822555183476acf50d0650 326 Gene3D G3DSA:3.20.20.100 9 318 1.0E-108 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS19405 f7f0289a05822555183476acf50d0650 326 PANTHER PTHR11732 1 219 2.2E-139 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS19405 f7f0289a05822555183476acf50d0650 326 PANTHER PTHR11732 239 315 2.2E-139 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS19405 f7f0289a05822555183476acf50d0650 326 SUPERFAMILY SSF51430 1 320 1.7E-106 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS19405 f7f0289a05822555183476acf50d0650 326 Pfam PF00248 Aldo/keto reductase family 15 315 4.4E-77 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 Gene3D G3DSA:3.40.140.20 254 371 7.4E-48 T 14-09-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 SUPERFAMILY SSF52335 16 207 2.35E-65 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 Pfam PF01808 AICARFT/IMPCHase bienzyme 148 461 3.2E-116 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 Pfam PF02142 MGS-like domain 28 141 1.1E-24 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 PANTHER PTHR11692:SF2 14 538 5.5E-289 T 14-09-2016 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 PANTHER PTHR11692 14 538 5.5E-289 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 17 538 5.9E-205 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 SUPERFAMILY SSF53927 223 538 2.01E-125 T 14-09-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 SMART SM00798 147 463 3.5E-203 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 PIRSF PIRSF000414 11 538 9.8E-204 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 SMART SM00851 28 142 4.5E-51 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 16 538 42.93 T 14-09-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 Gene3D G3DSA:3.40.140.20 379 528 6.0E-55 T 14-09-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK01_RS21105 ce331bf1ff7ca4c0cf995e1fec684f4a 538 Gene3D G3DSA:3.40.50.1380 15 200 3.8E-78 T 14-09-2016 IPR011607 Methylglyoxal synthase-like domain AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 Gene3D G3DSA:3.90.180.10 1 150 5.9E-42 T 14-09-2016 IPR011032 GroES-like AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 Pfam PF13602 Zinc-binding dehydrogenase 191 307 1.0E-10 T 14-09-2016 AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 7.9E-7 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 SUPERFAMILY SSF50129 1 150 7.91E-36 T 14-09-2016 IPR011032 GroES-like AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 PANTHER PTHR11695:SF294 15 309 1.0E-67 T 14-09-2016 AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 Gene3D G3DSA:3.40.50.720 151 235 2.9E-11 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 PANTHER PTHR11695 15 309 1.0E-67 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 SMART SM00829 10 307 1.9E-13 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS13630 bad5343bc701b4d8247f00d1c15fa045 309 SUPERFAMILY SSF51735 117 279 9.7E-27 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16790 9c65cfc3e9feebbe0a31ef007bc10552 347 SUPERFAMILY SSF51735 2 152 5.3E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16790 9c65cfc3e9feebbe0a31ef007bc10552 347 PANTHER PTHR22604:SF123 1 347 7.2E-57 T 14-09-2016 AMK01_RS16790 9c65cfc3e9feebbe0a31ef007bc10552 347 SUPERFAMILY SSF55347 128 326 3.05E-32 T 14-09-2016 AMK01_RS16790 9c65cfc3e9feebbe0a31ef007bc10552 347 Gene3D G3DSA:3.30.360.10 142 346 8.4E-30 T 14-09-2016 AMK01_RS16790 9c65cfc3e9feebbe0a31ef007bc10552 347 Gene3D G3DSA:3.40.50.720 1 141 9.0E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16790 9c65cfc3e9feebbe0a31ef007bc10552 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 260 1.8E-7 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS16790 9c65cfc3e9feebbe0a31ef007bc10552 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 2.7E-20 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS16790 9c65cfc3e9feebbe0a31ef007bc10552 347 PANTHER PTHR22604 1 347 7.2E-57 T 14-09-2016 AMK01_RS13780 37a56e89744aabf16ae1ff81ebf3def9 144 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 5 135 7.9E-30 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS13780 37a56e89744aabf16ae1ff81ebf3def9 144 SUPERFAMILY SSF52121 2 139 1.7E-38 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS13780 37a56e89744aabf16ae1ff81ebf3def9 144 Gene3D G3DSA:3.40.50.960 3 142 6.5E-39 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS13780 37a56e89744aabf16ae1ff81ebf3def9 144 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 1 142 19.193 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS13780 37a56e89744aabf16ae1ff81ebf3def9 144 PANTHER PTHR21058 5 144 1.1E-22 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 Gene3D G3DSA:1.10.10.10 25 93 3.6E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 SMART SM00895 101 229 2.2E-13 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 Gene3D G3DSA:1.20.120.530 95 239 7.4E-28 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 PANTHER PTHR11751:SF436 32 117 1.9E-16 T 14-09-2016 AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 31 91 5.0E-13 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 SMART SM00345 33 91 3.8E-7 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 PANTHER PTHR11751 32 117 1.9E-16 T 14-09-2016 AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 SUPERFAMILY SSF46785 28 95 2.3E-14 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 SUPERFAMILY SSF48008 98 237 1.67E-18 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS11765 2946f1d4e1ca2c09d3c01dc37df79b6d 244 Pfam PF07729 FCD domain 102 229 1.0E-18 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS00060 9b42061178413b0dc6e1d3ea11bab7f8 125 Gene3D G3DSA:1.10.260.40 4 115 1.4E-17 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00060 9b42061178413b0dc6e1d3ea11bab7f8 125 PANTHER PTHR10245 4 62 6.3E-15 T 14-09-2016 AMK01_RS00060 9b42061178413b0dc6e1d3ea11bab7f8 125 SMART SM00530 7 63 9.2E-13 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS00060 9b42061178413b0dc6e1d3ea11bab7f8 125 SUPERFAMILY SSF47413 2 58 3.22E-15 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00060 9b42061178413b0dc6e1d3ea11bab7f8 125 Pfam PF13560 Helix-turn-helix domain 4 58 4.7E-13 T 14-09-2016 AMK01_RS12060 4815a8026c4224c0b0bcb44a347b1c80 177 Pfam PF00075 RNase H 24 168 6.5E-27 T 14-09-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMK01_RS12060 4815a8026c4224c0b0bcb44a347b1c80 177 PANTHER PTHR10642 24 167 8.2E-22 T 14-09-2016 AMK01_RS12060 4815a8026c4224c0b0bcb44a347b1c80 177 Gene3D G3DSA:3.30.420.10 23 170 1.6E-36 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS12060 4815a8026c4224c0b0bcb44a347b1c80 177 SUPERFAMILY SSF53098 24 171 6.96E-32 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS01605 4665e9d2091dd85bc9fc4eccc666976d 116 SUPERFAMILY SSF52833 3 114 2.6E-36 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01605 4665e9d2091dd85bc9fc4eccc666976d 116 Gene3D G3DSA:3.40.30.10 3 114 7.3E-44 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01605 4665e9d2091dd85bc9fc4eccc666976d 116 Pfam PF03960 ArsC family 6 112 4.3E-19 T 14-09-2016 IPR006660 Arsenate reductase-like AMK01_RS01605 4665e9d2091dd85bc9fc4eccc666976d 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 111 2.8E-32 T 14-09-2016 IPR006504 Transcriptional regulator Spx/MgsR AMK01_RS01605 4665e9d2091dd85bc9fc4eccc666976d 116 PANTHER PTHR30041 1 114 6.0E-44 T 14-09-2016 AMK01_RS01605 4665e9d2091dd85bc9fc4eccc666976d 116 PANTHER PTHR30041:SF3 1 114 6.0E-44 T 14-09-2016 AMK01_RS08050 d208bb1cb2f3d8a3be4eef609e583eaa 133 Pfam PF07883 Cupin domain 42 103 4.6E-10 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS08050 d208bb1cb2f3d8a3be4eef609e583eaa 133 PANTHER PTHR33570:SF5 1 130 6.0E-54 T 14-09-2016 AMK01_RS08050 d208bb1cb2f3d8a3be4eef609e583eaa 133 SUPERFAMILY SSF51182 8 130 2.8E-32 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS08050 d208bb1cb2f3d8a3be4eef609e583eaa 133 Gene3D G3DSA:2.60.120.10 13 130 3.0E-33 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS08050 d208bb1cb2f3d8a3be4eef609e583eaa 133 PANTHER PTHR33570 1 130 6.0E-54 T 14-09-2016 AMK01_RS07405 a37493e994c4fac64fc1926e6a1a89a2 405 PANTHER PTHR30518:SF2 34 377 5.2E-87 T 14-09-2016 AMK01_RS07405 a37493e994c4fac64fc1926e6a1a89a2 405 Gene3D G3DSA:3.30.160.60 339 374 1.8E-18 T 14-09-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AMK01_RS07405 a37493e994c4fac64fc1926e6a1a89a2 405 Pfam PF02618 YceG-like family 89 364 2.2E-83 T 14-09-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AMK01_RS07405 a37493e994c4fac64fc1926e6a1a89a2 405 PANTHER PTHR30518 34 377 5.2E-87 T 14-09-2016 AMK01_RS07405 a37493e994c4fac64fc1926e6a1a89a2 405 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 190 367 4.4E-61 T 14-09-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AMK01_RS08685 499b2e3d9eba8109a0b7e98a4e28d42d 317 PANTHER PTHR30193:SF29 3 317 2.3E-115 T 14-09-2016 AMK01_RS08685 499b2e3d9eba8109a0b7e98a4e28d42d 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 310 1.8E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08685 499b2e3d9eba8109a0b7e98a4e28d42d 317 PANTHER PTHR30193 3 317 2.3E-115 T 14-09-2016 AMK01_RS08685 499b2e3d9eba8109a0b7e98a4e28d42d 317 SUPERFAMILY SSF161098 87 303 5.76E-48 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08685 499b2e3d9eba8109a0b7e98a4e28d42d 317 Gene3D G3DSA:1.10.3720.10 89 308 2.6E-55 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS04810 28748f322e88a7c50b34893cc0fd1428 337 PANTHER PTHR11101 1 329 1.5E-106 T 14-09-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 AMK01_RS04810 28748f322e88a7c50b34893cc0fd1428 337 Pfam PF01384 Phosphate transporter family 24 166 7.4E-40 T 14-09-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 AMK01_RS04810 28748f322e88a7c50b34893cc0fd1428 337 Pfam PF01384 Phosphate transporter family 171 323 4.0E-55 T 14-09-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 Gene3D G3DSA:1.10.10.10 13 164 1.6E-40 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 110 126 2.0E-14 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 90 2.0E-14 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 106 2.0E-14 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 140 160 2.0E-14 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 SMART SM00347 47 150 8.2E-27 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 PANTHER PTHR33164:SF4 1 165 7.8E-38 T 14-09-2016 AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 PANTHER PTHR33164 1 165 7.8E-38 T 14-09-2016 AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 SUPERFAMILY SSF46785 14 163 2.56E-36 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 89 123 - T 14-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK01_RS01575 3df82485a12895563653ba57829c4d1b 165 Pfam PF01047 MarR family 54 115 3.3E-14 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS30005 8d69b65d67ce09cced6c1158edf738f7 165 Gene3D G3DSA:3.40.50.720 78 164 3.9E-25 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS30005 8d69b65d67ce09cced6c1158edf738f7 165 SUPERFAMILY SSF51735 48 164 2.12E-30 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS30005 8d69b65d67ce09cced6c1158edf738f7 165 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 2 41 6.4E-8 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS30005 8d69b65d67ce09cced6c1158edf738f7 165 PANTHER PTHR11695:SF280 2 164 1.3E-66 T 14-09-2016 AMK01_RS30005 8d69b65d67ce09cced6c1158edf738f7 165 PANTHER PTHR11695 2 164 1.3E-66 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS30005 8d69b65d67ce09cced6c1158edf738f7 165 Pfam PF00107 Zinc-binding dehydrogenase 85 164 1.0E-18 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS30005 8d69b65d67ce09cced6c1158edf738f7 165 SUPERFAMILY SSF50129 2 70 5.09E-17 T 14-09-2016 IPR011032 GroES-like AMK01_RS30005 8d69b65d67ce09cced6c1158edf738f7 165 Gene3D G3DSA:3.90.180.10 2 77 1.1E-27 T 14-09-2016 IPR011032 GroES-like AMK01_RS20360 86886c9c1cc5871d2552164b23c206e5 272 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 43 110 5.7E-13 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS20360 86886c9c1cc5871d2552164b23c206e5 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 267 1.7E-20 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20360 86886c9c1cc5871d2552164b23c206e5 272 Gene3D G3DSA:1.10.3720.10 43 267 5.6E-48 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20360 86886c9c1cc5871d2552164b23c206e5 272 PANTHER PTHR30614 136 272 2.0E-70 T 14-09-2016 AMK01_RS20360 86886c9c1cc5871d2552164b23c206e5 272 PANTHER PTHR30614 1 120 2.0E-70 T 14-09-2016 AMK01_RS20360 86886c9c1cc5871d2552164b23c206e5 272 SUPERFAMILY SSF161098 45 252 2.88E-40 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14420 bc9f706b9f5f2456ec2e7f1c1360ee58 135 Gene3D G3DSA:3.40.1490.10 1 133 2.7E-56 T 14-09-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 AMK01_RS14420 bc9f706b9f5f2456ec2e7f1c1360ee58 135 SUPERFAMILY SSF102462 1 133 9.42E-47 T 14-09-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 AMK01_RS14420 bc9f706b9f5f2456ec2e7f1c1360ee58 135 Pfam PF09391 Protein of unknown function (DUF2000) 4 133 7.4E-43 T 14-09-2016 IPR018988 Protein of unknown function DUF2000 AMK01_RS03225 07615f1ae5587fea20289c879d5f0f10 291 SUPERFAMILY SSF161098 82 270 1.57E-25 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03225 07615f1ae5587fea20289c879d5f0f10 291 PANTHER PTHR30465:SF2 4 290 7.9E-95 T 14-09-2016 AMK01_RS03225 07615f1ae5587fea20289c879d5f0f10 291 Gene3D G3DSA:1.10.3720.10 79 286 7.6E-24 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03225 07615f1ae5587fea20289c879d5f0f10 291 PANTHER PTHR30465 4 290 7.9E-95 T 14-09-2016 AMK01_RS03225 07615f1ae5587fea20289c879d5f0f10 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 288 4.4E-30 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 PANTHER PTHR11751 20 109 6.9E-23 T 14-09-2016 AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 SUPERFAMILY SSF46785 17 101 2.7E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 SMART SM00345 25 83 5.2E-15 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 SMART SM00895 93 222 5.0E-17 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 Pfam PF07729 FCD domain 94 221 1.3E-19 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 SUPERFAMILY SSF48008 92 228 1.94E-24 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 81 8.9E-16 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 Gene3D G3DSA:1.10.10.10 10 84 4.0E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 1.8E-7 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 1.8E-7 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 43 54 4.5E-6 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 54 73 4.5E-6 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS10980 3f070231f47b1a98ab055678f82753ee 241 Gene3D G3DSA:1.20.120.530 87 230 4.3E-23 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.736 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 SUPERFAMILY SSF50249 2 123 3.0E-52 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.2E-60 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.2E-60 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.2E-60 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.2E-60 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.2E-60 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.2E-60 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 PIRSF PIRSF002133 1 123 3.1E-54 T 14-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 Gene3D G3DSA:2.40.50.140 1 123 1.3E-65 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 3.6E-68 T 14-09-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 PANTHER PTHR11652 1 116 4.7E-71 T 14-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08425 f8132dd5034e73797f55003fd1968709 123 Pfam PF00164 Ribosomal protein S12/S23 5 123 5.0E-42 T 14-09-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 PANTHER PTHR11271 1 355 1.7E-42 T 14-09-2016 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 PIRSF PIRSF038971 1 376 4.3E-103 T 14-09-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 Gene3D G3DSA:2.30.40.10 290 381 2.8E-10 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 PANTHER PTHR11271:SF43 1 355 1.7E-42 T 14-09-2016 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 Gene3D G3DSA:2.30.40.10 3 111 5.4E-11 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 Pfam PF01979 Amidohydrolase family 282 361 2.7E-5 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 SUPERFAMILY SSF51338 3 50 7.52E-14 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 SUPERFAMILY SSF51338 344 385 7.52E-14 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 376 4.2E-143 T 14-09-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 SUPERFAMILY SSF51556 50 174 8.26E-7 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS07570 f9d16b2cfd8fdc57d03717a890dbd0ea 389 SUPERFAMILY SSF51556 213 340 8.26E-7 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS19540 69ce1080bb6db918e26350f2901619df 180 PANTHER PTHR22573:SF56 10 175 1.7E-52 T 14-09-2016 AMK01_RS19540 69ce1080bb6db918e26350f2901619df 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 13 176 9.7E-50 T 14-09-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 AMK01_RS19540 69ce1080bb6db918e26350f2901619df 180 SUPERFAMILY SSF53271 11 178 7.08E-47 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS19540 69ce1080bb6db918e26350f2901619df 180 PANTHER PTHR22573 10 175 1.7E-52 T 14-09-2016 AMK01_RS19540 69ce1080bb6db918e26350f2901619df 180 Gene3D G3DSA:3.40.50.2020 5 178 7.8E-62 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS19540 69ce1080bb6db918e26350f2901619df 180 Pfam PF00156 Phosphoribosyl transferase domain 16 162 2.2E-25 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK01_RS12695 ddf3f2ceaba767847fdf9baaa3326c67 326 Pfam PF03186 CobD/Cbib protein 10 305 2.5E-92 T 14-09-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK01_RS12695 ddf3f2ceaba767847fdf9baaa3326c67 326 PANTHER PTHR34308 1 323 1.2E-82 T 14-09-2016 AMK01_RS12695 ddf3f2ceaba767847fdf9baaa3326c67 326 PANTHER PTHR34308:SF1 1 323 1.2E-82 T 14-09-2016 AMK01_RS12695 ddf3f2ceaba767847fdf9baaa3326c67 326 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 6 288 7.8E-61 T 14-09-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK01_RS12695 ddf3f2ceaba767847fdf9baaa3326c67 326 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 326 95.406 T 14-09-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PIRSF PIRSF000774 1 510 5.7E-140 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 488 495 - T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PANTHER PTHR32248 2 124 1.2E-135 T 14-09-2016 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PANTHER PTHR32248 144 510 1.2E-135 T 14-09-2016 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 Pfam PF04963 Sigma-54 factor, core binding domain 151 337 7.2E-50 T 14-09-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 396 415 - T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 Pfam PF04552 Sigma-54, DNA binding domain 349 508 1.3E-69 T 14-09-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PRINTS PR00045 Sigma-54 factor signature 223 240 2.2E-32 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PRINTS PR00045 Sigma-54 factor signature 483 501 2.2E-32 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PRINTS PR00045 Sigma-54 factor signature 408 420 2.2E-32 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PRINTS PR00045 Sigma-54 factor signature 424 435 2.2E-32 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PANTHER PTHR32248:SF4 2 124 1.2E-135 T 14-09-2016 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 PANTHER PTHR32248:SF4 144 510 1.2E-135 T 14-09-2016 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 50 5.9E-17 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02220 3c8d507e6958b7ccc418bb8d85314bfc 519 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 507 1.8E-126 T 14-09-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AMK01_RS05415 67cb7b175ff332c1fc9927d65dd2a566 234 Gene3D G3DSA:3.40.1050.10 2 204 2.0E-69 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05415 67cb7b175ff332c1fc9927d65dd2a566 234 Pfam PF00484 Carbonic anhydrase 35 192 3.7E-49 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05415 67cb7b175ff332c1fc9927d65dd2a566 234 SMART SM00947 28 196 5.9E-66 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05415 67cb7b175ff332c1fc9927d65dd2a566 234 SUPERFAMILY SSF53056 2 201 1.57E-62 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05415 67cb7b175ff332c1fc9927d65dd2a566 234 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 40 47 - T 14-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05415 67cb7b175ff332c1fc9927d65dd2a566 234 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 83 103 - T 14-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05415 67cb7b175ff332c1fc9927d65dd2a566 234 PANTHER PTHR11002 1 212 2.4E-66 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS05415 67cb7b175ff332c1fc9927d65dd2a566 234 PANTHER PTHR11002:SF13 1 212 2.4E-66 T 14-09-2016 AMK01_RS07210 c39b0b078de0fd48f2ffcd69897293cf 104 PANTHER PTHR33154 5 95 6.8E-25 T 14-09-2016 AMK01_RS07210 c39b0b078de0fd48f2ffcd69897293cf 104 SMART SM00418 5 83 2.3E-20 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS07210 c39b0b078de0fd48f2ffcd69897293cf 104 Gene3D G3DSA:1.10.10.10 5 103 1.8E-31 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07210 c39b0b078de0fd48f2ffcd69897293cf 104 Pfam PF12840 Helix-turn-helix domain 5 63 2.1E-14 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07210 c39b0b078de0fd48f2ffcd69897293cf 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 4.4E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS07210 c39b0b078de0fd48f2ffcd69897293cf 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 4.4E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS07210 c39b0b078de0fd48f2ffcd69897293cf 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 4.4E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS07210 c39b0b078de0fd48f2ffcd69897293cf 104 SUPERFAMILY SSF46785 5 95 1.34E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10815 4b98a14ef7e67c075a07ec75794f1f14 170 Gene3D G3DSA:2.40.50.140 2 170 1.6E-50 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS10815 4b98a14ef7e67c075a07ec75794f1f14 170 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 35.988 T 14-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMK01_RS10815 4b98a14ef7e67c075a07ec75794f1f14 170 Pfam PF00436 Single-strand binding protein family 5 105 8.4E-40 T 14-09-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 AMK01_RS10815 4b98a14ef7e67c075a07ec75794f1f14 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 170 3.3E-49 T 14-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMK01_RS10815 4b98a14ef7e67c075a07ec75794f1f14 170 SUPERFAMILY SSF50249 4 170 3.77E-52 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS10815 4b98a14ef7e67c075a07ec75794f1f14 170 PANTHER PTHR10302 138 163 8.6E-49 T 14-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMK01_RS10815 4b98a14ef7e67c075a07ec75794f1f14 170 PANTHER PTHR10302 1 122 8.6E-49 T 14-09-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMK01_RS17610 e8bbae2888fac8533635c62edcef2cd9 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.3E-12 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS17610 e8bbae2888fac8533635c62edcef2cd9 200 SUPERFAMILY SSF46689 2 82 6.67E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS17610 e8bbae2888fac8533635c62edcef2cd9 200 SUPERFAMILY SSF48498 85 196 4.34E-5 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS17610 e8bbae2888fac8533635c62edcef2cd9 200 PANTHER PTHR30055 1 188 6.8E-21 T 14-09-2016 AMK01_RS17610 e8bbae2888fac8533635c62edcef2cd9 200 PANTHER PTHR30055:SF60 1 188 6.8E-21 T 14-09-2016 AMK01_RS17610 e8bbae2888fac8533635c62edcef2cd9 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-5 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS17610 e8bbae2888fac8533635c62edcef2cd9 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.3E-5 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS17610 e8bbae2888fac8533635c62edcef2cd9 200 Gene3D G3DSA:1.10.357.10 5 180 1.2E-30 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 SUPERFAMILY SSF90123 19 344 1.2E-54 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 Gene3D G3DSA:3.40.50.300 360 591 4.2E-83 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 PANTHER PTHR24221 14 605 0.0 T 14-09-2016 AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 Pfam PF00664 ABC transporter transmembrane region 42 315 2.1E-30 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 SMART SM00382 386 572 1.2E-16 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 Gene3D G3DSA:1.20.1560.10 19 340 1.1E-55 T 14-09-2016 AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 Pfam PF00005 ABC transporter 377 526 4.2E-36 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 SUPERFAMILY SSF52540 353 596 1.22E-91 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS07225 591f054da2ca2079e993c878d80f7a95 625 PANTHER PTHR24221:SF250 14 605 0.0 T 14-09-2016 AMK01_RS11685 f389f6d86f1af4348ff4ea1dc34afeb5 223 SUPERFAMILY SSF52317 1 219 3.44E-71 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS11685 f389f6d86f1af4348ff4ea1dc34afeb5 223 PANTHER PTHR10099 1 219 1.6E-100 T 14-09-2016 AMK01_RS11685 f389f6d86f1af4348ff4ea1dc34afeb5 223 PIRSF PIRSF001586 1 223 3.2E-85 T 14-09-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11685 f389f6d86f1af4348ff4ea1dc34afeb5 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 203 2.0E-37 T 14-09-2016 AMK01_RS11685 f389f6d86f1af4348ff4ea1dc34afeb5 223 Gene3D G3DSA:3.40.50.880 1 219 8.6E-36 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS11685 f389f6d86f1af4348ff4ea1dc34afeb5 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 219 6.3E-94 T 14-09-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11685 f389f6d86f1af4348ff4ea1dc34afeb5 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 219 41.818 T 14-09-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11685 f389f6d86f1af4348ff4ea1dc34afeb5 223 SMART SM01211 1 221 9.9E-120 T 14-09-2016 AMK01_RS00010 a561d284fd5942c5e3ea786572c4d652 273 PANTHER PTHR31756:SF3 3 268 8.6E-92 T 14-09-2016 AMK01_RS00010 a561d284fd5942c5e3ea786572c4d652 273 PANTHER PTHR31756 3 268 8.6E-92 T 14-09-2016 AMK01_RS00010 a561d284fd5942c5e3ea786572c4d652 273 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 8 272 54.8 T 14-09-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein AMK01_RS00010 a561d284fd5942c5e3ea786572c4d652 273 Pfam PF03618 Kinase/pyrophosphorylase 10 265 6.6E-87 T 14-09-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AMK01_RS20055 f3264325c90e7cb3d9ed5569171bbedd 217 SUPERFAMILY SSF53335 33 183 7.32E-22 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS20055 f3264325c90e7cb3d9ed5569171bbedd 217 PANTHER PTHR18895:SF3 21 187 1.5E-27 T 14-09-2016 AMK01_RS20055 f3264325c90e7cb3d9ed5569171bbedd 217 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 75 144 2.1E-9 T 14-09-2016 AMK01_RS20055 f3264325c90e7cb3d9ed5569171bbedd 217 PANTHER PTHR18895 21 187 1.5E-27 T 14-09-2016 AMK01_RS20055 f3264325c90e7cb3d9ed5569171bbedd 217 Gene3D G3DSA:3.40.50.150 38 192 5.0E-33 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS10350 504521007ac17312f4943fe350f5de57 203 PANTHER PTHR30582:SF1 72 201 2.6E-47 T 14-09-2016 AMK01_RS10350 504521007ac17312f4943fe350f5de57 203 SUPERFAMILY SSF141523 69 202 3.66E-30 T 14-09-2016 AMK01_RS10350 504521007ac17312f4943fe350f5de57 203 Gene3D G3DSA:2.40.440.10 71 202 6.4E-33 T 14-09-2016 AMK01_RS10350 504521007ac17312f4943fe350f5de57 203 Pfam PF03734 L,D-transpeptidase catalytic domain 74 201 1.1E-15 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS10350 504521007ac17312f4943fe350f5de57 203 PANTHER PTHR30582 72 201 2.6E-47 T 14-09-2016 AMK01_RS03715 1cc68e3efaa069c7ddd2359c5de55710 606 SUPERFAMILY SSF143975 4 421 2.48E-141 T 14-09-2016 AMK01_RS03715 1cc68e3efaa069c7ddd2359c5de55710 606 SUPERFAMILY SSF52016 422 604 3.61E-61 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK01_RS03715 1cc68e3efaa069c7ddd2359c5de55710 606 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 508 519 - T 14-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS03715 1cc68e3efaa069c7ddd2359c5de55710 606 Pfam PF00920 Dehydratase family 68 601 8.6E-162 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS03715 1cc68e3efaa069c7ddd2359c5de55710 606 PANTHER PTHR21000:SF9 4 604 0.0 T 14-09-2016 AMK01_RS03715 1cc68e3efaa069c7ddd2359c5de55710 606 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 14-09-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS03715 1cc68e3efaa069c7ddd2359c5de55710 606 PANTHER PTHR21000 4 604 0.0 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS03715 1cc68e3efaa069c7ddd2359c5de55710 606 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 604 0.0 T 14-09-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 AMK01_RS09320 c04dbeda79b9d853356af8cb9fee956c 591 Pfam PF04055 Radical SAM superfamily 211 370 2.0E-16 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS09320 c04dbeda79b9d853356af8cb9fee956c 591 SMART SM00729 204 419 1.1E-16 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK01_RS09320 c04dbeda79b9d853356af8cb9fee956c 591 Gene3D G3DSA:3.80.30.20 208 401 5.9E-30 T 14-09-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK01_RS09320 c04dbeda79b9d853356af8cb9fee956c 591 PANTHER PTHR11918 64 396 8.2E-39 T 14-09-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMK01_RS09320 c04dbeda79b9d853356af8cb9fee956c 591 PANTHER PTHR11918:SF64 64 396 8.2E-39 T 14-09-2016 AMK01_RS09320 c04dbeda79b9d853356af8cb9fee956c 591 SUPERFAMILY SSF102114 172 412 2.75E-29 T 14-09-2016 AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 PANTHER PTHR26402:SF50 4 225 6.8E-79 T 14-09-2016 AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 Gene3D G3DSA:1.10.10.10 127 225 4.1E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.4E-21 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 SMART SM00448 4 116 1.2E-35 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 PANTHER PTHR26402 4 225 6.8E-79 T 14-09-2016 AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 Gene3D G3DSA:3.40.50.2300 3 126 2.6E-34 T 14-09-2016 AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 Pfam PF00072 Response regulator receiver domain 6 117 2.3E-24 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 SMART SM00862 150 225 3.9E-19 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS20380 61c11c94140ea951a427e32a8ce492f4 227 SUPERFAMILY SSF52172 2 184 3.27E-37 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS15465 c2066577586c2540f8fafcec39ffe94a 163 Pfam PF01575 MaoC like domain 24 121 2.4E-13 T 14-09-2016 IPR002539 MaoC-like domain AMK01_RS15465 c2066577586c2540f8fafcec39ffe94a 163 Gene3D G3DSA:3.10.129.10 4 150 1.3E-37 T 14-09-2016 IPR029069 HotDog domain AMK01_RS15465 c2066577586c2540f8fafcec39ffe94a 163 PANTHER PTHR13078 6 150 1.2E-37 T 14-09-2016 AMK01_RS15465 c2066577586c2540f8fafcec39ffe94a 163 SUPERFAMILY SSF54637 5 151 2.35E-34 T 14-09-2016 IPR029069 HotDog domain AMK01_RS11775 4b099b40676d05f009dadd0aa9fba2ff 260 SUPERFAMILY SSF56529 3 260 1.53E-69 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS11775 4b099b40676d05f009dadd0aa9fba2ff 260 PANTHER PTHR30143 1 260 1.1E-80 T 14-09-2016 AMK01_RS11775 4b099b40676d05f009dadd0aa9fba2ff 260 Gene3D G3DSA:3.90.850.10 1 260 5.7E-76 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS11775 4b099b40676d05f009dadd0aa9fba2ff 260 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 260 3.3E-107 T 14-09-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 AMK01_RS07195 7e0b035959364239d252a19debc94b45 254 SUPERFAMILY SSF143081 2 232 7.33E-68 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS07195 7e0b035959364239d252a19debc94b45 254 Gene3D G3DSA:3.90.1680.10 1 232 7.0E-64 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS07195 7e0b035959364239d252a19debc94b45 254 Pfam PF02586 SOS response associated peptidase (SRAP) 1 221 8.5E-59 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS07195 7e0b035959364239d252a19debc94b45 254 PANTHER PTHR13604 2 232 4.1E-61 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS22560 c4a086d2d48a286523cb2a9c12f11ed7 77 SUPERFAMILY SSF56801 1 77 1.57E-13 T 14-09-2016 AMK01_RS22560 c4a086d2d48a286523cb2a9c12f11ed7 77 Pfam PF00501 AMP-binding enzyme 1 77 6.5E-12 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS22560 c4a086d2d48a286523cb2a9c12f11ed7 77 Gene3D G3DSA:2.30.38.10 2 77 7.8E-13 T 14-09-2016 AMK01_RS00890 7286617ff411bc46fae1d94143fcdc46 228 SMART SM00287 23 85 2.7E-6 T 14-09-2016 IPR003646 SH3-like domain, bacterial-type AMK01_RS00890 7286617ff411bc46fae1d94143fcdc46 228 Pfam PF08239 Bacterial SH3 domain 31 82 7.4E-12 T 14-09-2016 IPR003646 SH3-like domain, bacterial-type AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 Pfam PF00700 Bacterial flagellin C-terminal helical region 478 561 4.8E-10 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 135 1.4E-23 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 SUPERFAMILY SSF64518 321 389 1.7E-52 T 14-09-2016 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 SUPERFAMILY SSF64518 432 562 1.7E-52 T 14-09-2016 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 SUPERFAMILY SSF64518 1 269 1.7E-52 T 14-09-2016 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 Gene3D G3DSA:1.20.1330.10 463 502 4.6E-8 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 Gene3D G3DSA:1.20.1330.10 267 268 4.6E-8 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 Gene3D G3DSA:1.20.1330.10 53 136 4.6E-8 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 PRINTS PR00207 Flagellin signature 107 130 6.6E-5 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS16205 01aeed0832e402ac9aa585f04d93a1e5 562 PRINTS PR00207 Flagellin signature 36 53 6.6E-5 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 Gene3D G3DSA:3.30.565.10 206 365 4.4E-34 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 PANTHER PTHR24423 299 364 3.5E-88 T 14-09-2016 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 PANTHER PTHR24423 19 279 3.5E-88 T 14-09-2016 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 PANTHER PTHR24423:SF520 19 279 3.5E-88 T 14-09-2016 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 SMART SM00387 246 367 1.3E-29 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 365 1.5E-15 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 Gene3D G3DSA:1.10.287.130 138 195 6.5E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 200 1.6E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 SUPERFAMILY SSF47384 136 200 5.69E-10 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 PANTHER PTHR24423:SF520 299 364 3.5E-88 T 14-09-2016 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 SUPERFAMILY SSF55785 19 120 1.47E-6 T 14-09-2016 IPR000014 PAS domain AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 SMART SM00388 141 205 1.7E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 327 2.8E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 346 2.8E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 364 2.8E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 2.8E-14 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 Pfam PF00989 PAS fold 19 121 6.0E-8 T 14-09-2016 IPR013767 PAS fold GO:0006355 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 Gene3D G3DSA:3.30.450.20 18 121 6.8E-14 T 14-09-2016 AMK01_RS09865 bb4189c6404ae990a8853abcddf0d7b9 384 SUPERFAMILY SSF55874 209 364 4.71E-33 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00760 b65e14865280e9325f27812473880869 412 SUPERFAMILY SSF53955 20 340 3.0E-86 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS00760 b65e14865280e9325f27812473880869 412 SUPERFAMILY SSF47090 355 406 9.42E-8 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS00760 b65e14865280e9325f27812473880869 412 PANTHER PTHR30163 1 411 2.4E-111 T 14-09-2016 IPR011757 Lytic transglycosylase MltB AMK01_RS00760 b65e14865280e9325f27812473880869 412 Gene3D G3DSA:1.10.530.10 223 340 6.1E-50 T 14-09-2016 AMK01_RS00760 b65e14865280e9325f27812473880869 412 Gene3D G3DSA:1.10.530.10 100 142 6.1E-50 T 14-09-2016 AMK01_RS00760 b65e14865280e9325f27812473880869 412 PANTHER PTHR30163:SF2 1 411 2.4E-111 T 14-09-2016 AMK01_RS00760 b65e14865280e9325f27812473880869 412 Pfam PF01471 Putative peptidoglycan binding domain 357 400 2.5E-6 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS00760 b65e14865280e9325f27812473880869 412 Gene3D G3DSA:1.10.101.10 356 400 3.4E-7 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS00760 b65e14865280e9325f27812473880869 412 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 30 338 2.3E-106 T 14-09-2016 IPR011970 Lytic murein transglycosylase AMK01_RS00760 b65e14865280e9325f27812473880869 412 Pfam PF13406 Transglycosylase SLT domain 30 335 9.2E-96 T 14-09-2016 IPR031304 Transglycosylase SLT domain 2 AMK01_RS06170 2388b1ae63954b4fd7f655e805618ea1 205 SUPERFAMILY SSF48498 89 199 4.13E-19 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS06170 2388b1ae63954b4fd7f655e805618ea1 205 PANTHER PTHR30055 1 199 3.0E-54 T 14-09-2016 AMK01_RS06170 2388b1ae63954b4fd7f655e805618ea1 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 14-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMK01_RS06170 2388b1ae63954b4fd7f655e805618ea1 205 PANTHER PTHR30055:SF79 1 199 3.0E-54 T 14-09-2016 AMK01_RS06170 2388b1ae63954b4fd7f655e805618ea1 205 Gene3D G3DSA:1.10.357.10 74 200 2.1E-26 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS06170 2388b1ae63954b4fd7f655e805618ea1 205 Gene3D G3DSA:1.10.10.60 6 68 1.4E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06170 2388b1ae63954b4fd7f655e805618ea1 205 SUPERFAMILY SSF46689 6 88 1.23E-13 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06170 2388b1ae63954b4fd7f655e805618ea1 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 3.5E-9 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS14030 dd841fd1a43756d1cd8fff3bb84a3c71 111 PANTHER PTHR33755:SF3 1 97 1.4E-13 T 14-09-2016 AMK01_RS14030 dd841fd1a43756d1cd8fff3bb84a3c71 111 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 88 3.2E-8 T 14-09-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AMK01_RS14030 dd841fd1a43756d1cd8fff3bb84a3c71 111 PANTHER PTHR33755 1 97 1.4E-13 T 14-09-2016 AMK01_RS03665 a7172f0eaf3d477d4b4ed4dfe4c2e04a 279 PANTHER PTHR34136 6 272 1.4E-58 T 14-09-2016 AMK01_RS03665 a7172f0eaf3d477d4b4ed4dfe4c2e04a 279 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 70 236 4.6E-48 T 14-09-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 AMK01_RS03665 a7172f0eaf3d477d4b4ed4dfe4c2e04a 279 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 67 238 7.5E-34 T 14-09-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 AMK01_RS12085 a05bb13b66e071541395b9c29ec9bda8 229 Pfam PF00881 Nitroreductase family 27 193 6.9E-27 T 14-09-2016 IPR029479 Nitroreductase AMK01_RS12085 a05bb13b66e071541395b9c29ec9bda8 229 PANTHER PTHR21712:SF31 1 224 3.1E-36 T 14-09-2016 AMK01_RS12085 a05bb13b66e071541395b9c29ec9bda8 229 PANTHER PTHR21712 1 224 3.1E-36 T 14-09-2016 AMK01_RS12085 a05bb13b66e071541395b9c29ec9bda8 229 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 15 219 5.8E-87 T 14-09-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 AMK01_RS12085 a05bb13b66e071541395b9c29ec9bda8 229 Gene3D G3DSA:3.40.109.10 18 226 7.1E-48 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AMK01_RS12085 a05bb13b66e071541395b9c29ec9bda8 229 SUPERFAMILY SSF55469 23 225 6.67E-49 T 14-09-2016 IPR000415 Nitroreductase-like GO:0016491 AMK01_RS01720 a881f78b18af0af2f82ebb9c16699c48 289 SUPERFAMILY SSF51735 1 268 2.26E-32 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01720 a881f78b18af0af2f82ebb9c16699c48 289 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 164 1.7E-6 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS01720 a881f78b18af0af2f82ebb9c16699c48 289 PANTHER PTHR10366 2 283 1.1E-61 T 14-09-2016 AMK01_RS01720 a881f78b18af0af2f82ebb9c16699c48 289 Gene3D G3DSA:3.40.50.720 1 76 5.0E-9 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01720 a881f78b18af0af2f82ebb9c16699c48 289 Gene3D G3DSA:3.40.50.720 100 229 8.7E-13 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01720 a881f78b18af0af2f82ebb9c16699c48 289 PANTHER PTHR10366:SF430 2 283 1.1E-61 T 14-09-2016 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 PANTHER PTHR11063 9 426 1.5E-159 T 14-09-2016 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 PANTHER PTHR11063:SF8 9 426 1.5E-159 T 14-09-2016 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 14 426 38.846 T 14-09-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 SUPERFAMILY SSF53720 15 426 4.97E-109 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 Gene3D G3DSA:3.40.309.10 237 384 4.3E-32 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 Gene3D G3DSA:3.40.605.10 385 426 9.8E-96 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 Gene3D G3DSA:3.40.605.10 13 234 9.8E-96 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 PIRSF PIRSF000151 9 427 8.8E-165 T 14-09-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 Pfam PF00171 Aldehyde dehydrogenase family 46 280 1.6E-15 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 22 416 3.2E-129 T 14-09-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS20905 8cb07e8c27f131200b4d1fb79ca6d2a8 427 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 333 355 - T 14-09-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK01_RS04560 4b21fd78c1278f23d5931335d1b283a0 319 Pfam PF01040 UbiA prenyltransferase family 47 296 5.9E-54 T 14-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AMK01_RS04560 4b21fd78c1278f23d5931335d1b283a0 319 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 94 116 - T 14-09-2016 IPR030470 UbiA prenyltransferase conserved site AMK01_RS04560 4b21fd78c1278f23d5931335d1b283a0 319 PANTHER PTHR11048 2 315 3.1E-110 T 14-09-2016 AMK01_RS04560 4b21fd78c1278f23d5931335d1b283a0 319 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 28 314 9.8E-112 T 14-09-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 AMK01_RS04560 4b21fd78c1278f23d5931335d1b283a0 319 PANTHER PTHR11048:SF28 2 315 3.1E-110 T 14-09-2016 AMK01_RS04560 4b21fd78c1278f23d5931335d1b283a0 319 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 23 315 27.003 T 14-09-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 AMK01_RS20665 5f8ed5b8860411c7e42e417916299259 190 PANTHER PTHR38447 15 189 7.5E-48 T 14-09-2016 AMK01_RS20665 5f8ed5b8860411c7e42e417916299259 190 Pfam PF02559 CarD-like/TRCF domain 15 122 2.6E-13 T 14-09-2016 IPR003711 CarD-like/TRCF domain AMK01_RS20665 5f8ed5b8860411c7e42e417916299259 190 SMART SM01058 14 124 2.4E-32 T 14-09-2016 IPR003711 CarD-like/TRCF domain AMK01_RS20665 5f8ed5b8860411c7e42e417916299259 190 SUPERFAMILY SSF141259 11 79 2.48E-15 T 14-09-2016 IPR003711 CarD-like/TRCF domain AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 Gene3D G3DSA:3.10.580.10 293 413 1.3E-9 T 14-09-2016 AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 SUPERFAMILY SSF55073 425 567 9.42E-18 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 422 521 1.3E-10 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 Pfam PF00990 Diguanylate cyclase, GGDEF domain 424 526 2.2E-11 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 Pfam PF00563 EAL domain 33 254 2.9E-51 T 14-09-2016 IPR001633 EAL domain AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 Gene3D G3DSA:3.30.70.270 423 568 6.1E-19 T 14-09-2016 AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 Pfam PF00571 CBS domain 294 340 7.3E-5 T 14-09-2016 IPR000644 CBS domain AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 PANTHER PTHR33121 32 287 1.4E-41 T 14-09-2016 AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 PANTHER PTHR33121:SF10 32 287 1.4E-41 T 14-09-2016 AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 SUPERFAMILY SSF141868 34 256 1.1E-57 T 14-09-2016 IPR001633 EAL domain AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 Gene3D G3DSA:3.20.20.450 33 256 1.1E-55 T 14-09-2016 IPR001633 EAL domain AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 SMART SM00052 20 262 2.1E-28 T 14-09-2016 IPR001633 EAL domain AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 SUPERFAMILY SSF54631 294 428 1.89E-9 T 14-09-2016 AMK01_RS05850 f43b0d26d8dbf7fad3e43bda130df25f 605 SMART SM00267 407 583 1.9E-5 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 SUPERFAMILY SSF56322 40 387 4.58E-106 T 14-09-2016 IPR005801 ADC synthase GO:0009058 AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 Gene3D G3DSA:3.60.120.10 39 387 6.7E-109 T 14-09-2016 IPR005801 ADC synthase GO:0009058 AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 62 386 4.0E-125 T 14-09-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 PANTHER PTHR11236 131 388 3.4E-109 T 14-09-2016 AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 PANTHER PTHR11236:SF18 131 388 3.4E-109 T 14-09-2016 AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 Pfam PF00425 chorismate binding enzyme 130 383 3.9E-82 T 14-09-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 PRINTS PR00095 Anthranilate synthase component I signature 244 257 1.6E-10 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 PRINTS PR00095 Anthranilate synthase component I signature 339 353 1.6E-10 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 PRINTS PR00095 Anthranilate synthase component I signature 324 338 1.6E-10 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK01_RS18320 581c521eb3497e94637fa2f43edb3982 395 PRINTS PR00095 Anthranilate synthase component I signature 230 243 1.6E-10 T 14-09-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK01_RS02045 d7d53e108783f109075742e75b87fb4f 456 PANTHER PTHR33408 1 447 2.9E-17 T 14-09-2016 AMK01_RS02045 d7d53e108783f109075742e75b87fb4f 456 Pfam PF13751 Transposase DDE domain 325 443 1.6E-22 T 14-09-2016 IPR025668 Transposase DDE domain AMK01_RS02045 d7d53e108783f109075742e75b87fb4f 456 Pfam PF05598 Transposase domain (DUF772) 52 127 4.0E-23 T 14-09-2016 IPR008490 Transposase InsH, N-terminal AMK01_RS01465 d7d53e108783f109075742e75b87fb4f 456 PANTHER PTHR33408 1 447 2.9E-17 T 14-09-2016 AMK01_RS01465 d7d53e108783f109075742e75b87fb4f 456 Pfam PF13751 Transposase DDE domain 325 443 1.6E-22 T 14-09-2016 IPR025668 Transposase DDE domain AMK01_RS01465 d7d53e108783f109075742e75b87fb4f 456 Pfam PF05598 Transposase domain (DUF772) 52 127 4.0E-23 T 14-09-2016 IPR008490 Transposase InsH, N-terminal AMK01_RS10835 d7d53e108783f109075742e75b87fb4f 456 PANTHER PTHR33408 1 447 2.9E-17 T 14-09-2016 AMK01_RS10835 d7d53e108783f109075742e75b87fb4f 456 Pfam PF13751 Transposase DDE domain 325 443 1.6E-22 T 14-09-2016 IPR025668 Transposase DDE domain AMK01_RS10835 d7d53e108783f109075742e75b87fb4f 456 Pfam PF05598 Transposase domain (DUF772) 52 127 4.0E-23 T 14-09-2016 IPR008490 Transposase InsH, N-terminal AMK01_RS03605 64a27997fa30ad0e532647ad1dde4acc 494 PANTHER PTHR30033 1 494 6.5E-49 T 14-09-2016 AMK01_RS03605 64a27997fa30ad0e532647ad1dde4acc 494 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 491 6.0E-90 T 14-09-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AMK01_RS03605 64a27997fa30ad0e532647ad1dde4acc 494 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 447 491 9.3E-9 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK01_RS03605 64a27997fa30ad0e532647ad1dde4acc 494 SUPERFAMILY SSF64518 125 491 1.57E-6 T 14-09-2016 AMK01_RS03605 64a27997fa30ad0e532647ad1dde4acc 494 PANTHER PTHR30033:SF1 1 494 6.5E-49 T 14-09-2016 AMK01_RS16360 329031aef3ee3a018017bb11c2e585df 238 PANTHER PTHR37314:SF1 3 217 5.1E-39 T 14-09-2016 AMK01_RS16360 329031aef3ee3a018017bb11c2e585df 238 Pfam PF06912 Protein of unknown function (DUF1275) 8 216 1.8E-30 T 14-09-2016 IPR010699 Protein of unknown function DUF1275 AMK01_RS16360 329031aef3ee3a018017bb11c2e585df 238 PANTHER PTHR37314 3 217 5.1E-39 T 14-09-2016 AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 PANTHER PTHR11373 18 342 4.5E-76 T 14-09-2016 AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 SUPERFAMILY SSF109604 26 171 1.05E-86 T 14-09-2016 AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 SUPERFAMILY SSF109604 199 401 1.05E-86 T 14-09-2016 AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 37 398 2.6E-96 T 14-09-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 Pfam PF01966 HD domain 75 218 3.8E-14 T 14-09-2016 IPR006674 HD domain AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 SMART SM00471 71 228 1.6E-10 T 14-09-2016 IPR003607 HD/PDEase domain AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 Gene3D G3DSA:1.10.3210.10 32 237 5.4E-81 T 14-09-2016 IPR006674 HD domain AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 Gene3D G3DSA:1.10.3210.10 294 401 5.4E-81 T 14-09-2016 IPR006674 HD domain AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 PANTHER PTHR11373:SF25 18 342 4.5E-76 T 14-09-2016 AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 15 398 39.908 T 14-09-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 AMK01_RS09170 0dd102e6da55c6083426c94e99e1ce74 405 Pfam PF13286 Phosphohydrolase-associated domain 306 396 3.8E-24 T 14-09-2016 IPR026875 Phosphohydrolase-associated domain AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 Gene3D G3DSA:3.30.460.10 667 830 3.4E-52 T 14-09-2016 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 Gene3D G3DSA:3.30.460.10 142 313 3.6E-46 T 14-09-2016 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 Pfam PF08335 GlnD PII-uridylyltransferase 326 467 5.2E-40 T 14-09-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 PANTHER PTHR30621 52 979 3.0E-237 T 14-09-2016 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 51 970 18.005 T 14-09-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 SUPERFAMILY SSF81301 30 314 9.09E-65 T 14-09-2016 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 SUPERFAMILY SSF81593 834 979 3.84E-24 T 14-09-2016 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 SUPERFAMILY SSF81301 551 832 2.75E-76 T 14-09-2016 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 56 305 1.4E-60 T 14-09-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 580 823 2.8E-73 T 14-09-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMK01_RS06620 9c82cd0fe3a9fa3d7e28904079102da3 985 SUPERFAMILY SSF81593 315 467 4.63E-43 T 14-09-2016 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 Gene3D G3DSA:1.10.10.10 150 206 5.2E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 SMART SM00448 4 116 9.9E-18 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 PANTHER PTHR26402:SF151 4 201 1.7E-54 T 14-09-2016 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.5E-13 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.5E-13 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.5E-13 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 PANTHER PTHR26402 4 201 1.7E-54 T 14-09-2016 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 SUPERFAMILY SSF46894 145 205 4.42E-20 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 200 3.4E-19 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 Pfam PF00072 Response regulator receiver domain 7 116 2.1E-18 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 SUPERFAMILY SSF52172 3 131 3.84E-24 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 Gene3D G3DSA:3.40.50.2300 2 149 5.9E-28 T 14-09-2016 AMK01_RS08745 2d644fc0043f1b6c30fa6d1e57915a57 207 SMART SM00421 146 203 1.2E-21 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS13290 7cbf63be68416664c1d688a3f7cadade 125 PANTHER PTHR33204 2 123 1.7E-48 T 14-09-2016 AMK01_RS13290 7cbf63be68416664c1d688a3f7cadade 125 PANTHER PTHR33204:SF7 2 123 1.7E-48 T 14-09-2016 AMK01_RS13290 7cbf63be68416664c1d688a3f7cadade 125 Pfam PF01638 HxlR-like helix-turn-helix 24 111 3.8E-27 T 14-09-2016 IPR002577 Helix-turn-helix, HxlR type AMK01_RS13290 7cbf63be68416664c1d688a3f7cadade 125 SUPERFAMILY SSF46785 8 122 1.25E-34 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13290 7cbf63be68416664c1d688a3f7cadade 125 Gene3D G3DSA:1.10.10.10 3 122 3.4E-45 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS28320 b09246aa1ba97ea504f78baba0273110 279 Gene3D G3DSA:3.90.1200.10 2 171 1.2E-17 T 14-09-2016 AMK01_RS28320 b09246aa1ba97ea504f78baba0273110 279 Pfam PF01636 Phosphotransferase enzyme family 12 112 2.9E-6 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AMK01_RS28320 b09246aa1ba97ea504f78baba0273110 279 SUPERFAMILY SSF56112 1 180 9.69E-22 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS28320 b09246aa1ba97ea504f78baba0273110 279 PANTHER PTHR21064 1 201 9.4E-22 T 14-09-2016 AMK01_RS28320 b09246aa1ba97ea504f78baba0273110 279 PANTHER PTHR21064:SF1 1 201 9.4E-22 T 14-09-2016 AMK01_RS18330 f21b519009556bca3822d044e3131993 94 PANTHER PTHR37828:SF1 1 94 3.1E-21 T 14-09-2016 AMK01_RS18330 f21b519009556bca3822d044e3131993 94 Pfam PF03795 YCII-related domain 1 80 1.8E-9 T 14-09-2016 IPR005545 YCII-related AMK01_RS18330 f21b519009556bca3822d044e3131993 94 PANTHER PTHR37828 1 94 3.1E-21 T 14-09-2016 AMK01_RS18330 f21b519009556bca3822d044e3131993 94 SUPERFAMILY SSF54909 1 80 2.95E-14 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS18330 f21b519009556bca3822d044e3131993 94 Gene3D G3DSA:3.30.70.1060 10 79 8.4E-6 T 14-09-2016 AMK01_RS16420 e3d691616df9ac30bfdf92560610da3d 617 PANTHER PTHR11920:SF257 1 188 1.6E-15 T 14-09-2016 AMK01_RS16420 e3d691616df9ac30bfdf92560610da3d 617 SUPERFAMILY SSF48452 431 584 1.21E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS16420 e3d691616df9ac30bfdf92560610da3d 617 SUPERFAMILY SSF55073 2 173 2.2E-43 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS16420 e3d691616df9ac30bfdf92560610da3d 617 PANTHER PTHR11920 1 188 1.6E-15 T 14-09-2016 AMK01_RS16420 e3d691616df9ac30bfdf92560610da3d 617 Gene3D G3DSA:1.25.40.10 416 584 4.7E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS16420 e3d691616df9ac30bfdf92560610da3d 617 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 7 158 2.4E-15 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS16420 e3d691616df9ac30bfdf92560610da3d 617 Gene3D G3DSA:3.30.70.1230 7 172 6.4E-29 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18085 bd6846ef0075cec5b649225fc1d799c5 426 Gene3D G3DSA:1.20.1250.20 202 372 6.3E-25 T 14-09-2016 AMK01_RS18085 bd6846ef0075cec5b649225fc1d799c5 426 PANTHER PTHR23521:SF2 2 420 1.3E-81 T 14-09-2016 AMK01_RS18085 bd6846ef0075cec5b649225fc1d799c5 426 Gene3D G3DSA:1.20.1250.20 6 177 5.3E-11 T 14-09-2016 AMK01_RS18085 bd6846ef0075cec5b649225fc1d799c5 426 Pfam PF07690 Major Facilitator Superfamily 205 380 8.0E-17 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS18085 bd6846ef0075cec5b649225fc1d799c5 426 PANTHER PTHR23521 2 420 1.3E-81 T 14-09-2016 AMK01_RS18085 bd6846ef0075cec5b649225fc1d799c5 426 SUPERFAMILY SSF103473 7 382 3.79E-43 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 Pfam PF00459 Inositol monophosphatase family 5 259 6.7E-59 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 5.8E-55 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 5.8E-55 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 5.8E-55 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 5.8E-55 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 5.8E-55 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 5.8E-55 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 Gene3D G3DSA:3.40.190.80 153 261 2.3E-35 T 14-09-2016 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PANTHER PTHR20854:SF4 1 262 1.7E-90 T 14-09-2016 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 Gene3D G3DSA:3.30.540.10 5 152 3.7E-51 T 14-09-2016 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 14-09-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 14-09-2016 IPR020583 Inositol monophosphatase, metal-binding site AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PANTHER PTHR20854 1 262 1.7E-90 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 19 41 5.2E-23 T 14-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 200 212 5.2E-23 T 14-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 5.2E-23 T 14-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 158 184 5.2E-23 T 14-09-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMK01_RS18140 9f70f9d82408cddb8eb097ebacf620a4 266 SUPERFAMILY SSF56655 5 261 1.83E-84 T 14-09-2016 AMK01_RS01285 dd50b56460ab258e483f56dcd49d2aa6 349 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 150 159 - T 14-09-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AMK01_RS01285 dd50b56460ab258e483f56dcd49d2aa6 349 SUPERFAMILY SSF51445 29 322 2.24E-76 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS01285 dd50b56460ab258e483f56dcd49d2aa6 349 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 32 304 2.1E-50 T 14-09-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMK01_RS01285 dd50b56460ab258e483f56dcd49d2aa6 349 PANTHER PTHR34142 29 309 1.3E-82 T 14-09-2016 AMK01_RS01285 dd50b56460ab258e483f56dcd49d2aa6 349 Gene3D G3DSA:3.20.20.80 28 332 2.3E-93 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS11200 f38db78b2e6bebeb6e452c416b2b3a4c 167 PANTHER PTHR34182 2 128 2.7E-20 T 14-09-2016 AMK01_RS11200 f38db78b2e6bebeb6e452c416b2b3a4c 167 Pfam PF03840 Preprotein translocase SecG subunit 4 69 2.0E-17 T 14-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK01_RS11200 f38db78b2e6bebeb6e452c416b2b3a4c 167 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.6E-9 T 14-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK01_RS11200 f38db78b2e6bebeb6e452c416b2b3a4c 167 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.6E-9 T 14-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK01_RS11200 f38db78b2e6bebeb6e452c416b2b3a4c 167 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 70 3.9E-19 T 14-09-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK01_RS17645 ccfc1cce5e5cec450c0ee20a816d4e99 259 SUPERFAMILY SSF161098 4 252 7.66E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17645 ccfc1cce5e5cec450c0ee20a816d4e99 259 PANTHER PTHR30193 4 259 9.8E-51 T 14-09-2016 AMK01_RS17645 ccfc1cce5e5cec450c0ee20a816d4e99 259 PANTHER PTHR30193:SF20 4 259 9.8E-51 T 14-09-2016 AMK01_RS17645 ccfc1cce5e5cec450c0ee20a816d4e99 259 Gene3D G3DSA:1.10.3720.10 8 253 4.9E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17645 ccfc1cce5e5cec450c0ee20a816d4e99 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 249 1.1E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11815 82e00cc532a298d8c0677f07e1279c6d 157 PANTHER PTHR23091 1 137 5.8E-17 T 14-09-2016 AMK01_RS11815 82e00cc532a298d8c0677f07e1279c6d 157 Gene3D G3DSA:3.40.630.30 2 153 1.6E-40 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11815 82e00cc532a298d8c0677f07e1279c6d 157 SUPERFAMILY SSF55729 5 153 2.74E-32 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11815 82e00cc532a298d8c0677f07e1279c6d 157 Pfam PF13673 Acetyltransferase (GNAT) domain 32 142 1.4E-16 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS04015 358e2c69168169c9fdba56df6d5d990b 323 Gene3D G3DSA:3.90.550.10 4 119 2.1E-7 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS04015 358e2c69168169c9fdba56df6d5d990b 323 SUPERFAMILY SSF53448 3 241 1.74E-21 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS14010 f29f2f3fd5b9fb633aa8cdd919b25e3f 406 SUPERFAMILY SSF53383 3 400 3.71E-91 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS14010 f29f2f3fd5b9fb633aa8cdd919b25e3f 406 Pfam PF00155 Aminotransferase class I and II 62 395 5.0E-24 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS14010 f29f2f3fd5b9fb633aa8cdd919b25e3f 406 Gene3D G3DSA:3.40.640.10 64 281 2.9E-61 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS14010 f29f2f3fd5b9fb633aa8cdd919b25e3f 406 PANTHER PTHR11751 15 404 5.5E-103 T 14-09-2016 AMK01_RS14010 f29f2f3fd5b9fb633aa8cdd919b25e3f 406 PANTHER PTHR11751:SF294 15 404 5.5E-103 T 14-09-2016 AMK01_RS14010 f29f2f3fd5b9fb633aa8cdd919b25e3f 406 Gene3D G3DSA:3.90.1150.10 282 400 4.4E-15 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 SUPERFAMILY SSF55874 283 434 4.58E-24 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 PANTHER PTHR24423 15 32 1.7E-42 T 14-09-2016 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 SMART SM00388 218 284 6.1E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 432 1.9E-14 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 PANTHER PTHR24423:SF474 195 433 1.7E-42 T 14-09-2016 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 1.1E-5 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 1.1E-5 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 Gene3D G3DSA:3.30.565.10 286 434 1.6E-23 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 283 3.0E-9 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 PANTHER PTHR24423:SF474 15 32 1.7E-42 T 14-09-2016 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 PANTHER PTHR24423 195 433 1.7E-42 T 14-09-2016 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 SMART SM00387 324 435 6.2E-20 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 SUPERFAMILY SSF47384 207 279 2.55E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00290 280aa05dc5ca39fd92d6202badf5c2c9 442 Gene3D G3DSA:1.10.287.130 213 279 4.8E-6 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 Pfam PF00664 ABC transporter transmembrane region 35 298 8.2E-58 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 Gene3D G3DSA:1.20.1560.10 20 329 6.5E-81 T 14-09-2016 AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 Pfam PF00005 ABC transporter 368 517 8.8E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 14 588 8.5E-271 T 14-09-2016 IPR011918 ABC transporter, ATP-binding/permease protein AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 SUPERFAMILY SSF52540 342 588 7.78E-91 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 SUPERFAMILY SSF90123 20 332 1.31E-78 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 Gene3D G3DSA:3.40.50.300 350 581 1.4E-85 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 SMART SM00382 377 563 5.1E-21 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS18105 ec0a105397028ce9b67b1eff9a7fb032 609 PANTHER PTHR24221 2 594 9.1E-249 T 14-09-2016 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 Gene3D G3DSA:1.10.1140.10 357 473 8.0E-56 T 14-09-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 SUPERFAMILY SSF52540 82 360 5.19E-91 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 PANTHER PTHR15184:SF44 5 474 0.0 T 14-09-2016 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 SUPERFAMILY SSF47917 357 472 4.71E-54 T 14-09-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 12 78 1.7E-21 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 SMART SM00382 147 331 7.4E-5 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 354 1.7E-63 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 9 472 2.8E-252 T 14-09-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 SUPERFAMILY SSF50615 6 80 1.44E-25 T 14-09-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 PIRSF PIRSF039072 1 475 1.8E-282 T 14-09-2016 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 14-09-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 Gene3D G3DSA:3.40.50.300 81 356 3.0E-111 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 PANTHER PTHR15184 5 474 0.0 T 14-09-2016 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 Hamap MF_01347 ATP synthase subunit beta [atpB]. 7 472 57.487 T 14-09-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS19900 1fb3f40195a338ccefa4bfecb457ff18 475 Gene3D G3DSA:2.40.10.170 4 80 1.0E-34 T 14-09-2016 AMK01_RS17130 cf2ee0ea01237478272e695e21abe87f 155 Pfam PF04403 Paraquat-inducible protein A 10 143 1.8E-23 T 14-09-2016 IPR007498 Paraquat-inducible protein A AMK01_RS10275 89f0aaa1e3c0109d54c86fce16718071 551 Pfam PF03050 Transposase IS66 family 197 495 2.1E-85 T 14-09-2016 IPR004291 Transposase, IS66 AMK01_RS10275 89f0aaa1e3c0109d54c86fce16718071 551 Pfam PF13005 zinc-finger binding domain of transposase IS66 137 182 1.8E-15 T 14-09-2016 IPR024474 Zinc-finger binding domain of transposase IS66 AMK01_RS10275 89f0aaa1e3c0109d54c86fce16718071 551 Pfam PF13817 IS66 C-terminal element 502 539 5.2E-15 T 14-09-2016 AMK01_RS10275 89f0aaa1e3c0109d54c86fce16718071 551 PANTHER PTHR33678 28 538 2.2E-95 T 14-09-2016 AMK01_RS10275 89f0aaa1e3c0109d54c86fce16718071 551 PANTHER PTHR33678:SF1 28 538 2.2E-95 T 14-09-2016 AMK01_RS10275 89f0aaa1e3c0109d54c86fce16718071 551 Pfam PF13007 Transposase C of IS166 homeodomain 56 132 5.3E-17 T 14-09-2016 IPR024463 Transposase TnpC, homeodomain AMK01_RS05025 083a6f5cfc59205fff3da62e404950bb 228 SMART SM00418 9 88 4.0E-14 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS05025 083a6f5cfc59205fff3da62e404950bb 228 Pfam PF12840 Helix-turn-helix domain 9 68 1.2E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05025 083a6f5cfc59205fff3da62e404950bb 228 PANTHER PTHR39168:SF1 1 228 6.5E-54 T 14-09-2016 AMK01_RS05025 083a6f5cfc59205fff3da62e404950bb 228 SUPERFAMILY SSF46785 5 119 4.76E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05025 083a6f5cfc59205fff3da62e404950bb 228 Gene3D G3DSA:1.10.10.10 6 90 1.6E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05025 083a6f5cfc59205fff3da62e404950bb 228 PANTHER PTHR39168 1 228 6.5E-54 T 14-09-2016 AMK01_RS05860 1b98a3d0b2afae0c18ddd681d0b9c5b2 473 Pfam PF07690 Major Facilitator Superfamily 33 357 1.0E-26 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS05860 1b98a3d0b2afae0c18ddd681d0b9c5b2 473 Gene3D G3DSA:1.20.1250.20 28 207 5.2E-18 T 14-09-2016 AMK01_RS05860 1b98a3d0b2afae0c18ddd681d0b9c5b2 473 Gene3D G3DSA:1.20.1250.20 282 470 4.7E-11 T 14-09-2016 AMK01_RS05860 1b98a3d0b2afae0c18ddd681d0b9c5b2 473 SUPERFAMILY SSF103473 18 209 4.84E-43 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS05860 1b98a3d0b2afae0c18ddd681d0b9c5b2 473 SUPERFAMILY SSF103473 257 459 4.84E-43 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS05860 1b98a3d0b2afae0c18ddd681d0b9c5b2 473 PANTHER PTHR23501 240 471 2.4E-47 T 14-09-2016 AMK01_RS05860 1b98a3d0b2afae0c18ddd681d0b9c5b2 473 PANTHER PTHR23501 27 211 2.4E-47 T 14-09-2016 AMK01_RS16520 d5dcc48facba4dad42c07b8f18132c2a 369 Gene3D G3DSA:3.90.550.10 11 231 2.8E-58 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16520 d5dcc48facba4dad42c07b8f18132c2a 369 Pfam PF00535 Glycosyl transferase family 2 13 135 3.8E-35 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS16520 d5dcc48facba4dad42c07b8f18132c2a 369 SUPERFAMILY SSF53448 11 231 5.46E-60 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16520 d5dcc48facba4dad42c07b8f18132c2a 369 PANTHER PTHR22916 11 231 3.7E-58 T 14-09-2016 AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 Gene3D G3DSA:1.10.1740.10 3 113 3.3E-25 T 14-09-2016 AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 Gene3D G3DSA:1.10.10.10 117 178 4.0E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 PANTHER PTHR30173 1 179 6.2E-42 T 14-09-2016 AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 Pfam PF08281 Sigma-70, region 4 121 173 1.5E-12 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 Pfam PF04542 Sigma-70 region 2 24 91 4.6E-15 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 SUPERFAMILY SSF88946 3 109 2.2E-23 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 PANTHER PTHR30173:SF31 1 179 6.2E-42 T 14-09-2016 AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 177 9.5E-30 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS02345 3ef31dac5804a82e97ed28d46692f111 179 SUPERFAMILY SSF88659 117 178 2.24E-12 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15230 e2715e4fcbe754c5ea34bc7ef948fdfe 388 Gene3D G3DSA:1.20.1250.20 5 185 1.4E-29 T 14-09-2016 AMK01_RS15230 e2715e4fcbe754c5ea34bc7ef948fdfe 388 SUPERFAMILY SSF103473 3 379 1.96E-50 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS15230 e2715e4fcbe754c5ea34bc7ef948fdfe 388 PANTHER PTHR23501 1 379 3.7E-153 T 14-09-2016 AMK01_RS15230 e2715e4fcbe754c5ea34bc7ef948fdfe 388 PANTHER PTHR23501:SF4 1 379 3.7E-153 T 14-09-2016 AMK01_RS15230 e2715e4fcbe754c5ea34bc7ef948fdfe 388 Pfam PF07690 Major Facilitator Superfamily 8 309 2.0E-35 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS15230 e2715e4fcbe754c5ea34bc7ef948fdfe 388 Gene3D G3DSA:1.20.1250.20 186 375 1.7E-10 T 14-09-2016 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 PANTHER PTHR11811 239 338 9.4E-156 T 14-09-2016 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 152 3.2E-37 T 14-09-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 Gene3D G3DSA:1.10.1040.10 189 330 5.6E-34 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 PANTHER PTHR11811 1 215 9.4E-156 T 14-09-2016 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 SMART SM01350 187 343 4.4E-5 T 14-09-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-09-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 340 2.5E-126 T 14-09-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 187 215 4.1E-9 T 14-09-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 SUPERFAMILY SSF48179 185 332 6.8E-37 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 SUPERFAMILY SSF51735 1 155 5.03E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 3.3E-13 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 58 87 3.3E-13 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 111 136 3.3E-13 T 14-09-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 Gene3D G3DSA:3.40.50.720 1 188 2.0E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 PANTHER PTHR11811:SF28 239 338 9.4E-156 T 14-09-2016 AMK01_RS18005 f0dbd33475858392703dee933fcaa999 343 PANTHER PTHR11811:SF28 1 215 9.4E-156 T 14-09-2016 AMK01_RS07785 f4bbb36ac066c681694481f07af3383c 326 Pfam PF17038 Cellulose biosynthesis protein BcsN 35 324 2.0E-56 T 14-09-2016 IPR031482 Cellulose biosynthesis protein BcsN AMK01_RS08430 a3c50bf45bc853747064d778f2596a82 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.2E-69 T 14-09-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMK01_RS08430 a3c50bf45bc853747064d778f2596a82 156 PIRSF PIRSF002122 2 156 2.4E-63 T 14-09-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMK01_RS08430 a3c50bf45bc853747064d778f2596a82 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-09-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 AMK01_RS08430 a3c50bf45bc853747064d778f2596a82 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.6E-68 T 14-09-2016 IPR023798 Ribosomal protein S7 domain AMK01_RS08430 a3c50bf45bc853747064d778f2596a82 156 Gene3D G3DSA:1.10.455.10 7 156 4.4E-68 T 14-09-2016 IPR023798 Ribosomal protein S7 domain AMK01_RS08430 a3c50bf45bc853747064d778f2596a82 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.469 T 14-09-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMK01_RS08430 a3c50bf45bc853747064d778f2596a82 156 PANTHER PTHR11205 1 156 1.1E-94 T 14-09-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMK01_RS08430 a3c50bf45bc853747064d778f2596a82 156 SUPERFAMILY SSF47973 2 149 1.57E-63 T 14-09-2016 IPR023798 Ribosomal protein S7 domain AMK01_RS11490 723d31b26afce478fb3d9059f830348e 120 Gene3D G3DSA:2.40.50.100 2 118 2.8E-48 T 14-09-2016 AMK01_RS11490 723d31b26afce478fb3d9059f830348e 120 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 119 4.5E-41 T 14-09-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 AMK01_RS11490 723d31b26afce478fb3d9059f830348e 120 SUPERFAMILY SSF51230 2 118 2.36E-40 T 14-09-2016 IPR011053 Single hybrid motif AMK01_RS11490 723d31b26afce478fb3d9059f830348e 120 Pfam PF01597 Glycine cleavage H-protein 2 118 5.3E-41 T 14-09-2016 IPR002930 Glycine cleavage system H-protein AMK01_RS11490 723d31b26afce478fb3d9059f830348e 120 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 120 25.51 T 14-09-2016 IPR002930 Glycine cleavage system H-protein AMK01_RS11490 723d31b26afce478fb3d9059f830348e 120 PANTHER PTHR11715 2 117 4.6E-57 T 14-09-2016 IPR002930 Glycine cleavage system H-protein AMK01_RS11490 723d31b26afce478fb3d9059f830348e 120 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 42 71 - T 14-09-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 PANTHER PTHR33164:SF5 12 159 1.1E-53 T 14-09-2016 AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 2.1E-5 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 2.1E-5 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 82 2.1E-5 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 Pfam PF01047 MarR family 49 107 6.6E-15 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 Gene3D G3DSA:1.10.10.10 9 155 1.6E-42 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 SUPERFAMILY SSF46785 20 155 1.04E-34 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 SMART SM00347 42 140 1.9E-22 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS06040 561893f29a6f62158aaece3d755be765 160 PANTHER PTHR33164 12 159 1.1E-53 T 14-09-2016 AMK01_RS12555 88db406da7334110b48d1a861bd879d7 377 SUPERFAMILY SSF51735 4 172 5.14E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12555 88db406da7334110b48d1a861bd879d7 377 Gene3D G3DSA:3.30.360.10 309 358 2.5E-26 T 14-09-2016 AMK01_RS12555 88db406da7334110b48d1a861bd879d7 377 Gene3D G3DSA:3.30.360.10 142 267 2.5E-26 T 14-09-2016 AMK01_RS12555 88db406da7334110b48d1a861bd879d7 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 118 4.5E-19 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS12555 88db406da7334110b48d1a861bd879d7 377 PANTHER PTHR22604 1 367 3.2E-56 T 14-09-2016 AMK01_RS12555 88db406da7334110b48d1a861bd879d7 377 Gene3D G3DSA:3.40.50.720 2 141 1.1E-33 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12555 88db406da7334110b48d1a861bd879d7 377 SUPERFAMILY SSF55347 129 296 8.01E-31 T 14-09-2016 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PANTHER PTHR10266:SF3 182 286 1.2E-104 T 14-09-2016 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PANTHER PTHR10266:SF3 49 163 1.2E-104 T 14-09-2016 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PANTHER PTHR10266 49 163 1.2E-104 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 Gene3D G3DSA:1.10.760.10 49 258 9.8E-84 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 Gene3D G3DSA:1.20.5.100 259 294 3.2E-16 T 14-09-2016 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PANTHER PTHR10266 182 286 1.2E-104 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 SUPERFAMILY SSF46626 45 257 6.24E-68 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PRINTS PR00603 Cytochrome C1 signature 219 238 4.5E-58 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PRINTS PR00603 Cytochrome C1 signature 151 175 4.5E-58 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PRINTS PR00603 Cytochrome C1 signature 118 138 4.5E-58 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PRINTS PR00603 Cytochrome C1 signature 258 273 4.5E-58 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PRINTS PR00603 Cytochrome C1 signature 53 72 4.5E-58 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PRINTS PR00603 Cytochrome C1 signature 207 218 4.5E-58 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PRINTS PR00603 Cytochrome C1 signature 239 258 4.5E-58 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 PRINTS PR00603 Cytochrome C1 signature 73 92 4.5E-58 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS15480 de71f01b57f46e002c8baf9bdf61fd28 294 Pfam PF02167 Cytochrome C1 family 55 291 1.1E-100 T 14-09-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 PANTHER PTHR13779:SF25 11 334 5.6E-163 T 14-09-2016 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 334 5.0E-43 T 14-09-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 PRINTS PR00819 CbxX/CfqX superfamily signature 168 187 5.8E-7 T 14-09-2016 IPR000641 CbxX/CfqX GO:0005524 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 PRINTS PR00819 CbxX/CfqX superfamily signature 221 233 5.8E-7 T 14-09-2016 IPR000641 CbxX/CfqX GO:0005524 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 PRINTS PR00819 CbxX/CfqX superfamily signature 55 70 5.8E-7 T 14-09-2016 IPR000641 CbxX/CfqX GO:0005524 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 328 4.5E-135 T 14-09-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 SMART SM00382 52 179 2.0E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 346 170.267 T 14-09-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 Gene3D G3DSA:3.40.50.300 21 179 4.9E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 3.8E-31 T 14-09-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 12 235 1.7E-112 T 14-09-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 PANTHER PTHR13779 11 334 5.6E-163 T 14-09-2016 AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 Gene3D G3DSA:1.10.10.10 258 329 1.9E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 SUPERFAMILY SSF52540 21 254 1.0E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 SUPERFAMILY SSF46785 257 331 2.45E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17965 a7f458864dece86e6dee59d78b997407 346 Gene3D G3DSA:1.10.8.60 184 256 2.1E-29 T 14-09-2016 AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 SUPERFAMILY SSF46785 3 87 3.27E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 Gene3D G3DSA:3.40.190.10 177 260 1.5E-18 T 14-09-2016 AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.7E-20 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 SUPERFAMILY SSF53850 89 293 4.52E-41 T 14-09-2016 AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 Gene3D G3DSA:1.10.10.10 2 87 5.2E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 PANTHER PTHR30537 1 291 2.3E-104 T 14-09-2016 AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 PANTHER PTHR30537:SF5 1 291 2.3E-104 T 14-09-2016 AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 Pfam PF03466 LysR substrate binding domain 89 291 1.7E-39 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS13795 3b12c941a3005ff393797aa463f4a68b 300 Gene3D G3DSA:3.40.190.10 94 176 1.2E-20 T 14-09-2016 AMK01_RS18010 58b51c2acd416cb9fa0f5f7eb1d3a718 160 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 136 3.3E-13 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS18010 58b51c2acd416cb9fa0f5f7eb1d3a718 160 SUPERFAMILY SSF55961 5 137 1.07E-21 T 14-09-2016 AMK01_RS18010 58b51c2acd416cb9fa0f5f7eb1d3a718 160 Gene3D G3DSA:3.30.530.20 5 137 4.5E-19 T 14-09-2016 IPR023393 START-like domain AMK01_RS01780 657568915134cf8085f97619d10e8641 305 Gene3D G3DSA:3.40.1010.10 31 138 9.3E-15 T 14-09-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 PANTHER PTHR21091 28 248 2.0E-80 T 14-09-2016 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 31 231 6.9E-29 T 14-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 Gene3D G3DSA:3.30.950.10 139 251 2.6E-41 T 14-09-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 31 297 5.6E-79 T 14-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 PANTHER PTHR21091:SF18 28 248 2.0E-80 T 14-09-2016 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 30 250 37.38 T 14-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 SUPERFAMILY SSF53790 29 248 2.49E-80 T 14-09-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 108 119 - T 14-09-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS01780 657568915134cf8085f97619d10e8641 305 PIRSF PIRSF005917 19 302 5.0E-100 T 14-09-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS20425 7fdc460209f62551142bbbc0ae193310 62 Gene3D G3DSA:2.20.25.10 15 61 1.4E-24 T 14-09-2016 AMK01_RS20425 7fdc460209f62551142bbbc0ae193310 62 SUPERFAMILY SSF158997 8 61 2.62E-20 T 14-09-2016 AMK01_RS20425 7fdc460209f62551142bbbc0ae193310 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 8 61 27.205 T 14-09-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 AMK01_RS20425 7fdc460209f62551142bbbc0ae193310 62 PANTHER PTHR33505 9 62 8.8E-24 T 14-09-2016 AMK01_RS20425 7fdc460209f62551142bbbc0ae193310 62 Pfam PF03966 Trm112p-like protein 9 48 2.2E-9 T 14-09-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 AMK01_RS10450 5095c8ca8ebef4777b08125b66bdb233 437 PANTHER PTHR32027:SF0 41 435 3.0E-73 T 14-09-2016 AMK01_RS10450 5095c8ca8ebef4777b08125b66bdb233 437 Gene3D G3DSA:2.30.40.10 35 87 3.4E-8 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS10450 5095c8ca8ebef4777b08125b66bdb233 437 Pfam PF07969 Amidohydrolase family 157 412 3.3E-32 T 14-09-2016 IPR013108 Amidohydrolase 3 AMK01_RS10450 5095c8ca8ebef4777b08125b66bdb233 437 PANTHER PTHR32027 41 435 3.0E-73 T 14-09-2016 AMK01_RS10450 5095c8ca8ebef4777b08125b66bdb233 437 SUPERFAMILY SSF51338 5 75 1.26E-8 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS10450 5095c8ca8ebef4777b08125b66bdb233 437 SUPERFAMILY SSF51338 383 402 1.26E-8 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS10450 5095c8ca8ebef4777b08125b66bdb233 437 Gene3D G3DSA:3.20.20.140 88 381 1.3E-93 T 14-09-2016 AMK01_RS10450 5095c8ca8ebef4777b08125b66bdb233 437 SUPERFAMILY SSF51556 75 392 7.15E-84 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS18245 25633caba87be53f00d32cf10dfee769 351 SUPERFAMILY SSF53474 25 301 5.74E-39 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS18245 25633caba87be53f00d32cf10dfee769 351 PANTHER PTHR10992 8 313 1.6E-23 T 14-09-2016 AMK01_RS18245 25633caba87be53f00d32cf10dfee769 351 Gene3D G3DSA:3.40.50.1820 28 303 2.7E-35 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS18245 25633caba87be53f00d32cf10dfee769 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 256 270 1.6E-9 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS18245 25633caba87be53f00d32cf10dfee769 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 1.6E-9 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS18245 25633caba87be53f00d32cf10dfee769 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 99 1.6E-9 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS18245 25633caba87be53f00d32cf10dfee769 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 1.6E-9 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS18245 25633caba87be53f00d32cf10dfee769 351 Pfam PF12146 Serine aminopeptidase, S33 87 278 4.8E-14 T 14-09-2016 IPR022742 Serine aminopeptidase, S33 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 Pfam PF08281 Sigma-70, region 4 181 231 1.7E-15 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 SUPERFAMILY SSF88946 71 152 7.46E-18 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 PANTHER PTHR30173 73 232 1.2E-35 T 14-09-2016 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 Pfam PF04542 Sigma-70 region 2 78 141 2.0E-12 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 75 232 1.5E-28 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 SUPERFAMILY SSF88659 176 233 7.63E-15 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 98 128 - T 14-09-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 Gene3D G3DSA:1.10.1740.10 70 164 9.9E-21 T 14-09-2016 AMK01_RS18945 9bd8d0bd5e4371631543442711590b70 247 Gene3D G3DSA:1.10.10.10 176 234 5.4E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03110 5242c10cd05f7831eac6b9f87bd391ad 70 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 14 69 17.212 T 14-09-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AMK01_RS03110 5242c10cd05f7831eac6b9f87bd391ad 70 SUPERFAMILY SSF57716 15 68 1.08E-15 T 14-09-2016 AMK01_RS03110 5242c10cd05f7831eac6b9f87bd391ad 70 Pfam PF03884 Domain of unknown function (DUF329) 19 62 3.1E-14 T 14-09-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AMK01_RS03110 5242c10cd05f7831eac6b9f87bd391ad 70 PANTHER PTHR36150 13 70 1.9E-13 T 14-09-2016 AMK01_RS03110 5242c10cd05f7831eac6b9f87bd391ad 70 Gene3D G3DSA:3.30.50.10 12 68 4.5E-21 T 14-09-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AMK01_RS03110 5242c10cd05f7831eac6b9f87bd391ad 70 PANTHER PTHR36150:SF1 13 70 1.9E-13 T 14-09-2016 AMK01_RS03880 3466b1fcbea0ec37ff0a35fbf87d42a3 179 Pfam PF01202 Shikimate kinase 18 128 4.3E-10 T 14-09-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS03880 3466b1fcbea0ec37ff0a35fbf87d42a3 179 PANTHER PTHR11603 2 172 9.6E-79 T 14-09-2016 AMK01_RS03880 3466b1fcbea0ec37ff0a35fbf87d42a3 179 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 12 166 2.8E-60 T 14-09-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 AMK01_RS03880 3466b1fcbea0ec37ff0a35fbf87d42a3 179 Gene3D G3DSA:3.40.50.300 8 173 1.9E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03880 3466b1fcbea0ec37ff0a35fbf87d42a3 179 SUPERFAMILY SSF52540 6 170 1.76E-24 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 PANTHER PTHR13691:SF5 1 278 5.7E-132 T 14-09-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 8.8E-120 T 14-09-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 SUPERFAMILY SSF50249 2 122 3.02E-46 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 SMART SM01382 125 253 1.2E-84 T 14-09-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 PANTHER PTHR13691 1 278 5.7E-132 T 14-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 Gene3D G3DSA:2.40.50.140 1 114 8.6E-49 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 SUPERFAMILY SSF50104 127 272 4.33E-58 T 14-09-2016 IPR008991 Translation protein SH3-like domain AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 14-09-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 SMART SM01383 42 118 9.4E-43 T 14-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.658 T 14-09-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 5.4E-53 T 14-09-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 Gene3D G3DSA:4.10.950.10 197 274 3.9E-31 T 14-09-2016 IPR014726 Ribosomal protein L2, domain 3 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 Gene3D G3DSA:2.30.30.30 121 196 5.9E-31 T 14-09-2016 IPR014722 Ribosomal protein L2 domain 2 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 PIRSF PIRSF002158 5 276 7.8E-96 T 14-09-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08465 4232ef7db3321fea8a86b1884dd0c08c 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.9E-31 T 14-09-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 SUPERFAMILY SSF52833 1 90 2.52E-19 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 PANTHER PTHR11260 1 207 8.4E-62 T 14-09-2016 AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 3 208 4.8E-63 T 14-09-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 PANTHER PTHR11260:SF289 1 207 8.4E-62 T 14-09-2016 AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 Pfam PF13410 Glutathione S-transferase, C-terminal domain 137 190 2.4E-7 T 14-09-2016 AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 Gene3D G3DSA:3.40.30.10 1 91 6.2E-25 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 SUPERFAMILY SSF47616 83 208 7.1E-23 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 Gene3D G3DSA:1.20.1050.10 92 207 3.6E-32 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS12315 14dc6bb94dc126cd17fab1fbe67694a3 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 83 1.9E-14 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 Gene3D G3DSA:3.30.565.10 728 898 5.7E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 PANTHER PTHR24423 655 1075 2.4E-101 T 14-09-2016 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 PANTHER PTHR24423 1 10 2.4E-101 T 14-09-2016 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 PANTHER PTHR24423 260 297 2.4E-101 T 14-09-2016 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 SUPERFAMILY SSF47384 662 743 4.32E-20 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 Gene3D G3DSA:3.40.50.2300 918 1035 3.2E-25 T 14-09-2016 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 Pfam PF00072 Response regulator receiver domain 923 1032 6.6E-19 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 SMART SM00388 676 742 8.5E-19 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 SMART SM00387 789 900 7.0E-32 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 Pfam PF00512 His Kinase A (phospho-acceptor) domain 677 742 3.4E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 SMART SM00448 921 1032 2.8E-18 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 878 1.2E-9 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 853 1.2E-9 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 884 897 1.2E-9 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 839 1.2E-9 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 Gene3D G3DSA:1.10.287.130 669 727 3.5E-14 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 789 897 9.5E-21 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 SUPERFAMILY SSF52172 919 1041 9.39E-29 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS17060 0445657811c388ba2655ae3243d1a71f 1127 SUPERFAMILY SSF55874 732 896 2.49E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 6.1E-51 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 6.1E-51 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 6.1E-51 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 6.1E-51 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 6.1E-51 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 6.1E-51 T 14-09-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 SUPERFAMILY SSF50494 39 256 3.14E-63 T 14-09-2016 IPR009003 Peptidase S1, PA clan AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 Pfam PF13180 PDZ domain 395 460 4.6E-10 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 Pfam PF13180 PDZ domain 268 359 3.2E-14 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 Gene3D G3DSA:2.30.42.10 270 365 8.3E-25 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 Gene3D G3DSA:2.30.42.10 378 462 1.0E-16 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 465 4.7E-149 T 14-09-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 PANTHER PTHR22939 32 467 1.6E-113 T 14-09-2016 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 SUPERFAMILY SSF50156 285 363 6.31E-21 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 SUPERFAMILY SSF50156 218 244 6.31E-21 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 Gene3D G3DSA:2.40.10.10 39 155 3.5E-36 T 14-09-2016 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 PANTHER PTHR22939:SF93 32 467 1.6E-113 T 14-09-2016 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 SMART SM00228 377 459 3.8E-6 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 SMART SM00228 283 350 8.4E-10 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 Pfam PF13365 Trypsin-like peptidase domain 93 228 1.1E-33 T 14-09-2016 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 SUPERFAMILY SSF50156 378 463 6.31E-16 T 14-09-2016 IPR001478 PDZ domain GO:0005515 AMK01_RS08610 bc46668c3ff03af9ff96c2a5f30c9d0e 467 Gene3D G3DSA:2.40.10.10 156 269 1.3E-40 T 14-09-2016 AMK01_RS12550 dacbefff11cc62c3435d0156e6d8cdcb 343 Gene3D G3DSA:3.20.20.100 12 330 8.9E-83 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS12550 dacbefff11cc62c3435d0156e6d8cdcb 343 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 126 136 3.6E-5 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS12550 dacbefff11cc62c3435d0156e6d8cdcb 343 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 283 296 3.6E-5 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS12550 dacbefff11cc62c3435d0156e6d8cdcb 343 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 270 282 3.6E-5 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS12550 dacbefff11cc62c3435d0156e6d8cdcb 343 PANTHER PTHR11732:SF191 13 331 5.7E-170 T 14-09-2016 AMK01_RS12550 dacbefff11cc62c3435d0156e6d8cdcb 343 SUPERFAMILY SSF51430 13 327 5.11E-87 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS12550 dacbefff11cc62c3435d0156e6d8cdcb 343 PANTHER PTHR11732 13 331 5.7E-170 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS12550 dacbefff11cc62c3435d0156e6d8cdcb 343 Pfam PF00248 Aldo/keto reductase family 28 325 3.5E-64 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 SUPERFAMILY SSF54768 19 87 4.92E-23 T 14-09-2016 AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 14-09-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 175 35.177 T 14-09-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 Gene3D G3DSA:3.30.230.10 88 170 1.6E-32 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 SUPERFAMILY SSF54211 91 170 1.97E-25 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 Pfam PF00333 Ribosomal protein S5, N-terminal domain 23 86 3.6E-28 T 14-09-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 PANTHER PTHR13718 21 172 5.9E-65 T 14-09-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 Gene3D G3DSA:3.30.160.20 20 83 5.8E-30 T 14-09-2016 IPR014720 Double-stranded RNA-binding domain AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 Pfam PF03719 Ribosomal protein S5, C-terminal domain 98 169 1.6E-28 T 14-09-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK01_RS08535 19a195f427071317fbb1c41544c82d04 189 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 20 172 1.5E-65 T 14-09-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK01_RS10505 1e157f242826cd18465fba5009638e65 312 PANTHER PTHR30193:SF6 9 310 7.4E-82 T 14-09-2016 AMK01_RS10505 1e157f242826cd18465fba5009638e65 312 Gene3D G3DSA:1.10.3720.10 82 311 8.5E-55 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10505 1e157f242826cd18465fba5009638e65 312 PANTHER PTHR30193 9 310 7.4E-82 T 14-09-2016 AMK01_RS10505 1e157f242826cd18465fba5009638e65 312 SUPERFAMILY SSF161098 76 300 5.89E-52 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10505 1e157f242826cd18465fba5009638e65 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 308 1.4E-6 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11110 597c44ab8e780cdd3120c4643c1e9ea6 268 SUPERFAMILY SSF54001 50 253 1.26E-39 T 14-09-2016 AMK01_RS11110 597c44ab8e780cdd3120c4643c1e9ea6 268 PANTHER PTHR33490:SF3 1 267 3.1E-95 T 14-09-2016 AMK01_RS11110 597c44ab8e780cdd3120c4643c1e9ea6 268 Pfam PF01841 Transglutaminase-like superfamily 127 225 1.8E-18 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS11110 597c44ab8e780cdd3120c4643c1e9ea6 268 PANTHER PTHR33490 1 267 3.1E-95 T 14-09-2016 AMK01_RS11110 597c44ab8e780cdd3120c4643c1e9ea6 268 Gene3D G3DSA:3.90.260.10 165 226 1.7E-9 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS11110 597c44ab8e780cdd3120c4643c1e9ea6 268 SMART SM00460 161 227 4.8E-13 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 SUPERFAMILY SSF46955 5 127 3.33E-33 T 14-09-2016 IPR009061 Putative DNA-binding domain AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 PANTHER PTHR30204:SF18 1 115 1.2E-31 T 14-09-2016 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 Gene3D G3DSA:1.10.1660.10 59 137 3.6E-28 T 14-09-2016 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 Pfam PF00376 MerR family regulatory protein 5 42 2.5E-14 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 PANTHER PTHR30204 1 115 1.2E-31 T 14-09-2016 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 Pfam PF09278 MerR, DNA binding 48 109 2.1E-20 T 14-09-2016 IPR015358 Transcription regulator MerR, DNA binding AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 SMART SM00422 4 73 4.7E-25 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 2.4E-13 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.4E-13 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 2.4E-13 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS19215 e99e9846cb2a99d31d4080510e02f3f4 140 Gene3D G3DSA:1.10.1660.10 3 58 7.6E-24 T 14-09-2016 AMK01_RS06445 c65481a3d3d528d6f373b201efc532d4 318 SUPERFAMILY SSF47090 259 313 3.14E-12 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS06445 c65481a3d3d528d6f373b201efc532d4 318 Gene3D G3DSA:1.10.101.10 143 201 3.1E-12 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS06445 c65481a3d3d528d6f373b201efc532d4 318 Gene3D G3DSA:1.10.101.10 260 315 1.5E-11 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS06445 c65481a3d3d528d6f373b201efc532d4 318 SUPERFAMILY SSF47090 142 200 1.1E-13 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS06445 c65481a3d3d528d6f373b201efc532d4 318 Pfam PF01471 Putative peptidoglycan binding domain 145 199 1.0E-10 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS06445 c65481a3d3d528d6f373b201efc532d4 318 Pfam PF01471 Putative peptidoglycan binding domain 260 312 7.6E-11 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS06445 c65481a3d3d528d6f373b201efc532d4 318 PANTHER PTHR30163 134 213 8.5E-12 T 14-09-2016 IPR011757 Lytic transglycosylase MltB AMK01_RS06445 c65481a3d3d528d6f373b201efc532d4 318 PANTHER PTHR30163:SF2 134 213 8.5E-12 T 14-09-2016 AMK01_RS01905 19cc572269405799e29377dd72184036 128 PANTHER PTHR21366 2 125 2.9E-69 T 14-09-2016 AMK01_RS01905 19cc572269405799e29377dd72184036 128 PANTHER PTHR21366:SF14 2 125 2.9E-69 T 14-09-2016 AMK01_RS01905 19cc572269405799e29377dd72184036 128 Gene3D G3DSA:3.10.180.10 8 125 2.4E-34 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS01905 19cc572269405799e29377dd72184036 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 3.6E-11 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS01905 19cc572269405799e29377dd72184036 128 SUPERFAMILY SSF54593 3 124 8.46E-27 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 14 313 2.5E-80 T 14-09-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 Gene3D G3DSA:3.40.190.10 127 225 3.3E-13 T 14-09-2016 AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 PANTHER PTHR30085:SF5 4 310 1.3E-167 T 14-09-2016 AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 Gene3D G3DSA:3.40.190.10 32 126 5.5E-16 T 14-09-2016 AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 Gene3D G3DSA:3.40.190.10 226 244 5.5E-16 T 14-09-2016 AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 SMART SM00062 35 264 2.1E-57 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 SUPERFAMILY SSF53850 26 255 5.67E-47 T 14-09-2016 AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 14-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 250 1.0E-27 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS09600 ace3dc1e6ab490b00c7adeca5f3c271c 341 PANTHER PTHR30085 4 310 1.3E-167 T 14-09-2016 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 182 197 4.4E-5 T 14-09-2016 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 4.4E-5 T 14-09-2016 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 Gene3D G3DSA:3.30.70.20 498 540 3.6E-4 T 14-09-2016 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 SUPERFAMILY SSF54373 215 310 2.98E-36 T 14-09-2016 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 451 551 6.1E-49 T 14-09-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 Gene3D G3DSA:3.50.50.60 15 53 4.1E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 Gene3D G3DSA:3.50.50.60 120 225 4.1E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 Gene3D G3DSA:3.50.50.60 311 452 4.1E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 Pfam PF13450 NAD(P)-binding Rossmann-like domain 19 62 1.4E-7 T 14-09-2016 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 SUPERFAMILY SSF51905 310 453 1.93E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 SUPERFAMILY SSF51905 9 213 1.93E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 SUPERFAMILY SSF54862 455 554 4.42E-29 T 14-09-2016 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 PANTHER PTHR10617 9 478 9.7E-242 T 14-09-2016 AMK01_RS06680 3a28ea5ce51fe8b477bfb0d6e666882e 554 PANTHER PTHR10617:SF107 9 478 9.7E-242 T 14-09-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 AMK01_RS04670 fbfea001be7fdbe39a5fad54a260adc0 83 PANTHER PTHR34137 1 66 1.1E-18 T 14-09-2016 AMK01_RS04670 fbfea001be7fdbe39a5fad54a260adc0 83 Gene3D G3DSA:1.10.287.1040 9 73 3.4E-25 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK01_RS04670 fbfea001be7fdbe39a5fad54a260adc0 83 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 13 73 15.816 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK01_RS04670 fbfea001be7fdbe39a5fad54a260adc0 83 Pfam PF02609 Exonuclease VII small subunit 14 65 2.2E-20 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK01_RS04670 fbfea001be7fdbe39a5fad54a260adc0 83 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 13 67 2.5E-23 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK01_RS04670 fbfea001be7fdbe39a5fad54a260adc0 83 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 13 53 2.0E-15 T 14-09-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK01_RS04670 fbfea001be7fdbe39a5fad54a260adc0 83 SUPERFAMILY SSF116842 8 69 3.27E-20 T 14-09-2016 AMK01_RS07955 a0158a96bd8bbbada0b5777932027fcc 278 SUPERFAMILY SSF103481 176 277 3.01E-12 T 14-09-2016 AMK01_RS07955 a0158a96bd8bbbada0b5777932027fcc 278 PANTHER PTHR22911 6 277 9.0E-68 T 14-09-2016 AMK01_RS07955 a0158a96bd8bbbada0b5777932027fcc 278 Pfam PF00892 EamA-like transporter family 143 275 1.4E-10 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS07955 a0158a96bd8bbbada0b5777932027fcc 278 SUPERFAMILY SSF103481 40 135 6.41E-10 T 14-09-2016 AMK01_RS07955 a0158a96bd8bbbada0b5777932027fcc 278 PANTHER PTHR22911:SF61 6 277 9.0E-68 T 14-09-2016 AMK01_RS02330 7a98a71657b5191aa28dc66abaf99488 312 PANTHER PTHR11351 34 285 2.0E-28 T 14-09-2016 AMK01_RS02330 7a98a71657b5191aa28dc66abaf99488 312 Pfam PF00487 Fatty acid desaturase 47 251 5.0E-7 T 14-09-2016 IPR005804 Fatty acid desaturase domain GO:0006629 AMK01_RS02330 7a98a71657b5191aa28dc66abaf99488 312 PANTHER PTHR11351:SF2 34 285 2.0E-28 T 14-09-2016 AMK01_RS07965 86f11337b9e4e438cc5a7db395518e62 142 Gene3D G3DSA:3.40.50.720 8 140 1.2E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07965 86f11337b9e4e438cc5a7db395518e62 142 SUPERFAMILY SSF51735 7 140 2.61E-40 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07965 86f11337b9e4e438cc5a7db395518e62 142 Pfam PF13380 CoA binding domain 19 137 1.0E-37 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AMK01_RS07965 86f11337b9e4e438cc5a7db395518e62 142 PANTHER PTHR33303 1 141 6.6E-47 T 14-09-2016 AMK01_RS07965 86f11337b9e4e438cc5a7db395518e62 142 SMART SM00881 15 111 2.9E-19 T 14-09-2016 IPR003781 CoA-binding GO:0048037 AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 PANTHER PTHR30537 1 298 1.7E-104 T 14-09-2016 AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 Pfam PF03466 LysR substrate binding domain 90 296 5.6E-45 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 Gene3D G3DSA:1.10.10.10 5 87 3.0E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.3E-15 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 Gene3D G3DSA:3.40.190.10 183 264 1.7E-26 T 14-09-2016 AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 Gene3D G3DSA:3.40.190.10 94 182 9.4E-20 T 14-09-2016 AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 SUPERFAMILY SSF46785 4 114 7.41E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 SUPERFAMILY SSF53850 92 297 9.15E-46 T 14-09-2016 AMK01_RS13745 dee9348b5dc8053b01bf3531ef326e37 298 PANTHER PTHR30537:SF5 1 298 1.7E-104 T 14-09-2016 AMK01_RS00790 0fcc03b616557e909683b10be8e5a05c 136 PANTHER PTHR23089 35 126 8.8E-18 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AMK01_RS00790 0fcc03b616557e909683b10be8e5a05c 136 Pfam PF01230 HIT domain 10 100 8.0E-15 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AMK01_RS00790 0fcc03b616557e909683b10be8e5a05c 136 Gene3D G3DSA:3.30.428.10 8 135 4.0E-32 T 14-09-2016 IPR011146 HIT-like domain GO:0003824 AMK01_RS00790 0fcc03b616557e909683b10be8e5a05c 136 SUPERFAMILY SSF54197 10 135 7.83E-34 T 14-09-2016 IPR011146 HIT-like domain GO:0003824 AMK01_RS00790 0fcc03b616557e909683b10be8e5a05c 136 PIRSF PIRSF000714 3 136 6.0E-47 T 14-09-2016 IPR026026 Histidine triad hydrolase, Hint-type AMK01_RS00790 0fcc03b616557e909683b10be8e5a05c 136 PANTHER PTHR23089:SF13 35 126 8.8E-18 T 14-09-2016 AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 SUPERFAMILY SSF52518 337 519 3.37E-65 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 14-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 Gene3D G3DSA:3.40.50.970 3 317 2.5E-123 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 SUPERFAMILY SSF52518 3 317 5.47E-116 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 SMART SM00861 350 522 1.7E-65 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 PANTHER PTHR11624:SF1 3 310 0.0 T 14-09-2016 AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 PANTHER PTHR11624:SF1 339 657 0.0 T 14-09-2016 AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 Pfam PF02780 Transketolase, C-terminal domain 544 649 1.8E-10 T 14-09-2016 IPR033248 Transketolase, C-terminal domain AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 ProSitePatterns PS00802 Transketolase signature 2. 463 479 - T 14-09-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 Pfam PF02779 Transketolase, pyrimidine binding domain 350 520 2.0E-42 T 14-09-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 Gene3D G3DSA:3.40.50.920 534 656 3.0E-41 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 654 3.3E-256 T 14-09-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 Gene3D G3DSA:3.40.50.970 322 525 1.6E-74 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 PANTHER PTHR11624 339 657 0.0 T 14-09-2016 IPR033247 Transketolase family AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 PANTHER PTHR11624 3 310 0.0 T 14-09-2016 IPR033247 Transketolase family AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 SUPERFAMILY SSF52922 530 656 8.25E-40 T 14-09-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK01_RS18050 cc66c4758cdbff3516a572a7387ee856 657 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 329 1.6E-141 T 14-09-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK01_RS14910 37bef42612587320045c660875301e90 164 Hamap MF_00761 UPF0303 protein . 4 154 32.769 T 14-09-2016 IPR010371 Uncharacterised protein family UPF0303 AMK01_RS14910 37bef42612587320045c660875301e90 164 PIRSF PIRSF008757 1 162 2.9E-58 T 14-09-2016 IPR010371 Uncharacterised protein family UPF0303 AMK01_RS14910 37bef42612587320045c660875301e90 164 SUPERFAMILY SSF143744 13 151 5.89E-26 T 14-09-2016 AMK01_RS14910 37bef42612587320045c660875301e90 164 PANTHER PTHR28255 1 163 3.2E-41 T 14-09-2016 AMK01_RS14910 37bef42612587320045c660875301e90 164 Pfam PF03928 Haem-degrading 22 148 4.5E-31 T 14-09-2016 IPR005624 Haem-degrading AMK01_RS14910 37bef42612587320045c660875301e90 164 PANTHER PTHR28255:SF1 1 163 3.2E-41 T 14-09-2016 AMK01_RS05140 933b5a1267c4c33a4f8577d695c9cc74 302 SUPERFAMILY SSF56281 17 287 1.76E-54 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS05140 933b5a1267c4c33a4f8577d695c9cc74 302 Gene3D G3DSA:3.60.15.10 12 242 1.6E-45 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS05140 933b5a1267c4c33a4f8577d695c9cc74 302 PANTHER PTHR23131:SF4 20 293 4.2E-67 T 14-09-2016 AMK01_RS05140 933b5a1267c4c33a4f8577d695c9cc74 302 PANTHER PTHR23131 20 293 4.2E-67 T 14-09-2016 AMK01_RS05140 933b5a1267c4c33a4f8577d695c9cc74 302 SMART SM00849 39 215 6.5E-24 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS05140 933b5a1267c4c33a4f8577d695c9cc74 302 Pfam PF00753 Metallo-beta-lactamase superfamily 37 215 1.6E-21 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS14110 590935e9a5ab1fabde6ac39744d2d2b8 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 21 197 5.6E-22 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS14110 590935e9a5ab1fabde6ac39744d2d2b8 238 PANTHER PTHR18901:SF9 15 199 1.8E-40 T 14-09-2016 AMK01_RS14110 590935e9a5ab1fabde6ac39744d2d2b8 238 Gene3D G3DSA:1.10.150.240 34 98 1.7E-6 T 14-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK01_RS14110 590935e9a5ab1fabde6ac39744d2d2b8 238 SUPERFAMILY SSF56784 18 232 3.48E-49 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS14110 590935e9a5ab1fabde6ac39744d2d2b8 238 PANTHER PTHR18901 15 199 1.8E-40 T 14-09-2016 AMK01_RS14110 590935e9a5ab1fabde6ac39744d2d2b8 238 Gene3D G3DSA:3.40.50.1000 101 233 1.3E-37 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS14110 590935e9a5ab1fabde6ac39744d2d2b8 238 Gene3D G3DSA:3.40.50.1000 16 33 1.3E-37 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS14110 590935e9a5ab1fabde6ac39744d2d2b8 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 197 1.9E-13 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS06540 a18c4a62350ef6d94d1273b10604b75d 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 8.4E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS06540 a18c4a62350ef6d94d1273b10604b75d 186 Gene3D G3DSA:1.10.357.10 10 181 1.7E-25 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS06540 a18c4a62350ef6d94d1273b10604b75d 186 PANTHER PTHR30055 7 166 1.5E-16 T 14-09-2016 AMK01_RS06540 a18c4a62350ef6d94d1273b10604b75d 186 SUPERFAMILY SSF46689 7 73 4.99E-13 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06540 a18c4a62350ef6d94d1273b10604b75d 186 SUPERFAMILY SSF48498 76 181 4.62E-14 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS13605 c3167a98f21a9a5bf02ccf167079f5f4 112 SUPERFAMILY SSF52091 32 106 3.34E-9 T 14-09-2016 IPR002645 STAS domain AMK01_RS13605 c3167a98f21a9a5bf02ccf167079f5f4 112 Gene3D G3DSA:3.30.750.24 38 85 6.7E-7 T 14-09-2016 IPR002645 STAS domain AMK01_RS01870 c77811c303fad67d8abf5b3ec0d2c6db 429 SUPERFAMILY SSF103473 44 416 2.88E-38 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS01870 c77811c303fad67d8abf5b3ec0d2c6db 429 PANTHER PTHR23523:SF2 26 428 1.0E-133 T 14-09-2016 AMK01_RS01870 c77811c303fad67d8abf5b3ec0d2c6db 429 PANTHER PTHR23523 26 428 1.0E-133 T 14-09-2016 AMK01_RS01870 c77811c303fad67d8abf5b3ec0d2c6db 429 Pfam PF07690 Major Facilitator Superfamily 59 381 2.0E-17 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS01870 c77811c303fad67d8abf5b3ec0d2c6db 429 Gene3D G3DSA:1.20.1250.20 48 216 5.9E-14 T 14-09-2016 AMK01_RS01870 c77811c303fad67d8abf5b3ec0d2c6db 429 Gene3D G3DSA:1.20.1250.20 235 407 7.8E-15 T 14-09-2016 AMK01_RS17360 d971af772024ccfc6ffd31c12d3acb49 340 SUPERFAMILY SSF53697 26 337 5.01E-27 T 14-09-2016 AMK01_RS17360 d971af772024ccfc6ffd31c12d3acb49 340 Gene3D G3DSA:3.40.50.10490 41 172 1.1E-10 T 14-09-2016 AMK01_RS17360 d971af772024ccfc6ffd31c12d3acb49 340 Pfam PF01380 SIS domain 203 296 1.2E-7 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS17360 d971af772024ccfc6ffd31c12d3acb49 340 Gene3D G3DSA:3.40.50.10490 190 338 6.1E-12 T 14-09-2016 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-09-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 Gene3D G3DSA:1.10.560.10 367 519 1.2E-45 T 14-09-2016 IPR027413 GroEL-like equatorial domain AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 SUPERFAMILY SSF48592 406 522 1.15E-79 T 14-09-2016 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 SUPERFAMILY SSF48592 7 134 1.15E-79 T 14-09-2016 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 Gene3D G3DSA:3.50.7.10 189 366 2.8E-104 T 14-09-2016 IPR027409 GroEL-like apical domain AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 PRINTS PR00298 60kDa chaperonin signature 27 53 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 PRINTS PR00298 60kDa chaperonin signature 83 110 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-74 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 3.5E-264 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 1.1E-103 T 14-09-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 PANTHER PTHR11353 2 540 3.8E-262 T 14-09-2016 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 SUPERFAMILY SSF52029 184 376 2.88E-87 T 14-09-2016 IPR027409 GroEL-like apical domain AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 Gene3D G3DSA:1.10.560.10 3 188 2.0E-47 T 14-09-2016 IPR027413 GroEL-like equatorial domain AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 SUPERFAMILY SSF54849 138 196 7.1E-22 T 14-09-2016 AMK01_RS06370 e16ab8e11e4d3cf1f61c0fa327ae86cc 542 Hamap MF_00600 60 kDa chaperonin [groL]. 2 540 42.525 T 14-09-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK01_RS06815 7c6f68069506c2a5c42f3476df5af6c5 288 SUPERFAMILY SSF53850 96 277 4.71E-9 T 14-09-2016 AMK01_RS06815 7c6f68069506c2a5c42f3476df5af6c5 288 PANTHER PTHR30537 1 275 2.1E-32 T 14-09-2016 AMK01_RS06815 7c6f68069506c2a5c42f3476df5af6c5 288 PANTHER PTHR30537:SF3 1 275 2.1E-32 T 14-09-2016 AMK01_RS06815 7c6f68069506c2a5c42f3476df5af6c5 288 Gene3D G3DSA:1.10.10.10 5 81 6.5E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06815 7c6f68069506c2a5c42f3476df5af6c5 288 SUPERFAMILY SSF46785 5 106 3.89E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06815 7c6f68069506c2a5c42f3476df5af6c5 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.7E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS10805 8b4d9a7d964b66ee23d637d9c443a7b6 268 PANTHER PTHR30348:SF7 3 221 2.2E-114 T 14-09-2016 AMK01_RS10805 8b4d9a7d964b66ee23d637d9c443a7b6 268 PANTHER PTHR30348 240 266 2.2E-114 T 14-09-2016 AMK01_RS10805 8b4d9a7d964b66ee23d637d9c443a7b6 268 Pfam PF01904 Protein of unknown function DUF72 24 264 8.6E-57 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS10805 8b4d9a7d964b66ee23d637d9c443a7b6 268 SUPERFAMILY SSF117396 7 266 1.09E-70 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS10805 8b4d9a7d964b66ee23d637d9c443a7b6 268 PANTHER PTHR30348 3 221 2.2E-114 T 14-09-2016 AMK01_RS10805 8b4d9a7d964b66ee23d637d9c443a7b6 268 Gene3D G3DSA:3.20.20.410 2 266 1.4E-75 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS10805 8b4d9a7d964b66ee23d637d9c443a7b6 268 PANTHER PTHR30348:SF7 240 266 2.2E-114 T 14-09-2016 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 168 340 3.7E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 SUPERFAMILY SSF161098 16 62 3.19E-67 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 SUPERFAMILY SSF161098 127 349 3.19E-67 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 PANTHER PTHR32243 128 349 3.1E-92 T 14-09-2016 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 PANTHER PTHR32243 10 63 3.1E-92 T 14-09-2016 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 PANTHER PTHR32243:SF31 128 349 3.1E-92 T 14-09-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 PANTHER PTHR32243:SF31 10 63 3.1E-92 T 14-09-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 Gene3D G3DSA:1.10.3720.10 126 337 9.4E-66 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10615 88854fdfdbf85d818c82596f053f10d6 349 Gene3D G3DSA:1.10.3720.10 11 61 9.4E-66 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03760 a55bba26934923ac1335d4664885ae9c 289 Gene3D G3DSA:1.10.10.10 3 82 1.1E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03760 a55bba26934923ac1335d4664885ae9c 289 PANTHER PTHR30537 1 281 2.3E-32 T 14-09-2016 AMK01_RS03760 a55bba26934923ac1335d4664885ae9c 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.8E-11 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS03760 a55bba26934923ac1335d4664885ae9c 289 SUPERFAMILY SSF46785 5 105 4.99E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03760 a55bba26934923ac1335d4664885ae9c 289 Pfam PF03466 LysR substrate binding domain 120 271 1.8E-6 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS03760 a55bba26934923ac1335d4664885ae9c 289 SUPERFAMILY SSF53850 125 277 7.06E-11 T 14-09-2016 AMK01_RS03760 a55bba26934923ac1335d4664885ae9c 289 PANTHER PTHR30537:SF3 1 281 2.3E-32 T 14-09-2016 AMK01_RS18480 bc4bdaf4d15af9362c28d815355d508d 505 PANTHER PTHR35342 2 504 0.0 T 14-09-2016 AMK01_RS18480 bc4bdaf4d15af9362c28d815355d508d 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 2.3E-142 T 14-09-2016 IPR002823 Protein of unknown function DUF112, transmembrane AMK01_RS18480 bc4bdaf4d15af9362c28d815355d508d 505 PANTHER PTHR35342:SF3 2 504 0.0 T 14-09-2016 AMK01_RS00425 414aa286a3dca85da45c142314dbb6a2 428 SUPERFAMILY SSF53850 29 424 1.96E-51 T 14-09-2016 AMK01_RS00425 414aa286a3dca85da45c142314dbb6a2 428 PANTHER PTHR30061 1 427 4.1E-56 T 14-09-2016 AMK01_RS00425 414aa286a3dca85da45c142314dbb6a2 428 Gene3D G3DSA:3.40.190.10 151 321 7.6E-17 T 14-09-2016 AMK01_RS00425 414aa286a3dca85da45c142314dbb6a2 428 Pfam PF13416 Bacterial extracellular solute-binding protein 55 336 3.6E-23 T 14-09-2016 AMK01_RS00425 414aa286a3dca85da45c142314dbb6a2 428 Gene3D G3DSA:3.40.190.10 322 345 6.6E-29 T 14-09-2016 AMK01_RS00425 414aa286a3dca85da45c142314dbb6a2 428 Gene3D G3DSA:3.40.190.10 31 145 6.6E-29 T 14-09-2016 AMK01_RS00425 414aa286a3dca85da45c142314dbb6a2 428 PANTHER PTHR30061:SF1 1 427 4.1E-56 T 14-09-2016 AMK01_RS00470 a2e66cf9c77f6b61bc65fd4e9e3abbff 69 Gene3D G3DSA:1.20.5.300 6 49 1.0E-8 T 14-09-2016 AMK01_RS00470 a2e66cf9c77f6b61bc65fd4e9e3abbff 69 Hamap MF_00715 Protein SlyX [slyX]. 3 69 14.302 T 14-09-2016 IPR007236 SlyX AMK01_RS00470 a2e66cf9c77f6b61bc65fd4e9e3abbff 69 Pfam PF04102 SlyX 6 69 2.1E-19 T 14-09-2016 IPR007236 SlyX AMK01_RS01545 5efa051cb0dc9243f06b9c30c3f496d6 124 Pfam PF04138 GtrA-like protein 6 64 1.6E-11 T 14-09-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMK01_RS01545 5efa051cb0dc9243f06b9c30c3f496d6 124 Pfam PF04138 GtrA-like protein 70 123 8.3E-10 T 14-09-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 PANTHER PTHR14359 1 401 6.8E-164 T 14-09-2016 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 Pfam PF02441 Flavoprotein 6 134 5.9E-34 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 Gene3D G3DSA:3.40.50.10300 189 400 8.6E-83 T 14-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 PANTHER PTHR14359:SF20 1 401 6.8E-164 T 14-09-2016 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 Gene3D G3DSA:3.40.50.1950 3 188 2.3E-62 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 394 1.1E-122 T 14-09-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 SUPERFAMILY SSF52507 3 180 1.31E-58 T 14-09-2016 IPR003382 Flavoprotein GO:0003824 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 SUPERFAMILY SSF102645 186 400 1.01E-73 T 14-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK01_RS01885 69776bc1f6aead2d849886e107585ef5 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 372 2.8E-69 T 14-09-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 AMK01_RS05190 15abfe1aba550806692511f53e41b7b8 255 PANTHER PTHR24320 4 251 5.2E-38 T 14-09-2016 AMK01_RS05190 15abfe1aba550806692511f53e41b7b8 255 SUPERFAMILY SSF51735 2 222 6.88E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05190 15abfe1aba550806692511f53e41b7b8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.2E-13 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05190 15abfe1aba550806692511f53e41b7b8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.2E-13 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05190 15abfe1aba550806692511f53e41b7b8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.2E-13 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05190 15abfe1aba550806692511f53e41b7b8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-13 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05190 15abfe1aba550806692511f53e41b7b8 255 Gene3D G3DSA:3.40.50.720 4 223 3.2E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05190 15abfe1aba550806692511f53e41b7b8 255 Pfam PF00106 short chain dehydrogenase 4 116 5.1E-15 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06955 fe54d2540b24eaad9d5ef67f2ef319ea 347 Pfam PF00535 Glycosyl transferase family 2 5 113 1.3E-27 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS06955 fe54d2540b24eaad9d5ef67f2ef319ea 347 Gene3D G3DSA:3.90.550.10 3 219 1.2E-42 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS06955 fe54d2540b24eaad9d5ef67f2ef319ea 347 PANTHER PTHR22916 3 334 1.8E-41 T 14-09-2016 AMK01_RS06955 fe54d2540b24eaad9d5ef67f2ef319ea 347 SUPERFAMILY SSF53448 4 225 1.35E-47 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 Pfam PF00158 Sigma-54 interaction domain 153 319 7.4E-67 T 14-09-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 SMART SM00448 11 124 2.6E-34 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 PANTHER PTHR32071 12 513 5.2E-181 T 14-09-2016 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 239 254 - T 14-09-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 14-09-2016 IPR025944 Sigma-54 interaction domain, conserved site AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 Pfam PF02954 Bacterial regulatory protein, Fis family 461 501 2.6E-12 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 177 190 - T 14-09-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 Gene3D G3DSA:3.40.50.300 150 325 2.4E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 SUPERFAMILY SSF46689 449 504 3.78E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 Gene3D G3DSA:1.10.10.60 440 504 4.2E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 SUPERFAMILY SSF52540 152 397 2.0E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 Pfam PF00072 Response regulator receiver domain 13 124 7.4E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 Gene3D G3DSA:1.10.8.60 326 399 5.9E-21 T 14-09-2016 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 SMART SM00382 173 317 0.0012 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 SUPERFAMILY SSF52172 12 195 2.56E-39 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 Gene3D G3DSA:3.40.50.2300 12 135 2.4E-35 T 14-09-2016 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 484 504 7.0E-9 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS18310 94193252b3efe434f7d41f3ef6295b1b 513 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 484 7.0E-9 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SMART SM00028 823 856 43.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SMART SM00028 1034 1067 400.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SMART SM00028 913 945 310.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SMART SM00028 994 1027 0.87 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SMART SM00028 743 776 150.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SMART SM00028 873 906 17.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Pfam PF13191 AAA ATPase domain 276 467 1.0E-18 T 14-09-2016 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Gene3D G3DSA:1.25.40.10 699 852 3.2E-13 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SUPERFAMILY SSF48452 697 856 1.38E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Gene3D G3DSA:1.25.40.10 873 1063 2.4E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SMART SM00044 41 236 1.6E-19 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 PANTHER PTHR16305 72 1080 5.1E-153 T 14-09-2016 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 75 247 5.1E-32 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 PANTHER PTHR16305:SF28 72 1080 5.1E-153 T 14-09-2016 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Gene3D G3DSA:3.40.50.300 408 475 4.6E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Gene3D G3DSA:3.40.50.300 273 340 4.6E-8 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SUPERFAMILY SSF52540 275 363 9.64E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SUPERFAMILY SSF52540 422 586 9.64E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Pfam PF12773 Double zinc ribbon 3 46 1.9E-7 T 14-09-2016 IPR025874 Double zinc ribbon AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SUPERFAMILY SSF55073 73 254 1.51E-53 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Pfam PF13424 Tetratricopeptide repeat 957 1026 3.4E-7 T 14-09-2016 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 Gene3D G3DSA:3.30.70.1230 74 248 5.6E-43 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SUPERFAMILY SSF48452 822 936 1.52E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10960 ec2adb700a1a9e6b32ce0a2f163565e9 1081 SUPERFAMILY SSF48452 985 1062 1.52E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS13565 3a19a1e623b6ae793326896171210947 314 PANTHER PTHR30036 3 313 5.6E-47 T 14-09-2016 AMK01_RS13565 3a19a1e623b6ae793326896171210947 314 Pfam PF13407 Periplasmic binding protein domain 23 289 2.4E-55 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS13565 3a19a1e623b6ae793326896171210947 314 SUPERFAMILY SSF53822 22 312 2.2E-77 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS13565 3a19a1e623b6ae793326896171210947 314 Gene3D G3DSA:3.40.50.2300 21 140 3.7E-28 T 14-09-2016 AMK01_RS13565 3a19a1e623b6ae793326896171210947 314 Gene3D G3DSA:3.40.50.2300 141 310 3.6E-48 T 14-09-2016 AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 SUPERFAMILY SSF51735 141 300 1.12E-33 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 SUPERFAMILY SSF50129 3 173 1.25E-45 T 14-09-2016 IPR011032 GroES-like AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 Gene3D G3DSA:3.90.180.10 2 171 2.7E-55 T 14-09-2016 IPR011032 GroES-like AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 Pfam PF00107 Zinc-binding dehydrogenase 178 300 1.7E-19 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 PANTHER PTHR11695 16 345 1.8E-110 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 Gene3D G3DSA:3.40.50.720 172 286 5.3E-23 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 PANTHER PTHR11695:SF498 16 345 1.8E-110 T 14-09-2016 AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 SMART SM00829 11 336 1.4E-4 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS09885 ff81450b343f4ae38f1711662169e4eb 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 136 5.3E-27 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS09720 3a17f24c36e0ba5085112f559f52f060 276 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 216 242 - T 14-09-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 AMK01_RS09720 3a17f24c36e0ba5085112f559f52f060 276 PANTHER PTHR13773 2 258 2.1E-50 T 14-09-2016 AMK01_RS09720 3a17f24c36e0ba5085112f559f52f060 276 PANTHER PTHR13773:SF0 2 258 2.1E-50 T 14-09-2016 AMK01_RS09720 3a17f24c36e0ba5085112f559f52f060 276 Pfam PF01148 Cytidylyltransferase family 6 255 2.0E-55 T 14-09-2016 AMK01_RS09925 ec90b1a4b5b05db4f282ab9e1ca94a50 442 PANTHER PTHR30085:SF3 225 442 1.7E-88 T 14-09-2016 AMK01_RS09925 ec90b1a4b5b05db4f282ab9e1ca94a50 442 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 234 329 7.9E-15 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS09925 ec90b1a4b5b05db4f282ab9e1ca94a50 442 PANTHER PTHR30085 225 442 1.7E-88 T 14-09-2016 AMK01_RS09925 ec90b1a4b5b05db4f282ab9e1ca94a50 442 SUPERFAMILY SSF161098 233 429 1.1E-35 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09925 ec90b1a4b5b05db4f282ab9e1ca94a50 442 PANTHER PTHR30085:SF3 82 170 1.7E-88 T 14-09-2016 AMK01_RS09925 ec90b1a4b5b05db4f282ab9e1ca94a50 442 PANTHER PTHR30085 82 170 1.7E-88 T 14-09-2016 AMK01_RS09925 ec90b1a4b5b05db4f282ab9e1ca94a50 442 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 251 438 3.9E-23 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09925 ec90b1a4b5b05db4f282ab9e1ca94a50 442 Gene3D G3DSA:1.10.3720.10 234 438 8.7E-41 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 Gene3D G3DSA:3.40.630.10 147 459 3.5E-114 T 14-09-2016 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 152 454 2.9E-101 T 14-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 Gene3D G3DSA:3.40.220.10 102 130 7.1E-4 T 14-09-2016 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 PRINTS PR00481 Cytosol aminopeptidase signature 226 243 5.9E-45 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 PRINTS PR00481 Cytosol aminopeptidase signature 335 350 5.9E-45 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 PRINTS PR00481 Cytosol aminopeptidase signature 248 269 5.9E-45 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 5.9E-45 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 PRINTS PR00481 Cytosol aminopeptidase signature 307 327 5.9E-45 T 14-09-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 PANTHER PTHR11963:SF13 100 458 1.4E-140 T 14-09-2016 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 PANTHER PTHR11963 100 458 1.4E-140 T 14-09-2016 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 311 318 - T 14-09-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 SUPERFAMILY SSF52949 37 128 1.82E-5 T 14-09-2016 AMK01_RS01220 65e3b2f6ee52a1eaeddd79e5be6316f9 463 SUPERFAMILY SSF53187 148 459 1.6E-105 T 14-09-2016 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 Pfam PF00459 Inositol monophosphatase family 16 260 8.7E-45 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 Gene3D G3DSA:3.30.540.10 15 173 8.7E-39 T 14-09-2016 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 PANTHER PTHR20854 17 263 2.6E-41 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 141 164 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 220 244 2.2E-18 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 SUPERFAMILY SSF56655 17 272 1.1E-64 T 14-09-2016 AMK01_RS11825 119391a02019aff89e3079211ccd52ec 275 Gene3D G3DSA:3.40.190.80 179 260 6.5E-15 T 14-09-2016 AMK01_RS07110 20c1e8fc29c579806ee118eaf11dcf25 161 Gene3D G3DSA:3.40.50.2300 42 159 1.6E-15 T 14-09-2016 AMK01_RS07110 20c1e8fc29c579806ee118eaf11dcf25 161 SMART SM00448 45 156 5.8E-5 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS07110 20c1e8fc29c579806ee118eaf11dcf25 161 Pfam PF00072 Response regulator receiver domain 47 149 1.9E-6 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS07110 20c1e8fc29c579806ee118eaf11dcf25 161 SUPERFAMILY SSF52172 42 158 9.96E-18 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS18290 0bd7e7e38cdf9c91bc9c56aae00643fd 262 Pfam PF05013 N-formylglutamate amidohydrolase 18 223 9.5E-38 T 14-09-2016 IPR007709 N-formylglutamate amidohydrolase AMK01_RS18290 0bd7e7e38cdf9c91bc9c56aae00643fd 262 SUPERFAMILY SSF53187 2 244 4.39E-70 T 14-09-2016 AMK01_RS18290 0bd7e7e38cdf9c91bc9c56aae00643fd 262 Gene3D G3DSA:3.40.630.40 7 243 1.6E-78 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK01_RS18290 0bd7e7e38cdf9c91bc9c56aae00643fd 262 PIRSF PIRSF029730 1 255 1.0E-100 T 14-09-2016 IPR011227 Uncharacterised conserved protein UCP029730 AMK01_RS10885 3ecc20c6150d9cbae23fa4b5398d7581 177 SUPERFAMILY SSF55811 35 162 1.96E-16 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS10885 3ecc20c6150d9cbae23fa4b5398d7581 177 PANTHER PTHR12629 39 165 2.2E-16 T 14-09-2016 AMK01_RS10885 3ecc20c6150d9cbae23fa4b5398d7581 177 PANTHER PTHR12629:SF0 39 165 2.2E-16 T 14-09-2016 AMK01_RS10885 3ecc20c6150d9cbae23fa4b5398d7581 177 Gene3D G3DSA:3.90.79.10 34 162 5.9E-15 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS10885 3ecc20c6150d9cbae23fa4b5398d7581 177 Pfam PF00293 NUDIX domain 39 153 1.5E-7 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 13 165 15.433 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 Pfam PF01252 Signal peptidase (SPase) II 22 158 4.8E-32 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 PANTHER PTHR33695:SF1 19 165 5.3E-42 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 ProSitePatterns PS00855 Signal peptidases II signature. 107 119 - T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 TIGRFAM TIGR00077 lspA: signal peptidase II 18 164 1.2E-37 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 104 119 3.7E-16 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 140 156 3.7E-16 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 59 67 3.7E-16 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS02160 efe1042eb4581d03fb3076b75858bbb3 167 PANTHER PTHR33695 19 165 5.3E-42 T 14-09-2016 AMK01_RS02605 c4bbba5875c39be20e5b30f830a75685 314 Pfam PF00005 ABC transporter 19 165 3.9E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS02605 c4bbba5875c39be20e5b30f830a75685 314 Gene3D G3DSA:3.40.50.300 2 238 3.7E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02605 c4bbba5875c39be20e5b30f830a75685 314 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS02605 c4bbba5875c39be20e5b30f830a75685 314 PANTHER PTHR24220:SF434 5 312 5.6E-126 T 14-09-2016 AMK01_RS02605 c4bbba5875c39be20e5b30f830a75685 314 SUPERFAMILY SSF52540 3 242 2.46E-76 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02605 c4bbba5875c39be20e5b30f830a75685 314 SMART SM00382 28 215 2.5E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS02605 c4bbba5875c39be20e5b30f830a75685 314 PANTHER PTHR24220 5 312 5.6E-126 T 14-09-2016 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 74 97 3.6E-62 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 99 117 3.6E-62 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 154 173 3.6E-62 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 25 46 3.6E-62 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 51 68 3.6E-62 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 3.6E-62 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 4 215 3.9E-86 T 14-09-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 Pfam PF03379 CcmB protein 1 215 3.9E-84 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PIRSF PIRSF002764 1 219 3.2E-65 T 14-09-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PANTHER PTHR30070 1 219 1.7E-52 T 14-09-2016 AMK01_RS20275 ef9cb64e0c7cb11b1b831d5741556ae3 219 PANTHER PTHR30070:SF1 1 219 1.7E-52 T 14-09-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMK01_RS13855 24055b3a98aa31d6c20e6b54ece4f782 176 SUPERFAMILY SSF51161 20 170 4.85E-47 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS13855 24055b3a98aa31d6c20e6b54ece4f782 176 Gene3D G3DSA:2.160.10.10 20 170 2.9E-47 T 14-09-2016 AMK01_RS13855 24055b3a98aa31d6c20e6b54ece4f782 176 PANTHER PTHR13061 1 173 3.9E-60 T 14-09-2016 AMK01_RS13855 24055b3a98aa31d6c20e6b54ece4f782 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 124 3.9E-9 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS13855 24055b3a98aa31d6c20e6b54ece4f782 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 20 47 6.5E-4 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS00775 aa23f7aa7d5f59da312e568c2e29af73 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 1.5E-26 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK01_RS00775 aa23f7aa7d5f59da312e568c2e29af73 107 Gene3D G3DSA:3.30.1310.10 1 107 4.0E-41 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK01_RS00775 aa23f7aa7d5f59da312e568c2e29af73 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 21.883 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK01_RS00775 aa23f7aa7d5f59da312e568c2e29af73 107 PANTHER PTHR33449:SF1 1 107 1.4E-37 T 14-09-2016 AMK01_RS00775 aa23f7aa7d5f59da312e568c2e29af73 107 PIRSF PIRSF004555 1 107 6.1E-34 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK01_RS00775 aa23f7aa7d5f59da312e568c2e29af73 107 PANTHER PTHR33449 1 107 1.4E-37 T 14-09-2016 AMK01_RS00775 aa23f7aa7d5f59da312e568c2e29af73 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 6.3E-32 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK01_RS00775 aa23f7aa7d5f59da312e568c2e29af73 107 SUPERFAMILY SSF82607 8 101 1.96E-30 T 14-09-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK01_RS10910 3d0b335c670eb9c9028b7c76c3a54a10 330 SUPERFAMILY SSF53850 17 310 1.45E-67 T 14-09-2016 AMK01_RS10910 3d0b335c670eb9c9028b7c76c3a54a10 330 Gene3D G3DSA:3.40.190.10 120 256 2.3E-39 T 14-09-2016 AMK01_RS10910 3d0b335c670eb9c9028b7c76c3a54a10 330 Gene3D G3DSA:3.40.190.10 257 309 2.8E-30 T 14-09-2016 AMK01_RS10910 3d0b335c670eb9c9028b7c76c3a54a10 330 Gene3D G3DSA:3.40.190.10 5 119 2.8E-30 T 14-09-2016 AMK01_RS10910 3d0b335c670eb9c9028b7c76c3a54a10 330 PANTHER PTHR30006:SF2 14 330 2.8E-68 T 14-09-2016 AMK01_RS10910 3d0b335c670eb9c9028b7c76c3a54a10 330 PIRSF PIRSF002825 5 326 7.8E-58 T 14-09-2016 IPR026045 Ferric binding protein AMK01_RS10910 3d0b335c670eb9c9028b7c76c3a54a10 330 Pfam PF13343 Bacterial extracellular solute-binding protein 64 307 3.5E-32 T 14-09-2016 AMK01_RS10910 3d0b335c670eb9c9028b7c76c3a54a10 330 PANTHER PTHR30006 14 330 2.8E-68 T 14-09-2016 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 PANTHER PTHR30173:SF7 17 381 4.2E-159 T 14-09-2016 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 Pfam PF08281 Sigma-70, region 4 114 164 1.2E-8 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 Gene3D G3DSA:1.10.1740.10 14 96 5.4E-11 T 14-09-2016 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 167 1.7E-16 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 PANTHER PTHR30173 17 381 4.2E-159 T 14-09-2016 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 Gene3D G3DSA:1.10.10.10 108 167 2.7E-11 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 SUPERFAMILY SSF88659 107 166 9.59E-10 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 Gene3D G3DSA:1.25.40.10 223 412 5.8E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 SUPERFAMILY SSF48452 316 403 6.73E-6 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 Pfam PF04542 Sigma-70 region 2 15 77 2.5E-11 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15870 8be189637f3901b8cd794d0fc34de88f 419 SUPERFAMILY SSF88946 11 95 5.49E-13 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS15400 7e852d3e0acbe366f401fd1050d1f06f 264 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 29 259 5.5E-69 T 14-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMK01_RS15400 7e852d3e0acbe366f401fd1050d1f06f 264 Gene3D G3DSA:3.60.140.10 20 262 1.4E-87 T 14-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMK01_RS15400 7e852d3e0acbe366f401fd1050d1f06f 264 PANTHER PTHR30616 23 263 5.5E-81 T 14-09-2016 AMK01_RS15400 7e852d3e0acbe366f401fd1050d1f06f 264 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 39 248 2.5E-49 T 14-09-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMK01_RS15400 7e852d3e0acbe366f401fd1050d1f06f 264 SUPERFAMILY SSF64438 21 261 2.93E-85 T 14-09-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 Gene3D G3DSA:1.10.357.20 297 468 1.8E-52 T 14-09-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 SMART SM00924 54 157 1.6E-31 T 14-09-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 Pfam PF01769 Divalent cation transporter 340 462 2.8E-26 T 14-09-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 PANTHER PTHR41394 292 456 3.5E-40 T 14-09-2016 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 SUPERFAMILY SSF158791 29 154 7.72E-28 T 14-09-2016 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 SMART SM00116 164 217 14.0 T 14-09-2016 IPR000644 CBS domain AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 SMART SM00116 232 276 3.6E-5 T 14-09-2016 IPR000644 CBS domain AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 Pfam PF03448 MgtE intracellular N domain 54 154 8.2E-24 T 14-09-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 TIGRFAM TIGR00400 mgtE: magnesium transporter 50 469 9.5E-94 T 14-09-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 Gene3D G3DSA:3.10.580.10 150 282 4.2E-20 T 14-09-2016 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 SUPERFAMILY SSF54631 157 291 9.35E-30 T 14-09-2016 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 SUPERFAMILY SSF161093 296 468 6.93E-50 T 14-09-2016 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 PANTHER PTHR41394:SF1 292 456 3.5E-40 T 14-09-2016 AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 Pfam PF00571 CBS domain 161 214 1.2E-4 T 14-09-2016 IPR000644 CBS domain AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 Pfam PF00571 CBS domain 222 276 3.5E-8 T 14-09-2016 IPR000644 CBS domain AMK01_RS11365 186eeffba4f8999e10475f37a66a2d81 470 Gene3D G3DSA:1.25.60.10 26 149 1.3E-27 T 14-09-2016 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 SUPERFAMILY SSF53649 3 116 4.71E-75 T 14-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 SUPERFAMILY SSF53649 236 406 4.71E-75 T 14-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 PIRSF PIRSF001491 1 406 1.4E-154 T 14-09-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 Gene3D G3DSA:3.40.720.10 239 406 2.3E-73 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 Gene3D G3DSA:3.40.720.10 2 115 2.3E-73 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 PANTHER PTHR21110:SF0 2 406 4.5E-132 T 14-09-2016 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 SUPERFAMILY SSF143856 119 235 2.62E-47 T 14-09-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 Gene3D G3DSA:3.30.70.1250 116 235 4.2E-48 T 14-09-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 Pfam PF01676 Metalloenzyme superfamily 3 397 3.6E-37 T 14-09-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 52.929 T 14-09-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 PANTHER PTHR21110 2 406 4.5E-132 T 14-09-2016 AMK01_RS01145 c059c13cdbbca0eb8e5e32dcda38e320 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 402 2.5E-141 T 14-09-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK01_RS21085 89178ad8fa78aacc43ef2f76b65c5e87 291 SUPERFAMILY SSF53613 8 282 7.37E-57 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS21085 89178ad8fa78aacc43ef2f76b65c5e87 291 Gene3D G3DSA:3.40.1190.20 8 280 3.5E-62 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS21085 89178ad8fa78aacc43ef2f76b65c5e87 291 Pfam PF08543 Phosphomethylpyrimidine kinase 99 259 3.6E-13 T 14-09-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 AMK01_RS21085 89178ad8fa78aacc43ef2f76b65c5e87 291 PANTHER PTHR10534 9 287 1.2E-56 T 14-09-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS21085 89178ad8fa78aacc43ef2f76b65c5e87 291 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 9 275 5.1E-48 T 14-09-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 144 157 8.9E-11 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 134 8.9E-11 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 8.9E-11 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 SMART SM00936 277 367 2.9E-19 T 14-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 PANTHER PTHR21581 32 393 5.7E-73 T 14-09-2016 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 Gene3D G3DSA:2.60.410.10 277 367 7.5E-15 T 14-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 SUPERFAMILY SSF56601 1 275 1.31E-62 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 277 366 1.6E-14 T 14-09-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 SUPERFAMILY SSF69189 277 369 5.49E-17 T 14-09-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 251 3.3E-51 T 14-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 PANTHER PTHR21581:SF3 32 393 5.7E-73 T 14-09-2016 AMK01_RS11075 4b86d1e15133d5f6287d9e06e943598c 397 Gene3D G3DSA:3.40.710.10 27 274 1.1E-69 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS12800 9e0bd39bd6914da4418284db09418813 160 PANTHER PTHR30437:SF6 1 159 3.2E-50 T 14-09-2016 AMK01_RS12800 9e0bd39bd6914da4418284db09418813 160 PANTHER PTHR30437 1 159 3.2E-50 T 14-09-2016 AMK01_RS12800 9e0bd39bd6914da4418284db09418813 160 SUPERFAMILY SSF54534 90 150 1.7E-16 T 14-09-2016 AMK01_RS12800 9e0bd39bd6914da4418284db09418813 160 PIRSF PIRSF006092 14 160 1.3E-22 T 14-09-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMK01_RS12800 9e0bd39bd6914da4418284db09418813 160 Gene3D G3DSA:3.10.50.30 87 159 8.2E-23 T 14-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK01_RS12800 9e0bd39bd6914da4418284db09418813 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 159 1.1E-20 T 14-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK01_RS03685 3f6830b33b49ac8fe116a877d51e731f 453 SUPERFAMILY SSF53850 50 452 1.99E-49 T 14-09-2016 AMK01_RS03685 3f6830b33b49ac8fe116a877d51e731f 453 Pfam PF01547 Bacterial extracellular solute-binding protein 65 366 5.8E-18 T 14-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK01_RS03685 3f6830b33b49ac8fe116a877d51e731f 453 Gene3D G3DSA:3.40.190.10 185 387 5.6E-18 T 14-09-2016 AMK01_RS03685 3f6830b33b49ac8fe116a877d51e731f 453 Gene3D G3DSA:3.40.190.10 62 184 5.2E-12 T 14-09-2016 AMK01_RS03685 3f6830b33b49ac8fe116a877d51e731f 453 PANTHER PTHR30061 54 434 3.5E-78 T 14-09-2016 AMK01_RS03685 3f6830b33b49ac8fe116a877d51e731f 453 PANTHER PTHR30061:SF2 54 434 3.5E-78 T 14-09-2016 AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 SMART SM00052 474 715 4.1E-93 T 14-09-2016 IPR001633 EAL domain AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 SMART SM00267 292 464 2.8E-44 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 459 1.3E-34 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 Gene3D G3DSA:3.20.20.450 478 722 4.6E-88 T 14-09-2016 IPR001633 EAL domain AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 SUPERFAMILY SSF141868 481 723 9.68E-83 T 14-09-2016 IPR001633 EAL domain AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 PANTHER PTHR33121 423 734 4.9E-78 T 14-09-2016 AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 PANTHER PTHR33121 3 13 4.9E-78 T 14-09-2016 AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 PANTHER PTHR33121:SF13 423 734 4.9E-78 T 14-09-2016 AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 Pfam PF05228 CHASE4 domain 64 224 1.0E-18 T 14-09-2016 IPR007892 CHASE4 AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 302 463 9.1E-33 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 PANTHER PTHR33121:SF13 3 13 4.9E-78 T 14-09-2016 AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 Pfam PF00563 EAL domain 481 710 2.2E-71 T 14-09-2016 IPR001633 EAL domain AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 SUPERFAMILY SSF55073 308 466 7.85E-40 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS18795 eba5ffa62344c24d9fa18add8a2fb8df 737 Gene3D G3DSA:3.30.70.270 305 470 4.0E-46 T 14-09-2016 AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 141 20.421 T 14-09-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 Pfam PF02814 UreE urease accessory protein, N-terminal domain 10 67 9.7E-14 T 14-09-2016 IPR004029 UreE urease accessory, N-terminal AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 PIRSF PIRSF036402 1 179 7.0E-41 T 14-09-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 SMART SM00988 3 67 3.3E-14 T 14-09-2016 IPR004029 UreE urease accessory, N-terminal AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 SUPERFAMILY SSF69287 1 73 3.53E-14 T 14-09-2016 IPR004029 UreE urease accessory, N-terminal AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 SUPERFAMILY SSF69737 73 140 8.89E-20 T 14-09-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 Gene3D G3DSA:3.30.70.790 74 144 7.8E-29 T 14-09-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 Gene3D G3DSA:2.60.260.20 15 73 3.6E-5 T 14-09-2016 AMK01_RS16975 e9661be9fbdec7f6cf9b3e9688f96866 180 Pfam PF05194 UreE urease accessory protein, C-terminal domain 74 171 3.9E-18 T 14-09-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AMK01_RS15390 94d634f844b2ef1b6f4e5af7cbc67454 282 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 153 165 - T 14-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMK01_RS15390 94d634f844b2ef1b6f4e5af7cbc67454 282 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 15 278 19.347 T 14-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMK01_RS15390 94d634f844b2ef1b6f4e5af7cbc67454 282 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 11 277 3.0E-71 T 14-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMK01_RS15390 94d634f844b2ef1b6f4e5af7cbc67454 282 PANTHER PTHR30589 9 281 1.4E-91 T 14-09-2016 AMK01_RS15390 94d634f844b2ef1b6f4e5af7cbc67454 282 PANTHER PTHR30589:SF0 9 281 1.4E-91 T 14-09-2016 AMK01_RS15390 94d634f844b2ef1b6f4e5af7cbc67454 282 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 18 272 4.1E-75 T 14-09-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.3E-13 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 73 1.0E-12 T 14-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 Gene3D G3DSA:1.10.1200.10 3 76 6.1E-32 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 PANTHER PTHR20863 3 75 7.6E-28 T 14-09-2016 AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 4.3E-32 T 14-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.03 T 14-09-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-09-2016 IPR006162 Phosphopantetheine attachment site AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0025 T 14-09-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 AMK01_RS07395 881ea50e62247ec9d8ff7b0530d39850 78 SUPERFAMILY SSF47336 2 76 2.36E-22 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS03260 df8390f3f4493702e21423e3ffdff547 340 PANTHER PTHR32196 17 338 4.3E-92 T 14-09-2016 AMK01_RS03260 df8390f3f4493702e21423e3ffdff547 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 324 4.4E-52 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS03260 df8390f3f4493702e21423e3ffdff547 340 PANTHER PTHR32196:SF21 17 338 4.3E-92 T 14-09-2016 AMK01_RS16065 1d0dab21aab63d444974ed1c0a1b85b7 299 Pfam PF00892 EamA-like transporter family 11 136 5.0E-16 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS16065 1d0dab21aab63d444974ed1c0a1b85b7 299 Pfam PF00892 EamA-like transporter family 161 288 5.5E-14 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS16065 1d0dab21aab63d444974ed1c0a1b85b7 299 PANTHER PTHR32322 3 290 2.7E-68 T 14-09-2016 AMK01_RS16065 1d0dab21aab63d444974ed1c0a1b85b7 299 PANTHER PTHR32322:SF11 3 290 2.7E-68 T 14-09-2016 AMK01_RS16065 1d0dab21aab63d444974ed1c0a1b85b7 299 SUPERFAMILY SSF103481 191 289 1.83E-12 T 14-09-2016 AMK01_RS16065 1d0dab21aab63d444974ed1c0a1b85b7 299 SUPERFAMILY SSF103481 43 140 6.15E-13 T 14-09-2016 AMK01_RS17955 5ef3cc68888265aa26e9aedb457788a0 137 Pfam PF01850 PIN domain 4 118 6.9E-7 T 14-09-2016 IPR002716 PIN domain AMK01_RS17955 5ef3cc68888265aa26e9aedb457788a0 137 SUPERFAMILY SSF88723 1 132 1.51E-14 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS17955 5ef3cc68888265aa26e9aedb457788a0 137 Gene3D G3DSA:3.40.50.1010 2 124 2.9E-4 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS08175 f2eeac302e1143e2eda43cc21b8c6034 556 SMART SM00849 19 219 1.0E-24 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS08175 f2eeac302e1143e2eda43cc21b8c6034 556 PANTHER PTHR11203:SF22 1 556 8.2E-158 T 14-09-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 AMK01_RS08175 f2eeac302e1143e2eda43cc21b8c6034 556 Gene3D G3DSA:3.60.15.10 3 259 7.1E-72 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS08175 f2eeac302e1143e2eda43cc21b8c6034 556 PANTHER PTHR11203 1 556 8.2E-158 T 14-09-2016 AMK01_RS08175 f2eeac302e1143e2eda43cc21b8c6034 556 Pfam PF12706 Beta-lactamase superfamily domain 35 169 9.6E-14 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS08175 f2eeac302e1143e2eda43cc21b8c6034 556 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 365 413 5.6E-12 T 14-09-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMK01_RS08175 f2eeac302e1143e2eda43cc21b8c6034 556 SUPERFAMILY SSF56281 9 422 7.6E-80 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 PANTHER PTHR24421:SF4 1 360 2.7E-191 T 14-09-2016 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 PANTHER PTHR24421 1 360 2.7E-191 T 14-09-2016 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 Pfam PF00072 Response regulator receiver domain 7 109 1.5E-20 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 PIRSF PIRSF000876 2 365 1.1E-128 T 14-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 Gene3D G3DSA:3.40.50.2300 3 109 2.5E-26 T 14-09-2016 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 SUPERFAMILY SSF52172 3 109 5.27E-26 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 363 39.232 T 14-09-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 SMART SM00448 5 117 7.9E-19 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 SUPERFAMILY SSF52738 175 359 4.05E-71 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 Pfam PF01339 CheB methylesterase 180 357 1.9E-62 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS18145 aeefefd2567ea10cc3e3555a3e066863 365 Gene3D G3DSA:3.40.50.180 173 359 1.4E-81 T 14-09-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMK01_RS07525 598c0b8fe027aa8379121d68eca36bf0 84 Pfam PF02597 ThiS family 5 84 1.5E-15 T 14-09-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AMK01_RS07525 598c0b8fe027aa8379121d68eca36bf0 84 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 84 4.9E-22 T 14-09-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 AMK01_RS07525 598c0b8fe027aa8379121d68eca36bf0 84 PANTHER PTHR33359 6 84 3.9E-16 T 14-09-2016 AMK01_RS07525 598c0b8fe027aa8379121d68eca36bf0 84 Gene3D G3DSA:3.10.20.30 3 84 4.3E-18 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS07525 598c0b8fe027aa8379121d68eca36bf0 84 SUPERFAMILY SSF54285 2 84 3.55E-17 T 14-09-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMK01_RS10265 984f5b35139bd0f74999ac9a9b0467f7 368 SUPERFAMILY SSF56349 62 354 2.35E-34 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK01_RS10265 984f5b35139bd0f74999ac9a9b0467f7 368 PANTHER PTHR30349:SF20 87 261 3.8E-30 T 14-09-2016 AMK01_RS10265 984f5b35139bd0f74999ac9a9b0467f7 368 PANTHER PTHR30349:SF20 283 368 3.8E-30 T 14-09-2016 AMK01_RS10265 984f5b35139bd0f74999ac9a9b0467f7 368 PANTHER PTHR30349 283 368 3.8E-30 T 14-09-2016 AMK01_RS10265 984f5b35139bd0f74999ac9a9b0467f7 368 Pfam PF00589 Phage integrase family 191 347 1.4E-18 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS10265 984f5b35139bd0f74999ac9a9b0467f7 368 PANTHER PTHR30349 87 261 3.8E-30 T 14-09-2016 AMK01_RS10265 984f5b35139bd0f74999ac9a9b0467f7 368 Gene3D G3DSA:1.10.443.10 180 359 5.1E-28 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS00275 c4ee18a627ee66fe0cdd14c7d1e143d9 227 PANTHER PTHR30582:SF1 69 227 2.0E-45 T 14-09-2016 AMK01_RS00275 c4ee18a627ee66fe0cdd14c7d1e143d9 227 PANTHER PTHR30582 69 227 2.0E-45 T 14-09-2016 AMK01_RS00275 c4ee18a627ee66fe0cdd14c7d1e143d9 227 SUPERFAMILY SSF141523 79 132 7.32E-29 T 14-09-2016 AMK01_RS00275 c4ee18a627ee66fe0cdd14c7d1e143d9 227 SUPERFAMILY SSF141523 160 217 7.32E-29 T 14-09-2016 AMK01_RS00275 c4ee18a627ee66fe0cdd14c7d1e143d9 227 Gene3D G3DSA:2.40.440.10 79 218 1.3E-29 T 14-09-2016 AMK01_RS00275 c4ee18a627ee66fe0cdd14c7d1e143d9 227 Pfam PF03734 L,D-transpeptidase catalytic domain 86 225 4.0E-16 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS13930 b235bf8570a1e65e0a5f151ccaabffd2 473 PANTHER PTHR33567 1 411 1.9E-149 T 14-09-2016 AMK01_RS13930 b235bf8570a1e65e0a5f151ccaabffd2 473 PANTHER PTHR33567:SF1 1 411 1.9E-149 T 14-09-2016 AMK01_RS13930 b235bf8570a1e65e0a5f151ccaabffd2 473 PANTHER PTHR33567:SF1 429 473 1.9E-149 T 14-09-2016 AMK01_RS13930 b235bf8570a1e65e0a5f151ccaabffd2 473 PANTHER PTHR33567 429 473 1.9E-149 T 14-09-2016 AMK01_RS13930 b235bf8570a1e65e0a5f151ccaabffd2 473 Pfam PF02417 Chromate transporter 31 193 4.7E-31 T 14-09-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMK01_RS13930 b235bf8570a1e65e0a5f151ccaabffd2 473 Pfam PF02417 Chromate transporter 270 466 3.7E-31 T 14-09-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMK01_RS13930 b235bf8570a1e65e0a5f151ccaabffd2 473 TIGRFAM TIGR00937 2A51: chromate efflux transporter 36 412 2.6E-59 T 14-09-2016 IPR014047 Chromate transporter, long chain AMK01_RS13930 b235bf8570a1e65e0a5f151ccaabffd2 473 PIRSF PIRSF004810 11 472 1.2E-129 T 14-09-2016 IPR014047 Chromate transporter, long chain AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 PANTHER PTHR11533 618 880 0.0 T 14-09-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 PANTHER PTHR11533 2 594 0.0 T 14-09-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 Gene3D G3DSA:1.10.390.10 315 457 8.2E-30 T 14-09-2016 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 Pfam PF11940 Domain of unknown function (DUF3458) 466 837 2.7E-117 T 14-09-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 880 0.0 T 14-09-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 SUPERFAMILY SSF63737 6 200 9.29E-43 T 14-09-2016 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 7.4E-8 T 14-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 7.4E-8 T 14-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 7.4E-8 T 14-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 7.4E-8 T 14-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 Gene3D G3DSA:1.25.50.10 556 881 2.5E-102 T 14-09-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 Pfam PF01433 Peptidase family M1 16 391 1.6E-67 T 14-09-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 PANTHER PTHR11533:SF152 618 880 0.0 T 14-09-2016 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 PANTHER PTHR11533:SF152 2 594 0.0 T 14-09-2016 AMK01_RS06630 7c9f13a0e2645d48a2245a654f090261 882 SUPERFAMILY SSF55486 210 457 1.17E-74 T 14-09-2016 AMK01_RS04940 ea6cbea46e3e83a82a6747b368a15c2b 249 SMART SM00382 29 209 1.1E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS04940 ea6cbea46e3e83a82a6747b368a15c2b 249 PANTHER PTHR24220:SF581 6 227 1.3E-62 T 14-09-2016 AMK01_RS04940 ea6cbea46e3e83a82a6747b368a15c2b 249 PANTHER PTHR24220 6 227 1.3E-62 T 14-09-2016 AMK01_RS04940 ea6cbea46e3e83a82a6747b368a15c2b 249 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS04940 ea6cbea46e3e83a82a6747b368a15c2b 249 Pfam PF00005 ABC transporter 21 160 2.9E-24 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS04940 ea6cbea46e3e83a82a6747b368a15c2b 249 SUPERFAMILY SSF52540 3 219 2.34E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04940 ea6cbea46e3e83a82a6747b368a15c2b 249 Gene3D G3DSA:3.40.50.300 2 224 8.4E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03100 b44ecd921e1fd69ac62729596c3b810a 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 2.3E-27 T 14-09-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMK01_RS03100 b44ecd921e1fd69ac62729596c3b810a 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.0E-32 T 14-09-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMK01_RS03100 b44ecd921e1fd69ac62729596c3b810a 72 Gene3D G3DSA:2.40.50.140 1 72 4.1E-38 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS03100 b44ecd921e1fd69ac62729596c3b810a 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.022 T 14-09-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMK01_RS03100 b44ecd921e1fd69ac62729596c3b810a 72 SUPERFAMILY SSF50249 1 71 7.71E-27 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS03100 b44ecd921e1fd69ac62729596c3b810a 72 PANTHER PTHR33370 1 72 3.9E-38 T 14-09-2016 AMK01_RS02430 cb33e2c5f1afe5a6034b91e57538f1b9 222 Gene3D G3DSA:3.40.50.150 47 155 2.2E-12 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02430 cb33e2c5f1afe5a6034b91e57538f1b9 222 SUPERFAMILY SSF53335 13 164 6.14E-20 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02430 cb33e2c5f1afe5a6034b91e57538f1b9 222 PANTHER PTHR11727 35 142 7.1E-32 T 14-09-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMK01_RS02430 cb33e2c5f1afe5a6034b91e57538f1b9 222 PANTHER PTHR11727:SF14 35 142 7.1E-32 T 14-09-2016 AMK01_RS02430 cb33e2c5f1afe5a6034b91e57538f1b9 222 Pfam PF13649 Methyltransferase domain 49 146 1.5E-9 T 14-09-2016 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 92 133 7.0E-15 T 14-09-2016 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 PANTHER PTHR10993 19 233 2.6E-72 T 14-09-2016 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 87 102 - T 14-09-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 Gene3D G3DSA:3.90.1550.10 21 233 7.0E-68 T 14-09-2016 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 SUPERFAMILY SSF55681 24 234 6.05E-64 T 14-09-2016 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 Pfam PF03099 Biotin/lipoate A/B protein ligase family 82 188 6.8E-7 T 14-09-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 PIRSF PIRSF016262 18 238 5.1E-54 T 14-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 53 231 6.4E-46 T 14-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 PANTHER PTHR10993:SF10 19 233 2.6E-72 T 14-09-2016 AMK01_RS11395 c30bd2725120b15bb5738e6637d16e69 239 Hamap MF_00013 Octanoyltransferase [lipB]. 21 235 35.429 T 14-09-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS11980 039854710947151d447297af7053934a 127 SUPERFAMILY SSF47226 28 124 6.02E-17 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS11980 039854710947151d447297af7053934a 127 Gene3D G3DSA:1.20.120.160 23 126 3.0E-22 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS11980 039854710947151d447297af7053934a 127 Pfam PF01627 Hpt domain 47 102 4.5E-8 T 14-09-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 PRINTS PR00142 RecA protein signature 177 206 1.5E-85 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 PRINTS PR00142 RecA protein signature 139 168 1.5E-85 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 PRINTS PR00142 RecA protein signature 255 284 1.5E-85 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 PRINTS PR00142 RecA protein signature 309 326 1.5E-85 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 PRINTS PR00142 RecA protein signature 222 250 1.5E-85 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 PRINTS PR00142 RecA protein signature 105 134 1.5E-85 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 335 2.3E-174 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 SMART SM00382 69 240 7.6E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 PANTHER PTHR22942 1 347 4.5E-204 T 14-09-2016 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 ProSitePatterns PS00321 recA signature. 225 233 - T 14-09-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 Hamap MF_00268 Protein RecA [recA]. 16 341 51.863 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 Gene3D G3DSA:3.30.250.10 280 337 1.4E-27 T 14-09-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 Gene3D G3DSA:3.40.50.300 46 279 5.2E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 SUPERFAMILY SSF52540 18 279 9.39E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 PANTHER PTHR22942:SF1 1 347 4.5E-204 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 Pfam PF00154 recA bacterial DNA recombination protein 18 280 1.8E-148 T 14-09-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK01_RS11900 e7c1223cdf64c55a344d85ffed8b82d6 362 SUPERFAMILY SSF54752 280 337 1.44E-21 T 14-09-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 SUPERFAMILY SSF46785 7 138 2.97E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 PANTHER PTHR33164 1 148 1.1E-24 T 14-09-2016 AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 9.9E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 9.9E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 9.9E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 9.9E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 Pfam PF01047 MarR family 31 88 5.2E-16 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 PANTHER PTHR33164:SF16 1 148 1.1E-24 T 14-09-2016 AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 Gene3D G3DSA:1.10.10.10 6 139 1.9E-35 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17265 cf478ee95db586fbf35ccc446ee3a909 154 SMART SM00347 24 124 3.8E-26 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS12940 eae9a97f255244930a2be9b3639d1f02 183 SUPERFAMILY SSF48452 4 179 6.45E-61 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12940 eae9a97f255244930a2be9b3639d1f02 183 PANTHER PTHR23004:SF7 8 183 8.9E-61 T 14-09-2016 AMK01_RS12940 eae9a97f255244930a2be9b3639d1f02 183 Gene3D G3DSA:1.25.40.10 83 183 3.7E-35 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12940 eae9a97f255244930a2be9b3639d1f02 183 PANTHER PTHR23004 8 183 8.9E-61 T 14-09-2016 AMK01_RS12940 eae9a97f255244930a2be9b3639d1f02 183 Pfam PF06041 Bacterial protein of unknown function (DUF924) 10 180 1.3E-54 T 14-09-2016 IPR010323 Protein of unknown function DUF924 AMK01_RS12940 eae9a97f255244930a2be9b3639d1f02 183 Gene3D G3DSA:1.20.58.320 3 80 1.8E-25 T 14-09-2016 AMK01_RS06980 f4e449fd50364bfec8f66c1b381ac08d 238 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 93 122 0.016 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS06980 f4e449fd50364bfec8f66c1b381ac08d 238 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 178 206 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS06980 f4e449fd50364bfec8f66c1b381ac08d 238 SUPERFAMILY SSF51161 90 229 4.01E-32 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS06980 f4e449fd50364bfec8f66c1b381ac08d 238 Gene3D G3DSA:2.160.10.10 71 227 3.5E-36 T 14-09-2016 AMK01_RS06980 f4e449fd50364bfec8f66c1b381ac08d 238 PANTHER PTHR23416 91 235 1.4E-26 T 14-09-2016 AMK01_RS06980 f4e449fd50364bfec8f66c1b381ac08d 238 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 178 202 2.9E-5 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS16165 53e5ddf9a3a4a9f79b7f839a25ca6dcc 260 PANTHER PTHR24220 10 243 1.0E-86 T 14-09-2016 AMK01_RS16165 53e5ddf9a3a4a9f79b7f839a25ca6dcc 260 PANTHER PTHR24220:SF416 10 243 1.0E-86 T 14-09-2016 AMK01_RS16165 53e5ddf9a3a4a9f79b7f839a25ca6dcc 260 SMART SM00382 33 223 6.5E-17 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16165 53e5ddf9a3a4a9f79b7f839a25ca6dcc 260 Gene3D G3DSA:3.40.50.300 6 237 1.4E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16165 53e5ddf9a3a4a9f79b7f839a25ca6dcc 260 Pfam PF00005 ABC transporter 25 175 4.4E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16165 53e5ddf9a3a4a9f79b7f839a25ca6dcc 260 SUPERFAMILY SSF52540 7 236 1.97E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05035 81dd3a448022b72f51cfd104b5b868d6 116 Gene3D G3DSA:3.30.70.900 1 102 3.9E-21 T 14-09-2016 AMK01_RS05035 81dd3a448022b72f51cfd104b5b868d6 116 SUPERFAMILY SSF54909 1 99 8.5E-25 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS05035 81dd3a448022b72f51cfd104b5b868d6 116 PANTHER PTHR37811:SF2 1 116 1.1E-44 T 14-09-2016 AMK01_RS05035 81dd3a448022b72f51cfd104b5b868d6 116 PANTHER PTHR37811 1 116 1.1E-44 T 14-09-2016 AMK01_RS05035 81dd3a448022b72f51cfd104b5b868d6 116 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.6E-11 T 14-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain AMK01_RS16970 72726bfa64274c8c3de8417e26fd91c9 223 Hamap MF_01385 Urease accessory protein UreF [ureF]. 9 223 27.646 T 14-09-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMK01_RS16970 72726bfa64274c8c3de8417e26fd91c9 223 PIRSF PIRSF009467 6 223 7.5E-57 T 14-09-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMK01_RS16970 72726bfa64274c8c3de8417e26fd91c9 223 Pfam PF01730 UreF 42 180 1.3E-23 T 14-09-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AMK01_RS16970 72726bfa64274c8c3de8417e26fd91c9 223 PANTHER PTHR33620 4 223 4.7E-26 T 14-09-2016 AMK01_RS05865 228b0d60940ef3f6854be355d34e4599 211 PANTHER PTHR30363 1 208 3.8E-63 T 14-09-2016 AMK01_RS05865 228b0d60940ef3f6854be355d34e4599 211 Gene3D G3DSA:1.10.10.10 8 104 6.4E-10 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05865 228b0d60940ef3f6854be355d34e4599 211 PANTHER PTHR30363:SF9 1 208 3.8E-63 T 14-09-2016 AMK01_RS05865 228b0d60940ef3f6854be355d34e4599 211 SUPERFAMILY SSF46785 8 187 1.29E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05865 228b0d60940ef3f6854be355d34e4599 211 ProSitePatterns PS00261 Glycoprotein hormones beta chain signature 1. 168 174 - T 14-09-2016 IPR018245 Gonadotropin, beta subunit, conserved site GO:0005179|GO:0005576 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 Pfam PF02911 Formyl transferase, C-terminal domain 206 302 3.9E-22 T 14-09-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 14-09-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 305 32.597 T 14-09-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 SUPERFAMILY SSF53328 3 209 3.66E-59 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 PANTHER PTHR11138 3 311 3.0E-97 T 14-09-2016 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 Pfam PF00551 Formyl transferase 9 182 2.3E-36 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 Gene3D G3DSA:3.40.50.170 2 207 2.7E-66 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 302 6.8E-70 T 14-09-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 SUPERFAMILY SSF50486 207 310 6.28E-26 T 14-09-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AMK01_RS02275 0f4a127e3dbbe1dff38f44cbc58920f6 311 Gene3D G3DSA:3.10.25.10 209 310 1.0E-27 T 14-09-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS18020 d93bcc232e4d2059b4dcb095611f6dcc 188 SMART SM00530 7 61 2.2E-9 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS18020 d93bcc232e4d2059b4dcb095611f6dcc 188 SUPERFAMILY SSF47413 3 56 2.57E-11 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS18020 d93bcc232e4d2059b4dcb095611f6dcc 188 Pfam PF01381 Helix-turn-helix 8 55 1.5E-10 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS18020 d93bcc232e4d2059b4dcb095611f6dcc 188 Gene3D G3DSA:1.10.260.40 8 55 8.5E-11 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS07085 31300ceaf8d1c730aa6642b16ca4c816 134 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 129 2.2E-23 T 14-09-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK01_RS07085 31300ceaf8d1c730aa6642b16ca4c816 134 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 23.966 T 14-09-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK01_RS07085 31300ceaf8d1c730aa6642b16ca4c816 134 Gene3D G3DSA:3.90.470.20 1 128 3.6E-36 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK01_RS07085 31300ceaf8d1c730aa6642b16ca4c816 134 SUPERFAMILY SSF56214 1 128 5.36E-27 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK01_RS07085 31300ceaf8d1c730aa6642b16ca4c816 134 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 88 4.0E-41 T 14-09-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK01_RS07085 31300ceaf8d1c730aa6642b16ca4c816 134 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 102 9.0E-17 T 14-09-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK01_RS07085 31300ceaf8d1c730aa6642b16ca4c816 134 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 130 3.1E-27 T 14-09-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 SUPERFAMILY SSF53244 353 504 1.09E-45 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 PANTHER PTHR23135 34 505 9.5E-159 T 14-09-2016 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 Gene3D G3DSA:3.40.1190.10 122 354 1.4E-68 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 Pfam PF01225 Mur ligase family, catalytic domain 47 118 1.4E-7 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 PANTHER PTHR23135:SF4 34 505 9.5E-159 T 14-09-2016 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 Pfam PF02875 Mur ligase family, glutamate ligase domain 352 437 1.7E-22 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 SUPERFAMILY SSF63418 46 120 3.01E-18 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 Gene3D G3DSA:3.90.190.20 355 494 3.3E-52 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 Pfam PF08245 Mur ligase middle domain 128 330 3.5E-49 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 21 501 30.946 T 14-09-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 Gene3D G3DSA:3.40.1390.10 44 120 2.9E-19 T 14-09-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 SUPERFAMILY SSF53623 121 349 1.12E-68 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS14640 ae555374608d54e33f452f1a7d990f98 506 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 46 501 1.2E-137 T 14-09-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 Gene3D G3DSA:1.10.1670.10 151 236 7.3E-37 T 14-09-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 Hamap MF_00942 Endonuclease III [nth]. 16 237 37.96 T 14-09-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 TIGRFAM TIGR01083 nth: endonuclease III 33 222 1.9E-83 T 14-09-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 ProSitePatterns PS01155 Endonuclease III family signature. 130 159 - T 14-09-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 SUPERFAMILY SSF48150 32 236 3.45E-72 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 62 196 2.8E-23 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 PANTHER PTHR10359:SF18 35 239 2.1E-89 T 14-09-2016 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 Gene3D G3DSA:1.10.340.30 51 150 4.0E-38 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 Pfam PF00633 Helix-hairpin-helix motif 128 155 5.3E-9 T 14-09-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 215 231 4.9E-6 T 14-09-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 SMART SM00478 66 213 2.0E-61 T 14-09-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK01_RS18980 c7240f57a13eb594fd340ac4d820116b 257 PANTHER PTHR10359 35 239 2.1E-89 T 14-09-2016 AMK01_RS19890 732f5bfd3bad8854a93702ba79003fdb 134 SUPERFAMILY SSF51344 4 85 1.2E-21 T 14-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19890 732f5bfd3bad8854a93702ba79003fdb 134 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 120 5.8E-28 T 14-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19890 732f5bfd3bad8854a93702ba79003fdb 134 PANTHER PTHR13822 1 110 1.8E-27 T 14-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19890 732f5bfd3bad8854a93702ba79003fdb 134 Gene3D G3DSA:2.60.15.10 1 90 2.3E-28 T 14-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19890 732f5bfd3bad8854a93702ba79003fdb 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 4.0E-33 T 14-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19890 732f5bfd3bad8854a93702ba79003fdb 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 4.8E-24 T 14-09-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19890 732f5bfd3bad8854a93702ba79003fdb 134 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 134 17.921 T 14-09-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS12080 7c05db9e33a18a2a4d3adbb700c36206 365 Pfam PF11064 Protein of unknown function (DUF2865) 191 302 1.5E-31 T 14-09-2016 IPR021293 Protein of unknown function DUF2865 AMK01_RS08015 f8202ae1f46da3dc86e10566da2db8ed 417 SUPERFAMILY SSF55073 221 378 1.88E-42 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS08015 f8202ae1f46da3dc86e10566da2db8ed 417 PANTHER PTHR10799 100 371 1.2E-25 T 14-09-2016 AMK01_RS08015 f8202ae1f46da3dc86e10566da2db8ed 417 SMART SM00267 205 376 2.7E-48 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08015 f8202ae1f46da3dc86e10566da2db8ed 417 Pfam PF00990 Diguanylate cyclase, GGDEF domain 217 371 1.9E-37 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08015 f8202ae1f46da3dc86e10566da2db8ed 417 Gene3D G3DSA:3.30.70.270 218 379 2.4E-49 T 14-09-2016 AMK01_RS08015 f8202ae1f46da3dc86e10566da2db8ed 417 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 213 374 4.7E-41 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08015 f8202ae1f46da3dc86e10566da2db8ed 417 PANTHER PTHR10799:SF774 100 371 1.2E-25 T 14-09-2016 AMK01_RS16745 eccc8ae8a04fad050a0bf6b9e5edda51 318 SUPERFAMILY SSF56219 95 306 1.1E-24 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS16745 eccc8ae8a04fad050a0bf6b9e5edda51 318 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 98 297 8.8E-15 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS16745 eccc8ae8a04fad050a0bf6b9e5edda51 318 Gene3D G3DSA:3.60.10.10 95 238 7.0E-11 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 SUPERFAMILY SSF56784 439 459 3.61E-51 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 SUPERFAMILY SSF56784 497 738 3.61E-51 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 Pfam PF00403 Heavy-metal-associated domain 9 67 5.0E-12 T 14-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 Gene3D G3DSA:3.40.1110.10 455 566 1.3E-12 T 14-09-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 190 495 5.0E-95 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 SUPERFAMILY SSF81653 243 340 7.85E-24 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 Gene3D G3DSA:3.40.50.1000 567 706 1.1E-42 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 Gene3D G3DSA:3.40.50.1000 416 454 1.1E-42 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PANTHER PTHR24093 2 743 9.8E-200 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 Gene3D G3DSA:2.70.150.10 204 341 9.2E-25 T 14-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 208 740 1.0E-121 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 SUPERFAMILY SSF81665 687 725 4.71E-16 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 SUPERFAMILY SSF81665 192 244 4.71E-16 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 SUPERFAMILY SSF81665 341 435 4.71E-16 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 443 449 - T 14-09-2016 IPR018303 P-type ATPase, phosphorylation site AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 Pfam PF00122 E1-E2 ATPase 212 432 6.0E-62 T 14-09-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 190 740 2.1E-172 T 14-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 Gene3D G3DSA:3.30.70.100 5 70 2.1E-17 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00941 Cadmium-transporting ATPase signature 306 322 5.3E-8 T 14-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00941 Cadmium-transporting ATPase signature 325 339 5.3E-8 T 14-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00941 Cadmium-transporting ATPase signature 9 18 5.3E-8 T 14-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00941 Cadmium-transporting ATPase signature 225 245 5.3E-8 T 14-09-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 Pfam PF00702 haloacid dehalogenase-like hydrolase 438 652 1.2E-34 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 575 5.8E-30 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 441 455 5.8E-30 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 596 5.8E-30 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 657 5.8E-30 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 290 304 5.8E-30 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 661 673 5.8E-30 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 SUPERFAMILY SSF55008 3 73 4.58E-16 T 14-09-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 PANTHER PTHR24093:SF317 2 743 9.8E-200 T 14-09-2016 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 540 716 4.0E-37 T 14-09-2016 IPR001757 P-type ATPase GO:0016021 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 213 475 2.5E-39 T 14-09-2016 IPR001757 P-type ATPase GO:0016021 AMK01_RS19210 78e027cb479d5c0b716fe2bfa0162f58 745 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 14-09-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMK01_RS19395 baa129c4df48e6f1b3cd6cda410b2951 425 Gene3D G3DSA:3.40.630.30 291 362 6.2E-4 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19395 baa129c4df48e6f1b3cd6cda410b2951 425 Pfam PF13480 Acetyltransferase (GNAT) domain 221 349 1.6E-22 T 14-09-2016 AMK01_RS19395 baa129c4df48e6f1b3cd6cda410b2951 425 SUPERFAMILY SSF55729 225 350 7.07E-13 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 26 264 1.5E-60 T 14-09-2016 AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 Gene3D G3DSA:3.40.50.720 13 266 1.2E-77 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 SUPERFAMILY SSF51735 15 266 5.41E-74 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 PANTHER PTHR24321:SF6 15 266 1.4E-49 T 14-09-2016 AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 PANTHER PTHR24321 15 266 1.4E-49 T 14-09-2016 AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 3.1E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 3.1E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 3.1E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 3.1E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 3.1E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10530 ae854ceec08fce89bcb6dbad48a119ae 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 3.1E-36 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS07185 a2ce98c5ab48e7575589dd6915a14be1 138 Gene3D G3DSA:3.90.79.10 5 135 8.2E-30 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS07185 a2ce98c5ab48e7575589dd6915a14be1 138 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.2E-8 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS07185 a2ce98c5ab48e7575589dd6915a14be1 138 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.2E-8 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS07185 a2ce98c5ab48e7575589dd6915a14be1 138 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK01_RS07185 a2ce98c5ab48e7575589dd6915a14be1 138 Pfam PF00293 NUDIX domain 6 120 1.3E-21 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS07185 a2ce98c5ab48e7575589dd6915a14be1 138 SUPERFAMILY SSF55811 8 135 5.82E-30 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS07185 a2ce98c5ab48e7575589dd6915a14be1 138 PANTHER PTHR22769 11 134 2.1E-24 T 14-09-2016 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 Gene3D G3DSA:3.40.190.10 173 267 6.4E-31 T 14-09-2016 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 PANTHER PTHR30346 1 290 1.7E-82 T 14-09-2016 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 SUPERFAMILY SSF53850 91 296 7.0E-35 T 14-09-2016 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-21 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 SUPERFAMILY SSF46785 2 113 1.4E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 PANTHER PTHR30346:SF13 1 290 1.7E-82 T 14-09-2016 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 Gene3D G3DSA:3.40.190.10 89 172 1.1E-13 T 14-09-2016 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 Gene3D G3DSA:1.10.10.10 3 82 5.4E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18895 e3157e0742a7651cca29278d55907adb 302 Pfam PF03466 LysR substrate binding domain 90 293 7.7E-39 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS06350 4aa76943ce1daa5c7a407e49797f0f27 171 SUPERFAMILY SSF55729 2 167 7.89E-37 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS06350 4aa76943ce1daa5c7a407e49797f0f27 171 Pfam PF13420 Acetyltransferase (GNAT) domain 7 158 1.3E-28 T 14-09-2016 AMK01_RS06350 4aa76943ce1daa5c7a407e49797f0f27 171 PANTHER PTHR23091 4 171 1.6E-79 T 14-09-2016 AMK01_RS06350 4aa76943ce1daa5c7a407e49797f0f27 171 Gene3D G3DSA:3.40.630.30 5 166 2.5E-44 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS06350 4aa76943ce1daa5c7a407e49797f0f27 171 PANTHER PTHR23091:SF187 4 171 1.6E-79 T 14-09-2016 AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PANTHER PTHR24322 145 176 8.5E-50 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PANTHER PTHR24322 11 129 8.5E-50 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 Pfam PF00106 short chain dehydrogenase 8 188 1.1E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.4E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.4E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.4E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.4E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.4E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 Gene3D G3DSA:3.40.50.720 7 266 6.0E-69 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 SUPERFAMILY SSF51735 2 265 2.8E-65 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04625 c757bcc3b874e092f8ea8e7edf98301f 272 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 169 0.0028 T 14-09-2016 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 PANTHER PTHR13789:SF90 2 426 4.0E-109 T 14-09-2016 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 Gene3D G3DSA:3.50.50.60 5 170 6.8E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 Gene3D G3DSA:3.50.50.60 263 343 6.8E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 326 4.1E-46 T 14-09-2016 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 4.1E-46 T 14-09-2016 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 144 159 4.1E-46 T 14-09-2016 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 4.1E-46 T 14-09-2016 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.1E-46 T 14-09-2016 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 326 342 4.1E-46 T 14-09-2016 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 SUPERFAMILY SSF51905 262 355 2.54E-61 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 SUPERFAMILY SSF51905 5 165 2.54E-61 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 Pfam PF01494 FAD binding domain 5 340 3.2E-78 T 14-09-2016 IPR002938 FAD-binding domain GO:0071949 AMK01_RS10355 079f90f29cd796810702fcc353497f40 497 PANTHER PTHR13789 2 426 4.0E-109 T 14-09-2016 AMK01_RS17855 32c8b5a3d6bcf6a344048224f48507e5 486 SUPERFAMILY SSF52402 18 207 1.19E-48 T 14-09-2016 AMK01_RS17855 32c8b5a3d6bcf6a344048224f48507e5 486 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 207 8.0E-47 T 14-09-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK01_RS17855 32c8b5a3d6bcf6a344048224f48507e5 486 Gene3D G3DSA:3.40.50.620 22 185 5.5E-20 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS17855 32c8b5a3d6bcf6a344048224f48507e5 486 PANTHER PTHR11807:SF2 19 241 8.2E-51 T 14-09-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK01_RS17855 32c8b5a3d6bcf6a344048224f48507e5 486 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 306 20.029 T 14-09-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK01_RS17855 32c8b5a3d6bcf6a344048224f48507e5 486 Pfam PF01171 PP-loop family 25 205 4.4E-47 T 14-09-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMK01_RS17855 32c8b5a3d6bcf6a344048224f48507e5 486 PANTHER PTHR11807 19 241 8.2E-51 T 14-09-2016 AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 SUPERFAMILY SSF49503 312 462 1.57E-28 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 SUPERFAMILY SSF49503 163 275 4.8E-14 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 Pfam PF07732 Multicopper oxidase 50 159 5.5E-29 T 14-09-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 Pfam PF00394 Multicopper oxidase 215 274 1.8E-4 T 14-09-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 Pfam PF07731 Multicopper oxidase 366 459 3.7E-23 T 14-09-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 Gene3D G3DSA:2.60.40.420 50 159 4.3E-26 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 Gene3D G3DSA:2.60.40.420 160 276 1.3E-19 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 PANTHER PTHR11709:SF33 46 462 3.8E-64 T 14-09-2016 AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 PANTHER PTHR11709 46 462 3.8E-64 T 14-09-2016 AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 SUPERFAMILY SSF49503 58 183 7.58E-29 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 Gene3D G3DSA:2.60.40.420 316 462 2.5E-38 T 14-09-2016 IPR008972 Cupredoxin AMK01_RS07620 510866f7e9475d1cfe6e6552ba900229 463 ProSitePatterns PS00080 Multicopper oxidases signature 2. 445 456 - T 14-09-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 332 35.477 T 14-09-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 318 5.3E-53 T 14-09-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 PANTHER PTHR10174 66 334 2.2E-74 T 14-09-2016 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 333 4.4E-141 T 14-09-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 PANTHER PTHR10174:SF2 66 334 2.2E-74 T 14-09-2016 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 Gene3D G3DSA:3.40.50.720 2 142 1.3E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 SUPERFAMILY SSF51735 3 157 6.68E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 118 5.6E-30 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 Gene3D G3DSA:3.30.360.10 143 314 9.1E-80 T 14-09-2016 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 SMART SM00859 4 119 4.4E-36 T 14-09-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 SUPERFAMILY SSF55347 129 319 7.6E-74 T 14-09-2016 AMK01_RS21065 16be08253235fc16efde126baca89f7c 344 PIRSF PIRSF000148 2 337 4.6E-128 T 14-09-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 PANTHER PTHR11550 1 538 0.0 T 14-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 SUPERFAMILY SSF52317 289 537 3.97E-79 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 Gene3D G3DSA:3.40.50.300 1 284 9.5E-126 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 Pfam PF06418 CTP synthase N-terminus 3 263 6.0E-119 T 14-09-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 SUPERFAMILY SSF52540 1 266 3.44E-117 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 Gene3D G3DSA:3.40.50.880 288 539 9.3E-96 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 Pfam PF00117 Glutamine amidotransferase class-I 301 534 2.0E-53 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 Hamap MF_01227 CTP synthase [pyrG]. 2 539 49.561 T 14-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK01_RS11195 673e2ab397c94ca3123fb760ba92d0d6 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 1.6E-227 T 14-09-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 PANTHER PTHR10909:SF294 104 305 1.3E-117 T 14-09-2016 AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 Gene3D G3DSA:3.40.50.1220 184 309 1.3E-58 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 PIRSF PIRSF000089 1 309 5.7E-101 T 14-09-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 PANTHER PTHR10909 104 305 1.3E-117 T 14-09-2016 AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 SUPERFAMILY SSF52402 3 180 2.6E-51 T 14-09-2016 AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 Pfam PF01012 Electron transfer flavoprotein domain 4 168 5.2E-34 T 14-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 2.2E-34 T 14-09-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 SMART SM00893 3 181 1.6E-49 T 14-09-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 14-09-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 SUPERFAMILY SSF52467 188 308 4.36E-45 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS19500 e739167197ca26986e5f643ab87e38d1 309 Gene3D G3DSA:3.40.50.620 1 179 1.7E-55 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 PANTHER PTHR11986:SF80 14 438 7.9E-246 T 14-09-2016 AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 Gene3D G3DSA:3.40.640.10 64 341 1.7E-86 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 Gene3D G3DSA:3.90.1150.10 343 439 4.3E-43 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 Gene3D G3DSA:3.90.1150.10 10 63 4.3E-43 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 PIRSF PIRSF000521 34 440 3.0E-30 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 SUPERFAMILY SSF53383 14 438 3.43E-124 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 PANTHER PTHR11986 14 438 7.9E-246 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS15735 c79d08417cf9bb8a6db6317510b50b67 441 Pfam PF00202 Aminotransferase class-III 27 437 6.1E-116 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS03890 3527ef637f47027a4c03ca93fe50b4ac 167 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 71 161 1.8E-24 T 14-09-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 AMK01_RS03890 3527ef637f47027a4c03ca93fe50b4ac 167 PANTHER PTHR12714:SF8 8 160 1.7E-39 T 14-09-2016 AMK01_RS03890 3527ef637f47027a4c03ca93fe50b4ac 167 PANTHER PTHR12714 8 160 1.7E-39 T 14-09-2016 AMK01_RS06345 f4b4e48051a0ae209461fa444d0b16c6 222 PANTHER PTHR20855 5 211 4.4E-44 T 14-09-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AMK01_RS06345 f4b4e48051a0ae209461fa444d0b16c6 222 PANTHER PTHR20855:SF3 5 211 4.4E-44 T 14-09-2016 IPR005744 Hly-III GO:0016021|GO:0019835 AMK01_RS06345 f4b4e48051a0ae209461fa444d0b16c6 222 Pfam PF03006 Haemolysin-III related 20 208 2.8E-24 T 14-09-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 6.6E-6 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 6.6E-6 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 SMART SM00342 188 270 1.1E-21 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 Gene3D G3DSA:1.10.10.60 172 225 2.6E-9 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 PANTHER PTHR11019:SF75 45 278 5.4E-18 T 14-09-2016 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 266 - T 14-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 Pfam PF12833 Helix-turn-helix domain 194 271 2.0E-17 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 SUPERFAMILY SSF46689 172 222 1.25E-5 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 SUPERFAMILY SSF46689 224 273 2.46E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 178 217 - T 14-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 Gene3D G3DSA:1.10.10.60 226 273 2.5E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06835 f865657c4f2d9598e18e95bf6ab59eb8 279 PANTHER PTHR11019 45 278 5.4E-18 T 14-09-2016 AMK01_RS01215 b40ab53117ac85fc4fba8604d97ab653 279 SUPERFAMILY SSF48452 57 239 3.67E-22 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS01215 b40ab53117ac85fc4fba8604d97ab653 279 PIRSF PIRSF035836 3 272 2.7E-118 T 14-09-2016 IPR014596 Uncharacterised conserved protein UCP035836 AMK01_RS01215 b40ab53117ac85fc4fba8604d97ab653 279 Pfam PF07721 Tetratricopeptide repeat 216 236 0.31 T 14-09-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 UniPathway: UPA00694 AMK01_RS01215 b40ab53117ac85fc4fba8604d97ab653 279 PANTHER PTHR23083 80 254 1.5E-22 T 14-09-2016 AMK01_RS01215 b40ab53117ac85fc4fba8604d97ab653 279 Pfam PF14559 Tetratricopeptide repeat 86 142 1.5E-5 T 14-09-2016 AMK01_RS01215 b40ab53117ac85fc4fba8604d97ab653 279 Gene3D G3DSA:1.25.40.10 54 259 2.4E-28 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS07655 22a1d97ef91b6481a7cd4f7596e6d056 258 SUPERFAMILY SSF55729 102 244 3.04E-21 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS07655 22a1d97ef91b6481a7cd4f7596e6d056 258 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 87 1.2E-15 T 14-09-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 AMK01_RS07655 22a1d97ef91b6481a7cd4f7596e6d056 258 PIRSF PIRSF037208 1 257 2.5E-79 T 14-09-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic AMK01_RS07655 22a1d97ef91b6481a7cd4f7596e6d056 258 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 239 3.0E-33 T 14-09-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 AMK01_RS07655 22a1d97ef91b6481a7cd4f7596e6d056 258 PANTHER PTHR21367 19 248 8.7E-68 T 14-09-2016 IPR030700 Arginine-tRNA-protein transferase AMK01_RS07655 22a1d97ef91b6481a7cd4f7596e6d056 258 PANTHER PTHR21367:SF0 19 248 8.7E-68 T 14-09-2016 AMK01_RS07655 22a1d97ef91b6481a7cd4f7596e6d056 258 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 2 248 42.359 T 14-09-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic AMK01_RS02180 76c7231d786d3a8b75d3ed394935b522 151 SUPERFAMILY SSF55961 1 144 4.66E-39 T 14-09-2016 AMK01_RS02180 76c7231d786d3a8b75d3ed394935b522 151 PANTHER PTHR38588:SF1 2 146 1.9E-36 T 14-09-2016 AMK01_RS02180 76c7231d786d3a8b75d3ed394935b522 151 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 5 144 8.4E-40 T 14-09-2016 IPR010419 Carbon monoxide dehydrogenase subunit G AMK01_RS02180 76c7231d786d3a8b75d3ed394935b522 151 PANTHER PTHR38588 2 146 1.9E-36 T 14-09-2016 AMK01_RS02180 76c7231d786d3a8b75d3ed394935b522 151 Gene3D G3DSA:3.30.530.20 1 148 1.1E-52 T 14-09-2016 IPR023393 START-like domain AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 224 247 3.5E-63 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 172 193 3.5E-63 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 328 347 3.5E-63 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 119 145 3.5E-63 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 356 373 3.5E-63 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 388 407 3.5E-63 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 147 166 3.5E-63 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PANTHER PTHR11706 10 446 2.1E-196 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 Pfam PF01566 Natural resistance-associated macrophage protein 60 416 2.1E-132 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 39 412 2.4E-119 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 26 444 39.156 T 14-09-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 AMK01_RS04475 5598a5b7bd4f9aae9eaf36de03e3d8a4 446 PANTHER PTHR11706:SF33 10 446 2.1E-196 T 14-09-2016 AMK01_RS19700 5be30c297a8d5c6ea1bb6e607e9351fb 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 2.4E-13 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS19700 5be30c297a8d5c6ea1bb6e607e9351fb 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 2.4E-13 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS19700 5be30c297a8d5c6ea1bb6e607e9351fb 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 2.4E-13 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS19700 5be30c297a8d5c6ea1bb6e607e9351fb 377 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 253 9.0E-56 T 14-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK01_RS19700 5be30c297a8d5c6ea1bb6e607e9351fb 377 Gene3D G3DSA:3.40.710.10 32 271 4.9E-80 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS19700 5be30c297a8d5c6ea1bb6e607e9351fb 377 SUPERFAMILY SSF56601 12 270 5.77E-68 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS19700 5be30c297a8d5c6ea1bb6e607e9351fb 377 PANTHER PTHR21581 17 270 4.2E-60 T 14-09-2016 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 SUPERFAMILY SSF50129 1 95 2.26E-36 T 14-09-2016 IPR011032 GroES-like AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 Gene3D G3DSA:2.30.33.40 2 95 2.5E-39 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.704 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 1.9E-36 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 PRINTS PR00297 10kDa chaperonin signature 60 72 2.1E-34 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 PRINTS PR00297 10kDa chaperonin signature 81 94 2.1E-34 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 PRINTS PR00297 10kDa chaperonin signature 3 18 2.1E-34 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 PRINTS PR00297 10kDa chaperonin signature 25 46 2.1E-34 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 PANTHER PTHR10772 1 104 1.6E-50 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 SMART SM00883 2 94 2.8E-62 T 14-09-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK01_RS06365 7cb3bdfab2bad812e20d383678317109 104 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-09-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 SUPERFAMILY SSF46689 24 102 3.4E-21 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 78 9.2E-18 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 PANTHER PTHR30055:SF76 11 218 2.0E-38 T 14-09-2016 AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 SUPERFAMILY SSF48498 97 214 2.92E-5 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 7.7E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 7.7E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 163 218 1.7E-19 T 14-09-2016 AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 PANTHER PTHR30055 11 218 2.0E-38 T 14-09-2016 AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 ProSitePatterns PS01081 TetR-type HTH domain signature. 44 74 - T 14-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMK01_RS18865 5881f51b2d7d97745878df21f0a258ed 226 Gene3D G3DSA:1.10.357.10 23 219 2.8E-54 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 PANTHER PTHR10520 1 421 5.5E-255 T 14-09-2016 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 14-09-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 Gene3D G3DSA:3.90.600.10 327 418 9.9E-33 T 14-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 SUPERFAMILY SSF51246 325 418 2.12E-28 T 14-09-2016 IPR011054 Rudiment single hybrid motif AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 SMART SM01210 326 418 2.4E-48 T 14-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.8E-35 T 14-09-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 416 3.8E-27 T 14-09-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 Gene3D G3DSA:3.30.470.20 188 324 9.2E-62 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 41.925 T 14-09-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 9.3E-78 T 14-09-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 SMART SM01209 101 292 9.8E-130 T 14-09-2016 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 Gene3D G3DSA:3.40.50.20 2 93 2.4E-36 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 SUPERFAMILY SSF56059 102 320 1.68E-59 T 14-09-2016 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 419 6.1E-162 T 14-09-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 SUPERFAMILY SSF52440 1 101 1.73E-35 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS04515 bf22d1a50a3766be0e2870c24229d09e 427 Gene3D G3DSA:3.30.1490.20 119 187 2.7E-27 T 14-09-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK01_RS03895 d2d3fa7a78952927be427fe90c329f9c 350 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 212 326 2.5E-16 T 14-09-2016 IPR012328 Chalcone/stilbene synthase, C-terminal AMK01_RS03895 d2d3fa7a78952927be427fe90c329f9c 350 Gene3D G3DSA:3.40.47.10 4 205 2.2E-55 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS03895 d2d3fa7a78952927be427fe90c329f9c 350 PANTHER PTHR11877:SF10 5 348 1.3E-65 T 14-09-2016 AMK01_RS03895 d2d3fa7a78952927be427fe90c329f9c 350 SUPERFAMILY SSF53901 4 348 2.88E-51 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS03895 d2d3fa7a78952927be427fe90c329f9c 350 PIRSF PIRSF000451 1 350 1.6E-116 T 14-09-2016 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 AMK01_RS03895 d2d3fa7a78952927be427fe90c329f9c 350 PANTHER PTHR11877 5 348 1.3E-65 T 14-09-2016 AMK01_RS03895 d2d3fa7a78952927be427fe90c329f9c 350 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 7 203 9.9E-22 T 14-09-2016 IPR001099 Chalcone/stilbene synthase, N-terminal AMK01_RS03895 d2d3fa7a78952927be427fe90c329f9c 350 Gene3D G3DSA:3.40.47.10 210 348 1.1E-36 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS15690 0acd00f6355f924c4ffb257c86bfd232 153 SUPERFAMILY SSF55785 38 133 1.07E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS15690 0acd00f6355f924c4ffb257c86bfd232 153 Gene3D G3DSA:3.30.450.20 38 133 3.0E-7 T 14-09-2016 AMK01_RS15690 0acd00f6355f924c4ffb257c86bfd232 153 Pfam PF08447 PAS fold 50 128 4.3E-6 T 14-09-2016 IPR013655 PAS fold-3 GO:0005515 AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 PANTHER PTHR14859 89 158 5.3E-25 T 14-09-2016 IPR027317 PGAP2-interacting protein AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 PANTHER PTHR14859 1 72 5.3E-25 T 14-09-2016 IPR027317 PGAP2-interacting protein AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 Gene3D G3DSA:3.60.10.10 2 286 5.4E-26 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 PANTHER PTHR14859:SF0 89 158 5.3E-25 T 14-09-2016 AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 PANTHER PTHR14859:SF0 1 72 5.3E-25 T 14-09-2016 AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 PANTHER PTHR14859 176 286 5.3E-25 T 14-09-2016 IPR027317 PGAP2-interacting protein AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 279 2.8E-19 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 PANTHER PTHR14859:SF0 176 286 5.3E-25 T 14-09-2016 AMK01_RS20890 bce6ebd26628209130904083e94a7d57 300 SUPERFAMILY SSF56219 2 286 1.57E-36 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS07770 826ff4923d7d960cdc79e18a5808652b 115 SMART SM00448 2 109 4.4E-10 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS07770 826ff4923d7d960cdc79e18a5808652b 115 SUPERFAMILY SSF52172 1 114 4.55E-20 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS07770 826ff4923d7d960cdc79e18a5808652b 115 PANTHER PTHR26402 2 112 5.9E-12 T 14-09-2016 AMK01_RS07770 826ff4923d7d960cdc79e18a5808652b 115 Gene3D G3DSA:3.40.50.2300 1 113 1.6E-18 T 14-09-2016 AMK01_RS07770 826ff4923d7d960cdc79e18a5808652b 115 Pfam PF00072 Response regulator receiver domain 4 109 1.6E-11 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03385 475960f2be8ee5577c41150a75c5f332 121 Gene3D G3DSA:3.40.50.2300 2 120 4.3E-38 T 14-09-2016 AMK01_RS03385 475960f2be8ee5577c41150a75c5f332 121 PANTHER PTHR26402 3 119 6.9E-39 T 14-09-2016 AMK01_RS03385 475960f2be8ee5577c41150a75c5f332 121 Pfam PF00072 Response regulator receiver domain 5 117 1.4E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03385 475960f2be8ee5577c41150a75c5f332 121 SUPERFAMILY SSF52172 3 120 1.39E-36 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS03385 475960f2be8ee5577c41150a75c5f332 121 SMART SM00448 3 116 1.0E-35 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03075 8a9576ec361a654d6f9e6175fe2818e3 430 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 427 1.4E-163 T 14-09-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS03075 8a9576ec361a654d6f9e6175fe2818e3 430 Gene3D G3DSA:3.65.10.10 21 231 4.8E-68 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK01_RS03075 8a9576ec361a654d6f9e6175fe2818e3 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 418 1.3E-93 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK01_RS03075 8a9576ec361a654d6f9e6175fe2818e3 430 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 428 44.344 T 14-09-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS03075 8a9576ec361a654d6f9e6175fe2818e3 430 Gene3D G3DSA:3.65.10.10 232 428 1.1E-55 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK01_RS03075 8a9576ec361a654d6f9e6175fe2818e3 430 SUPERFAMILY SSF55205 1 429 1.96E-129 T 14-09-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMK01_RS03075 8a9576ec361a654d6f9e6175fe2818e3 430 PANTHER PTHR21090 1 430 9.8E-165 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 Pfam PF13481 AAA domain 68 221 4.8E-19 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PRINTS PR01874 DNA repair protein radA signature 321 344 9.5E-88 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PRINTS PR01874 DNA repair protein radA signature 122 139 9.5E-88 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PRINTS PR01874 DNA repair protein radA signature 173 197 9.5E-88 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PRINTS PR01874 DNA repair protein radA signature 80 108 9.5E-88 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PRINTS PR01874 DNA repair protein radA signature 247 273 9.5E-88 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PRINTS PR01874 DNA repair protein radA signature 10 34 9.5E-88 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PRINTS PR01874 DNA repair protein radA signature 212 240 9.5E-88 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 Gene3D G3DSA:3.30.230.10 284 430 1.6E-30 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PANTHER PTHR32472:SF10 1 432 1.5E-188 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 Gene3D G3DSA:3.40.50.300 66 276 4.5E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 PANTHER PTHR32472 1 432 1.5E-188 T 14-09-2016 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 SMART SM00382 88 243 3.1E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 SUPERFAMILY SSF54211 254 268 9.1E-36 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 SUPERFAMILY SSF54211 302 430 9.1E-36 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 SUPERFAMILY SSF52540 65 288 6.75E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 431 1.4E-167 T 14-09-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMK01_RS07320 a7ce004bc93f73d8c0ab8b9eebf2133d 465 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 428 8.0E-8 T 14-09-2016 AMK01_RS09300 ae1fbf3852d227129351abea9d08378a 196 Pfam PF14345 GDYXXLXY protein 25 183 1.4E-39 T 14-09-2016 IPR025833 GDYXXLXY protein AMK01_RS16235 7ec0d466b76c70c61988f25a7b4fc2aa 217 Gene3D G3DSA:3.40.630.30 67 143 1.5E-6 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS16235 7ec0d466b76c70c61988f25a7b4fc2aa 217 Pfam PF00583 Acetyltransferase (GNAT) family 104 143 3.2E-4 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS16235 7ec0d466b76c70c61988f25a7b4fc2aa 217 SUPERFAMILY SSF55729 53 143 2.48E-7 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS14430 3328d723052d2dd330fba6ed00a16dee 332 Pfam PF00700 Bacterial flagellin C-terminal helical region 244 325 3.5E-16 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS14430 3328d723052d2dd330fba6ed00a16dee 332 Pfam PF00669 Bacterial flagellin N-terminal helical region 13 132 2.2E-18 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS14430 3328d723052d2dd330fba6ed00a16dee 332 Gene3D G3DSA:1.20.1330.10 232 284 5.4E-13 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS14430 3328d723052d2dd330fba6ed00a16dee 332 Gene3D G3DSA:1.20.1330.10 53 173 5.4E-13 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS14430 3328d723052d2dd330fba6ed00a16dee 332 SUPERFAMILY SSF64518 2 330 4.32E-51 T 14-09-2016 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 SUPERFAMILY SSF48452 344 536 1.39E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 SMART SM00028 403 436 0.0036 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 SMART SM00028 472 505 56.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 SMART SM00028 437 470 200.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 Gene3D G3DSA:1.25.40.10 342 535 6.0E-27 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 Pfam PF07719 Tetratricopeptide repeat 407 436 4.4E-5 T 14-09-2016 IPR013105 Tetratricopeptide repeat 2 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 PANTHER PTHR23083 343 527 8.1E-18 T 14-09-2016 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 12 140 2.8E-11 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 Gene3D G3DSA:3.30.70.1230 9 171 5.9E-24 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 Gene3D G3DSA:3.40.50.10070 186 309 8.7E-5 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK01_RS05355 12fb71ff6c2fe1efdff213e68e9d6b94 568 SUPERFAMILY SSF55073 5 172 2.83E-41 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 294 33.96 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 Gene3D G3DSA:1.10.287.80 244 289 5.7E-28 T 14-09-2016 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 PANTHER PTHR11693 1 294 2.3E-121 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 SUPERFAMILY SSF52943 3 294 1.7E-89 T 14-09-2016 IPR023633 ATPase, F1 complex, gamma subunit domain AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 280 293 - T 14-09-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 294 9.3E-103 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 2.3E-31 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 PRINTS PR00126 ATP synthase gamma subunit signature 241 260 2.3E-31 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 2.3E-31 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 PRINTS PR00126 ATP synthase gamma subunit signature 272 293 2.3E-31 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 Gene3D G3DSA:1.10.287.80 19 60 4.9E-32 T 14-09-2016 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 Gene3D G3DSA:1.10.287.80 209 243 4.9E-32 T 14-09-2016 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 Pfam PF00231 ATP synthase 3 294 2.2E-92 T 14-09-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 PIRSF PIRSF039089 1 294 1.8E-107 T 14-09-2016 AMK01_RS19905 fed874a0ba7a5d57489ad02422c2f6d8 294 Gene3D G3DSA:3.40.1380.10 70 195 1.4E-35 T 14-09-2016 AMK01_RS00440 ee93d3bd50a1bc489a50c96fd0ee9d1f 357 Gene3D G3DSA:3.40.50.720 5 140 4.8E-41 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00440 ee93d3bd50a1bc489a50c96fd0ee9d1f 357 Gene3D G3DSA:3.30.360.10 141 340 1.1E-33 T 14-09-2016 AMK01_RS00440 ee93d3bd50a1bc489a50c96fd0ee9d1f 357 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.1E-22 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS00440 ee93d3bd50a1bc489a50c96fd0ee9d1f 357 SUPERFAMILY SSF55347 131 284 2.18E-23 T 14-09-2016 AMK01_RS00440 ee93d3bd50a1bc489a50c96fd0ee9d1f 357 PANTHER PTHR22604 6 350 2.1E-59 T 14-09-2016 AMK01_RS00440 ee93d3bd50a1bc489a50c96fd0ee9d1f 357 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 235 3.5E-8 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS00440 ee93d3bd50a1bc489a50c96fd0ee9d1f 357 SUPERFAMILY SSF51735 5 156 2.25E-42 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00440 ee93d3bd50a1bc489a50c96fd0ee9d1f 357 PANTHER PTHR22604:SF120 6 350 2.1E-59 T 14-09-2016 AMK01_RS11830 7fdfb668ca6407c4e8ba81ef49a4f757 290 PANTHER PTHR11807:SF16 30 284 4.6E-84 T 14-09-2016 AMK01_RS11830 7fdfb668ca6407c4e8ba81ef49a4f757 290 PANTHER PTHR11807 30 284 4.6E-84 T 14-09-2016 AMK01_RS11830 7fdfb668ca6407c4e8ba81ef49a4f757 290 Gene3D G3DSA:3.40.50.620 44 225 1.4E-19 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS11830 7fdfb668ca6407c4e8ba81ef49a4f757 290 Pfam PF01171 PP-loop family 61 224 1.6E-13 T 14-09-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMK01_RS11830 7fdfb668ca6407c4e8ba81ef49a4f757 290 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 29 290 52.138 T 14-09-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AMK01_RS11830 7fdfb668ca6407c4e8ba81ef49a4f757 290 PIRSF PIRSF004976 23 287 1.4E-68 T 14-09-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AMK01_RS11830 7fdfb668ca6407c4e8ba81ef49a4f757 290 SUPERFAMILY SSF52402 36 255 4.72E-50 T 14-09-2016 AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PANTHER PTHR24322 11 140 8.0E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PANTHER PTHR24322 157 193 8.0E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.2E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.2E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.2E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.2E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.2E-22 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 Pfam PF00106 short chain dehydrogenase 7 198 2.3E-54 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 3.9E-4 T 14-09-2016 AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.4E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.4E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.4E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 SUPERFAMILY SSF51735 3 232 2.32E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09990 2ae54550f51480825984f003e67ada6c 267 Gene3D G3DSA:3.40.50.720 2 228 3.7E-63 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14285 0d255356e3c1dbebbf87377c2931ca73 273 SUPERFAMILY SSF51735 1 143 1.08E-18 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14285 0d255356e3c1dbebbf87377c2931ca73 273 PANTHER PTHR10366 2 76 8.3E-14 T 14-09-2016 AMK01_RS14285 0d255356e3c1dbebbf87377c2931ca73 273 Pfam PF13781 DoxX-like family 167 264 8.6E-22 T 14-09-2016 IPR025695 DoxX-like family AMK01_RS14285 0d255356e3c1dbebbf87377c2931ca73 273 Pfam PF13460 NAD(P)H-binding 7 79 2.2E-9 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14285 0d255356e3c1dbebbf87377c2931ca73 273 PANTHER PTHR10366:SF418 2 76 8.3E-14 T 14-09-2016 AMK01_RS14285 0d255356e3c1dbebbf87377c2931ca73 273 Gene3D G3DSA:3.40.50.720 1 88 2.0E-18 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18995 483f5a5b249001ce270991588232d187 527 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 4 519 9.6E-146 T 14-09-2016 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK01_RS18995 483f5a5b249001ce270991588232d187 527 Gene3D G3DSA:3.30.420.40 272 519 1.3E-50 T 14-09-2016 AMK01_RS18995 483f5a5b249001ce270991588232d187 527 Gene3D G3DSA:3.30.420.40 2 261 5.0E-60 T 14-09-2016 AMK01_RS18995 483f5a5b249001ce270991588232d187 527 SUPERFAMILY SSF53067 270 521 1.13E-51 T 14-09-2016 AMK01_RS18995 483f5a5b249001ce270991588232d187 527 PANTHER PTHR10196 1 511 9.2E-171 T 14-09-2016 AMK01_RS18995 483f5a5b249001ce270991588232d187 527 SUPERFAMILY SSF53067 4 261 1.5E-53 T 14-09-2016 AMK01_RS18995 483f5a5b249001ce270991588232d187 527 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 277 476 7.2E-46 T 14-09-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMK01_RS18995 483f5a5b249001ce270991588232d187 527 PANTHER PTHR10196:SF71 1 511 9.2E-171 T 14-09-2016 AMK01_RS18995 483f5a5b249001ce270991588232d187 527 PIRSF PIRSF000538 2 526 3.2E-74 T 14-09-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS18995 483f5a5b249001ce270991588232d187 527 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 260 8.7E-28 T 14-09-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 SUPERFAMILY SSF144052 15 417 1.1E-142 T 14-09-2016 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 Pfam PF02073 Thermophilic metalloprotease (M29) 15 416 5.3E-166 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 309 329 4.1E-73 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 397 416 4.1E-73 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 164 186 4.1E-73 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 88 107 4.1E-73 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 253 272 4.1E-73 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 371 393 4.1E-73 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 332 353 4.1E-73 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 23 40 4.1E-73 T 14-09-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PANTHER PTHR34448:SF3 15 417 1.9E-213 T 14-09-2016 AMK01_RS01585 c44e047ec05928530331fafb1fc79d61 417 PANTHER PTHR34448 15 417 1.9E-213 T 14-09-2016 AMK01_RS17990 b824211946eaeac04d36f7a6b5d7009b 867 PANTHER PTHR34697 16 858 5.5E-227 T 14-09-2016 AMK01_RS17990 b824211946eaeac04d36f7a6b5d7009b 867 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 552 839 1.4E-96 T 14-09-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AMK01_RS17990 b824211946eaeac04d36f7a6b5d7009b 867 PANTHER PTHR34697:SF2 16 858 5.5E-227 T 14-09-2016 AMK01_RS17990 b824211946eaeac04d36f7a6b5d7009b 867 SUPERFAMILY SSF55729 660 837 1.31E-15 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 470 4.2E-60 T 14-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 PANTHER PTHR11748:SF78 14 472 2.8E-166 T 14-09-2016 AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 PANTHER PTHR11748 14 472 2.8E-166 T 14-09-2016 AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 Pfam PF01565 FAD binding domain 56 194 2.1E-41 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 SUPERFAMILY SSF55103 234 472 8.67E-65 T 14-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 SUPERFAMILY SSF56176 20 231 1.03E-69 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 Gene3D G3DSA:3.30.43.10 16 110 3.0E-28 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 Gene3D G3DSA:1.10.45.10 431 470 1.9E-5 T 14-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMK01_RS04130 2a70a61be293899264bd8fe664db8698 479 Gene3D G3DSA:3.30.465.10 112 231 1.0E-33 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS12805 c34f05a13502eff759343a0f0d323005 239 PANTHER PTHR33778 8 155 1.6E-30 T 14-09-2016 AMK01_RS12805 c34f05a13502eff759343a0f0d323005 239 Pfam PF02308 MgtC family 23 151 2.8E-27 T 14-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK01_RS12805 c34f05a13502eff759343a0f0d323005 239 PRINTS PR01837 MgtC/SapB protein signature 80 102 7.1E-28 T 14-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK01_RS12805 c34f05a13502eff759343a0f0d323005 239 PRINTS PR01837 MgtC/SapB protein signature 107 131 7.1E-28 T 14-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK01_RS12805 c34f05a13502eff759343a0f0d323005 239 PRINTS PR01837 MgtC/SapB protein signature 44 62 7.1E-28 T 14-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK01_RS12805 c34f05a13502eff759343a0f0d323005 239 PRINTS PR01837 MgtC/SapB protein signature 25 44 7.1E-28 T 14-09-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 Pfam PF02556 Preprotein translocase subunit SecB 10 148 8.8E-55 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 78 98 3.9E-26 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 102 124 3.9E-26 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 128 146 3.9E-26 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 17 34 3.9E-26 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 147 1.1E-41 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 PANTHER PTHR36918 1 151 4.4E-48 T 14-09-2016 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 PANTHER PTHR36918:SF1 1 151 4.4E-48 T 14-09-2016 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 Hamap MF_00821 Protein-export protein SecB [secB]. 1 150 31.999 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 Gene3D G3DSA:3.10.420.10 8 154 6.2E-60 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS00035 cefe96fddc4b0300e893c18ec47825da 160 SUPERFAMILY SSF54611 4 146 3.05E-51 T 14-09-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 SUPERFAMILY SSF52540 3 165 3.22E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 PIRSF PIRSF006485 1 468 5.0E-158 T 14-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 201 368 4.3E-25 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 159 6.7E-27 T 14-09-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 Hamap MF_00195 GTPase Der [der]. 2 463 36.264 T 14-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 54 69 6.3E-6 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.3E-6 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 Pfam PF01926 50S ribosome-binding GTPase 204 322 6.6E-20 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.8E-28 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 PANTHER PTHR11649 1 168 3.7E-190 T 14-09-2016 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 460 7.0E-166 T 14-09-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 PANTHER PTHR11649 188 457 3.7E-190 T 14-09-2016 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 380 460 9.0E-30 T 14-09-2016 IPR032859 GTPase Der, C-terminal KH-domain-like AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 Gene3D G3DSA:3.40.50.300 2 173 5.0E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 Gene3D G3DSA:3.40.50.300 200 386 1.1E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 SUPERFAMILY SSF52540 138 167 1.91E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 SUPERFAMILY SSF52540 200 466 1.91E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 PANTHER PTHR11649:SF68 1 168 3.7E-190 T 14-09-2016 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 PANTHER PTHR11649:SF68 188 457 3.7E-190 T 14-09-2016 AMK01_RS15815 7547f543c471561e11474d1d344b5b5b 473 Gene3D G3DSA:3.30.300.20 387 461 3.4E-29 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 PANTHER PTHR24220 7 316 1.3E-149 T 14-09-2016 AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 228 293 4.6E-18 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 Gene3D G3DSA:3.40.50.300 4 250 7.8E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 PANTHER PTHR24220:SF336 7 316 1.3E-149 T 14-09-2016 AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 Pfam PF00005 ABC transporter 25 176 1.5E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 SMART SM00382 34 226 4.8E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 SUPERFAMILY SSF52540 5 248 4.78E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03210 39299b9d0459c0f8769dfdfa32b36ffd 317 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 226 312 1.3E-24 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS14805 885d48ab9e9c53ac5d1ab645d50a7827 384 Gene3D G3DSA:3.40.50.1970 9 193 4.4E-53 T 14-09-2016 AMK01_RS14805 885d48ab9e9c53ac5d1ab645d50a7827 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 182 210 - T 14-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMK01_RS14805 885d48ab9e9c53ac5d1ab645d50a7827 384 SUPERFAMILY SSF56796 9 383 8.11E-123 T 14-09-2016 AMK01_RS14805 885d48ab9e9c53ac5d1ab645d50a7827 384 Gene3D G3DSA:1.20.1090.10 194 384 8.1E-58 T 14-09-2016 AMK01_RS14805 885d48ab9e9c53ac5d1ab645d50a7827 384 PANTHER PTHR11496 5 384 1.6E-103 T 14-09-2016 AMK01_RS14805 885d48ab9e9c53ac5d1ab645d50a7827 384 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 268 288 - T 14-09-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMK01_RS14805 885d48ab9e9c53ac5d1ab645d50a7827 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 374 9.7E-111 T 14-09-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 AMK01_RS20655 8fca4a558fe126afc50653371486b5dc 134 Pfam PF01479 S4 domain 13 60 3.8E-13 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS20655 8fca4a558fe126afc50653371486b5dc 134 Gene3D G3DSA:3.10.290.10 12 104 1.4E-27 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS20655 8fca4a558fe126afc50653371486b5dc 134 SMART SM00363 13 78 1.8E-12 T 14-09-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK01_RS20655 8fca4a558fe126afc50653371486b5dc 134 SUPERFAMILY SSF55174 12 95 1.16E-23 T 14-09-2016 AMK01_RS10970 a877fe64edf3319adff360d1c819de0a 232 PANTHER PTHR30614 1 228 1.4E-66 T 14-09-2016 AMK01_RS10970 a877fe64edf3319adff360d1c819de0a 232 Gene3D G3DSA:1.10.3720.10 12 216 6.0E-37 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10970 a877fe64edf3319adff360d1c819de0a 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 4.1E-21 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS10970 a877fe64edf3319adff360d1c819de0a 232 SUPERFAMILY SSF161098 13 214 1.7E-34 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10970 a877fe64edf3319adff360d1c819de0a 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 219 1.1E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS16385 c5edf7610bac10564a2f9ef4203a84f9 229 Gene3D G3DSA:3.40.50.850 5 211 5.2E-42 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS16385 c5edf7610bac10564a2f9ef4203a84f9 229 Pfam PF00857 Isochorismatase family 13 170 8.2E-25 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS16385 c5edf7610bac10564a2f9ef4203a84f9 229 SUPERFAMILY SSF52499 2 209 2.35E-41 T 14-09-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AMK01_RS16385 c5edf7610bac10564a2f9ef4203a84f9 229 PANTHER PTHR14119 1 207 2.3E-109 T 14-09-2016 AMK01_RS16385 c5edf7610bac10564a2f9ef4203a84f9 229 PANTHER PTHR14119:SF1 1 207 2.3E-109 T 14-09-2016 AMK01_RS17795 ee1c57ede196044cdddf648649b0147a 254 PANTHER PTHR24220:SF358 6 245 2.4E-90 T 14-09-2016 AMK01_RS17795 ee1c57ede196044cdddf648649b0147a 254 PANTHER PTHR24220 6 245 2.4E-90 T 14-09-2016 AMK01_RS17795 ee1c57ede196044cdddf648649b0147a 254 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS17795 ee1c57ede196044cdddf648649b0147a 254 SMART SM00382 29 222 7.5E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17795 ee1c57ede196044cdddf648649b0147a 254 Gene3D G3DSA:3.40.50.300 2 243 2.5E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17795 ee1c57ede196044cdddf648649b0147a 254 SUPERFAMILY SSF52540 3 246 7.24E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17795 ee1c57ede196044cdddf648649b0147a 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 245 2.5E-7 T 14-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK01_RS17795 ee1c57ede196044cdddf648649b0147a 254 Pfam PF00005 ABC transporter 21 175 4.5E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS15395 2efb1baab6bac3490fb42d81c0536d9c 366 SUPERFAMILY SSF53335 7 356 8.81E-106 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS15395 2efb1baab6bac3490fb42d81c0536d9c 366 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 62 296 6.5E-66 T 14-09-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA AMK01_RS15395 2efb1baab6bac3490fb42d81c0536d9c 366 PANTHER PTHR12049 9 352 1.4E-104 T 14-09-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA AMK01_RS15395 2efb1baab6bac3490fb42d81c0536d9c 366 PANTHER PTHR12049:SF7 9 352 1.4E-104 T 14-09-2016 AMK01_RS01130 f9d47a37442db7e723529226965961d7 189 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 93 104 - T 14-09-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMK01_RS01130 f9d47a37442db7e723529226965961d7 189 SUPERFAMILY SSF50630 72 175 1.76E-19 T 14-09-2016 IPR021109 Aspartic peptidase domain AMK01_RS01130 f9d47a37442db7e723529226965961d7 189 PANTHER PTHR41535:SF1 58 185 1.3E-25 T 14-09-2016 AMK01_RS01130 f9d47a37442db7e723529226965961d7 189 Gene3D G3DSA:2.40.70.10 73 169 4.0E-4 T 14-09-2016 IPR021109 Aspartic peptidase domain AMK01_RS01130 f9d47a37442db7e723529226965961d7 189 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 70 189 5.9E-42 T 14-09-2016 IPR011969 Clan AA aspartic peptidase, C-terminal AMK01_RS01130 f9d47a37442db7e723529226965961d7 189 Pfam PF13975 gag-polyprotein putative aspartyl protease 84 173 3.0E-24 T 14-09-2016 AMK01_RS01130 f9d47a37442db7e723529226965961d7 189 PANTHER PTHR41535 58 185 1.3E-25 T 14-09-2016 AMK01_RS03205 8c78e6c5749d54e0de647a1fa92f26b3 312 PANTHER PTHR12128 3 300 1.3E-14 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03205 8c78e6c5749d54e0de647a1fa92f26b3 312 SUPERFAMILY SSF51569 6 302 4.08E-40 T 14-09-2016 AMK01_RS03205 8c78e6c5749d54e0de647a1fa92f26b3 312 Pfam PF00701 Dihydrodipicolinate synthetase family 14 252 1.5E-13 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03205 8c78e6c5749d54e0de647a1fa92f26b3 312 PIRSF PIRSF001365 5 306 2.1E-32 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03205 8c78e6c5749d54e0de647a1fa92f26b3 312 SMART SM01130 9 306 6.1E-22 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03205 8c78e6c5749d54e0de647a1fa92f26b3 312 Gene3D G3DSA:3.20.20.70 10 301 2.0E-36 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS06260 751ddf9bfe1586c14f3ca942b9d9a531 90 PANTHER PTHR33677 1 90 1.3E-22 T 14-09-2016 AMK01_RS06260 751ddf9bfe1586c14f3ca942b9d9a531 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 4.7E-22 T 14-09-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AMK01_RS18525 7aebfdc9ea70b3cad26c543a162bd471 292 SMART SM00460 176 247 6.3E-15 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS18525 7aebfdc9ea70b3cad26c543a162bd471 292 PANTHER PTHR33490 3 291 2.3E-53 T 14-09-2016 AMK01_RS18525 7aebfdc9ea70b3cad26c543a162bd471 292 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 83 7.0E-16 T 14-09-2016 IPR013589 Bacterial transglutaminase-like, N-terminal AMK01_RS18525 7aebfdc9ea70b3cad26c543a162bd471 292 SUPERFAMILY SSF54001 139 279 5.19E-40 T 14-09-2016 AMK01_RS18525 7aebfdc9ea70b3cad26c543a162bd471 292 PANTHER PTHR33490:SF6 3 291 2.3E-53 T 14-09-2016 AMK01_RS18525 7aebfdc9ea70b3cad26c543a162bd471 292 Gene3D G3DSA:3.90.260.10 154 248 5.7E-13 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS18525 7aebfdc9ea70b3cad26c543a162bd471 292 Pfam PF01841 Transglutaminase-like superfamily 134 245 2.2E-21 T 14-09-2016 IPR002931 Transglutaminase-like AMK01_RS18190 f83c95dde75f5655b5515539ba5312c3 590 SUPERFAMILY SSF58104 345 506 1.24E-7 T 14-09-2016 AMK01_RS18190 f83c95dde75f5655b5515539ba5312c3 590 Gene3D G3DSA:1.10.287.950 300 496 1.4E-7 T 14-09-2016 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 Gene3D G3DSA:3.40.190.10 140 314 1.2E-63 T 14-09-2016 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 3.6E-65 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 SUPERFAMILY SSF53850 26 364 3.95E-99 T 14-09-2016 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PANTHER PTHR30222 1 365 5.9E-147 T 14-09-2016 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 Pfam PF13416 Bacterial extracellular solute-binding protein 43 330 4.7E-31 T 14-09-2016 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 Gene3D G3DSA:3.40.190.10 29 139 8.5E-16 T 14-09-2016 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PANTHER PTHR30222:SF11 1 365 5.9E-147 T 14-09-2016 AMK01_RS03780 06cb46fcfe24835f858bee8c1fa2e47d 365 PIRSF PIRSF019574 1 365 3.1E-142 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS20580 4f3e2653180435c630984147178d76e5 397 Pfam PF07690 Major Facilitator Superfamily 24 327 2.3E-24 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS20580 4f3e2653180435c630984147178d76e5 397 Gene3D G3DSA:1.20.1250.20 21 204 1.1E-21 T 14-09-2016 AMK01_RS20580 4f3e2653180435c630984147178d76e5 397 SUPERFAMILY SSF103473 12 385 8.89E-47 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS20580 4f3e2653180435c630984147178d76e5 397 Gene3D G3DSA:1.20.1250.20 213 382 3.1E-16 T 14-09-2016 AMK01_RS20580 4f3e2653180435c630984147178d76e5 397 PANTHER PTHR23514 17 386 1.1E-103 T 14-09-2016 AMK01_RS20580 4f3e2653180435c630984147178d76e5 397 PANTHER PTHR23514:SF13 17 386 1.1E-103 T 14-09-2016 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 Gene3D G3DSA:1.10.3810.10 57 235 1.2E-68 T 14-09-2016 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 Pfam PF17092 Penicillin-binding protein OB-like domain 322 440 8.4E-22 T 14-09-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 PANTHER PTHR32282:SF5 436 624 9.3E-244 T 14-09-2016 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 PANTHER PTHR32282 644 808 9.3E-244 T 14-09-2016 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 SUPERFAMILY SSF53955 43 256 4.22E-71 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 738 4.9E-189 T 14-09-2016 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 Gene3D G3DSA:3.40.710.10 435 785 8.5E-144 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 Gene3D G3DSA:3.40.710.10 236 319 8.5E-144 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 SUPERFAMILY SSF56601 267 319 2.91E-137 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 SUPERFAMILY SSF56601 215 237 2.91E-137 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 SUPERFAMILY SSF56601 437 790 2.91E-137 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 Pfam PF00912 Transglycosylase 56 233 6.0E-59 T 14-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 Pfam PF00905 Penicillin binding protein transpeptidase domain 442 734 2.5E-40 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 PANTHER PTHR32282 436 624 9.3E-244 T 14-09-2016 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 PANTHER PTHR32282:SF5 1 316 9.3E-244 T 14-09-2016 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 PANTHER PTHR32282:SF5 644 808 9.3E-244 T 14-09-2016 AMK01_RS08310 c090abf4a8de64ae2b1c131d397b483b 819 PANTHER PTHR32282 1 316 9.3E-244 T 14-09-2016 AMK01_RS13660 76f45bc50cd45b498e00d1c0f3ea8318 424 Gene3D G3DSA:3.40.190.10 40 169 2.1E-19 T 14-09-2016 AMK01_RS13660 76f45bc50cd45b498e00d1c0f3ea8318 424 PANTHER PTHR30061 23 371 1.0E-49 T 14-09-2016 AMK01_RS13660 76f45bc50cd45b498e00d1c0f3ea8318 424 Gene3D G3DSA:3.40.190.10 170 356 5.6E-30 T 14-09-2016 AMK01_RS13660 76f45bc50cd45b498e00d1c0f3ea8318 424 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 11 30 1.3E-6 T 14-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMK01_RS13660 76f45bc50cd45b498e00d1c0f3ea8318 424 SUPERFAMILY SSF53850 38 422 3.78E-60 T 14-09-2016 AMK01_RS13660 76f45bc50cd45b498e00d1c0f3ea8318 424 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 39 3.3E-6 T 14-09-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMK01_RS13660 76f45bc50cd45b498e00d1c0f3ea8318 424 Pfam PF01547 Bacterial extracellular solute-binding protein 55 339 7.9E-30 T 14-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK01_RS11450 995a22ff954a10ca0f3d7df472c50e58 261 Pfam PF07542 ATP12 chaperone protein 31 148 4.8E-37 T 14-09-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 AMK01_RS11450 995a22ff954a10ca0f3d7df472c50e58 261 PANTHER PTHR21013:SF11 1 242 4.1E-63 T 14-09-2016 AMK01_RS11450 995a22ff954a10ca0f3d7df472c50e58 261 SUPERFAMILY SSF160909 2 257 3.14E-90 T 14-09-2016 AMK01_RS11450 995a22ff954a10ca0f3d7df472c50e58 261 Gene3D G3DSA:3.30.2180.10 1 87 3.9E-28 T 14-09-2016 AMK01_RS11450 995a22ff954a10ca0f3d7df472c50e58 261 PANTHER PTHR21013 1 242 4.1E-63 T 14-09-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 AMK01_RS11450 995a22ff954a10ca0f3d7df472c50e58 261 Gene3D G3DSA:1.10.3580.10 90 259 5.1E-59 T 14-09-2016 IPR023335 Orthogonal Bundle domain in ATP12 AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 SUPERFAMILY SSF53901 224 420 1.11E-60 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 418 7.7E-158 T 14-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 14-09-2016 IPR018201 Beta-ketoacyl synthase, active site AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 SMART SM00825 Beta-ketoacyl synthase 4 420 7.2E-12 T 14-09-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 255 8.6E-54 T 14-09-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 PIRSF PIRSF000447 1 421 8.9E-156 T 14-09-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 PANTHER PTHR11712 1 420 3.6E-170 T 14-09-2016 AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 263 376 4.3E-32 T 14-09-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 SUPERFAMILY SSF53901 1 260 1.11E-71 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 Gene3D G3DSA:3.40.47.10 6 268 1.7E-71 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS10875 0befab282c9aaaf9a9a22f37146248e1 421 Gene3D G3DSA:3.40.47.10 273 420 6.0E-53 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS03935 021ee8a8f96cf0301ee483bf8b394d07 291 Pfam PF01061 ABC-2 type transporter 39 252 6.3E-22 T 14-09-2016 IPR013525 ABC-2 type transporter GO:0016020 AMK01_RS03935 021ee8a8f96cf0301ee483bf8b394d07 291 PANTHER PTHR30413 17 291 7.8E-56 T 14-09-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK01_RS03935 021ee8a8f96cf0301ee483bf8b394d07 291 PANTHER PTHR30413:SF8 17 291 7.8E-56 T 14-09-2016 AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 Gene3D G3DSA:1.10.8.60 407 453 7.3E-9 T 14-09-2016 AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 SMART SM00382 252 393 2.2E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 Pfam PF01434 Peptidase family M41 462 647 5.2E-20 T 14-09-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 257 391 4.1E-29 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 SUPERFAMILY SSF140990 462 648 1.11E-31 T 14-09-2016 AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 Gene3D G3DSA:3.40.50.300 252 406 8.5E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 SUPERFAMILY SSF52540 237 450 2.54E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 PANTHER PTHR23076 254 647 2.6E-50 T 14-09-2016 AMK01_RS10250 15f47db2fd11f5f3e87c7d70e8bd8f88 662 PANTHER PTHR23076:SF37 254 647 2.6E-50 T 14-09-2016 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PANTHER PTHR30381 4 373 9.5E-146 T 14-09-2016 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PANTHER PTHR30381:SF0 4 373 9.5E-146 T 14-09-2016 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 Pfam PF02119 Flagellar P-ring protein 30 371 3.8E-133 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 195 213 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 169 187 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 45 60 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 65 80 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 30 45 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 PRINTS PR01010 Flagellar P-ring protein signature 261 273 1.4E-92 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS03510 bfbfb41acdd0412a546400155a6f60d8 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 10 373 37.524 T 14-09-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AMK01_RS17980 cfbaa66207c4a0a2255478bf56125c8b 187 SUPERFAMILY SSF109854 9 149 2.49E-32 T 14-09-2016 AMK01_RS17980 cfbaa66207c4a0a2255478bf56125c8b 187 Pfam PF05163 DinB family 11 170 1.0E-33 T 14-09-2016 IPR007837 DNA damage-inducible protein DinB AMK01_RS17980 cfbaa66207c4a0a2255478bf56125c8b 187 Gene3D G3DSA:1.20.120.450 7 165 9.0E-35 T 14-09-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase AMK01_RS01390 06c65fc2e0de11978dee2f0f53dcc2cd 245 PANTHER PTHR11922:SF11 1 187 5.9E-43 T 14-09-2016 AMK01_RS01390 06c65fc2e0de11978dee2f0f53dcc2cd 245 Gene3D G3DSA:3.40.50.880 1 230 1.3E-47 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS01390 06c65fc2e0de11978dee2f0f53dcc2cd 245 Pfam PF00117 Glutamine amidotransferase class-I 65 182 2.3E-10 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS01390 06c65fc2e0de11978dee2f0f53dcc2cd 245 PANTHER PTHR11922 1 187 5.9E-43 T 14-09-2016 AMK01_RS01390 06c65fc2e0de11978dee2f0f53dcc2cd 245 SUPERFAMILY SSF52317 1 208 1.23E-42 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 PIRSF PIRSF000521 11 448 7.2E-20 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 Gene3D G3DSA:3.90.1150.10 9 68 9.8E-45 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 Gene3D G3DSA:3.90.1150.10 345 448 9.8E-45 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 Gene3D G3DSA:3.40.640.10 70 343 6.1E-77 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 Pfam PF00202 Aminotransferase class-III 33 443 7.8E-92 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 PANTHER PTHR11986 35 454 4.0E-148 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 SUPERFAMILY SSF53383 14 446 1.2E-116 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS06720 80a914f40b9055a555837fb6bc8ff499 455 PANTHER PTHR11986:SF81 35 454 4.0E-148 T 14-09-2016 AMK01_RS19550 e0d882dde8fd49d7b06152c2f16a4b31 219 PANTHER PTHR24220:SF470 3 215 8.8E-96 T 14-09-2016 AMK01_RS19550 e0d882dde8fd49d7b06152c2f16a4b31 219 Gene3D G3DSA:3.40.50.300 2 215 5.1E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19550 e0d882dde8fd49d7b06152c2f16a4b31 219 SUPERFAMILY SSF52540 1 215 2.27E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19550 e0d882dde8fd49d7b06152c2f16a4b31 219 PANTHER PTHR24220 3 215 8.8E-96 T 14-09-2016 AMK01_RS19550 e0d882dde8fd49d7b06152c2f16a4b31 219 SMART SM00382 27 214 6.9E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19550 e0d882dde8fd49d7b06152c2f16a4b31 219 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS19550 e0d882dde8fd49d7b06152c2f16a4b31 219 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 2.3E-84 T 14-09-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AMK01_RS19550 e0d882dde8fd49d7b06152c2f16a4b31 219 Pfam PF00005 ABC transporter 18 165 1.5E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20820 ac2cb9292ba1524f5afb3d8e6b9a546e 340 PANTHER PTHR30006 1 335 5.4E-97 T 14-09-2016 AMK01_RS20820 ac2cb9292ba1524f5afb3d8e6b9a546e 340 SUPERFAMILY SSF53850 35 328 3.36E-73 T 14-09-2016 AMK01_RS20820 ac2cb9292ba1524f5afb3d8e6b9a546e 340 PIRSF PIRSF002825 3 340 5.0E-79 T 14-09-2016 IPR026045 Ferric binding protein AMK01_RS20820 ac2cb9292ba1524f5afb3d8e6b9a546e 340 PANTHER PTHR30006:SF6 1 335 5.4E-97 T 14-09-2016 AMK01_RS20820 ac2cb9292ba1524f5afb3d8e6b9a546e 340 Gene3D G3DSA:3.40.190.10 273 323 2.3E-30 T 14-09-2016 AMK01_RS20820 ac2cb9292ba1524f5afb3d8e6b9a546e 340 Gene3D G3DSA:3.40.190.10 11 129 2.3E-30 T 14-09-2016 AMK01_RS20820 ac2cb9292ba1524f5afb3d8e6b9a546e 340 Gene3D G3DSA:3.40.190.10 134 272 4.2E-53 T 14-09-2016 AMK01_RS20820 ac2cb9292ba1524f5afb3d8e6b9a546e 340 Pfam PF13343 Bacterial extracellular solute-binding protein 83 308 9.5E-33 T 14-09-2016 AMK01_RS00170 63491337fbd948dd43f294f8719b9749 133 SUPERFAMILY SSF53062 1 129 1.44E-36 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK01_RS00170 63491337fbd948dd43f294f8719b9749 133 PANTHER PTHR33799 2 131 1.9E-37 T 14-09-2016 AMK01_RS00170 63491337fbd948dd43f294f8719b9749 133 Pfam PF03610 PTS system fructose IIA component 3 111 4.6E-29 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK01_RS00170 63491337fbd948dd43f294f8719b9749 133 Gene3D G3DSA:3.40.50.510 1 130 3.5E-40 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK01_RS13405 77e5b72dcf763846de6960111dadd4c6 432 SUPERFAMILY SSF111369 161 411 1.96E-18 T 14-09-2016 AMK01_RS13405 77e5b72dcf763846de6960111dadd4c6 432 Gene3D G3DSA:2.40.50.100 170 202 2.1E-12 T 14-09-2016 AMK01_RS13405 77e5b72dcf763846de6960111dadd4c6 432 Gene3D G3DSA:2.40.50.100 291 315 2.1E-12 T 14-09-2016 AMK01_RS13405 77e5b72dcf763846de6960111dadd4c6 432 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 168 404 3.4E-19 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS13405 77e5b72dcf763846de6960111dadd4c6 432 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 153 415 1.2E-33 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS13405 77e5b72dcf763846de6960111dadd4c6 432 PANTHER PTHR30469 98 414 6.8E-32 T 14-09-2016 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 PANTHER PTHR10357:SF11 453 518 3.5E-149 T 14-09-2016 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 PANTHER PTHR10357:SF11 10 420 3.5E-149 T 14-09-2016 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 Pfam PF00128 Alpha amylase, catalytic domain 38 389 1.0E-87 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 Gene3D G3DSA:3.90.400.10 115 185 3.8E-30 T 14-09-2016 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 SMART SM00642 23 415 1.3E-128 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 Gene3D G3DSA:2.60.40.1180 478 548 2.4E-10 T 14-09-2016 IPR013780 Glycosyl hydrolase, all-beta AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 SUPERFAMILY SSF51445 13 474 7.37E-131 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 Gene3D G3DSA:3.20.20.80 186 477 1.2E-100 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 Gene3D G3DSA:3.20.20.80 13 114 1.2E-100 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 SUPERFAMILY SSF51011 477 549 3.65E-10 T 14-09-2016 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 PANTHER PTHR10357 453 518 3.5E-149 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS03700 6f99143b0ee89848f84788ef7169eea1 550 PANTHER PTHR10357 10 420 3.5E-149 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 Pfam PF01545 Cation efflux family 19 207 1.4E-42 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 Gene3D G3DSA:3.30.70.1350 208 290 1.6E-27 T 14-09-2016 IPR027470 Cation efflux protein, cytoplasmic domain AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 Gene3D G3DSA:1.20.1510.10 13 207 1.9E-46 T 14-09-2016 IPR027469 Cation efflux protein transmembrane domain AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 SUPERFAMILY SSF160240 210 289 3.14E-23 T 14-09-2016 AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 290 1.7E-70 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 SUPERFAMILY SSF161111 10 208 1.83E-53 T 14-09-2016 AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 289 4.0E-24 T 14-09-2016 IPR027470 Cation efflux protein, cytoplasmic domain AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 PANTHER PTHR11562:SF55 9 298 4.7E-93 T 14-09-2016 AMK01_RS15645 8c4e6e0554b9149420116a25b3084b65 304 PANTHER PTHR11562 9 298 4.7E-93 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 Pfam PF00535 Glycosyl transferase family 2 131 318 2.5E-41 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 Pfam PF03552 Cellulose synthase 326 453 6.7E-7 T 14-09-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 SUPERFAMILY SSF53448 114 424 1.22E-46 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 PANTHER PTHR10587 35 576 7.1E-72 T 14-09-2016 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 3 708 8.2E-281 T 14-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 Gene3D G3DSA:3.90.550.10 128 386 4.9E-27 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 PRINTS PR01439 Cellulose synthase subunit A signature 467 486 4.7E-15 T 14-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 PRINTS PR01439 Cellulose synthase subunit A signature 54 74 4.7E-15 T 14-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 PRINTS PR01439 Cellulose synthase subunit A signature 137 156 4.7E-15 T 14-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 PRINTS PR01439 Cellulose synthase subunit A signature 539 560 4.7E-15 T 14-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 PRINTS PR01439 Cellulose synthase subunit A signature 398 424 4.7E-15 T 14-09-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 PANTHER PTHR10587:SF94 35 576 7.1E-72 T 14-09-2016 AMK01_RS07790 a9090293d7b6259d4d9debf2ab0b647f 730 Pfam PF07238 PilZ domain 567 669 1.6E-8 T 14-09-2016 IPR009875 PilZ domain GO:0035438 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 Gene3D G3DSA:3.30.1140.32 108 207 8.8E-47 T 14-09-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 SMART SM00322 60 125 1.2E-8 T 14-09-2016 IPR004087 K Homology domain GO:0003676 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 SUPERFAMILY SSF54814 2 106 2.43E-39 T 14-09-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 PANTHER PTHR11760:SF19 2 244 1.9E-135 T 14-09-2016 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.7E-97 T 14-09-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-09-2016 IPR018280 Ribosomal protein S3, conserved site AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 Gene3D G3DSA:3.30.300.20 17 107 2.0E-33 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 PANTHER PTHR11760 2 244 1.9E-135 T 14-09-2016 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.896 T 14-09-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 Pfam PF07650 KH domain 38 110 6.2E-20 T 14-09-2016 IPR004044 K Homology domain, type 2 GO:0003723 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 SUPERFAMILY SSF54821 108 206 4.32E-40 T 14-09-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK01_RS08480 57a2ab83269d43b498bd098b16125345 244 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.9E-40 T 14-09-2016 AMK01_RS07300 df33b9ddc82d71fd3e85c4a91f0a8969 249 Pfam PF01183 Glycosyl hydrolases family 25 45 223 1.5E-40 T 14-09-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AMK01_RS07300 df33b9ddc82d71fd3e85c4a91f0a8969 249 SMART SM00641 42 149 6.8E-12 T 14-09-2016 IPR018077 Glycoside hydrolase, family 25 subgroup AMK01_RS07300 df33b9ddc82d71fd3e85c4a91f0a8969 249 SUPERFAMILY SSF51445 39 240 9.83E-56 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS07300 df33b9ddc82d71fd3e85c4a91f0a8969 249 Gene3D G3DSA:3.20.20.80 40 233 5.7E-58 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS07300 df33b9ddc82d71fd3e85c4a91f0a8969 249 PANTHER PTHR34135:SF2 12 232 4.6E-57 T 14-09-2016 AMK01_RS07300 df33b9ddc82d71fd3e85c4a91f0a8969 249 PANTHER PTHR34135 12 232 4.6E-57 T 14-09-2016 AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 34.292 T 14-09-2016 IPR002876 Transcriptional regulator TACO1-like AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 Pfam PF01709 Transcriptional regulator 5 236 3.0E-93 T 14-09-2016 IPR002876 Transcriptional regulator TACO1-like AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 SUPERFAMILY SSF75625 3 245 2.62E-93 T 14-09-2016 IPR029072 YebC-like AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 Gene3D G3DSA:3.30.70.980 136 204 2.7E-22 T 14-09-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 PANTHER PTHR12532 1 240 5.3E-107 T 14-09-2016 IPR002876 Transcriptional regulator TACO1-like AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 4.3E-94 T 14-09-2016 IPR002876 Transcriptional regulator TACO1-like AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 Gene3D G3DSA:1.10.10.200 1 80 1.4E-35 T 14-09-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 Gene3D G3DSA:3.30.1270.10 81 135 1.3E-41 T 14-09-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMK01_RS17930 c4b320e0461d61d18a51066c872a1504 248 Gene3D G3DSA:3.30.1270.10 211 246 1.3E-41 T 14-09-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMK01_RS19950 9ab77e024e1749e09a7d6ee33ef86aab 358 PANTHER PTHR40590 59 358 1.5E-21 T 14-09-2016 AMK01_RS19950 9ab77e024e1749e09a7d6ee33ef86aab 358 Pfam PF01963 TraB family 85 355 2.3E-69 T 14-09-2016 IPR002816 Pheromone shutdown, TraB AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 Pfam PF01926 50S ribosome-binding GTPase 205 327 9.7E-19 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 PANTHER PTHR10229:SF0 5 420 2.8E-166 T 14-09-2016 AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 PANTHER PTHR10229 5 420 2.8E-166 T 14-09-2016 IPR016496 GTPase HflX GO:0005525 AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 PIRSF PIRSF006809 2 431 5.4E-146 T 14-09-2016 IPR016496 GTPase HflX GO:0005525 AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 Hamap MF_00900 GTPase HflX [hflX]. 31 400 46.027 T 14-09-2016 IPR016496 GTPase HflX GO:0005525 AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 Gene3D G3DSA:3.40.50.300 205 371 4.7E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 Pfam PF13167 GTP-binding GTPase N-terminal 29 115 2.0E-27 T 14-09-2016 IPR025121 GTPase HflX, N-terminal AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 205 225 6.0E-7 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 290 6.0E-7 T 14-09-2016 IPR006073 GTP binding domain GO:0005525 AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 24 370 5.5E-136 T 14-09-2016 IPR016496 GTPase HflX GO:0005525 AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 Pfam PF16360 GTP-binding GTPase Middle Region 118 197 2.5E-28 T 14-09-2016 IPR032305 GTP-binding protein, middle domain AMK01_RS10020 11db5a2fc0f69ed0214062d322bb4836 441 SUPERFAMILY SSF52540 203 378 3.88E-41 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 SUPERFAMILY SSF81301 181 397 3.11E-56 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 SUPERFAMILY SSF55021 669 741 1.21E-9 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 Gene3D G3DSA:3.30.70.260 667 739 1.5E-8 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 SMART SM00471 41 153 8.4E-7 T 14-09-2016 IPR003607 HD/PDEase domain AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 Pfam PF02824 TGS domain 394 451 8.2E-19 T 14-09-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 Gene3D G3DSA:3.30.460.10 192 326 1.4E-44 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 739 8.6E-194 T 14-09-2016 IPR004811 RelA/SpoT family GO:0015969 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 PANTHER PTHR21262:SF0 1 559 1.9E-287 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 PANTHER PTHR21262 577 744 1.9E-287 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 PANTHER PTHR21262:SF0 577 744 1.9E-287 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 Pfam PF13328 HD domain 26 175 4.8E-48 T 14-09-2016 IPR003607 HD/PDEase domain AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 PANTHER PTHR21262 1 559 1.9E-287 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 SMART SM00954 236 346 1.8E-57 T 14-09-2016 IPR007685 RelA/SpoT GO:0015969 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 SUPERFAMILY SSF109604 5 190 7.22E-69 T 14-09-2016 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 SUPERFAMILY SSF81271 380 452 8.94E-20 T 14-09-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 Pfam PF13291 ACT domain 664 741 7.1E-16 T 14-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 Gene3D G3DSA:3.10.20.30 392 452 5.1E-20 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS07070 61cd0946793825d8e7f199eee703d507 744 Pfam PF04607 Region found in RelA / SpoT proteins 236 345 1.5E-34 T 14-09-2016 IPR007685 RelA/SpoT GO:0015969 AMK01_RS02115 1ef199b420dbf18e05a4712ba2e935a5 135 Gene3D G3DSA:3.10.180.10 7 130 1.3E-20 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS02115 1ef199b420dbf18e05a4712ba2e935a5 135 PANTHER PTHR36437:SF2 1 131 3.5E-43 T 14-09-2016 AMK01_RS02115 1ef199b420dbf18e05a4712ba2e935a5 135 SUPERFAMILY SSF54593 4 130 3.36E-25 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS02115 1ef199b420dbf18e05a4712ba2e935a5 135 PANTHER PTHR36437 1 131 3.5E-43 T 14-09-2016 AMK01_RS02115 1ef199b420dbf18e05a4712ba2e935a5 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 125 3.6E-13 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 SUPERFAMILY SSF53822 24 369 3.21E-94 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 328 343 1.7E-30 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 1.7E-30 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 276 289 1.7E-30 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 1.7E-30 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 66 84 1.7E-30 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 87 97 1.7E-30 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 253 271 1.7E-30 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PANTHER PTHR30483:SF20 1 361 4.1E-113 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 Pfam PF13458 Periplasmic binding protein 25 361 1.0E-63 T 14-09-2016 IPR028081 Leucine-binding protein domain AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 Gene3D G3DSA:3.40.50.2300 24 223 2.2E-65 T 14-09-2016 AMK01_RS17070 18d0d67d8f59ae261bb7632d4ca23876 373 PANTHER PTHR30483 1 361 4.1E-113 T 14-09-2016 AMK01_RS11560 8f6281245f4635f647066383a1634d1a 370 PANTHER PTHR30605 1 367 1.6E-95 T 14-09-2016 AMK01_RS11560 8f6281245f4635f647066383a1634d1a 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 370 34.832 T 14-09-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 AMK01_RS11560 8f6281245f4635f647066383a1634d1a 370 SUPERFAMILY SSF53067 74 119 2.2E-16 T 14-09-2016 AMK01_RS11560 8f6281245f4635f647066383a1634d1a 370 SUPERFAMILY SSF53067 8 38 2.2E-16 T 14-09-2016 AMK01_RS11560 8f6281245f4635f647066383a1634d1a 370 SUPERFAMILY SSF53067 149 342 2.2E-16 T 14-09-2016 AMK01_RS11560 8f6281245f4635f647066383a1634d1a 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 7 366 1.0E-78 T 14-09-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 AMK01_RS11560 8f6281245f4635f647066383a1634d1a 370 Gene3D G3DSA:3.30.420.40 6 205 9.1E-62 T 14-09-2016 AMK01_RS12655 9afeb4b405f585e46bedbe416e905c08 342 SMART SM00829 5 339 9.6E-25 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS12655 9afeb4b405f585e46bedbe416e905c08 342 PANTHER PTHR11695 12 342 1.3E-108 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS12655 9afeb4b405f585e46bedbe416e905c08 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 133 2.4E-24 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS12655 9afeb4b405f585e46bedbe416e905c08 342 SUPERFAMILY SSF50129 1 170 3.3E-41 T 14-09-2016 IPR011032 GroES-like AMK01_RS12655 9afeb4b405f585e46bedbe416e905c08 342 Gene3D G3DSA:3.40.50.720 172 288 8.3E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12655 9afeb4b405f585e46bedbe416e905c08 342 SUPERFAMILY SSF51735 143 313 1.55E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12655 9afeb4b405f585e46bedbe416e905c08 342 Gene3D G3DSA:3.90.180.10 1 171 5.5E-35 T 14-09-2016 IPR011032 GroES-like AMK01_RS12655 9afeb4b405f585e46bedbe416e905c08 342 Pfam PF00107 Zinc-binding dehydrogenase 177 303 6.8E-40 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS19760 e3062be58b47deb3e77c4043eed6204f 305 SUPERFAMILY SSF161098 64 292 1.57E-51 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19760 e3062be58b47deb3e77c4043eed6204f 305 PANTHER PTHR30193 12 303 6.7E-86 T 14-09-2016 AMK01_RS19760 e3062be58b47deb3e77c4043eed6204f 305 Gene3D G3DSA:1.10.3720.10 13 294 2.7E-53 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19760 e3062be58b47deb3e77c4043eed6204f 305 PANTHER PTHR30193:SF6 12 303 6.7E-86 T 14-09-2016 AMK01_RS19760 e3062be58b47deb3e77c4043eed6204f 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 297 1.1E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.6E-17 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 Gene3D G3DSA:1.10.10.10 3 79 9.4E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 SUPERFAMILY SSF46785 4 86 1.14E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 SUPERFAMILY SSF53850 90 294 2.41E-42 T 14-09-2016 AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 PANTHER PTHR30537:SF5 1 298 5.7E-115 T 14-09-2016 AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 PANTHER PTHR30537 1 298 5.7E-115 T 14-09-2016 AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 Gene3D G3DSA:3.40.190.10 80 174 2.8E-9 T 14-09-2016 AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 Pfam PF03466 LysR substrate binding domain 89 291 2.2E-38 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS06140 3c4471cafb7c44bf70bb2e32c182e7bd 299 Gene3D G3DSA:3.40.190.10 175 259 4.2E-19 T 14-09-2016 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 3.8E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 3.8E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 Gene3D G3DSA:1.10.10.60 55 78 2.3E-7 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 PANTHER PTHR30055:SF53 6 174 3.2E-47 T 14-09-2016 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 Gene3D G3DSA:1.10.10.60 11 54 2.9E-19 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 Gene3D G3DSA:1.10.357.10 79 211 1.3E-58 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 SUPERFAMILY SSF48498 87 211 3.74E-43 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 Pfam PF08362 YcdC-like protein, C-terminal region 71 211 2.7E-59 T 14-09-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 1.5E-13 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 SUPERFAMILY SSF46689 10 90 6.8E-20 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16910 89f1b7caf8a06406c20a192ee463278b 214 PANTHER PTHR30055 6 174 3.2E-47 T 14-09-2016 AMK01_RS00625 0dcf9db6a0f4aecc9cd6a056e132cc8c 73 SUPERFAMILY SSF46955 15 69 9.89E-6 T 14-09-2016 IPR009061 Putative DNA-binding domain AMK01_RS00625 0dcf9db6a0f4aecc9cd6a056e132cc8c 73 Gene3D G3DSA:1.10.10.10 14 64 1.2E-5 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 PANTHER PTHR11941:SF53 2 187 1.2E-107 T 14-09-2016 AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 PANTHER PTHR11941:SF53 246 324 1.2E-107 T 14-09-2016 AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 Gene3D G3DSA:3.90.226.10 255 325 2.1E-51 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 Gene3D G3DSA:3.90.226.10 2 198 2.1E-51 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 PANTHER PTHR11941 2 187 1.2E-107 T 14-09-2016 AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 PANTHER PTHR11941 246 324 1.2E-107 T 14-09-2016 AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 Pfam PF16113 Enoyl-CoA hydratase/isomerase 15 341 1.1E-118 T 14-09-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 SUPERFAMILY SSF52096 250 328 2.24E-59 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS03025 d56129d95daa6a609262c86b57fa5800 350 SUPERFAMILY SSF52096 1 187 2.24E-59 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS20585 714710f3ce9db9c395f1e044b8827421 416 SUPERFAMILY SSF56014 301 389 1.44E-5 T 14-09-2016 AMK01_RS20585 714710f3ce9db9c395f1e044b8827421 416 Pfam PF04551 GcpE protein 17 388 6.0E-108 T 14-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AMK01_RS20585 714710f3ce9db9c395f1e044b8827421 416 PIRSF PIRSF004640 5 412 6.7E-127 T 14-09-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AMK01_RS20585 714710f3ce9db9c395f1e044b8827421 416 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 10 404 29.606 T 14-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AMK01_RS20585 714710f3ce9db9c395f1e044b8827421 416 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 12 401 4.0E-131 T 14-09-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 AMK01_RS20585 714710f3ce9db9c395f1e044b8827421 416 PANTHER PTHR30454 12 412 1.2E-141 T 14-09-2016 AMK01_RS20110 4e9b5f05ebf35c48f985eaaa624c7bcb 410 PANTHER PTHR23513 1 402 5.3E-106 T 14-09-2016 AMK01_RS20110 4e9b5f05ebf35c48f985eaaa624c7bcb 410 PANTHER PTHR23513:SF9 1 402 5.3E-106 T 14-09-2016 AMK01_RS20110 4e9b5f05ebf35c48f985eaaa624c7bcb 410 Pfam PF05977 Transmembrane secretion effector 10 403 1.3E-30 T 14-09-2016 IPR010290 Transmembrane secretion effector AMK01_RS20110 4e9b5f05ebf35c48f985eaaa624c7bcb 410 SUPERFAMILY SSF103473 18 402 7.59E-38 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS20110 4e9b5f05ebf35c48f985eaaa624c7bcb 410 Gene3D G3DSA:1.20.1250.20 16 202 1.9E-23 T 14-09-2016 AMK01_RS20110 4e9b5f05ebf35c48f985eaaa624c7bcb 410 Gene3D G3DSA:1.20.1250.20 223 394 8.2E-9 T 14-09-2016 AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 Pfam PF13406 Transglycosylase SLT domain 35 329 9.5E-100 T 14-09-2016 IPR031304 Transglycosylase SLT domain 2 AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 Gene3D G3DSA:1.10.530.10 222 334 7.7E-54 T 14-09-2016 AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 Gene3D G3DSA:1.10.530.10 79 136 7.7E-54 T 14-09-2016 AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 PANTHER PTHR30163:SF2 15 406 5.5E-122 T 14-09-2016 AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 SUPERFAMILY SSF53955 24 335 6.75E-90 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 PANTHER PTHR30163 15 406 5.5E-122 T 14-09-2016 IPR011757 Lytic transglycosylase MltB AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 35 333 2.4E-108 T 14-09-2016 IPR011970 Lytic murein transglycosylase AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 Pfam PF01471 Putative peptidoglycan binding domain 355 404 5.7E-10 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 Gene3D G3DSA:1.10.101.10 355 406 3.1E-10 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS18375 0e117cdb43da78c572201e45922662f8 407 SUPERFAMILY SSF47090 351 406 1.81E-12 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS07685 e33e307fc17a7aa0960625e17d6c259f 432 PANTHER PTHR11680 4 431 1.7E-260 T 14-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK01_RS07685 e33e307fc17a7aa0960625e17d6c259f 432 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 228 244 - T 14-09-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK01_RS07685 e33e307fc17a7aa0960625e17d6c259f 432 Pfam PF00464 Serine hydroxymethyltransferase 14 391 3.0E-180 T 14-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK01_RS07685 e33e307fc17a7aa0960625e17d6c259f 432 Gene3D G3DSA:3.90.1150.10 290 430 1.6E-56 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS07685 e33e307fc17a7aa0960625e17d6c259f 432 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 13 429 53.074 T 14-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK01_RS07685 e33e307fc17a7aa0960625e17d6c259f 432 SUPERFAMILY SSF53383 6 430 9.65E-185 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS07685 e33e307fc17a7aa0960625e17d6c259f 432 Gene3D G3DSA:3.40.640.10 43 289 1.4E-108 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS07685 e33e307fc17a7aa0960625e17d6c259f 432 PIRSF PIRSF000412 2 432 8.5E-170 T 14-09-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK01_RS08810 cc531832f6ab5fbfa3ae197e95f14d18 453 Pfam PF04209 homogentisate 1,2-dioxygenase 20 446 9.7E-215 T 14-09-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 AMK01_RS08810 cc531832f6ab5fbfa3ae197e95f14d18 453 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 20 448 70.108 T 14-09-2016 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 AMK01_RS08810 cc531832f6ab5fbfa3ae197e95f14d18 453 PANTHER PTHR11056 7 452 5.1E-238 T 14-09-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 AMK01_RS08810 cc531832f6ab5fbfa3ae197e95f14d18 453 Gene3D G3DSA:2.60.120.10 213 238 3.9E-71 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS08810 cc531832f6ab5fbfa3ae197e95f14d18 453 Gene3D G3DSA:2.60.120.10 299 416 3.9E-71 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS08810 cc531832f6ab5fbfa3ae197e95f14d18 453 SUPERFAMILY SSF51182 19 448 2.76E-165 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS08810 cc531832f6ab5fbfa3ae197e95f14d18 453 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 19 446 1.2E-216 T 14-09-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 AMK01_RS06910 327edb4029e63d24a174133f4eea9371 316 PANTHER PTHR22916 1 302 6.0E-46 T 14-09-2016 AMK01_RS06910 327edb4029e63d24a174133f4eea9371 316 Gene3D G3DSA:3.90.550.10 4 234 1.1E-47 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS06910 327edb4029e63d24a174133f4eea9371 316 Pfam PF00535 Glycosyl transferase family 2 7 165 2.7E-31 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS06910 327edb4029e63d24a174133f4eea9371 316 SUPERFAMILY SSF53448 4 218 3.05E-51 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS20605 4ba476cf09ebf5e2682d1fb4373d85c5 240 SUPERFAMILY SSF55144 7 236 1.2E-64 T 14-09-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK01_RS20605 4ba476cf09ebf5e2682d1fb4373d85c5 240 Pfam PF08975 Domain of unknown function (DUF1868) 28 141 1.7E-39 T 14-09-2016 IPR015069 Domain of unknown function DUF1868 AMK01_RS20605 4ba476cf09ebf5e2682d1fb4373d85c5 240 Gene3D G3DSA:3.90.1140.10 3 237 3.4E-89 T 14-09-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 Gene3D G3DSA:1.10.10.10 18 155 5.2E-35 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 SMART SM00347 46 156 2.1E-15 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 SUPERFAMILY SSF46785 19 124 1.65E-29 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 Pfam PF01047 MarR family 53 111 1.3E-13 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 PANTHER PTHR33164:SF5 19 124 5.0E-48 T 14-09-2016 AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 1.4E-5 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 1.4E-5 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 1.4E-5 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13025 08405347a4b49a46dd658c4da7eb85c9 165 PANTHER PTHR33164 19 124 5.0E-48 T 14-09-2016 AMK01_RS01160 a04195b45e61ff8dea5b363b32d4ae25 136 Pfam PF13629 Pilus formation protein N terminal region 29 97 4.4E-21 T 14-09-2016 IPR032789 Pilus formation protein, N-terminal AMK01_RS01320 6c41e7be9c27dccbd3e6612c0c01a8ac 354 Pfam PF01370 NAD dependent epimerase/dehydratase family 12 231 2.2E-32 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS01320 6c41e7be9c27dccbd3e6612c0c01a8ac 354 Gene3D G3DSA:3.40.50.720 11 203 4.8E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01320 6c41e7be9c27dccbd3e6612c0c01a8ac 354 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 6 349 1.1E-130 T 14-09-2016 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833|UniPathway: UPA00055|UniPathway: UPA00281 AMK01_RS01320 6c41e7be9c27dccbd3e6612c0c01a8ac 354 Gene3D G3DSA:3.90.25.10 204 351 3.3E-37 T 14-09-2016 AMK01_RS01320 6c41e7be9c27dccbd3e6612c0c01a8ac 354 PANTHER PTHR10366:SF33 11 351 3.5E-121 T 14-09-2016 AMK01_RS01320 6c41e7be9c27dccbd3e6612c0c01a8ac 354 PANTHER PTHR10366 11 351 3.5E-121 T 14-09-2016 AMK01_RS01320 6c41e7be9c27dccbd3e6612c0c01a8ac 354 SUPERFAMILY SSF51735 6 338 7.24E-64 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04270 2c068f7dc9a15ca34d0a92f09d4a4003 186 SUPERFAMILY SSF53335 1 182 6.31E-41 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04270 2c068f7dc9a15ca34d0a92f09d4a4003 186 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK01_RS04270 2c068f7dc9a15ca34d0a92f09d4a4003 186 PANTHER PTHR18895:SF60 1 184 2.8E-34 T 14-09-2016 AMK01_RS04270 2c068f7dc9a15ca34d0a92f09d4a4003 186 Pfam PF03602 Conserved hypothetical protein 95 1 181 1.9E-47 T 14-09-2016 AMK01_RS04270 2c068f7dc9a15ca34d0a92f09d4a4003 186 Gene3D G3DSA:3.40.50.150 1 184 5.4E-51 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04270 2c068f7dc9a15ca34d0a92f09d4a4003 186 PANTHER PTHR18895 1 184 2.8E-34 T 14-09-2016 AMK01_RS04270 2c068f7dc9a15ca34d0a92f09d4a4003 186 PIRSF PIRSF004553 1 185 1.1E-47 T 14-09-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS04270 2c068f7dc9a15ca34d0a92f09d4a4003 186 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 182 2.5E-37 T 14-09-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS13590 16cb68aa67d296675aba1f0f9235f496 390 Pfam PF08241 Methyltransferase domain 163 260 1.2E-17 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK01_RS13590 16cb68aa67d296675aba1f0f9235f496 390 SUPERFAMILY SSF53335 131 384 6.69E-33 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS13590 16cb68aa67d296675aba1f0f9235f496 390 PANTHER PTHR10108 143 261 5.3E-25 T 14-09-2016 AMK01_RS13590 16cb68aa67d296675aba1f0f9235f496 390 Gene3D G3DSA:3.40.50.150 138 338 1.5E-33 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14620 2682b16979dfc6fc6936911894dd75b2 384 PANTHER PTHR30474:SF2 1 381 1.3E-110 T 14-09-2016 AMK01_RS14620 2682b16979dfc6fc6936911894dd75b2 384 PANTHER PTHR30474 1 381 1.3E-110 T 14-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMK01_RS14620 2682b16979dfc6fc6936911894dd75b2 384 Pfam PF01098 Cell cycle protein 21 364 1.3E-77 T 14-09-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMK01_RS14620 2682b16979dfc6fc6936911894dd75b2 384 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 18 363 1.1E-103 T 14-09-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 136 160 5.4E-11 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 98 106 5.4E-11 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 5.4E-11 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 256 274 5.4E-11 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 Gene3D G3DSA:3.50.50.60 102 299 2.2E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 Pfam PF14759 Reductase C-terminal 309 395 9.3E-20 T 14-09-2016 IPR028202 Reductase, C-terminal AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 Gene3D G3DSA:3.30.390.30 309 397 6.2E-21 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 SUPERFAMILY SSF55424 303 397 6.73E-19 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 Gene3D G3DSA:3.50.50.60 4 101 3.0E-28 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 290 6.2E-63 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 SUPERFAMILY SSF51905 187 324 1.08E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 SUPERFAMILY SSF51905 4 157 1.08E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 2.3E-27 T 14-09-2016 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 2.3E-27 T 14-09-2016 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 221 237 2.3E-27 T 14-09-2016 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 268 2.3E-27 T 14-09-2016 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.3E-27 T 14-09-2016 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PANTHER PTHR22912:SF180 4 324 3.9E-97 T 14-09-2016 AMK01_RS13570 c122cfb7bb2ce765724a8af6c6e6853c 401 PANTHER PTHR22912 4 324 3.9E-97 T 14-09-2016 AMK01_RS16245 2aa7af40b67e5aa3f22c15d5b0eb98df 199 Pfam PF12766 Pyridoxamine 5'-phosphate oxidase 27 104 5.3E-12 T 14-09-2016 IPR024624 Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181 AMK01_RS16245 2aa7af40b67e5aa3f22c15d5b0eb98df 199 PANTHER PTHR10851 29 199 8.7E-18 T 14-09-2016 AMK01_RS16245 2aa7af40b67e5aa3f22c15d5b0eb98df 199 PANTHER PTHR10851:SF3 29 199 8.7E-18 T 14-09-2016 AMK01_RS16245 2aa7af40b67e5aa3f22c15d5b0eb98df 199 Gene3D G3DSA:2.30.110.10 16 199 1.5E-35 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS16245 2aa7af40b67e5aa3f22c15d5b0eb98df 199 SUPERFAMILY SSF50475 23 199 6.92E-27 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 SUPERFAMILY SSF52304 4 144 1.31E-59 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 PIRSF PIRSF001399 1 145 9.3E-62 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 69.209 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 Pfam PF01220 Dehydroquinase class II 4 139 2.7E-58 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 140 2.0E-73 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 141 1.4E-56 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-09-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 PANTHER PTHR21272 1 149 2.9E-86 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS11725 47cc111fe49d5dbca0ca44b50240baa5 149 Gene3D G3DSA:3.40.50.9100 4 144 4.4E-64 T 14-09-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK01_RS20440 ed72987070489585c42707d0266a8d63 169 Pfam PF04073 Aminoacyl-tRNA editing domain 28 154 7.2E-25 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK01_RS20440 ed72987070489585c42707d0266a8d63 169 SUPERFAMILY SSF55826 8 167 6.8E-47 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK01_RS20440 ed72987070489585c42707d0266a8d63 169 PANTHER PTHR31423 2 165 8.6E-52 T 14-09-2016 AMK01_RS20440 ed72987070489585c42707d0266a8d63 169 Gene3D G3DSA:3.90.960.10 3 167 1.3E-61 T 14-09-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK01_RS07045 26d0de2b1bbcc12d2422aaa809c0a27c 691 PANTHER PTHR21666 507 686 2.4E-34 T 14-09-2016 AMK01_RS07045 26d0de2b1bbcc12d2422aaa809c0a27c 691 Gene3D G3DSA:1.10.530.10 536 679 3.8E-39 T 14-09-2016 AMK01_RS07045 26d0de2b1bbcc12d2422aaa809c0a27c 691 Pfam PF01464 Transglycosylase SLT domain 529 635 6.1E-22 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AMK01_RS07045 26d0de2b1bbcc12d2422aaa809c0a27c 691 SUPERFAMILY SSF48435 69 508 3.79E-64 T 14-09-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AMK01_RS07045 26d0de2b1bbcc12d2422aaa809c0a27c 691 Gene3D G3DSA:1.25.20.10 72 429 4.2E-25 T 14-09-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMK01_RS07045 26d0de2b1bbcc12d2422aaa809c0a27c 691 SUPERFAMILY SSF53955 532 680 9.15E-39 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS07045 26d0de2b1bbcc12d2422aaa809c0a27c 691 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 542 570 - T 14-09-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AMK01_RS07370 03e269f4133999ab753e0e6877651c2a 152 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 4.0E-27 T 14-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS07370 03e269f4133999ab753e0e6877651c2a 152 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 21.263 T 14-09-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS07370 03e269f4133999ab753e0e6877651c2a 152 SUPERFAMILY SSF54995 1 104 6.41E-35 T 14-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS07370 03e269f4133999ab753e0e6877651c2a 152 Pfam PF01250 Ribosomal protein S6 4 91 2.3E-30 T 14-09-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS07370 03e269f4133999ab753e0e6877651c2a 152 Gene3D G3DSA:3.30.70.60 1 104 2.2E-38 T 14-09-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMK01_RS07370 03e269f4133999ab753e0e6877651c2a 152 PANTHER PTHR21011 1 126 3.2E-29 T 14-09-2016 AMK01_RS03865 4399f19b94850ccdbb090ce1578e8026 296 PANTHER PTHR30465 5 295 2.1E-133 T 14-09-2016 AMK01_RS03865 4399f19b94850ccdbb090ce1578e8026 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 12 56 3.6E-14 T 14-09-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMK01_RS03865 4399f19b94850ccdbb090ce1578e8026 296 SUPERFAMILY SSF161098 88 275 1.05E-30 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03865 4399f19b94850ccdbb090ce1578e8026 296 Gene3D G3DSA:1.10.3720.10 85 291 1.6E-30 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03865 4399f19b94850ccdbb090ce1578e8026 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 294 2.4E-33 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03865 4399f19b94850ccdbb090ce1578e8026 296 PANTHER PTHR30465:SF10 5 295 2.1E-133 T 14-09-2016 AMK01_RS16100 a856cb5960b6a71ba8fc9b62834b017b 477 SUPERFAMILY SSF53720 2 473 1.7E-156 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS16100 a856cb5960b6a71ba8fc9b62834b017b 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 14-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS16100 a856cb5960b6a71ba8fc9b62834b017b 477 Gene3D G3DSA:3.40.605.10 4 259 4.4E-88 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS16100 a856cb5960b6a71ba8fc9b62834b017b 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 14-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS16100 a856cb5960b6a71ba8fc9b62834b017b 477 Gene3D G3DSA:3.40.309.10 260 447 1.7E-66 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS16100 a856cb5960b6a71ba8fc9b62834b017b 477 PANTHER PTHR11699:SF200 1 474 2.7E-242 T 14-09-2016 AMK01_RS16100 a856cb5960b6a71ba8fc9b62834b017b 477 PANTHER PTHR11699 1 474 2.7E-242 T 14-09-2016 AMK01_RS16100 a856cb5960b6a71ba8fc9b62834b017b 477 Pfam PF00171 Aldehyde dehydrogenase family 15 472 4.2E-161 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS12495 38a25561dd85bf4070169960493fc76e 260 PANTHER PTHR34148:SF1 1 257 1.6E-45 T 14-09-2016 AMK01_RS12495 38a25561dd85bf4070169960493fc76e 260 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 13 256 1.9E-32 T 14-09-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS12495 38a25561dd85bf4070169960493fc76e 260 Pfam PF02654 Cobalamin-5-phosphate synthase 13 254 4.5E-50 T 14-09-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS12495 38a25561dd85bf4070169960493fc76e 260 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 260 45.16 T 14-09-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS12495 38a25561dd85bf4070169960493fc76e 260 PANTHER PTHR34148 1 257 1.6E-45 T 14-09-2016 AMK01_RS05720 bb79e8ecde79bc9f598fc6e3e3026801 221 SUPERFAMILY SSF51161 2 205 4.57E-34 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS05720 bb79e8ecde79bc9f598fc6e3e3026801 221 Gene3D G3DSA:3.40.50.20 1 93 5.7E-4 T 14-09-2016 IPR016185 Pre-ATP-grasp domain AMK01_RS05720 bb79e8ecde79bc9f598fc6e3e3026801 221 Gene3D G3DSA:2.160.10.10 96 205 1.3E-23 T 14-09-2016 AMK01_RS05720 bb79e8ecde79bc9f598fc6e3e3026801 221 PANTHER PTHR23416 109 204 1.9E-14 T 14-09-2016 AMK01_RS05720 bb79e8ecde79bc9f598fc6e3e3026801 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 1.4E-6 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS05720 bb79e8ecde79bc9f598fc6e3e3026801 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 160 192 1.6E-7 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS05720 bb79e8ecde79bc9f598fc6e3e3026801 221 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 4 205 3.1E-54 T 14-09-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like AMK01_RS13535 cdcab9ee5237f3d14011c2523206e4dc 147 Gene3D G3DSA:3.30.530.20 4 143 5.7E-42 T 14-09-2016 IPR023393 START-like domain AMK01_RS13535 cdcab9ee5237f3d14011c2523206e4dc 147 SUPERFAMILY SSF55961 4 143 3.96E-43 T 14-09-2016 AMK01_RS13535 cdcab9ee5237f3d14011c2523206e4dc 147 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 142 6.0E-28 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS13535 cdcab9ee5237f3d14011c2523206e4dc 147 PANTHER PTHR13009 4 145 6.2E-25 T 14-09-2016 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 Pfam PF03472 Autoinducer binding domain 19 169 1.8E-28 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 SMART SM00421 187 244 1.5E-18 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 Gene3D G3DSA:3.30.450.80 6 191 3.3E-35 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 PANTHER PTHR26402:SF151 155 250 8.3E-13 T 14-09-2016 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 Gene3D G3DSA:1.10.10.10 192 250 5.0E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 PANTHER PTHR26402 155 250 8.3E-13 T 14-09-2016 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 189 244 3.1E-17 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 SUPERFAMILY SSF46894 181 250 8.16E-19 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 204 1.1E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 220 1.1E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 220 232 1.1E-9 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS20545 94040c0faa7406c442155a70305d3020 251 SUPERFAMILY SSF75516 8 174 3.92E-33 T 14-09-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMK01_RS06545 fd4dc75f488c148d772549e022425946 214 Gene3D G3DSA:3.30.20.10 99 142 4.9E-11 T 14-09-2016 AMK01_RS06545 fd4dc75f488c148d772549e022425946 214 Pfam PF00182 Chitinase class I 102 141 1.8E-4 T 14-09-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 AMK01_RS06545 fd4dc75f488c148d772549e022425946 214 SUPERFAMILY SSF53955 33 200 6.47E-21 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS13425 dcd2ae7af30224664ff4c3b4429a0434 239 Pfam PF00510 Cytochrome c oxidase subunit III 41 239 1.2E-18 T 14-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMK01_RS13425 dcd2ae7af30224664ff4c3b4429a0434 239 PANTHER PTHR11403 17 239 7.5E-99 T 14-09-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 AMK01_RS13425 dcd2ae7af30224664ff4c3b4429a0434 239 PANTHER PTHR11403:SF8 17 239 7.5E-99 T 14-09-2016 AMK01_RS13425 dcd2ae7af30224664ff4c3b4429a0434 239 Gene3D G3DSA:1.20.120.80 35 239 2.8E-53 T 14-09-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 AMK01_RS13425 dcd2ae7af30224664ff4c3b4429a0434 239 SUPERFAMILY SSF81452 21 239 1.44E-52 T 14-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 PANTHER PTHR32089:SF63 189 244 4.1E-114 T 14-09-2016 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 PANTHER PTHR32089:SF63 325 593 4.1E-114 T 14-09-2016 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 SUPERFAMILY SSF58104 310 591 3.27E-69 T 14-09-2016 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 SMART SM00283 343 590 2.2E-102 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 SUPERFAMILY SSF158472 211 259 3.14E-8 T 14-09-2016 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 413 589 9.1E-58 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 SMART SM00304 290 342 0.022 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 SMART SM00304 209 262 1.5E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 Gene3D G3DSA:1.10.287.950 358 562 1.2E-58 T 14-09-2016 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 PANTHER PTHR32089 189 244 4.1E-114 T 14-09-2016 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 PANTHER PTHR32089 325 593 4.1E-114 T 14-09-2016 AMK01_RS02815 b0766a48a2d51be56450f00564cf32ab 669 Pfam PF00672 HAMP domain 189 257 2.0E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS28425 3b0c3ef7938ec883c3d3b46f160e6246 282 Gene3D G3DSA:2.30.38.10 167 240 1.2E-11 T 14-09-2016 AMK01_RS28425 3b0c3ef7938ec883c3d3b46f160e6246 282 PANTHER PTHR24096 1 262 2.6E-48 T 14-09-2016 AMK01_RS28425 3b0c3ef7938ec883c3d3b46f160e6246 282 Pfam PF00501 AMP-binding enzyme 1 246 3.6E-46 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS28425 3b0c3ef7938ec883c3d3b46f160e6246 282 SUPERFAMILY SSF56801 1 264 1.31E-63 T 14-09-2016 AMK01_RS28425 3b0c3ef7938ec883c3d3b46f160e6246 282 Gene3D G3DSA:3.40.50.980 1 166 7.2E-30 T 14-09-2016 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 Gene3D G3DSA:3.90.400.10 111 180 1.0E-27 T 14-09-2016 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 PANTHER PTHR10357 449 513 1.0E-141 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 Gene3D G3DSA:3.20.20.80 9 110 5.5E-101 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 Gene3D G3DSA:3.20.20.80 182 473 5.5E-101 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 SUPERFAMILY SSF51011 474 548 9.6E-10 T 14-09-2016 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 Pfam PF16657 Maltogenic Amylase, C-terminal domain 474 540 3.2E-8 T 14-09-2016 IPR032091 Maltogenic Amylase, C-terminal AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 SMART SM00642 19 411 1.8E-118 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 Pfam PF00128 Alpha amylase, catalytic domain 34 385 2.9E-86 T 14-09-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 PANTHER PTHR10357 10 416 1.0E-141 T 14-09-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 PANTHER PTHR10357:SF142 10 416 1.0E-141 T 14-09-2016 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 PANTHER PTHR10357:SF142 449 513 1.0E-141 T 14-09-2016 AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 Gene3D G3DSA:2.60.40.1180 481 547 8.1E-10 T 14-09-2016 IPR013780 Glycosyl hydrolase, all-beta AMK01_RS15760 cf19e627f3b8997612ed2a7670e05b50 573 SUPERFAMILY SSF51445 10 471 1.33E-130 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS17615 c366a16508abd6219f2b5d95e87bde8a 403 SUPERFAMILY SSF111369 56 301 1.7E-70 T 14-09-2016 AMK01_RS17615 c366a16508abd6219f2b5d95e87bde8a 403 PANTHER PTHR30158:SF3 1 399 8.8E-114 T 14-09-2016 AMK01_RS17615 c366a16508abd6219f2b5d95e87bde8a 403 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 294 1.5E-14 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS17615 c366a16508abd6219f2b5d95e87bde8a 403 PANTHER PTHR30158 1 399 8.8E-114 T 14-09-2016 AMK01_RS17615 c366a16508abd6219f2b5d95e87bde8a 403 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 375 1.1E-72 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS17615 c366a16508abd6219f2b5d95e87bde8a 403 Gene3D G3DSA:2.40.50.100 175 209 5.9E-23 T 14-09-2016 AMK01_RS17615 c366a16508abd6219f2b5d95e87bde8a 403 Gene3D G3DSA:2.40.50.100 68 101 5.9E-23 T 14-09-2016 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 PANTHER PTHR11647 1 427 2.7E-125 T 14-09-2016 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 Gene3D G3DSA:2.30.40.10 5 74 1.7E-14 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 PANTHER PTHR11647:SF70 1 427 2.7E-125 T 14-09-2016 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 Hamap MF_00220_B Dihydroorotase [pyrC]. 4 428 32.658 T 14-09-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 Pfam PF01979 Amidohydrolase family 58 426 1.3E-19 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 SUPERFAMILY SSF51556 61 373 2.5E-90 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 SUPERFAMILY SSF51338 372 427 1.33E-24 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 SUPERFAMILY SSF51338 4 60 1.33E-24 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 Gene3D G3DSA:3.20.20.140 75 392 1.9E-84 T 14-09-2016 AMK01_RS08285 c79b32af8e4e431569b219a36ca963c5 429 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 42 427 9.9E-96 T 14-09-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS03960 6c6b6baecc265b7d3577490747f91784 356 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 63 74 - T 14-09-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS03960 6c6b6baecc265b7d3577490747f91784 356 Gene3D G3DSA:3.20.20.70 52 326 4.2E-39 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS03960 6c6b6baecc265b7d3577490747f91784 356 PANTHER PTHR11228 6 196 4.7E-19 T 14-09-2016 AMK01_RS03960 6c6b6baecc265b7d3577490747f91784 356 Pfam PF04055 Radical SAM superfamily 64 196 3.0E-9 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS03960 6c6b6baecc265b7d3577490747f91784 356 PANTHER PTHR11228:SF32 6 196 4.7E-19 T 14-09-2016 AMK01_RS03960 6c6b6baecc265b7d3577490747f91784 356 Pfam PF13186 Iron-sulfur cluster-binding domain 257 324 2.6E-10 T 14-09-2016 IPR023885 4Fe4S-binding SPASM domain AMK01_RS03960 6c6b6baecc265b7d3577490747f91784 356 SUPERFAMILY SSF102114 55 326 1.26E-38 T 14-09-2016 AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 PANTHER PTHR24220:SF481 8 289 1.5E-123 T 14-09-2016 AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 SMART SM00382 31 230 4.0E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 SUPERFAMILY SSF52540 7 246 7.56E-82 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 PANTHER PTHR24220 8 289 1.5E-123 T 14-09-2016 AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 Gene3D G3DSA:3.40.50.300 6 237 8.7E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 Pfam PF00005 ABC transporter 23 164 5.2E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 Pfam PF08402 TOBE domain 280 357 2.3E-13 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS14940 67ab6f30633b3d1727693b678c22ae8f 362 SUPERFAMILY SSF50331 240 357 2.69E-12 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS00835 7b5e2f1a9b7fefd5711f19bfb8ccb05c 330 PANTHER PTHR10584 1 330 3.2E-100 T 14-09-2016 AMK01_RS00835 7b5e2f1a9b7fefd5711f19bfb8ccb05c 330 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 272 285 - T 14-09-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK01_RS00835 7b5e2f1a9b7fefd5711f19bfb8ccb05c 330 SUPERFAMILY SSF53613 1 316 1.03E-79 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS00835 7b5e2f1a9b7fefd5711f19bfb8ccb05c 330 Gene3D G3DSA:3.40.1190.20 1 324 1.1E-72 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS00835 7b5e2f1a9b7fefd5711f19bfb8ccb05c 330 Pfam PF00294 pfkB family carbohydrate kinase 56 315 2.1E-47 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AMK01_RS00835 7b5e2f1a9b7fefd5711f19bfb8ccb05c 330 PANTHER PTHR10584:SF153 1 330 3.2E-100 T 14-09-2016 AMK01_RS04930 9f546eedbc65295fa0ed8baa5be5e775 161 Gene3D G3DSA:3.40.30.10 1 161 1.1E-57 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS04930 9f546eedbc65295fa0ed8baa5be5e775 161 SUPERFAMILY SSF52833 1 161 9.96E-31 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS04930 9f546eedbc65295fa0ed8baa5be5e775 161 Pfam PF08534 Redoxin 6 158 3.0E-35 T 14-09-2016 IPR013740 Redoxin GO:0016491 AMK01_RS04930 9f546eedbc65295fa0ed8baa5be5e775 161 PANTHER PTHR10430 1 161 2.2E-74 T 14-09-2016 AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 PIRSF PIRSF009283 8 364 1.3E-107 T 14-09-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 23 363 7.9E-123 T 14-09-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 168 285 6.0E-18 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 16 151 3.3E-50 T 14-09-2016 AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 SUPERFAMILY SSF54593 14 351 1.02E-78 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 Gene3D G3DSA:3.10.180.10 164 364 1.3E-64 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 Gene3D G3DSA:3.10.180.10 15 153 7.3E-37 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 PANTHER PTHR11959:SF1 6 363 5.1E-118 T 14-09-2016 AMK01_RS08805 f499f7d214854fb393809cfa9b0242ad 369 PANTHER PTHR11959 6 363 5.1E-118 T 14-09-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMK01_RS12030 95aa1c2cea549f218604ee51f5b70b4f 405 Pfam PF12832 MFS_1 like family 32 371 1.3E-41 T 14-09-2016 IPR024989 Major facilitator superfamily associated domain AMK01_RS12030 95aa1c2cea549f218604ee51f5b70b4f 405 PANTHER PTHR23522:SF3 7 378 1.5E-75 T 14-09-2016 AMK01_RS12030 95aa1c2cea549f218604ee51f5b70b4f 405 SUPERFAMILY SSF103473 16 393 1.44E-42 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS12030 95aa1c2cea549f218604ee51f5b70b4f 405 PIRSF PIRSF004925 10 400 9.3E-111 T 14-09-2016 IPR026032 Probable 3-phenylpropionic acid transporter AMK01_RS12030 95aa1c2cea549f218604ee51f5b70b4f 405 Gene3D G3DSA:1.20.1250.20 211 397 1.2E-23 T 14-09-2016 AMK01_RS12030 95aa1c2cea549f218604ee51f5b70b4f 405 PANTHER PTHR23522 7 378 1.5E-75 T 14-09-2016 AMK01_RS12030 95aa1c2cea549f218604ee51f5b70b4f 405 Gene3D G3DSA:1.20.1250.20 18 195 4.3E-19 T 14-09-2016 AMK01_RS19880 1ed9b18ecab8b17f9afcc40e763854df 403 Pfam PF01757 Acyltransferase family 9 372 3.2E-28 T 14-09-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK01_RS19880 1ed9b18ecab8b17f9afcc40e763854df 403 PANTHER PTHR23028 218 403 1.6E-22 T 14-09-2016 AMK01_RS19880 1ed9b18ecab8b17f9afcc40e763854df 403 PANTHER PTHR23028 5 186 1.6E-22 T 14-09-2016 AMK01_RS12310 c6bf43edfebb91beba8bac090eeb6f13 329 PANTHER PTHR11732 1 319 2.7E-195 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS12310 c6bf43edfebb91beba8bac090eeb6f13 329 Pfam PF00248 Aldo/keto reductase family 16 308 3.2E-72 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS12310 c6bf43edfebb91beba8bac090eeb6f13 329 SUPERFAMILY SSF51430 1 314 2.1E-99 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS12310 c6bf43edfebb91beba8bac090eeb6f13 329 PANTHER PTHR11732:SF269 1 319 2.7E-195 T 14-09-2016 AMK01_RS12310 c6bf43edfebb91beba8bac090eeb6f13 329 Gene3D G3DSA:3.20.20.100 1 322 4.3E-111 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 SUPERFAMILY SSF82714 194 273 3.14E-10 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 SUPERFAMILY SSF82714 712 796 2.62E-15 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 SUPERFAMILY SSF82866 798 1020 1.26E-43 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 SUPERFAMILY SSF82693 146 191 1.2E-15 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 SUPERFAMILY SSF82693 277 331 1.2E-15 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 Gene3D G3DSA:3.30.70.1430 49 149 2.5E-21 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 Gene3D G3DSA:3.30.2090.10 712 794 1.1E-15 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 Gene3D G3DSA:3.30.2090.10 194 273 3.9E-12 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PANTHER PTHR32063:SF18 10 1040 0.0 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 SUPERFAMILY SSF82866 305 498 2.62E-37 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 SUPERFAMILY SSF82693 49 145 9.77E-20 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PANTHER PTHR32063 10 1040 0.0 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 Pfam PF00873 AcrB/AcrD/AcrF family 13 1014 1.4E-172 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 Gene3D G3DSA:1.10.3850.10 282 500 6.1E-46 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 Gene3D G3DSA:1.10.3850.10 805 1016 2.5E-51 T 14-09-2016 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 1.6E-28 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.6E-28 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.6E-28 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.6E-28 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 1.6E-28 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.6E-28 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS19050 8f1effb2813dd25bf4f6497b17ace151 1047 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 1.6E-28 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 Pfam PF05401 Nodulation protein S (NodS) 531 669 2.2E-20 T 14-09-2016 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 Pfam PF01522 Polysaccharide deacetylase 823 956 2.0E-18 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 SUPERFAMILY SSF88713 784 968 1.45E-29 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 SUPERFAMILY SSF53335 549 699 2.23E-26 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 SUPERFAMILY SSF53448 7 224 7.69E-52 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 Pfam PF00535 Glycosyl transferase family 2 10 113 6.7E-26 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 PANTHER PTHR34216 707 992 4.1E-53 T 14-09-2016 AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 Gene3D G3DSA:3.20.20.370 818 958 8.6E-19 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 Gene3D G3DSA:3.40.50.150 531 698 3.0E-26 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS16505 a6e9706c5ace08b0ca33a40e1b834193 1000 Gene3D G3DSA:3.90.550.10 7 227 1.9E-51 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS20085 2e8f8152a8e060d1ebd9b3bf9b14de7f 235 Gene3D G3DSA:3.40.50.10090 47 139 1.1E-13 T 14-09-2016 AMK01_RS20085 2e8f8152a8e060d1ebd9b3bf9b14de7f 235 SUPERFAMILY SSF69618 1 235 4.45E-38 T 14-09-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20085 2e8f8152a8e060d1ebd9b3bf9b14de7f 235 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 232 4.8E-32 T 14-09-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS20085 2e8f8152a8e060d1ebd9b3bf9b14de7f 235 Gene3D G3DSA:3.40.50.10090 140 212 3.1E-9 T 14-09-2016 AMK01_RS19750 7a5762b06fbe9e926db990d6d268a3ce 640 Gene3D G3DSA:1.50.10.10 112 304 5.7E-19 T 14-09-2016 IPR012341 Six-hairpin glycosidase GO:0003824 AMK01_RS19750 7a5762b06fbe9e926db990d6d268a3ce 640 PANTHER PTHR31151:SF1 243 639 2.0E-211 T 14-09-2016 AMK01_RS19750 7a5762b06fbe9e926db990d6d268a3ce 640 PANTHER PTHR31151 243 639 2.0E-211 T 14-09-2016 AMK01_RS19750 7a5762b06fbe9e926db990d6d268a3ce 640 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 18 551 1.3E-193 T 14-09-2016 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 AMK01_RS19750 7a5762b06fbe9e926db990d6d268a3ce 640 PANTHER PTHR31151 2 218 2.0E-211 T 14-09-2016 AMK01_RS19750 7a5762b06fbe9e926db990d6d268a3ce 640 SUPERFAMILY SSF48208 71 414 3.4E-45 T 14-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK01_RS19750 7a5762b06fbe9e926db990d6d268a3ce 640 PANTHER PTHR31151:SF1 2 218 2.0E-211 T 14-09-2016 AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 SMART SM00072 14 197 5.8E-67 T 14-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 SUPERFAMILY SSF52540 13 199 1.15E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 ProSitePatterns PS00856 Guanylate kinase-like signature. 49 66 - T 14-09-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 PANTHER PTHR23117:SF13 11 211 1.5E-88 T 14-09-2016 AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 Gene3D G3DSA:3.30.63.10 59 96 4.5E-26 T 14-09-2016 AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 Pfam PF00625 Guanylate kinase 17 195 8.2E-51 T 14-09-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 Hamap MF_00328 Guanylate kinase [gmk]. 13 197 36.791 T 14-09-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 16 194 8.0E-73 T 14-09-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 PANTHER PTHR23117 11 211 1.5E-88 T 14-09-2016 AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 Gene3D G3DSA:3.40.50.300 97 210 2.9E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07415 27b76c03dc8d38e6e0ed3049b5578d11 220 Gene3D G3DSA:3.40.50.300 13 58 1.8E-4 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14220 a86d7df25fa9b63ee5633ddfdbdd17a6 375 Pfam PF13604 AAA domain 18 191 3.6E-25 T 14-09-2016 AMK01_RS14220 a86d7df25fa9b63ee5633ddfdbdd17a6 375 SUPERFAMILY SSF52540 5 159 4.45E-20 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14220 a86d7df25fa9b63ee5633ddfdbdd17a6 375 Gene3D G3DSA:3.40.50.300 6 132 1.3E-9 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14220 a86d7df25fa9b63ee5633ddfdbdd17a6 375 SUPERFAMILY SSF52540 134 274 6.59E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14220 a86d7df25fa9b63ee5633ddfdbdd17a6 375 SUPERFAMILY SSF52540 301 374 6.59E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14220 a86d7df25fa9b63ee5633ddfdbdd17a6 375 Pfam PF13538 UvrD-like helicase C-terminal domain 326 374 6.3E-19 T 14-09-2016 IPR027785 UvrD-like helicase C-terminal domain AMK01_RS14220 a86d7df25fa9b63ee5633ddfdbdd17a6 375 Gene3D G3DSA:3.40.50.300 136 239 5.7E-26 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14220 a86d7df25fa9b63ee5633ddfdbdd17a6 375 Gene3D G3DSA:3.40.50.300 315 374 5.7E-26 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 Gene3D G3DSA:3.30.70.270 92 263 3.7E-45 T 14-09-2016 AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 Pfam PF00563 EAL domain 272 501 2.3E-68 T 14-09-2016 IPR001633 EAL domain AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 PANTHER PTHR33121:SF13 243 514 1.7E-69 T 14-09-2016 AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 Pfam PF00990 Diguanylate cyclase, GGDEF domain 91 250 5.1E-32 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 SUPERFAMILY SSF141868 270 515 2.09E-82 T 14-09-2016 IPR001633 EAL domain AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 SMART SM00052 265 507 2.7E-100 T 14-09-2016 IPR001633 EAL domain AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 Gene3D G3DSA:3.20.20.450 268 514 1.8E-86 T 14-09-2016 IPR001633 EAL domain AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 89 254 1.8E-29 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 PANTHER PTHR33121 243 514 1.7E-69 T 14-09-2016 AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 SMART SM00267 80 255 9.9E-31 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS17755 065c76b5055a39b55fd9d2a4bdd261fe 523 SUPERFAMILY SSF55073 96 256 3.45E-34 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 SUPERFAMILY SSF46894 164 233 9.52E-19 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 ProSitePatterns PS00622 LuxR-type HTH domain signature. 187 214 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 203 5.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 187 5.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 215 5.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 SMART SM00421 170 227 1.2E-19 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 PANTHER PTHR26402 154 229 3.1E-15 T 14-09-2016 AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 Gene3D G3DSA:1.10.10.10 172 233 1.3E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 172 227 2.2E-16 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03335 301cdf390ef1863887c1b798ea823dba 234 PANTHER PTHR26402:SF432 154 229 3.1E-15 T 14-09-2016 AMK01_RS13170 b411030951141290235b59cb8fe16845 240 Pfam PF02586 SOS response associated peptidase (SRAP) 1 219 4.5E-53 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS13170 b411030951141290235b59cb8fe16845 240 SUPERFAMILY SSF143081 2 231 5.1E-66 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS13170 b411030951141290235b59cb8fe16845 240 PANTHER PTHR13604 2 232 3.3E-61 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS13170 b411030951141290235b59cb8fe16845 240 Gene3D G3DSA:3.90.1680.10 1 231 6.0E-61 T 14-09-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS05815 35224111656f8ee1d68bdd6ba6c17446 247 PANTHER PTHR23293 59 235 2.1E-63 T 14-09-2016 AMK01_RS05815 35224111656f8ee1d68bdd6ba6c17446 247 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 210 8.7E-36 T 14-09-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 AMK01_RS05815 35224111656f8ee1d68bdd6ba6c17446 247 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 41 234 2.1E-81 T 14-09-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 AMK01_RS05815 35224111656f8ee1d68bdd6ba6c17446 247 PANTHER PTHR23293:SF11 59 235 2.1E-63 T 14-09-2016 AMK01_RS05815 35224111656f8ee1d68bdd6ba6c17446 247 Gene3D G3DSA:3.40.50.620 31 206 2.4E-44 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS05815 35224111656f8ee1d68bdd6ba6c17446 247 SUPERFAMILY SSF52402 10 198 7.78E-39 T 14-09-2016 AMK01_RS05815 35224111656f8ee1d68bdd6ba6c17446 247 PIRSF PIRSF000857 4 241 9.1E-73 T 14-09-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 AMK01_RS16695 dc3467ef478b1f4d61dc413919cadc93 199 PANTHER PTHR39327 41 196 1.7E-30 T 14-09-2016 AMK01_RS16695 dc3467ef478b1f4d61dc413919cadc93 199 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 48 199 2.6E-45 T 14-09-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMK01_RS16695 dc3467ef478b1f4d61dc413919cadc93 199 PANTHER PTHR39327:SF2 41 196 1.7E-30 T 14-09-2016 AMK01_RS04220 5f8aac24dc25a3efea4cd719622c69a6 236 Gene3D G3DSA:1.20.1050.10 102 226 4.5E-41 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS04220 5f8aac24dc25a3efea4cd719622c69a6 236 SUPERFAMILY SSF47616 96 230 1.95E-33 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS04220 5f8aac24dc25a3efea4cd719622c69a6 236 SUPERFAMILY SSF52833 11 103 1.51E-22 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS04220 5f8aac24dc25a3efea4cd719622c69a6 236 PANTHER PTHR11260:SF284 11 230 8.4E-66 T 14-09-2016 AMK01_RS04220 5f8aac24dc25a3efea4cd719622c69a6 236 Pfam PF00043 Glutathione S-transferase, C-terminal domain 151 223 3.5E-13 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AMK01_RS04220 5f8aac24dc25a3efea4cd719622c69a6 236 Pfam PF02798 Glutathione S-transferase, N-terminal domain 22 99 4.0E-13 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS04220 5f8aac24dc25a3efea4cd719622c69a6 236 PANTHER PTHR11260 11 230 8.4E-66 T 14-09-2016 AMK01_RS04220 5f8aac24dc25a3efea4cd719622c69a6 236 Gene3D G3DSA:3.40.30.10 9 101 2.1E-27 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19155 04c8b51c9235a2ceac3cbe9d77d46a78 317 PANTHER PTHR30193 3 317 1.0E-113 T 14-09-2016 AMK01_RS19155 04c8b51c9235a2ceac3cbe9d77d46a78 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 310 2.9E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19155 04c8b51c9235a2ceac3cbe9d77d46a78 317 Gene3D G3DSA:1.10.3720.10 89 308 3.7E-55 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19155 04c8b51c9235a2ceac3cbe9d77d46a78 317 PANTHER PTHR30193:SF29 3 317 1.0E-113 T 14-09-2016 AMK01_RS19155 04c8b51c9235a2ceac3cbe9d77d46a78 317 SUPERFAMILY SSF161098 87 303 6.02E-48 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07315 4b98022e087ac6f6b75c10b965b710e5 205 PANTHER PTHR36926 2 164 1.5E-38 T 14-09-2016 AMK01_RS07315 4b98022e087ac6f6b75c10b965b710e5 205 PANTHER PTHR36926:SF1 2 164 1.5E-38 T 14-09-2016 AMK01_RS07315 4b98022e087ac6f6b75c10b965b710e5 205 Pfam PF02674 Colicin V production protein 6 148 1.8E-29 T 14-09-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMK01_RS12225 4378e127801c37bbba57a2c74dd21f85 356 SUPERFAMILY SSF81345 17 349 1.96E-76 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AMK01_RS12225 4378e127801c37bbba57a2c74dd21f85 356 Gene3D G3DSA:1.10.3470.10 17 352 2.8E-95 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AMK01_RS12225 4378e127801c37bbba57a2c74dd21f85 356 PANTHER PTHR30472 15 356 5.5E-146 T 14-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMK01_RS12225 4378e127801c37bbba57a2c74dd21f85 356 Pfam PF01032 FecCD transport family 36 349 1.1E-81 T 14-09-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMK01_RS12225 4378e127801c37bbba57a2c74dd21f85 356 PANTHER PTHR30472:SF25 15 356 5.5E-146 T 14-09-2016 AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 SUPERFAMILY SSF52540 4 243 8.63E-84 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 PANTHER PTHR24220 5 311 2.8E-156 T 14-09-2016 AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 SMART SM00382 28 212 1.3E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 Gene3D G3DSA:2.40.50.100 240 287 5.6E-12 T 14-09-2016 AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 Gene3D G3DSA:2.40.50.100 347 359 5.6E-12 T 14-09-2016 AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 Pfam PF00005 ABC transporter 19 161 1.9E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 PANTHER PTHR24220:SF151 5 311 2.8E-156 T 14-09-2016 AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 SUPERFAMILY SSF50331 237 359 8.26E-29 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 Gene3D G3DSA:3.40.50.300 4 235 3.2E-77 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 Gene3D G3DSA:2.40.50.140 288 343 5.0E-19 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 Pfam PF08402 TOBE domain 282 353 1.9E-7 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS03705 d74039a679dde34a80b6202357938c1d 362 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 SUPERFAMILY SSF53850 92 290 1.07E-27 T 14-09-2016 AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 Gene3D G3DSA:1.10.10.10 2 84 2.3E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 Gene3D G3DSA:3.40.190.10 179 256 4.7E-15 T 14-09-2016 AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 SUPERFAMILY SSF46785 3 84 3.74E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 Pfam PF03466 LysR substrate binding domain 92 288 3.5E-27 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.0E-18 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 PANTHER PTHR30537 1 290 1.2E-74 T 14-09-2016 AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 PANTHER PTHR30537:SF26 1 290 1.2E-74 T 14-09-2016 AMK01_RS04710 99b535eac675ad3b53d13e0a3864079a 294 Gene3D G3DSA:3.40.190.10 93 178 3.9E-20 T 14-09-2016 AMK01_RS18755 af3e24ebf7a6c7af5bd42d232d1b2eeb 358 PANTHER PTHR40659 235 352 1.1E-24 T 14-09-2016 AMK01_RS18755 af3e24ebf7a6c7af5bd42d232d1b2eeb 358 PANTHER PTHR40659 46 207 1.1E-24 T 14-09-2016 AMK01_RS18755 af3e24ebf7a6c7af5bd42d232d1b2eeb 358 Pfam PF03824 High-affinity nickel-transport protein 79 356 8.3E-81 T 14-09-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 PANTHER PTHR13748:SF4 351 390 1.1E-167 T 14-09-2016 AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 PANTHER PTHR13748:SF4 5 335 1.1E-167 T 14-09-2016 AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 Gene3D G3DSA:3.40.50.300 6 232 5.3E-70 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 SUPERFAMILY SSF52540 4 324 8.6E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 Gene3D G3DSA:3.30.1220.10 252 377 2.0E-18 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 SMART SM00833 262 377 1.2E-50 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 PANTHER PTHR13748 5 335 1.1E-167 T 14-09-2016 AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 262 377 7.5E-28 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 PANTHER PTHR13748 351 390 1.1E-167 T 14-09-2016 AMK01_RS07020 f96e72e8fd982b8d2f14468585ff7a8e 410 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 214 8.6E-53 T 14-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 Pfam PF13458 Periplasmic binding protein 36 381 1.8E-75 T 14-09-2016 IPR028081 Leucine-binding protein domain AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 SUPERFAMILY SSF53822 36 385 3.36E-96 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 296 309 7.6E-13 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 37 53 7.6E-13 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 59 75 7.6E-13 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 100 110 7.6E-13 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 PANTHER PTHR30483 7 395 2.2E-108 T 14-09-2016 AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 Gene3D G3DSA:3.40.50.2300 308 367 3.6E-57 T 14-09-2016 AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 Gene3D G3DSA:3.40.50.2300 31 164 3.6E-57 T 14-09-2016 AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 PANTHER PTHR30483:SF20 7 395 2.2E-108 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS09945 6ccc10912e9a6a956c081aa05311fa04 397 Gene3D G3DSA:3.40.50.2300 174 307 3.1E-10 T 14-09-2016 AMK01_RS06705 bfce9fd5bafda738ecaf06c058e5b82a 407 Pfam PF07690 Major Facilitator Superfamily 31 342 1.3E-34 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS06705 bfce9fd5bafda738ecaf06c058e5b82a 407 PANTHER PTHR23501 29 403 6.3E-105 T 14-09-2016 AMK01_RS06705 bfce9fd5bafda738ecaf06c058e5b82a 407 Gene3D G3DSA:1.20.1250.20 29 206 1.2E-26 T 14-09-2016 AMK01_RS06705 bfce9fd5bafda738ecaf06c058e5b82a 407 PANTHER PTHR23501:SF4 29 403 6.3E-105 T 14-09-2016 AMK01_RS06705 bfce9fd5bafda738ecaf06c058e5b82a 407 Gene3D G3DSA:1.20.1250.20 215 397 8.4E-12 T 14-09-2016 AMK01_RS06705 bfce9fd5bafda738ecaf06c058e5b82a 407 SUPERFAMILY SSF103473 25 401 5.62E-54 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 PANTHER PTHR10584:SF166 1 299 7.4E-74 T 14-09-2016 AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 SUPERFAMILY SSF53613 2 298 2.34E-71 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 PANTHER PTHR10584 1 299 7.4E-74 T 14-09-2016 AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 PRINTS PR00990 Ribokinase signature 214 225 9.0E-37 T 14-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 PRINTS PR00990 Ribokinase signature 4 25 9.0E-37 T 14-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 PRINTS PR00990 Ribokinase signature 170 185 9.0E-37 T 14-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 PRINTS PR00990 Ribokinase signature 31 50 9.0E-37 T 14-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 PRINTS PR00990 Ribokinase signature 102 115 9.0E-37 T 14-09-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 Pfam PF00294 pfkB family carbohydrate kinase 2 290 1.4E-58 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AMK01_RS02245 e8d618ffcb02a6da34323fcc83e229e9 299 Gene3D G3DSA:3.40.1190.20 2 298 7.0E-78 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 Pfam PF00005 ABC transporter 20 161 1.4E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 Gene3D G3DSA:2.40.50.140 283 338 2.7E-10 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 SMART SM00382 28 211 6.4E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 Pfam PF08402 TOBE domain 278 346 7.4E-11 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 Gene3D G3DSA:2.40.50.100 340 354 1.8E-4 T 14-09-2016 AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 Gene3D G3DSA:2.40.50.100 239 282 1.8E-4 T 14-09-2016 AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 SUPERFAMILY SSF52540 4 244 3.95E-80 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 Gene3D G3DSA:3.40.50.300 4 234 1.1E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 PANTHER PTHR24220:SF151 5 319 4.9E-136 T 14-09-2016 AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 SUPERFAMILY SSF50331 236 353 1.43E-22 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12975 ae8ac6de30b80187b603830db24e494c 365 PANTHER PTHR24220 5 319 4.9E-136 T 14-09-2016 AMK01_RS12000 730a24b56c52c2dd1b32762129bef252 291 SUPERFAMILY SSF56601 7 261 8.0E-72 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS12000 730a24b56c52c2dd1b32762129bef252 291 PANTHER PTHR21581:SF3 1 261 4.1E-65 T 14-09-2016 AMK01_RS12000 730a24b56c52c2dd1b32762129bef252 291 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 247 2.1E-66 T 14-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK01_RS12000 730a24b56c52c2dd1b32762129bef252 291 Gene3D G3DSA:3.40.710.10 8 261 6.6E-83 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS12000 730a24b56c52c2dd1b32762129bef252 291 PANTHER PTHR21581 1 261 4.1E-65 T 14-09-2016 AMK01_RS12000 730a24b56c52c2dd1b32762129bef252 291 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 2.4E-12 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS12000 730a24b56c52c2dd1b32762129bef252 291 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 54 65 2.4E-12 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS12000 730a24b56c52c2dd1b32762129bef252 291 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 147 2.4E-12 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS10975 2a2888d4fe252078c94ae86413a8c2e0 241 PANTHER PTHR30133 16 241 6.3E-71 T 14-09-2016 AMK01_RS10975 2a2888d4fe252078c94ae86413a8c2e0 241 Gene3D G3DSA:1.10.3720.10 22 233 2.7E-38 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10975 2a2888d4fe252078c94ae86413a8c2e0 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 233 1.6E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10975 2a2888d4fe252078c94ae86413a8c2e0 241 SUPERFAMILY SSF161098 22 228 8.11E-35 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10975 2a2888d4fe252078c94ae86413a8c2e0 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 128 4.8E-18 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS13840 4c16c7d384afc70ab5481c4eaf363058 326 PANTHER PTHR10366:SF289 4 320 4.6E-37 T 14-09-2016 AMK01_RS13840 4c16c7d384afc70ab5481c4eaf363058 326 SUPERFAMILY SSF51735 4 299 3.71E-32 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13840 4c16c7d384afc70ab5481c4eaf363058 326 PANTHER PTHR10366 4 320 4.6E-37 T 14-09-2016 AMK01_RS13840 4c16c7d384afc70ab5481c4eaf363058 326 Pfam PF13460 NAD(P)H-binding 9 150 5.6E-9 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13840 4c16c7d384afc70ab5481c4eaf363058 326 Gene3D G3DSA:3.40.50.720 4 292 5.8E-22 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06585 2f67b9ae88b73ded2c271c6d2cc592a1 166 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 141 30.494 T 14-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMK01_RS06585 2f67b9ae88b73ded2c271c6d2cc592a1 166 Gene3D G3DSA:2.40.50.140 25 125 2.7E-32 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS06585 2f67b9ae88b73ded2c271c6d2cc592a1 166 SUPERFAMILY SSF82093 29 137 1.83E-33 T 14-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMK01_RS06585 2f67b9ae88b73ded2c271c6d2cc592a1 166 Pfam PF03100 CcmE 3 131 2.9E-41 T 14-09-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AMK01_RS06585 2f67b9ae88b73ded2c271c6d2cc592a1 166 PANTHER PTHR34128:SF1 3 166 8.8E-47 T 14-09-2016 AMK01_RS06585 2f67b9ae88b73ded2c271c6d2cc592a1 166 PANTHER PTHR34128 3 166 8.8E-47 T 14-09-2016 AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 Pfam PF00107 Zinc-binding dehydrogenase 153 258 2.4E-31 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 Gene3D G3DSA:3.40.50.720 150 258 2.3E-31 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 Gene3D G3DSA:3.90.180.10 3 149 5.3E-42 T 14-09-2016 IPR011032 GroES-like AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 SUPERFAMILY SSF51735 113 272 3.94E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 PANTHER PTHR11695 18 326 2.5E-125 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 PANTHER PTHR11695:SF578 18 326 2.5E-125 T 14-09-2016 AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 95 7.0E-10 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 SUPERFAMILY SSF50129 4 146 8.11E-35 T 14-09-2016 IPR011032 GroES-like AMK01_RS10675 a9b04e324cf9b4832729b80a6162967a 326 SMART SM00829 13 324 5.7E-33 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 SUPERFAMILY SSF51569 12 335 2.2E-131 T 14-09-2016 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 PIRSF PIRSF001415 7 337 3.0E-136 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 PANTHER PTHR11458 14 336 6.2E-156 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 200 219 3.5E-56 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 132 146 3.5E-56 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 3.5E-56 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 162 181 3.5E-56 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 3.5E-56 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 3.5E-56 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 15 332 2.9E-130 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 SMART SM01004 12 334 5.6E-214 T 14-09-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 14-09-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK01_RS07665 30d1e04e8e3e312b61d4ad27ae93a7b1 337 Gene3D G3DSA:3.20.20.70 13 336 3.0E-137 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS18680 94be70d9b3854fba7ecde30127683063 259 PANTHER PTHR11922:SF18 31 68 1.0E-43 T 14-09-2016 AMK01_RS18680 94be70d9b3854fba7ecde30127683063 259 PANTHER PTHR11922:SF18 84 243 1.0E-43 T 14-09-2016 AMK01_RS18680 94be70d9b3854fba7ecde30127683063 259 Pfam PF07722 Peptidase C26 4 222 6.2E-72 T 14-09-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 AMK01_RS18680 94be70d9b3854fba7ecde30127683063 259 PANTHER PTHR11922 31 68 1.0E-43 T 14-09-2016 AMK01_RS18680 94be70d9b3854fba7ecde30127683063 259 Gene3D G3DSA:3.40.50.880 2 245 5.9E-44 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS18680 94be70d9b3854fba7ecde30127683063 259 PANTHER PTHR11922 84 243 1.0E-43 T 14-09-2016 AMK01_RS18680 94be70d9b3854fba7ecde30127683063 259 SUPERFAMILY SSF52317 25 244 7.8E-38 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS01300 e5abf150207a5eb8291bdf0268559a6d 382 SUPERFAMILY SSF53383 4 365 2.45E-100 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS01300 e5abf150207a5eb8291bdf0268559a6d 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 363 1.5E-117 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS01300 e5abf150207a5eb8291bdf0268559a6d 382 PANTHER PTHR30244 1 370 1.5E-140 T 14-09-2016 AMK01_RS01300 e5abf150207a5eb8291bdf0268559a6d 382 Gene3D G3DSA:3.40.640.10 5 246 5.7E-85 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS01300 e5abf150207a5eb8291bdf0268559a6d 382 PIRSF PIRSF000390 1 370 2.3E-119 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS01300 e5abf150207a5eb8291bdf0268559a6d 382 PANTHER PTHR30244:SF16 1 370 1.5E-140 T 14-09-2016 AMK01_RS01300 e5abf150207a5eb8291bdf0268559a6d 382 Gene3D G3DSA:3.90.1150.10 247 368 1.3E-16 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 SMART SM00530 12 67 1.6E-17 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 Pfam PF01381 Helix-turn-helix 13 65 2.9E-15 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 PANTHER PTHR10245 1 184 1.7E-54 T 14-09-2016 AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 Gene3D G3DSA:1.10.260.40 2 74 2.0E-24 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 SUPERFAMILY SSF51182 53 186 6.11E-28 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 Pfam PF07883 Cupin domain 112 183 2.7E-12 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 Gene3D G3DSA:2.60.120.10 75 186 1.0E-25 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 PANTHER PTHR10245:SF21 1 184 1.7E-54 T 14-09-2016 AMK01_RS01425 ac931d986f46b9bd6fda0de5304b3495 189 SUPERFAMILY SSF47413 5 73 8.85E-20 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS04765 c916f27d4784d196deb9e51b30c71b78 64 SUPERFAMILY SSF54786 6 61 2.71E-10 T 14-09-2016 AMK01_RS04765 c916f27d4784d196deb9e51b30c71b78 64 Gene3D G3DSA:3.30.920.30 6 61 9.4E-11 T 14-09-2016 AMK01_RS04765 c916f27d4784d196deb9e51b30c71b78 64 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 60 5.2E-8 T 14-09-2016 IPR012933 HicA mRNA interferase family GO:0003729 AMK01_RS26120 07f001d2d1618d055effd6e56a2cc353 233 PANTHER PTHR30008 2 219 1.0E-49 T 14-09-2016 AMK01_RS26120 07f001d2d1618d055effd6e56a2cc353 233 Pfam PF02601 Exonuclease VII, large subunit 2 219 2.7E-55 T 14-09-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMK01_RS26120 07f001d2d1618d055effd6e56a2cc353 233 PANTHER PTHR30008:SF0 2 219 1.0E-49 T 14-09-2016 AMK01_RS11540 c8f1dc8412a795e5b3cfa05a9252b60c 489 PANTHER PTHR30508 2 489 0.0 T 14-09-2016 AMK01_RS11540 c8f1dc8412a795e5b3cfa05a9252b60c 489 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 18 480 9.3E-189 T 14-09-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AMK01_RS11540 c8f1dc8412a795e5b3cfa05a9252b60c 489 PANTHER PTHR30508:SF1 2 489 0.0 T 14-09-2016 AMK01_RS11540 c8f1dc8412a795e5b3cfa05a9252b60c 489 Pfam PF01458 Uncharacterized protein family (UPF0051) 227 460 1.5E-66 T 14-09-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMK01_RS11540 c8f1dc8412a795e5b3cfa05a9252b60c 489 SUPERFAMILY SSF101960 39 486 1.18E-135 T 14-09-2016 AMK01_RS01715 d1c882f1879b99ddeac521e2e4de6dd4 120 PANTHER PTHR34183:SF2 32 120 1.2E-38 T 14-09-2016 AMK01_RS01715 d1c882f1879b99ddeac521e2e4de6dd4 120 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 33 119 2.4E-34 T 14-09-2016 IPR012997 Rare lipoprotein A AMK01_RS01715 d1c882f1879b99ddeac521e2e4de6dd4 120 PANTHER PTHR34183 32 120 1.2E-38 T 14-09-2016 AMK01_RS01715 d1c882f1879b99ddeac521e2e4de6dd4 120 SUPERFAMILY SSF50685 31 119 8.02E-14 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS01715 d1c882f1879b99ddeac521e2e4de6dd4 120 Pfam PF03330 Lytic transglycolase 31 116 2.2E-26 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS01715 d1c882f1879b99ddeac521e2e4de6dd4 120 Gene3D G3DSA:2.40.40.10 56 119 1.2E-8 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 SUPERFAMILY SSF48452 303 394 2.63E-6 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 SUPERFAMILY SSF88659 107 169 3.66E-6 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 Gene3D G3DSA:1.25.40.10 325 397 3.3E-6 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 PANTHER PTHR30173:SF7 1 382 1.7E-87 T 14-09-2016 AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 Gene3D G3DSA:1.10.10.10 109 169 1.9E-6 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 Gene3D G3DSA:1.10.1740.10 14 83 5.9E-10 T 14-09-2016 AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 Pfam PF04542 Sigma-70 region 2 21 82 2.8E-9 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 SUPERFAMILY SSF88946 14 97 7.06E-11 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS12070 a37da7464dd4df9ec80582ddd8fa292e 412 PANTHER PTHR30173 1 382 1.7E-87 T 14-09-2016 AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 Pfam PF00005 ABC transporter 56 203 2.4E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 SMART SM00382 64 253 8.7E-16 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 Gene3D G3DSA:3.40.50.300 52 276 7.9E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 ProSitePatterns PS00211 ABC transporters family signature. 176 190 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 PANTHER PTHR24220 18 28 1.3E-131 T 14-09-2016 AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 PANTHER PTHR24220 52 284 1.3E-131 T 14-09-2016 AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 SUPERFAMILY SSF52540 54 280 4.43E-75 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 PANTHER PTHR24220:SF374 18 28 1.3E-131 T 14-09-2016 AMK01_RS10545 e9eaa73163cfdba47c2acc40b1e6826a 349 PANTHER PTHR24220:SF374 52 284 1.3E-131 T 14-09-2016 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 19 1046 0.0 T 14-09-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 SUPERFAMILY SSF89550 19 286 8.63E-9 T 14-09-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 Gene3D G3DSA:1.10.150.280 850 884 1.7E-7 T 14-09-2016 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 321 752 9.2E-175 T 14-09-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 Pfam PF14579 Helix-hairpin-helix motif 825 913 2.8E-24 T 14-09-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 PANTHER PTHR32294:SF0 16 1165 0.0 T 14-09-2016 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 Gene3D G3DSA:3.20.20.140 19 280 1.4E-17 T 14-09-2016 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 SUPERFAMILY SSF160975 849 897 3.14E-6 T 14-09-2016 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 Gene3D G3DSA:2.40.50.140 1008 1071 1.5E-4 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 SMART SM00481 20 87 9.5E-17 T 14-09-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 Pfam PF02811 PHP domain 21 198 1.3E-30 T 14-09-2016 IPR004013 PHP domain GO:0003824 AMK01_RS08210 b6666d41173db849d315f3a404c27ff3 1165 PANTHER PTHR32294 16 1165 0.0 T 14-09-2016 AMK01_RS12295 d480713378a74553a81a970000980ade 172 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 139 5.0E-49 T 14-09-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AMK01_RS12295 d480713378a74553a81a970000980ade 172 PANTHER PTHR40072:SF2 5 113 1.8E-19 T 14-09-2016 AMK01_RS12295 d480713378a74553a81a970000980ade 172 SUPERFAMILY SSF52540 4 164 1.15E-22 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12295 d480713378a74553a81a970000980ade 172 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 6 163 8.5E-54 T 14-09-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AMK01_RS12295 d480713378a74553a81a970000980ade 172 Gene3D G3DSA:3.40.50.300 3 166 4.0E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12295 d480713378a74553a81a970000980ade 172 PANTHER PTHR40072 5 113 1.8E-19 T 14-09-2016 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 PANTHER PTHR10066:SF12 42 140 2.4E-69 T 14-09-2016 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 Gene3D G3DSA:2.60.120.260 15 122 6.7E-7 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 SUPERFAMILY SSF51445 285 631 2.84E-74 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 Gene3D G3DSA:2.60.40.320 179 272 5.6E-4 T 14-09-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 SUPERFAMILY SSF49303 239 273 8.63E-7 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 PANTHER PTHR10066 42 140 2.4E-69 T 14-09-2016 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 PANTHER PTHR10066 173 807 2.4E-69 T 14-09-2016 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 PANTHER PTHR10066:SF12 173 807 2.4E-69 T 14-09-2016 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 Gene3D G3DSA:3.20.20.80 284 516 3.5E-34 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 Gene3D G3DSA:3.20.20.80 564 633 3.5E-34 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 SUPERFAMILY SSF49785 14 190 4.42E-24 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS20775 829f04938bd7ad6a836922e8a2b8f9ef 826 SUPERFAMILY SSF49303 742 817 1.73E-10 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS21125 7b4bdbfb991b0de01db3b6d00cf17303 74 Pfam PF07896 Protein of unknown function (DUF1674) 35 74 6.5E-13 T 14-09-2016 IPR012875 Protein of unknown function DUF1674 AMK01_RS21125 7b4bdbfb991b0de01db3b6d00cf17303 74 PANTHER PTHR28524 47 74 3.7E-13 T 14-09-2016 AMK01_RS21125 7b4bdbfb991b0de01db3b6d00cf17303 74 PANTHER PTHR28524:SF1 47 74 3.7E-13 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.9E-5 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PRINTS PR00301 70kDa heat shock protein signature 374 390 3.9E-5 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PRINTS PR00301 70kDa heat shock protein signature 64 72 3.9E-5 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 377 391 - T 14-09-2016 IPR018181 Heat shock protein 70, conserved site AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PANTHER PTHR19375:SF182 293 421 1.1E-75 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PANTHER PTHR19375:SF182 2 32 1.1E-75 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 SUPERFAMILY SSF53067 299 420 3.42E-31 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 SUPERFAMILY SSF53067 182 247 3.42E-31 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 SUPERFAMILY SSF53067 4 180 2.12E-19 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PANTHER PTHR19375:SF182 57 240 1.1E-75 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 Gene3D G3DSA:3.30.420.40 192 221 4.4E-14 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 Gene3D G3DSA:3.30.420.40 359 400 4.4E-14 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 Pfam PF00012 Hsp70 protein 308 403 1.6E-7 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 Pfam PF00012 Hsp70 protein 153 236 7.2E-6 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PANTHER PTHR19375 293 421 1.1E-75 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 Gene3D G3DSA:3.30.420.40 109 191 1.6E-19 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 Gene3D G3DSA:3.30.420.40 4 76 1.6E-19 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PANTHER PTHR19375 2 32 1.1E-75 T 14-09-2016 AMK01_RS06655 905530e497c7fd91181ce387765a05ff 430 PANTHER PTHR19375 57 240 1.1E-75 T 14-09-2016 AMK01_RS10010 b1411f6d7a2f4951d5cf5607f72197cc 287 Gene3D G3DSA:3.30.470.10 4 118 1.0E-33 T 14-09-2016 AMK01_RS10010 b1411f6d7a2f4951d5cf5607f72197cc 287 Pfam PF01063 Amino-transferase class IV 31 257 2.1E-46 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS10010 b1411f6d7a2f4951d5cf5607f72197cc 287 Gene3D G3DSA:3.20.10.10 129 282 1.7E-45 T 14-09-2016 AMK01_RS10010 b1411f6d7a2f4951d5cf5607f72197cc 287 SUPERFAMILY SSF56752 2 281 3.4E-72 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS10010 b1411f6d7a2f4951d5cf5607f72197cc 287 PANTHER PTHR11825:SF38 4 287 2.0E-93 T 14-09-2016 AMK01_RS10010 b1411f6d7a2f4951d5cf5607f72197cc 287 PANTHER PTHR11825 4 287 2.0E-93 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 SUPERFAMILY SSF51395 6 352 1.25E-108 T 14-09-2016 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 Pfam PF01180 Dihydroorotate dehydrogenase 45 338 2.7E-92 T 14-09-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 PANTHER PTHR11938:SF47 16 340 1.7E-111 T 14-09-2016 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 334 42.91 T 14-09-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 8 347 3.3E-116 T 14-09-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-09-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 PANTHER PTHR11938 16 340 1.7E-111 T 14-09-2016 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 Gene3D G3DSA:3.20.20.70 6 350 3.8E-130 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS02860 a51ed30838a10da8433337f5d1cc8566 362 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 290 310 - T 14-09-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 PANTHER PTHR10890 1 460 1.2E-198 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 SUPERFAMILY SSF52374 6 333 8.16E-86 T 14-09-2016 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 21 333 9.9E-111 T 14-09-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 Gene3D G3DSA:3.40.50.620 24 325 7.2E-97 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 SUPERFAMILY SSF47323 347 453 1.7E-22 T 14-09-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 Gene3D G3DSA:1.20.120.640 326 393 4.1E-5 T 14-09-2016 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 7 456 36.023 T 14-09-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 30 41 4.7E-31 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 234 255 4.7E-31 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 68 77 4.7E-31 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 203 221 4.7E-31 T 14-09-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK01_RS07295 5f20bac64b0f2131a09e8ed647cebbf6 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 7 450 8.7E-133 T 14-09-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AMK01_RS09840 0dde456151f29abab1d785a99b67b7e9 192 PANTHER PTHR37816:SF1 15 190 1.1E-30 T 14-09-2016 AMK01_RS09840 0dde456151f29abab1d785a99b67b7e9 192 SUPERFAMILY SSF52540 16 118 3.1E-16 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09840 0dde456151f29abab1d785a99b67b7e9 192 Gene3D G3DSA:3.40.50.300 16 113 7.7E-15 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09840 0dde456151f29abab1d785a99b67b7e9 192 PANTHER PTHR37816 15 190 1.1E-30 T 14-09-2016 AMK01_RS01935 9286925b02ca36137c75486f7c57081a 522 PANTHER PTHR10362 8 486 2.0E-36 T 14-09-2016 AMK01_RS01935 9286925b02ca36137c75486f7c57081a 522 Gene3D G3DSA:1.10.275.10 8 196 1.0E-48 T 14-09-2016 IPR024083 Fumarase/histidase, N-terminal AMK01_RS01935 9286925b02ca36137c75486f7c57081a 522 PANTHER PTHR10362:SF7 8 486 2.0E-36 T 14-09-2016 AMK01_RS01935 9286925b02ca36137c75486f7c57081a 522 Gene3D G3DSA:1.20.200.10 201 498 6.7E-40 T 14-09-2016 AMK01_RS01935 9286925b02ca36137c75486f7c57081a 522 Pfam PF00221 Aromatic amino acid lyase 16 463 1.9E-89 T 14-09-2016 IPR001106 Aromatic amino acid lyase AMK01_RS01935 9286925b02ca36137c75486f7c57081a 522 SUPERFAMILY SSF48557 4 493 1.73E-108 T 14-09-2016 IPR008948 L-Aspartase-like GO:0003824 AMK01_RS07830 f3db6f68bd5358fdcac039100f0ed991 210 Gene3D G3DSA:3.40.50.150 38 209 5.4E-39 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS07830 f3db6f68bd5358fdcac039100f0ed991 210 SUPERFAMILY SSF53335 25 198 1.56E-37 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS07830 f3db6f68bd5358fdcac039100f0ed991 210 Pfam PF13489 Methyltransferase domain 41 187 8.7E-23 T 14-09-2016 AMK01_RS07830 f3db6f68bd5358fdcac039100f0ed991 210 PANTHER PTHR10108 42 197 1.2E-24 T 14-09-2016 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 PANTHER PTHR32089 199 491 3.2E-63 T 14-09-2016 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 Gene3D G3DSA:1.10.490.10 10 168 2.9E-28 T 14-09-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 SUPERFAMILY SSF46458 11 167 1.01E-20 T 14-09-2016 IPR009050 Globin-like AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 Gene3D G3DSA:1.10.287.950 259 458 1.4E-43 T 14-09-2016 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 Pfam PF11563 Protoglobin 12 174 4.4E-37 T 14-09-2016 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 SUPERFAMILY SSF58104 208 492 1.57E-53 T 14-09-2016 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 262 291 3.6E-29 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 416 445 3.6E-29 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 397 3.6E-29 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 339 366 3.6E-29 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 487 1.0E-42 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS03375 71fa57578c2f10e74dd28bdd796ffa86 543 SMART SM00283 241 488 4.8E-67 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS20385 d3661ad02e50de713dbe38e9c4ede95e 151 Gene3D G3DSA:2.60.120.10 9 144 6.9E-29 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS20385 d3661ad02e50de713dbe38e9c4ede95e 151 PANTHER PTHR24567:SF36 1 129 1.6E-21 T 14-09-2016 AMK01_RS20385 d3661ad02e50de713dbe38e9c4ede95e 151 SMART SM00100 15 136 4.3E-15 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS20385 d3661ad02e50de713dbe38e9c4ede95e 151 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 1.7E-18 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS20385 d3661ad02e50de713dbe38e9c4ede95e 151 SUPERFAMILY SSF51206 9 139 2.75E-29 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AMK01_RS20385 d3661ad02e50de713dbe38e9c4ede95e 151 PANTHER PTHR24567 1 129 1.6E-21 T 14-09-2016 AMK01_RS08620 99ea5aa16306111ce34644754c1ff400 103 Pfam PF08980 Domain of unknown function (DUF1883) 6 93 4.2E-40 T 14-09-2016 IPR015073 Atu1913-like AMK01_RS08620 99ea5aa16306111ce34644754c1ff400 103 Gene3D G3DSA:4.10.1210.10 2 101 5.4E-41 T 14-09-2016 IPR015073 Atu1913-like AMK01_RS08620 99ea5aa16306111ce34644754c1ff400 103 SUPERFAMILY SSF141099 4 102 1.7E-36 T 14-09-2016 IPR015073 Atu1913-like AMK01_RS03265 18fb919a73ae1219b8f3095cadc624df 381 SMART SM00710 189 210 130.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS03265 18fb919a73ae1219b8f3095cadc624df 381 SMART SM00710 159 187 6500.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS03265 18fb919a73ae1219b8f3095cadc624df 381 SMART SM00710 32 53 8700.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS03265 18fb919a73ae1219b8f3095cadc624df 381 SMART SM00710 54 76 36.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS03265 18fb919a73ae1219b8f3095cadc624df 381 SMART SM00710 219 240 2700.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS03265 18fb919a73ae1219b8f3095cadc624df 381 SUPERFAMILY SSF51126 18 316 6.01E-33 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS03265 18fb919a73ae1219b8f3095cadc624df 381 Pfam PF13229 Right handed beta helix region 20 120 1.4E-9 T 14-09-2016 AMK01_RS03265 18fb919a73ae1219b8f3095cadc624df 381 Gene3D G3DSA:2.160.20.10 18 266 2.3E-13 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 Pfam PF03471 Transporter associated domain 347 424 9.6E-24 T 14-09-2016 IPR005170 Transporter-associated domain AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 Pfam PF01595 Domain of unknown function DUF21 7 198 6.5E-45 T 14-09-2016 IPR002550 Domain of unknown function DUF21 AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 PANTHER PTHR22777 1 426 1.2E-161 T 14-09-2016 AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 SMART SM01091 346 425 3.2E-31 T 14-09-2016 IPR005170 Transporter-associated domain AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 PANTHER PTHR22777:SF8 1 426 1.2E-161 T 14-09-2016 AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 SUPERFAMILY SSF56176 345 423 1.42E-24 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 SUPERFAMILY SSF54631 201 333 1.34E-24 T 14-09-2016 AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 Gene3D G3DSA:3.30.465.10 341 423 7.7E-28 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 SMART SM00116 284 332 0.24 T 14-09-2016 IPR000644 CBS domain AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 SMART SM00116 222 271 13.0 T 14-09-2016 IPR000644 CBS domain AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 Gene3D G3DSA:3.10.580.10 199 337 3.2E-17 T 14-09-2016 AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 Pfam PF00571 CBS domain 215 267 0.0013 T 14-09-2016 IPR000644 CBS domain AMK01_RS06115 3d800dcaa0d63021b73e3945d2eda37a 426 Pfam PF00571 CBS domain 281 332 4.2E-6 T 14-09-2016 IPR000644 CBS domain AMK01_RS00085 27c6346f650ba51d0a609c2f5ceaea23 280 SUPERFAMILY SSF56529 60 276 1.96E-81 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS00085 27c6346f650ba51d0a609c2f5ceaea23 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 71 275 5.4E-71 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS00085 27c6346f650ba51d0a609c2f5ceaea23 280 PANTHER PTHR11820 1 280 4.5E-161 T 14-09-2016 AMK01_RS00085 27c6346f650ba51d0a609c2f5ceaea23 280 PANTHER PTHR11820:SF71 1 280 4.5E-161 T 14-09-2016 AMK01_RS00085 27c6346f650ba51d0a609c2f5ceaea23 280 Gene3D G3DSA:3.90.850.10 66 278 1.4E-87 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 SUPERFAMILY SSF55021 109 188 9.84E-25 T 14-09-2016 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 Gene3D G3DSA:3.30.70.1150 112 188 3.5E-28 T 14-09-2016 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 Pfam PF10369 Small subunit of acetolactate synthase 113 186 5.3E-25 T 14-09-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 SUPERFAMILY SSF55021 24 98 7.4E-19 T 14-09-2016 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 23 98 4.0E-35 T 14-09-2016 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 Gene3D G3DSA:3.30.70.260 22 99 2.7E-33 T 14-09-2016 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 Pfam PF01842 ACT domain 24 88 3.9E-13 T 14-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 23 186 7.5E-51 T 14-09-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS14305 baaedae798cf734b3136d93b3b198576 190 PANTHER PTHR30239 24 190 9.4E-69 T 14-09-2016 AMK01_RS18430 73c2d8822907e0f19a498d5dd494b09e 293 Pfam PF05013 N-formylglutamate amidohydrolase 21 251 6.0E-68 T 14-09-2016 IPR007709 N-formylglutamate amidohydrolase AMK01_RS18430 73c2d8822907e0f19a498d5dd494b09e 293 Gene3D G3DSA:3.40.630.40 8 283 2.9E-95 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK01_RS18430 73c2d8822907e0f19a498d5dd494b09e 293 SUPERFAMILY SSF53187 10 281 8.48E-83 T 14-09-2016 AMK01_RS07590 4ff5116a5347330e7d5d99b409017ee3 237 Gene3D G3DSA:1.10.8.60 168 228 6.0E-9 T 14-09-2016 AMK01_RS07590 4ff5116a5347330e7d5d99b409017ee3 237 SUPERFAMILY SSF52540 36 216 1.7E-15 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07590 4ff5116a5347330e7d5d99b409017ee3 237 Gene3D G3DSA:3.40.50.300 8 158 1.2E-21 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07590 4ff5116a5347330e7d5d99b409017ee3 237 Pfam PF00308 Bacterial dnaA protein 112 206 1.0E-5 T 14-09-2016 IPR013317 Chromosomal replication initiator protein DnaA AMK01_RS07590 4ff5116a5347330e7d5d99b409017ee3 237 PANTHER PTHR30050:SF5 15 229 3.3E-27 T 14-09-2016 AMK01_RS07590 4ff5116a5347330e7d5d99b409017ee3 237 PANTHER PTHR30050 15 229 3.3E-27 T 14-09-2016 AMK01_RS06485 52cf41cc61750ed1a5eac22e34c1f06e 186 SUPERFAMILY SSF46689 1 72 6.14E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06485 52cf41cc61750ed1a5eac22e34c1f06e 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 3.9E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS06485 52cf41cc61750ed1a5eac22e34c1f06e 186 Gene3D G3DSA:1.10.357.10 9 183 1.1E-19 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 PANTHER PTHR30579:SF0 9 299 7.2E-63 T 14-09-2016 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 73 2.9E-21 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 Pfam PF03466 LysR substrate binding domain 97 289 2.5E-25 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 SUPERFAMILY SSF53850 97 293 1.71E-24 T 14-09-2016 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 4.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 4.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 4.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 Gene3D G3DSA:3.40.190.10 97 181 1.3E-15 T 14-09-2016 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 SUPERFAMILY SSF46785 11 120 1.88E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 PANTHER PTHR30579 9 299 7.2E-63 T 14-09-2016 AMK01_RS12780 c6eb4daf0310ba59729528fcc4dcd5d2 299 Gene3D G3DSA:1.10.10.10 15 91 2.1E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13305 34752bd192a48642e3a979f6ca2c81d7 258 Pfam PF09992 Phosphodiester glycosidase 81 240 6.4E-16 T 14-09-2016 IPR018711 Phosphodiester glycosidase AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 SUPERFAMILY SSF52518 382 596 3.94E-25 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 ProSitePatterns PS60003 Phosphoketolase signature 2. 160 178 - T 14-09-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 Pfam PF09363 XFP C-terminal domain 590 792 2.3E-91 T 14-09-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 Pfam PF09364 XFP N-terminal domain 11 389 6.4E-194 T 14-09-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 Gene3D G3DSA:3.40.50.970 12 367 3.1E-21 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 SUPERFAMILY SSF52518 14 373 4.07E-75 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 ProSitePatterns PS60002 Phosphoketolase signature 1. 147 153 - T 14-09-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 PANTHER PTHR31273 10 795 0.0 T 14-09-2016 AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 PANTHER PTHR31273:SF0 10 795 0.0 T 14-09-2016 AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 PIRSF PIRSF017245 1 794 0.0 T 14-09-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 Hamap MF_01403 Probable phosphoketolase. 8 794 41.417 T 14-09-2016 IPR023962 Probable phosphoketolase AMK01_RS17765 9b6710f8c723a00dd2592a482226dc26 795 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 403 578 8.6E-89 T 14-09-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 AMK01_RS10460 853e740d25ff79ac4c57b65a71fa90fe 275 PANTHER PTHR24220 21 237 3.3E-90 T 14-09-2016 AMK01_RS10460 853e740d25ff79ac4c57b65a71fa90fe 275 Pfam PF00005 ABC transporter 36 179 1.1E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10460 853e740d25ff79ac4c57b65a71fa90fe 275 SUPERFAMILY SSF52540 20 234 5.32E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10460 853e740d25ff79ac4c57b65a71fa90fe 275 PANTHER PTHR24220:SF589 21 237 3.3E-90 T 14-09-2016 AMK01_RS10460 853e740d25ff79ac4c57b65a71fa90fe 275 Gene3D G3DSA:3.40.50.300 13 250 4.3E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10460 853e740d25ff79ac4c57b65a71fa90fe 275 SMART SM00382 45 228 5.8E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10460 853e740d25ff79ac4c57b65a71fa90fe 275 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 PIRSF PIRSF000139 5 429 4.3E-139 T 14-09-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 PANTHER PTHR32479 14 421 1.2E-130 T 14-09-2016 AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 PANTHER PTHR32479:SF2 14 421 1.2E-130 T 14-09-2016 AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 Pfam PF12838 4Fe-4S dicluster domain 24 90 7.2E-12 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 Gene3D G3DSA:1.10.1060.10 13 110 8.6E-23 T 14-09-2016 AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 Pfam PF02754 Cysteine-rich domain 188 275 2.4E-11 T 14-09-2016 IPR004017 Cysteine-rich domain AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 Pfam PF02754 Cysteine-rich domain 320 403 1.7E-14 T 14-09-2016 IPR004017 Cysteine-rich domain AMK01_RS04140 22a7aad097609062caf185f709fb9fe4 436 SUPERFAMILY SSF54862 21 115 4.18E-21 T 14-09-2016 AMK01_RS11095 a7f675ee4d5279bf2dcedf2d2d2bfbd7 114 Gene3D G3DSA:1.10.357.10 1 110 2.7E-17 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS11095 a7f675ee4d5279bf2dcedf2d2d2bfbd7 114 SUPERFAMILY SSF48498 1 110 1.89E-18 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS11095 a7f675ee4d5279bf2dcedf2d2d2bfbd7 114 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 1 110 3.8E-8 T 14-09-2016 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AMK01_RS06355 78c7e99d39674d5fffdb1dd39814538b 233 PANTHER PTHR14136 48 207 1.6E-20 T 14-09-2016 AMK01_RS06355 78c7e99d39674d5fffdb1dd39814538b 233 SUPERFAMILY SSF141571 33 176 7.06E-32 T 14-09-2016 AMK01_RS06355 78c7e99d39674d5fffdb1dd39814538b 233 Pfam PF00805 Pentapeptide repeats (8 copies) 51 90 4.0E-9 T 14-09-2016 IPR001646 Pentapeptide repeat AMK01_RS06355 78c7e99d39674d5fffdb1dd39814538b 233 Pfam PF00805 Pentapeptide repeats (8 copies) 131 169 9.5E-11 T 14-09-2016 IPR001646 Pentapeptide repeat AMK01_RS04345 df2aafdbbdfcf7008e27566cac302bd2 201 Pfam PF05239 PRC-barrel domain 86 147 1.6E-15 T 14-09-2016 IPR027275 PRC-barrel domain AMK01_RS04345 df2aafdbbdfcf7008e27566cac302bd2 201 PANTHER PTHR36505 72 174 3.6E-22 T 14-09-2016 AMK01_RS04345 df2aafdbbdfcf7008e27566cac302bd2 201 SUPERFAMILY SSF50346 88 147 3.73E-13 T 14-09-2016 IPR011033 PRC-barrel-like AMK01_RS04345 df2aafdbbdfcf7008e27566cac302bd2 201 PANTHER PTHR36505:SF2 72 174 3.6E-22 T 14-09-2016 AMK01_RS04345 df2aafdbbdfcf7008e27566cac302bd2 201 Gene3D G3DSA:2.30.30.240 89 146 1.0E-11 T 14-09-2016 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 SUPERFAMILY SSF51569 13 301 6.91E-66 T 14-09-2016 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 Pfam PF00701 Dihydrodipicolinate synthetase family 13 299 1.2E-54 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 Gene3D G3DSA:3.20.20.70 13 300 1.5E-73 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 PANTHER PTHR12128 1 298 5.4E-134 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 PANTHER PTHR12128:SF19 1 298 5.4E-134 T 14-09-2016 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 PIRSF PIRSF001365 8 308 6.5E-58 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 4 299 3.4E-145 T 14-09-2016 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501|UniPathway: UPA00564 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 5 302 52.711 T 14-09-2016 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501|UniPathway: UPA00564 AMK01_RS10550 9ecd1ffb419311f8184644a152b2d1b8 308 SMART SM01130 11 301 3.6E-74 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS06215 61ec546a618a41d6b6d811fc5e706cf2 211 Pfam PF01810 LysE type translocator 18 200 3.5E-24 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS06215 61ec546a618a41d6b6d811fc5e706cf2 211 PANTHER PTHR30086 2 209 1.7E-36 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS06215 61ec546a618a41d6b6d811fc5e706cf2 211 PIRSF PIRSF006324 1 207 1.6E-41 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS17625 5faf6418b62c8a2e7656f5c5366c7590 478 SUPERFAMILY SSF56954 3 459 2.09E-105 T 14-09-2016 AMK01_RS17625 5faf6418b62c8a2e7656f5c5366c7590 478 Gene3D G3DSA:1.20.1600.10 48 459 1.9E-102 T 14-09-2016 AMK01_RS17625 5faf6418b62c8a2e7656f5c5366c7590 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 458 4.0E-138 T 14-09-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AMK01_RS17625 5faf6418b62c8a2e7656f5c5366c7590 478 Pfam PF02321 Outer membrane efflux protein 63 247 5.1E-27 T 14-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMK01_RS17625 5faf6418b62c8a2e7656f5c5366c7590 478 Pfam PF02321 Outer membrane efflux protein 279 456 1.1E-33 T 14-09-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMK01_RS17625 5faf6418b62c8a2e7656f5c5366c7590 478 PANTHER PTHR30203:SF3 1 477 5.6E-94 T 14-09-2016 AMK01_RS17625 5faf6418b62c8a2e7656f5c5366c7590 478 PANTHER PTHR30203 1 477 5.6E-94 T 14-09-2016 AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.4E-37 T 14-09-2016 IPR027486 Ribosomal protein S10 domain AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.6E-47 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 SUPERFAMILY SSF54999 6 102 4.84E-40 T 14-09-2016 IPR027486 Ribosomal protein S10 domain AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 Gene3D G3DSA:3.30.70.600 4 102 1.0E-45 T 14-09-2016 IPR027486 Ribosomal protein S10 domain AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.699 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-09-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 PANTHER PTHR11700 4 102 2.1E-55 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.8E-19 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.8E-19 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.8E-19 T 14-09-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08445 c492a1c79c5b567e70fa8d0c656baf9d 102 SMART SM01403 7 101 1.4E-59 T 14-09-2016 IPR027486 Ribosomal protein S10 domain AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 PANTHER PTHR28629:SF4 1 536 7.4E-201 T 14-09-2016 AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 SUPERFAMILY SSF101473 358 539 2.75E-48 T 14-09-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 SUPERFAMILY SSF82549 1 325 6.28E-106 T 14-09-2016 AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 SMART SM01120 382 544 1.4E-53 T 14-09-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 Pfam PF02734 DAK2 domain 383 538 1.2E-39 T 14-09-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 Gene3D G3DSA:3.30.1180.20 185 325 5.4E-38 T 14-09-2016 AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 Pfam PF02733 Dak1 domain 36 321 4.4E-100 T 14-09-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 Gene3D G3DSA:3.40.50.10440 11 182 5.2E-66 T 14-09-2016 AMK01_RS12985 7a9d06b25c370970e70df2ff915d022e 546 PANTHER PTHR28629 1 536 7.4E-201 T 14-09-2016 AMK01_RS00260 c95efb9f5f563a7cc64df23f3d9eea5e 315 Pfam PF07182 Protein of unknown function (DUF1402) 18 315 2.2E-159 T 14-09-2016 IPR009842 Protein of unknown function DUF1402 AMK01_RS15950 afce0d943f46577fc9ce64848f7f46cb 594 SUPERFAMILY SSF53335 405 585 4.06E-19 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS15950 afce0d943f46577fc9ce64848f7f46cb 594 Pfam PF12147 Putative methyltransferase 285 593 3.0E-151 T 14-09-2016 IPR022744 Methyltransferase domain, putative AMK01_RS15950 afce0d943f46577fc9ce64848f7f46cb 594 Pfam PF12146 Serine aminopeptidase, S33 42 277 1.9E-67 T 14-09-2016 IPR022742 Serine aminopeptidase, S33 AMK01_RS15950 afce0d943f46577fc9ce64848f7f46cb 594 PANTHER PTHR11614:SF106 15 314 3.9E-171 T 14-09-2016 AMK01_RS15950 afce0d943f46577fc9ce64848f7f46cb 594 Gene3D G3DSA:3.40.50.150 408 585 5.8E-13 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS15950 afce0d943f46577fc9ce64848f7f46cb 594 Gene3D G3DSA:3.40.50.1820 26 290 3.8E-36 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS15950 afce0d943f46577fc9ce64848f7f46cb 594 PANTHER PTHR11614 15 314 3.9E-171 T 14-09-2016 AMK01_RS15950 afce0d943f46577fc9ce64848f7f46cb 594 SUPERFAMILY SSF53474 17 291 6.02E-34 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 PANTHER PTHR11476:SF1 473 497 4.3E-164 T 14-09-2016 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 SUPERFAMILY SSF55681 13 371 6.77E-72 T 14-09-2016 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 Gene3D G3DSA:3.30.930.10 12 209 8.9E-83 T 14-09-2016 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 Gene3D G3DSA:3.30.930.10 272 372 8.9E-83 T 14-09-2016 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 Pfam PF03129 Anticodon binding domain 384 466 1.5E-9 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 SUPERFAMILY SSF52954 381 493 8.83E-18 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 11 491 25.931 T 14-09-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 PANTHER PTHR11476 5 454 4.3E-164 T 14-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 PANTHER PTHR11476 473 497 4.3E-164 T 14-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 Gene3D G3DSA:3.40.50.800 381 492 8.7E-29 T 14-09-2016 IPR004154 Anticodon-binding AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 Pfam PF13393 Histidyl-tRNA synthetase 18 363 1.0E-43 T 14-09-2016 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 15 459 3.0E-114 T 14-09-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 PIRSF PIRSF001549 9 474 3.1E-127 T 14-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK01_RS04200 e6cf6ba511e1b64ca67989c651734f71 523 PANTHER PTHR11476:SF1 5 454 4.3E-164 T 14-09-2016 AMK01_RS03640 43511ca39f4cbd9ee6a86ac0f6b0ca45 250 PANTHER PTHR30065 1 247 4.8E-32 T 14-09-2016 AMK01_RS03640 43511ca39f4cbd9ee6a86ac0f6b0ca45 250 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 244 6.8E-51 T 14-09-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AMK01_RS03640 43511ca39f4cbd9ee6a86ac0f6b0ca45 250 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 18 39 4.9E-13 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK01_RS03640 43511ca39f4cbd9ee6a86ac0f6b0ca45 250 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 4.9E-13 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK01_RS03640 43511ca39f4cbd9ee6a86ac0f6b0ca45 250 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 4.9E-13 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK01_RS03640 43511ca39f4cbd9ee6a86ac0f6b0ca45 250 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 4.9E-13 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK01_RS03640 43511ca39f4cbd9ee6a86ac0f6b0ca45 250 Pfam PF01311 Bacterial export proteins, family 1 10 244 2.8E-52 T 14-09-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AMK01_RS05705 3abfabf8338efb5d0299d363d21491ae 273 Gene3D G3DSA:2.60.120.620 30 220 4.6E-21 T 14-09-2016 AMK01_RS05705 3abfabf8338efb5d0299d363d21491ae 273 PANTHER PTHR21308 131 223 9.3E-13 T 14-09-2016 AMK01_RS05705 3abfabf8338efb5d0299d363d21491ae 273 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 30 217 2.0E-20 T 14-09-2016 IPR008775 Phytanoyl-CoA dioxygenase AMK01_RS05705 3abfabf8338efb5d0299d363d21491ae 273 SUPERFAMILY SSF51197 30 258 8.15E-35 T 14-09-2016 AMK01_RS04045 a889c2a46e4c35a02c083c858c26aa93 517 SUPERFAMILY SSF53067 313 501 4.24E-39 T 14-09-2016 AMK01_RS04045 a889c2a46e4c35a02c083c858c26aa93 517 SUPERFAMILY SSF53067 186 308 1.08E-35 T 14-09-2016 AMK01_RS04045 a889c2a46e4c35a02c083c858c26aa93 517 Pfam PF02541 Ppx/GppA phosphatase family 207 500 1.5E-44 T 14-09-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 AMK01_RS04045 a889c2a46e4c35a02c083c858c26aa93 517 PANTHER PTHR30005 160 510 4.2E-82 T 14-09-2016 AMK01_RS04045 a889c2a46e4c35a02c083c858c26aa93 517 Gene3D G3DSA:3.30.420.40 182 306 1.3E-46 T 14-09-2016 AMK01_RS04045 a889c2a46e4c35a02c083c858c26aa93 517 Gene3D G3DSA:3.30.420.150 311 502 1.1E-53 T 14-09-2016 AMK01_RS13785 94eb603a5d0d5e1b21c8e483a68053de 229 Gene3D G3DSA:3.10.180.10 26 161 1.9E-21 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS13785 94eb603a5d0d5e1b21c8e483a68053de 229 PANTHER PTHR34309 12 176 1.4E-80 T 14-09-2016 AMK01_RS13785 94eb603a5d0d5e1b21c8e483a68053de 229 SUPERFAMILY SSF54593 22 120 1.18E-17 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS13785 94eb603a5d0d5e1b21c8e483a68053de 229 SUPERFAMILY SSF54593 147 165 1.18E-17 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS13785 94eb603a5d0d5e1b21c8e483a68053de 229 PANTHER PTHR34309:SF2 12 176 1.4E-80 T 14-09-2016 AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 Gene3D G3DSA:3.30.70.270 296 455 5.7E-39 T 14-09-2016 AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 SMART SM00267 285 449 2.0E-40 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 294 446 7.7E-26 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 SUPERFAMILY SSF55073 300 451 3.22E-35 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 SMART SM00052 459 699 7.8E-82 T 14-09-2016 IPR001633 EAL domain AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 Pfam PF05228 CHASE4 domain 61 216 4.9E-17 T 14-09-2016 IPR007892 CHASE4 AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 SUPERFAMILY SSF141868 465 706 2.09E-74 T 14-09-2016 IPR001633 EAL domain AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 Pfam PF00563 EAL domain 467 694 1.2E-64 T 14-09-2016 IPR001633 EAL domain AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 PANTHER PTHR33121:SF13 17 25 1.1E-63 T 14-09-2016 AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 Gene3D G3DSA:3.20.20.450 462 707 4.1E-78 T 14-09-2016 IPR001633 EAL domain AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 PANTHER PTHR33121 17 25 1.1E-63 T 14-09-2016 AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 PANTHER PTHR33121:SF13 410 706 1.1E-63 T 14-09-2016 AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 444 8.8E-30 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08005 c7b127522bf88b6a95f3d7b0125c1649 709 PANTHER PTHR33121 410 706 1.1E-63 T 14-09-2016 AMK01_RS15285 927fad5cbb2f7ffddfbdcf8a000f6d08 127 PANTHER PTHR36173:SF2 2 116 2.1E-19 T 14-09-2016 AMK01_RS15285 927fad5cbb2f7ffddfbdcf8a000f6d08 127 SUPERFAMILY SSF88723 1 117 1.18E-12 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS15285 927fad5cbb2f7ffddfbdcf8a000f6d08 127 PANTHER PTHR36173 2 116 2.1E-19 T 14-09-2016 AMK01_RS15285 927fad5cbb2f7ffddfbdcf8a000f6d08 127 Pfam PF01850 PIN domain 4 116 1.5E-6 T 14-09-2016 IPR002716 PIN domain AMK01_RS02535 bf98af6b1cc0acd4a698154cba33f50c 210 PANTHER PTHR10285:SF81 20 203 5.4E-43 T 14-09-2016 AMK01_RS02535 bf98af6b1cc0acd4a698154cba33f50c 210 SUPERFAMILY SSF52540 20 203 4.98E-35 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02535 bf98af6b1cc0acd4a698154cba33f50c 210 Pfam PF03308 ArgK protein 8 58 3.8E-7 T 14-09-2016 AMK01_RS02535 bf98af6b1cc0acd4a698154cba33f50c 210 Gene3D G3DSA:3.40.50.300 15 206 2.9E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02535 bf98af6b1cc0acd4a698154cba33f50c 210 PANTHER PTHR10285 20 203 5.4E-43 T 14-09-2016 AMK01_RS05280 462ba6157e15bf7794dd965400b8f0d3 215 Gene3D G3DSA:2.10.109.10 92 211 2.6E-10 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK01_RS05280 462ba6157e15bf7794dd965400b8f0d3 215 Gene3D G3DSA:1.10.260.40 16 78 9.5E-5 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS05280 462ba6157e15bf7794dd965400b8f0d3 215 SUPERFAMILY SSF51306 91 211 1.41E-12 T 14-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK01_RS10310 6d02c2f81e92be24b4b9437df5c7b8bd 100 Gene3D G3DSA:2.40.50.90 12 87 2.9E-8 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS10310 6d02c2f81e92be24b4b9437df5c7b8bd 100 Pfam PF00565 Staphylococcal nuclease homologue 12 90 7.7E-5 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS10310 6d02c2f81e92be24b4b9437df5c7b8bd 100 SUPERFAMILY SSF50199 11 94 8.24E-10 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS18955 0393c42c9ec1303f6f999871e9ec4593 224 Pfam PF07077 Protein of unknown function (DUF1345) 45 215 8.1E-58 T 14-09-2016 IPR009781 Protein of unknown function DUF1345 AMK01_RS10185 37f918b855560a1ec98ffa98438833d7 368 SUPERFAMILY SSF56219 152 184 1.8E-17 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS10185 37f918b855560a1ec98ffa98438833d7 368 SUPERFAMILY SSF56219 24 123 1.8E-17 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS10185 37f918b855560a1ec98ffa98438833d7 368 SUPERFAMILY SSF56219 226 263 1.8E-17 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS10185 37f918b855560a1ec98ffa98438833d7 368 SUPERFAMILY SSF56219 306 362 1.8E-17 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS10185 37f918b855560a1ec98ffa98438833d7 368 Gene3D G3DSA:3.60.10.10 21 119 7.3E-12 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS10185 37f918b855560a1ec98ffa98438833d7 368 Gene3D G3DSA:3.60.10.10 154 187 7.3E-12 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS10185 37f918b855560a1ec98ffa98438833d7 368 Gene3D G3DSA:3.60.10.10 227 362 7.3E-12 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS10185 37f918b855560a1ec98ffa98438833d7 368 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 27 357 1.5E-9 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS16215 ea92e2d0e89a13ad62f988fb4bbc9f5c 215 SMART SM00421 145 202 0.0013 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS16215 ea92e2d0e89a13ad62f988fb4bbc9f5c 215 SUPERFAMILY SSF46894 154 207 2.79E-9 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS16215 ea92e2d0e89a13ad62f988fb4bbc9f5c 215 Gene3D G3DSA:1.10.10.10 155 207 4.8E-10 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16215 ea92e2d0e89a13ad62f988fb4bbc9f5c 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 201 3.6E-6 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS15560 3b87e6cd9418d78483f59102732fc020 336 Gene3D G3DSA:1.10.8.300 220 333 6.7E-30 T 14-09-2016 AMK01_RS15560 3b87e6cd9418d78483f59102732fc020 336 PANTHER PTHR11603:SF156 3 327 7.5E-114 T 14-09-2016 AMK01_RS15560 3b87e6cd9418d78483f59102732fc020 336 SUPERFAMILY SSF52540 26 309 6.98E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15560 3b87e6cd9418d78483f59102732fc020 336 PANTHER PTHR11603 3 327 7.5E-114 T 14-09-2016 AMK01_RS15560 3b87e6cd9418d78483f59102732fc020 336 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 56 189 2.5E-59 T 14-09-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMK01_RS15560 3b87e6cd9418d78483f59102732fc020 336 Gene3D G3DSA:3.40.50.300 38 205 1.4E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15560 3b87e6cd9418d78483f59102732fc020 336 PIRSF PIRSF002849 2 335 1.7E-113 T 14-09-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted AMK01_RS03795 fabd460817d5e215e6f3d9646673f53d 272 PANTHER PTHR30222 3 257 3.2E-83 T 14-09-2016 AMK01_RS03795 fabd460817d5e215e6f3d9646673f53d 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 254 1.7E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03795 fabd460817d5e215e6f3d9646673f53d 272 Gene3D G3DSA:1.10.3720.10 7 260 4.4E-59 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03795 fabd460817d5e215e6f3d9646673f53d 272 SUPERFAMILY SSF161098 4 258 1.03E-53 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03795 fabd460817d5e215e6f3d9646673f53d 272 PANTHER PTHR30222:SF6 3 257 3.2E-83 T 14-09-2016 AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 135 9.7E-33 T 14-09-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 SUPERFAMILY SSF56112 156 492 1.2E-42 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 PIRSF PIRSF036599 1 503 3.9E-235 T 14-09-2016 IPR012180 Predicted bifunctional ATPase/phosphotransferase AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 Gene3D G3DSA:3.30.200.20 151 257 3.7E-23 T 14-09-2016 AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 143 4.6E-32 T 14-09-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 PANTHER PTHR33540 4 207 4.1E-48 T 14-09-2016 AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 SUPERFAMILY SSF52540 17 115 7.31E-17 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 Pfam PF01636 Phosphotransferase enzyme family 170 422 1.6E-25 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 Gene3D G3DSA:3.40.50.300 7 150 1.7E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00150 3f7a9ba57ca0502555010e8f6731ad75 503 Gene3D G3DSA:3.90.1200.10 261 496 4.7E-56 T 14-09-2016 AMK01_RS16645 541d9c94a825ab4a9d622f3df628616f 231 PANTHER PTHR30383 8 152 2.8E-13 T 14-09-2016 AMK01_RS16645 541d9c94a825ab4a9d622f3df628616f 231 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 48 209 4.0E-15 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS16645 541d9c94a825ab4a9d622f3df628616f 231 SUPERFAMILY SSF52266 43 211 6.66E-29 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS16645 541d9c94a825ab4a9d622f3df628616f 231 Gene3D G3DSA:3.40.50.1110 44 221 1.2E-26 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS16645 541d9c94a825ab4a9d622f3df628616f 231 PANTHER PTHR30383:SF5 8 152 2.8E-13 T 14-09-2016 AMK01_RS01310 f4f2ae95c42af5569df8d2b839129902 180 Gene3D G3DSA:2.60.120.10 1 173 3.7E-63 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS01310 f4f2ae95c42af5569df8d2b839129902 180 SUPERFAMILY SSF51182 1 173 2.16E-58 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS01310 f4f2ae95c42af5569df8d2b839129902 180 PANTHER PTHR21047 1 170 3.5E-50 T 14-09-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMK01_RS01310 f4f2ae95c42af5569df8d2b839129902 180 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 169 8.0E-48 T 14-09-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMK01_RS01310 f4f2ae95c42af5569df8d2b839129902 180 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 173 2.2E-57 T 14-09-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMK01_RS06755 6a2128527e4805c88f64eece2ee208ee 119 Gene3D G3DSA:3.30.70.1060 1 112 1.3E-32 T 14-09-2016 AMK01_RS06755 6a2128527e4805c88f64eece2ee208ee 119 PANTHER PTHR35174 2 113 2.3E-23 T 14-09-2016 AMK01_RS06755 6a2128527e4805c88f64eece2ee208ee 119 SUPERFAMILY SSF54909 1 114 1.47E-28 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS06755 6a2128527e4805c88f64eece2ee208ee 119 PANTHER PTHR35174:SF3 2 113 2.3E-23 T 14-09-2016 AMK01_RS06755 6a2128527e4805c88f64eece2ee208ee 119 Pfam PF03795 YCII-related domain 1 113 6.9E-22 T 14-09-2016 IPR005545 YCII-related AMK01_RS16030 4c802fc07f3a934e86b1893146a87275 461 Gene3D G3DSA:1.20.1250.20 259 456 1.1E-22 T 14-09-2016 AMK01_RS16030 4c802fc07f3a934e86b1893146a87275 461 SUPERFAMILY SSF103473 22 458 2.62E-83 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS16030 4c802fc07f3a934e86b1893146a87275 461 PANTHER PTHR24064 32 460 3.4E-86 T 14-09-2016 AMK01_RS16030 4c802fc07f3a934e86b1893146a87275 461 Gene3D G3DSA:1.20.1250.20 41 220 1.1E-30 T 14-09-2016 AMK01_RS16030 4c802fc07f3a934e86b1893146a87275 461 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 14-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMK01_RS16030 4c802fc07f3a934e86b1893146a87275 461 Pfam PF00083 Sugar (and other) transporter 69 459 6.5E-51 T 14-09-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 TIGRFAM TIGR03788 marine_srt_targ: marine proteobacterial sortase target protein 83 779 3.8E-282 T 14-09-2016 IPR022440 Conserved hypothetical protein CHP03788 AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 PANTHER PTHR10338 85 683 4.9E-135 T 14-09-2016 AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 Pfam PF08487 Vault protein inter-alpha-trypsin domain 85 192 3.0E-33 T 14-09-2016 IPR013694 VIT domain AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 SMART SM00609 77 194 5.5E-6 T 14-09-2016 IPR013694 VIT domain AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 SUPERFAMILY SSF53300 353 518 1.32E-30 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 SMART SM00327 352 527 1.1E-21 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 Gene3D G3DSA:3.40.50.410 352 518 1.8E-17 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 PANTHER PTHR10338:SF95 85 683 4.9E-135 T 14-09-2016 AMK01_RS15300 63f78e9d53e19b84cc86cbd8cca8e506 793 Pfam PF13768 von Willebrand factor type A domain 354 506 5.4E-24 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 SUPERFAMILY SSF58104 228 262 3.01E-61 T 14-09-2016 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 SUPERFAMILY SSF58104 320 534 3.01E-61 T 14-09-2016 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 532 4.9E-36 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 SMART SM00283 300 533 1.4E-62 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 Gene3D G3DSA:1.10.287.950 309 505 1.1E-40 T 14-09-2016 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 SMART SM00304 208 260 8.3E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 181 1.0E-7 T 14-09-2016 IPR024478 4HB MCP domain AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 PANTHER PTHR32089 152 242 2.8E-98 T 14-09-2016 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 PANTHER PTHR32089 282 536 2.8E-98 T 14-09-2016 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 1.1E-27 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 1.1E-27 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 1.1E-27 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 1.1E-27 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS18160 f7de21dbe1a032ee76411223f47a75ed 602 Pfam PF00672 HAMP domain 189 256 6.0E-9 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS11805 d873d362556785ed9feb9a6bd2b023bf 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 386 7.7E-76 T 14-09-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AMK01_RS11805 d873d362556785ed9feb9a6bd2b023bf 401 PANTHER PTHR23502:SF19 3 392 1.9E-104 T 14-09-2016 AMK01_RS11805 d873d362556785ed9feb9a6bd2b023bf 401 PANTHER PTHR23502 3 392 1.9E-104 T 14-09-2016 AMK01_RS11805 d873d362556785ed9feb9a6bd2b023bf 401 Gene3D G3DSA:1.20.1250.20 7 187 1.6E-25 T 14-09-2016 AMK01_RS11805 d873d362556785ed9feb9a6bd2b023bf 401 SUPERFAMILY SSF103473 6 386 1.24E-52 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS11805 d873d362556785ed9feb9a6bd2b023bf 401 Pfam PF07690 Major Facilitator Superfamily 11 355 1.3E-35 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 Gene3D G3DSA:1.20.140.10 214 368 6.9E-20 T 14-09-2016 AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 PANTHER PTHR10909:SF300 7 353 2.6E-56 T 14-09-2016 AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 Gene3D G3DSA:2.40.110.10 143 213 2.4E-10 T 14-09-2016 AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 SUPERFAMILY SSF56645 28 220 4.93E-24 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 PANTHER PTHR10909 7 353 2.6E-56 T 14-09-2016 AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 PIRSF PIRSF016578 10 355 5.3E-24 T 14-09-2016 AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 240 351 4.5E-5 T 14-09-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 SUPERFAMILY SSF47203 233 357 5.14E-10 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS17290 6a990bc7229a248bb7250b05e43f0577 370 Gene3D G3DSA:1.10.540.10 12 117 1.9E-21 T 14-09-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK01_RS03855 677b8969bf00039bf5a2e24915b3a92e 531 PANTHER PTHR30290 1 531 2.6E-189 T 14-09-2016 AMK01_RS03855 677b8969bf00039bf5a2e24915b3a92e 531 PIRSF PIRSF002741 9 531 1.2E-109 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK01_RS03855 677b8969bf00039bf5a2e24915b3a92e 531 Gene3D G3DSA:3.90.76.10 34 215 1.0E-46 T 14-09-2016 AMK01_RS03855 677b8969bf00039bf5a2e24915b3a92e 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 449 1.2E-93 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS03855 677b8969bf00039bf5a2e24915b3a92e 531 SUPERFAMILY SSF53850 24 527 1.48E-144 T 14-09-2016 AMK01_RS03855 677b8969bf00039bf5a2e24915b3a92e 531 PANTHER PTHR30290:SF14 1 531 2.6E-189 T 14-09-2016 AMK01_RS03855 677b8969bf00039bf5a2e24915b3a92e 531 Gene3D G3DSA:3.10.105.10 286 498 2.2E-57 T 14-09-2016 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 PANTHER PTHR12383 81 247 1.5E-76 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 PANTHER PTHR12383 7 64 1.5E-76 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 PANTHER PTHR12383:SF27 81 247 1.5E-76 T 14-09-2016 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 PANTHER PTHR12383:SF27 7 64 1.5E-76 T 14-09-2016 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 ProSitePatterns PS00501 Signal peptidases I serine active site. 41 48 - T 14-09-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 SUPERFAMILY SSF51306 30 245 4.45E-69 T 14-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 102 114 2.6E-24 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 32 48 2.6E-24 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 180 199 2.6E-24 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 ProSitePatterns PS00761 Signal peptidases I signature 3. 185 198 - T 14-09-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 Gene3D G3DSA:2.10.109.10 28 112 5.1E-51 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 Gene3D G3DSA:2.10.109.10 180 233 5.1E-51 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 Pfam PF00717 Peptidase S24-like 38 126 2.3E-24 T 14-09-2016 IPR019759 Peptidase S24/S26A/S26B AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 Pfam PF10502 Signal peptidase, peptidase S26 177 217 1.4E-5 T 14-09-2016 IPR019533 Peptidase S26 AMK01_RS07090 c52249f0c5ec6e3116c6ac10a07a8c65 247 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 16 221 9.9E-54 T 14-09-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK01_RS19940 33205d10ac06b8d43deb9bebad6cb211 316 Pfam PF01553 Acyltransferase 91 222 3.3E-12 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK01_RS19940 33205d10ac06b8d43deb9bebad6cb211 316 PANTHER PTHR37323:SF1 1 293 8.3E-16 T 14-09-2016 AMK01_RS19940 33205d10ac06b8d43deb9bebad6cb211 316 SMART SM00563 103 225 1.4E-5 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK01_RS19940 33205d10ac06b8d43deb9bebad6cb211 316 PANTHER PTHR37323 1 293 8.3E-16 T 14-09-2016 AMK01_RS19940 33205d10ac06b8d43deb9bebad6cb211 316 SUPERFAMILY SSF69593 82 226 2.75E-10 T 14-09-2016 AMK01_RS19940 33205d10ac06b8d43deb9bebad6cb211 316 Gene3D G3DSA:3.40.1130.10 80 223 5.1E-5 T 14-09-2016 AMK01_RS12725 40519cd97fc88d9b349dead546db54c0 261 PANTHER PTHR30269:SF0 4 256 4.2E-79 T 14-09-2016 AMK01_RS12725 40519cd97fc88d9b349dead546db54c0 261 PANTHER PTHR30269 4 256 4.2E-79 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS12725 40519cd97fc88d9b349dead546db54c0 261 Pfam PF01925 Sulfite exporter TauE/SafE 13 247 1.0E-44 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 SUPERFAMILY SSF46785 7 101 3.76E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 Pfam PF12840 Helix-turn-helix domain 10 68 4.3E-14 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 2.9E-8 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 2.9E-8 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 2.9E-8 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 PANTHER PTHR38600 2 109 2.4E-18 T 14-09-2016 AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 PANTHER PTHR38600:SF1 2 109 2.4E-18 T 14-09-2016 AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 SMART SM00418 10 91 1.1E-13 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS12390 a0db5feb1d12feec86d663362598b832 113 Gene3D G3DSA:1.10.10.10 3 107 3.4E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09225 aeaaae60984b6ff39909157faa8954af 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 13 210 1.4E-39 T 14-09-2016 AMK01_RS09225 aeaaae60984b6ff39909157faa8954af 217 PANTHER PTHR11579 1 210 1.0E-34 T 14-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMK01_RS09225 aeaaae60984b6ff39909157faa8954af 217 Gene3D G3DSA:3.40.50.150 18 211 5.7E-42 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS09225 aeaaae60984b6ff39909157faa8954af 217 SUPERFAMILY SSF53335 18 212 3.56E-36 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS09225 aeaaae60984b6ff39909157faa8954af 217 PANTHER PTHR11579:SF0 1 210 1.0E-34 T 14-09-2016 AMK01_RS07740 58d5851d1cb2b5238c4939540c8fba93 177 PANTHER PTHR12184 27 134 1.7E-25 T 14-09-2016 IPR007129 Ubiquinol-cytochrome c chaperone, CBP3 AMK01_RS07740 58d5851d1cb2b5238c4939540c8fba93 177 PIRSF PIRSF032079 1 177 1.2E-73 T 14-09-2016 IPR014569 Ubiquinol-cytochrome c chaperone, CBP3-related AMK01_RS07740 58d5851d1cb2b5238c4939540c8fba93 177 Pfam PF03981 Ubiquinol-cytochrome C chaperone 34 171 8.0E-42 T 14-09-2016 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 AMK01_RS07740 58d5851d1cb2b5238c4939540c8fba93 177 PANTHER PTHR12184:SF2 27 134 1.7E-25 T 14-09-2016 AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 SUPERFAMILY SSF56601 28 287 4.01E-71 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 Gene3D G3DSA:3.30.70.1070 432 513 4.6E-7 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 Gene3D G3DSA:3.40.710.10 34 288 7.0E-83 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 161 174 1.0E-9 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 151 1.0E-9 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 81 92 1.0E-9 T 14-09-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 Pfam PF05036 Sporulation related domain 436 514 3.6E-12 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 57 273 1.6E-54 T 14-09-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 PANTHER PTHR21581 59 287 6.0E-60 T 14-09-2016 AMK01_RS11330 d35530f295e911606f64a2e8aecf4a5c 517 SUPERFAMILY SSF110997 435 513 8.5E-7 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AMK01_RS12305 973d27143f725b61458e99233fca47ec 131 Pfam PF07883 Cupin domain 42 102 1.3E-10 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS12305 973d27143f725b61458e99233fca47ec 131 PANTHER PTHR33570:SF5 1 130 6.7E-58 T 14-09-2016 AMK01_RS12305 973d27143f725b61458e99233fca47ec 131 SUPERFAMILY SSF51182 6 130 2.49E-31 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS12305 973d27143f725b61458e99233fca47ec 131 Gene3D G3DSA:2.60.120.10 8 129 4.9E-32 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS12305 973d27143f725b61458e99233fca47ec 131 PANTHER PTHR33570 1 130 6.7E-58 T 14-09-2016 AMK01_RS19160 1f78d6b939910c0bc29214351174d46a 419 PANTHER PTHR30061 5 394 9.5E-76 T 14-09-2016 AMK01_RS19160 1f78d6b939910c0bc29214351174d46a 419 SUPERFAMILY SSF53850 27 417 7.24E-54 T 14-09-2016 AMK01_RS19160 1f78d6b939910c0bc29214351174d46a 419 PANTHER PTHR30061:SF22 5 394 9.5E-76 T 14-09-2016 AMK01_RS19160 1f78d6b939910c0bc29214351174d46a 419 Gene3D G3DSA:3.40.190.10 147 334 6.8E-26 T 14-09-2016 AMK01_RS19160 1f78d6b939910c0bc29214351174d46a 419 Pfam PF01547 Bacterial extracellular solute-binding protein 60 317 1.1E-22 T 14-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 SMART SM00387 345 463 1.9E-18 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 PANTHER PTHR24423 391 460 7.7E-37 T 14-09-2016 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 PANTHER PTHR24423:SF496 391 460 7.7E-37 T 14-09-2016 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 SMART SM00388 245 302 0.001 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 PANTHER PTHR24423 1 8 7.7E-37 T 14-09-2016 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 Gene3D G3DSA:3.30.565.10 309 460 1.5E-23 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 452 8.1E-10 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 SUPERFAMILY SSF47384 228 301 2.16E-5 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 PANTHER PTHR24423 187 374 7.7E-37 T 14-09-2016 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 4.7E-7 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 4.7E-7 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 SUPERFAMILY SSF55874 308 462 4.06E-22 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 PANTHER PTHR24423:SF496 187 374 7.7E-37 T 14-09-2016 AMK01_RS06570 0503b78573f6e91a15a15d3ed11b7587 467 PANTHER PTHR24423:SF496 1 8 7.7E-37 T 14-09-2016 AMK01_RS00220 829b30b66048b443c2340d279c79a84a 248 PANTHER PTHR21235 1 248 1.1E-99 T 14-09-2016 AMK01_RS00220 829b30b66048b443c2340d279c79a84a 248 Gene3D G3DSA:3.20.20.70 1 239 2.1E-83 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS00220 829b30b66048b443c2340d279c79a84a 248 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 4 235 2.0E-78 T 14-09-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 AMK01_RS00220 829b30b66048b443c2340d279c79a84a 248 SUPERFAMILY SSF51366 1 238 5.1E-72 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK01_RS00220 829b30b66048b443c2340d279c79a84a 248 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 35.242 T 14-09-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 AMK01_RS00220 829b30b66048b443c2340d279c79a84a 248 PANTHER PTHR21235:SF15 1 248 1.1E-99 T 14-09-2016 AMK01_RS00220 829b30b66048b443c2340d279c79a84a 248 Pfam PF00977 Histidine biosynthesis protein 3 230 3.6E-77 T 14-09-2016 IPR006062 Histidine biosynthesis GO:0000105 AMK01_RS19205 ee4c84fff1f7997e84db2a3b16db5dc0 73 PANTHER PTHR34386:SF3 1 72 7.2E-31 T 14-09-2016 AMK01_RS19205 ee4c84fff1f7997e84db2a3b16db5dc0 73 Pfam PF00462 Glutaredoxin 3 61 2.2E-15 T 14-09-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMK01_RS19205 ee4c84fff1f7997e84db2a3b16db5dc0 73 Gene3D G3DSA:3.40.30.10 1 72 1.9E-27 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19205 ee4c84fff1f7997e84db2a3b16db5dc0 73 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 1.6E-29 T 14-09-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 AMK01_RS19205 ee4c84fff1f7997e84db2a3b16db5dc0 73 SUPERFAMILY SSF52833 1 71 3.12E-21 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19205 ee4c84fff1f7997e84db2a3b16db5dc0 73 PANTHER PTHR34386 1 72 7.2E-31 T 14-09-2016 AMK01_RS18335 300daad0050c0d206aceb548d8efc06b 483 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 16 160 6.3E-36 T 14-09-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMK01_RS18335 300daad0050c0d206aceb548d8efc06b 483 Gene3D G3DSA:3.40.50.720 2 173 2.1E-73 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18335 300daad0050c0d206aceb548d8efc06b 483 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 164 451 2.6E-27 T 14-09-2016 IPR032095 Saccharopine dehydrogenase, C-terminal AMK01_RS18335 300daad0050c0d206aceb548d8efc06b 483 Gene3D G3DSA:3.30.360.30 174 483 2.3E-150 T 14-09-2016 IPR023181 Homospermidine synthase-like, domain KEGG: 00960+2.5.1.44 AMK01_RS07640 723ca80ab8a95261539caa9b3d190cad 152 SUPERFAMILY SSF55961 3 146 7.13E-32 T 14-09-2016 AMK01_RS07640 723ca80ab8a95261539caa9b3d190cad 152 Gene3D G3DSA:3.30.530.20 4 147 9.3E-35 T 14-09-2016 IPR023393 START-like domain AMK01_RS07640 723ca80ab8a95261539caa9b3d190cad 152 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 143 1.9E-22 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS08275 3bc1665600ead09e74bbca00e63108df 380 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 81 293 3.5E-61 T 14-09-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AMK01_RS08275 3bc1665600ead09e74bbca00e63108df 380 PANTHER PTHR32039:SF8 22 376 2.4E-95 T 14-09-2016 AMK01_RS08275 3bc1665600ead09e74bbca00e63108df 380 PANTHER PTHR32039 22 376 2.4E-95 T 14-09-2016 AMK01_RS08275 3bc1665600ead09e74bbca00e63108df 380 SUPERFAMILY SSF102405 90 294 2.22E-37 T 14-09-2016 AMK01_RS08275 3bc1665600ead09e74bbca00e63108df 380 Gene3D G3DSA:3.40.50.450 119 263 1.7E-7 T 14-09-2016 AMK01_RS08275 3bc1665600ead09e74bbca00e63108df 380 Pfam PF02481 DNA recombination-mediator protein A 83 285 2.2E-67 T 14-09-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AMK01_RS09105 0fe9c0659a4db84a5bb1f0700fe54772 112 Pfam PF13619 KTSC domain 13 61 5.3E-8 T 14-09-2016 IPR025309 KTSC domain AMK01_RS01105 7ff26ecad071f6a9d5583e8715eaca40 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 298 7.7E-38 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS01105 7ff26ecad071f6a9d5583e8715eaca40 323 PANTHER PTHR32196:SF40 8 323 8.0E-94 T 14-09-2016 AMK01_RS01105 7ff26ecad071f6a9d5583e8715eaca40 323 PANTHER PTHR32196 8 323 8.0E-94 T 14-09-2016 AMK01_RS07115 a54ff320c3acd4177a89b75d4bfe0831 256 Pfam PF11967 Recombination protein O N terminal 1 70 3.8E-16 T 14-09-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMK01_RS07115 a54ff320c3acd4177a89b75d4bfe0831 256 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 134 225 3.0E-27 T 14-09-2016 AMK01_RS07115 a54ff320c3acd4177a89b75d4bfe0831 256 Pfam PF02565 Recombination protein O C terminal 85 221 1.9E-26 T 14-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMK01_RS07115 a54ff320c3acd4177a89b75d4bfe0831 256 Hamap MF_00201 DNA repair protein RecO [recO]. 1 237 16.801 T 14-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMK01_RS07115 a54ff320c3acd4177a89b75d4bfe0831 256 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 222 3.3E-40 T 14-09-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMK01_RS07115 a54ff320c3acd4177a89b75d4bfe0831 256 SUPERFAMILY SSF57863 88 177 1.2E-12 T 14-09-2016 AMK01_RS07115 a54ff320c3acd4177a89b75d4bfe0831 256 PANTHER PTHR33991 1 246 6.9E-28 T 14-09-2016 AMK01_RS07115 a54ff320c3acd4177a89b75d4bfe0831 256 SUPERFAMILY SSF50249 1 67 5.14E-7 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS09740 9f2c2950ec99e88f3aca7643bdaf38b5 155 Pfam PF07977 FabA-like domain 21 143 8.1E-37 T 14-09-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK01_RS09740 9f2c2950ec99e88f3aca7643bdaf38b5 155 Gene3D G3DSA:3.10.129.10 11 150 5.2E-57 T 14-09-2016 IPR029069 HotDog domain AMK01_RS09740 9f2c2950ec99e88f3aca7643bdaf38b5 155 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 13 148 1.1E-58 T 14-09-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK01_RS09740 9f2c2950ec99e88f3aca7643bdaf38b5 155 SUPERFAMILY SSF54637 14 154 8.64E-49 T 14-09-2016 IPR029069 HotDog domain AMK01_RS09740 9f2c2950ec99e88f3aca7643bdaf38b5 155 PANTHER PTHR30272 13 153 1.0E-68 T 14-09-2016 AMK01_RS09740 9f2c2950ec99e88f3aca7643bdaf38b5 155 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 12 151 33.131 T 14-09-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK01_RS08145 9e61f897546d7c1f15db47f3a7e040b5 204 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 168 5.0E-38 T 14-09-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 AMK01_RS08145 9e61f897546d7c1f15db47f3a7e040b5 204 PANTHER PTHR33269:SF4 1 199 2.3E-67 T 14-09-2016 AMK01_RS08145 9e61f897546d7c1f15db47f3a7e040b5 204 PANTHER PTHR33269 1 199 2.3E-67 T 14-09-2016 AMK01_RS07200 bcf3a4f8240bba0591cfd0438318abba 281 PANTHER PTHR15362:SF2 21 165 2.4E-30 T 14-09-2016 AMK01_RS07200 bcf3a4f8240bba0591cfd0438318abba 281 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 36 201 5.7E-33 T 14-09-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AMK01_RS07200 bcf3a4f8240bba0591cfd0438318abba 281 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 72 94 - T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK01_RS07200 bcf3a4f8240bba0591cfd0438318abba 281 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 217 252 3.4E-10 T 14-09-2016 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal AMK01_RS07200 bcf3a4f8240bba0591cfd0438318abba 281 Pfam PF01066 CDP-alcohol phosphatidyltransferase 31 94 2.2E-14 T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK01_RS07200 bcf3a4f8240bba0591cfd0438318abba 281 PANTHER PTHR15362 21 165 2.4E-30 T 14-09-2016 AMK01_RS15840 1359aef513518c71b0c55a67c23a0c74 394 SUPERFAMILY SSF103473 15 392 9.55E-31 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS15840 1359aef513518c71b0c55a67c23a0c74 394 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 386 7.9E-119 T 14-09-2016 IPR010645 Uncharacterised MFS-type transporter YbfB AMK01_RS15840 1359aef513518c71b0c55a67c23a0c74 394 Gene3D G3DSA:1.20.1250.20 22 204 1.3E-12 T 14-09-2016 AMK01_RS15840 1359aef513518c71b0c55a67c23a0c74 394 Gene3D G3DSA:1.20.1250.20 214 392 1.0E-10 T 14-09-2016 AMK01_RS15840 1359aef513518c71b0c55a67c23a0c74 394 PANTHER PTHR23537:SF1 1 393 3.9E-48 T 14-09-2016 AMK01_RS15840 1359aef513518c71b0c55a67c23a0c74 394 PANTHER PTHR23537 1 393 3.9E-48 T 14-09-2016 AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 PIRSF PIRSF002599 1 70 4.0E-22 T 14-09-2016 IPR012156 Cold shock, CspA GO:0003676 AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 PANTHER PTHR11544 4 69 1.3E-21 T 14-09-2016 AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 Gene3D G3DSA:2.40.50.140 4 68 3.6E-27 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 2.6E-24 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 SUPERFAMILY SSF50249 3 68 6.86E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 PRINTS PR00050 Cold shock protein signature 41 59 5.3E-12 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 PRINTS PR00050 Cold shock protein signature 5 20 5.3E-12 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 PRINTS PR00050 Cold shock protein signature 26 35 5.3E-12 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 SMART SM00357 4 70 6.8E-24 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AMK01_RS13190 c0f3753fb021b1891e07a066f00111ad 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 14-09-2016 IPR019844 Cold-shock conserved site AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 Gene3D G3DSA:3.20.20.80 264 547 7.1E-57 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 Gene3D G3DSA:2.60.120.260 2 143 2.1E-29 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 PRINTS PR00132 Glycosyl hydrolase family 2 signature 366 381 3.4E-8 T 14-09-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 PRINTS PR00132 Glycosyl hydrolase family 2 signature 270 284 3.4E-8 T 14-09-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 PRINTS PR00132 Glycosyl hydrolase family 2 signature 302 320 3.4E-8 T 14-09-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 47 150 2.5E-11 T 14-09-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 264 541 4.1E-29 T 14-09-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 366 381 - T 14-09-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 SUPERFAMILY SSF51445 266 547 1.77E-59 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 Gene3D G3DSA:2.60.40.320 144 260 1.2E-17 T 14-09-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 Pfam PF00703 Glycosyl hydrolases family 2 156 259 8.6E-10 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 312 337 - T 14-09-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 PANTHER PTHR10066 2 610 2.1E-95 T 14-09-2016 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 SUPERFAMILY SSF49785 1 153 1.98E-32 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 PANTHER PTHR10066:SF46 2 610 2.1E-95 T 14-09-2016 AMK01_RS19140 a4cdf9266076c3215e496c6943daff0d 748 SUPERFAMILY SSF49303 166 259 1.7E-11 T 14-09-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 SUPERFAMILY SSF52540 12 235 8.5E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 PANTHER PTHR24220 349 453 3.3E-150 T 14-09-2016 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 PANTHER PTHR24220 275 304 3.3E-150 T 14-09-2016 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 SUPERFAMILY SSF52540 332 554 5.65E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 Gene3D G3DSA:3.40.50.300 327 553 9.7E-69 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 Gene3D G3DSA:3.40.50.300 7 234 7.0E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 SMART SM00382 358 548 2.3E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 SMART SM00382 39 246 1.2E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 PANTHER PTHR24220:SF546 275 304 3.3E-150 T 14-09-2016 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 Pfam PF00005 ABC transporter 350 493 1.4E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 Pfam PF00005 ABC transporter 30 172 1.6E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 PANTHER PTHR24220 15 245 3.3E-150 T 14-09-2016 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 PANTHER PTHR24220:SF546 15 245 3.3E-150 T 14-09-2016 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 PANTHER PTHR24220:SF546 349 453 3.3E-150 T 14-09-2016 AMK01_RS16770 ae802093fceb81fd472418419d38cb6c 581 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS09030 6127d9eddddd477c6393d6be47723c12 318 Gene3D G3DSA:1.10.530.10 71 188 2.9E-29 T 14-09-2016 AMK01_RS09030 6127d9eddddd477c6393d6be47723c12 318 Pfam PF01464 Transglycosylase SLT domain 75 165 2.5E-16 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AMK01_RS09030 6127d9eddddd477c6393d6be47723c12 318 PANTHER PTHR21666 52 192 8.8E-29 T 14-09-2016 AMK01_RS09030 6127d9eddddd477c6393d6be47723c12 318 SUPERFAMILY SSF53955 58 187 2.81E-31 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS09030 6127d9eddddd477c6393d6be47723c12 318 PANTHER PTHR21666:SF203 52 192 8.8E-29 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 SMART SM00563 451 561 1.5E-16 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Gene3D G3DSA:3.40.50.980 643 795 2.7E-20 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Gene3D G3DSA:3.40.50.980 796 954 6.5E-38 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Pfam PF00501 AMP-binding enzyme 641 1030 1.7E-69 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Gene3D G3DSA:3.30.300.30 1028 1124 2.0E-7 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 PANTHER PTHR24096 545 1126 1.3E-240 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 ProSitePatterns PS00455 Putative AMP-binding domain signature. 790 801 - T 14-09-2016 IPR020845 AMP-binding, conserved site AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 SUPERFAMILY SSF69593 407 597 1.96E-20 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Gene3D G3DSA:2.30.38.10 955 1024 4.1E-14 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 PANTHER PTHR24096:SF177 545 1126 1.3E-240 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Gene3D G3DSA:1.20.1250.20 10 196 6.8E-6 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Gene3D G3DSA:1.20.1250.20 218 421 6.8E-7 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 SUPERFAMILY SSF56801 630 1123 3.53E-99 T 14-09-2016 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Pfam PF07690 Major Facilitator Superfamily 14 381 2.0E-12 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 Pfam PF01553 Acyltransferase 436 558 1.8E-12 T 14-09-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK01_RS05215 4cff39545835a9d7d566737c0b93b47d 1131 SUPERFAMILY SSF103473 14 419 2.09E-20 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS10225 149ac28ddfee96527da9d449ae8bf566 225 SUPERFAMILY SSF53300 25 175 3.71E-18 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS10225 149ac28ddfee96527da9d449ae8bf566 225 SMART SM00327 21 195 1.3E-9 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS10225 149ac28ddfee96527da9d449ae8bf566 225 PIRSF PIRSF020634 19 223 2.9E-68 T 14-09-2016 IPR011392 Tellurite resistance, TerY AMK01_RS10225 149ac28ddfee96527da9d449ae8bf566 225 Pfam PF00092 von Willebrand factor type A domain 26 175 1.1E-9 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS10225 149ac28ddfee96527da9d449ae8bf566 225 Gene3D G3DSA:3.40.50.410 25 175 1.8E-10 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS11520 976d3b6b1c317938a57fcc499d46ee3c 413 PANTHER PTHR11601:SF17 13 412 2.0E-182 T 14-09-2016 AMK01_RS11520 976d3b6b1c317938a57fcc499d46ee3c 413 Gene3D G3DSA:3.90.1150.10 292 406 3.6E-24 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS11520 976d3b6b1c317938a57fcc499d46ee3c 413 Pfam PF00266 Aminotransferase class-V 32 401 1.4E-143 T 14-09-2016 IPR000192 Aminotransferase class V domain AMK01_RS11520 976d3b6b1c317938a57fcc499d46ee3c 413 SUPERFAMILY SSF53383 10 407 1.16E-128 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS11520 976d3b6b1c317938a57fcc499d46ee3c 413 PANTHER PTHR11601 13 412 2.0E-182 T 14-09-2016 AMK01_RS11520 976d3b6b1c317938a57fcc499d46ee3c 413 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 14 412 1.2E-178 T 14-09-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK01_RS11520 976d3b6b1c317938a57fcc499d46ee3c 413 Gene3D G3DSA:3.40.640.10 43 291 5.2E-88 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS11520 976d3b6b1c317938a57fcc499d46ee3c 413 PIRSF PIRSF005572 29 410 8.6E-49 T 14-09-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK01_RS19645 b9fad0147c1f74b04086f290892b52da 330 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 1 327 7.6E-197 T 14-09-2016 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK01_RS19645 b9fad0147c1f74b04086f290892b52da 330 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 8 40 3.8E-16 T 14-09-2016 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 AMK01_RS19645 b9fad0147c1f74b04086f290892b52da 330 Gene3D G3DSA:3.40.50.300 56 229 1.6E-24 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19645 b9fad0147c1f74b04086f290892b52da 330 Pfam PF07728 AAA domain (dynein-related subfamily) 67 189 7.5E-10 T 14-09-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMK01_RS19645 b9fad0147c1f74b04086f290892b52da 330 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 243 294 1.5E-4 T 14-09-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal AMK01_RS19645 b9fad0147c1f74b04086f290892b52da 330 SUPERFAMILY SSF52540 37 290 3.66E-31 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19415 da405d774d996c9b918aeb2f4fedafeb 431 Pfam PF07690 Major Facilitator Superfamily 26 382 6.5E-35 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS19415 da405d774d996c9b918aeb2f4fedafeb 431 Gene3D G3DSA:1.20.1250.20 240 417 8.3E-20 T 14-09-2016 AMK01_RS19415 da405d774d996c9b918aeb2f4fedafeb 431 Gene3D G3DSA:1.20.1250.20 17 208 6.5E-25 T 14-09-2016 AMK01_RS19415 da405d774d996c9b918aeb2f4fedafeb 431 PANTHER PTHR11360:SF137 14 418 2.1E-153 T 14-09-2016 AMK01_RS19415 da405d774d996c9b918aeb2f4fedafeb 431 PANTHER PTHR11360 14 418 2.1E-153 T 14-09-2016 AMK01_RS19415 da405d774d996c9b918aeb2f4fedafeb 431 SUPERFAMILY SSF103473 14 419 2.49E-56 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS05900 a547d96f70e10167744f9a1753e8736b 267 PANTHER PTHR36833 5 267 7.8E-44 T 14-09-2016 AMK01_RS05900 a547d96f70e10167744f9a1753e8736b 267 Pfam PF06182 ABC-2 family transporter protein 42 266 1.0E-35 T 14-09-2016 IPR010390 Protein of unknown function DUF990 AMK01_RS18100 d69b72ef4b6eac027e868130e86bb848 73 PRINTS PR01249 Ribosomal protein L31 signature 50 68 1.6E-9 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18100 d69b72ef4b6eac027e868130e86bb848 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.6E-9 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18100 d69b72ef4b6eac027e868130e86bb848 73 Pfam PF01197 Ribosomal protein L31 1 69 8.2E-28 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18100 d69b72ef4b6eac027e868130e86bb848 73 PANTHER PTHR33280 1 71 1.8E-30 T 14-09-2016 AMK01_RS18100 d69b72ef4b6eac027e868130e86bb848 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 70 7.0E-34 T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18100 d69b72ef4b6eac027e868130e86bb848 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 60 - T 14-09-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18100 d69b72ef4b6eac027e868130e86bb848 73 SUPERFAMILY SSF143800 1 71 2.47E-23 T 14-09-2016 AMK01_RS18100 d69b72ef4b6eac027e868130e86bb848 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 72 27.706 T 14-09-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS16460 5ff72db08052de8d39c4053a4ac0dcd1 169 SUPERFAMILY SSF55073 2 161 4.08E-41 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS16460 5ff72db08052de8d39c4053a4ac0dcd1 169 PANTHER PTHR11920:SF341 2 140 7.8E-14 T 14-09-2016 AMK01_RS16460 5ff72db08052de8d39c4053a4ac0dcd1 169 SMART SM00044 1 148 0.0099 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS16460 5ff72db08052de8d39c4053a4ac0dcd1 169 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 7 157 3.4E-15 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS16460 5ff72db08052de8d39c4053a4ac0dcd1 169 Gene3D G3DSA:3.30.70.1230 6 160 3.5E-28 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS16460 5ff72db08052de8d39c4053a4ac0dcd1 169 PANTHER PTHR11920 2 140 7.8E-14 T 14-09-2016 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 SUPERFAMILY SSF53067 140 308 9.71E-32 T 14-09-2016 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 SUPERFAMILY SSF109604 331 465 2.29E-10 T 14-09-2016 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 Gene3D G3DSA:3.30.420.40 16 135 1.6E-33 T 14-09-2016 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 Pfam PF02541 Ppx/GppA phosphatase family 31 307 1.6E-44 T 14-09-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 PANTHER PTHR30005 16 506 2.8E-77 T 14-09-2016 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 SUPERFAMILY SSF53067 16 135 6.47E-32 T 14-09-2016 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 Gene3D G3DSA:3.30.420.150 143 308 2.4E-25 T 14-09-2016 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 16 306 4.3E-95 T 14-09-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AMK01_RS07600 318e70368b6adc57f48213460f89baa9 506 PANTHER PTHR30005:SF4 16 506 2.8E-77 T 14-09-2016 AMK01_RS12340 267e20dd41b0068111632df2a554154b 591 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 7 178 8.5E-12 T 14-09-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMK01_RS12340 267e20dd41b0068111632df2a554154b 591 Gene3D G3DSA:3.40.30.10 275 419 4.1E-48 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS12340 267e20dd41b0068111632df2a554154b 591 Gene3D G3DSA:2.60.120.260 444 590 1.1E-43 T 14-09-2016 IPR008979 Galactose-binding domain-like AMK01_RS12340 267e20dd41b0068111632df2a554154b 591 Pfam PF00578 AhpC/TSA family 277 396 6.6E-13 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS12340 267e20dd41b0068111632df2a554154b 591 PANTHER PTHR13833 44 422 2.5E-37 T 14-09-2016 AMK01_RS12340 267e20dd41b0068111632df2a554154b 591 SUPERFAMILY SSF52833 272 413 8.44E-36 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS12340 267e20dd41b0068111632df2a554154b 591 PANTHER PTHR13833:SF51 44 422 2.5E-37 T 14-09-2016 AMK01_RS15865 947f5d65f33125a4df0dd6ca46ed09e1 155 PANTHER PTHR36929 8 155 4.1E-35 T 14-09-2016 AMK01_RS15865 947f5d65f33125a4df0dd6ca46ed09e1 155 PANTHER PTHR36929:SF1 8 155 4.1E-35 T 14-09-2016 AMK01_RS15865 947f5d65f33125a4df0dd6ca46ed09e1 155 Gene3D G3DSA:3.30.530.20 3 154 6.4E-52 T 14-09-2016 IPR023393 START-like domain AMK01_RS15865 947f5d65f33125a4df0dd6ca46ed09e1 155 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 16 152 2.8E-33 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS15865 947f5d65f33125a4df0dd6ca46ed09e1 155 SUPERFAMILY SSF55961 4 154 1.4E-45 T 14-09-2016 AMK01_RS08515 ef85c7d272208185f9139693e7bd00ec 101 Gene3D G3DSA:4.10.830.10 41 101 2.7E-27 T 14-09-2016 AMK01_RS08515 ef85c7d272208185f9139693e7bd00ec 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 4.7E-22 T 14-09-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08515 ef85c7d272208185f9139693e7bd00ec 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.028 T 14-09-2016 IPR023036 Ribosomal protein S14, bacterial/plastid AMK01_RS08515 ef85c7d272208185f9139693e7bd00ec 101 PANTHER PTHR19836 1 101 1.8E-49 T 14-09-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08515 ef85c7d272208185f9139693e7bd00ec 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-09-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 AMK01_RS08515 ef85c7d272208185f9139693e7bd00ec 101 SUPERFAMILY SSF57716 2 101 7.13E-34 T 14-09-2016 AMK01_RS00480 072d9498f711360a9a55e990f62ebdfc 426 SUPERFAMILY SSF53383 23 418 9.65E-131 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS00480 072d9498f711360a9a55e990f62ebdfc 426 Gene3D G3DSA:3.90.1150.10 303 419 9.5E-38 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS00480 072d9498f711360a9a55e990f62ebdfc 426 Pfam PF00202 Aminotransferase class-III 21 416 1.1E-125 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS00480 072d9498f711360a9a55e990f62ebdfc 426 PANTHER PTHR11986 5 426 1.1E-196 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS00480 072d9498f711360a9a55e990f62ebdfc 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS00480 072d9498f711360a9a55e990f62ebdfc 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 418 1.2E-181 T 14-09-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AMK01_RS00480 072d9498f711360a9a55e990f62ebdfc 426 PANTHER PTHR11986:SF70 5 426 1.1E-196 T 14-09-2016 AMK01_RS00480 072d9498f711360a9a55e990f62ebdfc 426 Gene3D G3DSA:3.40.640.10 58 302 2.6E-87 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS15825 f0a0b387d42c335501f1429decf01af1 194 Pfam PF07298 NnrU protein 4 191 2.2E-60 T 14-09-2016 IPR009915 NnrU domain AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 Gene3D G3DSA:3.30.1510.10 132 250 3.4E-55 T 14-09-2016 AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 SUPERFAMILY SSF52540 7 557 1.53E-245 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 4 559 48.059 T 14-09-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 106 116 - T 14-09-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 331 342 - T 14-09-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 Gene3D G3DSA:3.40.50.300 251 444 1.1E-148 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 Gene3D G3DSA:3.40.50.300 17 131 1.1E-148 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 PANTHER PTHR10025 6 558 0.0 T 14-09-2016 AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 Gene3D G3DSA:3.10.410.10 447 535 1.9E-37 T 14-09-2016 AMK01_RS15675 b24194debe65eef3a2e209fa86759cec 559 Pfam PF01268 Formate--tetrahydrofolate ligase 5 559 1.8E-266 T 14-09-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK01_RS12470 c2d26f2b4de7b7438d706dc28a3d3cdb 210 SMART SM00986 39 202 4.0E-30 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS12470 c2d26f2b4de7b7438d706dc28a3d3cdb 210 SMART SM00987 39 202 4.0E-30 T 14-09-2016 AMK01_RS12470 c2d26f2b4de7b7438d706dc28a3d3cdb 210 Gene3D G3DSA:3.40.470.10 6 209 1.7E-41 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS12470 c2d26f2b4de7b7438d706dc28a3d3cdb 210 PANTHER PTHR42160 2 210 4.9E-71 T 14-09-2016 AMK01_RS12470 c2d26f2b4de7b7438d706dc28a3d3cdb 210 Pfam PF03167 Uracil DNA glycosylase superfamily 44 198 2.9E-22 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS12470 c2d26f2b4de7b7438d706dc28a3d3cdb 210 PANTHER PTHR42160:SF1 2 210 4.9E-71 T 14-09-2016 AMK01_RS12470 c2d26f2b4de7b7438d706dc28a3d3cdb 210 SUPERFAMILY SSF52141 7 209 1.28E-53 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 17 181 4.2E-29 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 SMART SM00052 192 434 4.0E-87 T 14-09-2016 IPR001633 EAL domain AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 Pfam PF00990 Diguanylate cyclase, GGDEF domain 21 177 1.2E-34 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 Gene3D G3DSA:3.20.20.450 195 441 2.5E-83 T 14-09-2016 IPR001633 EAL domain AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 SUPERFAMILY SSF55073 26 184 9.42E-39 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 SUPERFAMILY SSF141868 197 441 4.45E-80 T 14-09-2016 IPR001633 EAL domain AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 PANTHER PTHR33121 172 429 1.6E-67 T 14-09-2016 AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 SMART SM00267 10 182 4.3E-40 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 PANTHER PTHR33121:SF13 172 429 1.6E-67 T 14-09-2016 AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 Gene3D G3DSA:3.30.70.270 22 190 8.9E-47 T 14-09-2016 AMK01_RS04340 c5cee4ecdaa26154760e26952d009207 454 Pfam PF00563 EAL domain 198 429 9.8E-68 T 14-09-2016 IPR001633 EAL domain AMK01_RS12415 fb605e4342bae79c79bcc7b5f6c8149d 136 PANTHER PTHR13009 8 136 5.4E-16 T 14-09-2016 AMK01_RS12415 fb605e4342bae79c79bcc7b5f6c8149d 136 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 19 132 2.2E-24 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS12415 fb605e4342bae79c79bcc7b5f6c8149d 136 SUPERFAMILY SSF55961 6 133 9.43E-40 T 14-09-2016 AMK01_RS12415 fb605e4342bae79c79bcc7b5f6c8149d 136 Gene3D G3DSA:3.30.530.20 2 133 3.0E-40 T 14-09-2016 IPR023393 START-like domain AMK01_RS19375 b6fc752b8cee9aca231490530a3a5f9d 413 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 26 411 1.0E-176 T 14-09-2016 AMK01_RS19375 b6fc752b8cee9aca231490530a3a5f9d 413 Pfam PF01960 ArgJ family 24 413 3.3E-139 T 14-09-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK01_RS19375 b6fc752b8cee9aca231490530a3a5f9d 413 PANTHER PTHR23100:SF0 20 413 1.5E-166 T 14-09-2016 AMK01_RS19375 b6fc752b8cee9aca231490530a3a5f9d 413 PANTHER PTHR23100 20 413 1.5E-166 T 14-09-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK01_RS19375 b6fc752b8cee9aca231490530a3a5f9d 413 Gene3D G3DSA:3.60.70.12 18 285 1.3E-92 T 14-09-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK01_RS19375 b6fc752b8cee9aca231490530a3a5f9d 413 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 19 413 8.8E-115 T 14-09-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK01_RS19375 b6fc752b8cee9aca231490530a3a5f9d 413 SUPERFAMILY SSF56266 20 410 7.19E-135 T 14-09-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK01_RS19375 b6fc752b8cee9aca231490530a3a5f9d 413 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 413 153.948 T 14-09-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 AMK01_RS02055 c0087a645d5e452d96b338a7bdb663e2 534 Pfam PF00795 Carbon-nitrogen hydrolase 243 495 8.5E-32 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS02055 c0087a645d5e452d96b338a7bdb663e2 534 PANTHER PTHR38686 5 534 2.5E-60 T 14-09-2016 AMK01_RS02055 c0087a645d5e452d96b338a7bdb663e2 534 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 13 522 21.208 T 14-09-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 AMK01_RS02055 c0087a645d5e452d96b338a7bdb663e2 534 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 76 478 2.5E-102 T 14-09-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 AMK01_RS02055 c0087a645d5e452d96b338a7bdb663e2 534 Gene3D G3DSA:3.60.110.10 244 495 1.1E-25 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS02055 c0087a645d5e452d96b338a7bdb663e2 534 SUPERFAMILY SSF56317 241 495 5.36E-39 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS08320 2a46a8e98f1a661dabb0b9c795a328d2 339 PIRSF PIRSF031982 12 334 8.2E-60 T 14-09-2016 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL AMK01_RS08320 2a46a8e98f1a661dabb0b9c795a328d2 339 Gene3D G3DSA:3.40.50.1820 22 166 8.5E-39 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS08320 2a46a8e98f1a661dabb0b9c795a328d2 339 Gene3D G3DSA:3.40.50.1820 219 308 8.5E-39 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS08320 2a46a8e98f1a661dabb0b9c795a328d2 339 SUPERFAMILY SSF53474 219 309 6.73E-28 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS08320 2a46a8e98f1a661dabb0b9c795a328d2 339 SUPERFAMILY SSF53474 62 166 6.73E-28 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS08320 2a46a8e98f1a661dabb0b9c795a328d2 339 SUPERFAMILY SSF53474 24 35 6.73E-28 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 167 0.004 T 14-09-2016 AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 1.3E-65 T 14-09-2016 AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PANTHER PTHR24322 154 186 2.1E-54 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 24 52 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.1E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.1E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.1E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 SUPERFAMILY SSF51735 6 247 2.9E-82 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PANTHER PTHR24322:SF608 11 138 2.1E-54 T 14-09-2016 AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PANTHER PTHR24322:SF608 154 186 2.1E-54 T 14-09-2016 AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PANTHER PTHR24322 11 138 2.1E-54 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 Gene3D G3DSA:3.40.50.720 2 247 5.2E-83 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.2E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.2E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.2E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.2E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05340 904c5348580fa74d3f146abe7b20b361 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.2E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19720 0d027bfb917d11c9b8ab80f17f32b447 171 Pfam PF11157 Protein of unknown function (DUF2937) 4 164 9.0E-48 T 14-09-2016 IPR022584 Protein of unknown function DUF2937 AMK01_RS03370 4a6950c3ff7e66bfb7b2ac70ed5413bc 473 PANTHER PTHR33908:SF1 13 397 6.7E-43 T 14-09-2016 AMK01_RS03370 4a6950c3ff7e66bfb7b2ac70ed5413bc 473 PANTHER PTHR33908 13 397 6.7E-43 T 14-09-2016 AMK01_RS03370 4a6950c3ff7e66bfb7b2ac70ed5413bc 473 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 48 207 3.5E-29 T 14-09-2016 AMK01_RS14230 4758360afd2f0cbb753ef3ce5ad0eb33 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 78 8.0E-15 T 14-09-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS14230 4758360afd2f0cbb753ef3ce5ad0eb33 159 PANTHER PTHR34846:SF2 10 159 7.9E-13 T 14-09-2016 AMK01_RS14230 4758360afd2f0cbb753ef3ce5ad0eb33 159 Gene3D G3DSA:1.20.1290.10 2 146 3.0E-54 T 14-09-2016 IPR029032 AhpD-like AMK01_RS14230 4758360afd2f0cbb753ef3ce5ad0eb33 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 1.1E-19 T 14-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS14230 4758360afd2f0cbb753ef3ce5ad0eb33 159 SUPERFAMILY SSF69118 4 145 8.19E-46 T 14-09-2016 IPR029032 AhpD-like AMK01_RS14230 4758360afd2f0cbb753ef3ce5ad0eb33 159 PANTHER PTHR34846 10 159 7.9E-13 T 14-09-2016 AMK01_RS01435 7f77102f765b572390a1a31206b28139 203 PANTHER PTHR12725 1 185 6.8E-23 T 14-09-2016 AMK01_RS01435 7f77102f765b572390a1a31206b28139 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 184 4.3E-14 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS01435 7f77102f765b572390a1a31206b28139 203 Gene3D G3DSA:3.40.50.1000 1 186 9.7E-32 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS01435 7f77102f765b572390a1a31206b28139 203 SUPERFAMILY SSF56784 2 190 8.41E-32 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS01435 7f77102f765b572390a1a31206b28139 203 PANTHER PTHR12725:SF63 1 185 6.8E-23 T 14-09-2016 AMK01_RS01435 7f77102f765b572390a1a31206b28139 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 94 184 2.0E-11 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS10635 9c0053aacd3cb58a886759222ff53520 124 SUPERFAMILY SSF51316 3 121 9.94E-31 T 14-09-2016 IPR011057 Mss4-like AMK01_RS10635 9c0053aacd3cb58a886759222ff53520 124 PANTHER PTHR33337 5 116 6.9E-20 T 14-09-2016 AMK01_RS10635 9c0053aacd3cb58a886759222ff53520 124 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 104 1.1E-13 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS10635 9c0053aacd3cb58a886759222ff53520 124 Gene3D G3DSA:3.90.1590.10 3 121 4.3E-28 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS10635 9c0053aacd3cb58a886759222ff53520 124 PANTHER PTHR33337:SF10 5 116 6.9E-20 T 14-09-2016 AMK01_RS06430 3fb5fad947ee74a23d44532ddbf64e2f 140 PANTHER PTHR12735 5 139 1.1E-44 T 14-09-2016 AMK01_RS06430 3fb5fad947ee74a23d44532ddbf64e2f 140 Pfam PF02657 Fe-S metabolism associated domain 8 132 2.4E-46 T 14-09-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 AMK01_RS06430 3fb5fad947ee74a23d44532ddbf64e2f 140 Gene3D G3DSA:3.90.1010.10 3 135 8.9E-53 T 14-09-2016 AMK01_RS06430 3fb5fad947ee74a23d44532ddbf64e2f 140 SUPERFAMILY SSF82649 2 135 1.62E-45 T 14-09-2016 AMK01_RS06430 3fb5fad947ee74a23d44532ddbf64e2f 140 PANTHER PTHR12735:SF26 5 139 1.1E-44 T 14-09-2016 AMK01_RS10900 4fd928c4efecd231a974025fc8625efa 743 PANTHER PTHR30183 153 725 1.9E-176 T 14-09-2016 AMK01_RS10900 4fd928c4efecd231a974025fc8625efa 743 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 242 429 3.1E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10900 4fd928c4efecd231a974025fc8625efa 743 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 538 708 2.4E-12 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10900 4fd928c4efecd231a974025fc8625efa 743 SUPERFAMILY SSF161098 164 433 3.27E-46 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10900 4fd928c4efecd231a974025fc8625efa 743 PANTHER PTHR30183:SF7 153 725 1.9E-176 T 14-09-2016 AMK01_RS10900 4fd928c4efecd231a974025fc8625efa 743 Gene3D G3DSA:1.10.3720.10 166 431 2.2E-46 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10900 4fd928c4efecd231a974025fc8625efa 743 Gene3D G3DSA:1.10.3720.10 460 720 4.8E-40 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10900 4fd928c4efecd231a974025fc8625efa 743 SUPERFAMILY SSF161098 457 720 1.12E-43 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11720 4644c89e0464d1c29cd326a89436a3a5 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 121 1.0E-20 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS11720 4644c89e0464d1c29cd326a89436a3a5 345 SUPERFAMILY SSF55347 126 320 8.01E-31 T 14-09-2016 AMK01_RS11720 4644c89e0464d1c29cd326a89436a3a5 345 Gene3D G3DSA:3.30.360.10 140 344 7.5E-39 T 14-09-2016 AMK01_RS11720 4644c89e0464d1c29cd326a89436a3a5 345 PANTHER PTHR22604 5 344 6.6E-86 T 14-09-2016 AMK01_RS11720 4644c89e0464d1c29cd326a89436a3a5 345 PANTHER PTHR22604:SF123 5 344 6.6E-86 T 14-09-2016 AMK01_RS11720 4644c89e0464d1c29cd326a89436a3a5 345 Gene3D G3DSA:3.40.50.720 4 139 2.8E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS11720 4644c89e0464d1c29cd326a89436a3a5 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 229 4.0E-9 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS11720 4644c89e0464d1c29cd326a89436a3a5 345 SUPERFAMILY SSF51735 4 154 1.27E-41 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 104 9.0E-40 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 Pfam PF00085 Thioredoxin 5 103 1.9E-33 T 14-09-2016 IPR013766 Thioredoxin domain GO:0045454 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 PRINTS PR00421 Thioredoxin family signature 30 39 8.9E-10 T 14-09-2016 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 PRINTS PR00421 Thioredoxin family signature 22 30 8.9E-10 T 14-09-2016 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 PRINTS PR00421 Thioredoxin family signature 70 81 8.9E-10 T 14-09-2016 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 Gene3D G3DSA:3.40.30.10 4 104 1.6E-37 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 PANTHER PTHR10438:SF256 10 98 8.3E-43 T 14-09-2016 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 PIRSF PIRSF000077 1 106 1.1E-42 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 PANTHER PTHR10438 10 98 8.3E-43 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 14-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMK01_RS00130 ccbe8939b09c21f13fbcb7ac798c2da5 106 SUPERFAMILY SSF52833 4 105 4.21E-38 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 PANTHER PTHR37469 80 2819 0.0 T 14-09-2016 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 SUPERFAMILY SSF48208 2328 2819 1.19E-94 T 14-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 Pfam PF10091 Putative glucoamylase 1298 1505 4.8E-13 T 14-09-2016 IPR019282 Domain of unknown function DUF2329 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 PANTHER PTHR37469:SF2 80 2819 0.0 T 14-09-2016 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 Gene3D G3DSA:2.70.98.40 2056 2378 1.5E-78 T 14-09-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 Gene3D G3DSA:2.70.98.40 1548 1841 3.1E-83 T 14-09-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 SUPERFAMILY SSF74650 1548 1808 8.47E-75 T 14-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 SUPERFAMILY SSF74650 2056 2321 9.1E-82 T 14-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 Pfam PF06165 Glycosyltransferase family 36 2079 2320 6.8E-67 T 14-09-2016 IPR010383 Glycosyl hydrolase 94 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 Pfam PF06165 Glycosyltransferase family 36 1562 1805 7.3E-63 T 14-09-2016 IPR010383 Glycosyl hydrolase 94 AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 SMART SM01068 1534 1595 1.8E-18 T 14-09-2016 IPR009342 Putative carbohydrate binding domain AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 SMART SM01068 2056 2121 3.2E-33 T 14-09-2016 IPR009342 Putative carbohydrate binding domain AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2350 2777 5.7E-109 T 14-09-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain AMK01_RS20525 7dc0397b1a646286c3541aefc87bda1e 2839 Gene3D G3DSA:2.60.420.10 2768 2829 2.3E-11 T 14-09-2016 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 SUPERFAMILY SSF46785 1 110 1.02E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 Gene3D G3DSA:3.40.190.10 195 264 7.1E-16 T 14-09-2016 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.1E-21 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 Gene3D G3DSA:3.40.190.10 80 194 1.5E-19 T 14-09-2016 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.0E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.0E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.0E-9 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 SUPERFAMILY SSF53850 92 295 9.19E-40 T 14-09-2016 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 PANTHER PTHR30126 1 307 1.9E-69 T 14-09-2016 AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 Pfam PF03466 LysR substrate binding domain 92 291 1.4E-41 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS12520 824b66f17818f1a08e5e1bc66340e76f 307 Gene3D G3DSA:1.10.10.10 1 79 6.3E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06050 20640553424ce3d24229b4a54b7fb1e9 171 PANTHER PTHR33164 17 147 2.1E-25 T 14-09-2016 AMK01_RS06050 20640553424ce3d24229b4a54b7fb1e9 171 PANTHER PTHR33164:SF1 17 147 2.1E-25 T 14-09-2016 AMK01_RS06050 20640553424ce3d24229b4a54b7fb1e9 171 Pfam PF01047 MarR family 44 100 1.1E-8 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS06050 20640553424ce3d24229b4a54b7fb1e9 171 SMART SM00347 37 142 5.0E-12 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS06050 20640553424ce3d24229b4a54b7fb1e9 171 SUPERFAMILY SSF46785 12 148 7.04E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06050 20640553424ce3d24229b4a54b7fb1e9 171 Gene3D G3DSA:1.10.10.10 14 148 2.4E-33 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13895 8f2683476b1ba6883ad03d4ee3d41049 270 Pfam PF00950 ABC 3 transport family 4 256 1.1E-68 T 14-09-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK01_RS13895 8f2683476b1ba6883ad03d4ee3d41049 270 SUPERFAMILY SSF81345 3 256 3.53E-35 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AMK01_RS13895 8f2683476b1ba6883ad03d4ee3d41049 270 Gene3D G3DSA:1.10.3470.10 40 261 4.9E-8 T 14-09-2016 IPR029022 ABC transporter, BtuC-like AMK01_RS13895 8f2683476b1ba6883ad03d4ee3d41049 270 PANTHER PTHR30477 4 257 5.0E-69 T 14-09-2016 AMK01_RS13895 8f2683476b1ba6883ad03d4ee3d41049 270 PANTHER PTHR30477:SF0 4 257 5.0E-69 T 14-09-2016 AMK01_RS05045 e5792997230118164ca586cfd68a9b56 121 SUPERFAMILY SSF54427 5 115 8.01E-20 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS05045 e5792997230118164ca586cfd68a9b56 121 Pfam PF12680 SnoaL-like domain 9 113 8.7E-14 T 14-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK01_RS05045 e5792997230118164ca586cfd68a9b56 121 Gene3D G3DSA:3.10.450.50 5 114 4.6E-17 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS06550 dae64d0fdd30e7710c446c4c21cb6a13 101 Gene3D G3DSA:3.30.70.900 2 91 9.5E-21 T 14-09-2016 AMK01_RS06550 dae64d0fdd30e7710c446c4c21cb6a13 101 SUPERFAMILY SSF54909 2 91 9.73E-20 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS06550 dae64d0fdd30e7710c446c4c21cb6a13 101 Pfam PF07876 Stress responsive A/B Barrel Domain 2 92 5.5E-21 T 14-09-2016 IPR013097 Stress responsive alpha-beta barrel AMK01_RS06550 dae64d0fdd30e7710c446c4c21cb6a13 101 SMART SM00886 2 93 2.8E-21 T 14-09-2016 IPR013097 Stress responsive alpha-beta barrel AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PANTHER PTHR11670 1 310 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PANTHER PTHR11670:SF38 330 469 0.0 T 14-09-2016 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 Pfam PF00330 Aconitase family (aconitate hydratase) 9 460 3.8E-158 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 469 60.798 T 14-09-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 ProSitePatterns PS00450 Aconitase family signature 1. 342 358 - T 14-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 5.7E-244 T 14-09-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 SUPERFAMILY SSF53732 4 468 2.09E-169 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 14-09-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 Gene3D G3DSA:3.30.499.10 338 469 3.9E-64 T 14-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 Gene3D G3DSA:3.30.499.10 297 306 3.9E-64 T 14-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 111 119 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 289 303 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 346 357 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 198 211 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 136 151 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 85 98 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 122 135 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 212 225 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PRINTS PR00415 Aconitase family signature 402 415 7.6E-49 T 14-09-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 Gene3D G3DSA:3.30.499.10 4 161 9.9E-25 T 14-09-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PANTHER PTHR11670:SF38 1 310 0.0 T 14-09-2016 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 Gene3D G3DSA:3.40.1060.10 170 283 6.6E-41 T 14-09-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS20365 9d60ab99f6a0b7cc75f0091caeac0143 469 PANTHER PTHR11670 330 469 0.0 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.2E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.2E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.2E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 4.2E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.2E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.2E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 PANTHER PTHR24319 1 257 2.8E-59 T 14-09-2016 AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 258 5.4E-42 T 14-09-2016 AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 Gene3D G3DSA:3.40.50.720 3 258 1.4E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 SUPERFAMILY SSF51735 6 258 3.59E-63 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06675 3c08e38e7b5270b22e5fff91271eb4d7 262 PANTHER PTHR24319:SF23 1 257 2.8E-59 T 14-09-2016 AMK01_RS01185 43a818c3c8cfc785e1cac3c6aa74b501 252 TIGRFAM TIGR02522 pilus_cpaD: pilus (Caulobacter type) biogenesis lipoprotein CpaD 38 238 4.4E-59 T 14-09-2016 IPR013361 Pilus biogenesis CpaD AMK01_RS01185 43a818c3c8cfc785e1cac3c6aa74b501 252 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 39 236 7.1E-69 T 14-09-2016 IPR019027 Pilus biogenesis CpaD-related AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 PANTHER PTHR23416:SF61 99 203 5.2E-48 T 14-09-2016 AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 PANTHER PTHR23416 99 203 5.2E-48 T 14-09-2016 AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 PANTHER PTHR23416:SF61 42 79 5.2E-48 T 14-09-2016 AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 Gene3D G3DSA:2.160.10.10 11 198 2.7E-51 T 14-09-2016 AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 142 9.1E-9 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 3 203 4.3E-99 T 14-09-2016 IPR017694 Phosphonate metabolim protein, transferase hexapeptide repeat family AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 SUPERFAMILY SSF51161 10 200 1.8E-40 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS00960 a1bec802c1cb1a468f0d2873f4bde66c 205 PANTHER PTHR23416 42 79 5.2E-48 T 14-09-2016 AMK01_RS07190 0e053cd1cc6227548e83f85b7356483f 106 PANTHER PTHR36116 1 106 3.4E-40 T 14-09-2016 AMK01_RS07190 0e053cd1cc6227548e83f85b7356483f 106 PANTHER PTHR36116:SF1 1 106 3.4E-40 T 14-09-2016 AMK01_RS07190 0e053cd1cc6227548e83f85b7356483f 106 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 106 1.9E-31 T 14-09-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AMK01_RS07190 0e053cd1cc6227548e83f85b7356483f 106 SUPERFAMILY SSF103481 5 104 3.79E-7 T 14-09-2016 AMK01_RS07190 0e053cd1cc6227548e83f85b7356483f 106 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 105 23.384 T 14-09-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 616 37.787 T 14-09-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 14-09-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 Pfam PF06480 FtsH Extracellular 10 94 4.5E-14 T 14-09-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 SMART SM00382 190 329 6.9E-26 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 PANTHER PTHR23076 5 607 0.0 T 14-09-2016 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 107 599 3.1E-237 T 14-09-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 3.2E-46 T 14-09-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 SUPERFAMILY SSF140990 409 603 1.57E-73 T 14-09-2016 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 SUPERFAMILY SSF52540 149 397 1.85E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 Pfam PF01434 Peptidase family M41 387 598 9.3E-80 T 14-09-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 Gene3D G3DSA:3.40.50.300 154 338 8.0E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17850 6f778e97ebbe9b204b23300a4d5f39e3 643 Gene3D G3DSA:1.10.8.60 339 412 9.5E-30 T 14-09-2016 AMK01_RS11025 5cdfcf5707060f51f8ece0af9221b257 717 Pfam PF00924 Mechanosensitive ion channel 482 682 4.6E-38 T 14-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK01_RS11025 5cdfcf5707060f51f8ece0af9221b257 717 Gene3D G3DSA:2.30.30.60 541 586 2.0E-9 T 14-09-2016 AMK01_RS11025 5cdfcf5707060f51f8ece0af9221b257 717 SUPERFAMILY SSF82861 468 523 1.57E-11 T 14-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMK01_RS11025 5cdfcf5707060f51f8ece0af9221b257 717 Gene3D G3DSA:3.30.70.100 596 680 4.7E-6 T 14-09-2016 AMK01_RS11025 5cdfcf5707060f51f8ece0af9221b257 717 SUPERFAMILY SSF82689 588 689 5.49E-14 T 14-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK01_RS11025 5cdfcf5707060f51f8ece0af9221b257 717 PANTHER PTHR30460 85 320 5.1E-63 T 14-09-2016 AMK01_RS11025 5cdfcf5707060f51f8ece0af9221b257 717 PANTHER PTHR30460 340 713 5.1E-63 T 14-09-2016 AMK01_RS11025 5cdfcf5707060f51f8ece0af9221b257 717 SUPERFAMILY SSF50182 525 587 2.06E-10 T 14-09-2016 IPR010920 LSM domain AMK01_RS17890 b3234f2f133a87272b2b92e847ba825e 151 PANTHER PTHR31793 22 146 3.7E-38 T 14-09-2016 AMK01_RS17890 b3234f2f133a87272b2b92e847ba825e 151 Gene3D G3DSA:3.10.129.10 17 144 4.3E-42 T 14-09-2016 IPR029069 HotDog domain AMK01_RS17890 b3234f2f133a87272b2b92e847ba825e 151 Pfam PF03061 Thioesterase superfamily 32 118 3.4E-17 T 14-09-2016 IPR006683 Thioesterase domain AMK01_RS17890 b3234f2f133a87272b2b92e847ba825e 151 PIRSF PIRSF003230 9 150 7.6E-43 T 14-09-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMK01_RS17890 b3234f2f133a87272b2b92e847ba825e 151 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 17 142 9.4E-49 T 14-09-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- AMK01_RS17890 b3234f2f133a87272b2b92e847ba825e 151 PANTHER PTHR31793:SF9 22 146 3.7E-38 T 14-09-2016 AMK01_RS17890 b3234f2f133a87272b2b92e847ba825e 151 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 22 130 4.6E-29 T 14-09-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMK01_RS17890 b3234f2f133a87272b2b92e847ba825e 151 SUPERFAMILY SSF54637 17 144 5.15E-35 T 14-09-2016 IPR029069 HotDog domain AMK01_RS16175 3558762f3f1225825316e4a00699c451 384 Pfam PF14130 Domain of unknown function (DUF4297) 46 250 8.0E-33 T 14-09-2016 IPR025382 Domain of unknown function DUF4297 AMK01_RS01460 823e0e92d4f9eb529778499926b6840d 327 Gene3D G3DSA:1.20.1260.10 11 154 9.1E-26 T 14-09-2016 IPR012347 Ferritin-related AMK01_RS01460 823e0e92d4f9eb529778499926b6840d 327 PANTHER PTHR33531 16 178 1.4E-43 T 14-09-2016 AMK01_RS01460 823e0e92d4f9eb529778499926b6840d 327 SUPERFAMILY SSF47240 9 160 2.48E-32 T 14-09-2016 IPR009078 Ferritin-like superfamily AMK01_RS01460 823e0e92d4f9eb529778499926b6840d 327 PANTHER PTHR33531:SF4 16 178 1.4E-43 T 14-09-2016 AMK01_RS01460 823e0e92d4f9eb529778499926b6840d 327 Pfam PF02915 Rubrerythrin 20 156 6.5E-35 T 14-09-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 AMK01_RS01460 823e0e92d4f9eb529778499926b6840d 327 PIRSF PIRSF035918 4 327 3.7E-182 T 14-09-2016 IPR017040 Uncharacterised conserved protein UCP035918 , rubrerythrin/DUF125-related AMK01_RS11770 fb3b913d5364ae02434f33bd1e987f73 297 PANTHER PTHR33711:SF4 1 282 3.7E-123 T 14-09-2016 AMK01_RS11770 fb3b913d5364ae02434f33bd1e987f73 297 PANTHER PTHR33711 1 282 3.7E-123 T 14-09-2016 AMK01_RS11770 fb3b913d5364ae02434f33bd1e987f73 297 SUPERFAMILY SSF49482 4 287 3.4E-82 T 14-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMK01_RS11770 fb3b913d5364ae02434f33bd1e987f73 297 Pfam PF04444 Catechol dioxygenase N terminus 22 91 5.0E-19 T 14-09-2016 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 AMK01_RS11770 fb3b913d5364ae02434f33bd1e987f73 297 Gene3D G3DSA:2.60.130.10 5 288 1.2E-87 T 14-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMK01_RS11770 fb3b913d5364ae02434f33bd1e987f73 297 Pfam PF00775 Dioxygenase 103 264 1.6E-40 T 14-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMK01_RS05250 39a8b16e3bf0cf473423cf4842c89601 282 PANTHER PTHR14194 1 280 6.2E-54 T 14-09-2016 AMK01_RS05250 39a8b16e3bf0cf473423cf4842c89601 282 Pfam PF13460 NAD(P)H-binding 7 179 2.7E-19 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05250 39a8b16e3bf0cf473423cf4842c89601 282 SUPERFAMILY SSF51735 4 238 6.71E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05250 39a8b16e3bf0cf473423cf4842c89601 282 PANTHER PTHR14194:SF73 1 280 6.2E-54 T 14-09-2016 AMK01_RS05250 39a8b16e3bf0cf473423cf4842c89601 282 Gene3D G3DSA:3.40.50.720 1 216 8.8E-33 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01590 300a31e45bd3015362f8200ebaa190a2 227 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 84 1.5E-21 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS01590 300a31e45bd3015362f8200ebaa190a2 227 Gene3D G3DSA:3.40.30.10 2 98 5.5E-33 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01590 300a31e45bd3015362f8200ebaa190a2 227 Gene3D G3DSA:1.20.1050.10 99 215 2.6E-25 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS01590 300a31e45bd3015362f8200ebaa190a2 227 SUPERFAMILY SSF47616 79 213 1.85E-29 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS01590 300a31e45bd3015362f8200ebaa190a2 227 SUPERFAMILY SSF52833 3 107 1.47E-28 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01590 300a31e45bd3015362f8200ebaa190a2 227 Pfam PF13410 Glutathione S-transferase, C-terminal domain 123 188 1.4E-9 T 14-09-2016 AMK01_RS01590 300a31e45bd3015362f8200ebaa190a2 227 PANTHER PTHR11260:SF238 4 206 4.5E-54 T 14-09-2016 AMK01_RS01590 300a31e45bd3015362f8200ebaa190a2 227 PANTHER PTHR11260 4 206 4.5E-54 T 14-09-2016 AMK01_RS02325 49240055efadc8e9d2f4eab404007edc 382 Gene3D G3DSA:3.20.20.70 6 381 1.6E-136 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS02325 49240055efadc8e9d2f4eab404007edc 382 SUPERFAMILY SSF51395 5 379 7.94E-96 T 14-09-2016 AMK01_RS02325 49240055efadc8e9d2f4eab404007edc 382 PANTHER PTHR10578:SF65 1 379 1.5E-139 T 14-09-2016 AMK01_RS02325 49240055efadc8e9d2f4eab404007edc 382 PANTHER PTHR10578 1 379 1.5E-139 T 14-09-2016 AMK01_RS02325 49240055efadc8e9d2f4eab404007edc 382 PIRSF PIRSF000138 1 382 7.4E-135 T 14-09-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AMK01_RS02325 49240055efadc8e9d2f4eab404007edc 382 Pfam PF01070 FMN-dependent dehydrogenase 16 378 5.5E-128 T 14-09-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 AMK01_RS02325 49240055efadc8e9d2f4eab404007edc 382 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 276 282 - T 14-09-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 Gene3D G3DSA:3.40.50.300 11 233 4.5E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 Gene3D G3DSA:3.40.50.300 260 506 1.1E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 SUPERFAMILY SSF52540 12 231 1.33E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 SUPERFAMILY SSF52540 264 497 6.47E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 PANTHER PTHR24220 14 386 7.8E-140 T 14-09-2016 AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 Pfam PF00005 ABC transporter 30 177 2.9E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 Pfam PF00005 ABC transporter 278 431 1.6E-16 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 PANTHER PTHR24220:SF416 14 386 7.8E-140 T 14-09-2016 AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 SMART SM00382 286 488 2.7E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS18830 f430ac28b075636b3fc8f57bb4ffcf1e 508 SMART SM00382 37 225 3.6E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01120 6ac266c2bfb4af971441db5bc71d3b1a 258 Gene3D G3DSA:3.20.20.70 9 245 2.9E-82 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS01120 6ac266c2bfb4af971441db5bc71d3b1a 258 PANTHER PTHR10889 13 254 2.9E-95 T 14-09-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK01_RS01120 6ac266c2bfb4af971441db5bc71d3b1a 258 PANTHER PTHR10889:SF3 13 254 2.9E-95 T 14-09-2016 AMK01_RS01120 6ac266c2bfb4af971441db5bc71d3b1a 258 SUPERFAMILY SSF51569 13 243 3.56E-75 T 14-09-2016 AMK01_RS01120 6ac266c2bfb4af971441db5bc71d3b1a 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 14 226 1.2E-64 T 14-09-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK01_RS01120 6ac266c2bfb4af971441db5bc71d3b1a 258 Pfam PF01791 DeoC/LacD family aldolase 17 208 1.9E-32 T 14-09-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK01_RS01120 6ac266c2bfb4af971441db5bc71d3b1a 258 PIRSF PIRSF001357 7 250 1.7E-71 T 14-09-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK01_RS01120 6ac266c2bfb4af971441db5bc71d3b1a 258 SMART SM01133 12 243 1.8E-71 T 14-09-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK01_RS17970 2c3c2c137d77d891bf93f73ace8bea5a 299 SUPERFAMILY SSF56300 52 298 3.01E-32 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS17970 2c3c2c137d77d891bf93f73ace8bea5a 299 PANTHER PTHR31302:SF6 9 298 6.1E-48 T 14-09-2016 AMK01_RS17970 2c3c2c137d77d891bf93f73ace8bea5a 299 Pfam PF00149 Calcineurin-like phosphoesterase 52 239 3.0E-9 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS17970 2c3c2c137d77d891bf93f73ace8bea5a 299 Gene3D G3DSA:3.60.21.10 52 252 2.0E-18 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS17970 2c3c2c137d77d891bf93f73ace8bea5a 299 PANTHER PTHR31302 9 298 6.1E-48 T 14-09-2016 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 Pfam PF13394 4Fe-4S single cluster domain 28 113 1.8E-6 T 14-09-2016 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 PIRSF PIRSF000370 4 242 1.6E-59 T 14-09-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 6 239 37.144 T 14-09-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 SUPERFAMILY SSF102114 29 119 2.62E-8 T 14-09-2016 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 Pfam PF04055 Radical SAM superfamily 30 118 3.5E-8 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 242 9.2E-117 T 14-09-2016 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 PANTHER PTHR11228 1 189 1.1E-37 T 14-09-2016 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 PANTHER PTHR11228:SF6 1 189 1.1E-37 T 14-09-2016 AMK01_RS19180 20377d2af1d13c38cdcd8a112112782b 242 Gene3D G3DSA:3.20.20.70 29 221 1.2E-9 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS15985 d3f52c4f38b2f7bb5df07c7242b87a65 166 Gene3D G3DSA:2.60.120.480 5 162 1.7E-52 T 14-09-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 AMK01_RS15985 d3f52c4f38b2f7bb5df07c7242b87a65 166 PANTHER PTHR21221 5 161 7.6E-37 T 14-09-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 AMK01_RS15985 d3f52c4f38b2f7bb5df07c7242b87a65 166 PIRSF PIRSF017306 4 156 7.2E-34 T 14-09-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 AMK01_RS15985 d3f52c4f38b2f7bb5df07c7242b87a65 166 Pfam PF04115 Ureidoglycolate lyase 4 161 4.1E-50 T 14-09-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 AMK01_RS15985 d3f52c4f38b2f7bb5df07c7242b87a65 166 SUPERFAMILY SSF51182 5 161 5.78E-53 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS15985 d3f52c4f38b2f7bb5df07c7242b87a65 166 Hamap MF_00616 Ureidoglycolate lyase [allA]. 3 163 42.811 T 14-09-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 AMK01_RS20285 2d4d84b5d6b696200c307728d2066129 55 Pfam PF04995 Heme exporter protein D (CcmD) 1 43 6.7E-15 T 14-09-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AMK01_RS20285 2d4d84b5d6b696200c307728d2066129 55 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 1 43 1.7E-10 T 14-09-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AMK01_RS06865 a13aacfee554b03655480b67a5856751 291 PANTHER PTHR30514 14 269 4.9E-37 T 14-09-2016 AMK01_RS06865 a13aacfee554b03655480b67a5856751 291 PANTHER PTHR30514:SF3 14 269 4.9E-37 T 14-09-2016 AMK01_RS06865 a13aacfee554b03655480b67a5856751 291 Gene3D G3DSA:3.40.50.10490 120 287 1.8E-22 T 14-09-2016 AMK01_RS06865 a13aacfee554b03655480b67a5856751 291 SUPERFAMILY SSF46689 17 93 7.88E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06865 a13aacfee554b03655480b67a5856751 291 Pfam PF01380 SIS domain 146 269 3.1E-23 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS06865 a13aacfee554b03655480b67a5856751 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 21 84 6.7E-8 T 14-09-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMK01_RS06865 a13aacfee554b03655480b67a5856751 291 Gene3D G3DSA:1.10.10.10 16 92 2.2E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06865 a13aacfee554b03655480b67a5856751 291 SUPERFAMILY SSF53697 120 272 1.05E-18 T 14-09-2016 AMK01_RS11585 7740d4525cdfcfb9df855bc624737aee 157 Pfam PF00578 AhpC/TSA family 6 133 2.3E-35 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS11585 7740d4525cdfcfb9df855bc624737aee 157 PIRSF PIRSF000239 1 157 1.3E-18 T 14-09-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMK01_RS11585 7740d4525cdfcfb9df855bc624737aee 157 Gene3D G3DSA:3.40.30.10 4 155 2.9E-46 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS11585 7740d4525cdfcfb9df855bc624737aee 157 SUPERFAMILY SSF52833 6 155 6.35E-47 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS11585 7740d4525cdfcfb9df855bc624737aee 157 PANTHER PTHR10681 1 152 6.5E-40 T 14-09-2016 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 278 297 1.6E-7 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 137 153 1.6E-7 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 63 84 1.6E-7 T 14-09-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 PANTHER PTHR30222 21 330 1.0E-61 T 14-09-2016 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 Gene3D G3DSA:3.40.190.10 36 146 2.6E-24 T 14-09-2016 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 Gene3D G3DSA:3.40.190.10 301 331 2.6E-24 T 14-09-2016 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 SUPERFAMILY SSF53850 35 358 5.18E-54 T 14-09-2016 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 PANTHER PTHR30222:SF5 21 330 1.0E-61 T 14-09-2016 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 Gene3D G3DSA:3.40.190.10 147 300 1.8E-25 T 14-09-2016 AMK01_RS18900 36726eee7f202aacb6527ad33840877a 386 Pfam PF13416 Bacterial extracellular solute-binding protein 58 332 1.2E-25 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 1.6E-70 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 SUPERFAMILY SSF82866 289 487 8.24E-45 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 SUPERFAMILY SSF82693 553 649 4.97E-13 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 Gene3D G3DSA:3.30.70.1430 556 645 2.4E-10 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 SUPERFAMILY SSF82693 267 321 6.07E-21 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 SUPERFAMILY SSF82693 135 181 6.07E-21 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PANTHER PTHR32063 1 1012 0.0 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 Gene3D G3DSA:1.10.3850.10 274 489 1.1E-54 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 Gene3D G3DSA:1.10.3850.10 797 1010 2.7E-51 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 SUPERFAMILY SSF82714 704 789 9.02E-15 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 Pfam PF00873 AcrB/AcrD/AcrF family 5 1008 9.0E-300 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 Gene3D G3DSA:3.30.70.1430 39 140 2.1E-26 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 PANTHER PTHR32063:SF21 1 1012 0.0 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 SUPERFAMILY SSF82693 39 129 3.14E-20 T 14-09-2016 AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 Gene3D G3DSA:3.30.2090.10 704 788 1.9E-14 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 Gene3D G3DSA:3.30.2090.10 181 265 1.6E-20 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 SUPERFAMILY SSF82714 182 266 2.09E-19 T 14-09-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK01_RS06660 369fd448cfcc8257f1bf824023c122bd 1039 SUPERFAMILY SSF82866 813 1009 3.92E-43 T 14-09-2016 AMK01_RS01470 59370e7c85b82df4b58e5d8547cbbc55 199 PANTHER PTHR39327:SF2 26 194 2.2E-40 T 14-09-2016 AMK01_RS01470 59370e7c85b82df4b58e5d8547cbbc55 199 PANTHER PTHR39327 26 194 2.2E-40 T 14-09-2016 AMK01_RS01470 59370e7c85b82df4b58e5d8547cbbc55 199 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 33 191 4.6E-67 T 14-09-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 PANTHER PTHR23083 293 308 1.4E-31 T 14-09-2016 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 PANTHER PTHR23083 81 87 1.4E-31 T 14-09-2016 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 PANTHER PTHR23083 343 605 1.4E-31 T 14-09-2016 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 Gene3D G3DSA:2.40.170.20 759 1239 4.2E-30 T 14-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 Pfam PF00593 TonB dependent receptor 1002 1237 5.6E-10 T 14-09-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 Pfam PF04773 FecR protein 71 164 4.0E-16 T 14-09-2016 IPR006860 FecR protein AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 Pfam PF14559 Tetratricopeptide repeat 462 514 7.9E-7 T 14-09-2016 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 Pfam PF13432 Tetratricopeptide repeat 520 565 0.0012 T 14-09-2016 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 SUPERFAMILY SSF48452 445 613 1.9E-24 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 SUPERFAMILY SSF48452 291 515 4.55E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 SMART SM00028 345 378 220.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 SMART SM00028 482 515 0.065 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 SMART SM00028 448 481 0.32 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 SMART SM00028 516 549 13.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 SMART SM00028 280 313 300.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 SUPERFAMILY SSF56935 721 1239 2.93E-32 T 14-09-2016 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 Gene3D G3DSA:1.25.40.10 358 465 1.2E-14 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS13815 15f2c4c2adcacd964b9ce86243603bf6 1239 Gene3D G3DSA:1.25.40.10 466 576 8.7E-20 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 Gene3D G3DSA:2.30.40.10 31 75 1.1E-11 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 SUPERFAMILY SSF51338 28 85 1.43E-10 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 PANTHER PTHR11271:SF6 30 428 3.5E-132 T 14-09-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 Gene3D G3DSA:3.20.20.140 76 374 1.5E-105 T 14-09-2016 AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 Pfam PF01979 Amidohydrolase family 67 429 3.0E-56 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 SUPERFAMILY SSF51338 347 431 2.09E-12 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 428 9.8E-174 T 14-09-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 SUPERFAMILY SSF51556 70 374 8.51E-93 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS15930 33e7fd506aa039d21d8c50a4e46c1b4f 436 PANTHER PTHR11271 30 428 3.5E-132 T 14-09-2016 AMK01_RS09650 ed828a879a8575ee6207775b66918a32 141 Pfam PF01230 HIT domain 16 112 1.6E-28 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AMK01_RS09650 ed828a879a8575ee6207775b66918a32 141 SUPERFAMILY SSF54197 4 140 2.94E-42 T 14-09-2016 IPR011146 HIT-like domain GO:0003824 AMK01_RS09650 ed828a879a8575ee6207775b66918a32 141 PRINTS PR00332 Histidine triad family signature 10 26 1.6E-19 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AMK01_RS09650 ed828a879a8575ee6207775b66918a32 141 PRINTS PR00332 Histidine triad family signature 31 49 1.6E-19 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AMK01_RS09650 ed828a879a8575ee6207775b66918a32 141 PRINTS PR00332 Histidine triad family signature 98 108 1.6E-19 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AMK01_RS09650 ed828a879a8575ee6207775b66918a32 141 Gene3D G3DSA:3.30.428.10 8 140 3.7E-39 T 14-09-2016 IPR011146 HIT-like domain GO:0003824 AMK01_RS09650 ed828a879a8575ee6207775b66918a32 141 PANTHER PTHR23089 1 113 6.8E-42 T 14-09-2016 IPR001310 Histidine triad (HIT) protein AMK01_RS06385 920789f5f89556fe106796677e3c79b8 736 PANTHER PTHR10569:SF1 272 343 1.2E-140 T 14-09-2016 AMK01_RS06385 920789f5f89556fe106796677e3c79b8 736 PANTHER PTHR10569:SF1 363 680 1.2E-140 T 14-09-2016 AMK01_RS06385 920789f5f89556fe106796677e3c79b8 736 SUPERFAMILY SSF48208 255 718 1.06E-93 T 14-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK01_RS06385 920789f5f89556fe106796677e3c79b8 736 PANTHER PTHR10569 272 343 1.2E-140 T 14-09-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK01_RS06385 920789f5f89556fe106796677e3c79b8 736 PANTHER PTHR10569 363 680 1.2E-140 T 14-09-2016 IPR010401 Glycogen debranching enzyme GO:0004134|GO:0004135|GO:0005980 KEGG: 00500+3.2.1.33+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK01_RS06385 920789f5f89556fe106796677e3c79b8 736 Pfam PF06202 Amylo-alpha-1,6-glucosidase 296 662 2.4E-8 T 14-09-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK01_RS06385 920789f5f89556fe106796677e3c79b8 736 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 40 234 3.8E-58 T 14-09-2016 IPR032856 Putative glycogen debranching enzyme, N-terminal AMK01_RS11475 e06125ece115b33ad84ea55159ce5cc5 347 Pfam PF04314 Protein of unknown function (DUF461) 228 336 3.0E-37 T 14-09-2016 IPR007410 DR1885-like metal-binding protein AMK01_RS11475 e06125ece115b33ad84ea55159ce5cc5 347 PANTHER PTHR36302 190 341 1.4E-32 T 14-09-2016 AMK01_RS11475 e06125ece115b33ad84ea55159ce5cc5 347 SUPERFAMILY SSF110087 211 344 1.96E-43 T 14-09-2016 IPR007410 DR1885-like metal-binding protein AMK01_RS11475 e06125ece115b33ad84ea55159ce5cc5 347 Pfam PF07987 Domain of unkown function (DUF1775) 24 169 3.8E-41 T 14-09-2016 IPR012533 GLE1, N-terminal, bacteria AMK01_RS11475 e06125ece115b33ad84ea55159ce5cc5 347 PANTHER PTHR36302:SF1 190 341 1.4E-32 T 14-09-2016 AMK01_RS07360 9867d2d8676d3e316a2130e23392e82d 328 Pfam PF09991 Predicted membrane protein (DUF2232) 20 306 4.3E-6 T 14-09-2016 IPR018710 Protein of unknown function DUF2232 AMK01_RS09765 17a0ed0af9a30a7f3aa429ff72dcfaff 809 PANTHER PTHR30619 70 610 7.6E-56 T 14-09-2016 AMK01_RS09765 17a0ed0af9a30a7f3aa429ff72dcfaff 809 Pfam PF13567 Domain of unknown function (DUF4131) 82 237 1.3E-11 T 14-09-2016 IPR025405 Domain of unknown function DUF4131 AMK01_RS09765 17a0ed0af9a30a7f3aa429ff72dcfaff 809 PANTHER PTHR30619:SF2 70 610 7.6E-56 T 14-09-2016 AMK01_RS09765 17a0ed0af9a30a7f3aa429ff72dcfaff 809 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 315 513 1.3E-17 T 14-09-2016 IPR004477 ComEC/Rec2-related protein AMK01_RS09765 17a0ed0af9a30a7f3aa429ff72dcfaff 809 Pfam PF03772 Competence protein 294 581 3.4E-54 T 14-09-2016 IPR004477 ComEC/Rec2-related protein AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 Gene3D G3DSA:3.40.50.1820 10 302 3.6E-68 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PIRSF PIRSF006431 4 318 1.9E-135 T 14-09-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 SUPERFAMILY SSF53474 4 300 4.67E-61 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PANTHER PTHR10992:SF860 214 315 1.9E-126 T 14-09-2016 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 110 124 8.4E-14 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 67 78 8.4E-14 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 41 49 8.4E-14 T 14-09-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 4.2E-5 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 4.2E-5 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 4.2E-5 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 13 315 1.0E-123 T 14-09-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 Pfam PF00561 alpha/beta hydrolase fold 42 298 1.8E-28 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PANTHER PTHR10992 1 178 1.9E-126 T 14-09-2016 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PANTHER PTHR10992 214 315 1.9E-126 T 14-09-2016 AMK01_RS07270 cca82f9e317291f148ec5d154748dfe4 320 PANTHER PTHR10992:SF860 1 178 1.9E-126 T 14-09-2016 AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 Gene3D G3DSA:3.40.50.720 5 249 7.7E-77 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.3E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.3E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.3E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.3E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.3E-41 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 SUPERFAMILY SSF51735 6 249 3.21E-74 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 3.6E-58 T 14-09-2016 AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 194 3.5E-4 T 14-09-2016 AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PANTHER PTHR24322 159 190 1.7E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PANTHER PTHR24322 9 142 1.7E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.4E-13 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.4E-13 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19970 ca3c8007787724923332a85d981786b5 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.4E-13 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12075 1451bd6e96940d3a8fbc27d9cfd6e35d 120 PANTHER PTHR35174 2 118 1.7E-29 T 14-09-2016 AMK01_RS12075 1451bd6e96940d3a8fbc27d9cfd6e35d 120 Pfam PF03795 YCII-related domain 1 114 7.8E-21 T 14-09-2016 IPR005545 YCII-related AMK01_RS12075 1451bd6e96940d3a8fbc27d9cfd6e35d 120 SUPERFAMILY SSF54909 1 114 8.85E-32 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS12075 1451bd6e96940d3a8fbc27d9cfd6e35d 120 Gene3D G3DSA:3.30.70.1060 1 115 1.9E-37 T 14-09-2016 AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 Gene3D G3DSA:1.10.10.10 3 85 1.9E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.6E-17 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 PANTHER PTHR30537:SF7 1 295 2.7E-146 T 14-09-2016 AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 Gene3D G3DSA:3.40.190.10 176 259 1.8E-18 T 14-09-2016 AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 SUPERFAMILY SSF46785 4 86 1.15E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 Gene3D G3DSA:3.40.190.10 90 175 2.4E-20 T 14-09-2016 AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 PANTHER PTHR30537 1 295 2.7E-146 T 14-09-2016 AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 Pfam PF03466 LysR substrate binding domain 87 292 4.2E-42 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS17240 581c7980c8738fcfde3c89eea5265da3 302 SUPERFAMILY SSF53850 88 295 5.25E-44 T 14-09-2016 AMK01_RS17275 c1a38a3c1be820fd29f8e9bef33f2b7d 392 SUPERFAMILY SSF111369 48 293 1.44E-64 T 14-09-2016 AMK01_RS17275 c1a38a3c1be820fd29f8e9bef33f2b7d 392 Gene3D G3DSA:2.40.50.100 167 200 1.7E-22 T 14-09-2016 AMK01_RS17275 c1a38a3c1be820fd29f8e9bef33f2b7d 392 Gene3D G3DSA:2.40.50.100 59 92 1.7E-22 T 14-09-2016 AMK01_RS17275 c1a38a3c1be820fd29f8e9bef33f2b7d 392 PANTHER PTHR30158:SF2 21 392 9.6E-121 T 14-09-2016 AMK01_RS17275 c1a38a3c1be820fd29f8e9bef33f2b7d 392 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 369 1.7E-89 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS17275 c1a38a3c1be820fd29f8e9bef33f2b7d 392 PANTHER PTHR30158 21 392 9.6E-121 T 14-09-2016 AMK01_RS17275 c1a38a3c1be820fd29f8e9bef33f2b7d 392 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 287 2.0E-15 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 PRINTS PR00502 NUDIX hydrolase family signature 38 52 1.1E-9 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 PRINTS PR00502 NUDIX hydrolase family signature 52 67 1.1E-9 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 Gene3D G3DSA:3.90.79.10 11 135 5.8E-39 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 Pfam PF00293 NUDIX domain 11 131 1.3E-21 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 PANTHER PTHR22769:SF35 6 133 6.2E-33 T 14-09-2016 AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 PANTHER PTHR22769 6 133 6.2E-33 T 14-09-2016 AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 TIGRFAM TIGR00586 mutt: mutator mutT protein 7 134 1.3E-30 T 14-09-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 SUPERFAMILY SSF55811 6 134 4.87E-41 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS19365 c88766d077a4634ca37aba504b667987 137 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 121 4.0E-56 T 14-09-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 Pfam PF01979 Amidohydrolase family 127 451 1.9E-77 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 ProSitePatterns PS00145 Urease active site. 319 335 - T 14-09-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 PANTHER PTHR22642:SF7 25 298 2.8E-255 T 14-09-2016 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 PANTHER PTHR22642:SF7 322 503 2.8E-255 T 14-09-2016 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 SUPERFAMILY SSF51556 483 570 2.6E-197 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 SUPERFAMILY SSF51556 131 434 2.6E-197 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 Hamap MF_01953 Urease subunit alpha [ureC]. 3 570 56.0 T 14-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 297 314 2.0E-33 T 14-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 336 352 2.0E-33 T 14-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 2.0E-33 T 14-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 2.0E-33 T 14-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 SUPERFAMILY SSF51338 4 179 1.06E-64 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 PANTHER PTHR22642 25 298 2.8E-255 T 14-09-2016 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 Gene3D G3DSA:2.30.40.10 69 138 9.4E-16 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 570 1.1E-297 T 14-09-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 PANTHER PTHR22642 322 503 2.8E-255 T 14-09-2016 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 ProSitePatterns PS01120 Urease nickel ligands signature. 129 142 - T 14-09-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 Gene3D G3DSA:3.20.20.140 139 431 8.7E-209 T 14-09-2016 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 Gene3D G3DSA:3.20.20.140 490 568 8.7E-209 T 14-09-2016 AMK01_RS16990 213b08dfade33be62bcbe707d7dcdc70 570 SUPERFAMILY SSF51338 425 479 1.05E-5 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 SMART SM00895 113 235 3.2E-17 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 Pfam PF07729 FCD domain 114 234 1.1E-22 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 Gene3D G3DSA:1.20.120.530 114 243 1.1E-22 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 SUPERFAMILY SSF46785 20 88 1.01E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 PANTHER PTHR11751 111 129 3.7E-26 T 14-09-2016 AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 PANTHER PTHR11751 22 91 3.7E-26 T 14-09-2016 AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 1.1E-17 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 Gene3D G3DSA:1.10.10.10 7 85 8.7E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 SUPERFAMILY SSF48008 114 240 4.45E-21 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 SMART SM00345 25 84 5.9E-15 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 7.5E-9 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS19095 1f8746dec96185d1c963d0e03f5783b8 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 7.5E-9 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS12050 528612dec9c8104abb3198d2835116fd 479 Pfam PF01565 FAD binding domain 56 189 1.9E-31 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS12050 528612dec9c8104abb3198d2835116fd 479 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 55 88 - T 14-09-2016 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 AMK01_RS12050 528612dec9c8104abb3198d2835116fd 479 Gene3D G3DSA:3.30.465.10 113 221 9.1E-18 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS12050 528612dec9c8104abb3198d2835116fd 479 Pfam PF08031 Berberine and berberine like 427 471 1.8E-15 T 14-09-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 AMK01_RS12050 528612dec9c8104abb3198d2835116fd 479 Gene3D G3DSA:3.30.43.10 45 112 1.9E-13 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK01_RS12050 528612dec9c8104abb3198d2835116fd 479 PANTHER PTHR11748 30 473 8.8E-105 T 14-09-2016 AMK01_RS12050 528612dec9c8104abb3198d2835116fd 479 SUPERFAMILY SSF56176 34 220 4.67E-55 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS12050 528612dec9c8104abb3198d2835116fd 479 PANTHER PTHR11748:SF86 30 473 8.8E-105 T 14-09-2016 AMK01_RS06185 94a990253ce894f2485989094acec96f 243 Pfam PF01925 Sulfite exporter TauE/SafE 9 238 1.2E-41 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS06185 94a990253ce894f2485989094acec96f 243 PANTHER PTHR30269 1 243 2.7E-67 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS06185 94a990253ce894f2485989094acec96f 243 PANTHER PTHR30269:SF5 1 243 2.7E-67 T 14-09-2016 AMK01_RS16620 5c2af0370203e68b425ca2b76f88b9df 327 Gene3D G3DSA:3.90.550.10 24 255 1.2E-22 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16620 5c2af0370203e68b425ca2b76f88b9df 327 Pfam PF00535 Glycosyl transferase family 2 26 178 3.5E-12 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS16620 5c2af0370203e68b425ca2b76f88b9df 327 PANTHER PTHR22916 24 323 1.8E-19 T 14-09-2016 AMK01_RS16620 5c2af0370203e68b425ca2b76f88b9df 327 SUPERFAMILY SSF53448 22 293 6.94E-33 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS11440 46853cbf1532f3d9cb9e0e801227274e 510 Pfam PF01039 Carboxyl transferase domain 27 508 1.7E-185 T 14-09-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS11440 46853cbf1532f3d9cb9e0e801227274e 510 PANTHER PTHR22855 1 510 1.1E-303 T 14-09-2016 AMK01_RS11440 46853cbf1532f3d9cb9e0e801227274e 510 Gene3D G3DSA:3.90.226.10 266 510 8.7E-98 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS11440 46853cbf1532f3d9cb9e0e801227274e 510 PANTHER PTHR22855:SF40 1 510 1.1E-303 T 14-09-2016 AMK01_RS11440 46853cbf1532f3d9cb9e0e801227274e 510 SUPERFAMILY SSF52096 4 249 6.59E-76 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS11440 46853cbf1532f3d9cb9e0e801227274e 510 SUPERFAMILY SSF52096 267 510 3.08E-88 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS11440 46853cbf1532f3d9cb9e0e801227274e 510 Gene3D G3DSA:3.90.226.10 2 251 1.7E-78 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 230 426 7.1E-43 T 14-09-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 Gene3D G3DSA:3.30.70.1170 155 215 1.5E-9 T 14-09-2016 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 SUPERFAMILY SSF53335 118 428 3.28E-64 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 PANTHER PTHR22807 119 427 5.0E-89 T 14-09-2016 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 301 313 2.2E-28 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 2.2E-28 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 207 221 2.2E-28 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 351 367 2.2E-28 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 236 246 2.2E-28 T 14-09-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 PANTHER PTHR22807:SF33 119 427 5.0E-89 T 14-09-2016 AMK01_RS01710 b518c33730b4dd8471c0222387e20e7a 429 Gene3D G3DSA:3.40.50.150 217 428 7.4E-51 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS09130 4f19eb5ea38719e099f84beddb783258 220 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 8 188 1.6E-30 T 14-09-2016 AMK01_RS09130 4f19eb5ea38719e099f84beddb783258 220 PANTHER PTHR11579:SF0 1 176 1.7E-27 T 14-09-2016 AMK01_RS09130 4f19eb5ea38719e099f84beddb783258 220 Gene3D G3DSA:3.40.50.150 10 215 2.9E-48 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS09130 4f19eb5ea38719e099f84beddb783258 220 PANTHER PTHR11579 1 176 1.7E-27 T 14-09-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AMK01_RS09130 4f19eb5ea38719e099f84beddb783258 220 SUPERFAMILY SSF53335 1 198 4.98E-37 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 6 286 55.67 T 14-09-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 9 285 1.1E-122 T 14-09-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 PANTHER PTHR19136 20 285 1.3E-108 T 14-09-2016 AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 141 169 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 Gene3D G3DSA:2.160.10.10 96 251 7.9E-57 T 14-09-2016 AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 SUPERFAMILY SSF51161 8 270 1.66E-69 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 Gene3D G3DSA:1.10.166.10 7 75 3.5E-28 T 14-09-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 PANTHER PTHR19136:SF52 20 285 1.3E-108 T 14-09-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 8 74 2.0E-24 T 14-09-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 182 217 1.0E-11 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS02295 2f8091c0258721186f3684b89206a888 286 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 173 1.4E-4 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS10605 64f86bbf35c71913590f34a479eddd10 419 Gene3D G3DSA:3.40.190.10 155 340 6.2E-27 T 14-09-2016 AMK01_RS10605 64f86bbf35c71913590f34a479eddd10 419 Gene3D G3DSA:3.40.190.10 27 154 1.4E-10 T 14-09-2016 AMK01_RS10605 64f86bbf35c71913590f34a479eddd10 419 PANTHER PTHR30061 1 414 2.9E-40 T 14-09-2016 AMK01_RS10605 64f86bbf35c71913590f34a479eddd10 419 SUPERFAMILY SSF53850 26 415 9.78E-52 T 14-09-2016 AMK01_RS10605 64f86bbf35c71913590f34a479eddd10 419 Pfam PF13416 Bacterial extracellular solute-binding protein 43 354 6.4E-24 T 14-09-2016 AMK01_RS13030 56356a6bb1a4b8f8c4ad4edf4de9310a 139 Gene3D G3DSA:3.90.79.10 7 126 2.0E-26 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS13030 56356a6bb1a4b8f8c4ad4edf4de9310a 139 SUPERFAMILY SSF55811 5 119 1.76E-28 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS13030 56356a6bb1a4b8f8c4ad4edf4de9310a 139 PRINTS PR00502 NUDIX hydrolase family signature 31 45 1.3E-7 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS13030 56356a6bb1a4b8f8c4ad4edf4de9310a 139 PRINTS PR00502 NUDIX hydrolase family signature 45 60 1.3E-7 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS13030 56356a6bb1a4b8f8c4ad4edf4de9310a 139 PANTHER PTHR22769 2 111 4.4E-20 T 14-09-2016 AMK01_RS13030 56356a6bb1a4b8f8c4ad4edf4de9310a 139 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK01_RS13030 56356a6bb1a4b8f8c4ad4edf4de9310a 139 Pfam PF00293 NUDIX domain 4 115 5.3E-22 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS03235 d2c6e9f58005fbb1dc16983c37b9150b 528 PANTHER PTHR30290 1 527 1.7E-105 T 14-09-2016 AMK01_RS03235 d2c6e9f58005fbb1dc16983c37b9150b 528 Gene3D G3DSA:3.10.105.10 289 491 6.9E-46 T 14-09-2016 AMK01_RS03235 d2c6e9f58005fbb1dc16983c37b9150b 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 416 1.0E-85 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS03235 d2c6e9f58005fbb1dc16983c37b9150b 528 PIRSF PIRSF002741 1 521 1.0E-96 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK01_RS03235 d2c6e9f58005fbb1dc16983c37b9150b 528 Gene3D G3DSA:3.40.190.10 138 288 2.3E-44 T 14-09-2016 AMK01_RS03235 d2c6e9f58005fbb1dc16983c37b9150b 528 SUPERFAMILY SSF53850 40 515 1.63E-117 T 14-09-2016 AMK01_RS21015 7163ca79645a7f5ccc62a7fed05edcdc 202 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 42.357 T 14-09-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS21015 7163ca79645a7f5ccc62a7fed05edcdc 202 PANTHER PTHR11670:SF12 9 199 2.6E-119 T 14-09-2016 AMK01_RS21015 7163ca79645a7f5ccc62a7fed05edcdc 202 Gene3D G3DSA:3.20.19.10 3 194 4.0E-49 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK01_RS21015 7163ca79645a7f5ccc62a7fed05edcdc 202 PANTHER PTHR11670 9 199 2.6E-119 T 14-09-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS21015 7163ca79645a7f5ccc62a7fed05edcdc 202 SUPERFAMILY SSF52016 1 191 1.47E-58 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK01_RS21015 7163ca79645a7f5ccc62a7fed05edcdc 202 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 1.7E-77 T 14-09-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS21015 7163ca79645a7f5ccc62a7fed05edcdc 202 Pfam PF00694 Aconitase C-terminal domain 1 123 3.5E-38 T 14-09-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK01_RS10950 95b58cbdc02b837fbe114a648caab172 216 SMART SM00028 86 119 100.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10950 95b58cbdc02b837fbe114a648caab172 216 SMART SM00028 52 85 22.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10950 95b58cbdc02b837fbe114a648caab172 216 SMART SM00028 121 154 36.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS10950 95b58cbdc02b837fbe114a648caab172 216 SUPERFAMILY SSF48452 34 188 1.78E-20 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10950 95b58cbdc02b837fbe114a648caab172 216 PANTHER PTHR23083 1 185 3.2E-16 T 14-09-2016 AMK01_RS10950 95b58cbdc02b837fbe114a648caab172 216 Gene3D G3DSA:1.25.40.10 1 185 1.2E-22 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS10950 95b58cbdc02b837fbe114a648caab172 216 Pfam PF13181 Tetratricopeptide repeat 57 84 0.038 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 TIGRFAM TIGR01178 ade: adenine deaminase 19 564 7.6E-176 T 14-09-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 Pfam PF01979 Amidohydrolase family 66 349 3.0E-26 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 Hamap MF_01518 Adenine deaminase [ade]. 19 565 37.687 T 14-09-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 Pfam PF13382 Adenine deaminase C-terminal domain 395 561 1.0E-66 T 14-09-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 PANTHER PTHR11113 388 560 1.9E-167 T 14-09-2016 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 PANTHER PTHR11113 5 349 1.9E-167 T 14-09-2016 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 Gene3D G3DSA:2.30.40.10 264 348 1.8E-9 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 Gene3D G3DSA:2.30.40.10 18 110 3.4E-19 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 SUPERFAMILY SSF51556 70 316 6.81E-31 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS15755 916567842b7dba07d108c52752510e18 565 PANTHER PTHR11113:SF2 388 560 1.9E-167 T 14-09-2016 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 PANTHER PTHR11113:SF2 5 349 1.9E-167 T 14-09-2016 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 SUPERFAMILY SSF51338 17 70 5.32E-12 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS15755 916567842b7dba07d108c52752510e18 565 SUPERFAMILY SSF51338 316 347 5.32E-12 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 PRINTS PR01036 Tetracycline resistance protein TetB signature 419 438 2.6E-5 T 14-09-2016 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 PRINTS PR01036 Tetracycline resistance protein TetB signature 33 57 2.6E-5 T 14-09-2016 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 PRINTS PR01036 Tetracycline resistance protein TetB signature 154 178 2.6E-5 T 14-09-2016 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 Gene3D G3DSA:1.20.1250.20 500 523 4.3E-20 T 14-09-2016 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 Gene3D G3DSA:1.20.1250.20 24 204 2.4E-27 T 14-09-2016 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 Gene3D G3DSA:1.20.1250.20 281 455 4.3E-20 T 14-09-2016 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 PANTHER PTHR23501 5 524 2.5E-198 T 14-09-2016 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 28 514 1.1E-133 T 14-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 SUPERFAMILY SSF103473 495 521 1.19E-63 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 SUPERFAMILY SSF103473 24 219 1.19E-63 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 SUPERFAMILY SSF103473 268 438 1.19E-63 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 PANTHER PTHR23501:SF51 5 524 2.5E-198 T 14-09-2016 AMK01_RS18855 b1028f8d92da0b5b6b836d2ce39073cc 533 Pfam PF07690 Major Facilitator Superfamily 35 428 2.1E-43 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS00650 f9105b79e0748406a20dc2cb3907a03a 240 PANTHER PTHR37314 1 228 1.2E-39 T 14-09-2016 AMK01_RS00650 f9105b79e0748406a20dc2cb3907a03a 240 PANTHER PTHR37314:SF1 1 228 1.2E-39 T 14-09-2016 AMK01_RS00650 f9105b79e0748406a20dc2cb3907a03a 240 Pfam PF06912 Protein of unknown function (DUF1275) 23 212 1.2E-30 T 14-09-2016 IPR010699 Protein of unknown function DUF1275 AMK01_RS19080 2efa5dfe34758b1cdaf6e33ab0673461 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 1.1E-44 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS19080 2efa5dfe34758b1cdaf6e33ab0673461 316 PANTHER PTHR32196 13 311 2.2E-108 T 14-09-2016 AMK01_RS19080 2efa5dfe34758b1cdaf6e33ab0673461 316 PANTHER PTHR32196:SF37 13 311 2.2E-108 T 14-09-2016 AMK01_RS14490 0d4a4c9dfba1cf3c904c8424478007fa 83 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 76 1.3E-28 T 14-09-2016 IPR018680 Protein of unknown function DUF2164 AMK01_RS07235 8120a48e15e101771dbd5cafdc24aeca 182 SUPERFAMILY SSF102405 3 162 1.13E-52 T 14-09-2016 AMK01_RS07235 8120a48e15e101771dbd5cafdc24aeca 182 Pfam PF03641 Possible lysine decarboxylase 28 158 1.4E-41 T 14-09-2016 IPR031100 LOG family AMK01_RS07235 8120a48e15e101771dbd5cafdc24aeca 182 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 6 161 2.6E-49 T 14-09-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMK01_RS07235 8120a48e15e101771dbd5cafdc24aeca 182 PANTHER PTHR31223:SF0 5 170 1.4E-65 T 14-09-2016 AMK01_RS07235 8120a48e15e101771dbd5cafdc24aeca 182 PANTHER PTHR31223 5 170 1.4E-65 T 14-09-2016 AMK01_RS07235 8120a48e15e101771dbd5cafdc24aeca 182 Gene3D G3DSA:3.40.50.450 2 161 1.7E-55 T 14-09-2016 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 Pfam PF01411 tRNA synthetases class II (A) 6 553 4.1E-218 T 14-09-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 PANTHER PTHR11777:SF9 1 883 0.0 T 14-09-2016 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 884 198.747 T 14-09-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 865 9.0E-291 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 SUPERFAMILY SSF55681 4 245 4.47E-107 T 14-09-2016 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 SUPERFAMILY SSF50447 451 550 6.56E-20 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 SUPERFAMILY SSF101353 246 459 6.02E-60 T 14-09-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 Pfam PF02272 DHHA1 domain 810 878 9.4E-15 T 14-09-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 2.0E-31 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 2.0E-31 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 2.0E-31 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 296 309 2.0E-31 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 272 288 2.0E-31 T 14-09-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 PANTHER PTHR11777 1 883 0.0 T 14-09-2016 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 SMART SM00863 651 704 2.8E-19 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 SUPERFAMILY SSF55186 550 724 4.06E-49 T 14-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 704 2.0E-16 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK01_RS11895 23c140ffb3cc2f738759656b8babff99 884 Gene3D G3DSA:3.30.930.10 4 241 1.0E-112 T 14-09-2016 AMK01_RS14535 144005d53edba61263ac93f22915be9c 155 SUPERFAMILY SSF50341 8 149 1.03E-38 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS14535 144005d53edba61263ac93f22915be9c 155 PANTHER PTHR22617 5 150 1.1E-43 T 14-09-2016 AMK01_RS14535 144005d53edba61263ac93f22915be9c 155 Gene3D G3DSA:2.40.50.180 53 87 1.7E-9 T 14-09-2016 AMK01_RS14535 144005d53edba61263ac93f22915be9c 155 Gene3D G3DSA:2.30.30.40 88 137 8.0E-7 T 14-09-2016 AMK01_RS14535 144005d53edba61263ac93f22915be9c 155 SMART SM00260 13 147 1.2E-34 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS14535 144005d53edba61263ac93f22915be9c 155 Pfam PF01584 CheW-like domain 15 149 1.7E-35 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS05500 a2f4d33a190773a21473955a619b9578 138 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 12 135 1.0E-23 T 14-09-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AMK01_RS14140 66835350529cc02a0d27cc69b37bdea3 334 Gene3D G3DSA:3.40.50.1360 65 321 1.4E-69 T 14-09-2016 AMK01_RS14140 66835350529cc02a0d27cc69b37bdea3 334 Gene3D G3DSA:1.10.10.10 14 57 4.3E-4 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14140 66835350529cc02a0d27cc69b37bdea3 334 PANTHER PTHR34294 1 328 2.0E-75 T 14-09-2016 AMK01_RS14140 66835350529cc02a0d27cc69b37bdea3 334 SUPERFAMILY SSF88659 20 57 8.41E-6 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS14140 66835350529cc02a0d27cc69b37bdea3 334 SUPERFAMILY SSF100950 72 320 1.51E-63 T 14-09-2016 AMK01_RS14140 66835350529cc02a0d27cc69b37bdea3 334 Pfam PF04198 Putative sugar-binding domain 68 320 1.3E-62 T 14-09-2016 IPR007324 Sugar-binding domain, putative GO:0030246 AMK01_RS02990 052570e0e0d5edf14359f5ce2478df86 400 Gene3D G3DSA:1.20.1250.20 14 191 2.3E-17 T 14-09-2016 AMK01_RS02990 052570e0e0d5edf14359f5ce2478df86 400 Pfam PF07690 Major Facilitator Superfamily 22 269 1.1E-12 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS02990 052570e0e0d5edf14359f5ce2478df86 400 SUPERFAMILY SSF103473 13 396 2.22E-28 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS02990 052570e0e0d5edf14359f5ce2478df86 400 Gene3D G3DSA:1.20.1250.20 289 392 1.2E-5 T 14-09-2016 AMK01_RS20015 60782b42303f5a06e2aea0b6f16a76bb 387 Gene3D G3DSA:3.40.50.300 60 212 8.8E-19 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20015 60782b42303f5a06e2aea0b6f16a76bb 387 PANTHER PTHR12169 22 386 7.1E-144 T 14-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 AMK01_RS20015 60782b42303f5a06e2aea0b6f16a76bb 387 Pfam PF03969 AFG1-like ATPase 21 378 2.0E-127 T 14-09-2016 IPR005654 ATPase, AFG1-like GO:0005524 AMK01_RS20015 60782b42303f5a06e2aea0b6f16a76bb 387 SUPERFAMILY SSF52540 67 216 7.57E-15 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20615 a0665e13bdda63cda3050ce77f9c194d 61 SUPERFAMILY SSF57829 1 55 1.28E-20 T 14-09-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMK01_RS20615 a0665e13bdda63cda3050ce77f9c194d 61 Pfam PF01783 Ribosomal L32p protein family 2 56 2.8E-23 T 14-09-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK01_RS20615 a0665e13bdda63cda3050ce77f9c194d 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.9E-24 T 14-09-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK01_RS20615 a0665e13bdda63cda3050ce77f9c194d 61 PANTHER PTHR35534 1 61 2.6E-29 T 14-09-2016 AMK01_RS20615 a0665e13bdda63cda3050ce77f9c194d 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.743 T 14-09-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK01_RS09400 3a5a0bd4a81e1445429dae1727a34d1c 671 PANTHER PTHR11219 136 458 6.1E-17 T 14-09-2016 AMK01_RS09400 3a5a0bd4a81e1445429dae1727a34d1c 671 PANTHER PTHR11219 1 14 6.1E-17 T 14-09-2016 AMK01_RS09400 3a5a0bd4a81e1445429dae1727a34d1c 671 Pfam PF15648 Restriction endonuclease fold toxin 5 548 629 4.6E-16 T 14-09-2016 IPR028904 Tox-REase-5 domain AMK01_RS09400 3a5a0bd4a81e1445429dae1727a34d1c 671 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 380 457 1.5E-22 T 14-09-2016 IPR022385 Rhs repeat-associated core GO:0097264 AMK01_RS09400 3a5a0bd4a81e1445429dae1727a34d1c 671 PANTHER PTHR11219:SF46 136 458 6.1E-17 T 14-09-2016 AMK01_RS09400 3a5a0bd4a81e1445429dae1727a34d1c 671 PANTHER PTHR11219:SF46 1 14 6.1E-17 T 14-09-2016 AMK01_RS10700 a7c22228bb453a41fe7acc88cc8cdc51 320 Gene3D G3DSA:3.40.50.2300 142 305 4.4E-49 T 14-09-2016 AMK01_RS10700 a7c22228bb453a41fe7acc88cc8cdc51 320 PANTHER PTHR32196:SF20 50 281 9.9E-143 T 14-09-2016 AMK01_RS10700 a7c22228bb453a41fe7acc88cc8cdc51 320 Pfam PF13407 Periplasmic binding protein domain 32 288 2.2E-47 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS10700 a7c22228bb453a41fe7acc88cc8cdc51 320 PANTHER PTHR32196 50 281 9.9E-143 T 14-09-2016 AMK01_RS10700 a7c22228bb453a41fe7acc88cc8cdc51 320 SUPERFAMILY SSF53822 26 305 1.26E-73 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS10700 a7c22228bb453a41fe7acc88cc8cdc51 320 Gene3D G3DSA:3.40.50.2300 27 141 7.8E-27 T 14-09-2016 AMK01_RS10480 a1fabafec2c3f3e96f206ab26977653d 159 Pfam PF11158 Protein of unknown function (DUF2938) 9 157 4.7E-66 T 14-09-2016 IPR021329 Protein of unknown function DUF2938 AMK01_RS09985 b4bf2cefb6fe0861c5242a7a7318e801 558 Pfam PF02538 Hydantoinase B/oxoprolinase 10 520 2.3E-140 T 14-09-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 AMK01_RS09985 b4bf2cefb6fe0861c5242a7a7318e801 558 PANTHER PTHR11365 10 526 2.0E-70 T 14-09-2016 AMK01_RS07015 e5567f56a41db97ac1eb2c06a8eb1354 1506 Pfam PF13313 Domain of unknown function (DUF4082) 1351 1496 5.7E-55 T 14-09-2016 IPR025141 Domain of unknown function DUF4082 AMK01_RS07015 e5567f56a41db97ac1eb2c06a8eb1354 1506 Pfam PF13313 Domain of unknown function (DUF4082) 1093 1238 2.3E-51 T 14-09-2016 IPR025141 Domain of unknown function DUF4082 AMK01_RS07015 e5567f56a41db97ac1eb2c06a8eb1354 1506 Pfam PF13313 Domain of unknown function (DUF4082) 836 981 3.5E-49 T 14-09-2016 IPR025141 Domain of unknown function DUF4082 AMK01_RS07015 e5567f56a41db97ac1eb2c06a8eb1354 1506 SUPERFAMILY SSF81296 735 818 7.0E-15 T 14-09-2016 IPR014756 Immunoglobulin E-set AMK01_RS07015 e5567f56a41db97ac1eb2c06a8eb1354 1506 Gene3D G3DSA:2.60.40.650 736 819 4.9E-11 T 14-09-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 AMK01_RS02215 53dbefb98f6f6a20306e56645ae40440 258 PANTHER PTHR24220:SF497 23 255 2.3E-136 T 14-09-2016 AMK01_RS02215 53dbefb98f6f6a20306e56645ae40440 258 Gene3D G3DSA:3.40.50.300 16 249 5.0E-69 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02215 53dbefb98f6f6a20306e56645ae40440 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS02215 53dbefb98f6f6a20306e56645ae40440 258 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 22 258 5.0E-115 T 14-09-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AMK01_RS02215 53dbefb98f6f6a20306e56645ae40440 258 SUPERFAMILY SSF52540 22 254 3.08E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02215 53dbefb98f6f6a20306e56645ae40440 258 Pfam PF00005 ABC transporter 38 183 9.2E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS02215 53dbefb98f6f6a20306e56645ae40440 258 PANTHER PTHR24220 23 255 2.3E-136 T 14-09-2016 AMK01_RS02215 53dbefb98f6f6a20306e56645ae40440 258 SMART SM00382 46 239 1.4E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 ProSitePatterns PS01057 SAICAR synthetase signature 1. 91 105 - T 14-09-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 Pfam PF01259 SAICAR synthetase 14 266 3.8E-80 T 14-09-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 ProSitePatterns PS01058 SAICAR synthetase signature 2. 197 205 - T 14-09-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 PANTHER PTHR11609:SF9 5 310 1.1E-106 T 14-09-2016 AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 SUPERFAMILY SSF56104 5 292 1.77E-88 T 14-09-2016 AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 12 289 22.275 T 14-09-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 Gene3D G3DSA:3.30.200.20 4 104 9.7E-36 T 14-09-2016 AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 Gene3D G3DSA:3.30.470.20 105 233 6.5E-45 T 14-09-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK01_RS17605 bcd7400b469fc25c518642a74bea2d06 314 PANTHER PTHR11609 5 310 1.1E-106 T 14-09-2016 AMK01_RS13260 3f6691b4c14df701a84bc119135eded1 481 SMART SM00044 258 462 4.7E-11 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13260 3f6691b4c14df701a84bc119135eded1 481 Gene3D G3DSA:3.30.70.1230 309 445 1.2E-35 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13260 3f6691b4c14df701a84bc119135eded1 481 PANTHER PTHR11920 286 447 7.0E-19 T 14-09-2016 AMK01_RS13260 3f6691b4c14df701a84bc119135eded1 481 PANTHER PTHR11920:SF341 286 447 7.0E-19 T 14-09-2016 AMK01_RS13260 3f6691b4c14df701a84bc119135eded1 481 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 309 443 1.2E-25 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13260 3f6691b4c14df701a84bc119135eded1 481 SUPERFAMILY SSF55073 307 479 2.51E-42 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS17250 f78a95529d3d9a4b70723a4d8d9436c7 199 PANTHER PTHR10429 22 199 3.3E-65 T 14-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK01_RS17250 f78a95529d3d9a4b70723a4d8d9436c7 199 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 22 195 30.224 T 14-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK01_RS17250 f78a95529d3d9a4b70723a4d8d9436c7 199 PANTHER PTHR10429:SF0 22 199 3.3E-65 T 14-09-2016 AMK01_RS17250 f78a95529d3d9a4b70723a4d8d9436c7 199 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 24 191 5.0E-59 T 14-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK01_RS17250 f78a95529d3d9a4b70723a4d8d9436c7 199 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 23 195 1.6E-50 T 14-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK01_RS17250 f78a95529d3d9a4b70723a4d8d9436c7 199 Gene3D G3DSA:3.10.300.10 22 197 2.1E-60 T 14-09-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK01_RS17250 f78a95529d3d9a4b70723a4d8d9436c7 199 SUPERFAMILY SSF50486 22 197 2.82E-59 T 14-09-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AMK01_RS06525 1692e47de87b5802b18a2d712ac8f370 203 SUPERFAMILY SSF52833 1 84 1.81E-27 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06525 1692e47de87b5802b18a2d712ac8f370 203 Gene3D G3DSA:1.20.1050.10 85 194 5.2E-29 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS06525 1692e47de87b5802b18a2d712ac8f370 203 SUPERFAMILY SSF47616 71 194 6.0E-29 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS06525 1692e47de87b5802b18a2d712ac8f370 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 9.7E-19 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS06525 1692e47de87b5802b18a2d712ac8f370 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 123 184 1.1E-11 T 14-09-2016 AMK01_RS06525 1692e47de87b5802b18a2d712ac8f370 203 Gene3D G3DSA:3.40.30.10 1 84 7.1E-31 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06525 1692e47de87b5802b18a2d712ac8f370 203 PANTHER PTHR11260 1 191 1.3E-52 T 14-09-2016 AMK01_RS10220 e0235fab728539e79a5e4219bdc44259 254 Gene3D G3DSA:3.60.40.10 23 243 2.4E-6 T 14-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK01_RS10220 e0235fab728539e79a5e4219bdc44259 254 SUPERFAMILY SSF81606 20 251 2.88E-9 T 14-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK01_RS10220 e0235fab728539e79a5e4219bdc44259 254 Pfam PF13672 Protein phosphatase 2C 12 234 4.3E-43 T 14-09-2016 AMK01_RS12460 a5345d2ec1d39a940e4db8c9a1cbf074 340 SUPERFAMILY SSF56935 57 340 7.12E-18 T 14-09-2016 AMK01_RS12460 a5345d2ec1d39a940e4db8c9a1cbf074 340 Gene3D G3DSA:2.40.160.10 57 332 9.8E-29 T 14-09-2016 IPR023614 Porin domain AMK01_RS12460 a5345d2ec1d39a940e4db8c9a1cbf074 340 Pfam PF02530 Porin subfamily 24 325 2.1E-93 T 14-09-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 AMK01_RS14355 08130f4218769ed9a3c10f4a6cf12b9d 364 SMART SM00244 78 247 1.9E-25 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS14355 08130f4218769ed9a3c10f4a6cf12b9d 364 Pfam PF01145 SPFH domain / Band 7 family 82 262 2.1E-30 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS14355 08130f4218769ed9a3c10f4a6cf12b9d 364 PANTHER PTHR10264 1 362 3.5E-97 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS14355 08130f4218769ed9a3c10f4a6cf12b9d 364 TIGRFAM TIGR01933 hflK: HflK protein 80 347 4.6E-82 T 14-09-2016 IPR010201 HflK GO:0016021 AMK01_RS14355 08130f4218769ed9a3c10f4a6cf12b9d 364 SUPERFAMILY SSF117892 110 254 1.7E-23 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS14355 08130f4218769ed9a3c10f4a6cf12b9d 364 Pfam PF12221 Bacterial membrane protein N terminal 1 58 1.1E-7 T 14-09-2016 IPR020980 Menbrane protein HflK, N-terminal AMK01_RS14355 08130f4218769ed9a3c10f4a6cf12b9d 364 PANTHER PTHR10264:SF51 1 362 3.5E-97 T 14-09-2016 IPR010201 HflK GO:0016021 AMK01_RS20870 ea4629e21359719d7d652e87f4aa2906 105 SUPERFAMILY SSF141091 1 102 3.79E-37 T 14-09-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AMK01_RS20870 ea4629e21359719d7d652e87f4aa2906 105 PANTHER PTHR21349 1 102 8.5E-43 T 14-09-2016 AMK01_RS20870 ea4629e21359719d7d652e87f4aa2906 105 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.257 T 14-09-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20870 ea4629e21359719d7d652e87f4aa2906 105 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 1.2E-35 T 14-09-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS20870 ea4629e21359719d7d652e87f4aa2906 105 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.9E-40 T 14-09-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AMK01_RS19000 9765473609a7ac493107843668437e27 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 9 183 1.2E-18 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS19000 9765473609a7ac493107843668437e27 229 PANTHER PTHR18901 5 221 5.5E-55 T 14-09-2016 AMK01_RS19000 9765473609a7ac493107843668437e27 229 Gene3D G3DSA:1.10.150.240 22 87 2.7E-8 T 14-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK01_RS19000 9765473609a7ac493107843668437e27 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 184 2.7E-29 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS19000 9765473609a7ac493107843668437e27 229 Gene3D G3DSA:3.40.50.1000 7 21 2.4E-41 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS19000 9765473609a7ac493107843668437e27 229 Gene3D G3DSA:3.40.50.1000 89 221 2.4E-41 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS19000 9765473609a7ac493107843668437e27 229 PANTHER PTHR18901:SF9 5 221 5.5E-55 T 14-09-2016 AMK01_RS19000 9765473609a7ac493107843668437e27 229 SUPERFAMILY SSF56784 6 220 9.95E-55 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 Pfam PF00107 Zinc-binding dehydrogenase 157 272 2.7E-29 T 14-09-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 PANTHER PTHR11695:SF610 21 333 1.1E-137 T 14-09-2016 AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 SUPERFAMILY SSF50129 7 144 8.52E-36 T 14-09-2016 IPR011032 GroES-like AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 Gene3D G3DSA:3.40.50.720 152 268 3.8E-31 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 SMART SM00829 16 329 1.8E-52 T 14-09-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 SUPERFAMILY SSF51735 118 293 3.71E-48 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 PANTHER PTHR11695 21 333 1.1E-137 T 14-09-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 Gene3D G3DSA:3.90.180.10 6 151 1.1E-45 T 14-09-2016 IPR011032 GroES-like AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 93 3.7E-9 T 14-09-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK01_RS05855 de81dbb7c26e7abe4c116f971ac3cacf 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 7 331 2.0E-143 T 14-09-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 9 225 39.836 T 14-09-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 SMART SM00987 54 214 1.6E-38 T 14-09-2016 AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 SUPERFAMILY SSF52141 7 226 1.44E-90 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 SMART SM00986 54 214 1.6E-38 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 10 218 2.4E-80 T 14-09-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 Pfam PF03167 Uracil DNA glycosylase superfamily 59 213 1.2E-22 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 Gene3D G3DSA:3.40.470.10 6 226 2.0E-98 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 62 71 - T 14-09-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 AMK01_RS16725 59362aef1f5f096933bd7972440b10e0 233 PANTHER PTHR11264 4 232 1.7E-129 T 14-09-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMK01_RS05715 eb6f7e32a2aa8cf782c58af7ec9fac98 211 PANTHER PTHR12843:SF4 41 209 5.0E-52 T 14-09-2016 AMK01_RS05715 eb6f7e32a2aa8cf782c58af7ec9fac98 211 PANTHER PTHR12843 41 209 5.0E-52 T 14-09-2016 IPR026635 Protein-lysine N-methyltransferase Efm4 GO:0008168 AMK01_RS05715 eb6f7e32a2aa8cf782c58af7ec9fac98 211 Pfam PF13649 Methyltransferase domain 57 109 1.4E-8 T 14-09-2016 AMK01_RS05715 eb6f7e32a2aa8cf782c58af7ec9fac98 211 Gene3D G3DSA:3.40.50.150 14 109 5.3E-13 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05715 eb6f7e32a2aa8cf782c58af7ec9fac98 211 SUPERFAMILY SSF53335 7 109 4.74E-15 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 SUPERFAMILY SSF46689 64 114 2.91E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 Gene3D G3DSA:3.20.80.10 132 282 1.7E-50 T 14-09-2016 IPR011256 Regulatory factor, effector binding domain AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 PANTHER PTHR40055 30 283 1.3E-38 T 14-09-2016 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 Pfam PF12833 Helix-turn-helix domain 34 112 6.6E-17 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 6.3E-6 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 6.3E-6 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 SMART SM00342 28 111 8.4E-21 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 SUPERFAMILY SSF55136 132 282 5.76E-38 T 14-09-2016 IPR011256 Regulatory factor, effector binding domain AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 PANTHER PTHR40055:SF1 30 283 1.3E-38 T 14-09-2016 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 SMART SM00871 131 283 9.5E-43 T 14-09-2016 IPR010499 Bacterial transcription activator, effector binding AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 Gene3D G3DSA:1.10.10.60 10 64 2.0E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 Gene3D G3DSA:1.10.10.60 65 124 5.0E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 Pfam PF06445 GyrI-like small molecule binding domain 132 282 7.9E-38 T 14-09-2016 IPR029442 GyrI-like small molecule binding domain AMK01_RS11885 5f4ca7c0dba842ebcf342ab0383eb86e 283 SUPERFAMILY SSF46689 12 59 5.64E-7 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS00285 9301f016d67d59cbef0771ad1ba1c060 192 PANTHER PTHR26402:SF344 21 185 1.1E-53 T 14-09-2016 AMK01_RS00285 9301f016d67d59cbef0771ad1ba1c060 192 PANTHER PTHR26402 21 185 1.1E-53 T 14-09-2016 AMK01_RS00285 9301f016d67d59cbef0771ad1ba1c060 192 SUPERFAMILY SSF52172 20 178 2.85E-33 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS00285 9301f016d67d59cbef0771ad1ba1c060 192 SMART SM00448 21 132 1.2E-25 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS00285 9301f016d67d59cbef0771ad1ba1c060 192 Gene3D G3DSA:3.40.50.2300 22 140 4.8E-30 T 14-09-2016 AMK01_RS00285 9301f016d67d59cbef0771ad1ba1c060 192 Gene3D G3DSA:1.10.10.60 141 190 1.0E-29 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS00285 9301f016d67d59cbef0771ad1ba1c060 192 Pfam PF02954 Bacterial regulatory protein, Fis family 156 184 1.7E-4 T 14-09-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMK01_RS00285 9301f016d67d59cbef0771ad1ba1c060 192 Pfam PF00072 Response regulator receiver domain 24 132 2.2E-22 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS01240 429511bafe440450df5c10c1c66223fd 286 SUPERFAMILY SSF161098 77 265 3.27E-24 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01240 429511bafe440450df5c10c1c66223fd 286 Gene3D G3DSA:1.10.3720.10 74 282 5.8E-25 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01240 429511bafe440450df5c10c1c66223fd 286 PANTHER PTHR30465:SF10 1 285 3.0E-82 T 14-09-2016 AMK01_RS01240 429511bafe440450df5c10c1c66223fd 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 282 8.4E-25 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01240 429511bafe440450df5c10c1c66223fd 286 PANTHER PTHR30465 1 285 3.0E-82 T 14-09-2016 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 PANTHER PTHR11019:SF75 12 271 1.1E-54 T 14-09-2016 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 1.2E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 1.2E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 Gene3D G3DSA:1.10.10.60 227 272 2.4E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 Pfam PF02311 AraC-like ligand binding domain 19 146 2.0E-25 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 SUPERFAMILY SSF46689 174 223 1.37E-10 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 Gene3D G3DSA:1.10.10.60 171 226 1.3E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 SUPERFAMILY SSF51215 29 139 3.01E-20 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 SUPERFAMILY SSF46689 225 272 2.91E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 Gene3D G3DSA:2.60.120.280 29 139 1.3E-13 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 PANTHER PTHR11019 12 271 1.1E-54 T 14-09-2016 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 SMART SM00342 189 271 2.0E-32 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS07335 e7b4b3834a1508a77c703262725dfaa5 273 Pfam PF12833 Helix-turn-helix domain 195 272 6.9E-24 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS10050 253126e7e17f691b70d9aebbe94c997c 170 PIRSF PIRSF030820 1 166 5.9E-56 T 14-09-2016 IPR008318 Uncharacterised conserved protein UCP030820 AMK01_RS10050 253126e7e17f691b70d9aebbe94c997c 170 Pfam PF06073 Bacterial protein of unknown function (DUF934) 51 155 5.0E-35 T 14-09-2016 IPR008318 Uncharacterised conserved protein UCP030820 AMK01_RS16510 af10ff426567fbbb0f269e11848ea559 358 PANTHER PTHR22916 1 313 1.8E-49 T 14-09-2016 AMK01_RS16510 af10ff426567fbbb0f269e11848ea559 358 Pfam PF00535 Glycosyl transferase family 2 9 142 1.1E-32 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS16510 af10ff426567fbbb0f269e11848ea559 358 SUPERFAMILY SSF53448 6 234 1.88E-54 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16510 af10ff426567fbbb0f269e11848ea559 358 Gene3D G3DSA:3.90.550.10 6 241 4.5E-52 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 SUPERFAMILY SSF50331 236 370 6.8E-25 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 PANTHER PTHR24220:SF446 5 297 5.7E-155 T 14-09-2016 AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 SUPERFAMILY SSF52540 3 243 3.5E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 PANTHER PTHR24220 5 297 5.7E-155 T 14-09-2016 AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 Gene3D G3DSA:2.40.50.100 239 290 4.4E-12 T 14-09-2016 AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 Gene3D G3DSA:2.40.50.100 356 370 4.4E-12 T 14-09-2016 AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 Pfam PF00005 ABC transporter 19 161 3.0E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 Gene3D G3DSA:2.40.50.140 291 354 2.8E-10 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 Gene3D G3DSA:3.40.50.300 3 233 5.7E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 SMART SM00382 28 210 6.6E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19145 37302e1efe2f90ab8bf457a6cafce650 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 Pfam PF00149 Calcineurin-like phosphoesterase 28 248 3.0E-12 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 14-09-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 Gene3D G3DSA:3.90.780.10 336 533 5.6E-64 T 14-09-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 SUPERFAMILY SSF55816 335 533 1.31E-66 T 14-09-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 Gene3D G3DSA:3.60.21.10 24 332 6.1E-99 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 PANTHER PTHR11575 9 530 5.8E-193 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 ProSitePatterns PS00785 5'-nucleotidase signature 1. 28 40 - T 14-09-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 Pfam PF01476 LysM domain 609 655 2.2E-7 T 14-09-2016 IPR018392 LysM domain AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 SMART SM00257 608 655 1.7E-6 T 14-09-2016 IPR018392 LysM domain AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 Pfam PF02872 5'-nucleotidase, C-terminal domain 336 497 2.1E-46 T 14-09-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 SUPERFAMILY SSF56300 26 331 6.65E-90 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 Gene3D G3DSA:3.10.350.10 608 655 1.6E-5 T 14-09-2016 IPR018392 LysM domain AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 PRINTS PR01607 Apyrase family signature 273 293 1.4E-41 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 PRINTS PR01607 Apyrase family signature 470 489 1.4E-41 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 PRINTS PR01607 Apyrase family signature 212 229 1.4E-41 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 PRINTS PR01607 Apyrase family signature 26 44 1.4E-41 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 PRINTS PR01607 Apyrase family signature 231 254 1.4E-41 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS18340 5f5cc111c250eb7b6ee74891f62ffcd8 657 PRINTS PR01607 Apyrase family signature 393 416 1.4E-41 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS19840 35003b86818704bdacdaced276a7c531 159 PIRSF PIRSF000216 8 159 1.2E-46 T 14-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK01_RS19840 35003b86818704bdacdaced276a7c531 159 SUPERFAMILY SSF52833 10 157 1.23E-46 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19840 35003b86818704bdacdaced276a7c531 159 PANTHER PTHR10371 28 159 2.2E-44 T 14-09-2016 AMK01_RS19840 35003b86818704bdacdaced276a7c531 159 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 115 133 - T 14-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK01_RS19840 35003b86818704bdacdaced276a7c531 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 17 156 4.2E-42 T 14-09-2016 AMK01_RS19840 35003b86818704bdacdaced276a7c531 159 Gene3D G3DSA:3.40.30.10 78 156 9.4E-8 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06400 99d480364c8763684f93d93e7235a246 169 PANTHER PTHR11527:SF96 2 167 6.1E-52 T 14-09-2016 AMK01_RS06400 99d480364c8763684f93d93e7235a246 169 Gene3D G3DSA:2.60.40.790 20 167 3.9E-40 T 14-09-2016 IPR008978 HSP20-like chaperone AMK01_RS06400 99d480364c8763684f93d93e7235a246 169 SUPERFAMILY SSF49764 47 167 5.49E-37 T 14-09-2016 IPR008978 HSP20-like chaperone AMK01_RS06400 99d480364c8763684f93d93e7235a246 169 PANTHER PTHR11527 2 167 6.1E-52 T 14-09-2016 IPR031107 Small heat shock protein HSP20 AMK01_RS06400 99d480364c8763684f93d93e7235a246 169 Pfam PF00011 Hsp20/alpha crystallin family 69 167 5.1E-24 T 14-09-2016 IPR002068 Alpha crystallin/Hsp20 domain AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 Gene3D G3DSA:3.50.50.60 140 336 1.2E-52 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PANTHER PTHR22912:SF151 2 461 5.1E-246 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PANTHER PTHR22912 2 461 5.1E-246 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 6.3E-39 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.3E-39 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 6.3E-39 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.3E-39 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 6.3E-39 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 14-09-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 SUPERFAMILY SSF55424 345 467 1.03E-44 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 SUPERFAMILY SSF51905 1 368 1.53E-63 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 330 2.5E-68 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 5.4E-42 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 2 468 2.4E-175 T 14-09-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PIRSF PIRSF000350 1 467 2.4E-92 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 1.1E-78 T 14-09-2016 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 Gene3D G3DSA:3.50.50.60 2 139 3.5E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS19960 317ec99f5f0e072ebbb111662b593f6a 468 Gene3D G3DSA:3.30.390.30 337 463 2.9E-52 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS03410 7e25ee2c5043b15d9026f861d1c7f6ee 129 Pfam PF00072 Response regulator receiver domain 9 122 2.7E-26 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03410 7e25ee2c5043b15d9026f861d1c7f6ee 129 Gene3D G3DSA:3.40.50.2300 4 125 5.2E-34 T 14-09-2016 AMK01_RS03410 7e25ee2c5043b15d9026f861d1c7f6ee 129 PANTHER PTHR26402 7 125 3.1E-35 T 14-09-2016 AMK01_RS03410 7e25ee2c5043b15d9026f861d1c7f6ee 129 SMART SM00448 7 121 3.7E-33 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03410 7e25ee2c5043b15d9026f861d1c7f6ee 129 SUPERFAMILY SSF52172 5 126 7.4E-34 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 Gene3D G3DSA:3.30.390.10 1 113 9.4E-48 T 14-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 SUPERFAMILY SSF54826 1 112 6.59E-31 T 14-09-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 PANTHER PTHR13794:SF4 1 382 9.9E-149 T 14-09-2016 AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 PANTHER PTHR13794 1 382 9.9E-149 T 14-09-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 SUPERFAMILY SSF51604 95 357 5.5E-80 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 SMART SM00922 125 230 4.1E-21 T 14-09-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 Pfam PF13378 Enolase C-terminal domain-like 128 355 2.2E-64 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 Gene3D G3DSA:3.20.20.120 114 349 5.0E-89 T 14-09-2016 IPR029065 Enolase C-terminal domain-like AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 14-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 8.1E-27 T 14-09-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AMK01_RS19100 520cf8c15ce37b335c6b2a692c84d078 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 14-09-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 Gene3D G3DSA:3.40.50.2300 64 183 1.1E-33 T 14-09-2016 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 60 1.9E-13 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 SUPERFAMILY SSF53822 74 340 2.75E-69 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 Gene3D G3DSA:1.10.260.40 13 63 1.6E-18 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 Gene3D G3DSA:3.40.50.2300 184 340 6.3E-51 T 14-09-2016 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 SMART SM00354 13 84 5.5E-20 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 Pfam PF13377 Periplasmic binding protein-like domain 179 338 9.4E-34 T 14-09-2016 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 PANTHER PTHR30146 13 340 1.4E-94 T 14-09-2016 AMK01_RS16040 a4410e949fca9353f4eeec25fb23be63 342 SUPERFAMILY SSF47413 13 72 8.44E-14 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS20355 f7676761ca602545c5d48339cbce7c54 265 SUPERFAMILY SSF53850 7 259 5.59E-63 T 14-09-2016 AMK01_RS20355 f7676761ca602545c5d48339cbce7c54 265 SMART SM00062 33 260 2.2E-50 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS20355 f7676761ca602545c5d48339cbce7c54 265 Gene3D G3DSA:3.40.190.10 221 258 1.5E-39 T 14-09-2016 AMK01_RS20355 f7676761ca602545c5d48339cbce7c54 265 Gene3D G3DSA:3.40.190.10 32 110 1.5E-39 T 14-09-2016 AMK01_RS20355 f7676761ca602545c5d48339cbce7c54 265 Gene3D G3DSA:3.40.190.10 111 220 2.3E-16 T 14-09-2016 AMK01_RS20355 f7676761ca602545c5d48339cbce7c54 265 SMART SM00079 33 260 1.7E-5 T 14-09-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMK01_RS20355 f7676761ca602545c5d48339cbce7c54 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 259 3.6E-56 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS20355 f7676761ca602545c5d48339cbce7c54 265 PANTHER PTHR18966 25 258 1.4E-39 T 14-09-2016 AMK01_RS06900 ef5e05f19fb55da48b141144a45b2673 381 Gene3D G3DSA:3.40.50.2000 193 348 2.6E-27 T 14-09-2016 AMK01_RS06900 ef5e05f19fb55da48b141144a45b2673 381 PANTHER PTHR12526 31 374 1.0E-49 T 14-09-2016 AMK01_RS06900 ef5e05f19fb55da48b141144a45b2673 381 Pfam PF13439 Glycosyltransferase Family 4 47 181 4.9E-9 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK01_RS06900 ef5e05f19fb55da48b141144a45b2673 381 Pfam PF00534 Glycosyl transferases group 1 189 348 4.7E-32 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS06900 ef5e05f19fb55da48b141144a45b2673 381 SUPERFAMILY SSF53756 31 370 1.88E-65 T 14-09-2016 AMK01_RS06735 38acd4f2734ad1e598750639455c0e9f 338 PANTHER PTHR10859:SF49 5 338 7.7E-102 T 14-09-2016 AMK01_RS06735 38acd4f2734ad1e598750639455c0e9f 338 PANTHER PTHR10859 5 338 7.7E-102 T 14-09-2016 AMK01_RS06735 38acd4f2734ad1e598750639455c0e9f 338 Gene3D G3DSA:3.90.550.10 20 191 9.9E-25 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS06735 38acd4f2734ad1e598750639455c0e9f 338 SUPERFAMILY SSF53448 19 278 4.18E-42 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS06735 38acd4f2734ad1e598750639455c0e9f 338 Pfam PF00535 Glycosyl transferase family 2 21 185 1.3E-28 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS06415 e153ed7367a1d2f28f8240a0bdad73d4 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 12 135 1.1E-56 T 14-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK01_RS06415 e153ed7367a1d2f28f8240a0bdad73d4 137 Pfam PF01641 SelR domain 16 135 3.4E-54 T 14-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK01_RS06415 e153ed7367a1d2f28f8240a0bdad73d4 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 13 136 38.414 T 14-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK01_RS06415 e153ed7367a1d2f28f8240a0bdad73d4 137 Gene3D G3DSA:2.170.150.20 6 135 1.8E-63 T 14-09-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK01_RS06415 e153ed7367a1d2f28f8240a0bdad73d4 137 SUPERFAMILY SSF51316 11 136 1.62E-60 T 14-09-2016 IPR011057 Mss4-like AMK01_RS06415 e153ed7367a1d2f28f8240a0bdad73d4 137 PANTHER PTHR10173 12 137 7.4E-65 T 14-09-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMK01_RS06415 e153ed7367a1d2f28f8240a0bdad73d4 137 PANTHER PTHR10173:SF18 12 137 7.4E-65 T 14-09-2016 AMK01_RS03395 e3fddd7ad7607decc2c33ba4b87f47fd 155 PANTHER PTHR22617 13 151 1.1E-42 T 14-09-2016 AMK01_RS03395 e3fddd7ad7607decc2c33ba4b87f47fd 155 SMART SM00260 10 147 3.1E-44 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS03395 e3fddd7ad7607decc2c33ba4b87f47fd 155 Pfam PF01584 CheW-like domain 15 150 2.1E-36 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS03395 e3fddd7ad7607decc2c33ba4b87f47fd 155 Gene3D G3DSA:2.30.30.40 89 140 4.7E-8 T 14-09-2016 AMK01_RS03395 e3fddd7ad7607decc2c33ba4b87f47fd 155 Gene3D G3DSA:2.40.50.180 53 88 2.0E-11 T 14-09-2016 AMK01_RS03395 e3fddd7ad7607decc2c33ba4b87f47fd 155 SUPERFAMILY SSF50341 8 150 3.14E-39 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 SUPERFAMILY SSF50952 66 97 1.14E-36 T 14-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 SUPERFAMILY SSF50952 148 446 1.14E-36 T 14-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 PANTHER PTHR19328:SF26 133 437 3.8E-142 T 14-09-2016 AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 PANTHER PTHR19328:SF26 49 100 3.8E-142 T 14-09-2016 AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 PANTHER PTHR19328 133 437 3.8E-142 T 14-09-2016 AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 PANTHER PTHR19328 49 100 3.8E-142 T 14-09-2016 AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 Gene3D G3DSA:2.120.10.30 129 445 7.1E-60 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 Gene3D G3DSA:2.120.10.30 36 97 7.1E-60 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS14045 c733dfbc6e1368b4fccde425232737bd 523 Pfam PF07995 Glucose / Sorbosone dehydrogenase 189 366 9.6E-14 T 14-09-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AMK01_RS09415 406bf2cf8ba9aaa1e88328de1973da73 169 Pfam PF00583 Acetyltransferase (GNAT) family 59 131 5.8E-12 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS09415 406bf2cf8ba9aaa1e88328de1973da73 169 PANTHER PTHR23091 2 134 2.9E-12 T 14-09-2016 AMK01_RS09415 406bf2cf8ba9aaa1e88328de1973da73 169 Gene3D G3DSA:3.40.630.30 2 152 3.8E-20 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09415 406bf2cf8ba9aaa1e88328de1973da73 169 SUPERFAMILY SSF55729 2 131 1.28E-19 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09415 406bf2cf8ba9aaa1e88328de1973da73 169 PANTHER PTHR23091:SF225 2 134 2.9E-12 T 14-09-2016 AMK01_RS01330 e15e88e9e23b9871a3017bf152f5073d 212 Pfam PF13302 Acetyltransferase (GNAT) domain 33 168 2.1E-6 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS01330 e15e88e9e23b9871a3017bf152f5073d 212 Gene3D G3DSA:3.40.630.30 33 168 3.6E-11 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS01330 e15e88e9e23b9871a3017bf152f5073d 212 SUPERFAMILY SSF55729 32 170 9.17E-12 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11550 983c546d3146dec131a14e45a4944f6a 225 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 134 2.1E-8 T 14-09-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AMK01_RS11550 983c546d3146dec131a14e45a4944f6a 225 PANTHER PTHR12277 27 210 2.3E-48 T 14-09-2016 AMK01_RS11550 983c546d3146dec131a14e45a4944f6a 225 SUPERFAMILY SSF53474 4 213 5.54E-51 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS11550 983c546d3146dec131a14e45a4944f6a 225 Gene3D G3DSA:3.40.50.1820 3 215 1.8E-64 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS11550 983c546d3146dec131a14e45a4944f6a 225 PANTHER PTHR12277:SF79 27 210 2.3E-48 T 14-09-2016 AMK01_RS09810 e7b40213f9cbb530b56c6439e16423b6 213 SUPERFAMILY SSF52266 3 206 8.55E-26 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS09810 e7b40213f9cbb530b56c6439e16423b6 213 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 192 4.2E-18 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS09810 e7b40213f9cbb530b56c6439e16423b6 213 Gene3D G3DSA:3.40.50.1110 2 209 2.6E-53 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS09590 22efb3bd2d0658322d4c003a41e1d81a 381 PANTHER PTHR30085 79 381 5.2E-140 T 14-09-2016 AMK01_RS09590 22efb3bd2d0658322d4c003a41e1d81a 381 PANTHER PTHR30085:SF3 79 381 5.2E-140 T 14-09-2016 AMK01_RS09590 22efb3bd2d0658322d4c003a41e1d81a 381 SUPERFAMILY SSF161098 168 356 3.01E-39 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09590 22efb3bd2d0658322d4c003a41e1d81a 381 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 167 265 3.5E-22 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS09590 22efb3bd2d0658322d4c003a41e1d81a 381 Gene3D G3DSA:1.10.3720.10 165 375 2.1E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09590 22efb3bd2d0658322d4c003a41e1d81a 381 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 187 375 4.9E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 Gene3D G3DSA:1.10.10.10 149 249 1.1E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 PANTHER PTHR26402:SF476 8 129 8.3E-110 T 14-09-2016 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 PANTHER PTHR26402:SF476 149 249 8.3E-110 T 14-09-2016 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 SUPERFAMILY SSF46894 153 248 9.64E-27 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 SMART SM00448 8 118 2.8E-37 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 SMART SM00862 171 247 4.6E-20 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 Pfam PF00072 Response regulator receiver domain 10 119 9.0E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 Pfam PF00486 Transcriptional regulatory protein, C terminal 171 247 8.2E-22 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 Gene3D G3DSA:3.40.50.2300 7 129 7.8E-42 T 14-09-2016 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 SUPERFAMILY SSF52172 5 129 5.55E-39 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 PANTHER PTHR26402 8 129 8.3E-110 T 14-09-2016 AMK01_RS00185 89cc9f701d227449df161f03ebb73355 251 PANTHER PTHR26402 149 249 8.3E-110 T 14-09-2016 AMK01_RS15770 37b559f2157e03f1a154789aa3c0922b 307 SUPERFAMILY SSF161098 89 292 7.85E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15770 37b559f2157e03f1a154789aa3c0922b 307 PANTHER PTHR30465 1 306 3.5E-124 T 14-09-2016 AMK01_RS15770 37b559f2157e03f1a154789aa3c0922b 307 Gene3D G3DSA:1.10.3720.10 87 302 3.4E-16 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15770 37b559f2157e03f1a154789aa3c0922b 307 PANTHER PTHR30465:SF74 1 306 3.5E-124 T 14-09-2016 AMK01_RS15770 37b559f2157e03f1a154789aa3c0922b 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 8.2E-36 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 SUPERFAMILY SSF51735 10 258 8.48E-67 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PANTHER PTHR24322:SF317 162 194 9.6E-58 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PANTHER PTHR24322 15 146 9.6E-58 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PANTHER PTHR24322:SF317 15 146 9.6E-58 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PANTHER PTHR24322 162 194 9.6E-58 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PIRSF PIRSF000094 5 263 5.0E-113 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.9E-89 T 14-09-2016 AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 Gene3D G3DSA:3.40.50.720 10 204 3.6E-68 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.9E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.9E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.9E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04775 f350c0e45859e2727bd0f0fe7a3f5adf 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.9E-11 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10865 142851f1369b6df1c5160902daa0858a 376 Gene3D G3DSA:3.20.20.105 2 368 3.9E-156 T 14-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS10865 142851f1369b6df1c5160902daa0858a 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 367 3.0E-139 T 14-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS10865 142851f1369b6df1c5160902daa0858a 376 PANTHER PTHR21148 1 368 8.3E-160 T 14-09-2016 AMK01_RS10865 142851f1369b6df1c5160902daa0858a 376 SUPERFAMILY SSF51713 5 366 6.8E-151 T 14-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS10865 142851f1369b6df1c5160902daa0858a 376 PANTHER PTHR21148:SF26 1 368 8.3E-160 T 14-09-2016 AMK01_RS10865 142851f1369b6df1c5160902daa0858a 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 362 55.049 T 14-09-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS10865 142851f1369b6df1c5160902daa0858a 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 367 4.4E-143 T 14-09-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS10865 142851f1369b6df1c5160902daa0858a 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 363 1.3E-85 T 14-09-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 14-09-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-09-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 SUPERFAMILY SSF54534 81 155 7.85E-24 T 14-09-2016 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 PANTHER PTHR30437 1 157 8.0E-67 T 14-09-2016 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 33.591 T 14-09-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.7E-29 T 14-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 Gene3D G3DSA:1.10.287.180 3 76 2.6E-32 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 6.5E-30 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 PIRSF PIRSF006092 1 157 6.6E-55 T 14-09-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 Gene3D G3DSA:3.10.50.30 77 156 1.6E-32 T 14-09-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 155 1.6E-62 T 14-09-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AMK01_RS15185 7c52df7ebd451c7c7923b79eac42fbe3 158 SUPERFAMILY SSF46557 4 77 2.22E-26 T 14-09-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 Gene3D G3DSA:2.40.50.140 285 344 2.8E-15 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 SUPERFAMILY SSF52540 4 243 4.79E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 Pfam PF08402 TOBE domain 280 351 2.5E-10 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 SMART SM00382 28 219 4.8E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 Gene3D G3DSA:3.40.50.300 4 234 2.6E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 PANTHER PTHR24220:SF151 5 291 3.9E-150 T 14-09-2016 AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 SUPERFAMILY SSF50331 237 358 6.56E-26 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 PANTHER PTHR24220 5 291 3.9E-150 T 14-09-2016 AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 Pfam PF00005 ABC transporter 20 161 2.6E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 Gene3D G3DSA:2.40.50.100 345 358 8.7E-11 T 14-09-2016 AMK01_RS10620 f8d58ab6882c4dde16962f11929fb386 359 Gene3D G3DSA:2.40.50.100 239 284 8.7E-11 T 14-09-2016 AMK01_RS17350 6e0bd7338f47b514c80c3c85d0b41705 294 PANTHER PTHR30406:SF2 11 288 1.8E-82 T 14-09-2016 AMK01_RS17350 6e0bd7338f47b514c80c3c85d0b41705 294 SUPERFAMILY SSF161098 52 278 3.4E-57 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17350 6e0bd7338f47b514c80c3c85d0b41705 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 289 1.9E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17350 6e0bd7338f47b514c80c3c85d0b41705 294 Gene3D G3DSA:1.10.3720.10 58 288 1.1E-59 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17350 6e0bd7338f47b514c80c3c85d0b41705 294 PANTHER PTHR30406 11 288 1.8E-82 T 14-09-2016 AMK01_RS15310 a28e384f94bc86e6a3f582f4ad6ee5f6 380 SUPERFAMILY SSF50952 28 375 6.93E-50 T 14-09-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMK01_RS15310 a28e384f94bc86e6a3f582f4ad6ee5f6 380 PANTHER PTHR19328 36 373 5.1E-68 T 14-09-2016 AMK01_RS15310 a28e384f94bc86e6a3f582f4ad6ee5f6 380 Pfam PF07995 Glucose / Sorbosone dehydrogenase 43 371 3.4E-125 T 14-09-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AMK01_RS15310 a28e384f94bc86e6a3f582f4ad6ee5f6 380 Gene3D G3DSA:2.120.10.30 29 378 9.7E-102 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 Pfam PF03734 L,D-transpeptidase catalytic domain 197 363 9.2E-24 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 PANTHER PTHR41533:SF1 8 429 3.4E-89 T 14-09-2016 AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 Pfam PF01471 Putative peptidoglycan binding domain 112 169 8.0E-10 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 Gene3D G3DSA:2.40.440.10 303 350 1.2E-9 T 14-09-2016 AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 Gene3D G3DSA:2.40.440.10 192 241 1.2E-9 T 14-09-2016 AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 SUPERFAMILY SSF141523 301 350 1.44E-14 T 14-09-2016 AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 SUPERFAMILY SSF141523 194 250 1.44E-14 T 14-09-2016 AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 PANTHER PTHR41533 8 429 3.4E-89 T 14-09-2016 AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 SUPERFAMILY SSF47090 101 177 6.67E-16 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS07680 a45618568cb2c39e3043360b35730a86 433 Gene3D G3DSA:1.10.101.10 102 172 8.8E-17 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS10965 3e4a9194fd0bb0aa410babc4ffcb1487 267 Gene3D G3DSA:3.40.50.300 18 263 2.9E-77 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10965 3e4a9194fd0bb0aa410babc4ffcb1487 267 SUPERFAMILY SSF52540 19 262 3.96E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10965 3e4a9194fd0bb0aa410babc4ffcb1487 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10965 3e4a9194fd0bb0aa410babc4ffcb1487 267 Pfam PF00005 ABC transporter 34 192 1.3E-32 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10965 3e4a9194fd0bb0aa410babc4ffcb1487 267 PANTHER PTHR24220:SF472 20 264 7.7E-137 T 14-09-2016 AMK01_RS10965 3e4a9194fd0bb0aa410babc4ffcb1487 267 PANTHER PTHR24220 20 264 7.7E-137 T 14-09-2016 AMK01_RS10965 3e4a9194fd0bb0aa410babc4ffcb1487 267 SMART SM00382 43 240 4.1E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10965 3e4a9194fd0bb0aa410babc4ffcb1487 267 PIRSF PIRSF039085 15 267 3.6E-114 T 14-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK01_RS11590 8080c275b202ef3c6c2e71086189afc2 275 PANTHER PTHR21496:SF6 14 271 2.8E-98 T 14-09-2016 AMK01_RS11590 8080c275b202ef3c6c2e71086189afc2 275 PANTHER PTHR21496 14 271 2.8E-98 T 14-09-2016 AMK01_RS11590 8080c275b202ef3c6c2e71086189afc2 275 Pfam PF04305 Protein of unknown function (DUF455) 20 266 9.6E-96 T 14-09-2016 IPR007402 Protein of unknown function DUF455 AMK01_RS11590 8080c275b202ef3c6c2e71086189afc2 275 SUPERFAMILY SSF47240 81 241 1.79E-16 T 14-09-2016 IPR009078 Ferritin-like superfamily AMK01_RS11590 8080c275b202ef3c6c2e71086189afc2 275 Gene3D G3DSA:1.20.1260.10 83 183 0.001 T 14-09-2016 IPR012347 Ferritin-related AMK01_RS11590 8080c275b202ef3c6c2e71086189afc2 275 PIRSF PIRSF012318 4 275 7.3E-112 T 14-09-2016 IPR011197 Uncharacterised conserved protein UCP012318 AMK01_RS17385 f60d477691c53a9a46ea3aa292a88cb9 414 Pfam PF00534 Glycosyl transferases group 1 227 366 5.1E-20 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS17385 f60d477691c53a9a46ea3aa292a88cb9 414 SUPERFAMILY SSF53756 40 396 2.34E-53 T 14-09-2016 AMK01_RS17385 f60d477691c53a9a46ea3aa292a88cb9 414 Gene3D G3DSA:3.40.50.2000 236 361 7.6E-13 T 14-09-2016 AMK01_RS17385 f60d477691c53a9a46ea3aa292a88cb9 414 PANTHER PTHR12526:SF380 37 364 2.4E-39 T 14-09-2016 AMK01_RS17385 f60d477691c53a9a46ea3aa292a88cb9 414 PANTHER PTHR12526 37 364 2.4E-39 T 14-09-2016 AMK01_RS17385 f60d477691c53a9a46ea3aa292a88cb9 414 Pfam PF13439 Glycosyltransferase Family 4 52 225 1.6E-10 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK01_RS03550 5de801fc035bbc272e89a65e8ea628ef 301 SUPERFAMILY SSF64518 1 301 1.83E-64 T 14-09-2016 AMK01_RS03550 5de801fc035bbc272e89a65e8ea628ef 301 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 137 9.6E-31 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03550 5de801fc035bbc272e89a65e8ea628ef 301 Gene3D G3DSA:1.20.1330.10 203 252 7.4E-16 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03550 5de801fc035bbc272e89a65e8ea628ef 301 Gene3D G3DSA:1.20.1330.10 53 169 7.4E-16 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03550 5de801fc035bbc272e89a65e8ea628ef 301 PRINTS PR00207 Flagellin signature 107 130 7.1E-6 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03550 5de801fc035bbc272e89a65e8ea628ef 301 PRINTS PR00207 Flagellin signature 36 53 7.1E-6 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03550 5de801fc035bbc272e89a65e8ea628ef 301 Pfam PF00700 Bacterial flagellin C-terminal helical region 216 300 1.1E-17 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03550 5de801fc035bbc272e89a65e8ea628ef 301 PANTHER PTHR30244 2 301 1.6E-13 T 14-09-2016 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 SMART SM00304 529 581 4.4 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 SMART SM00304 448 501 3.2E-8 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 Pfam PF00672 HAMP domain 430 494 4.7E-11 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 Gene3D G3DSA:1.10.287.950 596 801 8.9E-55 T 14-09-2016 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 643 828 6.7E-56 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 PANTHER PTHR32089 392 483 4.2E-110 T 14-09-2016 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 PANTHER PTHR32089 564 832 4.2E-110 T 14-09-2016 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 SUPERFAMILY SSF158472 450 497 1.57E-9 T 14-09-2016 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 SUPERFAMILY SSF58104 549 832 3.79E-63 T 14-09-2016 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 SMART SM00283 582 829 4.5E-102 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 PANTHER PTHR32089:SF63 392 483 4.2E-110 T 14-09-2016 AMK01_RS03745 67eeda5bb069b326fd743aa34db62367 843 PANTHER PTHR32089:SF63 564 832 4.2E-110 T 14-09-2016 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 Gene3D G3DSA:2.40.50.140 408 538 5.3E-35 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 SUPERFAMILY SSF56091 203 403 7.19E-47 T 14-09-2016 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 PANTHER PTHR10459:SF10 82 535 2.1E-57 T 14-09-2016 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 Gene3D G3DSA:3.30.1490.70 201 232 5.6E-17 T 14-09-2016 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 Gene3D G3DSA:3.30.1490.70 360 404 5.6E-17 T 14-09-2016 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 Pfam PF04675 DNA ligase N terminus 3 160 1.8E-9 T 14-09-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 536 6.4E-249 T 14-09-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 SUPERFAMILY SSF50249 408 537 1.22E-29 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 Gene3D G3DSA:3.30.470.30 233 348 6.9E-21 T 14-09-2016 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 Pfam PF01068 ATP dependent DNA ligase domain 207 403 3.2E-27 T 14-09-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 228 236 - T 14-09-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 Pfam PF04679 ATP dependent DNA ligase C terminal region 424 521 1.1E-11 T 14-09-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 AMK01_RS06000 52ab10055ce3afd4bc157bf9161073e3 541 PANTHER PTHR10459 82 535 2.1E-57 T 14-09-2016 AMK01_RS15810 0bf9f836c6de45572260224d969e5e3d 393 Pfam PF13692 Glycosyl transferases group 1 206 318 7.8E-19 T 14-09-2016 AMK01_RS15810 0bf9f836c6de45572260224d969e5e3d 393 Pfam PF13439 Glycosyltransferase Family 4 38 188 1.3E-17 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK01_RS15810 0bf9f836c6de45572260224d969e5e3d 393 SUPERFAMILY SSF53756 26 356 8.72E-62 T 14-09-2016 AMK01_RS15810 0bf9f836c6de45572260224d969e5e3d 393 PANTHER PTHR12526 24 358 3.5E-79 T 14-09-2016 AMK01_RS15810 0bf9f836c6de45572260224d969e5e3d 393 PANTHER PTHR12526:SF363 24 358 3.5E-79 T 14-09-2016 AMK01_RS15810 0bf9f836c6de45572260224d969e5e3d 393 Gene3D G3DSA:3.40.50.2000 185 318 1.6E-15 T 14-09-2016 AMK01_RS04955 5cf86f56b8162c9a940e790b49cb679f 102 SUPERFAMILY SSF54909 2 91 2.86E-23 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS04955 5cf86f56b8162c9a940e790b49cb679f 102 SMART SM00886 2 102 3.2E-30 T 14-09-2016 IPR013097 Stress responsive alpha-beta barrel AMK01_RS04955 5cf86f56b8162c9a940e790b49cb679f 102 Gene3D G3DSA:3.30.70.900 1 101 2.4E-31 T 14-09-2016 AMK01_RS04955 5cf86f56b8162c9a940e790b49cb679f 102 PANTHER PTHR33178 4 99 1.1E-19 T 14-09-2016 AMK01_RS04955 5cf86f56b8162c9a940e790b49cb679f 102 Pfam PF07876 Stress responsive A/B Barrel Domain 2 101 5.4E-23 T 14-09-2016 IPR013097 Stress responsive alpha-beta barrel AMK01_RS08670 adc2d2eb56b2ddee75aeba073fb20396 259 PANTHER PTHR11941 6 255 4.3E-81 T 14-09-2016 AMK01_RS08670 adc2d2eb56b2ddee75aeba073fb20396 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 6.2E-53 T 14-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK01_RS08670 adc2d2eb56b2ddee75aeba073fb20396 259 SUPERFAMILY SSF52096 3 258 3.7E-78 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS08670 adc2d2eb56b2ddee75aeba073fb20396 259 Gene3D G3DSA:3.90.226.10 3 252 1.5E-77 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 PANTHER PTHR13734:SF45 157 684 1.7E-99 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 SUPERFAMILY SSF81301 56 220 3.27E-27 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 PIRSF PIRSF006288 48 940 0.0 T 14-09-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 58 944 301.957 T 14-09-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Pfam PF08335 GlnD PII-uridylyltransferase 227 365 6.0E-36 T 14-09-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 SUPERFAMILY SSF81593 239 352 1.73E-9 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Pfam PF01909 Nucleotidyltransferase domain 119 181 1.3E-5 T 14-09-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Gene3D G3DSA:3.30.460.10 116 203 2.1E-8 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 73 932 0.0 T 14-09-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Pfam PF01966 HD domain 512 626 1.3E-16 T 14-09-2016 IPR006674 HD domain AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 SUPERFAMILY SSF55021 749 810 5.83E-11 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Gene3D G3DSA:3.30.70.260 751 810 2.8E-8 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Gene3D G3DSA:3.30.70.260 859 912 1.4E-14 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 SUPERFAMILY SSF55021 859 938 2.04E-14 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 SMART SM00471 508 655 3.7E-8 T 14-09-2016 IPR003607 HD/PDEase domain AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Gene3D G3DSA:1.10.3210.10 482 676 5.8E-32 T 14-09-2016 IPR006674 HD domain AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 SUPERFAMILY SSF81891 411 655 2.51E-22 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 PANTHER PTHR13734 157 684 1.7E-99 T 14-09-2016 AMK01_RS02130 417c1c7bcf7651cea6aecb12ab815b71 967 Pfam PF01842 ACT domain 862 913 8.4E-9 T 14-09-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK01_RS14070 8e5397eeddfdfd61fd905cceb2cc2c7f 199 SUPERFAMILY SSF53254 1 188 2.36E-42 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS14070 8e5397eeddfdfd61fd905cceb2cc2c7f 199 PANTHER PTHR23029 1 188 6.3E-37 T 14-09-2016 AMK01_RS14070 8e5397eeddfdfd61fd905cceb2cc2c7f 199 Gene3D G3DSA:3.40.50.1240 4 196 1.1E-41 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS14070 8e5397eeddfdfd61fd905cceb2cc2c7f 199 SMART SM00855 4 157 3.3E-15 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS14070 8e5397eeddfdfd61fd905cceb2cc2c7f 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 196 8.0E-46 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS04295 176e4db053114c9c3463e090059aabe4 448 PANTHER PTHR30624:SF1 2 448 1.5E-124 T 14-09-2016 AMK01_RS04295 176e4db053114c9c3463e090059aabe4 448 SUPERFAMILY SSF111283 10 447 9.55E-120 T 14-09-2016 AMK01_RS04295 176e4db053114c9c3463e090059aabe4 448 PANTHER PTHR30624 2 448 1.5E-124 T 14-09-2016 AMK01_RS04295 176e4db053114c9c3463e090059aabe4 448 Pfam PF01523 Putative modulator of DNA gyrase 29 317 1.2E-51 T 14-09-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS06965 893e577b7cd9990381bf9a3da33dac60 168 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 24 56 1.6E-8 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS06965 893e577b7cd9990381bf9a3da33dac60 168 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 135 1.8E-6 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS06965 893e577b7cd9990381bf9a3da33dac60 168 Gene3D G3DSA:2.160.10.10 2 155 4.3E-39 T 14-09-2016 AMK01_RS06965 893e577b7cd9990381bf9a3da33dac60 168 PANTHER PTHR23416 1 156 1.5E-37 T 14-09-2016 AMK01_RS06965 893e577b7cd9990381bf9a3da33dac60 168 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 109 137 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS06965 893e577b7cd9990381bf9a3da33dac60 168 PANTHER PTHR23416:SF53 1 156 1.5E-37 T 14-09-2016 AMK01_RS06965 893e577b7cd9990381bf9a3da33dac60 168 SUPERFAMILY SSF51161 2 161 4.04E-39 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 SUPERFAMILY SSF46689 2 73 5.13E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 PANTHER PTHR30328 7 184 1.3E-33 T 14-09-2016 AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.9E-5 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.9E-5 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 SUPERFAMILY SSF48498 86 185 4.28E-21 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 PANTHER PTHR30328:SF18 7 184 1.3E-33 T 14-09-2016 AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 5.7E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 Gene3D G3DSA:1.10.357.10 61 186 6.0E-33 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS08910 90b9cc0b2cfcb6c4f2b430823762bc65 191 Gene3D G3DSA:1.10.10.60 3 60 2.6E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14905 7b6129baa90310057609ee71ede8240d 419 PANTHER PTHR15108 9 415 7.7E-50 T 14-09-2016 AMK01_RS14905 7b6129baa90310057609ee71ede8240d 419 Gene3D G3DSA:1.50.10.10 13 401 3.1E-103 T 14-09-2016 IPR012341 Six-hairpin glycosidase GO:0003824 AMK01_RS14905 7b6129baa90310057609ee71ede8240d 419 SUPERFAMILY SSF48208 12 404 2.69E-105 T 14-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK01_RS14905 7b6129baa90310057609ee71ede8240d 419 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 43 396 1.2E-114 T 14-09-2016 AMK01_RS11525 86a8b3662597b1fea869c6579423b17a 424 SUPERFAMILY SSF101960 22 422 1.11E-94 T 14-09-2016 AMK01_RS11525 86a8b3662597b1fea869c6579423b17a 424 Pfam PF01458 Uncharacterized protein family (UPF0051) 173 395 8.9E-64 T 14-09-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMK01_RS11525 86a8b3662597b1fea869c6579423b17a 424 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 141 412 1.6E-84 T 14-09-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AMK01_RS11525 86a8b3662597b1fea869c6579423b17a 424 PANTHER PTHR30508:SF0 1 421 4.4E-89 T 14-09-2016 AMK01_RS11525 86a8b3662597b1fea869c6579423b17a 424 PANTHER PTHR30508 1 421 4.4E-89 T 14-09-2016 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 Gene3D G3DSA:3.40.50.980 77 266 4.1E-43 T 14-09-2016 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-09-2016 IPR020845 AMP-binding, conserved site AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 Gene3D G3DSA:3.40.50.980 267 426 1.1E-26 T 14-09-2016 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 PANTHER PTHR24095:SF178 19 647 0.0 T 14-09-2016 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 Gene3D G3DSA:2.30.38.10 440 515 1.1E-7 T 14-09-2016 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 Gene3D G3DSA:3.30.300.30 518 622 6.8E-24 T 14-09-2016 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 79 2.2E-21 T 14-09-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 SUPERFAMILY SSF56801 8 644 7.33E-178 T 14-09-2016 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.0E-24 T 14-09-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 645 53.457 T 14-09-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 PANTHER PTHR24095 19 647 0.0 T 14-09-2016 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 Pfam PF00501 AMP-binding enzyme 82 522 1.8E-90 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS21130 251cab19011c9e91f8e9e62f44eae96a 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 643 0.0 T 14-09-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 AMK01_RS12915 a4ceae367da25667c8f955bc31f31548 140 SUPERFAMILY SSF52833 2 137 1.89E-38 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS12915 a4ceae367da25667c8f955bc31f31548 140 Pfam PF03960 ArsC family 6 113 8.2E-15 T 14-09-2016 IPR006660 Arsenate reductase-like AMK01_RS12915 a4ceae367da25667c8f955bc31f31548 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 9.1E-45 T 14-09-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AMK01_RS12915 a4ceae367da25667c8f955bc31f31548 140 PANTHER PTHR30041 1 135 1.9E-48 T 14-09-2016 AMK01_RS12915 a4ceae367da25667c8f955bc31f31548 140 PANTHER PTHR30041:SF0 1 135 1.9E-48 T 14-09-2016 AMK01_RS12915 a4ceae367da25667c8f955bc31f31548 140 Gene3D G3DSA:3.40.30.10 1 139 8.6E-59 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20415 e11efb53f46853f84e265a8c18c15d60 294 SUPERFAMILY SSF54637 122 290 8.82E-59 T 14-09-2016 IPR029069 HotDog domain AMK01_RS20415 e11efb53f46853f84e265a8c18c15d60 294 Gene3D G3DSA:3.10.129.10 132 291 1.7E-58 T 14-09-2016 IPR029069 HotDog domain AMK01_RS20415 e11efb53f46853f84e265a8c18c15d60 294 PANTHER PTHR11066:SF34 3 294 3.2E-116 T 14-09-2016 AMK01_RS20415 e11efb53f46853f84e265a8c18c15d60 294 Gene3D G3DSA:3.10.129.10 11 121 3.2E-49 T 14-09-2016 IPR029069 HotDog domain AMK01_RS20415 e11efb53f46853f84e265a8c18c15d60 294 Pfam PF13622 Thioesterase-like superfamily 37 288 1.2E-57 T 14-09-2016 AMK01_RS20415 e11efb53f46853f84e265a8c18c15d60 294 SUPERFAMILY SSF54637 11 120 1.94E-40 T 14-09-2016 IPR029069 HotDog domain AMK01_RS20415 e11efb53f46853f84e265a8c18c15d60 294 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 18 289 2.4E-97 T 14-09-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 AMK01_RS20415 e11efb53f46853f84e265a8c18c15d60 294 PANTHER PTHR11066 3 294 3.2E-116 T 14-09-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 Pfam PF05227 CHASE3 domain 42 176 3.9E-15 T 14-09-2016 IPR007891 CHASE3 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 PANTHER PTHR32089:SF63 109 246 5.5E-106 T 14-09-2016 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 PANTHER PTHR32089:SF63 327 595 5.5E-106 T 14-09-2016 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 Gene3D G3DSA:1.10.287.950 360 564 1.3E-56 T 14-09-2016 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 Pfam PF00672 HAMP domain 191 254 1.5E-12 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 549 7.0E-42 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 470 7.0E-42 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 7.0E-42 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 395 7.0E-42 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 SMART SM00304 292 344 25.0 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 SMART SM00304 211 264 3.7E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 PANTHER PTHR32089 109 246 5.5E-106 T 14-09-2016 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 PANTHER PTHR32089 327 595 5.5E-106 T 14-09-2016 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 SMART SM00283 345 592 1.4E-101 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 SUPERFAMILY SSF158472 211 258 3.92E-9 T 14-09-2016 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 414 591 3.0E-57 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS04645 64028fb2647ac2bc21e5397ca6b4550b 647 SUPERFAMILY SSF58104 312 593 1.26E-67 T 14-09-2016 AMK01_RS03330 bdbe7385aa665572822a357ff3395fe1 125 SUPERFAMILY SSF52172 1 121 5.55E-19 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS03330 bdbe7385aa665572822a357ff3395fe1 125 Pfam PF00072 Response regulator receiver domain 4 120 1.7E-12 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03330 bdbe7385aa665572822a357ff3395fe1 125 PANTHER PTHR26402:SF603 2 124 1.8E-13 T 14-09-2016 AMK01_RS03330 bdbe7385aa665572822a357ff3395fe1 125 SMART SM00448 2 123 3.5E-11 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03330 bdbe7385aa665572822a357ff3395fe1 125 PANTHER PTHR26402 2 124 1.8E-13 T 14-09-2016 AMK01_RS03330 bdbe7385aa665572822a357ff3395fe1 125 Gene3D G3DSA:3.40.50.2300 2 118 1.4E-19 T 14-09-2016 AMK01_RS19660 130551abff2c954ca205402bf246f716 437 SMART SM00116 289 337 0.061 T 14-09-2016 IPR000644 CBS domain AMK01_RS19660 130551abff2c954ca205402bf246f716 437 SMART SM00116 223 272 2.8 T 14-09-2016 IPR000644 CBS domain AMK01_RS19660 130551abff2c954ca205402bf246f716 437 Gene3D G3DSA:3.30.465.10 332 428 2.6E-25 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS19660 130551abff2c954ca205402bf246f716 437 Pfam PF01595 Domain of unknown function DUF21 21 195 3.6E-40 T 14-09-2016 IPR002550 Domain of unknown function DUF21 AMK01_RS19660 130551abff2c954ca205402bf246f716 437 Gene3D G3DSA:3.10.580.10 205 331 4.2E-20 T 14-09-2016 AMK01_RS19660 130551abff2c954ca205402bf246f716 437 SUPERFAMILY SSF54631 210 354 4.39E-33 T 14-09-2016 AMK01_RS19660 130551abff2c954ca205402bf246f716 437 Pfam PF00571 CBS domain 222 272 0.0043 T 14-09-2016 IPR000644 CBS domain AMK01_RS19660 130551abff2c954ca205402bf246f716 437 Pfam PF00571 CBS domain 292 337 1.8E-7 T 14-09-2016 IPR000644 CBS domain AMK01_RS19660 130551abff2c954ca205402bf246f716 437 SMART SM01091 352 430 1.9E-24 T 14-09-2016 IPR005170 Transporter-associated domain AMK01_RS19660 130551abff2c954ca205402bf246f716 437 SUPERFAMILY SSF56176 351 432 8.81E-21 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS19660 130551abff2c954ca205402bf246f716 437 Pfam PF03471 Transporter associated domain 353 428 8.2E-18 T 14-09-2016 IPR005170 Transporter-associated domain AMK01_RS19660 130551abff2c954ca205402bf246f716 437 PANTHER PTHR22777 1 432 6.5E-133 T 14-09-2016 AMK01_RS06670 b700ed94eb8d56abfa6898aaaf6f427b 293 Pfam PF01636 Phosphotransferase enzyme family 38 253 3.6E-13 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AMK01_RS06670 b700ed94eb8d56abfa6898aaaf6f427b 293 Gene3D G3DSA:3.90.1200.10 95 260 9.8E-11 T 14-09-2016 AMK01_RS06670 b700ed94eb8d56abfa6898aaaf6f427b 293 SUPERFAMILY SSF56112 26 245 1.88E-14 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS07860 9f69bfb591036be15223a43912f1fe7f 204 Gene3D G3DSA:3.40.630.30 125 189 8.8E-27 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS07860 9f69bfb591036be15223a43912f1fe7f 204 Gene3D G3DSA:3.40.630.30 1 81 8.8E-27 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS07860 9f69bfb591036be15223a43912f1fe7f 204 SUPERFAMILY SSF55729 2 189 6.13E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS07860 9f69bfb591036be15223a43912f1fe7f 204 Pfam PF00583 Acetyltransferase (GNAT) family 131 184 1.3E-8 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS07860 9f69bfb591036be15223a43912f1fe7f 204 PANTHER PTHR13170 6 204 1.2E-37 T 14-09-2016 AMK01_RS25605 3530f231fbb0d62b79fbfe35dbea3d56 271 SMART SM00382 75 261 2.1E-19 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS25605 3530f231fbb0d62b79fbfe35dbea3d56 271 ProSitePatterns PS00211 ABC transporters family signature. 187 201 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS25605 3530f231fbb0d62b79fbfe35dbea3d56 271 Pfam PF00005 ABC transporter 66 215 1.0E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS25605 3530f231fbb0d62b79fbfe35dbea3d56 271 SUPERFAMILY SSF52540 41 271 4.26E-91 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS25605 3530f231fbb0d62b79fbfe35dbea3d56 271 Gene3D G3DSA:3.40.50.300 50 271 2.2E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS25605 3530f231fbb0d62b79fbfe35dbea3d56 271 PANTHER PTHR24221 1 271 3.5E-157 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 14-09-2016 IPR018181 Heat shock protein 70, conserved site AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Gene3D G3DSA:3.30.420.40 119 191 1.5E-66 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Gene3D G3DSA:3.30.420.40 4 52 1.5E-66 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-09-2016 IPR018181 Heat shock protein 70, conserved site AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Gene3D G3DSA:3.30.30.30 53 109 6.2E-29 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 629 37.862 T 14-09-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-09-2016 IPR018181 Heat shock protein 70, conserved site AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 SUPERFAMILY SSF100920 379 535 7.06E-63 T 14-09-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Gene3D G3DSA:3.30.420.40 192 224 5.5E-37 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Gene3D G3DSA:3.30.420.40 314 356 5.5E-37 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 SUPERFAMILY SSF53067 186 377 2.84E-69 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Pfam PF00012 Hsp70 protein 4 601 9.9E-279 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 SUPERFAMILY SSF100934 502 601 8.11E-19 T 14-09-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 329 345 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 383 402 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 464 480 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 197 207 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PRINTS PR00301 70kDa heat shock protein signature 360 380 6.9E-81 T 14-09-2016 IPR013126 Heat shock protein 70 family AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Gene3D G3DSA:1.20.1270.10 528 600 1.5E-29 T 14-09-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 SUPERFAMILY SSF53067 4 184 1.91E-67 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PANTHER PTHR19375 2 636 0.0 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Gene3D G3DSA:3.90.640.10 225 310 5.5E-32 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 PANTHER PTHR19375:SF173 2 636 0.0 T 14-09-2016 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 3.7E-299 T 14-09-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AMK01_RS00880 56899170dadb963b14db0c8b916f3306 638 Gene3D G3DSA:2.60.34.10 385 527 8.8E-74 T 14-09-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AMK01_RS17805 81278fb6939f7654c617ab423a889ef3 275 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 59 110 4.4E-10 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS14075 2865f444a6dba1a80f4910e69a25e894 324 Gene3D G3DSA:3.20.20.80 206 296 4.1E-7 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS14075 2865f444a6dba1a80f4910e69a25e894 324 Gene3D G3DSA:3.20.20.80 6 188 2.2E-27 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS14075 2865f444a6dba1a80f4910e69a25e894 324 SUPERFAMILY SSF51445 175 296 3.79E-11 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS14075 2865f444a6dba1a80f4910e69a25e894 324 SUPERFAMILY SSF51445 6 193 1.43E-24 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS09605 58a55a38747d56d748b5aa80be86bcee 396 Gene3D G3DSA:3.40.640.10 13 257 1.7E-77 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS09605 58a55a38747d56d748b5aa80be86bcee 396 SUPERFAMILY SSF53383 47 391 1.51E-89 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS09605 58a55a38747d56d748b5aa80be86bcee 396 PANTHER PTHR11808 13 395 1.0E-170 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS09605 58a55a38747d56d748b5aa80be86bcee 396 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 15 392 3.2E-179 T 14-09-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 AMK01_RS09605 58a55a38747d56d748b5aa80be86bcee 396 Gene3D G3DSA:3.90.1150.10 260 393 1.1E-32 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS09605 58a55a38747d56d748b5aa80be86bcee 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 390 4.6E-101 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS09605 58a55a38747d56d748b5aa80be86bcee 396 PIRSF PIRSF001434 1 394 5.2E-118 T 14-09-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK01_RS09605 58a55a38747d56d748b5aa80be86bcee 396 PANTHER PTHR11808:SF45 13 395 1.0E-170 T 14-09-2016 AMK01_RS13270 f58bd38a281006e201e9d1a8b88bfeec 216 SUPERFAMILY SSF46689 15 90 4.99E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13270 f58bd38a281006e201e9d1a8b88bfeec 216 PANTHER PTHR30055:SF92 10 208 1.1E-28 T 14-09-2016 AMK01_RS13270 f58bd38a281006e201e9d1a8b88bfeec 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 3.3E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13270 f58bd38a281006e201e9d1a8b88bfeec 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 3.3E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13270 f58bd38a281006e201e9d1a8b88bfeec 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 1.3E-16 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13270 f58bd38a281006e201e9d1a8b88bfeec 216 PANTHER PTHR30055 10 208 1.1E-28 T 14-09-2016 AMK01_RS13270 f58bd38a281006e201e9d1a8b88bfeec 216 Gene3D G3DSA:1.10.357.10 15 205 8.4E-29 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS16560 81abbffb0f6ab306409787b4c40281a3 210 Pfam PF13489 Methyltransferase domain 37 187 4.5E-23 T 14-09-2016 AMK01_RS16560 81abbffb0f6ab306409787b4c40281a3 210 PANTHER PTHR10108 17 198 8.2E-22 T 14-09-2016 AMK01_RS16560 81abbffb0f6ab306409787b4c40281a3 210 Gene3D G3DSA:3.40.50.150 21 209 1.6E-38 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS16560 81abbffb0f6ab306409787b4c40281a3 210 SUPERFAMILY SSF53335 24 198 3.16E-35 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS03925 b7cf1a75a8061032036ab2a23b609176 113 SUPERFAMILY SSF51182 2 108 9.55E-24 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS03925 b7cf1a75a8061032036ab2a23b609176 113 Gene3D G3DSA:2.60.120.10 30 102 5.5E-7 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS03925 b7cf1a75a8061032036ab2a23b609176 113 Pfam PF05523 WxcM-like, C-terminal 2 107 5.4E-29 T 14-09-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 AMK01_RS06095 fd9c629d9a28b223241027bfa1461860 151 Pfam PF00293 NUDIX domain 36 126 6.8E-7 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS06095 fd9c629d9a28b223241027bfa1461860 151 Gene3D G3DSA:3.90.79.10 5 150 3.6E-19 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS06095 fd9c629d9a28b223241027bfa1461860 151 SUPERFAMILY SSF55811 3 131 1.49E-14 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS20430 f5ac52c0f541ca73393c8042845923c0 223 SUPERFAMILY SSF88697 18 206 4.97E-48 T 14-09-2016 IPR015947 PUA-like domain AMK01_RS20430 f5ac52c0f541ca73393c8042845923c0 223 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 206 6.5E-24 T 14-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK01_RS20430 f5ac52c0f541ca73393c8042845923c0 223 PANTHER PTHR10046 8 206 3.5E-32 T 14-09-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AMK01_RS20430 f5ac52c0f541ca73393c8042845923c0 223 SMART SM00464 17 209 2.7E-11 T 14-09-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK01_RS00380 ebf225b14caae487de59d4b3ae827d63 428 PANTHER PTHR30061:SF1 5 427 6.3E-50 T 14-09-2016 AMK01_RS00380 ebf225b14caae487de59d4b3ae827d63 428 PANTHER PTHR30061 5 427 6.3E-50 T 14-09-2016 AMK01_RS00380 ebf225b14caae487de59d4b3ae827d63 428 Gene3D G3DSA:3.40.190.10 158 320 8.4E-16 T 14-09-2016 AMK01_RS00380 ebf225b14caae487de59d4b3ae827d63 428 Pfam PF13416 Bacterial extracellular solute-binding protein 53 333 1.6E-24 T 14-09-2016 AMK01_RS00380 ebf225b14caae487de59d4b3ae827d63 428 Gene3D G3DSA:3.40.190.10 32 147 7.6E-27 T 14-09-2016 AMK01_RS00380 ebf225b14caae487de59d4b3ae827d63 428 Gene3D G3DSA:3.40.190.10 321 361 7.6E-27 T 14-09-2016 AMK01_RS00380 ebf225b14caae487de59d4b3ae827d63 428 SUPERFAMILY SSF53850 32 427 1.32E-50 T 14-09-2016 AMK01_RS01505 057b80fad4741cea90578814b4336426 119 Pfam PF12893 Putative lumazine-binding 2 116 3.7E-37 T 14-09-2016 AMK01_RS01505 057b80fad4741cea90578814b4336426 119 SUPERFAMILY SSF54427 2 118 8.78E-35 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS01505 057b80fad4741cea90578814b4336426 119 Gene3D G3DSA:3.10.450.50 2 118 5.7E-39 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS19335 8ca9279332a92619ca07b1ea90e37817 285 Gene3D G3DSA:3.60.110.10 2 269 7.8E-80 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS19335 8ca9279332a92619ca07b1ea90e37817 285 Pfam PF00795 Carbon-nitrogen hydrolase 4 257 2.9E-51 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS19335 8ca9279332a92619ca07b1ea90e37817 285 PANTHER PTHR23088:SF27 2 276 1.8E-90 T 14-09-2016 AMK01_RS19335 8ca9279332a92619ca07b1ea90e37817 285 PANTHER PTHR23088 2 276 1.8E-90 T 14-09-2016 AMK01_RS19335 8ca9279332a92619ca07b1ea90e37817 285 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 151 171 - T 14-09-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site AMK01_RS19335 8ca9279332a92619ca07b1ea90e37817 285 SUPERFAMILY SSF56317 3 265 1.96E-77 T 14-09-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AMK01_RS11070 5530fae06d29776a8396a4e8a454198f 226 Pfam PF02223 Thymidylate kinase 11 203 7.4E-48 T 14-09-2016 AMK01_RS11070 5530fae06d29776a8396a4e8a454198f 226 PANTHER PTHR10344 2 222 5.0E-62 T 14-09-2016 AMK01_RS11070 5530fae06d29776a8396a4e8a454198f 226 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 14-09-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMK01_RS11070 5530fae06d29776a8396a4e8a454198f 226 Gene3D G3DSA:3.40.50.300 6 211 1.5E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11070 5530fae06d29776a8396a4e8a454198f 226 SUPERFAMILY SSF52540 5 212 8.69E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11070 5530fae06d29776a8396a4e8a454198f 226 Hamap MF_00165 Thymidylate kinase [tmk]. 7 211 29.73 T 14-09-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMK01_RS11070 5530fae06d29776a8396a4e8a454198f 226 PANTHER PTHR10344:SF0 2 222 5.0E-62 T 14-09-2016 AMK01_RS11070 5530fae06d29776a8396a4e8a454198f 226 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 6 203 8.7E-52 T 14-09-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMK01_RS05225 2c7aa6dc941ee40d887b30455a563793 991 SUPERFAMILY SSF53383 339 488 1.1E-9 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS05225 2c7aa6dc941ee40d887b30455a563793 991 SUPERFAMILY SSF53383 84 308 1.1E-9 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS05225 2c7aa6dc941ee40d887b30455a563793 991 PANTHER PTHR10996 646 827 7.1E-31 T 14-09-2016 AMK01_RS05225 2c7aa6dc941ee40d887b30455a563793 991 Gene3D G3DSA:3.40.640.10 81 293 1.6E-4 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS05225 2c7aa6dc941ee40d887b30455a563793 991 Gene3D G3DSA:3.40.50.720 650 827 5.7E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05225 2c7aa6dc941ee40d887b30455a563793 991 SUPERFAMILY SSF51735 655 828 3.11E-28 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05225 2c7aa6dc941ee40d887b30455a563793 991 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 677 827 2.2E-28 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 PANTHER PTHR26402 1 224 6.5E-88 T 14-09-2016 AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 Gene3D G3DSA:3.40.50.2300 1 122 1.7E-32 T 14-09-2016 AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 SUPERFAMILY SSF46894 123 222 3.12E-27 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 SMART SM00448 1 112 4.0E-32 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 Gene3D G3DSA:1.10.10.10 123 224 1.2E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 Pfam PF00072 Response regulator receiver domain 3 113 2.9E-20 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 SUPERFAMILY SSF52172 1 118 1.71E-33 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 SMART SM00862 146 221 2.9E-20 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 PANTHER PTHR26402:SF578 1 224 6.5E-88 T 14-09-2016 AMK01_RS05330 d72b98c8053bebf6ef0c7ee2bc0d49c7 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.4E-23 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS15475 019047c6c4e79465223dd218d14c6a72 180 Pfam PF00156 Phosphoribosyl transferase domain 35 157 4.6E-16 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK01_RS15475 019047c6c4e79465223dd218d14c6a72 180 SUPERFAMILY SSF53271 10 177 4.59E-53 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS15475 019047c6c4e79465223dd218d14c6a72 180 Gene3D G3DSA:3.40.50.2020 5 178 1.8E-69 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS15475 019047c6c4e79465223dd218d14c6a72 180 PANTHER PTHR32315 5 180 2.5E-81 T 14-09-2016 AMK01_RS15475 019047c6c4e79465223dd218d14c6a72 180 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 8 176 6.9E-67 T 14-09-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 AMK01_RS15475 019047c6c4e79465223dd218d14c6a72 180 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 8 177 37.533 T 14-09-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 AMK01_RS08900 533552cbce396e6ffaa2f16b2255eaa1 422 SUPERFAMILY SSF55073 261 413 7.69E-42 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS08900 533552cbce396e6ffaa2f16b2255eaa1 422 Gene3D G3DSA:3.30.70.270 258 413 1.4E-43 T 14-09-2016 AMK01_RS08900 533552cbce396e6ffaa2f16b2255eaa1 422 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 410 1.5E-35 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08900 533552cbce396e6ffaa2f16b2255eaa1 422 SMART SM00267 246 415 8.4E-49 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08900 533552cbce396e6ffaa2f16b2255eaa1 422 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 413 1.3E-42 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS08900 533552cbce396e6ffaa2f16b2255eaa1 422 PANTHER PTHR10799 289 410 6.7E-26 T 14-09-2016 AMK01_RS07215 cfd98cc91fa3633d27d6fedb72acfdc4 116 SUPERFAMILY SSF55961 13 101 4.45E-14 T 14-09-2016 AMK01_RS07215 cfd98cc91fa3633d27d6fedb72acfdc4 116 Gene3D G3DSA:3.30.530.20 4 57 4.8E-8 T 14-09-2016 IPR023393 START-like domain AMK01_RS07215 cfd98cc91fa3633d27d6fedb72acfdc4 116 Gene3D G3DSA:3.30.530.20 58 98 2.5E-4 T 14-09-2016 IPR023393 START-like domain AMK01_RS04165 98ca2f2235e1a4578cbcc1a7142d67f5 209 PANTHER PTHR30037 1 209 1.5E-101 T 14-09-2016 AMK01_RS04165 98ca2f2235e1a4578cbcc1a7142d67f5 209 Gene3D G3DSA:1.10.340.30 15 196 2.6E-76 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS04165 98ca2f2235e1a4578cbcc1a7142d67f5 209 Pfam PF03352 Methyladenine glycosylase 18 195 1.5E-73 T 14-09-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AMK01_RS04165 98ca2f2235e1a4578cbcc1a7142d67f5 209 PANTHER PTHR30037:SF4 1 209 1.5E-101 T 14-09-2016 AMK01_RS04165 98ca2f2235e1a4578cbcc1a7142d67f5 209 SUPERFAMILY SSF48150 15 199 1.26E-74 T 14-09-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK01_RS18550 8f1069ea2617ddd4fbaa01399eb3de53 480 PANTHER PTHR12526 1 476 9.5E-127 T 14-09-2016 AMK01_RS18550 8f1069ea2617ddd4fbaa01399eb3de53 480 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 4.2E-166 T 14-09-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18550 8f1069ea2617ddd4fbaa01399eb3de53 480 SUPERFAMILY SSF53756 1 476 1.53E-117 T 14-09-2016 AMK01_RS18550 8f1069ea2617ddd4fbaa01399eb3de53 480 Gene3D G3DSA:3.40.50.2000 249 456 4.0E-66 T 14-09-2016 AMK01_RS18550 8f1069ea2617ddd4fbaa01399eb3de53 480 Pfam PF00534 Glycosyl transferases group 1 283 439 1.0E-9 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS18550 8f1069ea2617ddd4fbaa01399eb3de53 480 Hamap MF_00484 Glycogen synthase [glgA]. 1 475 46.902 T 14-09-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS18550 8f1069ea2617ddd4fbaa01399eb3de53 480 PANTHER PTHR12526:SF295 1 476 9.5E-127 T 14-09-2016 AMK01_RS18550 8f1069ea2617ddd4fbaa01399eb3de53 480 Pfam PF08323 Starch synthase catalytic domain 2 235 3.0E-70 T 14-09-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK01_RS11810 4ce87661f21c5272c83f26170940f7a4 426 Pfam PF07690 Major Facilitator Superfamily 29 372 2.1E-38 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS11810 4ce87661f21c5272c83f26170940f7a4 426 PANTHER PTHR23502:SF19 24 402 2.4E-96 T 14-09-2016 AMK01_RS11810 4ce87661f21c5272c83f26170940f7a4 426 Gene3D G3DSA:1.20.1250.20 25 208 1.3E-28 T 14-09-2016 AMK01_RS11810 4ce87661f21c5272c83f26170940f7a4 426 PANTHER PTHR23502 24 402 2.4E-96 T 14-09-2016 AMK01_RS11810 4ce87661f21c5272c83f26170940f7a4 426 SUPERFAMILY SSF103473 20 403 6.41E-54 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS17915 1f1e75694e762674f60bb632ba345a6a 274 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 258 3.2E-76 T 14-09-2016 IPR005235 Metallophosphoesterase, YmdB-like AMK01_RS17915 1f1e75694e762674f60bb632ba345a6a 274 Pfam PF13277 YmdB-like protein 4 258 4.0E-98 T 14-09-2016 IPR005235 Metallophosphoesterase, YmdB-like AMK01_RS17915 1f1e75694e762674f60bb632ba345a6a 274 PIRSF PIRSF004789 1 264 1.2E-83 T 14-09-2016 IPR005235 Metallophosphoesterase, YmdB-like AMK01_RS17915 1f1e75694e762674f60bb632ba345a6a 274 Gene3D G3DSA:3.60.21.30 1 273 1.4E-108 T 14-09-2016 AMK01_RS17915 1f1e75694e762674f60bb632ba345a6a 274 PANTHER PTHR36303:SF1 2 270 2.0E-126 T 14-09-2016 AMK01_RS17915 1f1e75694e762674f60bb632ba345a6a 274 PANTHER PTHR36303 2 270 2.0E-126 T 14-09-2016 AMK01_RS17915 1f1e75694e762674f60bb632ba345a6a 274 SUPERFAMILY SSF56300 1 260 6.21E-79 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS06250 3266b7d80d506076f4390392b728af4f 209 SUPERFAMILY SSF47616 75 203 7.1E-26 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS06250 3266b7d80d506076f4390392b728af4f 209 Gene3D G3DSA:3.40.30.10 2 80 1.3E-17 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06250 3266b7d80d506076f4390392b728af4f 209 PANTHER PTHR11260 1 197 1.4E-28 T 14-09-2016 AMK01_RS06250 3266b7d80d506076f4390392b728af4f 209 SUPERFAMILY SSF52833 1 81 1.14E-15 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06250 3266b7d80d506076f4390392b728af4f 209 Gene3D G3DSA:1.20.1050.10 82 200 1.8E-22 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS06250 3266b7d80d506076f4390392b728af4f 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 194 8.8E-10 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AMK01_RS06250 3266b7d80d506076f4390392b728af4f 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 77 9.9E-9 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 14-09-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 PANTHER PTHR11019:SF119 24 270 3.8E-31 T 14-09-2016 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 Pfam PF12833 Helix-turn-helix domain 186 261 1.5E-18 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 SMART SM00342 179 261 1.8E-28 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 1.3E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 1.3E-5 T 14-09-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 Gene3D G3DSA:1.10.10.60 214 262 1.4E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 PANTHER PTHR11019 24 270 3.8E-31 T 14-09-2016 AMK01_RS01640 b1ee3164e9c03fa07181c41150bd784f 283 SUPERFAMILY SSF46689 215 262 1.79E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS00235 a9a3bedb60a77037ca6ed33c93ae8b33 216 PANTHER PTHR21235:SF1 3 214 8.2E-73 T 14-09-2016 AMK01_RS00235 a9a3bedb60a77037ca6ed33c93ae8b33 216 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 214 33.523 T 14-09-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMK01_RS00235 a9a3bedb60a77037ca6ed33c93ae8b33 216 PIRSF PIRSF000495 1 216 1.9E-64 T 14-09-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMK01_RS00235 a9a3bedb60a77037ca6ed33c93ae8b33 216 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 213 9.0E-59 T 14-09-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 AMK01_RS00235 a9a3bedb60a77037ca6ed33c93ae8b33 216 PANTHER PTHR21235 3 214 8.2E-73 T 14-09-2016 AMK01_RS00235 a9a3bedb60a77037ca6ed33c93ae8b33 216 Pfam PF00117 Glutamine amidotransferase class-I 14 211 9.3E-19 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS00235 a9a3bedb60a77037ca6ed33c93ae8b33 216 Gene3D G3DSA:3.40.50.880 1 214 3.8E-65 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS00235 a9a3bedb60a77037ca6ed33c93ae8b33 216 SUPERFAMILY SSF52317 3 205 4.87E-51 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-09-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.3E-19 T 14-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 PANTHER PTHR33343 1 67 2.0E-17 T 14-09-2016 AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.3E-10 T 14-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.3E-10 T 14-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.3E-10 T 14-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 Pfam PF01632 Ribosomal protein L35 2 59 5.4E-19 T 14-09-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.218 T 14-09-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK01_RS01485 3c1b2ed02b6b8814b0407516deb8f1ed 67 SUPERFAMILY SSF143034 2 62 3.01E-19 T 14-09-2016 AMK01_RS09430 d99d77c5b14f6db7d1bbd2bdb00f862d 167 SUPERFAMILY SSF55729 3 164 1.06E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09430 d99d77c5b14f6db7d1bbd2bdb00f862d 167 Gene3D G3DSA:3.40.630.30 3 153 5.6E-27 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09430 d99d77c5b14f6db7d1bbd2bdb00f862d 167 Pfam PF13673 Acetyltransferase (GNAT) domain 41 147 2.3E-14 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS09430 d99d77c5b14f6db7d1bbd2bdb00f862d 167 PANTHER PTHR23091 4 164 4.2E-15 T 14-09-2016 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 PRINTS PR00116 Arginase signature 124 151 2.3E-47 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 PRINTS PR00116 Arginase signature 177 195 2.3E-47 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 PRINTS PR00116 Arginase signature 97 112 2.3E-47 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 PRINTS PR00116 Arginase signature 226 255 2.3E-47 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 PRINTS PR00116 Arginase signature 261 275 2.3E-47 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 PANTHER PTHR11358:SF2 1 309 2.7E-106 T 14-09-2016 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 PIRSF PIRSF036979 1 299 1.0E-33 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 SUPERFAMILY SSF52768 6 308 5.58E-91 T 14-09-2016 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 Pfam PF00491 Arginase family 7 299 1.9E-79 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 14-09-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 Gene3D G3DSA:3.40.800.10 3 303 2.1E-90 T 14-09-2016 IPR023696 Ureohydrolase domain AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 PANTHER PTHR11358 1 309 2.7E-106 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS19800 9b63c5c30a3ce709a345f90fec9c523d 311 TIGRFAM TIGR01229 rocF_arginase: arginase 10 301 1.6E-94 T 14-09-2016 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: REACT_13|UniPathway: UPA00158 AMK01_RS04320 2916a8ce37b0e1323d9ab740d9bea240 347 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 17 301 3.4E-56 T 14-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK01_RS04320 2916a8ce37b0e1323d9ab740d9bea240 347 PANTHER PTHR30160 18 342 4.9E-54 T 14-09-2016 AMK01_RS04320 2916a8ce37b0e1323d9ab740d9bea240 347 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 336 33.383 T 14-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK01_RS04320 2916a8ce37b0e1323d9ab740d9bea240 347 SUPERFAMILY SSF52540 45 148 6.28E-10 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04320 2916a8ce37b0e1323d9ab740d9bea240 347 PANTHER PTHR30160:SF13 18 342 4.9E-54 T 14-09-2016 AMK01_RS04320 2916a8ce37b0e1323d9ab740d9bea240 347 Gene3D G3DSA:3.40.50.300 44 148 6.3E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04320 2916a8ce37b0e1323d9ab740d9bea240 347 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 17 324 7.6E-86 T 14-09-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK01_RS06295 c2cb9e0613cb648eb43305035a59ac5a 485 SUPERFAMILY SSF103473 12 204 5.36E-55 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS06295 c2cb9e0613cb648eb43305035a59ac5a 485 SUPERFAMILY SSF103473 254 463 5.36E-55 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS06295 c2cb9e0613cb648eb43305035a59ac5a 485 Gene3D G3DSA:1.20.1250.20 24 199 4.3E-27 T 14-09-2016 AMK01_RS06295 c2cb9e0613cb648eb43305035a59ac5a 485 Gene3D G3DSA:1.20.1250.20 271 467 5.4E-14 T 14-09-2016 AMK01_RS06295 c2cb9e0613cb648eb43305035a59ac5a 485 Pfam PF07690 Major Facilitator Superfamily 28 415 3.2E-46 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS06295 c2cb9e0613cb648eb43305035a59ac5a 485 PANTHER PTHR23501 12 454 5.4E-164 T 14-09-2016 AMK01_RS06295 c2cb9e0613cb648eb43305035a59ac5a 485 PANTHER PTHR23501:SF66 12 454 5.4E-164 T 14-09-2016 AMK01_RS11060 c1a93845d80fc95b712a8fafa0c820e1 262 PANTHER PTHR30269:SF2 1 260 2.7E-57 T 14-09-2016 AMK01_RS11060 c1a93845d80fc95b712a8fafa0c820e1 262 Pfam PF01925 Sulfite exporter TauE/SafE 9 258 8.7E-44 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS11060 c1a93845d80fc95b712a8fafa0c820e1 262 PANTHER PTHR30269 1 260 2.7E-57 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 268 294 8.6E-48 T 14-09-2016 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 8.6E-48 T 14-09-2016 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 447 466 8.6E-48 T 14-09-2016 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 246 267 8.6E-48 T 14-09-2016 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 336 348 8.6E-48 T 14-09-2016 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 661 3.8E-267 T 14-09-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 286 308 2.2E-12 T 14-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 2.2E-12 T 14-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 446 468 2.2E-12 T 14-09-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 Pfam PF00361 Proton-conducting membrane transporter 135 445 6.9E-89 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 123 4.7E-25 T 14-09-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PANTHER PTHR22773:SF50 7 205 1.3E-256 T 14-09-2016 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PANTHER PTHR22773:SF50 228 613 1.3E-256 T 14-09-2016 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PANTHER PTHR22773 7 205 1.3E-256 T 14-09-2016 AMK01_RS08155 206348b82a8395b36ed7ee073c1f318e 666 PANTHER PTHR22773 228 613 1.3E-256 T 14-09-2016 AMK01_RS04970 2bd0eab1e07f54c4b42e41e91d0f0e1b 204 PANTHER PTHR13256:SF24 11 189 7.0E-52 T 14-09-2016 AMK01_RS04970 2bd0eab1e07f54c4b42e41e91d0f0e1b 204 SUPERFAMILY SSF55729 15 191 1.18E-44 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS04970 2bd0eab1e07f54c4b42e41e91d0f0e1b 204 Pfam PF13302 Acetyltransferase (GNAT) domain 24 167 4.7E-19 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS04970 2bd0eab1e07f54c4b42e41e91d0f0e1b 204 PANTHER PTHR13256 11 189 7.0E-52 T 14-09-2016 AMK01_RS04970 2bd0eab1e07f54c4b42e41e91d0f0e1b 204 Gene3D G3DSA:3.40.630.30 14 191 5.8E-50 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS00410 bf9f963d00928ab6602197b30f18866a 387 Gene3D G3DSA:3.20.20.70 83 322 2.5E-4 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS00410 bf9f963d00928ab6602197b30f18866a 387 SUPERFAMILY SSF51569 57 326 7.32E-9 T 14-09-2016 AMK01_RS00410 bf9f963d00928ab6602197b30f18866a 387 Pfam PF06187 Protein of unknown function (DUF993) 6 386 1.4E-188 T 14-09-2016 IPR009334 Protein of unknown function DUF993 AMK01_RS22820 d21d70f7b3e1bcb22e0b30dd61109262 275 Gene3D G3DSA:1.10.287.130 219 273 4.1E-11 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS22820 d21d70f7b3e1bcb22e0b30dd61109262 275 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 273 1.3E-8 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS22820 d21d70f7b3e1bcb22e0b30dd61109262 275 PANTHER PTHR24423 77 275 2.4E-22 T 14-09-2016 AMK01_RS22820 d21d70f7b3e1bcb22e0b30dd61109262 275 Pfam PF12860 PAS fold 99 211 3.2E-6 T 14-09-2016 AMK01_RS22820 d21d70f7b3e1bcb22e0b30dd61109262 275 PANTHER PTHR24423:SF486 77 275 2.4E-22 T 14-09-2016 AMK01_RS22820 d21d70f7b3e1bcb22e0b30dd61109262 275 SUPERFAMILY SSF55785 77 165 1.14E-7 T 14-09-2016 IPR000014 PAS domain AMK01_RS22820 d21d70f7b3e1bcb22e0b30dd61109262 275 Gene3D G3DSA:3.30.450.20 79 164 3.0E-6 T 14-09-2016 AMK01_RS22820 d21d70f7b3e1bcb22e0b30dd61109262 275 SUPERFAMILY SSF47384 212 274 7.26E-12 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS12190 c2d506d8946cfbed8cb034379d180327 324 Gene3D G3DSA:3.40.50.1820 80 294 1.0E-22 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS12190 c2d506d8946cfbed8cb034379d180327 324 SUPERFAMILY SSF53474 33 294 1.59E-23 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS12190 c2d506d8946cfbed8cb034379d180327 324 Pfam PF12697 Alpha/beta hydrolase family 89 272 9.4E-7 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 SUPERFAMILY SSF55347 125 291 1.29E-37 T 14-09-2016 AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 PANTHER PTHR22604 2 329 2.4E-103 T 14-09-2016 AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 Gene3D G3DSA:3.40.50.720 2 132 9.7E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 PANTHER PTHR22604:SF92 2 329 2.4E-103 T 14-09-2016 AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 237 3.7E-10 T 14-09-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 1.8E-24 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 3 327 2.1E-128 T 14-09-2016 IPR030827 Inositol 2-dehydrogenase AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 Gene3D G3DSA:3.30.360.10 133 329 1.4E-58 T 14-09-2016 AMK01_RS16145 38caf8ee619a060ab28569e8468fe63b 330 SUPERFAMILY SSF51735 3 147 1.06E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16935 63578a82c8c976b03877cf17e1bd9636 261 PANTHER PTHR24220 8 233 7.7E-86 T 14-09-2016 AMK01_RS16935 63578a82c8c976b03877cf17e1bd9636 261 SMART SM00382 35 218 3.4E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16935 63578a82c8c976b03877cf17e1bd9636 261 Pfam PF00005 ABC transporter 26 167 1.4E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16935 63578a82c8c976b03877cf17e1bd9636 261 Gene3D G3DSA:3.40.50.300 6 219 5.5E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16935 63578a82c8c976b03877cf17e1bd9636 261 SUPERFAMILY SSF52540 7 232 6.72E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16935 63578a82c8c976b03877cf17e1bd9636 261 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS16935 63578a82c8c976b03877cf17e1bd9636 261 PANTHER PTHR24220:SF454 8 233 7.7E-86 T 14-09-2016 AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 PANTHER PTHR26402 12 230 1.6E-78 T 14-09-2016 AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 230 2.3E-17 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 Pfam PF00072 Response regulator receiver domain 15 122 3.3E-30 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 SMART SM00448 12 122 1.4E-43 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 PANTHER PTHR26402:SF292 12 230 1.6E-78 T 14-09-2016 AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 SMART SM00862 158 230 1.9E-19 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 Gene3D G3DSA:3.40.50.2300 10 131 8.7E-43 T 14-09-2016 AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 Gene3D G3DSA:1.10.10.10 139 231 1.2E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15340 6f29a1be81c732055fc78b8e3b06191f 233 SUPERFAMILY SSF52172 13 175 8.54E-42 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS20395 77537fd36486dcbe486ad4b512be9a59 222 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 56 208 4.1E-44 T 14-09-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AMK01_RS20395 77537fd36486dcbe486ad4b512be9a59 222 SUPERFAMILY SSF89392 46 208 8.24E-28 T 14-09-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMK01_RS20395 77537fd36486dcbe486ad4b512be9a59 222 PANTHER PTHR35869 16 208 2.8E-21 T 14-09-2016 AMK01_RS20395 77537fd36486dcbe486ad4b512be9a59 222 Gene3D G3DSA:2.50.20.10 48 208 1.8E-21 T 14-09-2016 AMK01_RS04210 498a2b719830641aabc0df89e2404d81 231 Gene3D G3DSA:3.40.190.10 3 134 9.8E-29 T 14-09-2016 AMK01_RS04210 498a2b719830641aabc0df89e2404d81 231 PANTHER PTHR21403 3 231 1.9E-61 T 14-09-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMK01_RS04210 498a2b719830641aabc0df89e2404d81 231 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 165 186 - T 14-09-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMK01_RS04210 498a2b719830641aabc0df89e2404d81 231 SUPERFAMILY SSF53850 2 220 1.36E-50 T 14-09-2016 AMK01_RS04210 498a2b719830641aabc0df89e2404d81 231 PANTHER PTHR21403:SF0 3 231 1.9E-61 T 14-09-2016 AMK01_RS04210 498a2b719830641aabc0df89e2404d81 231 Pfam PF01634 ATP phosphoribosyltransferase 54 227 2.0E-39 T 14-09-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMK01_RS04210 498a2b719830641aabc0df89e2404d81 231 Gene3D G3DSA:3.40.190.10 135 196 3.6E-21 T 14-09-2016 AMK01_RS04210 498a2b719830641aabc0df89e2404d81 231 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 207 8.3E-51 T 14-09-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 AMK01_RS20880 381fe7e3d8031f2a40140ac3314b9be4 218 Gene3D G3DSA:3.40.630.30 24 209 6.0E-43 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS20880 381fe7e3d8031f2a40140ac3314b9be4 218 PANTHER PTHR13256 16 213 4.5E-32 T 14-09-2016 AMK01_RS20880 381fe7e3d8031f2a40140ac3314b9be4 218 PANTHER PTHR13256:SF19 16 213 4.5E-32 T 14-09-2016 AMK01_RS20880 381fe7e3d8031f2a40140ac3314b9be4 218 Pfam PF13302 Acetyltransferase (GNAT) domain 41 180 8.3E-27 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS20880 381fe7e3d8031f2a40140ac3314b9be4 218 SUPERFAMILY SSF55729 34 201 1.02E-35 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS06245 c68a97f5ee188670b7d0073ff303df44 304 SUPERFAMILY SSF46626 184 303 2.01E-13 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS06245 c68a97f5ee188670b7d0073ff303df44 304 PANTHER PTHR35008:SF2 1 302 2.8E-82 T 14-09-2016 AMK01_RS06245 c68a97f5ee188670b7d0073ff303df44 304 Pfam PF00034 Cytochrome c 46 150 6.8E-7 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS06245 c68a97f5ee188670b7d0073ff303df44 304 Gene3D G3DSA:1.10.760.10 43 150 2.1E-12 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS06245 c68a97f5ee188670b7d0073ff303df44 304 Gene3D G3DSA:1.10.760.10 192 300 3.5E-8 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS06245 c68a97f5ee188670b7d0073ff303df44 304 PANTHER PTHR35008 1 302 2.8E-82 T 14-09-2016 AMK01_RS06245 c68a97f5ee188670b7d0073ff303df44 304 SUPERFAMILY SSF46626 43 171 1.52E-22 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 Pfam PF00654 Voltage gated chloride channel 89 428 9.3E-62 T 14-09-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 PANTHER PTHR11689 2 591 1.0E-57 T 14-09-2016 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 SUPERFAMILY SSF54631 459 587 1.77E-9 T 14-09-2016 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 PANTHER PTHR11689:SF14 2 591 1.0E-57 T 14-09-2016 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 Gene3D G3DSA:3.10.580.10 457 581 1.5E-9 T 14-09-2016 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 PRINTS PR00762 Chloride channel signature 396 415 3.2E-10 T 14-09-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 PRINTS PR00762 Chloride channel signature 344 364 3.2E-10 T 14-09-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 PRINTS PR00762 Chloride channel signature 181 200 3.2E-10 T 14-09-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 PRINTS PR00762 Chloride channel signature 378 394 3.2E-10 T 14-09-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 Gene3D G3DSA:1.10.3080.10 26 452 2.1E-60 T 14-09-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 AMK01_RS12750 3b35bde664dec93eb1a4980d4631c968 596 SUPERFAMILY SSF81340 19 451 2.22E-82 T 14-09-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 Gene3D G3DSA:1.10.150.130 112 206 1.5E-7 T 14-09-2016 IPR023109 Integrase/recombinase, N-terminal AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 PANTHER PTHR30349:SF20 253 443 3.4E-35 T 14-09-2016 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 PANTHER PTHR30349:SF20 107 227 3.4E-35 T 14-09-2016 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 SUPERFAMILY SSF56349 262 421 1.41E-48 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 SUPERFAMILY SSF56349 111 231 1.41E-48 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 Pfam PF00589 Phage integrase family 263 415 2.1E-18 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 Gene3D G3DSA:1.10.443.10 214 421 6.1E-36 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 PANTHER PTHR30349 253 443 3.4E-35 T 14-09-2016 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 PANTHER PTHR30349 107 227 3.4E-35 T 14-09-2016 AMK01_RS00635 7d5595c938559e7f45273e917757b0a5 450 Pfam PF13356 Domain of unknown function (DUF4102) 20 106 1.2E-12 T 14-09-2016 IPR025166 Domain of unknown function DUF4102 AMK01_RS10245 9d7aa5a3bec208105313abad8af8950c 270 Pfam PF00149 Calcineurin-like phosphoesterase 1 235 5.3E-10 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS10245 9d7aa5a3bec208105313abad8af8950c 270 PANTHER PTHR37844 1 269 3.3E-25 T 14-09-2016 AMK01_RS10245 9d7aa5a3bec208105313abad8af8950c 270 Gene3D G3DSA:3.60.21.10 1 70 3.1E-18 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS10245 9d7aa5a3bec208105313abad8af8950c 270 Gene3D G3DSA:3.60.21.10 161 250 3.1E-18 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS10245 9d7aa5a3bec208105313abad8af8950c 270 SUPERFAMILY SSF56300 169 261 8.77E-27 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS10245 9d7aa5a3bec208105313abad8af8950c 270 SUPERFAMILY SSF56300 1 115 8.77E-27 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS13680 3cf199182bf5cf3a3c8c42e3dce01a50 148 Pfam PF13767 Domain of unknown function (DUF4168) 57 134 4.0E-17 T 14-09-2016 IPR025433 Domain of unknown function DUF4168 AMK01_RS14450 a43a575e6f7f004dd07ea1d8cda375f9 516 PANTHER PTHR30029 7 516 7.2E-201 T 14-09-2016 AMK01_RS14450 a43a575e6f7f004dd07ea1d8cda375f9 516 Pfam PF04293 SpoVR like protein 17 455 1.0E-166 T 14-09-2016 IPR007390 Sporulation stage V, protein R AMK01_RS14450 a43a575e6f7f004dd07ea1d8cda375f9 516 PANTHER PTHR30029:SF2 7 516 7.2E-201 T 14-09-2016 AMK01_RS16630 306f1d1a43254efb9abe906e908f8a7f 697 PANTHER PTHR23028 7 488 5.9E-86 T 14-09-2016 AMK01_RS16630 306f1d1a43254efb9abe906e908f8a7f 697 SUPERFAMILY SSF52266 514 563 1.23E-5 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS16630 306f1d1a43254efb9abe906e908f8a7f 697 SUPERFAMILY SSF52266 594 666 1.23E-5 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS16630 306f1d1a43254efb9abe906e908f8a7f 697 PANTHER PTHR23028:SF53 7 488 5.9E-86 T 14-09-2016 AMK01_RS16630 306f1d1a43254efb9abe906e908f8a7f 697 Pfam PF01757 Acyltransferase family 11 334 4.0E-22 T 14-09-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 PANTHER PTHR10366:SF32 303 350 1.0E-209 T 14-09-2016 AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 6 349 57.074 T 14-09-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 PANTHER PTHR10366:SF32 7 285 1.0E-209 T 14-09-2016 AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 SUPERFAMILY SSF51735 6 345 1.03E-81 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 Gene3D G3DSA:3.40.50.720 4 193 1.3E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 6 346 1.1E-189 T 14-09-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 339 7.6E-161 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 PANTHER PTHR10366 7 285 1.0E-209 T 14-09-2016 AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 Gene3D G3DSA:3.90.25.10 196 250 8.6E-51 T 14-09-2016 AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 Gene3D G3DSA:3.90.25.10 297 350 8.6E-51 T 14-09-2016 AMK01_RS06890 5a9d29fc459a380007a7903f5ecd7f7d 363 PANTHER PTHR10366 303 350 1.0E-209 T 14-09-2016 AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 SMART SM00382 376 562 2.1E-19 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 PANTHER PTHR24221 19 594 3.1E-222 T 14-09-2016 AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 SUPERFAMILY SSF90123 22 340 6.67E-62 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 Gene3D G3DSA:1.20.1560.10 29 340 5.1E-61 T 14-09-2016 AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 Pfam PF00005 ABC transporter 367 516 5.8E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 Gene3D G3DSA:3.40.50.300 351 574 3.9E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 SUPERFAMILY SSF52540 342 587 1.49E-92 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01010 c5ea9d954fe64251c3670abed950dd59 595 Pfam PF00664 ABC transporter transmembrane region 37 298 9.6E-36 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS02175 4f4dda4c728da73a6ba0474cff3c72dd 212 PANTHER PTHR11839:SF9 1 201 2.5E-16 T 14-09-2016 AMK01_RS02175 4f4dda4c728da73a6ba0474cff3c72dd 212 SUPERFAMILY SSF55811 19 204 7.58E-28 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS02175 4f4dda4c728da73a6ba0474cff3c72dd 212 PANTHER PTHR11839 1 201 2.5E-16 T 14-09-2016 AMK01_RS02175 4f4dda4c728da73a6ba0474cff3c72dd 212 Gene3D G3DSA:3.90.79.10 20 207 4.5E-36 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS02175 4f4dda4c728da73a6ba0474cff3c72dd 212 Pfam PF00293 NUDIX domain 63 170 3.9E-11 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS10445 29ecdb5346cba17954aea74841e1ad35 468 SUPERFAMILY SSF55103 221 444 6.21E-7 T 14-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK01_RS10445 29ecdb5346cba17954aea74841e1ad35 468 SUPERFAMILY SSF56176 16 215 2.29E-41 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS10445 29ecdb5346cba17954aea74841e1ad35 468 PANTHER PTHR11748 3 339 5.4E-44 T 14-09-2016 AMK01_RS10445 29ecdb5346cba17954aea74841e1ad35 468 Gene3D G3DSA:3.30.43.10 6 101 2.8E-19 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK01_RS10445 29ecdb5346cba17954aea74841e1ad35 468 PANTHER PTHR11748:SF35 3 339 5.4E-44 T 14-09-2016 AMK01_RS10445 29ecdb5346cba17954aea74841e1ad35 468 Pfam PF01565 FAD binding domain 47 180 1.2E-29 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS10445 29ecdb5346cba17954aea74841e1ad35 468 Gene3D G3DSA:3.30.465.10 109 214 1.3E-9 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS20805 85bf5d03af510c1adfd0e0078d53ad2d 477 PANTHER PTHR39479 6 473 2.4E-255 T 14-09-2016 AMK01_RS20805 85bf5d03af510c1adfd0e0078d53ad2d 477 Pfam PF07063 Domain of unknown function (DUF1338) 18 419 5.7E-119 T 14-09-2016 IPR009770 Domain of unknown function DUF1338 AMK01_RS20805 85bf5d03af510c1adfd0e0078d53ad2d 477 SMART SM01150 19 419 6.0E-232 T 14-09-2016 IPR009770 Domain of unknown function DUF1338 AMK01_RS20805 85bf5d03af510c1adfd0e0078d53ad2d 477 PANTHER PTHR39479:SF2 6 473 2.4E-255 T 14-09-2016 AMK01_RS20530 7c359cd83b2af60981759e50c99b0376 412 PIRSF PIRSF028704 2 398 4.1E-98 T 14-09-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC AMK01_RS20530 7c359cd83b2af60981759e50c99b0376 412 Pfam PF10129 OpgC protein 23 377 2.9E-108 T 14-09-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC AMK01_RS20530 7c359cd83b2af60981759e50c99b0376 412 PANTHER PTHR38592 19 378 2.8E-57 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 PANTHER PTHR11360 92 310 3.1E-139 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 PANTHER PTHR11360 332 497 3.1E-139 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 PANTHER PTHR11360:SF135 26 69 3.1E-139 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 PANTHER PTHR11360:SF135 332 497 3.1E-139 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 PANTHER PTHR11360 26 69 3.1E-139 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 SUPERFAMILY SSF103473 26 489 1.03E-43 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 PANTHER PTHR11360:SF135 92 310 3.1E-139 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 Gene3D G3DSA:1.20.1250.20 30 246 5.4E-17 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 Gene3D G3DSA:1.20.1250.20 272 486 7.0E-11 T 14-09-2016 AMK01_RS19815 47fd86c840cf3cd6a6d1b4977330a316 552 Pfam PF07690 Major Facilitator Superfamily 41 439 4.2E-38 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 4.9E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 4.9E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 14-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 PANTHER PTHR30055:SF10 8 199 3.5E-26 T 14-09-2016 AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 SUPERFAMILY SSF46689 10 80 3.07E-18 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 PANTHER PTHR30055 8 199 3.5E-26 T 14-09-2016 AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 1.1E-16 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 Gene3D G3DSA:1.10.357.10 64 193 2.4E-19 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS13620 1b9c6e7a78d52888127a235a35df2ba7 199 Gene3D G3DSA:1.10.10.60 11 63 2.1E-20 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS12320 4adb353ddb77387a4dba0170c3cf919f 138 Pfam PF02566 OsmC-like protein 43 135 7.3E-17 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS12320 4adb353ddb77387a4dba0170c3cf919f 138 PANTHER PTHR33797 2 133 2.4E-61 T 14-09-2016 AMK01_RS12320 4adb353ddb77387a4dba0170c3cf919f 138 SUPERFAMILY SSF82784 5 137 1.57E-37 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS12320 4adb353ddb77387a4dba0170c3cf919f 138 Gene3D G3DSA:2.20.25.10 3 46 2.4E-17 T 14-09-2016 AMK01_RS12320 4adb353ddb77387a4dba0170c3cf919f 138 Gene3D G3DSA:3.30.300.20 47 137 3.9E-33 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS12320 4adb353ddb77387a4dba0170c3cf919f 138 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 137 6.9E-48 T 14-09-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AMK01_RS12320 4adb353ddb77387a4dba0170c3cf919f 138 PANTHER PTHR33797:SF3 2 133 2.4E-61 T 14-09-2016 AMK01_RS11755 b32ca1841cca7c4b29c1525acdba662d 222 PANTHER PTHR30614 1 222 1.7E-99 T 14-09-2016 AMK01_RS11755 b32ca1841cca7c4b29c1525acdba662d 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 215 9.8E-16 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11755 b32ca1841cca7c4b29c1525acdba662d 222 SUPERFAMILY SSF161098 15 202 2.88E-39 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11755 b32ca1841cca7c4b29c1525acdba662d 222 Gene3D G3DSA:1.10.3720.10 13 214 4.5E-39 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS11755 b32ca1841cca7c4b29c1525acdba662d 222 PANTHER PTHR30614:SF18 1 222 1.7E-99 T 14-09-2016 AMK01_RS11755 b32ca1841cca7c4b29c1525acdba662d 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 1.2E-29 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS14660 998db33daf2248e74565509aab886ba5 145 PANTHER PTHR34701 4 133 3.3E-16 T 14-09-2016 AMK01_RS14660 998db33daf2248e74565509aab886ba5 145 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 145 32.743 T 14-09-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMK01_RS14660 998db33daf2248e74565509aab886ba5 145 SUPERFAMILY SSF89447 1 136 1.15E-31 T 14-09-2016 AMK01_RS14660 998db33daf2248e74565509aab886ba5 145 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 7 117 2.0E-8 T 14-09-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMK01_RS14660 998db33daf2248e74565509aab886ba5 145 Pfam PF02381 MraZ protein, putative antitoxin-like 82 133 1.7E-6 T 14-09-2016 IPR020603 MraZ domain AMK01_RS07325 d11964426325f1a8a5b01fb9d36f1868 211 PANTHER PTHR30086:SF3 4 211 6.2E-65 T 14-09-2016 AMK01_RS07325 d11964426325f1a8a5b01fb9d36f1868 211 Pfam PF01810 LysE type translocator 18 209 2.9E-32 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS07325 d11964426325f1a8a5b01fb9d36f1868 211 PANTHER PTHR30086 4 211 6.2E-65 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS07325 d11964426325f1a8a5b01fb9d36f1868 211 PIRSF PIRSF006324 3 211 2.8E-67 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS17515 22536f6331fad3b12a79a1f1c9055688 404 PANTHER PTHR11993 16 399 2.4E-198 T 14-09-2016 AMK01_RS17515 22536f6331fad3b12a79a1f1c9055688 404 PANTHER PTHR11993:SF28 16 399 2.4E-198 T 14-09-2016 AMK01_RS17515 22536f6331fad3b12a79a1f1c9055688 404 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 19 404 8.8E-185 T 14-09-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AMK01_RS17515 22536f6331fad3b12a79a1f1c9055688 404 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 11 404 49.134 T 14-09-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 AMK01_RS17515 22536f6331fad3b12a79a1f1c9055688 404 Gene3D G3DSA:1.10.645.10 237 400 1.3E-21 T 14-09-2016 IPR029014 NiFe hydrogenase-like AMK01_RS17515 22536f6331fad3b12a79a1f1c9055688 404 SUPERFAMILY SSF56762 29 403 1.44E-135 T 14-09-2016 IPR029014 NiFe hydrogenase-like AMK01_RS17515 22536f6331fad3b12a79a1f1c9055688 404 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 133 404 5.9E-114 T 14-09-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 AMK01_RS17515 22536f6331fad3b12a79a1f1c9055688 404 Gene3D G3DSA:1.10.645.10 16 236 2.4E-46 T 14-09-2016 IPR029014 NiFe hydrogenase-like AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 Gene3D G3DSA:2.30.30.60 170 219 2.4E-10 T 14-09-2016 AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 Pfam PF00924 Mechanosensitive ion channel 116 310 7.4E-30 T 14-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 PANTHER PTHR30221 37 352 1.7E-25 T 14-09-2016 AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 SUPERFAMILY SSF50182 154 220 1.77E-12 T 14-09-2016 IPR010920 LSM domain AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 SUPERFAMILY SSF51206 341 466 2.75E-22 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 SMART SM00100 347 460 1.1E-12 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 Pfam PF00027 Cyclic nucleotide-binding domain 366 447 1.5E-12 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 SUPERFAMILY SSF82689 225 315 2.75E-8 T 14-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 PIRSF PIRSF026673 2 490 1.8E-198 T 14-09-2016 IPR016846 Predicted ion channel, cNMP-binding AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 Gene3D G3DSA:3.30.70.100 230 309 1.1E-4 T 14-09-2016 AMK01_RS14245 1e037ec7bd3270e9903d4b62023cec99 493 Gene3D G3DSA:2.60.120.10 341 468 8.6E-22 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS16465 b176b0b665bfeba9e89e9d0ebdb3a308 332 PANTHER PTHR32196 11 332 1.7E-84 T 14-09-2016 AMK01_RS16465 b176b0b665bfeba9e89e9d0ebdb3a308 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 320 1.6E-42 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS16465 b176b0b665bfeba9e89e9d0ebdb3a308 332 PANTHER PTHR32196:SF21 11 332 1.7E-84 T 14-09-2016 AMK01_RS18305 4738e34a5e428b6ea59c5172e693e87d 618 Gene3D G3DSA:3.30.1380.10 86 206 3.5E-25 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS18305 4738e34a5e428b6ea59c5172e693e87d 618 PANTHER PTHR37425 4 543 7.4E-48 T 14-09-2016 AMK01_RS18305 4738e34a5e428b6ea59c5172e693e87d 618 SUPERFAMILY SSF55166 86 208 4.32E-31 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS18305 4738e34a5e428b6ea59c5172e693e87d 618 Pfam PF05951 Bacterial protein of unknown function (DUF882) 51 204 9.7E-74 T 14-09-2016 IPR010275 Protein of unknown function DUF882 AMK01_RS01675 b6722118b0646db91331dcbfc05fde1b 212 SUPERFAMILY SSF53167 29 201 9.82E-30 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS01675 b6722118b0646db91331dcbfc05fde1b 212 Gene3D G3DSA:3.40.50.1580 28 185 7.9E-29 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS01675 b6722118b0646db91331dcbfc05fde1b 212 TIGRFAM TIGR01705 MTA/SAH-nuc-hyp: putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 210 4.8E-104 T 14-09-2016 IPR010050 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative AMK01_RS01675 b6722118b0646db91331dcbfc05fde1b 212 Pfam PF01048 Phosphorylase superfamily 137 176 2.2E-6 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS19510 e760a4b0fbe6caa6fdd00f78c2ea413e 220 PANTHER PTHR10438:SF244 98 143 5.6E-15 T 14-09-2016 AMK01_RS19510 e760a4b0fbe6caa6fdd00f78c2ea413e 220 SUPERFAMILY SSF52833 65 215 7.89E-29 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19510 e760a4b0fbe6caa6fdd00f78c2ea413e 220 ProSitePatterns PS00194 Thioredoxin family active site. 103 121 - T 14-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMK01_RS19510 e760a4b0fbe6caa6fdd00f78c2ea413e 220 PANTHER PTHR10438 98 143 5.6E-15 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK01_RS19510 e760a4b0fbe6caa6fdd00f78c2ea413e 220 Gene3D G3DSA:3.40.30.10 16 38 3.6E-33 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19510 e760a4b0fbe6caa6fdd00f78c2ea413e 220 Gene3D G3DSA:3.40.30.10 72 218 3.6E-33 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19510 e760a4b0fbe6caa6fdd00f78c2ea413e 220 Pfam PF08534 Redoxin 81 213 2.2E-18 T 14-09-2016 IPR013740 Redoxin GO:0016491 AMK01_RS03625 1eb47ca7a19a8e376868cf77a64908b5 141 Pfam PF03963 Flagellar hook capping protein - N-terminal region 5 74 5.0E-23 T 14-09-2016 IPR005648 Flagellar hook capping protein AMK01_RS03625 1eb47ca7a19a8e376868cf77a64908b5 141 SUPERFAMILY SSF117143 67 134 4.84E-5 T 14-09-2016 AMK01_RS03625 1eb47ca7a19a8e376868cf77a64908b5 141 PANTHER PTHR30435 11 92 2.5E-16 T 14-09-2016 AMK01_RS25595 41dac1b0bdeda792151969893ea4119c 167 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 26 163 2.4E-42 T 14-09-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS25595 41dac1b0bdeda792151969893ea4119c 167 SUPERFAMILY SSF55347 25 135 1.07E-34 T 14-09-2016 AMK01_RS25595 41dac1b0bdeda792151969893ea4119c 167 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 49 66 - T 14-09-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS25595 41dac1b0bdeda792151969893ea4119c 167 PANTHER PTHR20836 1 167 3.5E-53 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS25595 41dac1b0bdeda792151969893ea4119c 167 SUPERFAMILY SSF51735 2 24 6.3E-11 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS25595 41dac1b0bdeda792151969893ea4119c 167 SUPERFAMILY SSF51735 135 165 6.3E-11 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS25595 41dac1b0bdeda792151969893ea4119c 167 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 164 1.0E-52 T 14-09-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS25595 41dac1b0bdeda792151969893ea4119c 167 Gene3D G3DSA:3.30.360.10 25 132 1.9E-37 T 14-09-2016 AMK01_RS07155 b463da5a0c544f0811738ff3e5b9b390 176 Gene3D G3DSA:3.90.190.10 63 134 7.3E-8 T 14-09-2016 IPR029021 Protein-tyrosine phosphatase-like AMK01_RS07155 b463da5a0c544f0811738ff3e5b9b390 176 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 87 97 - T 14-09-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 AMK01_RS07155 b463da5a0c544f0811738ff3e5b9b390 176 SUPERFAMILY SSF52799 61 139 1.56E-12 T 14-09-2016 IPR029021 Protein-tyrosine phosphatase-like AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 SUPERFAMILY SSF52540 7 192 1.85E-34 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 SUPERFAMILY SSF90002 268 364 8.24E-21 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 SMART SM00833 268 364 4.7E-30 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 PANTHER PTHR13748 5 214 7.1E-90 T 14-09-2016 AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 PANTHER PTHR13748 232 376 7.1E-90 T 14-09-2016 AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 268 364 2.2E-19 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 Gene3D G3DSA:3.30.1220.10 235 364 5.3E-26 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 188 1.4E-47 T 14-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS19695 4c6393bc65a56f9d5f1ea3ea5ebee53a 389 Gene3D G3DSA:3.40.50.300 6 197 8.1E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 Gene3D G3DSA:1.10.860.10 22 122 7.3E-25 T 14-09-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 SMART SM00382 216 435 3.0E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 PANTHER PTHR30153 448 496 1.2E-161 T 14-09-2016 AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 PANTHER PTHR30153 5 430 1.2E-161 T 14-09-2016 AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 Gene3D G3DSA:3.40.50.300 192 488 3.0E-93 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 488 2.6E-152 T 14-09-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 SUPERFAMILY SSF52540 197 426 4.66E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 SUPERFAMILY SSF52540 453 478 4.66E-49 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 8.3E-26 T 14-09-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 Pfam PF03796 DnaB-like helicase C terminal domain 199 486 8.6E-101 T 14-09-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 AMK01_RS07350 59ef8b877e31915e8ed69db2d59e6275 498 SUPERFAMILY SSF48024 19 130 5.49E-29 T 14-09-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMK01_RS18030 1aaee410ff757678590cfee052522992 490 PANTHER PTHR37957 12 487 6.2E-80 T 14-09-2016 AMK01_RS18030 1aaee410ff757678590cfee052522992 490 Pfam PF13449 Esterase-like activity of phytase 56 454 1.4E-37 T 14-09-2016 IPR027372 Phytase-like domain AMK01_RS20155 b8a2a9118c2e77ea498bf228d6b9c386 152 Pfam PF07883 Cupin domain 36 107 2.2E-15 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS20155 b8a2a9118c2e77ea498bf228d6b9c386 152 Gene3D G3DSA:2.60.120.10 30 151 4.1E-22 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS20155 b8a2a9118c2e77ea498bf228d6b9c386 152 SUPERFAMILY SSF51182 13 115 6.16E-21 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS06045 6d7ca3b7f4c8f0f627ffcfd98a5cf6bb 140 PANTHER PTHR33797:SF2 1 139 4.3E-62 T 14-09-2016 AMK01_RS06045 6d7ca3b7f4c8f0f627ffcfd98a5cf6bb 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 139 2.9E-53 T 14-09-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AMK01_RS06045 6d7ca3b7f4c8f0f627ffcfd98a5cf6bb 140 SUPERFAMILY SSF82784 1 139 2.62E-42 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS06045 6d7ca3b7f4c8f0f627ffcfd98a5cf6bb 140 Gene3D G3DSA:3.30.300.20 45 139 1.4E-34 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS06045 6d7ca3b7f4c8f0f627ffcfd98a5cf6bb 140 PANTHER PTHR33797 1 139 4.3E-62 T 14-09-2016 AMK01_RS06045 6d7ca3b7f4c8f0f627ffcfd98a5cf6bb 140 Gene3D G3DSA:2.20.25.10 1 44 7.0E-19 T 14-09-2016 AMK01_RS06045 6d7ca3b7f4c8f0f627ffcfd98a5cf6bb 140 Pfam PF02566 OsmC-like protein 41 135 1.4E-17 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 PANTHER PTHR34824 3 357 3.1E-95 T 14-09-2016 AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 14 351 28.374 T 14-09-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 SUPERFAMILY SSF46785 15 95 2.31E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 Pfam PF01628 HrcA protein C terminal domain 119 344 1.2E-51 T 14-09-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 Gene3D G3DSA:3.30.450.40 191 357 1.4E-33 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 16 357 2.4E-95 T 14-09-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 Gene3D G3DSA:1.10.10.10 9 97 9.0E-33 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 SUPERFAMILY SSF55781 85 357 7.85E-53 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS01995 085bdb61d0bbc77a8c7fde4d1c56f797 362 PIRSF PIRSF005485 12 361 6.0E-99 T 14-09-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 SMART SM00490 280 365 4.2E-15 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 PANTHER PTHR24031 263 383 9.5E-60 T 14-09-2016 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 PANTHER PTHR24031 30 236 9.5E-60 T 14-09-2016 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 PANTHER PTHR24031:SF122 757 790 9.5E-60 T 14-09-2016 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 PANTHER PTHR24031:SF122 30 236 9.5E-60 T 14-09-2016 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 SMART SM00487 23 239 6.6E-27 T 14-09-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 PANTHER PTHR24031:SF122 263 383 9.5E-60 T 14-09-2016 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 Gene3D G3DSA:3.40.50.300 12 204 2.2E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 PANTHER PTHR24031 757 790 9.5E-60 T 14-09-2016 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 Pfam PF08494 DEAD/H associated 613 802 1.5E-47 T 14-09-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 Pfam PF00271 Helicase conserved C-terminal domain 264 360 4.5E-15 T 14-09-2016 IPR001650 Helicase, C-terminal AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 15 830 0.0 T 14-09-2016 IPR026362 DEXH box helicase, DNA ligase-associated AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 Pfam PF00270 DEAD/DEAH box helicase 30 204 4.2E-24 T 14-09-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 PIRSF PIRSF037307 3 836 2.4E-216 T 14-09-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 SUPERFAMILY SSF52540 39 205 1.09E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 SUPERFAMILY SSF52540 238 373 1.09E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02905 7d3fe0a61c85f548d961e73fe2a3468f 836 Gene3D G3DSA:3.40.50.300 256 408 3.2E-28 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01970 7dd440aa9df578046b5efd671246b5f5 360 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 93 1.6E-6 T 14-09-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMK01_RS01970 7dd440aa9df578046b5efd671246b5f5 360 Gene3D G3DSA:3.40.50.720 5 133 1.5E-12 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01970 7dd440aa9df578046b5efd671246b5f5 360 SUPERFAMILY SSF51735 4 167 1.04E-14 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01970 7dd440aa9df578046b5efd671246b5f5 360 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 118 338 8.8E-17 T 14-09-2016 IPR032095 Saccharopine dehydrogenase, C-terminal AMK01_RS01970 7dd440aa9df578046b5efd671246b5f5 360 SUPERFAMILY SSF55347 119 343 1.57E-42 T 14-09-2016 AMK01_RS01970 7dd440aa9df578046b5efd671246b5f5 360 Gene3D G3DSA:3.30.360.10 134 310 7.5E-22 T 14-09-2016 AMK01_RS17410 fb641c14f11c707768ded5efc3640697 313 Pfam PF13641 Glycosyltransferase like family 2 11 195 5.7E-8 T 14-09-2016 AMK01_RS17410 fb641c14f11c707768ded5efc3640697 313 Gene3D G3DSA:3.90.550.10 67 210 2.0E-11 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS17410 fb641c14f11c707768ded5efc3640697 313 SUPERFAMILY SSF53448 11 215 2.44E-22 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS03920 32a3f407cf01962da76e4328dc9aa27b 303 PANTHER PTHR22572 9 295 1.9E-166 T 14-09-2016 AMK01_RS03920 32a3f407cf01962da76e4328dc9aa27b 303 PANTHER PTHR22572:SF105 9 295 1.9E-166 T 14-09-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AMK01_RS03920 32a3f407cf01962da76e4328dc9aa27b 303 Pfam PF00483 Nucleotidyl transferase 9 245 6.6E-67 T 14-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK01_RS03920 32a3f407cf01962da76e4328dc9aa27b 303 Gene3D G3DSA:3.90.550.10 8 271 1.4E-63 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS03920 32a3f407cf01962da76e4328dc9aa27b 303 SUPERFAMILY SSF53448 8 293 6.68E-86 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS03920 32a3f407cf01962da76e4328dc9aa27b 303 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 9 293 2.4E-148 T 14-09-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 SUPERFAMILY SSF52317 243 428 4.59E-28 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 Gene3D G3DSA:3.40.50.880 243 427 3.7E-25 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 1 433 40.156 T 14-09-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 PANTHER PTHR21343 1 428 3.1E-120 T 14-09-2016 AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 5 427 4.4E-96 T 14-09-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 243 428 1.5E-34 T 14-09-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 PANTHER PTHR21343:SF6 1 428 3.1E-120 T 14-09-2016 AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 SUPERFAMILY SSF52540 1 194 5.32E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 180 4.0E-20 T 14-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK01_RS12705 4e5e0a087ff6b731ab47340a0553f17f 435 Gene3D G3DSA:3.40.50.300 1 192 7.4E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04795 786332ffe00dd7c704b16507d70d86a4 345 Gene3D G3DSA:3.20.20.370 219 299 3.8E-20 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS04795 786332ffe00dd7c704b16507d70d86a4 345 Gene3D G3DSA:3.20.20.370 87 137 3.8E-20 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS04795 786332ffe00dd7c704b16507d70d86a4 345 PANTHER PTHR34216 5 151 6.6E-45 T 14-09-2016 AMK01_RS04795 786332ffe00dd7c704b16507d70d86a4 345 PANTHER PTHR34216 214 338 6.6E-45 T 14-09-2016 AMK01_RS04795 786332ffe00dd7c704b16507d70d86a4 345 Pfam PF01522 Polysaccharide deacetylase 95 290 2.0E-24 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS04795 786332ffe00dd7c704b16507d70d86a4 345 SUPERFAMILY SSF88713 219 311 2.05E-30 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS04795 786332ffe00dd7c704b16507d70d86a4 345 SUPERFAMILY SSF88713 59 137 2.05E-30 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS06085 356e139baa4c801e8ac069d2822dd67a 518 PANTHER PTHR30121 22 449 1.4E-170 T 14-09-2016 AMK01_RS06085 356e139baa4c801e8ac069d2822dd67a 518 PANTHER PTHR30121:SF3 22 449 1.4E-170 T 14-09-2016 AMK01_RS06085 356e139baa4c801e8ac069d2822dd67a 518 Pfam PF05872 Bacterial protein of unknown function (DUF853) 15 516 7.9E-242 T 14-09-2016 IPR033186 Helicase HerA-like C-terminal AMK01_RS06085 356e139baa4c801e8ac069d2822dd67a 518 Gene3D G3DSA:3.40.50.300 212 389 1.2E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06085 356e139baa4c801e8ac069d2822dd67a 518 Gene3D G3DSA:3.40.50.300 9 116 1.2E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06085 356e139baa4c801e8ac069d2822dd67a 518 SUPERFAMILY SSF52540 20 390 3.14E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05995 58de1fc33af4cb429ea159858b95109d 336 Gene3D G3DSA:3.60.15.10 27 187 3.7E-16 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS05995 58de1fc33af4cb429ea159858b95109d 336 SUPERFAMILY SSF56281 4 317 1.05E-64 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS05995 58de1fc33af4cb429ea159858b95109d 336 PANTHER PTHR11203 1 225 1.7E-89 T 14-09-2016 AMK01_RS05995 58de1fc33af4cb429ea159858b95109d 336 PANTHER PTHR11203:SF35 1 225 1.7E-89 T 14-09-2016 AMK01_RS05995 58de1fc33af4cb429ea159858b95109d 336 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 6 334 2.6E-145 T 14-09-2016 IPR026360 Putative exonuclease, DNA ligase-associated AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 SUPERFAMILY SSF56219 1 260 7.33E-82 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 216 227 - T 14-09-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 PANTHER PTHR22748 1 260 7.7E-121 T 14-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 PANTHER PTHR22748:SF9 1 260 7.7E-121 T 14-09-2016 AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 Gene3D G3DSA:3.60.10.10 1 260 4.3E-79 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 252 8.7E-28 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 258 1.3E-74 T 14-09-2016 AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-09-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMK01_RS09160 0d59845d76fbd906309f0cfb60ca4c2f 263 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 259 4.4E-70 T 14-09-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 7 287 41.163 T 14-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 SUPERFAMILY SSF54211 8 129 4.48E-36 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 Gene3D G3DSA:3.30.230.20 9 129 1.8E-39 T 14-09-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 Gene3D G3DSA:3.30.1700.10 135 289 1.1E-50 T 14-09-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 SUPERFAMILY SSF54211 140 285 4.55E-42 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 9 300 2.7E-89 T 14-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 9 282 2.8E-95 T 14-09-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 PANTHER PTHR33694 9 302 1.3E-99 T 14-09-2016 AMK01_RS14575 953e34c85718d7eb603a5e7808bbe53e 318 PANTHER PTHR33694:SF1 9 302 1.3E-99 T 14-09-2016 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 Gene3D G3DSA:1.10.260.40 98 160 7.2E-13 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 Pfam PF13411 MerR HTH family regulatory protein 9 77 1.5E-17 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 PANTHER PTHR10245:SF9 64 269 8.6E-28 T 14-09-2016 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 PANTHER PTHR10245 64 269 8.6E-28 T 14-09-2016 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 Pfam PF13560 Helix-turn-helix domain 93 149 4.5E-10 T 14-09-2016 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 SUPERFAMILY SSF47413 93 159 9.29E-11 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 SMART SM00422 9 78 1.1E-14 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 Gene3D G3DSA:1.10.1660.10 9 97 5.6E-20 T 14-09-2016 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 Pfam PF07883 Cupin domain 194 263 4.5E-17 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 SMART SM00530 96 151 2.8E-6 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 SUPERFAMILY SSF46955 9 77 2.33E-17 T 14-09-2016 IPR009061 Putative DNA-binding domain AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 Gene3D G3DSA:2.60.120.10 161 267 8.1E-22 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS00485 0a3eb41d87fea46fe1eba9984b945312 269 SUPERFAMILY SSF51182 148 269 3.66E-27 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS20700 3d45f73c19ac27592cc6100d7eeb273c 618 SUPERFAMILY SSF90123 46 358 4.45E-18 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS20700 3d45f73c19ac27592cc6100d7eeb273c 618 Pfam PF06472 ABC transporter transmembrane region 2 37 312 3.0E-33 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS20700 3d45f73c19ac27592cc6100d7eeb273c 618 Gene3D G3DSA:1.20.1560.10 48 358 1.0E-15 T 14-09-2016 AMK01_RS20700 3d45f73c19ac27592cc6100d7eeb273c 618 PANTHER PTHR11384 6 540 2.8E-87 T 14-09-2016 AMK01_RS20700 3d45f73c19ac27592cc6100d7eeb273c 618 SUPERFAMILY SSF52540 407 568 5.09E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20700 3d45f73c19ac27592cc6100d7eeb273c 618 PANTHER PTHR11384:SF3 6 540 2.8E-87 T 14-09-2016 AMK01_RS20700 3d45f73c19ac27592cc6100d7eeb273c 618 Gene3D G3DSA:3.40.50.300 408 567 7.7E-15 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS05925 52a18f243a5b43ee269fe5482329cbb9 153 PIRSF PIRSF029509 1 148 6.1E-46 T 14-09-2016 IPR016923 Uncharacterised conserved protein UCP029509, membrane AMK01_RS05925 52a18f243a5b43ee269fe5482329cbb9 153 Pfam PF09990 Predicted membrane protein (DUF2231) 44 143 8.1E-24 T 14-09-2016 IPR019251 Domain of unknown function DUF2231, transmembrane AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 Pfam PF02384 N-6 DNA Methylase 150 402 4.8E-66 T 14-09-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 SUPERFAMILY SSF53335 5 83 1.31E-104 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 SUPERFAMILY SSF53335 115 401 1.31E-104 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 PANTHER PTHR30195:SF2 33 47 4.0E-79 T 14-09-2016 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 PANTHER PTHR30195 33 47 4.0E-79 T 14-09-2016 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 285 291 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 Pfam PF12161 HsdM N-terminal domain 7 47 1.3E-6 T 14-09-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 PANTHER PTHR30195 71 398 4.0E-79 T 14-09-2016 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 198 212 6.4E-21 T 14-09-2016 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 174 190 6.4E-21 T 14-09-2016 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 282 294 6.4E-21 T 14-09-2016 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 311 335 6.4E-21 T 14-09-2016 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 PANTHER PTHR30195:SF2 71 398 4.0E-79 T 14-09-2016 AMK01_RS05170 f95c3da898441fb5d249015c0e1eb9e3 420 Gene3D G3DSA:3.40.50.150 176 396 1.6E-35 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 SUPERFAMILY SSF51735 5 251 2.98E-78 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 Gene3D G3DSA:3.40.50.720 1 251 7.8E-81 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PANTHER PTHR24321:SF6 2 251 4.1E-46 T 14-09-2016 AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PANTHER PTHR24321 2 251 4.1E-46 T 14-09-2016 AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 1.8E-65 T 14-09-2016 AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.3E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.3E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.9E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.9E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 4.9E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.9E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.9E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS01890 4f6db93d136999a2aae78e0637dd98f8 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.9E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 Pfam PF01019 Gamma-glutamyltranspeptidase 32 525 2.1E-140 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PANTHER PTHR11686 9 530 8.0E-175 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 SUPERFAMILY SSF56235 4 530 3.67E-164 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 17 522 3.6E-112 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 128 147 2.8E-37 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 39 64 2.8E-37 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 374 392 2.8E-37 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 110 128 2.8E-37 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 226 242 2.8E-37 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 420 2.8E-37 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 255 274 2.8E-37 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 350 368 2.8E-37 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS11000 83c18f48658fffef6461ae0602c604b1 530 PANTHER PTHR11686:SF8 9 530 8.0E-175 T 14-09-2016 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 PANTHER PTHR22773 1 492 1.1E-215 T 14-09-2016 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 PANTHER PTHR22773:SF40 1 492 1.1E-215 T 14-09-2016 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 Pfam PF00361 Proton-conducting membrane transporter 133 420 1.1E-90 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 486 1.3E-190 T 14-09-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 9.7E-50 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 9.7E-50 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 9.7E-50 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 9.7E-50 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS08160 33320ae2ef6d880a779469c4831053a3 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 9.7E-50 T 14-09-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 AMK01_RS20710 e1ab7da1fb4d714a54eb76997e086ea2 340 SUPERFAMILY SSF74650 8 337 4.27E-100 T 14-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK01_RS20710 e1ab7da1fb4d714a54eb76997e086ea2 340 PANTHER PTHR10091 7 340 9.4E-122 T 14-09-2016 AMK01_RS20710 e1ab7da1fb4d714a54eb76997e086ea2 340 Gene3D G3DSA:2.70.98.10 4 337 4.6E-110 T 14-09-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 AMK01_RS20710 e1ab7da1fb4d714a54eb76997e086ea2 340 Pfam PF01263 Aldose 1-epimerase 23 335 2.6E-79 T 14-09-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMK01_RS20710 e1ab7da1fb4d714a54eb76997e086ea2 340 PIRSF PIRSF005096 1 340 2.0E-97 T 14-09-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 AMK01_RS18325 05efd329ddd8547eb48d67cc7c2309be 209 Gene3D G3DSA:3.20.10.10 90 201 6.8E-23 T 14-09-2016 AMK01_RS18325 05efd329ddd8547eb48d67cc7c2309be 209 SUPERFAMILY SSF56752 3 203 6.41E-36 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS18325 05efd329ddd8547eb48d67cc7c2309be 209 Pfam PF01063 Amino-transferase class IV 6 203 1.3E-27 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS18325 05efd329ddd8547eb48d67cc7c2309be 209 Gene3D G3DSA:3.30.470.10 3 43 4.2E-6 T 14-09-2016 AMK01_RS20825 18b130ac5f22934b41248de9b14b041a 555 PANTHER PTHR30193:SF3 50 299 2.3E-71 T 14-09-2016 AMK01_RS20825 18b130ac5f22934b41248de9b14b041a 555 Gene3D G3DSA:1.10.3720.10 60 290 2.0E-29 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20825 18b130ac5f22934b41248de9b14b041a 555 Gene3D G3DSA:1.10.3720.10 351 552 1.8E-24 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20825 18b130ac5f22934b41248de9b14b041a 555 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 371 543 5.6E-11 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20825 18b130ac5f22934b41248de9b14b041a 555 SUPERFAMILY SSF161098 50 286 3.46E-35 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20825 18b130ac5f22934b41248de9b14b041a 555 PANTHER PTHR30193 50 299 2.3E-71 T 14-09-2016 AMK01_RS20825 18b130ac5f22934b41248de9b14b041a 555 SUPERFAMILY SSF161098 313 546 1.4E-30 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08645 68e7051844d78b70f299d05a425fe5ff 347 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 116 132 - T 14-09-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 AMK01_RS08645 68e7051844d78b70f299d05a425fe5ff 347 Gene3D G3DSA:3.40.50.1820 61 341 5.5E-65 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS08645 68e7051844d78b70f299d05a425fe5ff 347 PANTHER PTHR23024 114 343 5.7E-60 T 14-09-2016 AMK01_RS08645 68e7051844d78b70f299d05a425fe5ff 347 SUPERFAMILY SSF53474 69 340 2.53E-56 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS08645 68e7051844d78b70f299d05a425fe5ff 347 Pfam PF07859 alpha/beta hydrolase fold 116 317 1.6E-52 T 14-09-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 Pfam PF00034 Cytochrome c 72 173 1.6E-7 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 PANTHER PTHR11961 9 183 3.7E-31 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 Gene3D G3DSA:1.10.760.10 69 175 2.9E-37 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 SUPERFAMILY SSF46626 69 181 1.25E-32 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 PRINTS PR00604 Class IA and IB cytochrome C signature 147 157 2.4E-11 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 PRINTS PR00604 Class IA and IB cytochrome C signature 128 144 2.4E-11 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 PRINTS PR00604 Class IA and IB cytochrome C signature 81 88 2.4E-11 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 PRINTS PR00604 Class IA and IB cytochrome C signature 164 172 2.4E-11 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS00825 0ca4d03797507b616e9b9cf986ace129 188 PRINTS PR00604 Class IA and IB cytochrome C signature 94 109 2.4E-11 T 14-09-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 AMK01_RS20225 ca918ffaef2c890d194c8e328432cd2b 197 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 176 23.882 T 14-09-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMK01_RS20225 ca918ffaef2c890d194c8e328432cd2b 197 PANTHER PTHR35561:SF1 3 178 3.1E-42 T 14-09-2016 AMK01_RS20225 ca918ffaef2c890d194c8e328432cd2b 197 PANTHER PTHR35561 3 178 3.1E-42 T 14-09-2016 AMK01_RS20225 ca918ffaef2c890d194c8e328432cd2b 197 SUPERFAMILY SSF55144 2 176 3.14E-42 T 14-09-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK01_RS20225 ca918ffaef2c890d194c8e328432cd2b 197 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 2 176 2.3E-46 T 14-09-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AMK01_RS20225 ca918ffaef2c890d194c8e328432cd2b 197 Gene3D G3DSA:3.90.1140.10 3 177 4.1E-47 T 14-09-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK01_RS20225 ca918ffaef2c890d194c8e328432cd2b 197 Pfam PF02834 LigT like Phosphoesterase 9 85 1.5E-16 T 14-09-2016 IPR014051 Phosphoesterase, HXTX AMK01_RS20225 ca918ffaef2c890d194c8e328432cd2b 197 Pfam PF02834 LigT like Phosphoesterase 93 168 3.7E-12 T 14-09-2016 IPR014051 Phosphoesterase, HXTX AMK01_RS06650 699abe5ce59348048d450c71da0fae86 294 SUPERFAMILY SSF52141 102 286 2.68E-48 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS06650 699abe5ce59348048d450c71da0fae86 294 PANTHER PTHR33693:SF1 68 294 5.1E-53 T 14-09-2016 AMK01_RS06650 699abe5ce59348048d450c71da0fae86 294 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 117 280 1.2E-46 T 14-09-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain AMK01_RS06650 699abe5ce59348048d450c71da0fae86 294 Gene3D G3DSA:3.40.470.10 105 288 1.0E-53 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS06650 699abe5ce59348048d450c71da0fae86 294 Pfam PF03167 Uracil DNA glycosylase superfamily 132 279 4.3E-38 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS06650 699abe5ce59348048d450c71da0fae86 294 SMART SM00986 130 280 8.6E-29 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS06650 699abe5ce59348048d450c71da0fae86 294 SMART SM00987 130 280 8.6E-29 T 14-09-2016 AMK01_RS06650 699abe5ce59348048d450c71da0fae86 294 PANTHER PTHR33693 68 294 5.1E-53 T 14-09-2016 AMK01_RS01015 a051b164402f42d8ff3c31d963f77278 341 SUPERFAMILY SSF53067 18 326 3.65E-56 T 14-09-2016 AMK01_RS01015 a051b164402f42d8ff3c31d963f77278 341 PANTHER PTHR30514:SF0 15 331 4.5E-71 T 14-09-2016 AMK01_RS01015 a051b164402f42d8ff3c31d963f77278 341 Pfam PF02685 Glucokinase 16 325 4.7E-108 T 14-09-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMK01_RS01015 a051b164402f42d8ff3c31d963f77278 341 Hamap MF_00524 Glucokinase [glk]. 12 327 38.919 T 14-09-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMK01_RS01015 a051b164402f42d8ff3c31d963f77278 341 TIGRFAM TIGR00749 glk: glucokinase 16 319 2.9E-71 T 14-09-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMK01_RS01015 a051b164402f42d8ff3c31d963f77278 341 PANTHER PTHR30514 15 331 4.5E-71 T 14-09-2016 AMK01_RS01015 a051b164402f42d8ff3c31d963f77278 341 Gene3D G3DSA:3.40.367.20 111 310 2.5E-69 T 14-09-2016 AMK01_RS13900 2cd57500ca9acec5704af5ca195a1ae1 316 SUPERFAMILY SSF52540 8 225 4.61E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13900 2cd57500ca9acec5704af5ca195a1ae1 316 PANTHER PTHR24220:SF466 14 251 4.5E-89 T 14-09-2016 AMK01_RS13900 2cd57500ca9acec5704af5ca195a1ae1 316 SMART SM00382 37 205 1.0E-10 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS13900 2cd57500ca9acec5704af5ca195a1ae1 316 Pfam PF00005 ABC transporter 29 156 2.2E-22 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS13900 2cd57500ca9acec5704af5ca195a1ae1 316 PANTHER PTHR24220 14 251 4.5E-89 T 14-09-2016 AMK01_RS13900 2cd57500ca9acec5704af5ca195a1ae1 316 Gene3D G3DSA:3.40.50.300 14 229 1.5E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS13900 2cd57500ca9acec5704af5ca195a1ae1 316 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS17170 6b2475b20a207adad53027bdc63a8416 273 Pfam PF00588 SpoU rRNA Methylase family 125 264 5.9E-26 T 14-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK01_RS17170 6b2475b20a207adad53027bdc63a8416 273 PANTHER PTHR12029:SF52 5 273 6.6E-50 T 14-09-2016 AMK01_RS17170 6b2475b20a207adad53027bdc63a8416 273 PANTHER PTHR12029 5 273 6.6E-50 T 14-09-2016 AMK01_RS17170 6b2475b20a207adad53027bdc63a8416 273 SUPERFAMILY SSF75217 118 267 8.5E-31 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AMK01_RS17170 6b2475b20a207adad53027bdc63a8416 273 SUPERFAMILY SSF55315 6 108 1.62E-13 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AMK01_RS17170 6b2475b20a207adad53027bdc63a8416 273 Gene3D G3DSA:3.30.1330.30 6 108 4.6E-11 T 14-09-2016 IPR029064 50S ribosomal protein L30e-like AMK01_RS17170 6b2475b20a207adad53027bdc63a8416 273 Gene3D G3DSA:3.40.1280.10 122 268 4.8E-37 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK01_RS01520 6f70b77c8054af1ded7f2a3b5992ec1c 165 SUPERFAMILY SSF47240 3 154 2.64E-57 T 14-09-2016 IPR009078 Ferritin-like superfamily AMK01_RS01520 6f70b77c8054af1ded7f2a3b5992ec1c 165 PANTHER PTHR30565 5 162 1.6E-59 T 14-09-2016 AMK01_RS01520 6f70b77c8054af1ded7f2a3b5992ec1c 165 Gene3D G3DSA:1.20.1260.10 2 163 1.1E-70 T 14-09-2016 IPR012347 Ferritin-related AMK01_RS01520 6f70b77c8054af1ded7f2a3b5992ec1c 165 Pfam PF05974 Domain of unknown function (DUF892) 6 162 1.3E-64 T 14-09-2016 IPR010287 Domain of unknown function DUF892 AMK01_RS01245 1318d996305a6cf1270da74df74bb6cc 315 Gene3D G3DSA:1.10.3720.10 89 302 1.3E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01245 1318d996305a6cf1270da74df74bb6cc 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 313 8.5E-36 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01245 1318d996305a6cf1270da74df74bb6cc 315 PANTHER PTHR30465:SF59 1 313 4.1E-111 T 14-09-2016 AMK01_RS01245 1318d996305a6cf1270da74df74bb6cc 315 PANTHER PTHR30465 1 313 4.1E-111 T 14-09-2016 AMK01_RS01245 1318d996305a6cf1270da74df74bb6cc 315 SUPERFAMILY SSF161098 90 295 3.14E-20 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02880 9139d19d621b12fa300c898e6b3fe6b5 310 SMART SM00028 47 80 3.7E-4 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS02880 9139d19d621b12fa300c898e6b3fe6b5 310 Gene3D G3DSA:1.25.40.10 20 94 2.6E-12 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS02880 9139d19d621b12fa300c898e6b3fe6b5 310 SUPERFAMILY SSF53335 108 308 1.13E-21 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02880 9139d19d621b12fa300c898e6b3fe6b5 310 Pfam PF13489 Methyltransferase domain 129 284 1.3E-9 T 14-09-2016 AMK01_RS02880 9139d19d621b12fa300c898e6b3fe6b5 310 Gene3D G3DSA:3.40.50.150 102 286 1.3E-19 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02880 9139d19d621b12fa300c898e6b3fe6b5 310 SUPERFAMILY SSF48452 19 80 1.04E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05210 48161121381e5d3551a0f9eb77729cd9 93 PANTHER PTHR37290 2 89 2.0E-23 T 14-09-2016 AMK01_RS05210 48161121381e5d3551a0f9eb77729cd9 93 PANTHER PTHR37290:SF1 2 89 2.0E-23 T 14-09-2016 AMK01_RS05210 48161121381e5d3551a0f9eb77729cd9 93 Pfam PF05360 yiaA/B two helix domain 12 64 2.9E-17 T 14-09-2016 IPR008024 YiaAB two helix AMK01_RS07935 0d8013e1be7ce1ce2e4bb3d71973807a 396 Gene3D G3DSA:1.20.1250.20 26 185 4.3E-27 T 14-09-2016 AMK01_RS07935 0d8013e1be7ce1ce2e4bb3d71973807a 396 Pfam PF07690 Major Facilitator Superfamily 25 357 6.8E-37 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS07935 0d8013e1be7ce1ce2e4bb3d71973807a 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 15 385 6.1E-89 T 14-09-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AMK01_RS07935 0d8013e1be7ce1ce2e4bb3d71973807a 396 PANTHER PTHR23502:SF19 17 385 1.5E-60 T 14-09-2016 AMK01_RS07935 0d8013e1be7ce1ce2e4bb3d71973807a 396 Gene3D G3DSA:1.20.1250.20 214 386 4.9E-4 T 14-09-2016 AMK01_RS07935 0d8013e1be7ce1ce2e4bb3d71973807a 396 SUPERFAMILY SSF103473 16 388 1.7E-48 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS07935 0d8013e1be7ce1ce2e4bb3d71973807a 396 PANTHER PTHR23502 17 385 1.5E-60 T 14-09-2016 AMK01_RS09270 8b9d4eed36ab3133fe45831ee33beaf9 285 SUPERFAMILY SSF48576 9 283 9.21E-51 T 14-09-2016 IPR008949 Isoprenoid synthase domain AMK01_RS09270 8b9d4eed36ab3133fe45831ee33beaf9 285 PANTHER PTHR21181:SF13 1 284 9.9E-46 T 14-09-2016 AMK01_RS09270 8b9d4eed36ab3133fe45831ee33beaf9 285 Gene3D G3DSA:1.10.600.10 9 229 5.2E-12 T 14-09-2016 IPR008949 Isoprenoid synthase domain AMK01_RS09270 8b9d4eed36ab3133fe45831ee33beaf9 285 Pfam PF00494 Squalene/phytoene synthase 17 271 2.8E-45 T 14-09-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 AMK01_RS09270 8b9d4eed36ab3133fe45831ee33beaf9 285 PANTHER PTHR21181 1 284 9.9E-46 T 14-09-2016 AMK01_RS03130 b13d51eda36cdfd193732ce5b79a7bf5 205 SUPERFAMILY SSF101874 29 199 1.7E-32 T 14-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMK01_RS03130 b13d51eda36cdfd193732ce5b79a7bf5 205 Gene3D G3DSA:2.40.128.110 30 200 4.5E-40 T 14-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMK01_RS03130 b13d51eda36cdfd193732ce5b79a7bf5 205 PANTHER PTHR34406:SF1 3 205 2.3E-24 T 14-09-2016 AMK01_RS03130 b13d51eda36cdfd193732ce5b79a7bf5 205 PANTHER PTHR34406 3 205 2.3E-24 T 14-09-2016 AMK01_RS03130 b13d51eda36cdfd193732ce5b79a7bf5 205 SMART SM00867 30 198 2.6E-43 T 14-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMK01_RS03130 b13d51eda36cdfd193732ce5b79a7bf5 205 Pfam PF04264 YceI-like domain 31 196 2.6E-27 T 14-09-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMK01_RS10825 86aea702a3a22e9c3dc4f15afc8ff4c8 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 202 9.7E-53 T 14-09-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMK01_RS10825 86aea702a3a22e9c3dc4f15afc8ff4c8 215 PANTHER PTHR33508:SF1 1 213 1.2E-67 T 14-09-2016 AMK01_RS10825 86aea702a3a22e9c3dc4f15afc8ff4c8 215 PANTHER PTHR33508 1 213 1.2E-67 T 14-09-2016 AMK01_RS10825 86aea702a3a22e9c3dc4f15afc8ff4c8 215 Pfam PF01914 MarC family integral membrane protein 6 206 2.0E-55 T 14-09-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 PANTHER PTHR11773:SF1 12 954 0.0 T 14-09-2016 AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 12 949 25.619 T 14-09-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 SUPERFAMILY SSF53383 475 880 9.08E-100 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 SUPERFAMILY SSF53383 922 945 9.08E-100 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 Gene3D G3DSA:3.40.640.10 91 307 3.0E-11 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 Gene3D G3DSA:3.40.640.10 500 746 2.4E-42 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 Pfam PF02347 Glycine cleavage system P-protein 607 732 8.5E-9 T 14-09-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 Pfam PF02347 Glycine cleavage system P-protein 20 444 1.0E-180 T 14-09-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 21 943 0.0 T 14-09-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 SUPERFAMILY SSF53383 21 421 5.44E-101 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS11495 980bbf2a3e01cd805523fe905a999798 954 PANTHER PTHR11773 12 954 0.0 T 14-09-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 AMK01_RS15125 90c81b578f1d54f8f6bbffce69e2514c 151 Gene3D G3DSA:1.10.10.410 94 150 4.5E-22 T 14-09-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMK01_RS15125 90c81b578f1d54f8f6bbffce69e2514c 151 SUPERFAMILY SSF89095 2 150 1.62E-39 T 14-09-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AMK01_RS15125 90c81b578f1d54f8f6bbffce69e2514c 151 PANTHER PTHR28055:SF1 1 151 4.4E-45 T 14-09-2016 AMK01_RS15125 90c81b578f1d54f8f6bbffce69e2514c 151 Gene3D G3DSA:1.10.1510.10 1 93 5.9E-30 T 14-09-2016 AMK01_RS15125 90c81b578f1d54f8f6bbffce69e2514c 151 Pfam PF09424 Yqey-like protein 4 149 1.4E-51 T 14-09-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial AMK01_RS15125 90c81b578f1d54f8f6bbffce69e2514c 151 PANTHER PTHR28055 1 151 4.4E-45 T 14-09-2016 AMK01_RS02510 20e2ec130ed17ce48e7f4dabc13d27f2 157 Pfam PF05025 RbsD / FucU transport protein family 4 140 7.6E-33 T 14-09-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 AMK01_RS02510 20e2ec130ed17ce48e7f4dabc13d27f2 157 PANTHER PTHR31690 1 146 1.1E-36 T 14-09-2016 AMK01_RS02510 20e2ec130ed17ce48e7f4dabc13d27f2 157 Gene3D G3DSA:3.40.1650.10 1 142 4.0E-44 T 14-09-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 AMK01_RS02510 20e2ec130ed17ce48e7f4dabc13d27f2 157 SUPERFAMILY SSF102546 1 141 9.42E-38 T 14-09-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 AMK01_RS03770 8e7a36b1608c31be2a1f217f2e3dacd8 429 Pfam PF00463 Isocitrate lyase family 15 243 5.7E-51 T 14-09-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 AMK01_RS03770 8e7a36b1608c31be2a1f217f2e3dacd8 429 ProSitePatterns PS00161 Isocitrate lyase signature. 183 188 - T 14-09-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AMK01_RS03770 8e7a36b1608c31be2a1f217f2e3dacd8 429 SUPERFAMILY SSF51621 10 424 3.23E-147 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS03770 8e7a36b1608c31be2a1f217f2e3dacd8 429 PIRSF PIRSF001362 1 427 5.5E-232 T 14-09-2016 AMK01_RS03770 8e7a36b1608c31be2a1f217f2e3dacd8 429 Gene3D G3DSA:3.20.20.60 13 406 1.8E-154 T 14-09-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK01_RS03770 8e7a36b1608c31be2a1f217f2e3dacd8 429 PANTHER PTHR21631 15 425 3.5E-158 T 14-09-2016 AMK01_RS03770 8e7a36b1608c31be2a1f217f2e3dacd8 429 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 14 243 5.0E-93 T 14-09-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 AMK01_RS21030 957fcb45ddc07f4dd53e28d3f46a1981 232 PANTHER PTHR14969 85 204 1.1E-14 T 14-09-2016 AMK01_RS21030 957fcb45ddc07f4dd53e28d3f46a1981 232 Gene3D G3DSA:1.20.144.10 31 210 3.6E-34 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS21030 957fcb45ddc07f4dd53e28d3f46a1981 232 Pfam PF01569 PAP2 superfamily 89 199 3.6E-22 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS21030 957fcb45ddc07f4dd53e28d3f46a1981 232 SMART SM00014 86 199 2.3E-15 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS21030 957fcb45ddc07f4dd53e28d3f46a1981 232 SUPERFAMILY SSF48317 7 223 1.31E-40 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS14930 344ca4ee1fd669632708780463cf9b3a 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 292 1.2E-9 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14930 344ca4ee1fd669632708780463cf9b3a 303 PANTHER PTHR30193:SF10 1 302 4.0E-77 T 14-09-2016 AMK01_RS14930 344ca4ee1fd669632708780463cf9b3a 303 SUPERFAMILY SSF161098 37 290 2.34E-47 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14930 344ca4ee1fd669632708780463cf9b3a 303 PANTHER PTHR30193 1 302 4.0E-77 T 14-09-2016 AMK01_RS14930 344ca4ee1fd669632708780463cf9b3a 303 Gene3D G3DSA:1.10.3720.10 25 291 9.8E-43 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 SUPERFAMILY SSF47819 187 295 5.05E-26 T 14-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 SMART SM00474 1 168 1.8E-26 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 Pfam PF00570 HRDC domain 209 262 2.9E-11 T 14-09-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 PANTHER PTHR12124 1 257 2.7E-57 T 14-09-2016 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 TIGRFAM TIGR01388 rnd: ribonuclease D 1 364 1.2E-140 T 14-09-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 Pfam PF01612 3'-5' exonuclease 1 168 3.3E-32 T 14-09-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 SUPERFAMILY SSF53098 1 201 2.61E-65 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 Gene3D G3DSA:3.30.420.10 2 179 7.3E-15 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 Hamap MF_01899 Ribonuclease D [rnd]. 1 364 45.295 T 14-09-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMK01_RS07615 8b36973d25ce52d175d36f84cf086762 381 SUPERFAMILY SSF47819 298 367 2.83E-15 T 14-09-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AMK01_RS14925 4dc9f2821d7c3c1f20f842b224d0b589 273 SUPERFAMILY SSF161098 6 259 2.99E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14925 4dc9f2821d7c3c1f20f842b224d0b589 273 PANTHER PTHR32243 1 249 2.2E-48 T 14-09-2016 AMK01_RS14925 4dc9f2821d7c3c1f20f842b224d0b589 273 Gene3D G3DSA:1.10.3720.10 12 267 5.1E-43 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14925 4dc9f2821d7c3c1f20f842b224d0b589 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 269 1.1E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14925 4dc9f2821d7c3c1f20f842b224d0b589 273 PANTHER PTHR32243:SF18 1 249 2.2E-48 T 14-09-2016 AMK01_RS08575 daa92924a352dc361e2b1fa19d38310e 140 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08575 daa92924a352dc361e2b1fa19d38310e 140 Gene3D G3DSA:3.90.1030.10 1 117 1.6E-51 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08575 daa92924a352dc361e2b1fa19d38310e 140 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 3.4E-44 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08575 daa92924a352dc361e2b1fa19d38310e 140 SUPERFAMILY SSF64263 1 119 1.22E-50 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08575 daa92924a352dc361e2b1fa19d38310e 140 Pfam PF01196 Ribosomal protein L17 20 116 1.9E-37 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08575 daa92924a352dc361e2b1fa19d38310e 140 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.642 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08575 daa92924a352dc361e2b1fa19d38310e 140 PANTHER PTHR14413:SF5 1 119 9.6E-70 T 14-09-2016 AMK01_RS08575 daa92924a352dc361e2b1fa19d38310e 140 PANTHER PTHR14413 1 119 9.6E-70 T 14-09-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS17520 9bcb1aedb57ec0f599de5121582ca97e 169 Gene3D G3DSA:3.40.30.10 73 146 1.0E-8 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS17520 9bcb1aedb57ec0f599de5121582ca97e 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 6 150 5.0E-58 T 14-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK01_RS17520 9bcb1aedb57ec0f599de5121582ca97e 169 PIRSF PIRSF000216 1 165 2.3E-59 T 14-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK01_RS17520 9bcb1aedb57ec0f599de5121582ca97e 169 SUPERFAMILY SSF52833 3 151 3.35E-51 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS17520 9bcb1aedb57ec0f599de5121582ca97e 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 108 126 - T 14-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK01_RS17520 9bcb1aedb57ec0f599de5121582ca97e 169 PANTHER PTHR10371 4 152 6.5E-68 T 14-09-2016 AMK01_RS17520 9bcb1aedb57ec0f599de5121582ca97e 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 7 150 6.0E-53 T 14-09-2016 AMK01_RS15045 b49bea63a96c680078ff25609f02088b 191 PIRSF PIRSF010521 1 191 1.8E-66 T 14-09-2016 IPR010321 Protein of unknown function DUF922 AMK01_RS15045 b49bea63a96c680078ff25609f02088b 191 Pfam PF06037 Bacterial protein of unknown function (DUF922) 26 184 8.5E-51 T 14-09-2016 IPR010321 Protein of unknown function DUF922 AMK01_RS04285 6f61071d7ac5ea53d9393eab6418a38e 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 115 1.3E-7 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS04285 6f61071d7ac5ea53d9393eab6418a38e 123 SUPERFAMILY SSF54593 7 119 5.78E-20 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS04285 6f61071d7ac5ea53d9393eab6418a38e 123 Gene3D G3DSA:3.10.180.10 6 118 9.5E-22 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS04285 6f61071d7ac5ea53d9393eab6418a38e 123 PIRSF PIRSF039020 1 122 9.6E-43 T 14-09-2016 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase AMK01_RS18080 bb2dc6e797a0b2e467d0a428b57550a3 307 PIRSF PIRSF016184 1 305 5.9E-77 T 14-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK01_RS18080 bb2dc6e797a0b2e467d0a428b57550a3 307 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 303 9.5E-65 T 14-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK01_RS18080 bb2dc6e797a0b2e467d0a428b57550a3 307 Pfam PF02567 Phenazine biosynthesis-like protein 9 301 1.1E-59 T 14-09-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- AMK01_RS18080 bb2dc6e797a0b2e467d0a428b57550a3 307 Gene3D G3DSA:3.10.310.10 4 131 6.8E-41 T 14-09-2016 AMK01_RS18080 bb2dc6e797a0b2e467d0a428b57550a3 307 PANTHER PTHR13774:SF15 1 307 2.1E-88 T 14-09-2016 AMK01_RS18080 bb2dc6e797a0b2e467d0a428b57550a3 307 PANTHER PTHR13774 1 307 2.1E-88 T 14-09-2016 AMK01_RS18080 bb2dc6e797a0b2e467d0a428b57550a3 307 Gene3D G3DSA:3.10.310.10 135 294 1.3E-33 T 14-09-2016 AMK01_RS18080 bb2dc6e797a0b2e467d0a428b57550a3 307 SUPERFAMILY SSF54506 4 305 2.36E-64 T 14-09-2016 AMK01_RS07475 d3b01c7194994f5332a5d887e0eeb926 283 PANTHER PTHR10587:SF70 78 262 3.3E-51 T 14-09-2016 AMK01_RS07475 d3b01c7194994f5332a5d887e0eeb926 283 PANTHER PTHR10587 78 262 3.3E-51 T 14-09-2016 AMK01_RS07475 d3b01c7194994f5332a5d887e0eeb926 283 SUPERFAMILY SSF88713 77 262 2.15E-48 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS07475 d3b01c7194994f5332a5d887e0eeb926 283 Gene3D G3DSA:3.20.20.370 74 263 6.8E-50 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS07475 d3b01c7194994f5332a5d887e0eeb926 283 Pfam PF01522 Polysaccharide deacetylase 78 190 1.1E-23 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 PANTHER PTHR10996 3 357 3.0E-167 T 14-09-2016 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 315 2.6E-36 T 14-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 283 1.3E-63 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 SUPERFAMILY SSF55021 453 526 7.5E-15 T 14-09-2016 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 Gene3D G3DSA:3.40.50.720 110 285 3.8E-70 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 PANTHER PTHR10996:SF20 3 357 3.0E-167 T 14-09-2016 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 SUPERFAMILY SSF52283 3 129 1.13E-38 T 14-09-2016 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 Gene3D G3DSA:3.30.1330.90 320 447 1.8E-39 T 14-09-2016 IPR029009 Allosteric substrate binding domain AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 Gene3D G3DSA:3.40.50.720 2 109 1.0E-40 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 14-09-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 14-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 SUPERFAMILY SSF51735 100 284 1.63E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 4 527 6.9E-205 T 14-09-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 Gene3D G3DSA:3.30.70.260 448 526 4.2E-16 T 14-09-2016 AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 SUPERFAMILY SSF143548 321 449 1.36E-34 T 14-09-2016 IPR029009 Allosteric substrate binding domain AMK01_RS17830 710f680125df6157395c95865dd39f1e 531 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 14-09-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK01_RS20230 f0fa215fcdebcb208f6470a375c18f19 214 Gene3D G3DSA:3.40.50.1110 29 204 3.3E-49 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS20230 f0fa215fcdebcb208f6470a375c18f19 214 PANTHER PTHR30383 26 207 5.0E-34 T 14-09-2016 AMK01_RS20230 f0fa215fcdebcb208f6470a375c18f19 214 SUPERFAMILY SSF52266 26 201 3.21E-46 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS20230 f0fa215fcdebcb208f6470a375c18f19 214 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 33 190 5.9E-23 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS20235 02ececda14d2af5ef3ea2c4eab6bce48 235 SMART SM00382 34 220 1.0E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20235 02ececda14d2af5ef3ea2c4eab6bce48 235 PANTHER PTHR24220:SF509 7 234 4.9E-92 T 14-09-2016 AMK01_RS20235 02ececda14d2af5ef3ea2c4eab6bce48 235 Pfam PF00005 ABC transporter 25 171 1.7E-33 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20235 02ececda14d2af5ef3ea2c4eab6bce48 235 PANTHER PTHR24220 7 234 4.9E-92 T 14-09-2016 AMK01_RS20235 02ececda14d2af5ef3ea2c4eab6bce48 235 SUPERFAMILY SSF52540 5 224 3.3E-67 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20235 02ececda14d2af5ef3ea2c4eab6bce48 235 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20235 02ececda14d2af5ef3ea2c4eab6bce48 235 Gene3D G3DSA:3.40.50.300 5 224 5.0E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 3.3E-12 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 3.3E-12 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 3.3E-12 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 SMART SM00344 2 111 6.7E-40 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 14-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 2.9E-19 T 14-09-2016 AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 Pfam PF01037 Lrp/AsnC ligand binding domain 69 140 1.2E-15 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 SUPERFAMILY SSF54909 63 150 1.19E-15 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 SUPERFAMILY SSF46785 2 92 7.98E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 PANTHER PTHR30154 1 150 1.5E-45 T 14-09-2016 AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 Gene3D G3DSA:1.10.10.10 2 50 4.4E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 Gene3D G3DSA:3.30.70.920 55 137 1.8E-21 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS14175 7b838b0e979a4aafec514ab6e667a697 154 PANTHER PTHR30154:SF17 1 150 1.5E-45 T 14-09-2016 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 5.9E-40 T 14-09-2016 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.9E-40 T 14-09-2016 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.9E-40 T 14-09-2016 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 5.9E-40 T 14-09-2016 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 5.9E-40 T 14-09-2016 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-09-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PANTHER PTHR22912 4 314 1.4E-154 T 14-09-2016 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 Gene3D G3DSA:3.50.50.60 110 307 4.2E-40 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.1E-75 T 14-09-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 PANTHER PTHR22912:SF48 4 314 1.4E-154 T 14-09-2016 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 Gene3D G3DSA:3.50.50.60 4 109 5.7E-34 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 302 4.5E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 SUPERFAMILY SSF51905 1 313 2.09E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS15215 df729df2526e32b0616954f66ef575a6 324 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 313 4.3E-122 T 14-09-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 SUPERFAMILY SSF52540 274 468 1.48E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 PANTHER PTHR19211 5 534 1.0E-168 T 14-09-2016 AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 Pfam PF16326 ABC transporter C-terminal domain 530 598 5.4E-16 T 14-09-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 Gene3D G3DSA:3.40.50.300 281 518 5.7E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 Pfam PF00005 ABC transporter 24 148 8.9E-23 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 Pfam PF00005 ABC transporter 301 433 1.2E-23 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 SMART SM00382 307 478 3.9E-16 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 SMART SM00382 30 193 3.8E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 PANTHER PTHR19211:SF45 5 534 1.0E-168 T 14-09-2016 AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 Gene3D G3DSA:3.40.50.300 7 195 4.8E-40 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20695 fed27e3a38b4f0547398fc5d8683fa7f 606 SUPERFAMILY SSF52540 3 193 9.94E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01040 b19c12f2883857620d0e8b1381c61097 382 PANTHER PTHR30325 159 382 2.5E-176 T 14-09-2016 AMK01_RS01040 b19c12f2883857620d0e8b1381c61097 382 PANTHER PTHR30325 18 134 2.5E-176 T 14-09-2016 AMK01_RS01040 b19c12f2883857620d0e8b1381c61097 382 Gene3D G3DSA:1.10.3720.10 173 377 3.4E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01040 b19c12f2883857620d0e8b1381c61097 382 SUPERFAMILY SSF161098 176 362 2.88E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01040 b19c12f2883857620d0e8b1381c61097 382 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 198 379 1.0E-27 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14205 be577db95a5ea2fa6288d47e213c6b8f 302 SUPERFAMILY SSF51735 4 257 3.4E-52 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14205 be577db95a5ea2fa6288d47e213c6b8f 302 PANTHER PTHR14194:SF73 1 286 9.3E-74 T 14-09-2016 AMK01_RS14205 be577db95a5ea2fa6288d47e213c6b8f 302 Pfam PF05368 NmrA-like family 5 224 8.9E-26 T 14-09-2016 IPR008030 NmrA-like domain AMK01_RS14205 be577db95a5ea2fa6288d47e213c6b8f 302 Gene3D G3DSA:3.40.50.720 2 224 3.1E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14205 be577db95a5ea2fa6288d47e213c6b8f 302 PANTHER PTHR14194 1 286 9.3E-74 T 14-09-2016 AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PANTHER PTHR24322 27 46 3.6E-50 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PANTHER PTHR24322 172 204 3.6E-50 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PANTHER PTHR24322 63 156 3.6E-50 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 5.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 5.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 5.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 5.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 5.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 5.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PANTHER PTHR24322:SF382 27 46 3.6E-50 T 14-09-2016 AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PANTHER PTHR24322:SF382 172 204 3.6E-50 T 14-09-2016 AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PANTHER PTHR24322:SF382 63 156 3.6E-50 T 14-09-2016 AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 Gene3D G3DSA:3.40.50.720 19 264 4.7E-72 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 264 3.4E-57 T 14-09-2016 AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 23 203 0.0068 T 14-09-2016 AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 3.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 3.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 110 3.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 SUPERFAMILY SSF51735 21 264 3.46E-72 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04365 d2e6da3ed2282adda891b31e630f3122 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS13120 e9a002d39388434ac43c26e31cddbac9 125 Gene3D G3DSA:3.40.50.2300 1 113 1.7E-17 T 14-09-2016 AMK01_RS13120 e9a002d39388434ac43c26e31cddbac9 125 SMART SM00448 1 108 3.4E-16 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS13120 e9a002d39388434ac43c26e31cddbac9 125 PANTHER PTHR26402 1 116 6.5E-14 T 14-09-2016 AMK01_RS13120 e9a002d39388434ac43c26e31cddbac9 125 Pfam PF00072 Response regulator receiver domain 3 108 1.1E-11 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS13120 e9a002d39388434ac43c26e31cddbac9 125 SUPERFAMILY SSF52172 1 117 3.7E-18 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS10535 e037d4e9743a551f4d9c3e0a10cee223 318 Gene3D G3DSA:3.40.190.100 112 244 5.4E-28 T 14-09-2016 AMK01_RS10535 e037d4e9743a551f4d9c3e0a10cee223 318 Gene3D G3DSA:3.40.190.10 248 315 3.4E-17 T 14-09-2016 AMK01_RS10535 e037d4e9743a551f4d9c3e0a10cee223 318 Gene3D G3DSA:3.40.190.10 24 111 3.4E-17 T 14-09-2016 AMK01_RS10535 e037d4e9743a551f4d9c3e0a10cee223 318 SUPERFAMILY SSF53850 24 313 2.71E-49 T 14-09-2016 AMK01_RS10535 e037d4e9743a551f4d9c3e0a10cee223 318 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 304 1.3E-40 T 14-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AMK01_RS09550 58bd06fe77dce3e437161745c60f02f4 161 Pfam PF02643 Uncharacterized ACR, COG1430 50 152 1.9E-32 T 14-09-2016 IPR003795 Protein of unknown function DUF192 AMK01_RS09550 58bd06fe77dce3e437161745c60f02f4 161 PANTHER PTHR37953:SF1 4 161 4.5E-28 T 14-09-2016 AMK01_RS09550 58bd06fe77dce3e437161745c60f02f4 161 PANTHER PTHR37953 4 161 4.5E-28 T 14-09-2016 AMK01_RS10585 7c31c9009e438e1908fe6cb6eeedeb95 247 Gene3D G3DSA:3.40.50.300 1 234 1.3E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10585 7c31c9009e438e1908fe6cb6eeedeb95 247 Pfam PF00005 ABC transporter 22 167 1.1E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10585 7c31c9009e438e1908fe6cb6eeedeb95 247 PANTHER PTHR24220 3 246 2.4E-90 T 14-09-2016 AMK01_RS10585 7c31c9009e438e1908fe6cb6eeedeb95 247 PANTHER PTHR24220:SF81 3 246 2.4E-90 T 14-09-2016 AMK01_RS10585 7c31c9009e438e1908fe6cb6eeedeb95 247 SUPERFAMILY SSF52540 1 233 9.71E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10585 7c31c9009e438e1908fe6cb6eeedeb95 247 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10585 7c31c9009e438e1908fe6cb6eeedeb95 247 SMART SM00382 30 216 4.6E-18 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 Pfam PF00563 EAL domain 500 731 3.4E-60 T 14-09-2016 IPR001633 EAL domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 Pfam PF03924 CHASE domain 107 223 2.7E-19 T 14-09-2016 IPR006189 CHASE domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 482 8.9E-35 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 PANTHER PTHR33121:SF13 449 743 1.8E-50 T 14-09-2016 AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 PANTHER PTHR33121 449 743 1.8E-50 T 14-09-2016 AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 Gene3D G3DSA:3.30.70.270 324 489 4.6E-46 T 14-09-2016 AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 SUPERFAMILY SSF141868 499 741 3.66E-64 T 14-09-2016 IPR001633 EAL domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 SMART SM00267 311 483 8.1E-51 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 SMART SM01079 59 233 1.8E-44 T 14-09-2016 IPR006189 CHASE domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 478 1.6E-37 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 Gene3D G3DSA:3.20.20.450 496 742 1.7E-66 T 14-09-2016 IPR001633 EAL domain AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 SUPERFAMILY SSF55073 327 485 1.49E-39 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS11010 5c61c24008e2051871177488177e97f8 753 SMART SM00052 493 736 2.4E-77 T 14-09-2016 IPR001633 EAL domain AMK01_RS04000 1928f6674e91c4a20bb24f4348d0c019 497 PANTHER PTHR22916 159 323 3.1E-26 T 14-09-2016 AMK01_RS04000 1928f6674e91c4a20bb24f4348d0c019 497 PANTHER PTHR22916 1 142 3.1E-26 T 14-09-2016 AMK01_RS04000 1928f6674e91c4a20bb24f4348d0c019 497 Pfam PF00535 Glycosyl transferase family 2 5 127 1.2E-20 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS04000 1928f6674e91c4a20bb24f4348d0c019 497 SUPERFAMILY SSF53448 1 255 1.69E-37 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS04000 1928f6674e91c4a20bb24f4348d0c019 497 Gene3D G3DSA:2.160.10.10 306 480 1.7E-31 T 14-09-2016 AMK01_RS04000 1928f6674e91c4a20bb24f4348d0c019 497 SUPERFAMILY SSF51161 359 478 3.05E-26 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS04000 1928f6674e91c4a20bb24f4348d0c019 497 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 422 455 4.3E-10 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS04000 1928f6674e91c4a20bb24f4348d0c019 497 Gene3D G3DSA:3.90.550.10 1 221 4.1E-31 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 SUPERFAMILY SSF52540 9 214 3.53E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 PANTHER PTHR13748 237 360 1.7E-141 T 14-09-2016 AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 188 1.2E-59 T 14-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 PANTHER PTHR13748:SF43 1 214 1.7E-141 T 14-09-2016 AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 Gene3D G3DSA:3.30.1220.10 241 360 3.5E-34 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 PANTHER PTHR13748:SF43 237 360 1.7E-141 T 14-09-2016 AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 PANTHER PTHR13748 1 214 1.7E-141 T 14-09-2016 AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 Gene3D G3DSA:3.40.50.300 9 207 1.1E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 276 360 4.3E-23 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 SMART SM00833 268 361 4.8E-16 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS18705 1818399a7720c2165e78eb5d757f0f7f 364 SUPERFAMILY SSF90002 275 360 6.54E-26 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS03470 8213e0fd49e8011bc1f22046ca2656dd 244 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 220 3.4E-57 T 14-09-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AMK01_RS03470 8213e0fd49e8011bc1f22046ca2656dd 244 SUPERFAMILY SSF117143 80 190 1.96E-13 T 14-09-2016 AMK01_RS03470 8213e0fd49e8011bc1f22046ca2656dd 244 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 122 9.4E-38 T 14-09-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AMK01_RS03470 8213e0fd49e8011bc1f22046ca2656dd 244 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-8 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK01_RS03470 8213e0fd49e8011bc1f22046ca2656dd 244 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 177 238 5.4E-12 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK01_RS03470 8213e0fd49e8011bc1f22046ca2656dd 244 PANTHER PTHR30435:SF18 1 240 4.2E-38 T 14-09-2016 AMK01_RS03470 8213e0fd49e8011bc1f22046ca2656dd 244 PANTHER PTHR30435 1 240 4.2E-38 T 14-09-2016 AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 PANTHER PTHR11953:SF0 1 237 2.9E-80 T 14-09-2016 AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 Hamap MF_00564 Ribonuclease PH [rph]. 1 238 48.402 T 14-09-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 SUPERFAMILY SSF55666 156 237 5.37E-22 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-09-2016 IPR018336 Ribonuclease PH, conserved site AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 PANTHER PTHR11953 1 237 2.9E-80 T 14-09-2016 AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 237 6.1E-117 T 14-09-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 SUPERFAMILY SSF54211 1 182 4.86E-46 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 Gene3D G3DSA:3.30.230.70 7 238 2.9E-29 T 14-09-2016 IPR027408 PNPase/RNase PH domain AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 Pfam PF03725 3' exoribonuclease family, domain 2 160 225 5.9E-9 T 14-09-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK01_RS01990 c00805b9d57f03a3b9f0f3c78688f494 239 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-22 T 14-09-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 SUPERFAMILY SSF55785 208 258 1.81E-6 T 14-09-2016 IPR000014 PAS domain AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 PANTHER PTHR33121 493 743 1.1E-65 T 14-09-2016 AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 Gene3D G3DSA:3.20.20.450 506 747 4.6E-86 T 14-09-2016 IPR001633 EAL domain AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 SMART SM00267 322 493 1.3E-32 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 Gene3D G3DSA:3.30.450.20 209 320 4.3E-9 T 14-09-2016 AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 SUPERFAMILY SSF55073 338 491 5.73E-32 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 Pfam PF00563 EAL domain 509 741 1.1E-67 T 14-09-2016 IPR001633 EAL domain AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 485 7.1E-31 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 Pfam PF12860 PAS fold 214 327 1.9E-14 T 14-09-2016 AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 SUPERFAMILY SSF141868 510 750 1.26E-79 T 14-09-2016 IPR001633 EAL domain AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 PANTHER PTHR33121:SF10 493 743 1.1E-65 T 14-09-2016 AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 SMART SM00091 208 275 5.1E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 Gene3D G3DSA:3.30.70.270 335 498 2.5E-36 T 14-09-2016 AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 332 489 3.0E-24 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18660 b4e7f95a0ec5c6f100e695703625b7d9 767 SMART SM00052 503 746 1.3E-92 T 14-09-2016 IPR001633 EAL domain AMK01_RS18155 0de0930d13acec68a7cfc16c2cb7d3f3 158 PANTHER PTHR22617 8 158 4.5E-34 T 14-09-2016 AMK01_RS18155 0de0930d13acec68a7cfc16c2cb7d3f3 158 SUPERFAMILY SSF50341 8 149 9.02E-33 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS18155 0de0930d13acec68a7cfc16c2cb7d3f3 158 Pfam PF01584 CheW-like domain 9 148 5.3E-30 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS18155 0de0930d13acec68a7cfc16c2cb7d3f3 158 SMART SM00260 5 146 7.0E-32 T 14-09-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AMK01_RS06970 5c4ae46544fdfaca693c6889c515fce3 345 SUPERFAMILY SSF51735 2 147 8.6E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06970 5c4ae46544fdfaca693c6889c515fce3 345 PANTHER PTHR22604 1 344 4.9E-127 T 14-09-2016 AMK01_RS06970 5c4ae46544fdfaca693c6889c515fce3 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 121 8.8E-26 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS06970 5c4ae46544fdfaca693c6889c515fce3 345 Gene3D G3DSA:3.30.360.10 138 339 6.9E-33 T 14-09-2016 AMK01_RS06970 5c4ae46544fdfaca693c6889c515fce3 345 PANTHER PTHR22604:SF94 1 344 4.9E-127 T 14-09-2016 AMK01_RS06970 5c4ae46544fdfaca693c6889c515fce3 345 SUPERFAMILY SSF55347 128 272 1.0E-18 T 14-09-2016 AMK01_RS06970 5c4ae46544fdfaca693c6889c515fce3 345 Gene3D G3DSA:3.40.50.720 1 137 1.3E-42 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10160 cd3dffb79a6cfc8edc536d177d3f672a 290 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 286 4.2E-11 T 14-09-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMK01_RS10160 cd3dffb79a6cfc8edc536d177d3f672a 290 Gene3D G3DSA:3.40.50.1370 6 140 8.3E-24 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS10160 cd3dffb79a6cfc8edc536d177d3f672a 290 SUPERFAMILY SSF53671 2 289 3.93E-46 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS10160 cd3dffb79a6cfc8edc536d177d3f672a 290 PANTHER PTHR11405:SF1 7 266 7.2E-27 T 14-09-2016 AMK01_RS10160 cd3dffb79a6cfc8edc536d177d3f672a 290 PANTHER PTHR11405 7 266 7.2E-27 T 14-09-2016 AMK01_RS10160 cd3dffb79a6cfc8edc536d177d3f672a 290 Gene3D G3DSA:3.40.50.1370 141 267 2.2E-15 T 14-09-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK01_RS10160 cd3dffb79a6cfc8edc536d177d3f672a 290 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 142 4.8E-21 T 14-09-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMK01_RS16095 09cd2603b33235b93dac059031ab619e 579 PANTHER PTHR21000:SF14 9 579 8.8E-275 T 14-09-2016 AMK01_RS16095 09cd2603b33235b93dac059031ab619e 579 SUPERFAMILY SSF52016 381 566 1.41E-56 T 14-09-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK01_RS16095 09cd2603b33235b93dac059031ab619e 579 PANTHER PTHR21000 9 579 8.8E-275 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS16095 09cd2603b33235b93dac059031ab619e 579 Pfam PF00920 Dehydratase family 44 561 2.1E-178 T 14-09-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK01_RS16095 09cd2603b33235b93dac059031ab619e 579 SUPERFAMILY SSF143975 6 380 8.63E-126 T 14-09-2016 AMK01_RS14570 4a14b3f75acd4241e9d088f301b4a99e 281 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 11 248 3.8E-83 T 14-09-2016 IPR017689 Outer membrane protein assembly factor BamD AMK01_RS14570 4a14b3f75acd4241e9d088f301b4a99e 281 SUPERFAMILY SSF48452 36 161 9.87E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS14570 4a14b3f75acd4241e9d088f301b4a99e 281 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 5 243 43.989 T 14-09-2016 IPR017689 Outer membrane protein assembly factor BamD AMK01_RS14570 4a14b3f75acd4241e9d088f301b4a99e 281 Gene3D G3DSA:1.25.40.10 40 235 8.7E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS14570 4a14b3f75acd4241e9d088f301b4a99e 281 PANTHER PTHR37423 1 280 5.5E-67 T 14-09-2016 AMK01_RS14570 4a14b3f75acd4241e9d088f301b4a99e 281 Pfam PF13525 Outer membrane lipoprotein 40 235 1.0E-49 T 14-09-2016 AMK01_RS14180 cde44e3d7d4a21d67d9a087089e50e27 239 SUPERFAMILY SSF53681 118 228 6.87E-31 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14180 cde44e3d7d4a21d67d9a087089e50e27 239 PANTHER PTHR21198:SF7 1 236 5.6E-69 T 14-09-2016 AMK01_RS14180 cde44e3d7d4a21d67d9a087089e50e27 239 PANTHER PTHR21198 1 236 5.6E-69 T 14-09-2016 AMK01_RS14180 cde44e3d7d4a21d67d9a087089e50e27 239 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 234 4.8E-71 T 14-09-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AMK01_RS14180 cde44e3d7d4a21d67d9a087089e50e27 239 Gene3D G3DSA:3.40.50.1860 1 112 2.5E-38 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14180 cde44e3d7d4a21d67d9a087089e50e27 239 Gene3D G3DSA:3.40.50.1860 113 215 3.6E-30 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14180 cde44e3d7d4a21d67d9a087089e50e27 239 SUPERFAMILY SSF53681 1 116 9.81E-32 T 14-09-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS14180 cde44e3d7d4a21d67d9a087089e50e27 239 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 7.7E-51 T 14-09-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK01_RS09935 dd4d39893710c64b9e05645a2d3d52cd 214 PANTHER PTHR13887 3 212 1.5E-26 T 14-09-2016 AMK01_RS09935 dd4d39893710c64b9e05645a2d3d52cd 214 Gene3D G3DSA:3.40.30.10 45 210 1.3E-30 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS09935 dd4d39893710c64b9e05645a2d3d52cd 214 SUPERFAMILY SSF52833 45 208 1.01E-32 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS09935 dd4d39893710c64b9e05645a2d3d52cd 214 Pfam PF13462 Thioredoxin 45 209 1.4E-32 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06830 ea441960c4a27404f0eb1a678a22b11c 455 PANTHER PTHR11206 23 446 6.7E-55 T 14-09-2016 AMK01_RS06830 ea441960c4a27404f0eb1a678a22b11c 455 PIRSF PIRSF006603 2 448 1.2E-51 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS06830 ea441960c4a27404f0eb1a678a22b11c 455 Pfam PF01554 MatE 245 409 6.1E-16 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS06830 ea441960c4a27404f0eb1a678a22b11c 455 Pfam PF01554 MatE 31 187 4.7E-16 T 14-09-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK01_RS06830 ea441960c4a27404f0eb1a678a22b11c 455 PANTHER PTHR11206:SF132 23 446 6.7E-55 T 14-09-2016 AMK01_RS00745 01d7d0d5a80ee14355dbdc7003426162 201 Gene3D G3DSA:2.30.30.180 105 171 5.4E-11 T 14-09-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AMK01_RS00745 01d7d0d5a80ee14355dbdc7003426162 201 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 23 174 21.121 T 14-09-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AMK01_RS00745 01d7d0d5a80ee14355dbdc7003426162 201 Pfam PF02576 Putative ribosome maturation factor RimP 28 170 1.3E-43 T 14-09-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AMK01_RS00745 01d7d0d5a80ee14355dbdc7003426162 201 Gene3D G3DSA:3.30.300.70 20 97 2.6E-25 T 14-09-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AMK01_RS00745 01d7d0d5a80ee14355dbdc7003426162 201 SUPERFAMILY SSF74942 101 175 9.94E-15 T 14-09-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AMK01_RS00745 01d7d0d5a80ee14355dbdc7003426162 201 PANTHER PTHR33867 17 182 8.5E-35 T 14-09-2016 AMK01_RS00745 01d7d0d5a80ee14355dbdc7003426162 201 SUPERFAMILY SSF75420 15 100 5.23E-21 T 14-09-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AMK01_RS00745 01d7d0d5a80ee14355dbdc7003426162 201 PANTHER PTHR33867:SF1 17 182 8.5E-35 T 14-09-2016 AMK01_RS21855 93c04b206a6c2ee3137383cab43c27df 147 SUPERFAMILY SSF51735 2 147 2.0E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS21855 93c04b206a6c2ee3137383cab43c27df 147 PANTHER PTHR24322 2 88 4.3E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS21855 93c04b206a6c2ee3137383cab43c27df 147 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 94 4.0E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS21855 93c04b206a6c2ee3137383cab43c27df 147 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 132 4.0E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS21855 93c04b206a6c2ee3137383cab43c27df 147 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 56 75 4.0E-7 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS21855 93c04b206a6c2ee3137383cab43c27df 147 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 2 147 5.1E-53 T 14-09-2016 AMK01_RS21855 93c04b206a6c2ee3137383cab43c27df 147 PANTHER PTHR24322:SF317 2 88 4.3E-28 T 14-09-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK01_RS21855 93c04b206a6c2ee3137383cab43c27df 147 Gene3D G3DSA:3.40.50.720 3 147 1.7E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14125 51a2c1f55a2045e8a263f1c5bc41e4c3 321 PANTHER PTHR32243 30 318 3.3E-72 T 14-09-2016 AMK01_RS14125 51a2c1f55a2045e8a263f1c5bc41e4c3 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 318 1.4E-10 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14125 51a2c1f55a2045e8a263f1c5bc41e4c3 321 Gene3D G3DSA:1.10.3720.10 87 316 3.7E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14125 51a2c1f55a2045e8a263f1c5bc41e4c3 321 SUPERFAMILY SSF161098 81 307 5.49E-46 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14125 51a2c1f55a2045e8a263f1c5bc41e4c3 321 PANTHER PTHR32243:SF13 30 318 3.3E-72 T 14-09-2016 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 PANTHER PTHR13847 24 402 5.3E-47 T 14-09-2016 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 Gene3D G3DSA:3.30.9.10 255 342 1.5E-11 T 14-09-2016 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 Gene3D G3DSA:3.30.9.10 117 174 1.5E-11 T 14-09-2016 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 Pfam PF01266 FAD dependent oxidoreductase 34 383 1.1E-58 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 SUPERFAMILY SSF54373 263 340 5.89E-6 T 14-09-2016 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 Gene3D G3DSA:3.50.50.60 21 111 2.1E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 Gene3D G3DSA:3.50.50.60 345 402 2.1E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 Gene3D G3DSA:3.50.50.60 175 254 2.1E-50 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 SUPERFAMILY SSF51905 32 255 8.05E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 SUPERFAMILY SSF51905 345 405 8.05E-51 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS18590 c0da9a4106197e6fe594ccfa7845cb3e 417 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 409 2.3E-215 T 14-09-2016 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AMK01_RS10955 14015bacecbc318b509702f4d778a012 226 Pfam PF00578 AhpC/TSA family 13 118 1.5E-10 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS10955 14015bacecbc318b509702f4d778a012 226 Gene3D G3DSA:3.40.30.10 11 115 5.3E-20 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS10955 14015bacecbc318b509702f4d778a012 226 Gene3D G3DSA:3.40.30.10 181 201 5.3E-20 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS10955 14015bacecbc318b509702f4d778a012 226 SUPERFAMILY SSF52833 174 207 4.64E-18 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS10955 14015bacecbc318b509702f4d778a012 226 SUPERFAMILY SSF52833 10 116 4.64E-18 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 PRINTS PR00956 Flagellar motor switch protein FliN signature 116 132 1.2E-23 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 PRINTS PR00956 Flagellar motor switch protein FliN signature 133 149 1.2E-23 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 PRINTS PR00956 Flagellar motor switch protein FliN signature 162 177 1.2E-23 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 PRINTS PR00956 Flagellar motor switch protein FliN signature 149 162 1.2E-23 T 14-09-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 PANTHER PTHR41277 108 189 5.7E-14 T 14-09-2016 AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 113 191 2.1E-28 T 14-09-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 SUPERFAMILY SSF101801 113 192 2.62E-18 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 Gene3D G3DSA:2.30.330.10 111 193 7.7E-26 T 14-09-2016 AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 116 189 2.1E-20 T 14-09-2016 IPR001543 Surface presentation of antigen (SpoA) AMK01_RS03455 1067f64390246863539f62cd03ee517c 194 PANTHER PTHR41277:SF1 108 189 5.7E-14 T 14-09-2016 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 SUPERFAMILY SSF56655 10 270 7.46E-57 T 14-09-2016 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 5.7E-17 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 5.7E-17 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 5.7E-17 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 5.7E-17 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 PANTHER PTHR20854:SF4 1 245 6.3E-32 T 14-09-2016 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 Gene3D G3DSA:3.40.190.80 187 268 1.2E-11 T 14-09-2016 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 PANTHER PTHR20854 1 245 6.3E-32 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 Gene3D G3DSA:3.30.540.10 10 167 1.6E-33 T 14-09-2016 AMK01_RS11820 b144b4dcd34691d9424936919a798243 274 Pfam PF00459 Inositol monophosphatase family 13 259 9.0E-37 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS20465 12d5dc43377b884f64052d599a137e6b 525 Pfam PF16347 Domain of unknown function (DUF4976) 398 503 1.6E-9 T 14-09-2016 IPR032506 Domain of unknown function DUF4976 AMK01_RS20465 12d5dc43377b884f64052d599a137e6b 525 Gene3D G3DSA:3.40.720.10 21 412 1.3E-86 T 14-09-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK01_RS20465 12d5dc43377b884f64052d599a137e6b 525 SUPERFAMILY SSF53649 22 503 5.71E-109 T 14-09-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK01_RS20465 12d5dc43377b884f64052d599a137e6b 525 PANTHER PTHR10342 21 243 3.7E-85 T 14-09-2016 AMK01_RS20465 12d5dc43377b884f64052d599a137e6b 525 PANTHER PTHR10342 446 503 3.7E-85 T 14-09-2016 AMK01_RS20465 12d5dc43377b884f64052d599a137e6b 525 PANTHER PTHR10342 284 428 3.7E-85 T 14-09-2016 AMK01_RS20465 12d5dc43377b884f64052d599a137e6b 525 Pfam PF00884 Sulfatase 23 393 2.1E-57 T 14-09-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AMK01_RS20465 12d5dc43377b884f64052d599a137e6b 525 Gene3D G3DSA:3.30.1120.10 448 513 2.0E-8 T 14-09-2016 AMK01_RS05870 92c7e3f8da519482db92d57f940dbe23 403 PANTHER PTHR23535 1 403 9.9E-36 T 14-09-2016 AMK01_RS05870 92c7e3f8da519482db92d57f940dbe23 403 Pfam PF07690 Major Facilitator Superfamily 22 358 5.4E-17 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS05870 92c7e3f8da519482db92d57f940dbe23 403 Gene3D G3DSA:1.20.1250.20 11 194 1.1E-11 T 14-09-2016 AMK01_RS05870 92c7e3f8da519482db92d57f940dbe23 403 Gene3D G3DSA:1.20.1250.20 218 398 1.4E-14 T 14-09-2016 AMK01_RS05870 92c7e3f8da519482db92d57f940dbe23 403 SUPERFAMILY SSF103473 156 393 1.44E-15 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS05870 92c7e3f8da519482db92d57f940dbe23 403 SUPERFAMILY SSF103473 3 194 4.19E-14 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS11460 72322c7951760b018eb92dc9dabf3d64 332 SUPERFAMILY SSF55120 89 322 4.0E-59 T 14-09-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS11460 72322c7951760b018eb92dc9dabf3d64 332 PANTHER PTHR11079:SF74 7 329 2.5E-70 T 14-09-2016 AMK01_RS11460 72322c7951760b018eb92dc9dabf3d64 332 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 14-09-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS11460 72322c7951760b018eb92dc9dabf3d64 332 SUPERFAMILY SSF55174 15 66 1.68E-7 T 14-09-2016 AMK01_RS11460 72322c7951760b018eb92dc9dabf3d64 332 PANTHER PTHR11079 7 329 2.5E-70 T 14-09-2016 AMK01_RS11460 72322c7951760b018eb92dc9dabf3d64 332 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 314 1.8E-60 T 14-09-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS11460 72322c7951760b018eb92dc9dabf3d64 332 Pfam PF00849 RNA pseudouridylate synthase 103 255 2.1E-33 T 14-09-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK01_RS27555 968e9143f33dc4be3645471613807222 294 Pfam PF01571 Aminomethyltransferase folate-binding domain 1 213 9.1E-65 T 14-09-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal AMK01_RS27555 968e9143f33dc4be3645471613807222 294 PANTHER PTHR13847 39 239 3.3E-13 T 14-09-2016 AMK01_RS27555 968e9143f33dc4be3645471613807222 294 Gene3D G3DSA:3.30.70.1400 5 81 6.4E-21 T 14-09-2016 AMK01_RS27555 968e9143f33dc4be3645471613807222 294 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 222 288 7.3E-16 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS27555 968e9143f33dc4be3645471613807222 294 SUPERFAMILY SSF101790 237 288 1.96E-13 T 14-09-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AMK01_RS27555 968e9143f33dc4be3645471613807222 294 Gene3D G3DSA:3.30.1360.120 85 190 2.1E-26 T 14-09-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK01_RS27555 968e9143f33dc4be3645471613807222 294 Gene3D G3DSA:2.40.30.110 234 287 9.7E-19 T 14-09-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS27555 968e9143f33dc4be3645471613807222 294 PIRSF PIRSF006487 1 291 1.2E-45 T 14-09-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMK01_RS27555 968e9143f33dc4be3645471613807222 294 SUPERFAMILY SSF103025 1 236 1.15E-78 T 14-09-2016 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 278 7.8E-62 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 287 409 5.0E-29 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 Gene3D G3DSA:3.65.10.10 26 238 1.7E-60 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 PANTHER PTHR21090:SF5 9 417 1.5E-118 T 14-09-2016 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 14-09-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 14 415 27.151 T 14-09-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 Gene3D G3DSA:3.65.10.10 239 414 5.9E-41 T 14-09-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 PANTHER PTHR21090 9 417 1.5E-118 T 14-09-2016 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 SUPERFAMILY SSF55205 7 414 1.44E-96 T 14-09-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMK01_RS04505 e10156d3878ef71d955efd62d93ca36b 420 PIRSF PIRSF000505 4 417 4.4E-120 T 14-09-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS01360 c2b41f6d77f57e15c91d308f837bf025 362 Pfam PF04443 Acyl-protein synthetase, LuxE 10 357 5.8E-50 T 14-09-2016 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723|UniPathway: UPA00569 AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 SUPERFAMILY SSF46785 18 68 3.58E-8 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 2.1E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 2.1E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 SMART SM00895 154 282 1.7E-9 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 Gene3D G3DSA:1.20.120.530 148 293 1.1E-15 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 Gene3D G3DSA:1.10.10.10 18 70 5.3E-11 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 SUPERFAMILY SSF48008 152 290 2.09E-14 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 Gene3D G3DSA:1.10.10.10 74 142 5.7E-11 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 SUPERFAMILY SSF46785 79 153 1.66E-8 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 61 1.4E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 Pfam PF00392 Bacterial regulatory proteins, gntR family 92 140 6.2E-5 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS02665 b21b08261bc439b5514b13c268810d45 299 Pfam PF07729 FCD domain 154 281 1.5E-13 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 PANTHER PTHR24095:SF117 8 536 4.0E-179 T 14-09-2016 AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 Gene3D G3DSA:3.30.300.30 438 539 2.5E-29 T 14-09-2016 AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 Gene3D G3DSA:3.40.50.980 32 194 2.9E-38 T 14-09-2016 AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 Pfam PF00501 AMP-binding enzyme 33 440 1.7E-81 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 PANTHER PTHR24095 8 536 4.0E-179 T 14-09-2016 AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 14-09-2016 IPR020845 AMP-binding, conserved site AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 Gene3D G3DSA:2.30.38.10 357 431 9.6E-21 T 14-09-2016 AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 Gene3D G3DSA:3.40.50.980 195 350 6.1E-24 T 14-09-2016 AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 528 1.9E-19 T 14-09-2016 IPR025110 AMP-binding enzyme C-terminal domain AMK01_RS19400 9a2e70a2c6feeb7da29529a30dbcf4c9 542 SUPERFAMILY SSF56801 11 539 4.06E-145 T 14-09-2016 AMK01_RS01365 a33a369e01c2537be84b27e53b85eadb 473 Gene3D G3DSA:3.40.50.980 143 302 9.6E-33 T 14-09-2016 AMK01_RS01365 a33a369e01c2537be84b27e53b85eadb 473 PANTHER PTHR24096 114 398 3.7E-51 T 14-09-2016 AMK01_RS01365 a33a369e01c2537be84b27e53b85eadb 473 SUPERFAMILY SSF56801 36 467 2.35E-75 T 14-09-2016 AMK01_RS01365 a33a369e01c2537be84b27e53b85eadb 473 Pfam PF00501 AMP-binding enzyme 42 382 1.2E-49 T 14-09-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK01_RS01365 a33a369e01c2537be84b27e53b85eadb 473 Gene3D G3DSA:2.30.38.10 303 376 2.8E-11 T 14-09-2016 AMK01_RS01365 a33a369e01c2537be84b27e53b85eadb 473 Gene3D G3DSA:3.40.50.980 39 142 2.9E-9 T 14-09-2016 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 SUPERFAMILY SSF53756 19 818 0.0 T 14-09-2016 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 21 818 0.0 T 14-09-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 664 676 - T 14-09-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 PANTHER PTHR11468 16 818 0.0 T 14-09-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 PANTHER PTHR11468:SF3 16 818 0.0 T 14-09-2016 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 Gene3D G3DSA:3.40.50.2000 20 489 5.2E-195 T 14-09-2016 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 Gene3D G3DSA:3.40.50.2000 490 804 7.3E-129 T 14-09-2016 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 Pfam PF00343 Carbohydrate phosphorylase 108 818 0.0 T 14-09-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK01_RS18535 5aee9fdb23bae87bac1b2d1871b9bb26 820 PIRSF PIRSF000460 7 820 7.0E-226 T 14-09-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 Gene3D G3DSA:2.60.40.10 1228 1324 6.7E-30 T 14-09-2016 IPR013783 Immunoglobulin-like fold AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 Gene3D G3DSA:2.60.40.650 849 939 1.5E-11 T 14-09-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 Pfam PF05345 Putative Ig domain 1266 1310 7.2E-10 T 14-09-2016 IPR008009 Putative Ig AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1160 1237 6.1E-14 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 Pfam PF13313 Domain of unknown function (DUF4082) 949 1090 2.3E-55 T 14-09-2016 IPR025141 Domain of unknown function DUF4082 AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 Pfam PF13313 Domain of unknown function (DUF4082) 1330 1476 2.8E-50 T 14-09-2016 IPR025141 Domain of unknown function DUF4082 AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 SMART SM00736 1230 1328 4.5E-36 T 14-09-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 SUPERFAMILY SSF49313 1228 1323 2.98E-24 T 14-09-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 AMK01_RS07005 746fb2621414b8067f771f912f410259 1487 SUPERFAMILY SSF81296 849 941 2.1E-16 T 14-09-2016 IPR014756 Immunoglobulin E-set AMK01_RS21110 ba8ae8d56af6d37559f32e022b96c224 557 Pfam PF07940 Heparinase II/III-like protein 309 551 2.8E-59 T 14-09-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 AMK01_RS12545 0f7b38b7d22542ccbadd1da4eb1f1910 537 Gene3D G3DSA:2.60.120.200 329 536 1.3E-66 T 14-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK01_RS12545 0f7b38b7d22542ccbadd1da4eb1f1910 537 SUPERFAMILY SSF75005 2 308 1.3E-98 T 14-09-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AMK01_RS12545 0f7b38b7d22542ccbadd1da4eb1f1910 537 Gene3D G3DSA:2.115.10.20 2 308 3.9E-98 T 14-09-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AMK01_RS12545 0f7b38b7d22542ccbadd1da4eb1f1910 537 PANTHER PTHR22925:SF44 1 534 4.8E-262 T 14-09-2016 AMK01_RS12545 0f7b38b7d22542ccbadd1da4eb1f1910 537 PANTHER PTHR22925 1 534 4.8E-262 T 14-09-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMK01_RS12545 0f7b38b7d22542ccbadd1da4eb1f1910 537 SUPERFAMILY SSF49899 326 536 3.17E-62 T 14-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK01_RS12545 0f7b38b7d22542ccbadd1da4eb1f1910 537 Pfam PF04616 Glycosyl hydrolases family 43 2 300 1.1E-107 T 14-09-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMK01_RS04460 2f9a30e54c10872549d4cbb96df2c4c1 338 PANTHER PTHR12001 23 338 7.4E-99 T 14-09-2016 IPR017446 Polyprenyl synthetase-related AMK01_RS04460 2f9a30e54c10872549d4cbb96df2c4c1 338 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 95 109 - T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK01_RS04460 2f9a30e54c10872549d4cbb96df2c4c1 338 PANTHER PTHR12001:SF47 23 338 7.4E-99 T 14-09-2016 AMK01_RS04460 2f9a30e54c10872549d4cbb96df2c4c1 338 Pfam PF00348 Polyprenyl synthetase 45 287 4.1E-67 T 14-09-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK01_RS04460 2f9a30e54c10872549d4cbb96df2c4c1 338 Gene3D G3DSA:1.10.600.10 20 336 1.8E-93 T 14-09-2016 IPR008949 Isoprenoid synthase domain AMK01_RS04460 2f9a30e54c10872549d4cbb96df2c4c1 338 SUPERFAMILY SSF48576 14 337 4.16E-93 T 14-09-2016 IPR008949 Isoprenoid synthase domain AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 Pfam PF04055 Radical SAM superfamily 136 314 2.6E-16 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 PANTHER PTHR30544 194 394 8.8E-161 T 14-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 PANTHER PTHR30544 4 177 8.8E-161 T 14-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 23 388 71.109 T 14-09-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 SUPERFAMILY SSF102114 132 368 3.14E-12 T 14-09-2016 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 Gene3D G3DSA:3.20.20.70 132 371 1.2E-14 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 PIRSF PIRSF006004 15 400 1.6E-143 T 14-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 21 392 1.2E-117 T 14-09-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 PANTHER PTHR30544:SF5 194 394 8.8E-161 T 14-09-2016 AMK01_RS20195 adf8186338532c2caf42fe360b8a514a 409 PANTHER PTHR30544:SF5 4 177 8.8E-161 T 14-09-2016 AMK01_RS06405 c2bc036c4a040510a76a698e8cb1af6e 121 Gene3D G3DSA:1.20.1250.20 11 64 4.2E-4 T 14-09-2016 AMK01_RS06405 c2bc036c4a040510a76a698e8cb1af6e 121 Pfam PF03779 SPW repeat 16 59 4.4E-12 T 14-09-2016 IPR005530 SPW repeat AMK01_RS06405 c2bc036c4a040510a76a698e8cb1af6e 121 Pfam PF03779 SPW repeat 66 111 1.1E-16 T 14-09-2016 IPR005530 SPW repeat AMK01_RS12835 3089bd2218913936b1279bbb6c6a65bf 607 SUPERFAMILY SSF48452 362 556 2.16E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12835 3089bd2218913936b1279bbb6c6a65bf 607 Gene3D G3DSA:1.25.40.10 352 555 1.2E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12835 3089bd2218913936b1279bbb6c6a65bf 607 PANTHER PTHR23083 362 555 2.6E-12 T 14-09-2016 AMK01_RS15450 5508cb7e7b87b395821a39f531448236 103 Gene3D G3DSA:3.30.1390.10 5 102 1.2E-32 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK01_RS15450 5508cb7e7b87b395821a39f531448236 103 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 20 98 1.1E-23 T 14-09-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 AMK01_RS15450 5508cb7e7b87b395821a39f531448236 103 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 97 21.085 T 14-09-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMK01_RS15450 5508cb7e7b87b395821a39f531448236 103 SUPERFAMILY SSF54736 17 101 9.42E-24 T 14-09-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK01_RS15450 5508cb7e7b87b395821a39f531448236 103 PANTHER PTHR33473 4 103 2.5E-27 T 14-09-2016 AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PANTHER PTHR24322 147 180 1.4E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PANTHER PTHR24322 7 131 1.4E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 Gene3D G3DSA:3.40.50.720 3 240 1.8E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 SUPERFAMILY SSF51735 3 191 5.45E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.4E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 3.4E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.4E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 7.0E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 7.0E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.0E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 7.0E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.0E-20 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10415 b2efbdd4892b62702e3471561bf60be5 267 Pfam PF00106 short chain dehydrogenase 3 188 3.6E-35 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS17325 f2a6cafd2987b9393c4e5a4d6a32020e 304 PANTHER PTHR32243 1 135 2.0E-97 T 14-09-2016 AMK01_RS17325 f2a6cafd2987b9393c4e5a4d6a32020e 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 299 3.4E-14 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17325 f2a6cafd2987b9393c4e5a4d6a32020e 304 Gene3D G3DSA:1.10.3720.10 4 293 2.2E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17325 f2a6cafd2987b9393c4e5a4d6a32020e 304 PANTHER PTHR32243:SF31 1 135 2.0E-97 T 14-09-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK01_RS17325 f2a6cafd2987b9393c4e5a4d6a32020e 304 SUPERFAMILY SSF161098 4 300 5.49E-49 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17325 f2a6cafd2987b9393c4e5a4d6a32020e 304 PANTHER PTHR32243:SF31 161 302 2.0E-97 T 14-09-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK01_RS17325 f2a6cafd2987b9393c4e5a4d6a32020e 304 PANTHER PTHR32243 161 302 2.0E-97 T 14-09-2016 AMK01_RS01530 6183bbc918879de0e34015c0f0b0d964 147 Gene3D G3DSA:3.40.630.30 4 133 1.5E-35 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS01530 6183bbc918879de0e34015c0f0b0d964 147 SUPERFAMILY SSF55729 4 133 2.03E-31 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS01530 6183bbc918879de0e34015c0f0b0d964 147 PANTHER PTHR10545:SF39 1 145 8.9E-35 T 14-09-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 AMK01_RS01530 6183bbc918879de0e34015c0f0b0d964 147 Pfam PF00583 Acetyltransferase (GNAT) family 55 132 1.5E-18 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS01530 6183bbc918879de0e34015c0f0b0d964 147 PANTHER PTHR10545 1 145 8.9E-35 T 14-09-2016 AMK01_RS12690 8daa2f4cde44b5bac3e152c106b85024 66 Gene3D G3DSA:2.20.25.10 5 38 3.4E-4 T 14-09-2016 AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 SUPERFAMILY SSF52540 300 528 1.05E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 Gene3D G3DSA:3.40.50.300 299 530 7.5E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 Gene3D G3DSA:3.40.50.300 7 261 2.9E-78 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 PANTHER PTHR24220 10 414 2.8E-190 T 14-09-2016 AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 SMART SM00382 314 506 9.1E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 SMART SM00382 37 237 4.0E-17 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 271 4.2E-5 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 508 537 0.0017 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 Pfam PF00005 ABC transporter 306 457 3.3E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 Pfam PF00005 ABC transporter 29 187 1.9E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 SUPERFAMILY SSF52540 8 259 2.0E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01045 8536c07099896115a02c6ec68f74414d 545 PANTHER PTHR24220:SF574 10 414 2.8E-190 T 14-09-2016 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 SUPERFAMILY SSF53067 253 495 2.85E-76 T 14-09-2016 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 PANTHER PTHR10196 1 496 1.1E-267 T 14-09-2016 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 14-09-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 6.4E-54 T 14-09-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 494 9.9E-213 T 14-09-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 PANTHER PTHR10196:SF44 1 496 1.1E-267 T 14-09-2016 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 SUPERFAMILY SSF53067 4 253 1.81E-92 T 14-09-2016 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 Gene3D G3DSA:3.30.420.40 252 494 3.5E-91 T 14-09-2016 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 2.7E-77 T 14-09-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 Hamap MF_00186 Glycerol kinase [glpK]. 2 497 54.503 T 14-09-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 PIRSF PIRSF000538 2 496 1.3E-169 T 14-09-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS15885 792db53af0d9e500ba9ab78fa81e98d0 497 Gene3D G3DSA:3.30.420.40 2 251 3.1E-99 T 14-09-2016 AMK01_RS08255 bc86041f2c46bf18b57818d915085f6a 394 Gene3D G3DSA:1.20.1250.20 18 199 1.3E-22 T 14-09-2016 AMK01_RS08255 bc86041f2c46bf18b57818d915085f6a 394 Gene3D G3DSA:1.20.1250.20 215 384 1.5E-16 T 14-09-2016 AMK01_RS08255 bc86041f2c46bf18b57818d915085f6a 394 PANTHER PTHR23521 14 393 7.6E-56 T 14-09-2016 AMK01_RS08255 bc86041f2c46bf18b57818d915085f6a 394 Pfam PF07690 Major Facilitator Superfamily 30 234 6.9E-16 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS08255 bc86041f2c46bf18b57818d915085f6a 394 SUPERFAMILY SSF103473 16 387 2.75E-46 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS05085 231b4d44607c78e6c1d5cb6d3aa2d955 216 PANTHER PTHR11260 22 202 5.3E-39 T 14-09-2016 AMK01_RS05085 231b4d44607c78e6c1d5cb6d3aa2d955 216 PANTHER PTHR11260:SF285 22 202 5.3E-39 T 14-09-2016 AMK01_RS05085 231b4d44607c78e6c1d5cb6d3aa2d955 216 SUPERFAMILY SSF47616 82 205 5.29E-22 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS05085 231b4d44607c78e6c1d5cb6d3aa2d955 216 Gene3D G3DSA:3.40.30.10 19 93 1.8E-23 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05085 231b4d44607c78e6c1d5cb6d3aa2d955 216 Pfam PF13410 Glutathione S-transferase, C-terminal domain 131 192 3.5E-6 T 14-09-2016 AMK01_RS05085 231b4d44607c78e6c1d5cb6d3aa2d955 216 SUPERFAMILY SSF52833 20 84 5.49E-18 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05085 231b4d44607c78e6c1d5cb6d3aa2d955 216 Gene3D G3DSA:1.20.1050.10 94 205 6.9E-15 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS05085 231b4d44607c78e6c1d5cb6d3aa2d955 216 Pfam PF02798 Glutathione S-transferase, N-terminal domain 16 81 2.5E-13 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 Gene3D G3DSA:1.20.1260.10 2 156 2.8E-58 T 14-09-2016 IPR012347 Ferritin-related AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 Pfam PF00210 Ferritin-like domain 8 144 2.5E-33 T 14-09-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PANTHER PTHR30295:SF9 1 151 4.3E-39 T 14-09-2016 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PRINTS PR00601 Bacterioferritin signature 65 85 9.1E-59 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PRINTS PR00601 Bacterioferritin signature 3 22 9.1E-59 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PRINTS PR00601 Bacterioferritin signature 128 149 9.1E-59 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PRINTS PR00601 Bacterioferritin signature 107 127 9.1E-59 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PRINTS PR00601 Bacterioferritin signature 23 43 9.1E-59 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PRINTS PR00601 Bacterioferritin signature 86 106 9.1E-59 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PRINTS PR00601 Bacterioferritin signature 44 64 9.1E-59 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PANTHER PTHR30295 1 151 4.3E-39 T 14-09-2016 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 PIRSF PIRSF002560 1 157 1.6E-63 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 151 3.7E-55 T 14-09-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AMK01_RS20965 460259ae8a84ebea53eaf0f54935d90d 161 SUPERFAMILY SSF47240 2 155 1.78E-50 T 14-09-2016 IPR009078 Ferritin-like superfamily AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 SUPERFAMILY SSF55073 228 377 4.63E-42 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 PANTHER PTHR10799:SF710 250 375 6.7E-25 T 14-09-2016 AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 PANTHER PTHR10799:SF710 71 219 6.7E-25 T 14-09-2016 AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 PANTHER PTHR10799 250 375 6.7E-25 T 14-09-2016 AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 373 1.7E-36 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 PANTHER PTHR10799 71 219 6.7E-25 T 14-09-2016 AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 Gene3D G3DSA:3.30.70.270 224 380 3.4E-47 T 14-09-2016 AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 SMART SM00267 212 377 6.4E-53 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS18725 813cb97a384e509b3d7e9028cc0bdd23 384 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 220 376 2.6E-39 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 PANTHER PTHR30173:SF6 9 162 4.0E-38 T 14-09-2016 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 161 1.5E-23 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 Gene3D G3DSA:1.10.1740.10 6 80 1.5E-20 T 14-09-2016 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 Pfam PF04542 Sigma-70 region 2 17 79 1.2E-12 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 Pfam PF08281 Sigma-70, region 4 105 157 4.9E-17 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 34 65 - T 14-09-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 SUPERFAMILY SSF88659 102 161 2.4E-16 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 PANTHER PTHR30173 9 162 4.0E-38 T 14-09-2016 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 SUPERFAMILY SSF88946 8 95 2.35E-19 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS16855 ca0edbf13622f76273279923329b810d 185 Gene3D G3DSA:1.10.10.10 103 162 5.4E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17345 5a50a0e33e5c2a1567b11d168cfff20d 412 Pfam PF01547 Bacterial extracellular solute-binding protein 45 331 3.2E-46 T 14-09-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK01_RS17345 5a50a0e33e5c2a1567b11d168cfff20d 412 Gene3D G3DSA:3.40.190.10 143 349 1.7E-53 T 14-09-2016 AMK01_RS17345 5a50a0e33e5c2a1567b11d168cfff20d 412 SUPERFAMILY SSF53850 41 408 1.58E-82 T 14-09-2016 AMK01_RS17345 5a50a0e33e5c2a1567b11d168cfff20d 412 PANTHER PTHR30061 9 408 1.5E-70 T 14-09-2016 AMK01_RS03340 0c4431d02a13a473ad8504ff3c186c16 145 Gene3D G3DSA:3.40.50.2300 7 131 5.2E-11 T 14-09-2016 AMK01_RS03340 0c4431d02a13a473ad8504ff3c186c16 145 Pfam PF00072 Response regulator receiver domain 13 126 1.4E-6 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS03340 0c4431d02a13a473ad8504ff3c186c16 145 SUPERFAMILY SSF52172 9 132 2.78E-12 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS06240 3883df22b8ac377976996fd1b32b9c7e 147 PRINTS PR00608 Class II cytochrome C signature 132 143 3.0E-7 T 14-09-2016 IPR015984 Cytochrome c prime, subgroup AMK01_RS06240 3883df22b8ac377976996fd1b32b9c7e 147 PRINTS PR00608 Class II cytochrome C signature 109 132 3.0E-7 T 14-09-2016 IPR015984 Cytochrome c prime, subgroup AMK01_RS06240 3883df22b8ac377976996fd1b32b9c7e 147 Gene3D G3DSA:1.20.120.10 25 146 4.1E-35 T 14-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMK01_RS06240 3883df22b8ac377976996fd1b32b9c7e 147 SUPERFAMILY SSF47175 27 145 2.65E-31 T 14-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMK01_RS06240 3883df22b8ac377976996fd1b32b9c7e 147 PIRSF PIRSF000027 4 145 9.5E-39 T 14-09-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 AMK01_RS06240 3883df22b8ac377976996fd1b32b9c7e 147 Pfam PF01322 Cytochrome C' 28 143 6.5E-30 T 14-09-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AMK01_RS12090 74b2d43381137c80962d4e84c467f9ba 354 PIRSF PIRSF001361 2 352 2.3E-154 T 14-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS12090 74b2d43381137c80962d4e84c467f9ba 354 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 1.9E-158 T 14-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS12090 74b2d43381137c80962d4e84c467f9ba 354 PANTHER PTHR21225 6 354 1.8E-218 T 14-09-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK01_RS12090 74b2d43381137c80962d4e84c467f9ba 354 Gene3D G3DSA:3.20.20.70 9 351 2.1E-151 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS12090 74b2d43381137c80962d4e84c467f9ba 354 Pfam PF00793 DAHP synthetase I family 41 338 2.7E-100 T 14-09-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK01_RS12090 74b2d43381137c80962d4e84c467f9ba 354 SUPERFAMILY SSF51569 7 348 3.77E-132 T 14-09-2016 AMK01_RS12090 74b2d43381137c80962d4e84c467f9ba 354 PANTHER PTHR21225:SF7 6 354 1.8E-218 T 14-09-2016 AMK01_RS11455 c40b7b6548ebb6e92d19386a2675affe 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 181 2.7E-12 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS11455 c40b7b6548ebb6e92d19386a2675affe 217 Gene3D G3DSA:3.40.50.1000 68 216 1.6E-40 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS11455 c40b7b6548ebb6e92d19386a2675affe 217 SUPERFAMILY SSF56784 2 215 2.27E-50 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS11455 c40b7b6548ebb6e92d19386a2675affe 217 PANTHER PTHR18901 1 213 1.4E-37 T 14-09-2016 AMK01_RS11455 c40b7b6548ebb6e92d19386a2675affe 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 187 7.5E-29 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS16365 9d190b49349c5be7d1760ccfc4f93e91 532 PANTHER PTHR23513 1 428 5.4E-122 T 14-09-2016 AMK01_RS16365 9d190b49349c5be7d1760ccfc4f93e91 532 PANTHER PTHR23513:SF7 1 428 5.4E-122 T 14-09-2016 AMK01_RS16365 9d190b49349c5be7d1760ccfc4f93e91 532 Gene3D G3DSA:1.20.1250.20 17 201 4.9E-20 T 14-09-2016 AMK01_RS16365 9d190b49349c5be7d1760ccfc4f93e91 532 Gene3D G3DSA:1.20.1250.20 228 397 1.7E-14 T 14-09-2016 AMK01_RS16365 9d190b49349c5be7d1760ccfc4f93e91 532 SUPERFAMILY SSF103473 18 401 1.96E-47 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS16365 9d190b49349c5be7d1760ccfc4f93e91 532 Pfam PF05977 Transmembrane secretion effector 9 529 1.9E-222 T 14-09-2016 IPR010290 Transmembrane secretion effector AMK01_RS15075 42d5f01941c5daabe9373293ee07022f 261 PIRSF PIRSF000706 2 261 8.9E-89 T 14-09-2016 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 AMK01_RS15075 42d5f01941c5daabe9373293ee07022f 261 SUPERFAMILY SSF56112 10 261 1.5E-51 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS15075 42d5f01941c5daabe9373293ee07022f 261 Pfam PF01636 Phosphotransferase enzyme family 26 251 5.8E-28 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AMK01_RS15075 42d5f01941c5daabe9373293ee07022f 261 Gene3D G3DSA:3.90.1200.10 93 261 5.5E-43 T 14-09-2016 AMK01_RS15075 42d5f01941c5daabe9373293ee07022f 261 Gene3D G3DSA:3.30.200.20 5 90 3.1E-28 T 14-09-2016 AMK01_RS10580 ad640f2e35408b88bf99546ee2e5179e 281 PANTHER PTHR24220 11 259 9.3E-99 T 14-09-2016 AMK01_RS10580 ad640f2e35408b88bf99546ee2e5179e 281 Pfam PF00005 ABC transporter 28 185 1.9E-21 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10580 ad640f2e35408b88bf99546ee2e5179e 281 SUPERFAMILY SSF52540 8 247 4.99E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10580 ad640f2e35408b88bf99546ee2e5179e 281 PANTHER PTHR24220:SF442 11 259 9.3E-99 T 14-09-2016 AMK01_RS10580 ad640f2e35408b88bf99546ee2e5179e 281 Gene3D G3DSA:3.40.50.300 8 254 9.0E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10580 ad640f2e35408b88bf99546ee2e5179e 281 SMART SM00382 35 242 1.4E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 SUPERFAMILY SSF88659 98 160 3.71E-17 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 Pfam PF04542 Sigma-70 region 2 15 78 9.2E-9 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 159 8.7E-21 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 SUPERFAMILY SSF88946 8 96 5.1E-13 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 Gene3D G3DSA:1.10.1740.10 7 78 1.0E-14 T 14-09-2016 AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 Gene3D G3DSA:1.10.10.10 98 160 2.2E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 Pfam PF08281 Sigma-70, region 4 103 155 1.0E-15 T 14-09-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 PANTHER PTHR30173 7 163 9.3E-31 T 14-09-2016 AMK01_RS14260 169c36746222905c66ee82b6beaeb5ff 171 PANTHER PTHR30173:SF6 7 163 9.3E-31 T 14-09-2016 AMK01_RS02655 9ab26bd279b65d4ee9911458f8f5be35 339 PANTHER PTHR11732:SF241 109 322 5.2E-90 T 14-09-2016 AMK01_RS02655 9ab26bd279b65d4ee9911458f8f5be35 339 PANTHER PTHR11732:SF241 1 92 5.2E-90 T 14-09-2016 AMK01_RS02655 9ab26bd279b65d4ee9911458f8f5be35 339 Pfam PF00248 Aldo/keto reductase family 15 320 6.1E-43 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS02655 9ab26bd279b65d4ee9911458f8f5be35 339 SUPERFAMILY SSF51430 1 323 2.62E-62 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS02655 9ab26bd279b65d4ee9911458f8f5be35 339 PANTHER PTHR11732 109 322 5.2E-90 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS02655 9ab26bd279b65d4ee9911458f8f5be35 339 PANTHER PTHR11732 1 92 5.2E-90 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS02655 9ab26bd279b65d4ee9911458f8f5be35 339 Gene3D G3DSA:3.20.20.100 1 323 9.9E-51 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS01225 2bc9223797c0895423bc0e587f4b406e 116 Pfam PF12802 MarR family 28 86 5.3E-12 T 14-09-2016 AMK01_RS01225 2bc9223797c0895423bc0e587f4b406e 116 SMART SM00347 22 114 0.0043 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS01225 2bc9223797c0895423bc0e587f4b406e 116 Gene3D G3DSA:1.10.10.10 25 112 7.9E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01225 2bc9223797c0895423bc0e587f4b406e 116 SUPERFAMILY SSF46785 24 110 1.15E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09120 2dc8fbd559c9d6e52f7832831e91e755 320 PANTHER PTHR11863:SF2 93 253 2.8E-26 T 14-09-2016 AMK01_RS09120 2dc8fbd559c9d6e52f7832831e91e755 320 PANTHER PTHR11863 93 253 2.8E-26 T 14-09-2016 AMK01_RS09120 2dc8fbd559c9d6e52f7832831e91e755 320 Pfam PF04116 Fatty acid hydroxylase superfamily 118 252 2.0E-31 T 14-09-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 AMK01_RS20810 486840843e6434e12e1a8f13ff17f168 427 Gene3D G3DSA:3.50.50.60 346 391 8.9E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20810 486840843e6434e12e1a8f13ff17f168 427 Gene3D G3DSA:3.50.50.60 173 253 8.9E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20810 486840843e6434e12e1a8f13ff17f168 427 Gene3D G3DSA:3.50.50.60 19 120 8.9E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20810 486840843e6434e12e1a8f13ff17f168 427 PANTHER PTHR13847:SF190 10 386 3.0E-94 T 14-09-2016 AMK01_RS20810 486840843e6434e12e1a8f13ff17f168 427 PANTHER PTHR13847 10 386 3.0E-94 T 14-09-2016 AMK01_RS20810 486840843e6434e12e1a8f13ff17f168 427 Pfam PF01266 FAD dependent oxidoreductase 31 382 6.0E-44 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS20810 486840843e6434e12e1a8f13ff17f168 427 SUPERFAMILY SSF51905 356 402 7.77E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20810 486840843e6434e12e1a8f13ff17f168 427 SUPERFAMILY SSF51905 30 255 7.77E-45 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09000 b885cb770d5e69e2e22e07630488cfba 116 Pfam PF13806 Rieske-like [2Fe-2S] domain 9 106 2.2E-17 T 14-09-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AMK01_RS09000 b885cb770d5e69e2e22e07630488cfba 116 SUPERFAMILY SSF50022 9 109 4.84E-34 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS09000 b885cb770d5e69e2e22e07630488cfba 116 Gene3D G3DSA:2.102.10.10 8 109 1.8E-29 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS09000 b885cb770d5e69e2e22e07630488cfba 116 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 9 107 1.3E-32 T 14-09-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AMK01_RS09000 b885cb770d5e69e2e22e07630488cfba 116 PANTHER PTHR21496 9 108 2.2E-21 T 14-09-2016 AMK01_RS11230 20855c6072dfbf396cf2873452fe117b 152 PANTHER PTHR13947 50 151 2.1E-24 T 14-09-2016 AMK01_RS11230 20855c6072dfbf396cf2873452fe117b 152 Pfam PF13508 Acetyltransferase (GNAT) domain 49 131 2.2E-13 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS11230 20855c6072dfbf396cf2873452fe117b 152 Gene3D G3DSA:3.40.630.30 29 151 2.5E-30 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11230 20855c6072dfbf396cf2873452fe117b 152 SUPERFAMILY SSF55729 30 151 9.96E-27 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 PANTHER PTHR30537 6 296 5.4E-90 T 14-09-2016 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 SUPERFAMILY SSF53850 98 297 9.59E-40 T 14-09-2016 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 PANTHER PTHR30537:SF15 6 296 5.4E-90 T 14-09-2016 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 SUPERFAMILY SSF46785 6 119 3.18E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 Pfam PF03466 LysR substrate binding domain 96 295 8.1E-39 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 71 1.7E-21 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 Gene3D G3DSA:3.40.190.10 173 266 6.5E-35 T 14-09-2016 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 Gene3D G3DSA:3.40.190.10 99 172 4.4E-4 T 14-09-2016 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.5E-10 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.5E-10 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.5E-10 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20800 90d9185c6d220c16f0b7b09f1219837c 302 Gene3D G3DSA:1.10.10.10 10 89 6.0E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04830 5b2fe4da110cd10f5f3449fdc51550e6 471 PANTHER PTHR30624 4 471 2.7E-207 T 14-09-2016 AMK01_RS04830 5b2fe4da110cd10f5f3449fdc51550e6 471 SUPERFAMILY SSF111283 25 469 2.88E-126 T 14-09-2016 AMK01_RS04830 5b2fe4da110cd10f5f3449fdc51550e6 471 Pfam PF01523 Putative modulator of DNA gyrase 31 321 2.1E-55 T 14-09-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS04830 5b2fe4da110cd10f5f3449fdc51550e6 471 PIRSF PIRSF004919 10 470 6.7E-134 T 14-09-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS04830 5b2fe4da110cd10f5f3449fdc51550e6 471 PANTHER PTHR30624:SF4 4 471 2.7E-207 T 14-09-2016 AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 Gene3D G3DSA:3.90.230.10 26 265 1.3E-94 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 Pfam PF00557 Metallopeptidase family M24 27 255 3.6E-51 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 181 199 - T 14-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 206 218 6.2E-22 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 6.2E-22 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 175 187 6.2E-22 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 83 96 6.2E-22 T 14-09-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 SUPERFAMILY SSF55920 24 268 1.31E-87 T 14-09-2016 IPR000994 Peptidase M24, structural domain AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 Hamap MF_01974 Methionine aminopeptidase [map]. 18 264 39.519 T 14-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 PANTHER PTHR10804:SF82 3 265 5.9E-128 T 14-09-2016 AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 18 263 3.1E-91 T 14-09-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK01_RS09350 5e037973ef211ba874f3ed429671ff5e 278 PANTHER PTHR10804 3 265 5.9E-128 T 14-09-2016 AMK01_RS18940 780ad3cb2e54a31d23cca4686b2f376f 324 Gene3D G3DSA:3.60.15.10 40 310 1.8E-46 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS18940 780ad3cb2e54a31d23cca4686b2f376f 324 SUPERFAMILY SSF56281 39 308 6.16E-42 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS18940 780ad3cb2e54a31d23cca4686b2f376f 324 PANTHER PTHR23200:SF42 42 300 8.6E-46 T 14-09-2016 AMK01_RS18940 780ad3cb2e54a31d23cca4686b2f376f 324 Pfam PF00753 Metallo-beta-lactamase superfamily 97 300 2.6E-23 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS18940 780ad3cb2e54a31d23cca4686b2f376f 324 SMART SM00849 95 300 9.9E-21 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS18940 780ad3cb2e54a31d23cca4686b2f376f 324 PANTHER PTHR23200 42 300 8.6E-46 T 14-09-2016 AMK01_RS12670 1c97420e05aec2bedb902c8ab3aa01fe 160 Gene3D G3DSA:3.10.129.10 6 125 1.5E-28 T 14-09-2016 IPR029069 HotDog domain AMK01_RS12670 1c97420e05aec2bedb902c8ab3aa01fe 160 SUPERFAMILY SSF54637 6 125 3.47E-28 T 14-09-2016 IPR029069 HotDog domain AMK01_RS12670 1c97420e05aec2bedb902c8ab3aa01fe 160 PANTHER PTHR30272 6 132 1.7E-21 T 14-09-2016 AMK01_RS12670 1c97420e05aec2bedb902c8ab3aa01fe 160 Pfam PF07977 FabA-like domain 4 122 2.9E-19 T 14-09-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 Pfam PF00480 ROK family 146 356 1.0E-25 T 14-09-2016 IPR000600 ROK family AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 SUPERFAMILY SSF46785 20 79 3.7E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 Pfam PF12802 MarR family 28 75 5.5E-7 T 14-09-2016 AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 Gene3D G3DSA:3.30.420.40 232 344 4.7E-24 T 14-09-2016 AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 SUPERFAMILY SSF53067 90 385 4.49E-38 T 14-09-2016 AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 Gene3D G3DSA:3.30.420.40 86 231 3.1E-30 T 14-09-2016 AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 PANTHER PTHR18964:SF112 67 348 2.1E-37 T 14-09-2016 AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 PANTHER PTHR18964 67 348 2.1E-37 T 14-09-2016 AMK01_RS17340 c773621e2b11f7d4c793b9ff52aa2455 401 Gene3D G3DSA:1.10.10.10 24 84 2.7E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 SMART SM00271 168 233 9.8E-10 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 SUPERFAMILY SSF158682 12 182 4.45E-32 T 14-09-2016 IPR029024 TerB-like AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 Pfam PF05099 Tellurite resistance protein TerB 32 160 1.7E-32 T 14-09-2016 IPR007791 Co-chaperone DjlA, N-terminal AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 Gene3D G3DSA:1.10.287.110 173 233 3.7E-11 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 SUPERFAMILY SSF46565 161 230 8.97E-15 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 PRINTS PR00625 DnaJ domain signature 189 204 7.3E-5 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 PRINTS PR00625 DnaJ domain signature 171 189 7.3E-5 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 PRINTS PR00625 DnaJ domain signature 213 233 7.3E-5 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 Pfam PF00226 DnaJ domain 169 230 5.3E-8 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS14690 fcc3f76214445f815aca59bbb626c31e 235 Gene3D G3DSA:1.10.3680.10 10 172 7.6E-34 T 14-09-2016 IPR029024 TerB-like AMK01_RS12860 0f5611ffdc9514c2b738010171e0fb1a 89 SUPERFAMILY SSF55811 7 74 3.44E-5 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS12860 0f5611ffdc9514c2b738010171e0fb1a 89 Gene3D G3DSA:3.90.79.10 1 63 2.0E-4 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 548 61.575 T 14-09-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 Pfam PF00732 GMC oxidoreductase 4 292 2.9E-99 T 14-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 PANTHER PTHR11552:SF51 4 547 7.0E-225 T 14-09-2016 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 251 265 - T 14-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 PANTHER PTHR11552 4 547 7.0E-225 T 14-09-2016 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 Pfam PF05199 GMC oxidoreductase 384 521 8.0E-41 T 14-09-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 PIRSF PIRSF000137 2 536 5.3E-136 T 14-09-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 80 103 - T 14-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 SUPERFAMILY SSF51905 468 529 2.3E-89 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 SUPERFAMILY SSF51905 1 285 2.3E-89 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 SUPERFAMILY SSF54373 287 469 2.26E-59 T 14-09-2016 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 Gene3D G3DSA:3.50.50.60 2 124 1.3E-115 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 Gene3D G3DSA:3.50.50.60 462 528 1.3E-115 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 Gene3D G3DSA:3.50.50.60 185 310 1.3E-115 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS05825 09cf229ecbb64b87526563d7e41d2b24 549 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 531 2.2E-288 T 14-09-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 SUPERFAMILY SSF52540 7 372 1.87E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 6 362 2.3E-56 T 14-09-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 Pfam PF02463 RecF/RecN/SMC N terminal domain 7 358 1.1E-16 T 14-09-2016 IPR003395 RecF/RecN/SMC, N-terminal AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 SMART SM00382 26 369 1.0E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 ProSitePatterns PS00617 RecF protein signature 1. 125 145 - T 14-09-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 ProSitePatterns PS00618 RecF protein signature 2. 316 334 - T 14-09-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 PANTHER PTHR32182 6 351 2.0E-30 T 14-09-2016 AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 Gene3D G3DSA:3.40.50.300 243 364 5.2E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 Gene3D G3DSA:3.40.50.300 7 175 5.2E-37 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 PANTHER PTHR32182:SF0 6 351 2.0E-30 T 14-09-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMK01_RS00860 f6a51b085c1872b87a07953c5b1de7b1 374 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 374 93.407 T 14-09-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 376 1.1E-123 T 14-09-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 Pfam PF00005 ABC transporter 39 180 6.3E-36 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 SUPERFAMILY SSF50331 255 377 1.29E-16 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 SMART SM00382 47 230 1.5E-17 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 PANTHER PTHR24220 24 337 3.4E-163 T 14-09-2016 AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 SUPERFAMILY SSF52540 23 262 1.69E-89 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 PANTHER PTHR24220:SF481 24 337 3.4E-163 T 14-09-2016 AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 Pfam PF08402 TOBE domain 298 378 7.3E-15 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS03785 a80f385613e0cfadd65240754046c31b 380 Gene3D G3DSA:3.40.50.300 16 257 1.5E-83 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 Gene3D G3DSA:3.40.192.10 11 115 4.0E-32 T 14-09-2016 AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 SUPERFAMILY SSF51735 111 277 5.79E-41 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 14 276 1.4E-64 T 14-09-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 280 31.142 T 14-09-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 PANTHER PTHR21089 16 283 2.2E-82 T 14-09-2016 AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 130 200 3.0E-10 T 14-09-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 Gene3D G3DSA:3.40.50.720 116 277 1.4E-48 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 SUPERFAMILY SSF53223 11 110 6.33E-27 T 14-09-2016 AMK01_RS00020 6f16a0dabb3b0b380984b00d52a689a2 285 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 98 3.2E-25 T 14-09-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK01_RS09365 ab1cd82212aca6bbd67bcbd4e4e72d92 164 PANTHER PTHR33317:SF1 4 161 8.0E-38 T 14-09-2016 AMK01_RS09365 ab1cd82212aca6bbd67bcbd4e4e72d92 164 PANTHER PTHR33317 4 161 8.0E-38 T 14-09-2016 AMK01_RS09365 ab1cd82212aca6bbd67bcbd4e4e72d92 164 SUPERFAMILY SSF53098 18 151 5.92E-37 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS09365 ab1cd82212aca6bbd67bcbd4e4e72d92 164 Pfam PF03652 Holliday junction resolvase 18 149 2.2E-37 T 14-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMK01_RS09365 ab1cd82212aca6bbd67bcbd4e4e72d92 164 SMART SM00732 17 117 1.1E-28 T 14-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMK01_RS09365 ab1cd82212aca6bbd67bcbd4e4e72d92 164 Gene3D G3DSA:3.30.420.140 18 156 2.3E-44 T 14-09-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMK01_RS09365 ab1cd82212aca6bbd67bcbd4e4e72d92 164 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 152 22.504 T 14-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMK01_RS09365 ab1cd82212aca6bbd67bcbd4e4e72d92 164 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 21 149 5.4E-29 T 14-09-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMK01_RS20765 48452ec719badf8efd4ac6995405702e 302 Gene3D G3DSA:3.30.930.10 107 281 1.7E-8 T 14-09-2016 AMK01_RS20765 48452ec719badf8efd4ac6995405702e 302 SUPERFAMILY SSF55681 112 301 2.68E-25 T 14-09-2016 AMK01_RS20765 48452ec719badf8efd4ac6995405702e 302 SUPERFAMILY SSF55681 11 84 2.68E-25 T 14-09-2016 AMK01_RS20245 5c626ac16d7a946a31958c2fa68f0231 242 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 22 238 1.2E-65 T 14-09-2016 AMK01_RS20245 5c626ac16d7a946a31958c2fa68f0231 242 PANTHER PTHR23291 1 242 1.3E-73 T 14-09-2016 IPR006214 Bax inhibitor 1-related AMK01_RS20245 5c626ac16d7a946a31958c2fa68f0231 242 PANTHER PTHR23291:SF42 1 242 1.3E-73 T 14-09-2016 AMK01_RS08590 a1056aab0f8514f0effed239abfaa9b5 315 SUPERFAMILY SSF56524 59 311 1.03E-95 T 14-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK01_RS08590 a1056aab0f8514f0effed239abfaa9b5 315 Gene3D G3DSA:3.90.420.10 57 314 4.3E-73 T 14-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK01_RS08590 a1056aab0f8514f0effed239abfaa9b5 315 Pfam PF00174 Oxidoreductase molybdopterin binding domain 92 248 1.0E-28 T 14-09-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 AMK01_RS08590 a1056aab0f8514f0effed239abfaa9b5 315 PANTHER PTHR19372 12 310 9.5E-147 T 14-09-2016 AMK01_RS08590 a1056aab0f8514f0effed239abfaa9b5 315 PANTHER PTHR19372:SF1 12 310 9.5E-147 T 14-09-2016 AMK01_RS08590 a1056aab0f8514f0effed239abfaa9b5 315 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 5 315 62.583 T 14-09-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AMK01_RS16800 8eff2fcd27685845260fa3e535f40ebd 113 PANTHER PTHR30561:SF1 1 112 2.2E-46 T 14-09-2016 AMK01_RS16800 8eff2fcd27685845260fa3e535f40ebd 113 SUPERFAMILY SSF103481 10 109 5.62E-20 T 14-09-2016 AMK01_RS16800 8eff2fcd27685845260fa3e535f40ebd 113 PANTHER PTHR30561 1 112 2.2E-46 T 14-09-2016 AMK01_RS16800 8eff2fcd27685845260fa3e535f40ebd 113 Pfam PF00893 Small Multidrug Resistance protein 7 97 3.3E-28 T 14-09-2016 IPR000390 Small multidrug resistance protein family GO:0016021 AMK01_RS07705 b7a302da951743416b40235258484ab3 171 PANTHER PTHR13256 5 156 6.6E-34 T 14-09-2016 AMK01_RS07705 b7a302da951743416b40235258484ab3 171 PANTHER PTHR13256:SF10 5 156 6.6E-34 T 14-09-2016 AMK01_RS07705 b7a302da951743416b40235258484ab3 171 Pfam PF13302 Acetyltransferase (GNAT) domain 11 155 4.9E-29 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS07705 b7a302da951743416b40235258484ab3 171 SUPERFAMILY SSF55729 3 156 3.12E-38 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS07705 b7a302da951743416b40235258484ab3 171 Gene3D G3DSA:3.40.630.30 4 160 2.0E-44 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 442 8.7E-98 T 14-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 PANTHER PTHR11136 11 443 1.4E-106 T 14-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 PANTHER PTHR11136:SF0 11 443 1.4E-106 T 14-09-2016 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 PIRSF PIRSF001563 6 447 5.6E-98 T 14-09-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 Gene3D G3DSA:3.90.190.20 300 443 6.1E-22 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 SUPERFAMILY SSF53244 298 443 1.53E-21 T 14-09-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 Pfam PF08245 Mur ligase middle domain 54 276 5.9E-8 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 Gene3D G3DSA:3.40.1190.10 11 299 1.9E-89 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 SUPERFAMILY SSF53623 14 298 3.09E-82 T 14-09-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK01_RS00125 d428fca77d38a56e53c0ac39f4bc3d68 450 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 149 164 - T 14-09-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AMK01_RS03730 1f920b6e7bb6c39bb409a61279fab6a6 431 PANTHER PTHR13847:SF196 1 431 7.4E-79 T 14-09-2016 AMK01_RS03730 1f920b6e7bb6c39bb409a61279fab6a6 431 PANTHER PTHR13847 1 431 7.4E-79 T 14-09-2016 AMK01_RS03730 1f920b6e7bb6c39bb409a61279fab6a6 431 Gene3D G3DSA:3.50.50.60 25 127 1.1E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03730 1f920b6e7bb6c39bb409a61279fab6a6 431 Gene3D G3DSA:3.50.50.60 181 261 1.1E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03730 1f920b6e7bb6c39bb409a61279fab6a6 431 Gene3D G3DSA:3.50.50.60 352 407 1.1E-46 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03730 1f920b6e7bb6c39bb409a61279fab6a6 431 Pfam PF01266 FAD dependent oxidoreductase 38 387 1.2E-49 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS03730 1f920b6e7bb6c39bb409a61279fab6a6 431 SUPERFAMILY SSF51905 36 262 2.24E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03730 1f920b6e7bb6c39bb409a61279fab6a6 431 SUPERFAMILY SSF51905 352 425 2.24E-42 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 Gene3D G3DSA:3.40.50.300 6 254 2.7E-62 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 256 3.9E-6 T 14-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 SUPERFAMILY SSF52540 6 255 2.07E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 Pfam PF00005 ABC transporter 24 185 6.1E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 PANTHER PTHR24220 9 115 1.4E-100 T 14-09-2016 AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 PANTHER PTHR24220 131 256 1.4E-100 T 14-09-2016 AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 SMART SM00382 32 233 0.0092 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 PANTHER PTHR24220:SF358 9 115 1.4E-100 T 14-09-2016 AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 PANTHER PTHR24220:SF358 131 256 1.4E-100 T 14-09-2016 AMK01_RS09960 eaf0913f10365f0be5e28ced3c9fc412 257 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS17800 f803a84b93cf7c5693a8c432d11cde2a 238 SMART SM00382 30 211 2.6E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17800 f803a84b93cf7c5693a8c432d11cde2a 238 PANTHER PTHR24220 7 234 3.3E-82 T 14-09-2016 AMK01_RS17800 f803a84b93cf7c5693a8c432d11cde2a 238 Gene3D G3DSA:3.40.50.300 5 226 1.4E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17800 f803a84b93cf7c5693a8c432d11cde2a 238 SUPERFAMILY SSF52540 6 227 1.25E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17800 f803a84b93cf7c5693a8c432d11cde2a 238 Pfam PF00005 ABC transporter 21 161 6.8E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17800 f803a84b93cf7c5693a8c432d11cde2a 238 PANTHER PTHR24220:SF568 7 234 3.3E-82 T 14-09-2016 AMK01_RS16845 f82f090bea426fad860a70d913fbef38 114 Pfam PF05957 Bacterial protein of unknown function (DUF883) 24 114 2.7E-14 T 14-09-2016 IPR010279 Protein of unknown function DUF883, ElaB AMK01_RS20945 fbe42bc07a160c2c0d049def742bed46 466 Pfam PF01551 Peptidase family M23 349 449 2.6E-18 T 14-09-2016 IPR016047 Peptidase M23 AMK01_RS20945 fbe42bc07a160c2c0d049def742bed46 466 PANTHER PTHR21666 81 457 8.9E-53 T 14-09-2016 AMK01_RS20945 fbe42bc07a160c2c0d049def742bed46 466 Gene3D G3DSA:2.70.70.10 308 455 1.1E-24 T 14-09-2016 AMK01_RS20945 fbe42bc07a160c2c0d049def742bed46 466 SUPERFAMILY SSF51261 309 453 1.88E-19 T 14-09-2016 IPR011055 Duplicated hybrid motif AMK01_RS20945 fbe42bc07a160c2c0d049def742bed46 466 PANTHER PTHR21666:SF204 81 457 8.9E-53 T 14-09-2016 AMK01_RS18645 04d581deedf527273a0457265487b246 382 SMART SM01002 148 314 1.4E-79 T 14-09-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK01_RS18645 04d581deedf527273a0457265487b246 382 Gene3D G3DSA:3.40.50.1770 5 189 3.3E-55 T 14-09-2016 AMK01_RS18645 04d581deedf527273a0457265487b246 382 SMART SM01003 6 139 6.0E-56 T 14-09-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK01_RS18645 04d581deedf527273a0457265487b246 382 SUPERFAMILY SSF52283 5 170 2.04E-46 T 14-09-2016 AMK01_RS18645 04d581deedf527273a0457265487b246 382 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 139 3.3E-39 T 14-09-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMK01_RS18645 04d581deedf527273a0457265487b246 382 PANTHER PTHR10160 7 373 8.6E-154 T 14-09-2016 AMK01_RS18645 04d581deedf527273a0457265487b246 382 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 14-09-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 AMK01_RS18645 04d581deedf527273a0457265487b246 382 Gene3D G3DSA:3.40.50.1770 190 369 3.1E-36 T 14-09-2016 AMK01_RS18645 04d581deedf527273a0457265487b246 382 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 371 1.5E-68 T 14-09-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMK01_RS18645 04d581deedf527273a0457265487b246 382 SUPERFAMILY SSF51735 139 320 2.15E-37 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS11880 a212329b41fd04bdd371be374d964b87 208 SUPERFAMILY SSF47616 73 196 9.47E-18 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS11880 a212329b41fd04bdd371be374d964b87 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 16 81 6.6E-13 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS11880 a212329b41fd04bdd371be374d964b87 208 PANTHER PTHR11260 6 200 2.2E-40 T 14-09-2016 AMK01_RS11880 a212329b41fd04bdd371be374d964b87 208 SUPERFAMILY SSF52833 5 86 8.73E-22 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS11880 a212329b41fd04bdd371be374d964b87 208 Gene3D G3DSA:1.20.1050.10 89 188 3.4E-17 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS11880 a212329b41fd04bdd371be374d964b87 208 PANTHER PTHR11260:SF253 6 200 2.2E-40 T 14-09-2016 AMK01_RS11880 a212329b41fd04bdd371be374d964b87 208 Gene3D G3DSA:3.40.30.10 6 88 3.6E-28 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS10715 07e46ec48b6e2566fb78061e506aa14c 322 PANTHER PTHR32196:SF23 1 320 8.5E-157 T 14-09-2016 AMK01_RS10715 07e46ec48b6e2566fb78061e506aa14c 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 8.3E-41 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS10715 07e46ec48b6e2566fb78061e506aa14c 322 PANTHER PTHR32196 1 320 8.5E-157 T 14-09-2016 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 SUPERFAMILY SSF46785 6 114 3.46E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 Pfam PF03466 LysR substrate binding domain 91 289 1.6E-32 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 Gene3D G3DSA:1.10.10.10 7 87 1.9E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 SUPERFAMILY SSF53850 93 293 2.44E-36 T 14-09-2016 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.1E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.1E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.1E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 PANTHER PTHR30537:SF3 1 307 3.0E-70 T 14-09-2016 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 Gene3D G3DSA:3.40.190.10 95 181 1.2E-18 T 14-09-2016 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 Gene3D G3DSA:3.40.190.10 182 247 4.3E-10 T 14-09-2016 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 PANTHER PTHR30537 1 307 3.0E-70 T 14-09-2016 AMK01_RS15250 bc334e996492070734d6af41cfdb00d8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.8E-18 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS07275 114bef47a92f73b4b058d863e7289709 158 SUPERFAMILY SSF51316 3 128 5.65E-41 T 14-09-2016 IPR011057 Mss4-like AMK01_RS07275 114bef47a92f73b4b058d863e7289709 158 PANTHER PTHR33337:SF4 5 150 4.9E-39 T 14-09-2016 AMK01_RS07275 114bef47a92f73b4b058d863e7289709 158 Gene3D G3DSA:3.90.1590.10 3 154 1.1E-43 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS07275 114bef47a92f73b4b058d863e7289709 158 PANTHER PTHR33337 5 150 4.9E-39 T 14-09-2016 AMK01_RS07275 114bef47a92f73b4b058d863e7289709 158 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 108 3.4E-18 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS14440 58c4236a44b1cbc9b5bd0ffa7d4bb2d8 402 Gene3D G3DSA:2.40.50.100 112 145 3.9E-18 T 14-09-2016 AMK01_RS14440 58c4236a44b1cbc9b5bd0ffa7d4bb2d8 402 Gene3D G3DSA:2.40.50.100 204 235 3.9E-18 T 14-09-2016 AMK01_RS14440 58c4236a44b1cbc9b5bd0ffa7d4bb2d8 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 87 389 1.8E-67 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS14440 58c4236a44b1cbc9b5bd0ffa7d4bb2d8 402 SUPERFAMILY SSF111369 102 312 1.7E-28 T 14-09-2016 AMK01_RS14440 58c4236a44b1cbc9b5bd0ffa7d4bb2d8 402 PANTHER PTHR30469 85 400 3.9E-58 T 14-09-2016 AMK01_RS14440 58c4236a44b1cbc9b5bd0ffa7d4bb2d8 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 308 1.5E-29 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS20720 695df28564fd7e9b464e32ba11e0f6f5 343 Gene3D G3DSA:3.40.50.10490 181 343 1.9E-31 T 14-09-2016 AMK01_RS20720 695df28564fd7e9b464e32ba11e0f6f5 343 PANTHER PTHR10937:SF8 1 342 7.1E-93 T 14-09-2016 AMK01_RS20720 695df28564fd7e9b464e32ba11e0f6f5 343 Gene3D G3DSA:3.40.50.10490 5 171 1.0E-26 T 14-09-2016 AMK01_RS20720 695df28564fd7e9b464e32ba11e0f6f5 343 SUPERFAMILY SSF53697 7 341 1.21E-63 T 14-09-2016 AMK01_RS20720 695df28564fd7e9b464e32ba11e0f6f5 343 Pfam PF01380 SIS domain 48 163 7.8E-16 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS20720 695df28564fd7e9b464e32ba11e0f6f5 343 Pfam PF01380 SIS domain 201 291 3.1E-9 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS20720 695df28564fd7e9b464e32ba11e0f6f5 343 PANTHER PTHR10937 1 342 7.1E-93 T 14-09-2016 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 PANTHER PTHR22572 114 313 5.9E-55 T 14-09-2016 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 34 99 4.1E-14 T 14-09-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 PANTHER PTHR22572:SF117 114 313 5.9E-55 T 14-09-2016 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 240 275 4.4E-9 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 276 309 3.1E-7 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 179 7.5E-11 T 14-09-2016 IPR001451 Hexapeptide repeat AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 17 344 4.6E-117 T 14-09-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 Gene3D G3DSA:2.160.10.10 167 327 2.1E-43 T 14-09-2016 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 Gene3D G3DSA:2.160.10.10 117 166 1.2E-13 T 14-09-2016 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 14 343 34.454 T 14-09-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 137 165 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 285 313 - T 14-09-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK01_RS09735 5491311edbf4398eb872bb4d0183cc57 354 SUPERFAMILY SSF51161 44 333 2.29E-74 T 14-09-2016 IPR011004 Trimeric LpxA-like AMK01_RS20180 2a75fb8f99082101982224ab6c97ec1b 264 SUPERFAMILY SSF52540 2 230 7.27E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20180 2a75fb8f99082101982224ab6c97ec1b 264 Gene3D G3DSA:3.40.50.300 1 230 4.1E-52 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20180 2a75fb8f99082101982224ab6c97ec1b 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20180 2a75fb8f99082101982224ab6c97ec1b 264 SMART SM00382 31 234 6.0E-7 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20180 2a75fb8f99082101982224ab6c97ec1b 264 Pfam PF00005 ABC transporter 22 177 3.7E-25 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20180 2a75fb8f99082101982224ab6c97ec1b 264 PANTHER PTHR24220 3 251 3.1E-108 T 14-09-2016 AMK01_RS20180 2a75fb8f99082101982224ab6c97ec1b 264 PANTHER PTHR24220:SF534 3 251 3.1E-108 T 14-09-2016 AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 Gene3D G3DSA:3.30.70.920 65 138 1.0E-13 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 6.2E-9 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 6.2E-9 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 6.2E-9 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 SMART SM00344 1 107 1.2E-11 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 SUPERFAMILY SSF54909 62 140 1.74E-15 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 Pfam PF13404 AsnC-type helix-turn-helix domain 2 41 3.9E-12 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 Gene3D G3DSA:1.10.10.10 2 53 2.1E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 Pfam PF01037 Lrp/AsnC ligand binding domain 67 137 5.7E-14 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 SUPERFAMILY SSF46785 1 56 6.36E-10 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19795 8263fdb4517c9072b09d70d6f22fe9c0 142 PANTHER PTHR30154 2 139 2.0E-29 T 14-09-2016 AMK01_RS15585 83aea878c7eec291b257928fae5891cb 166 PANTHER PTHR23091 17 130 6.6E-12 T 14-09-2016 AMK01_RS15585 83aea878c7eec291b257928fae5891cb 166 Pfam PF00583 Acetyltransferase (GNAT) family 55 121 2.1E-7 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS15585 83aea878c7eec291b257928fae5891cb 166 PANTHER PTHR23091:SF237 17 130 6.6E-12 T 14-09-2016 AMK01_RS15585 83aea878c7eec291b257928fae5891cb 166 Gene3D G3DSA:3.40.630.30 17 130 1.9E-13 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS15585 83aea878c7eec291b257928fae5891cb 166 SUPERFAMILY SSF55729 13 152 2.44E-18 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19485 c75dccd19ff4b661cae599e90061896c 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 27 186 1.0E-56 T 14-09-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS19485 c75dccd19ff4b661cae599e90061896c 192 SUPERFAMILY SSF89028 6 187 6.87E-63 T 14-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMK01_RS19485 c75dccd19ff4b661cae599e90061896c 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 186 5.0E-60 T 14-09-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK01_RS19485 c75dccd19ff4b661cae599e90061896c 192 Gene3D G3DSA:1.20.1200.10 16 190 1.7E-65 T 14-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMK01_RS19485 c75dccd19ff4b661cae599e90061896c 192 PANTHER PTHR12213 1 187 8.3E-77 T 14-09-2016 AMK01_RS19485 c75dccd19ff4b661cae599e90061896c 192 Pfam PF01923 Cobalamin adenosyltransferase 7 175 6.5E-61 T 14-09-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 PANTHER PTHR32089:SF63 51 242 1.7E-111 T 14-09-2016 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 PANTHER PTHR32089:SF63 351 619 1.7E-111 T 14-09-2016 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 SMART SM00304 316 368 3.2 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 SMART SM00304 207 260 4.2E-6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 Pfam PF00672 HAMP domain 189 249 3.1E-10 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 Gene3D G3DSA:1.10.287.950 385 588 3.6E-54 T 14-09-2016 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 SMART SM00283 369 616 4.4E-98 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 615 5.9E-58 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 SUPERFAMILY SSF158472 209 254 4.84E-10 T 14-09-2016 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 SUPERFAMILY SSF58104 336 617 4.84E-66 T 14-09-2016 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 PANTHER PTHR32089 51 242 1.7E-111 T 14-09-2016 AMK01_RS02380 ce3487579c3d6c60525aa3d7d74b1ff5 666 PANTHER PTHR32089 351 619 1.7E-111 T 14-09-2016 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 8 168 3.6E-64 T 14-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 Gene3D G3DSA:3.30.110.10 79 168 1.7E-39 T 14-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 Gene3D G3DSA:3.10.20.80 2 78 7.5E-33 T 14-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 168 28.107 T 14-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 SUPERFAMILY SSF55200 84 168 5.23E-33 T 14-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 8 76 4.6E-29 T 14-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 83 168 8.6E-39 T 14-09-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 PANTHER PTHR10938 2 168 1.8E-64 T 14-09-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK01_RS01480 7be2ad8f4cf9a2c48d413588e66ee75c 168 SUPERFAMILY SSF54364 4 78 2.88E-27 T 14-09-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK01_RS08770 4e85f60512476836c96995891d609277 193 Pfam PF07886 BA14K-like protein 157 184 9.1E-14 T 14-09-2016 IPR012413 BA14k family GO:0009405 AMK01_RS08770 4e85f60512476836c96995891d609277 193 Pfam PF07886 BA14K-like protein 104 132 1.7E-13 T 14-09-2016 IPR012413 BA14k family GO:0009405 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 15 540 1.1E-216 T 14-09-2016 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 PANTHER PTHR10196 13 541 6.7E-201 T 14-09-2016 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 SUPERFAMILY SSF53067 282 537 8.03E-51 T 14-09-2016 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 283 490 6.2E-48 T 14-09-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 Gene3D G3DSA:3.30.420.40 12 273 1.0E-66 T 14-09-2016 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 PIRSF PIRSF000538 12 542 9.8E-79 T 14-09-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 SUPERFAMILY SSF53067 13 273 4.35E-60 T 14-09-2016 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 14 272 9.3E-25 T 14-09-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 Gene3D G3DSA:3.30.420.40 281 539 1.5E-59 T 14-09-2016 AMK01_RS14105 f9adf08505bcbd9cf17ab07e34aed0d2 543 PANTHER PTHR10196:SF71 13 541 6.7E-201 T 14-09-2016 AMK01_RS10695 2560752d3856a7fd1d1fa5cc25397256 358 Gene3D G3DSA:3.40.50.2300 25 164 1.4E-41 T 14-09-2016 AMK01_RS10695 2560752d3856a7fd1d1fa5cc25397256 358 PANTHER PTHR34296 15 348 1.9E-130 T 14-09-2016 AMK01_RS10695 2560752d3856a7fd1d1fa5cc25397256 358 PANTHER PTHR34296:SF1 15 348 1.9E-130 T 14-09-2016 AMK01_RS10695 2560752d3856a7fd1d1fa5cc25397256 358 Pfam PF02608 Basic membrane protein 27 311 1.4E-51 T 14-09-2016 IPR003760 Basic membrane lipoprotein GO:0005886 AMK01_RS13740 98ce03b14f5c9ae7ce7bd1cee41ed4fd 340 Pfam PF00296 Luciferase-like monooxygenase 8 257 1.0E-24 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS13740 98ce03b14f5c9ae7ce7bd1cee41ed4fd 340 Gene3D G3DSA:3.20.20.30 2 340 2.5E-60 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS13740 98ce03b14f5c9ae7ce7bd1cee41ed4fd 340 PANTHER PTHR30137:SF3 1 340 2.3E-240 T 14-09-2016 AMK01_RS13740 98ce03b14f5c9ae7ce7bd1cee41ed4fd 340 PANTHER PTHR30137 1 340 2.3E-240 T 14-09-2016 AMK01_RS13740 98ce03b14f5c9ae7ce7bd1cee41ed4fd 340 SUPERFAMILY SSF51679 7 333 3.93E-55 T 14-09-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 310 1.7E-111 T 14-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 Hamap MF_00206 Lipoyl synthase [lipA]. 1 315 150.699 T 14-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 PIRSF PIRSF005963 4 322 6.2E-132 T 14-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 SUPERFAMILY SSF102114 42 305 9.16E-62 T 14-09-2016 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 Pfam PF04055 Radical SAM superfamily 83 243 9.4E-11 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 PANTHER PTHR10949 25 323 9.9E-158 T 14-09-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 17 66 7.0E-7 T 14-09-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 SMART SM00729 77 284 3.2E-6 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK01_RS09835 6db2d51cecab434042a894e5198f03b6 323 Gene3D G3DSA:3.20.20.70 45 313 1.7E-68 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS08825 62ba92b75e47d9f2002df3b1d50e6fbd 156 Pfam PF08670 MEKHLA domain 18 154 7.0E-47 T 14-09-2016 IPR013978 MEKHLA AMK01_RS08825 62ba92b75e47d9f2002df3b1d50e6fbd 156 SUPERFAMILY SSF55785 48 149 5.58E-9 T 14-09-2016 IPR000014 PAS domain AMK01_RS08825 62ba92b75e47d9f2002df3b1d50e6fbd 156 Gene3D G3DSA:3.30.450.20 45 142 3.1E-7 T 14-09-2016 AMK01_RS01430 778f8c3ff7fb40d74ffc0487ad51ffe8 172 Gene3D G3DSA:3.40.630.30 3 171 3.4E-41 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS01430 778f8c3ff7fb40d74ffc0487ad51ffe8 172 Pfam PF13673 Acetyltransferase (GNAT) domain 57 148 1.3E-11 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS01430 778f8c3ff7fb40d74ffc0487ad51ffe8 172 PANTHER PTHR23091 1 158 6.8E-18 T 14-09-2016 AMK01_RS01430 778f8c3ff7fb40d74ffc0487ad51ffe8 172 SUPERFAMILY SSF55729 4 171 3.55E-29 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 192 96.055 T 14-09-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 SUPERFAMILY SSF48498 75 187 1.33E-16 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 14-09-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 PANTHER PTHR30055 4 225 8.1E-28 T 14-09-2016 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 Gene3D G3DSA:1.10.357.10 3 192 9.9E-44 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 9.9E-16 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 Pfam PF13977 Bacterial transcriptional repressor 77 186 6.9E-26 T 14-09-2016 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.7E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.7E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 PANTHER PTHR30055:SF61 4 225 8.1E-28 T 14-09-2016 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 SUPERFAMILY SSF46689 4 81 1.95E-18 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS05835 df9d9c24d8ee9415354a99a5f506280d 244 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 1 185 3.1E-70 T 14-09-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 AMK01_RS07205 cf59815a8da7f9b3c94e277bd9054413 232 Pfam PF02666 Phosphatidylserine decarboxylase 46 217 1.5E-29 T 14-09-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMK01_RS07205 cf59815a8da7f9b3c94e277bd9054413 232 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 26 222 3.3E-61 T 14-09-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMK01_RS07205 cf59815a8da7f9b3c94e277bd9054413 232 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 13 221 38.62 T 14-09-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 AMK01_RS07205 cf59815a8da7f9b3c94e277bd9054413 232 PANTHER PTHR35809 2 224 7.9E-75 T 14-09-2016 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 Pfam PF00732 GMC oxidoreductase 3 293 1.2E-86 T 14-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 Gene3D G3DSA:3.50.50.60 3 124 2.9E-109 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 Gene3D G3DSA:3.50.50.60 185 311 2.9E-109 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 Gene3D G3DSA:3.50.50.60 463 526 2.9E-109 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 252 266 - T 14-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 Pfam PF05199 GMC oxidoreductase 384 519 6.0E-39 T 14-09-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 PANTHER PTHR11552 3 543 5.7E-191 T 14-09-2016 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 SUPERFAMILY SSF51905 2 286 3.52E-82 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 SUPERFAMILY SSF51905 469 527 3.52E-82 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 79 102 - T 14-09-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 PIRSF PIRSF000137 1 529 2.6E-141 T 14-09-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 AMK01_RS08705 d05cd5ecf1dcc65018a1fbbd2d480ec5 551 SUPERFAMILY SSF54373 288 470 9.81E-57 T 14-09-2016 AMK01_RS08000 b83529cc068b1910eea61da890504bb3 114 Pfam PF05899 Protein of unknown function (DUF861) 39 110 6.2E-24 T 14-09-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AMK01_RS08000 b83529cc068b1910eea61da890504bb3 114 SUPERFAMILY SSF51182 18 112 7.03E-19 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS08000 b83529cc068b1910eea61da890504bb3 114 Gene3D G3DSA:2.60.120.10 17 113 3.1E-34 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS08000 b83529cc068b1910eea61da890504bb3 114 PANTHER PTHR40943 1 112 1.4E-25 T 14-09-2016 AMK01_RS04080 dd13b7183d875542c4d53d5a4dfc75cf 138 SUPERFAMILY SSF161084 6 129 1.31E-20 T 14-09-2016 AMK01_RS04080 dd13b7183d875542c4d53d5a4dfc75cf 138 Pfam PF01124 MAPEG family 9 132 1.8E-19 T 14-09-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMK01_RS04080 dd13b7183d875542c4d53d5a4dfc75cf 138 Gene3D G3DSA:1.20.120.550 38 133 6.7E-12 T 14-09-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 PANTHER PTHR11019 13 32 4.4E-65 T 14-09-2016 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 PANTHER PTHR11019:SF90 13 32 4.4E-65 T 14-09-2016 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 Gene3D G3DSA:1.10.10.60 222 276 1.3E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 SUPERFAMILY SSF46689 225 274 2.6E-8 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 Gene3D G3DSA:3.40.50.880 12 212 4.5E-36 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 SMART SM00342 240 323 5.9E-27 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 PANTHER PTHR11019:SF90 60 331 4.4E-65 T 14-09-2016 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 Pfam PF01965 DJ-1/PfpI family 20 183 1.4E-13 T 14-09-2016 IPR002818 DJ-1/PfpI AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 PANTHER PTHR11019 60 331 4.4E-65 T 14-09-2016 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 Gene3D G3DSA:1.10.10.60 277 326 3.0E-14 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 SUPERFAMILY SSF46689 276 327 7.17E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 Pfam PF12833 Helix-turn-helix domain 246 323 1.9E-24 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS12875 8560b1fd53e40f70e057c743c2a9fdfc 339 SUPERFAMILY SSF52317 12 205 7.02E-40 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS02890 e6d98d410ce544b2af7dafae87d90d0f 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 35 77 8.6E-14 T 14-09-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS02890 e6d98d410ce544b2af7dafae87d90d0f 153 Gene3D G3DSA:1.20.1290.10 1 144 2.0E-55 T 14-09-2016 IPR029032 AhpD-like AMK01_RS02890 e6d98d410ce544b2af7dafae87d90d0f 153 PANTHER PTHR34846:SF2 40 141 8.5E-12 T 14-09-2016 AMK01_RS02890 e6d98d410ce544b2af7dafae87d90d0f 153 SUPERFAMILY SSF69118 4 144 7.51E-49 T 14-09-2016 IPR029032 AhpD-like AMK01_RS02890 e6d98d410ce544b2af7dafae87d90d0f 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 1.8E-20 T 14-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS02890 e6d98d410ce544b2af7dafae87d90d0f 153 PANTHER PTHR34846 40 141 8.5E-12 T 14-09-2016 AMK01_RS12400 19310f25dfeaf038b090254f64c4ff79 151 Pfam PF08818 Domain of unknown function (DU1801) 39 132 1.1E-19 T 14-09-2016 IPR014922 Domain of unknown function DUF1801 AMK01_RS12400 19310f25dfeaf038b090254f64c4ff79 151 SUPERFAMILY SSF159888 27 137 1.44E-18 T 14-09-2016 AMK01_RS06220 096937a39479efc397e5a0d8907afa15 300 Pfam PF00753 Metallo-beta-lactamase superfamily 50 234 4.7E-5 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS06220 096937a39479efc397e5a0d8907afa15 300 SMART SM00849 46 234 3.5E-13 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS06220 096937a39479efc397e5a0d8907afa15 300 SUPERFAMILY SSF56281 46 263 4.76E-32 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS06220 096937a39479efc397e5a0d8907afa15 300 PANTHER PTHR11935 2 292 6.5E-56 T 14-09-2016 AMK01_RS06220 096937a39479efc397e5a0d8907afa15 300 Gene3D G3DSA:3.60.15.10 50 259 5.1E-30 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS06220 096937a39479efc397e5a0d8907afa15 300 PANTHER PTHR11935:SF5 2 292 6.5E-56 T 14-09-2016 AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 PANTHER PTHR10907:SF47 15 293 1.0E-62 T 14-09-2016 AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 Gene3D G3DSA:2.120.10.30 12 288 1.4E-77 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 19 260 3.0E-66 T 14-09-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 PANTHER PTHR10907 15 293 1.0E-62 T 14-09-2016 AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 242 260 3.4E-28 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 136 158 3.4E-28 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 200 217 3.4E-28 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 20 37 3.4E-28 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 159 179 3.4E-28 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 96 117 3.4E-28 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS04350 d77476b5cfd602e936e3177d0b24728b 295 SUPERFAMILY SSF63829 15 289 1.96E-56 T 14-09-2016 AMK01_RS13675 dd763627abe9ac3a8e15329dd9f3084a 128 Pfam PF07883 Cupin domain 46 110 6.7E-19 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS13675 dd763627abe9ac3a8e15329dd9f3084a 128 SUPERFAMILY SSF51182 39 114 1.11E-22 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS13675 dd763627abe9ac3a8e15329dd9f3084a 128 Gene3D G3DSA:2.60.120.10 25 118 3.3E-23 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 PANTHER PTHR10314 364 469 8.4E-156 T 14-09-2016 AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 102 403 3.6E-19 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 Gene3D G3DSA:3.40.50.1100 114 204 2.6E-10 T 14-09-2016 AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 PANTHER PTHR10314 56 332 8.4E-156 T 14-09-2016 AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 TIGRFAM TIGR00260 thrC: threonine synthase 72 427 6.2E-87 T 14-09-2016 IPR004450 Threonine synthase-like AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 PANTHER PTHR10314:SF1 364 469 8.4E-156 T 14-09-2016 AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 PANTHER PTHR10314:SF1 28 39 8.4E-156 T 14-09-2016 AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 SUPERFAMILY SSF53686 4 462 3.46E-167 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 PANTHER PTHR10314:SF1 56 332 8.4E-156 T 14-09-2016 AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 Gene3D G3DSA:3.90.1380.10 4 88 2.1E-31 T 14-09-2016 IPR029144 Threonine synthase, N-terminal AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 PANTHER PTHR10314 28 39 8.4E-156 T 14-09-2016 AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 Pfam PF14821 Threonine synthase N terminus 6 83 8.7E-29 T 14-09-2016 IPR029144 Threonine synthase, N-terminal AMK01_RS04980 7d493563c683e531c3538c9f31b18965 474 Gene3D G3DSA:3.40.50.1100 205 437 3.1E-100 T 14-09-2016 AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 Gene3D G3DSA:1.10.1270.20 161 230 1.8E-29 T 14-09-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 PANTHER PTHR32125 7 228 2.9E-93 T 14-09-2016 AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 SUPERFAMILY SSF75217 2 229 3.73E-92 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 Gene3D G3DSA:3.40.1280.10 3 160 1.1E-62 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 PANTHER PTHR32125:SF1 7 228 2.9E-93 T 14-09-2016 AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 221 3.3E-54 T 14-09-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 PIRSF PIRSF000386 3 233 1.2E-92 T 14-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 229 1.9E-78 T 14-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK01_RS20345 20348eeea3fb20d63d874e95b6f12201 233 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 233 103.959 T 14-09-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMK01_RS00935 b15082cf6cb963d551bcd3e806cf5248 231 TIGRFAM TIGR03223 Phn_opern_protn: putative phosphonate metabolism protein 2 227 3.8E-84 T 14-09-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS00935 b15082cf6cb963d551bcd3e806cf5248 231 PIRSF PIRSF033328 1 231 2.9E-89 T 14-09-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS00935 b15082cf6cb963d551bcd3e806cf5248 231 Pfam PF06299 Protein of unknown function (DUF1045) 61 219 1.8E-60 T 14-09-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 AMK01_RS09540 babbeeaaaec92babc133a424744cbf5b 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 1.1E-14 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS09540 babbeeaaaec92babc133a424744cbf5b 146 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-09-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK01_RS09540 babbeeaaaec92babc133a424744cbf5b 146 PANTHER PTHR10374:SF8 1 140 3.2E-42 T 14-09-2016 AMK01_RS09540 babbeeaaaec92babc133a424744cbf5b 146 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 129 2.0E-36 T 14-09-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 AMK01_RS09540 babbeeaaaec92babc133a424744cbf5b 146 PANTHER PTHR10374 1 140 3.2E-42 T 14-09-2016 AMK01_RS09540 babbeeaaaec92babc133a424744cbf5b 146 SUPERFAMILY SSF54593 1 131 9.93E-33 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS09540 babbeeaaaec92babc133a424744cbf5b 146 Gene3D G3DSA:3.10.180.10 2 128 7.2E-40 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS20815 6ecf2e72c672816c2520116e068a8e63 512 Gene3D G3DSA:3.40.309.10 280 457 4.8E-50 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS20815 6ecf2e72c672816c2520116e068a8e63 512 PANTHER PTHR11699:SF144 5 510 7.0E-259 T 14-09-2016 AMK01_RS20815 6ecf2e72c672816c2520116e068a8e63 512 Gene3D G3DSA:3.40.605.10 27 279 2.6E-70 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS20815 6ecf2e72c672816c2520116e068a8e63 512 Pfam PF00171 Aldehyde dehydrogenase family 29 490 1.6E-123 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS20815 6ecf2e72c672816c2520116e068a8e63 512 PANTHER PTHR11699 5 510 7.0E-259 T 14-09-2016 AMK01_RS20815 6ecf2e72c672816c2520116e068a8e63 512 SUPERFAMILY SSF53720 26 499 1.83E-127 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS20815 6ecf2e72c672816c2520116e068a8e63 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 14-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 240 4.2E-114 T 14-09-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.3E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.3E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.3E-14 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 178 5.2E-5 T 14-09-2016 AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 Gene3D G3DSA:3.40.50.720 3 239 3.6E-79 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 5.4E-60 T 14-09-2016 AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 3.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.1E-47 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PANTHER PTHR24322 147 179 1.2E-68 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PANTHER PTHR24322 7 131 1.2E-68 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 SUPERFAMILY SSF51735 3 239 5.72E-77 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PANTHER PTHR24322:SF559 147 179 1.2E-68 T 14-09-2016 AMK01_RS20635 fd2ed6b2a60693392ca082273984e826 241 PANTHER PTHR24322:SF559 7 131 1.2E-68 T 14-09-2016 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 78 3.1E-16 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 Gene3D G3DSA:1.10.10.10 9 82 2.2E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 PANTHER PTHR11751 129 152 2.0E-16 T 14-09-2016 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 Gene3D G3DSA:3.40.1410.10 87 244 3.2E-37 T 14-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 SUPERFAMILY SSF46785 9 84 9.91E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 SMART SM00345 19 78 3.6E-13 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 SMART SM00866 100 240 9.0E-26 T 14-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 PANTHER PTHR11751:SF292 15 81 2.0E-16 T 14-09-2016 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 Pfam PF07702 UTRA domain 103 239 1.2E-26 T 14-09-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 PANTHER PTHR11751:SF292 129 152 2.0E-16 T 14-09-2016 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 4.9E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 4.9E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 SUPERFAMILY SSF64288 66 244 1.3E-34 T 14-09-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 8 245 4.0E-95 T 14-09-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF AMK01_RS00995 8fd1740fad0058fc726c388d7de63300 245 PANTHER PTHR11751 15 81 2.0E-16 T 14-09-2016 AMK01_RS02035 6159e72c0c5f5c9b8f27dfab59adaabc 233 SUPERFAMILY SSF53335 63 231 2.63E-28 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02035 6159e72c0c5f5c9b8f27dfab59adaabc 233 PANTHER PTHR23417 23 232 9.5E-43 T 14-09-2016 AMK01_RS02035 6159e72c0c5f5c9b8f27dfab59adaabc 233 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 16 233 27.121 T 14-09-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK01_RS02035 6159e72c0c5f5c9b8f27dfab59adaabc 233 Pfam PF02390 Putative methyltransferase 61 224 2.0E-38 T 14-09-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK01_RS02035 6159e72c0c5f5c9b8f27dfab59adaabc 233 Gene3D G3DSA:3.40.50.150 63 197 4.6E-11 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS02035 6159e72c0c5f5c9b8f27dfab59adaabc 233 PANTHER PTHR23417:SF14 23 232 9.5E-43 T 14-09-2016 AMK01_RS10155 1d4c016930e88378aade04d06d0b509d 245 Pfam PF00565 Staphylococcal nuclease homologue 143 226 5.2E-5 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS10155 1d4c016930e88378aade04d06d0b509d 245 SUPERFAMILY SSF50199 127 231 6.93E-12 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS10155 1d4c016930e88378aade04d06d0b509d 245 Gene3D G3DSA:2.40.50.90 127 225 4.7E-14 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS02235 05c20fa7ec7bb11e4465e291999480fc 154 PANTHER PTHR30505:SF6 1 154 7.7E-55 T 14-09-2016 AMK01_RS02235 05c20fa7ec7bb11e4465e291999480fc 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 1.6E-34 T 14-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK01_RS02235 05c20fa7ec7bb11e4465e291999480fc 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 147 1.4E-51 T 14-09-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK01_RS02235 05c20fa7ec7bb11e4465e291999480fc 154 Gene3D G3DSA:3.40.930.10 1 149 3.9E-47 T 14-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK01_RS02235 05c20fa7ec7bb11e4465e291999480fc 154 PANTHER PTHR30505 1 154 7.7E-55 T 14-09-2016 AMK01_RS02235 05c20fa7ec7bb11e4465e291999480fc 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-09-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK01_RS02235 05c20fa7ec7bb11e4465e291999480fc 154 SUPERFAMILY SSF55804 1 147 4.45E-43 T 14-09-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK01_RS01135 f4a32370a628259f86ce513fc3bb923a 209 PANTHER PTHR10285 6 198 5.6E-92 T 14-09-2016 AMK01_RS01135 f4a32370a628259f86ce513fc3bb923a 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 45.181 T 14-09-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 AMK01_RS01135 f4a32370a628259f86ce513fc3bb923a 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 7.4E-71 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS01135 f4a32370a628259f86ce513fc3bb923a 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 4.2E-82 T 14-09-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 AMK01_RS01135 f4a32370a628259f86ce513fc3bb923a 209 Gene3D G3DSA:3.40.50.2020 4 209 7.4E-80 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS01135 f4a32370a628259f86ce513fc3bb923a 209 SUPERFAMILY SSF53271 4 207 2.36E-67 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS10435 6031cf45009596cfbbf40a6deb2ea3db 129 Gene3D G3DSA:3.30.1330.40 1 127 1.1E-32 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS10435 6031cf45009596cfbbf40a6deb2ea3db 129 PANTHER PTHR11803 1 126 6.5E-26 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS10435 6031cf45009596cfbbf40a6deb2ea3db 129 SUPERFAMILY SSF55298 1 126 3.77E-26 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS10435 6031cf45009596cfbbf40a6deb2ea3db 129 Pfam PF01042 Endoribonuclease L-PSP 13 126 5.7E-20 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS15875 73f043396ccc5152812d3667de3ef1d2 124 Gene3D G3DSA:3.30.70.1060 1 117 6.8E-32 T 14-09-2016 AMK01_RS15875 73f043396ccc5152812d3667de3ef1d2 124 PANTHER PTHR35174 2 121 2.1E-35 T 14-09-2016 AMK01_RS15875 73f043396ccc5152812d3667de3ef1d2 124 SUPERFAMILY SSF54909 1 117 4.02E-31 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS15875 73f043396ccc5152812d3667de3ef1d2 124 Pfam PF03795 YCII-related domain 1 114 5.6E-23 T 14-09-2016 IPR005545 YCII-related AMK01_RS15875 73f043396ccc5152812d3667de3ef1d2 124 PANTHER PTHR35174:SF3 2 121 2.1E-35 T 14-09-2016 AMK01_RS22465 3672b1278300c1752a6ca375ca403f8a 141 Gene3D G3DSA:3.20.20.80 1 140 2.2E-37 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS22465 3672b1278300c1752a6ca375ca403f8a 141 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 1 139 3.4E-21 T 14-09-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AMK01_RS22465 3672b1278300c1752a6ca375ca403f8a 141 SUPERFAMILY SSF51445 1 140 1.17E-31 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS22465 3672b1278300c1752a6ca375ca403f8a 141 PANTHER PTHR34142 2 140 7.0E-37 T 14-09-2016 AMK01_RS05710 a09f6ae12118c448c8645b199ca46c20 315 Pfam PF00535 Glycosyl transferase family 2 9 139 3.2E-25 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS05710 a09f6ae12118c448c8645b199ca46c20 315 Gene3D G3DSA:3.90.550.10 7 142 6.3E-27 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS05710 a09f6ae12118c448c8645b199ca46c20 315 SUPERFAMILY SSF53448 6 181 1.89E-31 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS05710 a09f6ae12118c448c8645b199ca46c20 315 PANTHER PTHR10859:SF86 8 308 4.8E-64 T 14-09-2016 AMK01_RS05710 a09f6ae12118c448c8645b199ca46c20 315 PANTHER PTHR10859 8 308 4.8E-64 T 14-09-2016 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 348 63.718 T 14-09-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 SUPERFAMILY SSF53067 6 326 3.89E-41 T 14-09-2016 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 105 124 3.7E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 138 150 3.7E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 161 182 3.7E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 84 104 3.7E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 3.7E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 279 288 3.7E-45 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 322 3.8E-100 T 14-09-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 Gene3D G3DSA:3.30.420.40 6 166 3.2E-47 T 14-09-2016 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 PANTHER PTHR11735 5 356 3.5E-152 T 14-09-2016 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 329 4.0E-128 T 14-09-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 PANTHER PTHR11735:SF6 5 356 3.5E-152 T 14-09-2016 AMK01_RS20075 f60b35f06d421471b2b93a0fbf4e46ba 365 Pfam PF00814 Glycoprotease family 32 323 3.6E-101 T 14-09-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 6 380 3.1E-89 T 14-09-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 Gene3D G3DSA:2.30.40.10 340 360 3.8E-6 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 SUPERFAMILY SSF51556 55 353 5.15E-85 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 Pfam PF01979 Amidohydrolase family 52 381 3.2E-23 T 14-09-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 PIRSF PIRSF038994 3 383 7.1E-98 T 14-09-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 Gene3D G3DSA:3.20.20.140 57 339 4.3E-86 T 14-09-2016 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 SUPERFAMILY SSF51338 6 54 1.3E-8 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 PANTHER PTHR11113:SF7 4 381 2.4E-107 T 14-09-2016 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 Gene3D G3DSA:2.30.40.10 2 56 9.0E-8 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 Gene3D G3DSA:2.30.40.10 361 369 9.0E-8 T 14-09-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK01_RS20725 145115558d631aa4955c803f1bb37a1c 383 PANTHER PTHR11113 4 381 2.4E-107 T 14-09-2016 AMK01_RS11220 08a006c0d85203803e7867799b97611f 379 PANTHER PTHR41519 39 376 2.8E-44 T 14-09-2016 AMK01_RS11220 08a006c0d85203803e7867799b97611f 379 Pfam PF13449 Esterase-like activity of phytase 62 360 6.5E-85 T 14-09-2016 IPR027372 Phytase-like domain AMK01_RS11220 08a006c0d85203803e7867799b97611f 379 PANTHER PTHR41519:SF1 39 376 2.8E-44 T 14-09-2016 AMK01_RS07725 0cdec9fe4ebb87bb5a0083aa10692a5b 160 Gene3D G3DSA:1.10.940.10 15 157 2.3E-37 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK01_RS07725 0cdec9fe4ebb87bb5a0083aa10692a5b 160 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 16 153 5.1E-40 T 14-09-2016 IPR011605 NusB antitermination factor GO:0006353 AMK01_RS07725 0cdec9fe4ebb87bb5a0083aa10692a5b 160 PANTHER PTHR11078 1 159 6.9E-37 T 14-09-2016 IPR011605 NusB antitermination factor GO:0006353 AMK01_RS07725 0cdec9fe4ebb87bb5a0083aa10692a5b 160 Pfam PF01029 NusB family 19 152 3.0E-33 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK01_RS07725 0cdec9fe4ebb87bb5a0083aa10692a5b 160 SUPERFAMILY SSF48013 15 157 8.9E-37 T 14-09-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK01_RS07725 0cdec9fe4ebb87bb5a0083aa10692a5b 160 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 14 155 21.978 T 14-09-2016 IPR011605 NusB antitermination factor GO:0006353 AMK01_RS18000 a22570f41bceced675d5f09b72693d34 703 PANTHER PTHR30460 363 700 3.2E-74 T 14-09-2016 AMK01_RS18000 a22570f41bceced675d5f09b72693d34 703 SUPERFAMILY SSF82861 456 510 6.41E-12 T 14-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMK01_RS18000 a22570f41bceced675d5f09b72693d34 703 SUPERFAMILY SSF50182 512 573 4.9E-10 T 14-09-2016 IPR010920 LSM domain AMK01_RS18000 a22570f41bceced675d5f09b72693d34 703 Pfam PF00924 Mechanosensitive ion channel 469 669 2.7E-44 T 14-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK01_RS18000 a22570f41bceced675d5f09b72693d34 703 PANTHER PTHR30460:SF0 363 700 3.2E-74 T 14-09-2016 AMK01_RS18000 a22570f41bceced675d5f09b72693d34 703 Gene3D G3DSA:2.30.30.60 528 573 9.0E-10 T 14-09-2016 AMK01_RS18000 a22570f41bceced675d5f09b72693d34 703 Gene3D G3DSA:3.30.70.100 582 667 1.5E-9 T 14-09-2016 AMK01_RS18000 a22570f41bceced675d5f09b72693d34 703 SUPERFAMILY SSF82689 576 676 2.35E-15 T 14-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 Gene3D G3DSA:3.40.470.10 290 482 2.8E-64 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 242 474 4.0E-104 T 14-09-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 SMART SM00987 314 474 8.2E-37 T 14-09-2016 AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 SMART SM00986 314 474 8.2E-37 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 Pfam PF13566 Domain of unknown function (DUF4130 81 239 2.5E-42 T 14-09-2016 IPR025404 Domain of unknown function DUF4130 AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 PANTHER PTHR33693:SF3 146 484 7.7E-129 T 14-09-2016 AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 9 240 9.8E-64 T 14-09-2016 IPR023875 DNA metabolism protein, putative AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 SUPERFAMILY SSF52141 290 482 1.18E-55 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 PANTHER PTHR33693 146 484 7.7E-129 T 14-09-2016 AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 Pfam PF03167 Uracil DNA glycosylase superfamily 314 460 3.2E-38 T 14-09-2016 IPR005122 Uracil-DNA glycosylase-like AMK01_RS15175 a46cd773fedca6d6190ee0f6d9a3c8e0 484 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 300 465 1.8E-41 T 14-09-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 PANTHER PTHR12128 7 308 1.3E-57 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 SMART SM01130 6 296 6.5E-69 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.7E-9 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.7E-9 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 1.7E-9 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.7E-9 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 PIRSF PIRSF001365 4 306 2.1E-63 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 Pfam PF00701 Dihydrodipicolinate synthetase family 7 292 2.9E-43 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 SUPERFAMILY SSF51569 3 294 4.5E-74 T 14-09-2016 AMK01_RS14320 08f029721735475f2d4d0b936cfa7d14 308 Gene3D G3DSA:3.20.20.70 5 295 9.2E-90 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS07855 eec312d9ba349e00485bb99c5dbaa038 585 SUPERFAMILY SSF48208 165 574 1.87E-35 T 14-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.8E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.8E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.8E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PANTHER PTHR24322 156 187 4.0E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PANTHER PTHR24322 10 138 4.0E-56 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 Gene3D G3DSA:3.40.50.720 2 255 1.4E-81 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 254 4.1E-59 T 14-09-2016 AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.5E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.5E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.5E-39 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 0.009 T 14-09-2016 AMK01_RS19110 459a6405ba2296786d3fff0e36056989 259 SUPERFAMILY SSF51735 4 255 1.3E-77 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Pfam PF02769 AIR synthase related protein, C-terminal domain 204 355 1.5E-31 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Pfam PF02769 AIR synthase related protein, C-terminal domain 571 707 4.7E-21 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Pfam PF00586 AIR synthase related protein, N-terminal domain 452 556 1.2E-21 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Pfam PF00586 AIR synthase related protein, N-terminal domain 87 189 1.8E-23 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 PANTHER PTHR10099:SF2 19 735 0.0 T 14-09-2016 AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 SUPERFAMILY SSF56042 568 734 9.57E-36 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 PANTHER PTHR10099 19 735 0.0 T 14-09-2016 AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 19 734 4.5E-291 T 14-09-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 SUPERFAMILY SSF55326 396 564 4.58E-52 T 14-09-2016 AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Gene3D G3DSA:3.90.650.10 214 356 2.0E-4 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Gene3D G3DSA:3.90.650.10 568 704 1.9E-7 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 743 329.508 T 14-09-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 PIRSF PIRSF001587 5 737 9.0E-282 T 14-09-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Gene3D G3DSA:3.30.1330.10 413 561 9.1E-55 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 Gene3D G3DSA:3.30.1330.10 51 194 2.3E-49 T 14-09-2016 IPR016188 PurM-like, N-terminal domain AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 SUPERFAMILY SSF55326 14 196 1.36E-49 T 14-09-2016 AMK01_RS11710 9dcef1f96c90ce488558ac7d1c1527da 743 SUPERFAMILY SSF56042 199 424 8.07E-54 T 14-09-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK01_RS12260 a2402e739b17f107bcd1771225c67e18 309 PANTHER PTHR32196 20 301 3.4E-54 T 14-09-2016 AMK01_RS12260 a2402e739b17f107bcd1771225c67e18 309 Gene3D G3DSA:3.40.50.2300 27 145 1.1E-32 T 14-09-2016 AMK01_RS12260 a2402e739b17f107bcd1771225c67e18 309 PANTHER PTHR32196:SF9 20 301 3.4E-54 T 14-09-2016 AMK01_RS12260 a2402e739b17f107bcd1771225c67e18 309 SUPERFAMILY SSF53822 28 304 2.2E-74 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS12260 a2402e739b17f107bcd1771225c67e18 309 Gene3D G3DSA:3.40.50.2300 146 304 1.2E-46 T 14-09-2016 AMK01_RS12260 a2402e739b17f107bcd1771225c67e18 309 Pfam PF13407 Periplasmic binding protein domain 30 284 5.0E-53 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS15265 1077e6dd3299856aa97ae0a4dca78b88 365 Pfam PF01699 Sodium/calcium exchanger protein 40 186 1.4E-14 T 14-09-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 AMK01_RS15265 1077e6dd3299856aa97ae0a4dca78b88 365 Pfam PF01699 Sodium/calcium exchanger protein 220 360 7.3E-7 T 14-09-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 AMK01_RS15265 1077e6dd3299856aa97ae0a4dca78b88 365 PANTHER PTHR37958 4 364 4.2E-52 T 14-09-2016 AMK01_RS15265 1077e6dd3299856aa97ae0a4dca78b88 365 PANTHER PTHR37958:SF1 4 364 4.2E-52 T 14-09-2016 AMK01_RS06995 8c7c8c00d75a03af62aaec6659798dc8 501 Pfam PF13440 Polysaccharide biosynthesis protein 40 345 1.9E-18 T 14-09-2016 AMK01_RS06995 8c7c8c00d75a03af62aaec6659798dc8 501 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 347 477 3.3E-7 T 14-09-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMK01_RS06530 e499a1b2dcd6ed2ec457ca1ce2ed767e 310 PANTHER PTHR30212:SF3 9 305 1.8E-67 T 14-09-2016 AMK01_RS06530 e499a1b2dcd6ed2ec457ca1ce2ed767e 310 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 176 270 3.0E-14 T 14-09-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK01_RS06530 e499a1b2dcd6ed2ec457ca1ce2ed767e 310 Gene3D G3DSA:2.30.110.10 175 280 5.3E-10 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS06530 e499a1b2dcd6ed2ec457ca1ce2ed767e 310 PANTHER PTHR30212 9 305 1.8E-67 T 14-09-2016 AMK01_RS06530 e499a1b2dcd6ed2ec457ca1ce2ed767e 310 SUPERFAMILY SSF50475 175 292 5.31E-11 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS04180 29d9e757468756925271c4222b049904 349 Gene3D G3DSA:3.20.20.100 1 322 3.0E-106 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS04180 29d9e757468756925271c4222b049904 349 PANTHER PTHR11732 1 332 2.9E-139 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS04180 29d9e757468756925271c4222b049904 349 SUPERFAMILY SSF51430 1 321 5.63E-106 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS04180 29d9e757468756925271c4222b049904 349 Pfam PF00248 Aldo/keto reductase family 15 322 3.9E-81 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 208 324 8.0E-36 T 14-09-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 SMART SM01340 207 325 2.3E-55 T 14-09-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 Gene3D G3DSA:3.30.230.10 213 324 2.5E-33 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 Pfam PF08676 MutL C terminal dimerisation domain 420 567 1.3E-48 T 14-09-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 91 97 - T 14-09-2016 IPR014762 DNA mismatch repair, conserved site AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 SUPERFAMILY SSF54211 194 325 2.47E-35 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 SUPERFAMILY SSF55874 2 204 4.98E-49 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 SMART SM00853 424 567 1.3E-53 T 14-09-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 SUPERFAMILY SSF118116 419 609 4.71E-57 T 14-09-2016 AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 116 2.1E-8 T 14-09-2016 AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 PANTHER PTHR10073 3 607 5.5E-138 T 14-09-2016 AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 Gene3D G3DSA:3.30.565.10 2 212 2.0E-66 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 607 27.908 T 14-09-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AMK01_RS04330 ca06d19887173ed5357d8eb93c6a564c 610 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 305 9.3E-90 T 14-09-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 SMART SM00382 284 480 0.32 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 SMART SM00382 31 219 8.7E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 SUPERFAMILY SSF52540 4 229 1.66E-56 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 SUPERFAMILY SSF52540 248 489 2.47E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 PANTHER PTHR24220 8 384 2.4E-179 T 14-09-2016 AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 PANTHER PTHR24220:SF239 8 384 2.4E-179 T 14-09-2016 AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 Pfam PF00005 ABC transporter 275 431 1.8E-18 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 Pfam PF00005 ABC transporter 23 170 2.0E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 Gene3D G3DSA:3.40.50.300 3 232 3.4E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01095 1208d1f6c9da5a73771ae4b9daa7b7ba 503 Gene3D G3DSA:3.40.50.300 256 489 2.0E-45 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19740 9577970057bac4a962f662108fddb468 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 12 138 3.3E-37 T 14-09-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 SUPERFAMILY SSF55347 132 270 4.25E-57 T 14-09-2016 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 152 235 3.2E-37 T 14-09-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 Gene3D G3DSA:3.40.50.720 6 156 1.3E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19740 9577970057bac4a962f662108fddb468 396 PANTHER PTHR30525 8 396 1.8E-179 T 14-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 387 1.9E-124 T 14-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 SUPERFAMILY SSF51735 8 156 8.86E-39 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19740 9577970057bac4a962f662108fddb468 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 11 389 44.179 T 14-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 Gene3D G3DSA:1.10.1740.10 310 390 1.0E-23 T 14-09-2016 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 PIRSF PIRSF006205 8 394 1.4E-139 T 14-09-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 SUPERFAMILY SSF69055 298 390 1.22E-24 T 14-09-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS19740 9577970057bac4a962f662108fddb468 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 384 4.2E-33 T 14-09-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 AMK01_RS12995 a4ea045a1f1ce635b5ca84f4ad5bb861 132 Pfam PF03610 PTS system fructose IIA component 9 123 8.0E-29 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK01_RS12995 a4ea045a1f1ce635b5ca84f4ad5bb861 132 PANTHER PTHR38594 6 130 4.1E-36 T 14-09-2016 AMK01_RS12995 a4ea045a1f1ce635b5ca84f4ad5bb861 132 SUPERFAMILY SSF53062 7 130 3.27E-32 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK01_RS12995 a4ea045a1f1ce635b5ca84f4ad5bb861 132 PANTHER PTHR38594:SF1 6 130 4.1E-36 T 14-09-2016 AMK01_RS12995 a4ea045a1f1ce635b5ca84f4ad5bb861 132 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 8 130 4.7E-38 T 14-09-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AMK01_RS12995 a4ea045a1f1ce635b5ca84f4ad5bb861 132 Gene3D G3DSA:3.40.50.510 6 130 1.5E-42 T 14-09-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 PANTHER PTHR35807 1 327 3.5E-20 T 14-09-2016 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 Gene3D G3DSA:1.25.40.10 434 634 2.4E-20 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 Pfam PF03704 Bacterial transcriptional activator domain 112 239 8.1E-16 T 14-09-2016 IPR005158 Bacterial transcriptional activator domain AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 SUPERFAMILY SSF46894 2 81 9.18E-6 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 SMART SM01043 100 240 9.5E-31 T 14-09-2016 IPR005158 Bacterial transcriptional activator domain AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 Gene3D G3DSA:3.40.50.10070 272 393 1.2E-4 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 SUPERFAMILY SSF48452 97 258 1.46E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 SUPERFAMILY SSF48452 435 605 1.14E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 SMART SM00028 569 602 17.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 SMART SM00028 414 452 190.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS06280 58ebe55602b2b543c317eb726a5d3dae 668 SMART SM00028 197 230 46.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 Gene3D G3DSA:1.20.58.220 120 223 4.6E-32 T 14-09-2016 AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 Pfam PF01895 PhoU domain 21 109 2.5E-21 T 14-09-2016 IPR026022 PhoU domain AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 Pfam PF01895 PhoU domain 125 209 9.5E-18 T 14-09-2016 IPR026022 PhoU domain AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 PANTHER PTHR10010 1 226 1.1E-68 T 14-09-2016 AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 9 218 7.6E-70 T 14-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 Gene3D G3DSA:1.20.58.220 4 114 8.2E-29 T 14-09-2016 AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 SUPERFAMILY SSF109755 8 227 9.21E-68 T 14-09-2016 AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 PANTHER PTHR10010:SF14 1 226 1.1E-68 T 14-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK01_RS02735 c22fc53c57c04476b25730f4af7e1486 237 PIRSF PIRSF003107 3 223 2.2E-59 T 14-09-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PANTHER PTHR24322 21 150 2.6E-49 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 259 7.7E-61 T 14-09-2016 AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PANTHER PTHR24322:SF330 21 150 2.6E-49 T 14-09-2016 AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 5.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 5.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 5.5E-10 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 4.3E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 4.3E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 4.3E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 4.3E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 4.3E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.3E-38 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 SUPERFAMILY SSF51735 12 261 1.5E-75 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PANTHER PTHR24322 168 200 2.6E-49 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 Gene3D G3DSA:3.40.50.720 11 262 1.7E-81 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12270 6edc05d336ae44d9d21bef9758f9548c 262 PANTHER PTHR24322:SF330 168 200 2.6E-49 T 14-09-2016 AMK01_RS18715 bb5a4b2adb19b398a51c2e3f36a7da7d 164 Pfam PF13673 Acetyltransferase (GNAT) domain 52 134 1.4E-11 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS18715 bb5a4b2adb19b398a51c2e3f36a7da7d 164 SUPERFAMILY SSF55729 11 135 9.47E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS18715 bb5a4b2adb19b398a51c2e3f36a7da7d 164 Gene3D G3DSA:3.40.630.30 13 151 7.0E-23 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS18715 bb5a4b2adb19b398a51c2e3f36a7da7d 164 PANTHER PTHR23091 16 156 7.1E-12 T 14-09-2016 AMK01_RS20920 71e06eea0f709b50ae1b2fce458a0e11 233 Gene3D G3DSA:1.10.3720.10 11 224 1.2E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20920 71e06eea0f709b50ae1b2fce458a0e11 233 SUPERFAMILY SSF161098 9 222 2.49E-48 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20920 71e06eea0f709b50ae1b2fce458a0e11 233 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 223 3.5E-64 T 14-09-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AMK01_RS20920 71e06eea0f709b50ae1b2fce458a0e11 233 PANTHER PTHR30183 1 230 1.4E-76 T 14-09-2016 AMK01_RS20920 71e06eea0f709b50ae1b2fce458a0e11 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 230 2.7E-21 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 46 244 1.9E-93 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 83 102 5.8E-60 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 63 83 5.8E-60 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 243 5.8E-60 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 173 193 5.8E-60 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 44 63 5.8E-60 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 194 215 5.8E-60 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PANTHER PTHR30587 41 245 6.3E-94 T 14-09-2016 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 142 154 9.9E-30 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 42 51 9.9E-30 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 234 244 9.9E-30 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 166 178 9.9E-30 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 102 114 9.9E-30 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 128 9.9E-30 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 Pfam PF00813 FliP family 46 240 2.2E-76 T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 221 233 - T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 PANTHER PTHR30587:SF0 41 245 6.3E-94 T 14-09-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AMK01_RS03530 da9ece9eab26ed2cc849be49f228e53e 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 173 188 - T 14-09-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AMK01_RS04055 bf65b5971fad343330a97a613005b933 127 Gene3D G3DSA:3.10.180.10 3 123 3.9E-24 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS04055 bf65b5971fad343330a97a613005b933 127 PANTHER PTHR35006 1 126 7.8E-35 T 14-09-2016 AMK01_RS04055 bf65b5971fad343330a97a613005b933 127 SUPERFAMILY SSF54593 3 125 2.26E-20 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS20755 c85065efd5eb6ea2f1fff5fe7fa9979d 83 SUPERFAMILY SSF47336 2 74 1.83E-16 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS20755 c85065efd5eb6ea2f1fff5fe7fa9979d 83 Gene3D G3DSA:1.10.1200.10 2 79 1.1E-23 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS20755 c85065efd5eb6ea2f1fff5fe7fa9979d 83 Pfam PF00550 Phosphopantetheine attachment site 4 71 1.0E-9 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS04160 d960e7ca29c7b51f8d68a809ca4c6bac 249 PANTHER PTHR30582 56 249 2.9E-65 T 14-09-2016 AMK01_RS04160 d960e7ca29c7b51f8d68a809ca4c6bac 249 Gene3D G3DSA:2.40.440.10 111 248 1.4E-38 T 14-09-2016 AMK01_RS04160 d960e7ca29c7b51f8d68a809ca4c6bac 249 SUPERFAMILY SSF141523 111 163 1.96E-35 T 14-09-2016 AMK01_RS04160 d960e7ca29c7b51f8d68a809ca4c6bac 249 SUPERFAMILY SSF141523 191 248 1.96E-35 T 14-09-2016 AMK01_RS04160 d960e7ca29c7b51f8d68a809ca4c6bac 249 Pfam PF03734 L,D-transpeptidase catalytic domain 117 248 2.6E-20 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS04160 d960e7ca29c7b51f8d68a809ca4c6bac 249 PANTHER PTHR30582:SF1 56 249 2.9E-65 T 14-09-2016 AMK01_RS02935 a2e08f83d64370c9f45525eb9da60642 266 TIGRFAM TIGR02186 alph_Pro_TM: conserved hypothetical protein 19 266 2.7E-105 T 14-09-2016 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane AMK01_RS02935 a2e08f83d64370c9f45525eb9da60642 266 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 35 265 2.1E-80 T 14-09-2016 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane AMK01_RS11910 b1cc822769927b4ddbc301d7cdc62d11 308 PANTHER PTHR10584:SF1 10 260 1.0E-81 T 14-09-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK01_RS11910 b1cc822769927b4ddbc301d7cdc62d11 308 Pfam PF04227 Indigoidine synthase A like protein 16 305 2.8E-129 T 14-09-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK01_RS11910 b1cc822769927b4ddbc301d7cdc62d11 308 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 308 43.491 T 14-09-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK01_RS11910 b1cc822769927b4ddbc301d7cdc62d11 308 PANTHER PTHR10584 10 260 1.0E-81 T 14-09-2016 AMK01_RS11910 b1cc822769927b4ddbc301d7cdc62d11 308 SUPERFAMILY SSF110581 11 306 2.35E-116 T 14-09-2016 AMK01_RS16125 4231b62d316f5905fe14163537a4e2a2 335 Pfam PF03466 LysR substrate binding domain 117 329 3.2E-27 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS16125 4231b62d316f5905fe14163537a4e2a2 335 Gene3D G3DSA:3.40.190.10 112 240 1.6E-21 T 14-09-2016 AMK01_RS16125 4231b62d316f5905fe14163537a4e2a2 335 SUPERFAMILY SSF53850 118 332 4.34E-29 T 14-09-2016 AMK01_RS16125 4231b62d316f5905fe14163537a4e2a2 335 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 32 90 3.5E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS16125 4231b62d316f5905fe14163537a4e2a2 335 PANTHER PTHR30126 30 332 3.0E-61 T 14-09-2016 AMK01_RS16125 4231b62d316f5905fe14163537a4e2a2 335 SUPERFAMILY SSF46785 30 140 2.08E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16125 4231b62d316f5905fe14163537a4e2a2 335 PANTHER PTHR30126:SF3 30 332 3.0E-61 T 14-09-2016 AMK01_RS16125 4231b62d316f5905fe14163537a4e2a2 335 Gene3D G3DSA:1.10.10.10 31 111 6.3E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18685 80554ae68c1d9080f3cb3fe2ea90a324 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 10 311 5.7E-19 T 14-09-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK01_RS18685 80554ae68c1d9080f3cb3fe2ea90a324 321 Gene3D G3DSA:3.40.50.720 5 112 2.3E-26 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18685 80554ae68c1d9080f3cb3fe2ea90a324 321 PANTHER PTHR10996 1 311 8.7E-101 T 14-09-2016 AMK01_RS18685 80554ae68c1d9080f3cb3fe2ea90a324 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 280 9.3E-43 T 14-09-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK01_RS18685 80554ae68c1d9080f3cb3fe2ea90a324 321 PANTHER PTHR10996:SF152 1 311 8.7E-101 T 14-09-2016 AMK01_RS18685 80554ae68c1d9080f3cb3fe2ea90a324 321 SUPERFAMILY SSF51735 99 281 1.26E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18685 80554ae68c1d9080f3cb3fe2ea90a324 321 Gene3D G3DSA:3.40.50.720 113 282 5.1E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18685 80554ae68c1d9080f3cb3fe2ea90a324 321 SUPERFAMILY SSF52283 3 131 3.02E-26 T 14-09-2016 AMK01_RS19075 d9cdc666b5c3f1d6fcd35cf1bbe6db0d 296 Gene3D G3DSA:2.70.98.10 7 287 2.5E-14 T 14-09-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 AMK01_RS19075 d9cdc666b5c3f1d6fcd35cf1bbe6db0d 296 PANTHER PTHR10091 8 289 5.7E-36 T 14-09-2016 AMK01_RS19075 d9cdc666b5c3f1d6fcd35cf1bbe6db0d 296 SUPERFAMILY SSF74650 9 287 2.26E-41 T 14-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK01_RS19075 d9cdc666b5c3f1d6fcd35cf1bbe6db0d 296 PANTHER PTHR10091:SF5 8 289 5.7E-36 T 14-09-2016 AMK01_RS19075 d9cdc666b5c3f1d6fcd35cf1bbe6db0d 296 Pfam PF01263 Aldose 1-epimerase 9 283 4.2E-31 T 14-09-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMK01_RS05160 29d484757835143eda59bb6ece3c2221 436 Pfam PF01420 Type I restriction modification DNA specificity domain 5 169 4.4E-26 T 14-09-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AMK01_RS05160 29d484757835143eda59bb6ece3c2221 436 PANTHER PTHR30408:SF7 1 409 1.4E-24 T 14-09-2016 AMK01_RS05160 29d484757835143eda59bb6ece3c2221 436 PANTHER PTHR30408 1 409 1.4E-24 T 14-09-2016 AMK01_RS05160 29d484757835143eda59bb6ece3c2221 436 SUPERFAMILY SSF116734 204 410 2.29E-21 T 14-09-2016 AMK01_RS05160 29d484757835143eda59bb6ece3c2221 436 SUPERFAMILY SSF116734 3 205 1.41E-41 T 14-09-2016 AMK01_RS11015 8a9bb398aa1c9077e444d34bacc34a91 457 SUPERFAMILY SSF53098 132 292 6.98E-18 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS11015 8a9bb398aa1c9077e444d34bacc34a91 457 ProDom PD027657 PLASMID TRANSPOSASE TRANSPOSABLE DNA Y4JM Y4BF RIORF49 DNA-BINDING ELEMENT RECOMBINATION 414 457 2.0E-5 T 14-09-2016 AMK01_RS11015 8a9bb398aa1c9077e444d34bacc34a91 457 Gene3D G3DSA:3.30.420.10 131 291 1.6E-17 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS11015 8a9bb398aa1c9077e444d34bacc34a91 457 Pfam PF13551 Winged helix-turn helix 13 74 3.7E-11 T 14-09-2016 AMK01_RS11015 8a9bb398aa1c9077e444d34bacc34a91 457 SUPERFAMILY SSF46689 9 118 1.27E-9 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS04770 3c70bafd526aefc5335cac174009636e 196 PANTHER PTHR23029 3 195 1.1E-31 T 14-09-2016 AMK01_RS04770 3c70bafd526aefc5335cac174009636e 196 Gene3D G3DSA:3.40.50.1240 3 190 1.6E-46 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS04770 3c70bafd526aefc5335cac174009636e 196 SMART SM00855 2 161 1.5E-23 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS04770 3c70bafd526aefc5335cac174009636e 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 193 2.4E-40 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS04770 3c70bafd526aefc5335cac174009636e 196 PIRSF PIRSF000709 2 195 2.5E-9 T 14-09-2016 AMK01_RS04770 3c70bafd526aefc5335cac174009636e 196 SUPERFAMILY SSF53254 3 192 1.3E-44 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS04770 3c70bafd526aefc5335cac174009636e 196 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-09-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 AMK01_RS04770 3c70bafd526aefc5335cac174009636e 196 PANTHER PTHR23029:SF1 3 195 1.1E-31 T 14-09-2016 AMK01_RS05955 0fcf62c78a4a18b0289237029815661e 154 Pfam PF01161 Phosphatidylethanolamine-binding protein 16 151 2.1E-31 T 14-09-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK01_RS05955 0fcf62c78a4a18b0289237029815661e 154 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 21 151 2.4E-28 T 14-09-2016 IPR005247 YbhB/YbcL AMK01_RS05955 0fcf62c78a4a18b0289237029815661e 154 SUPERFAMILY SSF49777 3 153 2.22E-39 T 14-09-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK01_RS05955 0fcf62c78a4a18b0289237029815661e 154 Gene3D G3DSA:3.90.280.10 2 153 1.1E-44 T 14-09-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK01_RS05955 0fcf62c78a4a18b0289237029815661e 154 PANTHER PTHR30289 1 151 9.7E-35 T 14-09-2016 AMK01_RS20990 b947ad561c4b595f15fe9488e368b9b3 145 SUPERFAMILY SSF55486 14 136 1.71E-35 T 14-09-2016 AMK01_RS20990 b947ad561c4b595f15fe9488e368b9b3 145 PANTHER PTHR41522 1 141 1.6E-30 T 14-09-2016 AMK01_RS20990 b947ad561c4b595f15fe9488e368b9b3 145 Gene3D G3DSA:3.40.390.10 105 131 2.3E-5 T 14-09-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK01_RS20990 b947ad561c4b595f15fe9488e368b9b3 145 Pfam PF06262 Zinicin-like metallopeptidase 41 136 6.5E-34 T 14-09-2016 IPR010428 Zinicin-like metallopeptidase AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 PANTHER PTHR26402:SF471 34 243 2.9E-17 T 14-09-2016 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 Gene3D G3DSA:1.10.10.10 176 240 1.2E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 SUPERFAMILY SSF46894 179 242 2.28E-15 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 187 238 5.1E-16 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 SUPERFAMILY SSF52172 34 152 1.61E-7 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 201 7.9E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 217 7.9E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 229 7.9E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 PANTHER PTHR26402 34 243 2.9E-17 T 14-09-2016 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 Gene3D G3DSA:3.40.50.2300 35 152 3.4E-8 T 14-09-2016 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 ProSitePatterns PS00622 LuxR-type HTH domain signature. 201 228 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS06960 31da358e7281d77406f63b100105bb4f 251 SMART SM00421 184 241 1.0E-14 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS08530 ebd33efdb2d2a5497d43581cca0ccf1d 120 Gene3D G3DSA:3.30.420.100 25 120 9.5E-40 T 14-09-2016 AMK01_RS08530 ebd33efdb2d2a5497d43581cca0ccf1d 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 120 6.2E-41 T 14-09-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08530 ebd33efdb2d2a5497d43581cca0ccf1d 120 PANTHER PTHR12899 1 120 7.6E-44 T 14-09-2016 AMK01_RS08530 ebd33efdb2d2a5497d43581cca0ccf1d 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 120 28.212 T 14-09-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08530 ebd33efdb2d2a5497d43581cca0ccf1d 120 SUPERFAMILY SSF53137 4 118 3.49E-52 T 14-09-2016 AMK01_RS08530 ebd33efdb2d2a5497d43581cca0ccf1d 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 120 3.9E-44 T 14-09-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 65 77 1.2E-19 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 250 269 1.2E-19 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 45 63 1.2E-19 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 167 180 1.2E-19 T 14-09-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 SUPERFAMILY SSF51419 17 262 6.98E-67 T 14-09-2016 IPR029066 PLP-binding barrel AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 SUPERFAMILY SSF50621 230 375 2.72E-32 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 Gene3D G3DSA:2.40.37.10 247 376 7.9E-27 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 27 260 5.7E-57 T 14-09-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01182 Ornithine decarboxylase signature 43 70 2.4E-22 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01182 Ornithine decarboxylase signature 117 139 2.4E-22 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01182 Ornithine decarboxylase signature 87 111 2.4E-22 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01182 Ornithine decarboxylase signature 319 329 2.4E-22 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PRINTS PR01182 Ornithine decarboxylase signature 17 41 2.4E-22 T 14-09-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 Gene3D G3DSA:3.20.20.10 26 246 9.2E-68 T 14-09-2016 IPR029066 PLP-binding barrel AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PANTHER PTHR11482:SF6 2 377 6.9E-124 T 14-09-2016 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 45 63 - T 14-09-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 PANTHER PTHR11482 2 377 6.9E-124 T 14-09-2016 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 269 374 4.1E-14 T 14-09-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMK01_RS18740 b415ae40caba631d48c645f06191bfe8 377 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 202 218 - T 14-09-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AMK01_RS14915 465ecf0e63c76b2c1040032c2742f824 203 Gene3D G3DSA:2.30.110.10 12 187 1.2E-57 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS14915 465ecf0e63c76b2c1040032c2742f824 203 PANTHER PTHR33798:SF1 5 198 2.1E-72 T 14-09-2016 AMK01_RS14915 465ecf0e63c76b2c1040032c2742f824 203 PANTHER PTHR33798 5 198 2.1E-72 T 14-09-2016 AMK01_RS14915 465ecf0e63c76b2c1040032c2742f824 203 SMART SM00903 21 173 2.5E-21 T 14-09-2016 IPR002563 Flavin reductase like domain GO:0010181 AMK01_RS14915 465ecf0e63c76b2c1040032c2742f824 203 Pfam PF01613 Flavin reductase like domain 24 172 1.1E-20 T 14-09-2016 IPR002563 Flavin reductase like domain GO:0010181 AMK01_RS14915 465ecf0e63c76b2c1040032c2742f824 203 SUPERFAMILY SSF50475 3 198 3.48E-47 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 SUPERFAMILY SSF53850 5 254 8.71E-68 T 14-09-2016 AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 Gene3D G3DSA:3.40.190.10 113 209 2.2E-26 T 14-09-2016 AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 PANTHER PTHR18966:SF208 21 255 6.8E-79 T 14-09-2016 AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 14-09-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 253 2.9E-65 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 PANTHER PTHR18966 21 255 6.8E-79 T 14-09-2016 AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 SMART SM00062 35 254 2.4E-71 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 Gene3D G3DSA:3.40.190.10 32 112 1.5E-46 T 14-09-2016 AMK01_RS20570 9dc51a80a4279298655c1e370ab363b9 257 Gene3D G3DSA:3.40.190.10 213 255 1.5E-46 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 PANTHER PTHR11476:SF5 230 366 1.3E-35 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 Gene3D G3DSA:3.30.930.10 284 366 3.1E-50 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 Gene3D G3DSA:3.30.930.10 12 162 3.1E-50 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 Gene3D G3DSA:3.30.930.10 236 237 3.1E-50 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 PANTHER PTHR11476 230 366 1.3E-35 T 14-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 PANTHER PTHR11476:SF5 23 173 1.3E-35 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 1 360 24.802 T 14-09-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 SUPERFAMILY SSF55681 242 368 3.23E-42 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 SUPERFAMILY SSF55681 13 169 3.23E-42 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 Pfam PF13393 Histidyl-tRNA synthetase 9 169 4.3E-18 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 Pfam PF13393 Histidyl-tRNA synthetase 239 366 3.8E-12 T 14-09-2016 AMK01_RS04205 c5dde271db4b2d9197a6213ca336fa03 373 PANTHER PTHR11476 23 173 1.3E-35 T 14-09-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK01_RS08370 7fec1734e6a1daf56c8ba4e093e764ff 297 Gene3D G3DSA:3.40.50.720 2 230 2.9E-41 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08370 7fec1734e6a1daf56c8ba4e093e764ff 297 SUPERFAMILY SSF51735 2 296 1.41E-53 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS08370 7fec1734e6a1daf56c8ba4e093e764ff 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 200 1.3E-22 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS08370 7fec1734e6a1daf56c8ba4e093e764ff 297 PANTHER PTHR10366 4 293 6.4E-72 T 14-09-2016 AMK01_RS08370 7fec1734e6a1daf56c8ba4e093e764ff 297 PANTHER PTHR10366:SF35 4 293 6.4E-72 T 14-09-2016 AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 Pfam PF00890 FAD binding domain 46 477 1.1E-26 T 14-09-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 45 64 1.6E-7 T 14-09-2016 AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 464 1.6E-7 T 14-09-2016 AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 Gene3D G3DSA:3.50.50.60 435 493 2.8E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 Gene3D G3DSA:3.50.50.60 45 281 2.8E-38 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 PANTHER PTHR11632:SF6 46 491 3.2E-49 T 14-09-2016 AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 SUPERFAMILY SSF51905 44 278 5.19E-28 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 SUPERFAMILY SSF51905 443 493 5.19E-28 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS08715 b6b8b9c197bd50ac5c5ca7752d787928 693 PANTHER PTHR11632 46 491 3.2E-49 T 14-09-2016 AMK01_RS13695 b22b970c027ab258adf56b3d10d74be7 133 Pfam PF00072 Response regulator receiver domain 4 116 2.3E-27 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS13695 b22b970c027ab258adf56b3d10d74be7 133 SMART SM00448 2 116 4.0E-37 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS13695 b22b970c027ab258adf56b3d10d74be7 133 SUPERFAMILY SSF52172 1 123 1.71E-38 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS13695 b22b970c027ab258adf56b3d10d74be7 133 Gene3D G3DSA:3.40.50.2300 2 126 8.1E-38 T 14-09-2016 AMK01_RS13695 b22b970c027ab258adf56b3d10d74be7 133 PANTHER PTHR26402 2 117 1.6E-36 T 14-09-2016 AMK01_RS13990 784d1ec4519d59b3d2ea4f5722b5b6c7 255 PANTHER PTHR10992 22 252 9.6E-29 T 14-09-2016 AMK01_RS13990 784d1ec4519d59b3d2ea4f5722b5b6c7 255 SUPERFAMILY SSF53474 22 252 2.86E-36 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS13990 784d1ec4519d59b3d2ea4f5722b5b6c7 255 Gene3D G3DSA:3.40.50.1820 25 254 9.1E-42 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS13990 784d1ec4519d59b3d2ea4f5722b5b6c7 255 Pfam PF12697 Alpha/beta hydrolase family 28 248 4.4E-19 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS13990 784d1ec4519d59b3d2ea4f5722b5b6c7 255 PANTHER PTHR10992:SF733 22 252 9.6E-29 T 14-09-2016 AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 SUPERFAMILY SSF53850 88 296 6.88E-42 T 14-09-2016 AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 Pfam PF03466 LysR substrate binding domain 89 292 5.8E-38 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.9E-10 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.9E-10 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.9E-10 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.2E-23 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 SUPERFAMILY SSF46785 3 86 1.7E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 Gene3D G3DSA:3.40.190.10 93 192 5.6E-25 T 14-09-2016 AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 PANTHER PTHR30537 1 296 1.6E-82 T 14-09-2016 AMK01_RS15220 1398bfd4f5c312c14cd4d07676126194 298 Gene3D G3DSA:1.10.10.10 3 82 1.6E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07000 24c7efbf9300eb5b670f54a5bd370cc4 438 Gene3D G3DSA:3.30.1950.10 67 123 9.4E-8 T 14-09-2016 AMK01_RS07000 24c7efbf9300eb5b670f54a5bd370cc4 438 PANTHER PTHR33619 63 155 2.0E-14 T 14-09-2016 AMK01_RS07000 24c7efbf9300eb5b670f54a5bd370cc4 438 Gene3D G3DSA:3.10.560.10 338 361 5.8E-7 T 14-09-2016 AMK01_RS07000 24c7efbf9300eb5b670f54a5bd370cc4 438 Gene3D G3DSA:3.10.560.10 124 173 5.8E-7 T 14-09-2016 AMK01_RS07000 24c7efbf9300eb5b670f54a5bd370cc4 438 Pfam PF02563 Polysaccharide biosynthesis/export protein 67 120 9.1E-7 T 14-09-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMK01_RS18765 11d1644260a705dd13502ad4c8e514d2 231 PANTHER PTHR13256 2 211 3.2E-65 T 14-09-2016 AMK01_RS18765 11d1644260a705dd13502ad4c8e514d2 231 PANTHER PTHR13256:SF22 2 211 3.2E-65 T 14-09-2016 AMK01_RS18765 11d1644260a705dd13502ad4c8e514d2 231 Gene3D G3DSA:3.40.630.30 7 204 1.4E-47 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS18765 11d1644260a705dd13502ad4c8e514d2 231 SUPERFAMILY SSF55729 15 188 8.89E-32 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS18765 11d1644260a705dd13502ad4c8e514d2 231 Pfam PF13302 Acetyltransferase (GNAT) domain 62 163 2.4E-10 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS07465 e2e7804212d81d610f92d20609dee2fd 308 SUPERFAMILY SSF51735 3 170 2.41E-38 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07465 e2e7804212d81d610f92d20609dee2fd 308 Gene3D G3DSA:3.30.360.10 132 291 3.1E-5 T 14-09-2016 AMK01_RS07465 e2e7804212d81d610f92d20609dee2fd 308 Gene3D G3DSA:3.40.50.720 1 131 9.5E-31 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS07465 e2e7804212d81d610f92d20609dee2fd 308 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 113 2.5E-17 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS07465 e2e7804212d81d610f92d20609dee2fd 308 PANTHER PTHR22604:SF131 1 297 3.8E-120 T 14-09-2016 AMK01_RS07465 e2e7804212d81d610f92d20609dee2fd 308 PANTHER PTHR22604 1 297 3.8E-120 T 14-09-2016 AMK01_RS18115 673207e56520f2c6c8e10f4b55ed17f4 62 SUPERFAMILY SSF160113 1 58 2.35E-20 T 14-09-2016 IPR010879 Domain of unknown function DUF1508 AMK01_RS18115 673207e56520f2c6c8e10f4b55ed17f4 62 PANTHER PTHR40606 1 50 1.2E-15 T 14-09-2016 AMK01_RS18115 673207e56520f2c6c8e10f4b55ed17f4 62 Gene3D G3DSA:3.30.160.160 3 48 3.6E-23 T 14-09-2016 IPR010879 Domain of unknown function DUF1508 AMK01_RS18115 673207e56520f2c6c8e10f4b55ed17f4 62 PANTHER PTHR40606:SF1 1 50 1.2E-15 T 14-09-2016 AMK01_RS18115 673207e56520f2c6c8e10f4b55ed17f4 62 Pfam PF07411 Domain of unknown function (DUF1508) 9 56 2.7E-23 T 14-09-2016 IPR010879 Domain of unknown function DUF1508 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 Gene3D G3DSA:3.40.190.10 180 263 3.1E-10 T 14-09-2016 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 Pfam PF03466 LysR substrate binding domain 90 294 3.0E-41 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 SUPERFAMILY SSF46785 3 83 6.77E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 PANTHER PTHR30537:SF1 1 297 8.5E-183 T 14-09-2016 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 SUPERFAMILY SSF53850 91 294 1.77E-42 T 14-09-2016 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 PANTHER PTHR30537 1 297 8.5E-183 T 14-09-2016 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.6E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.6E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.6E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 Gene3D G3DSA:1.10.10.10 6 90 2.1E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.9E-21 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12300 8ca61ebb7fed045d3f038a6d7028c4b7 297 Gene3D G3DSA:3.40.190.10 94 179 1.8E-14 T 14-09-2016 AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 PANTHER PTHR23264 1 71 1.1E-146 T 14-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 PANTHER PTHR23264 87 388 1.1E-146 T 14-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 Gene3D G3DSA:3.40.50.300 123 370 8.6E-104 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 Pfam PF01883 Domain of unknown function DUF59 6 75 8.2E-18 T 14-09-2016 IPR002744 Domain of unknown function DUF59 AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 SUPERFAMILY SSF117916 1 84 2.58E-19 T 14-09-2016 AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 SUPERFAMILY SSF52540 131 375 9.0E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 ProSitePatterns PS01215 Mrp family signature. 234 250 - T 14-09-2016 IPR000808 Mrp, conserved site GO:0005524 AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 128 370 9.7E-100 T 14-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK01_RS04380 1f36d6e3ba76a98a167233c087b5122b 388 Hamap MF_02040 Iron-sulfur cluster carrier protein. 123 371 36.57 T 14-09-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK01_RS20240 8fcfb23abaf22082f4f3bd2c65bc5437 847 PANTHER PTHR30287 6 847 3.4E-115 T 14-09-2016 AMK01_RS20240 8fcfb23abaf22082f4f3bd2c65bc5437 847 Pfam PF02687 FtsX-like permease family 268 382 4.7E-11 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK01_RS20240 8fcfb23abaf22082f4f3bd2c65bc5437 847 Pfam PF02687 FtsX-like permease family 728 837 1.1E-9 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK01_RS13610 d00264b8c5c975ac0d6dd23ac5552d3c 312 SUPERFAMILY SSF52266 79 307 2.17E-28 T 14-09-2016 IPR013830 SGNH hydrolase-type esterase domain AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 SUPERFAMILY SSF47384 614 697 1.41E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 SUPERFAMILY SSF55785 479 567 7.5E-7 T 14-09-2016 IPR000014 PAS domain AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 744 850 1.2E-23 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 SMART SM00387 743 853 8.9E-31 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 SUPERFAMILY SSF55785 351 411 3.43E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 SUPERFAMILY SSF55874 686 851 1.83E-42 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 PANTHER PTHR24423:SF486 479 850 2.0E-83 T 14-09-2016 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 Gene3D G3DSA:3.30.565.10 683 851 4.3E-40 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 PANTHER PTHR24423 479 850 2.0E-83 T 14-09-2016 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 SMART SM00388 629 697 7.0E-17 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 Pfam PF12860 PAS fold 373 486 2.2E-9 T 14-09-2016 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 Pfam PF00512 His Kinase A (phospho-acceptor) domain 630 697 5.7E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 Gene3D G3DSA:3.30.450.20 481 566 2.2E-5 T 14-09-2016 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 Pfam PF13188 PAS domain 501 531 0.029 T 14-09-2016 IPR000014 PAS domain AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 831 1.8E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 780 794 1.8E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 837 850 1.8E-11 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 Gene3D G3DSA:3.30.450.20 248 353 1.1E-4 T 14-09-2016 AMK01_RS00155 09635e85de1866ff7a32733dadb260c3 861 Gene3D G3DSA:1.10.287.130 621 682 1.1E-15 T 14-09-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK01_RS11340 1cfd8ed67a62ab5c85d74dee873018ab 145 PIRSF PIRSF032025 1 145 4.5E-74 T 14-09-2016 IPR008320 Uncharacterised conserved protein UCP032025 AMK01_RS11340 1cfd8ed67a62ab5c85d74dee873018ab 145 Pfam PF07370 Protein of unknown function (DUF1489) 5 145 1.3E-55 T 14-09-2016 IPR008320 Uncharacterised conserved protein UCP032025 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 PANTHER PTHR36447:SF1 15 531 1.0E-139 T 14-09-2016 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 PANTHER PTHR36447:SF1 552 710 1.0E-139 T 14-09-2016 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 Gene3D G3DSA:3.40.50.880 440 643 7.4E-29 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 Pfam PF08533 Beta-galactosidase C-terminal domain 650 707 2.3E-7 T 14-09-2016 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 PANTHER PTHR36447 552 710 1.0E-139 T 14-09-2016 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 PANTHER PTHR36447 15 531 1.0E-139 T 14-09-2016 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 Pfam PF08532 Beta-galactosidase trimerisation domain 568 640 5.4E-6 T 14-09-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 Pfam PF08532 Beta-galactosidase trimerisation domain 441 532 8.7E-18 T 14-09-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 Gene3D G3DSA:3.20.20.80 19 398 1.8E-102 T 14-09-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 Pfam PF02449 Beta-galactosidase 24 396 1.2E-103 T 14-09-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 SUPERFAMILY SSF52317 405 531 1.51E-32 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 SUPERFAMILY SSF52317 559 641 1.51E-32 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS13640 4e094b84a3ca3aa3ebde591b4ed88871 710 SUPERFAMILY SSF51445 13 378 1.13E-89 T 14-09-2016 IPR017853 Glycoside hydrolase superfamily AMK01_RS15330 14e0efc1979109b7f522e201cc56da8a 150 Pfam PF07886 BA14K-like protein 119 147 1.4E-12 T 14-09-2016 IPR012413 BA14k family GO:0009405 AMK01_RS03310 02c1d77887aa67a80759c1aff5bc4bb0 539 Gene3D G3DSA:3.10.180.10 1 127 4.3E-28 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS03310 02c1d77887aa67a80759c1aff5bc4bb0 539 Gene3D G3DSA:3.10.180.10 141 304 6.1E-26 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS03310 02c1d77887aa67a80759c1aff5bc4bb0 539 PANTHER PTHR36110:SF2 1 284 1.0E-75 T 14-09-2016 AMK01_RS03310 02c1d77887aa67a80759c1aff5bc4bb0 539 SUPERFAMILY SSF53474 312 515 2.8E-42 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS03310 02c1d77887aa67a80759c1aff5bc4bb0 539 PANTHER PTHR36110 1 284 1.0E-75 T 14-09-2016 AMK01_RS03310 02c1d77887aa67a80759c1aff5bc4bb0 539 Gene3D G3DSA:3.40.50.1820 305 517 5.9E-64 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS03310 02c1d77887aa67a80759c1aff5bc4bb0 539 SUPERFAMILY SSF54593 1 286 5.72E-31 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS03310 02c1d77887aa67a80759c1aff5bc4bb0 539 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 264 4.7E-16 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS07805 945317f3cd6925c2bbc0a84895c3cd03 789 SUPERFAMILY SSF48452 476 527 4.09E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS07805 945317f3cd6925c2bbc0a84895c3cd03 789 SUPERFAMILY SSF48452 710 762 4.09E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS07805 945317f3cd6925c2bbc0a84895c3cd03 789 SUPERFAMILY SSF48452 644 682 4.09E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS07805 945317f3cd6925c2bbc0a84895c3cd03 789 Gene3D G3DSA:1.25.40.10 632 770 2.0E-19 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS07805 945317f3cd6925c2bbc0a84895c3cd03 789 Gene3D G3DSA:1.25.40.10 363 420 2.0E-19 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS07805 945317f3cd6925c2bbc0a84895c3cd03 789 Gene3D G3DSA:1.25.40.10 457 520 2.0E-19 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 Gene3D G3DSA:3.40.190.10 86 187 6.2E-19 T 14-09-2016 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 SUPERFAMILY SSF46785 1 110 4.09E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 PANTHER PTHR30579:SF0 1 276 1.3E-69 T 14-09-2016 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 SUPERFAMILY SSF53850 88 281 1.09E-29 T 14-09-2016 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-19 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 Gene3D G3DSA:3.40.190.10 188 236 2.7E-9 T 14-09-2016 AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 Gene3D G3DSA:1.10.10.10 1 78 3.5E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 Pfam PF03466 LysR substrate binding domain 86 276 2.4E-30 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS18405 dc3d8a861244738ee3794ebbb57f6150 284 PANTHER PTHR30579 1 276 1.3E-69 T 14-09-2016 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 SUPERFAMILY SSF55961 155 403 5.68E-54 T 14-09-2016 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 PANTHER PTHR21266:SF2 20 404 2.0E-76 T 14-09-2016 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 Gene3D G3DSA:2.102.10.10 41 146 6.5E-36 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 SUPERFAMILY SSF50022 8 152 1.06E-46 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 Gene3D G3DSA:3.90.380.10 147 400 2.2E-16 T 14-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 177 399 1.1E-39 T 14-09-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 Pfam PF00355 Rieske [2Fe-2S] domain 43 119 5.6E-16 T 14-09-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 3.2E-27 T 14-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 3.2E-27 T 14-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 3.2E-27 T 14-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 3.2E-27 T 14-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 138 164 3.2E-27 T 14-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 175 197 3.2E-27 T 14-09-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AMK01_RS04590 38104252bf4ea902b8f870614e733f69 414 PANTHER PTHR21266 20 404 2.0E-76 T 14-09-2016 AMK01_RS02870 3d2b933d8b0b89f62dcce354e1dd64f1 172 PANTHER PTHR31157 40 166 1.2E-24 T 14-09-2016 AMK01_RS02870 3d2b933d8b0b89f62dcce354e1dd64f1 172 PANTHER PTHR31157:SF1 40 166 1.2E-24 T 14-09-2016 AMK01_RS02870 3d2b933d8b0b89f62dcce354e1dd64f1 172 Gene3D G3DSA:3.40.33.10 40 150 2.5E-8 T 14-09-2016 IPR014044 CAP domain AMK01_RS02870 3d2b933d8b0b89f62dcce354e1dd64f1 172 Pfam PF00188 Cysteine-rich secretory protein family 49 155 3.0E-15 T 14-09-2016 IPR014044 CAP domain AMK01_RS02870 3d2b933d8b0b89f62dcce354e1dd64f1 172 SUPERFAMILY SSF55797 42 160 8.55E-16 T 14-09-2016 IPR014044 CAP domain AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 373 8.1E-106 T 14-09-2016 IPR028053 Membrane insertase YidC, N-terminal AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 Pfam PF14849 YidC periplasmic domain 85 364 9.1E-84 T 14-09-2016 IPR028053 Membrane insertase YidC, N-terminal AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 574 22.772 T 14-09-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PANTHER PTHR12428:SF14 348 484 1.1E-69 T 14-09-2016 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PANTHER PTHR12428:SF14 504 570 1.1E-69 T 14-09-2016 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PRINTS PR01900 YidC translocation/secretion protein signature 527 551 5.9E-22 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PRINTS PR01900 YidC translocation/secretion protein signature 508 523 5.9E-22 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PRINTS PR01900 YidC translocation/secretion protein signature 360 376 5.9E-22 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PRINTS PR00701 60kDa inner membrane protein signature 436 459 1.4E-17 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PRINTS PR00701 60kDa inner membrane protein signature 265 280 1.4E-17 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PRINTS PR00701 60kDa inner membrane protein signature 91 112 1.4E-17 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PRINTS PR00701 60kDa inner membrane protein signature 345 365 1.4E-17 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PANTHER PTHR12428 504 570 1.1E-69 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 PANTHER PTHR12428 348 484 1.1E-69 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 Pfam PF02096 60Kd inner membrane protein 375 572 5.4E-57 T 14-09-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK01_RS02365 7282666c0c077aac5857579dbaf50a81 596 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 374 572 2.7E-65 T 14-09-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AMK01_RS18450 576bc11fd67eb278202579e72b892c20 340 Pfam PF02530 Porin subfamily 24 324 4.7E-92 T 14-09-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 AMK01_RS18450 576bc11fd67eb278202579e72b892c20 340 SUPERFAMILY SSF56935 57 340 8.66E-19 T 14-09-2016 AMK01_RS18450 576bc11fd67eb278202579e72b892c20 340 Gene3D G3DSA:2.40.160.10 57 330 4.0E-29 T 14-09-2016 IPR023614 Porin domain AMK01_RS18820 abe893c473336f36a9a3aec65f4b05a5 315 SUPERFAMILY SSF53822 8 308 1.85E-63 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS18820 abe893c473336f36a9a3aec65f4b05a5 315 Gene3D G3DSA:3.40.50.2300 150 309 5.8E-39 T 14-09-2016 AMK01_RS18820 abe893c473336f36a9a3aec65f4b05a5 315 PANTHER PTHR32196 21 309 3.4E-35 T 14-09-2016 AMK01_RS18820 abe893c473336f36a9a3aec65f4b05a5 315 PANTHER PTHR32196:SF9 21 309 3.4E-35 T 14-09-2016 AMK01_RS18820 abe893c473336f36a9a3aec65f4b05a5 315 Pfam PF13407 Periplasmic binding protein domain 28 274 1.7E-42 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS18820 abe893c473336f36a9a3aec65f4b05a5 315 Gene3D G3DSA:3.40.50.2300 25 149 6.1E-24 T 14-09-2016 AMK01_RS17475 18059447d633072a705e5d361ce15832 487 PANTHER PTHR22773:SF46 1 482 1.5E-142 T 14-09-2016 AMK01_RS17475 18059447d633072a705e5d361ce15832 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 1.1E-17 T 14-09-2016 AMK01_RS17475 18059447d633072a705e5d361ce15832 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 1.1E-17 T 14-09-2016 AMK01_RS17475 18059447d633072a705e5d361ce15832 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 1.1E-17 T 14-09-2016 AMK01_RS17475 18059447d633072a705e5d361ce15832 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 1.1E-17 T 14-09-2016 AMK01_RS17475 18059447d633072a705e5d361ce15832 487 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 72 118 1.8E-8 T 14-09-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMK01_RS17475 18059447d633072a705e5d361ce15832 487 PANTHER PTHR22773 1 482 1.5E-142 T 14-09-2016 AMK01_RS17475 18059447d633072a705e5d361ce15832 487 Pfam PF00361 Proton-conducting membrane transporter 132 425 4.9E-51 T 14-09-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 AMK01_RS13820 135f1ee492dcf17d7a43613cc29d1169 656 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 409 591 5.6E-30 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13820 135f1ee492dcf17d7a43613cc29d1169 656 PANTHER PTHR11920 371 631 1.8E-69 T 14-09-2016 AMK01_RS13820 135f1ee492dcf17d7a43613cc29d1169 656 Gene3D G3DSA:3.30.70.1230 407 601 1.6E-47 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13820 135f1ee492dcf17d7a43613cc29d1169 656 SMART SM00044 370 581 2.3E-14 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13820 135f1ee492dcf17d7a43613cc29d1169 656 Pfam PF05226 CHASE2 domain 28 309 6.3E-38 T 14-09-2016 IPR007890 CHASE2 AMK01_RS13820 135f1ee492dcf17d7a43613cc29d1169 656 SUPERFAMILY SSF55073 404 600 2.35E-57 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS13820 135f1ee492dcf17d7a43613cc29d1169 656 PANTHER PTHR11920:SF341 371 631 1.8E-69 T 14-09-2016 AMK01_RS13820 135f1ee492dcf17d7a43613cc29d1169 656 SMART SM01080 40 314 1.4E-60 T 14-09-2016 IPR007890 CHASE2 AMK01_RS03230 435e5f565261ba634b38873344dde103 319 SUPERFAMILY SSF161098 94 303 5.07E-14 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03230 435e5f565261ba634b38873344dde103 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 317 4.2E-42 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03230 435e5f565261ba634b38873344dde103 319 PANTHER PTHR30465:SF24 1 318 2.0E-116 T 14-09-2016 AMK01_RS03230 435e5f565261ba634b38873344dde103 319 Gene3D G3DSA:1.10.3720.10 93 310 1.6E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03230 435e5f565261ba634b38873344dde103 319 PANTHER PTHR30465 1 318 2.0E-116 T 14-09-2016 AMK01_RS30275 120f8724b7833a76cab6c6014e45beaf 168 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 77 168 4.8E-20 T 14-09-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS30275 120f8724b7833a76cab6c6014e45beaf 168 SUPERFAMILY SSF52540 23 167 1.3E-33 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS30275 120f8724b7833a76cab6c6014e45beaf 168 PANTHER PTHR15184:SF9 3 168 5.7E-50 T 14-09-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK01_RS30275 120f8724b7833a76cab6c6014e45beaf 168 Gene3D G3DSA:3.40.50.300 23 168 1.5E-31 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS30275 120f8724b7833a76cab6c6014e45beaf 168 PANTHER PTHR15184 3 168 5.7E-50 T 14-09-2016 AMK01_RS15565 fee038f5c83be4bb4b964014e89b5a73 306 PANTHER PTHR33608:SF2 33 300 1.4E-51 T 14-09-2016 AMK01_RS15565 fee038f5c83be4bb4b964014e89b5a73 306 Pfam PF01882 Protein of unknown function DUF58 54 140 1.3E-17 T 14-09-2016 IPR002881 Domain of unknown function DUF58 AMK01_RS15565 fee038f5c83be4bb4b964014e89b5a73 306 PANTHER PTHR33608 33 300 1.4E-51 T 14-09-2016 AMK01_RS16955 0c3decca617dce888cd24b91b6f5a383 396 PANTHER PTHR30469:SF15 11 396 1.1E-54 T 14-09-2016 AMK01_RS16955 0c3decca617dce888cd24b91b6f5a383 396 Gene3D G3DSA:1.20.1600.10 99 204 9.0E-6 T 14-09-2016 AMK01_RS16955 0c3decca617dce888cd24b91b6f5a383 396 PANTHER PTHR30469 11 396 1.1E-54 T 14-09-2016 AMK01_RS16955 0c3decca617dce888cd24b91b6f5a383 396 Gene3D G3DSA:2.40.50.100 66 98 1.8E-8 T 14-09-2016 AMK01_RS16955 0c3decca617dce888cd24b91b6f5a383 396 Gene3D G3DSA:2.40.50.100 205 234 1.8E-8 T 14-09-2016 AMK01_RS16955 0c3decca617dce888cd24b91b6f5a383 396 SUPERFAMILY SSF111369 58 311 3.14E-11 T 14-09-2016 AMK01_RS16955 0c3decca617dce888cd24b91b6f5a383 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 386 3.3E-40 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS16955 0c3decca617dce888cd24b91b6f5a383 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 306 2.1E-15 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS03170 ee2422d1ff8f75386e581883fa03a33f 165 Pfam PF07681 DoxX 35 128 4.2E-18 T 14-09-2016 IPR032808 DoxX family AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 185 5.2E-44 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 PANTHER PTHR11071 37 166 4.2E-35 T 14-09-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 1.7E-11 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 1.7E-11 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 147 1.7E-11 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 1.7E-11 T 14-09-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 SUPERFAMILY SSF50891 31 187 4.68E-45 T 14-09-2016 IPR029000 Cyclophilin-like domain AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 Gene3D G3DSA:2.40.100.10 19 187 3.0E-43 T 14-09-2016 IPR029000 Cyclophilin-like domain AMK01_RS10850 96b6f65c6fe0e32ba1352e3d8f3b7a8f 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 14-09-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMK01_RS07565 73774086f52588a525ef37500f45a1a1 196 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 188 9.9E-42 T 14-09-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 AMK01_RS07565 73774086f52588a525ef37500f45a1a1 196 SUPERFAMILY SSF55811 13 192 1.15E-43 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS07565 73774086f52588a525ef37500f45a1a1 196 PANTHER PTHR11839 1 196 4.6E-39 T 14-09-2016 AMK01_RS07565 73774086f52588a525ef37500f45a1a1 196 Gene3D G3DSA:3.90.79.10 7 193 7.4E-53 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS07565 73774086f52588a525ef37500f45a1a1 196 Pfam PF00293 NUDIX domain 47 172 1.3E-14 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 SUPERFAMILY SSF56053 83 177 2.16E-36 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 Gene3D G3DSA:3.90.930.12 2 82 4.1E-25 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 PANTHER PTHR11655 1 176 2.4E-77 T 14-09-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 Gene3D G3DSA:3.90.930.12 83 177 3.8E-40 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 SUPERFAMILY SSF56053 1 82 2.75E-21 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.813 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.2E-28 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.2E-28 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.2E-28 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 Pfam PF00347 Ribosomal protein L6 11 82 2.2E-13 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 Pfam PF00347 Ribosomal protein L6 91 164 1.2E-19 T 14-09-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.0E-70 T 14-09-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-09-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 PIRSF PIRSF002162 1 177 3.3E-46 T 14-09-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK01_RS08525 b8e5eaf4e2eb317d20502d948801b46e 177 PANTHER PTHR11655:SF14 1 176 2.4E-77 T 14-09-2016 AMK01_RS07490 6aaeb5a0966168ea805abe07d1d26f0f 169 PANTHER PTHR37302:SF2 1 169 5.7E-23 T 14-09-2016 AMK01_RS07490 6aaeb5a0966168ea805abe07d1d26f0f 169 Gene3D G3DSA:1.20.120.450 1 162 6.1E-38 T 14-09-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase AMK01_RS07490 6aaeb5a0966168ea805abe07d1d26f0f 169 Pfam PF05163 DinB family 1 166 3.5E-39 T 14-09-2016 IPR007837 DNA damage-inducible protein DinB AMK01_RS07490 6aaeb5a0966168ea805abe07d1d26f0f 169 PANTHER PTHR37302 1 169 5.7E-23 T 14-09-2016 AMK01_RS07490 6aaeb5a0966168ea805abe07d1d26f0f 169 SUPERFAMILY SSF109854 3 145 3.97E-36 T 14-09-2016 AMK01_RS03970 718291888ca9119d7211c7a9c6d57909 225 SUPERFAMILY SSF53448 5 205 3.99E-31 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS03970 718291888ca9119d7211c7a9c6d57909 225 PANTHER PTHR21485 6 123 2.2E-23 T 14-09-2016 AMK01_RS03970 718291888ca9119d7211c7a9c6d57909 225 Pfam PF02348 Cytidylyltransferase 5 197 8.6E-32 T 14-09-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK01_RS03970 718291888ca9119d7211c7a9c6d57909 225 Gene3D G3DSA:3.90.550.10 4 206 2.0E-35 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 PANTHER PTHR20854 3 240 3.7E-46 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 Gene3D G3DSA:3.40.190.80 183 263 1.3E-17 T 14-09-2016 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 Gene3D G3DSA:3.30.540.10 8 158 2.2E-39 T 14-09-2016 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 Pfam PF00459 Inositol monophosphatase family 18 243 4.0E-38 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 PANTHER PTHR20854:SF38 3 240 3.7E-46 T 14-09-2016 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 14-09-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 SUPERFAMILY SSF56655 9 262 5.1E-61 T 14-09-2016 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 9.0E-11 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 9.0E-11 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 9.0E-11 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS04300 92a766029d7396cf9ffef9ec863db024 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 9.0E-11 T 14-09-2016 IPR000760 Inositol monophosphatase GO:0046854 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 491 1.6E-124 T 14-09-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 Gene3D G3DSA:1.20.1250.20 264 425 2.4E-16 T 14-09-2016 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 PANTHER PTHR23501:SF69 11 502 1.6E-181 T 14-09-2016 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 Pfam PF07690 Major Facilitator Superfamily 22 414 9.7E-59 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 207 225 1.1E-6 T 14-09-2016 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 405 424 1.1E-6 T 14-09-2016 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 1.1E-6 T 14-09-2016 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 1.1E-6 T 14-09-2016 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 1.1E-6 T 14-09-2016 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 PANTHER PTHR23501 11 502 1.6E-181 T 14-09-2016 AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 SUPERFAMILY SSF103473 253 425 1.7E-70 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 SUPERFAMILY SSF103473 9 204 1.7E-70 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS17255 1412b6a277356e56054d72fc454e075c 513 Gene3D G3DSA:1.20.1250.20 21 200 3.6E-35 T 14-09-2016 AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 131 653 2.0E-175 T 14-09-2016 AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 Pfam PF00912 Transglycosylase 127 293 4.4E-58 T 14-09-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 SUPERFAMILY SSF56601 275 297 6.52E-111 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 SUPERFAMILY SSF56601 324 666 6.52E-111 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 Pfam PF00905 Penicillin binding protein transpeptidase domain 381 648 1.4E-30 T 14-09-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 SUPERFAMILY SSF53955 110 315 1.94E-68 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 PANTHER PTHR32282:SF5 42 661 5.6E-187 T 14-09-2016 AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 Gene3D G3DSA:3.40.710.10 295 675 1.7E-107 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 Gene3D G3DSA:1.10.3810.10 121 294 1.2E-65 T 14-09-2016 AMK01_RS06475 e10998b8f5e7d7fb2fd0b91e73a5f0fc 724 PANTHER PTHR32282 42 661 5.6E-187 T 14-09-2016 AMK01_RS02230 cede3c599c696e111ef39fc428588d43 191 PANTHER PTHR33231 1 188 1.1E-26 T 14-09-2016 AMK01_RS02230 cede3c599c696e111ef39fc428588d43 191 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 8.9E-18 T 14-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK01_RS02230 cede3c599c696e111ef39fc428588d43 191 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 2.3E-16 T 14-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK01_RS02230 cede3c599c696e111ef39fc428588d43 191 SUPERFAMILY SSF69754 1 102 9.55E-26 T 14-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK01_RS02230 cede3c599c696e111ef39fc428588d43 191 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 129 182 7.2E-14 T 14-09-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal AMK01_RS02230 cede3c599c696e111ef39fc428588d43 191 Gene3D G3DSA:3.30.160.100 1 97 2.7E-23 T 14-09-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK01_RS14350 0c2ae35a83eab8255379f055c2e78b7b 318 PIRSF PIRSF005651 1 296 5.5E-73 T 14-09-2016 IPR010200 HflC GO:0016021|GO:0052547 AMK01_RS14350 0c2ae35a83eab8255379f055c2e78b7b 318 SUPERFAMILY SSF117892 61 194 9.55E-16 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS14350 0c2ae35a83eab8255379f055c2e78b7b 318 Pfam PF01145 SPFH domain / Band 7 family 25 203 6.8E-23 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS14350 0c2ae35a83eab8255379f055c2e78b7b 318 PANTHER PTHR10264:SF80 7 299 4.5E-58 T 14-09-2016 AMK01_RS14350 0c2ae35a83eab8255379f055c2e78b7b 318 PANTHER PTHR10264 7 299 4.5E-58 T 14-09-2016 IPR001972 Stomatin family GO:0016020 AMK01_RS14350 0c2ae35a83eab8255379f055c2e78b7b 318 SMART SM00244 21 188 1.9E-17 T 14-09-2016 IPR001107 Band 7 domain AMK01_RS03560 885ef7276b60442b3e8a7ff8922ade3f 303 SUPERFAMILY SSF64518 1 302 1.7E-64 T 14-09-2016 AMK01_RS03560 885ef7276b60442b3e8a7ff8922ade3f 303 Pfam PF00700 Bacterial flagellin C-terminal helical region 218 300 6.4E-17 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03560 885ef7276b60442b3e8a7ff8922ade3f 303 Gene3D G3DSA:1.20.1330.10 204 253 4.3E-15 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03560 885ef7276b60442b3e8a7ff8922ade3f 303 Gene3D G3DSA:1.20.1330.10 53 169 4.3E-15 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03560 885ef7276b60442b3e8a7ff8922ade3f 303 PRINTS PR00207 Flagellin signature 36 53 4.7E-7 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03560 885ef7276b60442b3e8a7ff8922ade3f 303 PRINTS PR00207 Flagellin signature 107 130 4.7E-7 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03560 885ef7276b60442b3e8a7ff8922ade3f 303 PRINTS PR00207 Flagellin signature 75 94 4.7E-7 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03560 885ef7276b60442b3e8a7ff8922ade3f 303 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 137 1.2E-30 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS11715 3b9396df14e18dbc2709eb78441bea5f 77 SUPERFAMILY SSF82657 2 77 3.14E-23 T 14-09-2016 IPR002634 BolA protein AMK01_RS11715 3b9396df14e18dbc2709eb78441bea5f 77 PANTHER PTHR12735 6 77 3.9E-15 T 14-09-2016 AMK01_RS11715 3b9396df14e18dbc2709eb78441bea5f 77 Gene3D G3DSA:3.30.300.90 2 77 1.9E-21 T 14-09-2016 IPR002634 BolA protein AMK01_RS11715 3b9396df14e18dbc2709eb78441bea5f 77 Pfam PF01722 BolA-like protein 27 77 2.0E-15 T 14-09-2016 IPR002634 BolA protein AMK01_RS11715 3b9396df14e18dbc2709eb78441bea5f 77 PIRSF PIRSF003113 1 77 4.0E-19 T 14-09-2016 IPR002634 BolA protein AMK01_RS11265 41c37aca13dd2314a6c716ba0653880a 175 Gene3D G3DSA:3.30.70.1280 1 83 6.4E-16 T 14-09-2016 AMK01_RS11265 41c37aca13dd2314a6c716ba0653880a 175 SUPERFAMILY SSF160379 1 173 2.22E-37 T 14-09-2016 AMK01_RS11265 41c37aca13dd2314a6c716ba0653880a 175 PIRSF PIRSF008502 1 175 5.4E-37 T 14-09-2016 IPR012545 Protein of unknown function DUF1697 AMK01_RS11265 41c37aca13dd2314a6c716ba0653880a 175 PANTHER PTHR36439 1 175 2.0E-15 T 14-09-2016 AMK01_RS11265 41c37aca13dd2314a6c716ba0653880a 175 PANTHER PTHR36439:SF1 1 175 2.0E-15 T 14-09-2016 AMK01_RS11265 41c37aca13dd2314a6c716ba0653880a 175 Pfam PF08002 Protein of unknown function (DUF1697) 1 135 8.4E-28 T 14-09-2016 IPR012545 Protein of unknown function DUF1697 AMK01_RS02985 f3e637f6a962d7deecc2b93c693e5dee 146 SUPERFAMILY SSF54427 9 129 3.68E-20 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS02985 f3e637f6a962d7deecc2b93c693e5dee 146 Pfam PF13474 SnoaL-like domain 22 132 5.5E-14 T 14-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK01_RS02985 f3e637f6a962d7deecc2b93c693e5dee 146 Gene3D G3DSA:3.10.450.50 8 129 2.2E-27 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS07410 5ff1bd23e22fde1797e40d763b77911b 295 Pfam PF03755 YicC-like family, N-terminal region 3 158 4.4E-34 T 14-09-2016 IPR013527 YicC-like, N-terminal AMK01_RS07410 5ff1bd23e22fde1797e40d763b77911b 295 Pfam PF08340 Domain of unknown function (DUF1732) 212 295 6.1E-32 T 14-09-2016 IPR013551 Domain of unknown function DUF1732 AMK01_RS07410 5ff1bd23e22fde1797e40d763b77911b 295 PANTHER PTHR30636 2 295 3.4E-78 T 14-09-2016 AMK01_RS07410 5ff1bd23e22fde1797e40d763b77911b 295 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 3 295 2.4E-62 T 14-09-2016 IPR005229 Conserved hypothetical protein CHP00255 AMK01_RS03840 527a991cee61150802501857d4cff929 103 PANTHER PTHR33336 1 103 1.1E-20 T 14-09-2016 AMK01_RS03840 527a991cee61150802501857d4cff929 103 PANTHER PTHR33336:SF3 1 103 1.1E-20 T 14-09-2016 AMK01_RS03840 527a991cee61150802501857d4cff929 103 Gene3D G3DSA:3.30.70.900 1 98 4.0E-25 T 14-09-2016 AMK01_RS03840 527a991cee61150802501857d4cff929 103 SUPERFAMILY SSF54909 5 94 4.13E-20 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS03840 527a991cee61150802501857d4cff929 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 80 1.2E-14 T 14-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 SUPERFAMILY SSF51419 23 240 2.8E-54 T 14-09-2016 IPR029066 PLP-binding barrel AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PANTHER PTHR30511:SF0 15 387 5.1E-83 T 14-09-2016 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 Gene3D G3DSA:2.40.37.10 228 386 8.9E-49 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 Pfam PF00842 Alanine racemase, C-terminal domain 247 383 1.0E-33 T 14-09-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 SUPERFAMILY SSF50621 244 385 5.93E-39 T 14-09-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PANTHER PTHR30511 15 387 5.1E-83 T 14-09-2016 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 Gene3D G3DSA:3.20.20.10 25 227 3.6E-54 T 14-09-2016 IPR029066 PLP-binding barrel AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 SMART SM01005 247 384 6.7E-56 T 14-09-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 Hamap MF_01201 Alanine racemase. 16 384 28.574 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 Pfam PF01168 Alanine racemase, N-terminal domain 23 234 7.0E-51 T 14-09-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 TIGRFAM TIGR00492 alr: alanine racemase 22 384 2.6E-68 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PRINTS PR00992 Alanine racemase signature 41 57 9.0E-32 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PRINTS PR00992 Alanine racemase signature 209 236 9.0E-32 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PRINTS PR00992 Alanine racemase signature 137 149 9.0E-32 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PRINTS PR00992 Alanine racemase signature 171 182 9.0E-32 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PRINTS PR00992 Alanine racemase signature 77 95 9.0E-32 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PRINTS PR00992 Alanine racemase signature 280 295 9.0E-32 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS07330 b7f5508913e2c4dfaa19b982442a3380 387 PRINTS PR00992 Alanine racemase signature 263 278 9.0E-32 T 14-09-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS15955 e911587b1da6b95eb389f281c7be294b 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 94 4.0E-8 T 14-09-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK01_RS06135 0cb923a81b981fd97051f9d259459f2e 295 Gene3D G3DSA:3.30.470.10 12 118 1.1E-16 T 14-09-2016 AMK01_RS06135 0cb923a81b981fd97051f9d259459f2e 295 Gene3D G3DSA:3.20.10.10 132 289 3.5E-41 T 14-09-2016 AMK01_RS06135 0cb923a81b981fd97051f9d259459f2e 295 ProSitePatterns PS00770 Aminotransferases class-IV signature. 191 220 - T 14-09-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS06135 0cb923a81b981fd97051f9d259459f2e 295 PANTHER PTHR11825 15 294 6.1E-46 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS06135 0cb923a81b981fd97051f9d259459f2e 295 Pfam PF01063 Amino-transferase class IV 40 264 8.3E-39 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS06135 0cb923a81b981fd97051f9d259459f2e 295 SUPERFAMILY SSF56752 10 293 2.22E-72 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS12145 41ec05ab788d1fc6524d999d099c6595 191 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 95 153 1.9E-18 T 14-09-2016 IPR018637 Domain of unknown function DUF2059 AMK01_RS18925 9cc6861fe9eab4e4f910934b4dd63234 57 PIRSF PIRSF036466 1 55 1.0E-19 T 14-09-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMK01_RS18925 9cc6861fe9eab4e4f910934b4dd63234 57 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.3E-13 T 14-09-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMK01_RS18925 9cc6861fe9eab4e4f910934b4dd63234 57 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 56 18.907 T 14-09-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 AMK01_RS07995 73575b9c36e6d55e306593a5896d6fa5 103 Pfam PF06169 Protein of unknown function (DUF982) 10 81 1.8E-24 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 79 23.247 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 PANTHER PTHR10744 1 74 1.2E-34 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 5.5E-35 T 14-09-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 7.0E-36 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 Gene3D G3DSA:2.40.50.140 1 75 2.1E-33 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 SUPERFAMILY SSF50249 3 75 1.88E-30 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 5.8E-11 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 5.8E-11 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 5.8E-11 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08495 17ff0d4267c4db99a8cbc42e965d8a7e 79 Pfam PF00366 Ribosomal protein S17 8 74 5.0E-32 T 14-09-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS06090 45f1d58f9cfeffa892d96aa61069c58e 130 Pfam PF06078 Bacterial protein of unknown function (DUF937) 4 94 1.9E-5 T 14-09-2016 IPR009282 Protein of unknown function DUF937 AMK01_RS00250 d1e34bf78d02f112c28bfbb52efbd110 175 SUPERFAMILY SSF56235 1 171 4.27E-57 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS00250 d1e34bf78d02f112c28bfbb52efbd110 175 Gene3D G3DSA:3.60.20.10 2 172 1.8E-84 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS00250 d1e34bf78d02f112c28bfbb52efbd110 175 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 170 2.7E-83 T 14-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMK01_RS00250 d1e34bf78d02f112c28bfbb52efbd110 175 PANTHER PTHR32194 1 175 3.2E-118 T 14-09-2016 AMK01_RS00250 d1e34bf78d02f112c28bfbb52efbd110 175 PIRSF PIRSF039093 1 174 3.2E-82 T 14-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMK01_RS00250 d1e34bf78d02f112c28bfbb52efbd110 175 Pfam PF00227 Proteasome subunit 2 169 1.3E-22 T 14-09-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 AMK01_RS00250 d1e34bf78d02f112c28bfbb52efbd110 175 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 171 41.225 T 14-09-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMK01_RS01900 e78d45f4c7f8771bb8f103554a687f8d 412 PANTHER PTHR23501 6 411 6.7E-143 T 14-09-2016 AMK01_RS01900 e78d45f4c7f8771bb8f103554a687f8d 412 Pfam PF07690 Major Facilitator Superfamily 33 252 2.7E-27 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS01900 e78d45f4c7f8771bb8f103554a687f8d 412 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 99 - T 14-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMK01_RS01900 e78d45f4c7f8771bb8f103554a687f8d 412 SUPERFAMILY SSF103473 22 406 3.92E-55 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS01900 e78d45f4c7f8771bb8f103554a687f8d 412 Gene3D G3DSA:1.20.1250.20 229 407 3.9E-13 T 14-09-2016 AMK01_RS01900 e78d45f4c7f8771bb8f103554a687f8d 412 Gene3D G3DSA:1.20.1250.20 28 208 1.2E-29 T 14-09-2016 AMK01_RS01900 e78d45f4c7f8771bb8f103554a687f8d 412 PANTHER PTHR23501:SF11 6 411 6.7E-143 T 14-09-2016 AMK01_RS18495 1ecb28b82b7599e222f599b160877cce 348 Gene3D G3DSA:3.40.190.10 268 341 4.4E-51 T 14-09-2016 AMK01_RS18495 1ecb28b82b7599e222f599b160877cce 348 Gene3D G3DSA:3.40.190.10 19 126 4.4E-51 T 14-09-2016 AMK01_RS18495 1ecb28b82b7599e222f599b160877cce 348 PANTHER PTHR30006:SF10 29 343 8.1E-51 T 14-09-2016 AMK01_RS18495 1ecb28b82b7599e222f599b160877cce 348 Pfam PF13416 Bacterial extracellular solute-binding protein 46 301 6.2E-12 T 14-09-2016 AMK01_RS18495 1ecb28b82b7599e222f599b160877cce 348 SUPERFAMILY SSF53850 29 343 5.93E-39 T 14-09-2016 AMK01_RS18495 1ecb28b82b7599e222f599b160877cce 348 PANTHER PTHR30006 29 343 8.1E-51 T 14-09-2016 AMK01_RS18495 1ecb28b82b7599e222f599b160877cce 348 Gene3D G3DSA:3.40.190.10 127 267 1.3E-53 T 14-09-2016 AMK01_RS19240 c3b3aa28a6741b917c553b7dd8b61e44 198 PANTHER PTHR11019:SF112 112 145 9.2E-55 T 14-09-2016 AMK01_RS19240 c3b3aa28a6741b917c553b7dd8b61e44 198 PANTHER PTHR11019 4 94 9.2E-55 T 14-09-2016 AMK01_RS19240 c3b3aa28a6741b917c553b7dd8b61e44 198 PANTHER PTHR11019 112 145 9.2E-55 T 14-09-2016 AMK01_RS19240 c3b3aa28a6741b917c553b7dd8b61e44 198 SUPERFAMILY SSF52317 5 187 2.64E-52 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS19240 c3b3aa28a6741b917c553b7dd8b61e44 198 Gene3D G3DSA:3.40.50.880 4 187 2.2E-58 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS19240 c3b3aa28a6741b917c553b7dd8b61e44 198 PANTHER PTHR11019:SF112 4 94 9.2E-55 T 14-09-2016 AMK01_RS19240 c3b3aa28a6741b917c553b7dd8b61e44 198 Pfam PF01965 DJ-1/PfpI family 5 185 9.2E-52 T 14-09-2016 IPR002818 DJ-1/PfpI AMK01_RS19240 c3b3aa28a6741b917c553b7dd8b61e44 198 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 5.6E-60 T 14-09-2016 IPR006286 Peptidase C56, PfpI GO:0016798 AMK01_RS08090 a40eb888e88c18dc93e1f9ffb9fd58ac 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 19.94 T 14-09-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AMK01_RS08090 a40eb888e88c18dc93e1f9ffb9fd58ac 121 PANTHER PTHR11058:SF10 1 121 6.5E-70 T 14-09-2016 AMK01_RS08090 a40eb888e88c18dc93e1f9ffb9fd58ac 121 PANTHER PTHR11058 1 121 6.5E-70 T 14-09-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AMK01_RS08090 a40eb888e88c18dc93e1f9ffb9fd58ac 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 25 120 1.8E-37 T 14-09-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 Pfam PF00171 Aldehyde dehydrogenase family 28 487 1.7E-173 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 39 486 1.7E-217 T 14-09-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 Gene3D G3DSA:3.40.605.10 23 279 2.7E-104 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 PANTHER PTHR11699 1 490 2.9E-288 T 14-09-2016 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 292 303 - T 14-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 PANTHER PTHR11699:SF49 1 490 2.9E-288 T 14-09-2016 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 14-09-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 Gene3D G3DSA:3.40.309.10 280 468 8.8E-70 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS00475 26e461aa7f18a3c99b7ed15618305014 493 SUPERFAMILY SSF53720 13 491 8.12E-174 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS14040 4a620f4e2c1fcb461fccfa156e2b2a96 145 Pfam PF09990 Predicted membrane protein (DUF2231) 46 132 5.1E-8 T 14-09-2016 IPR019251 Domain of unknown function DUF2231, transmembrane AMK01_RS14040 4a620f4e2c1fcb461fccfa156e2b2a96 145 PIRSF PIRSF029509 1 143 3.9E-38 T 14-09-2016 IPR016923 Uncharacterised conserved protein UCP029509, membrane AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 Pfam PF02563 Polysaccharide biosynthesis/export protein 88 175 1.6E-11 T 14-09-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 PANTHER PTHR33619 92 110 1.1E-29 T 14-09-2016 AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 PANTHER PTHR33619 128 402 1.1E-29 T 14-09-2016 AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 Pfam PF10531 SLBB domain 283 311 0.0072 T 14-09-2016 IPR019554 Soluble ligand binding domain AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 Pfam PF10531 SLBB domain 183 231 3.3E-6 T 14-09-2016 IPR019554 Soluble ligand binding domain AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 PANTHER PTHR33619:SF3 92 110 1.1E-29 T 14-09-2016 AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 PANTHER PTHR33619:SF3 128 402 1.1E-29 T 14-09-2016 AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 Gene3D G3DSA:3.30.1950.10 95 171 3.0E-15 T 14-09-2016 AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 Gene3D G3DSA:3.10.560.10 172 252 4.1E-19 T 14-09-2016 AMK01_RS16685 8e087922ccc171c9dcc1a749e2ee3302 403 Gene3D G3DSA:3.10.560.10 253 364 1.6E-26 T 14-09-2016 AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 14-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 Gene3D G3DSA:1.10.10.10 7 59 9.3E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 SUPERFAMILY SSF54909 69 143 1.23E-14 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 PANTHER PTHR30154:SF14 1 152 5.7E-76 T 14-09-2016 AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.2E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.2E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.2E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 Gene3D G3DSA:3.30.70.920 61 129 6.0E-18 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 SMART SM00344 8 114 1.0E-36 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 PANTHER PTHR30154 1 152 5.7E-76 T 14-09-2016 AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 Pfam PF01037 Lrp/AsnC ligand binding domain 74 136 9.2E-14 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 SUPERFAMILY SSF46785 8 68 1.7E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01825 8f6e1a535b3c7667be705aa71fe9f1b2 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 55 1.0E-16 T 14-09-2016 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.273 T 14-09-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 5.1E-39 T 14-09-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-37 T 14-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-35 T 14-09-2016 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 Gene3D G3DSA:1.10.287.10 3 89 5.5E-40 T 14-09-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 SMART SM01387 8 88 9.2E-53 T 14-09-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 PANTHER PTHR23321 1 89 6.5E-44 T 14-09-2016 AMK01_RS00710 3ec01c59465e3d7069539b69ff7f65ec 89 SUPERFAMILY SSF47060 3 89 8.54E-36 T 14-09-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AMK01_RS05790 5c8d1ddfdae9d274415da2ff89be5bf0 213 SUPERFAMILY SSF52833 161 192 6.35E-17 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05790 5c8d1ddfdae9d274415da2ff89be5bf0 213 SUPERFAMILY SSF52833 10 116 6.35E-17 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05790 5c8d1ddfdae9d274415da2ff89be5bf0 213 Pfam PF00578 AhpC/TSA family 13 183 6.0E-9 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS05790 5c8d1ddfdae9d274415da2ff89be5bf0 213 Gene3D G3DSA:3.40.30.10 11 115 4.1E-19 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05790 5c8d1ddfdae9d274415da2ff89be5bf0 213 Gene3D G3DSA:3.40.30.10 168 189 4.1E-19 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 Gene3D G3DSA:3.40.50.720 1 259 1.3E-86 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 SUPERFAMILY SSF51735 6 259 4.35E-82 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PANTHER PTHR24322 155 186 2.8E-52 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PANTHER PTHR24322 11 139 2.8E-52 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.1E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.1E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.1E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 8.1E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.1E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.1E-42 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.3E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.3E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.3E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 257 4.6E-62 T 14-09-2016 AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PANTHER PTHR24322:SF328 155 186 2.8E-52 T 14-09-2016 AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 PANTHER PTHR24322:SF328 11 139 2.8E-52 T 14-09-2016 AMK01_RS12275 eefeb804f4563f92a064d078c0c63470 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-09-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK01_RS17470 0a39a87a8067be9ffcc9d3449cc9527d 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 95 4.1E-24 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK01_RS17470 0a39a87a8067be9ffcc9d3449cc9527d 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 20.094 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK01_RS17470 0a39a87a8067be9ffcc9d3449cc9527d 100 PANTHER PTHR11434 3 100 1.8E-35 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 Pfam PF00248 Aldo/keto reductase family 17 318 3.0E-69 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 Gene3D G3DSA:3.20.20.100 1 323 4.3E-108 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 110 120 1.6E-17 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 260 272 1.6E-17 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 161 180 1.6E-17 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 206 212 1.6E-17 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 234 246 1.6E-17 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 273 286 1.6E-17 T 14-09-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 PANTHER PTHR11732 1 329 5.9E-140 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS09940 8ca678666d1b479cdd87c4a6b96ed3f3 329 SUPERFAMILY SSF51430 1 321 1.44E-98 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS10410 d7c35692737c87f9d9de78f2a195c9ab 182 SUPERFAMILY SSF54427 51 173 2.72E-22 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS10410 d7c35692737c87f9d9de78f2a195c9ab 182 Pfam PF12680 SnoaL-like domain 56 161 5.6E-11 T 14-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK01_RS10410 d7c35692737c87f9d9de78f2a195c9ab 182 Gene3D G3DSA:3.10.450.50 47 177 6.0E-26 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS07930 5b1fbf1babd0929b287156127328a52f 320 ProSitePatterns PS01053 Arginase family signature. 237 258 - T 14-09-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 AMK01_RS07930 5b1fbf1babd0929b287156127328a52f 320 Gene3D G3DSA:3.40.800.10 17 313 2.2E-93 T 14-09-2016 IPR023696 Ureohydrolase domain AMK01_RS07930 5b1fbf1babd0929b287156127328a52f 320 SUPERFAMILY SSF52768 22 312 1.53E-87 T 14-09-2016 AMK01_RS07930 5b1fbf1babd0929b287156127328a52f 320 PIRSF PIRSF036979 23 313 2.2E-80 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS07930 5b1fbf1babd0929b287156127328a52f 320 TIGRFAM TIGR01230 agmatinase: agmatinase 39 307 4.5E-68 T 14-09-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 AMK01_RS07930 5b1fbf1babd0929b287156127328a52f 320 PANTHER PTHR11358:SF26 2 306 4.5E-74 T 14-09-2016 AMK01_RS07930 5b1fbf1babd0929b287156127328a52f 320 Pfam PF00491 Arginase family 43 306 5.6E-82 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS07930 5b1fbf1babd0929b287156127328a52f 320 PANTHER PTHR11358 2 306 4.5E-74 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS11605 157b851e6913c654074b02bb494ba6bd 140 Pfam PF00293 NUDIX domain 11 130 1.2E-21 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS11605 157b851e6913c654074b02bb494ba6bd 140 PANTHER PTHR22769 9 120 1.6E-24 T 14-09-2016 AMK01_RS11605 157b851e6913c654074b02bb494ba6bd 140 PRINTS PR00502 NUDIX hydrolase family signature 51 66 5.0E-5 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS11605 157b851e6913c654074b02bb494ba6bd 140 PRINTS PR00502 NUDIX hydrolase family signature 37 51 5.0E-5 T 14-09-2016 IPR020476 NUDIX hydrolase AMK01_RS11605 157b851e6913c654074b02bb494ba6bd 140 Gene3D G3DSA:3.90.79.10 11 127 9.5E-32 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS11605 157b851e6913c654074b02bb494ba6bd 140 SUPERFAMILY SSF55811 9 134 8.67E-32 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS11605 157b851e6913c654074b02bb494ba6bd 140 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 14-09-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 Pfam PF00072 Response regulator receiver domain 446 559 2.5E-19 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 Pfam PF08448 PAS fold 168 255 1.6E-12 T 14-09-2016 IPR013656 PAS fold-4 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 SMART SM00448 444 559 9.2E-23 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 165 270 1.0E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 PANTHER PTHR24423 443 564 4.5E-35 T 14-09-2016 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 PANTHER PTHR24423 59 71 4.5E-35 T 14-09-2016 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 SMART SM00091 26 93 25.0 T 14-09-2016 IPR000014 PAS domain AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 SMART SM00091 162 228 9.2E-7 T 14-09-2016 IPR000014 PAS domain AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 Gene3D G3DSA:3.40.50.2300 442 565 2.2E-33 T 14-09-2016 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 Gene3D G3DSA:3.30.450.20 25 146 1.2E-6 T 14-09-2016 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 Gene3D G3DSA:3.30.450.20 161 270 1.5E-15 T 14-09-2016 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 SUPERFAMILY SSF55785 144 270 1.45E-15 T 14-09-2016 IPR000014 PAS domain AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 Pfam PF12860 PAS fold 33 152 8.8E-9 T 14-09-2016 AMK01_RS04335 27fbdd67944dc37346477247c71f85cf 575 SUPERFAMILY SSF52172 442 564 5.55E-32 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 PIRSF PIRSF004846 1 263 8.4E-67 T 14-09-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 Gene3D G3DSA:3.40.190.10 113 223 4.3E-40 T 14-09-2016 AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 Gene3D G3DSA:3.40.190.10 224 259 1.0E-15 T 14-09-2016 AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 Gene3D G3DSA:3.40.190.10 11 106 1.0E-15 T 14-09-2016 AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 PANTHER PTHR30632 10 259 1.1E-66 T 14-09-2016 AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 PANTHER PTHR30632:SF0 10 259 1.1E-66 T 14-09-2016 AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 Pfam PF13531 Bacterial extracellular solute-binding protein 35 259 5.1E-46 T 14-09-2016 AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 SUPERFAMILY SSF53850 33 260 3.72E-65 T 14-09-2016 AMK01_RS20915 107fc0b5b097d126c6bbc301a04e3828 263 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 40 256 1.7E-61 T 14-09-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AMK01_RS01810 1e221555143ab4227703fb98947aedd3 320 TIGRFAM TIGR01139 cysK: cysteine synthase A 14 315 1.4E-133 T 14-09-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AMK01_RS01810 1e221555143ab4227703fb98947aedd3 320 TIGRFAM TIGR01136 cysKM: cysteine synthase 14 315 5.6E-129 T 14-09-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AMK01_RS01810 1e221555143ab4227703fb98947aedd3 320 PANTHER PTHR10314:SF110 7 316 3.3E-169 T 14-09-2016 AMK01_RS01810 1e221555143ab4227703fb98947aedd3 320 PANTHER PTHR10314 7 316 3.3E-169 T 14-09-2016 AMK01_RS01810 1e221555143ab4227703fb98947aedd3 320 SUPERFAMILY SSF53686 9 315 2.62E-101 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS01810 1e221555143ab4227703fb98947aedd3 320 Gene3D G3DSA:3.40.50.1100 47 144 2.6E-40 T 14-09-2016 AMK01_RS01810 1e221555143ab4227703fb98947aedd3 320 Gene3D G3DSA:3.40.50.1100 145 316 1.3E-75 T 14-09-2016 AMK01_RS01810 1e221555143ab4227703fb98947aedd3 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 303 2.4E-67 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS04740 f5fee5c41317f9d39a6c89740012e0e1 396 Pfam PF06224 Winged helix DNA-binding domain 38 382 1.9E-76 T 14-09-2016 IPR009351 Protein of unknown function DUF1006 AMK01_RS04740 f5fee5c41317f9d39a6c89740012e0e1 396 PANTHER PTHR30528 2 390 9.6E-82 T 14-09-2016 AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 PANTHER PTHR24220:SF150 10 250 5.3E-127 T 14-09-2016 AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 SMART SM00382 33 216 4.1E-18 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 Pfam PF00005 ABC transporter 26 166 6.3E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 PANTHER PTHR24220 10 250 5.3E-127 T 14-09-2016 AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 SUPERFAMILY SSF52540 9 248 9.35E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 SUPERFAMILY SSF50331 242 348 6.8E-10 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 Gene3D G3DSA:3.40.50.300 7 238 4.0E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS10895 909dce375cc30abbf555d401fbb4dedb 353 Pfam PF08402 TOBE domain 280 346 3.3E-9 T 14-09-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK01_RS13625 48ba1ac3f4e5c73994ef9a97474e9812 104 Pfam PF12706 Beta-lactamase superfamily domain 7 63 2.1E-10 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS13625 48ba1ac3f4e5c73994ef9a97474e9812 104 PANTHER PTHR15032 3 103 4.6E-38 T 14-09-2016 AMK01_RS13625 48ba1ac3f4e5c73994ef9a97474e9812 104 Gene3D G3DSA:3.60.15.10 3 102 3.7E-24 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS13625 48ba1ac3f4e5c73994ef9a97474e9812 104 SUPERFAMILY SSF56281 9 72 1.01E-5 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS13625 48ba1ac3f4e5c73994ef9a97474e9812 104 PANTHER PTHR15032:SF4 3 103 4.6E-38 T 14-09-2016 AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 PANTHER PTHR30154:SF0 1 148 2.3E-51 T 14-09-2016 AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 Gene3D G3DSA:1.10.10.10 6 56 3.2E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 Gene3D G3DSA:3.30.70.920 58 142 2.9E-26 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 PANTHER PTHR30154 1 148 2.3E-51 T 14-09-2016 AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.3E-13 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.3E-13 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.3E-13 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 1.8E-15 T 14-09-2016 AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 SUPERFAMILY SSF46785 4 95 6.15E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 SUPERFAMILY SSF54909 65 153 4.69E-18 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 SMART SM00344 5 114 1.8E-32 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS08800 c62c8642491100783bbb711aad5e2c79 166 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 5.3E-20 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 PRINTS PR01035 Tetracycline resistance protein signature 37 53 1.3E-6 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 PRINTS PR01035 Tetracycline resistance protein signature 151 173 1.3E-6 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 PRINTS PR01035 Tetracycline resistance protein signature 350 373 1.3E-6 T 14-09-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 14-09-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 PANTHER PTHR23502 28 427 2.2E-53 T 14-09-2016 AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 Gene3D G3DSA:1.20.1250.20 29 204 3.4E-26 T 14-09-2016 AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 PANTHER PTHR23502:SF19 28 427 2.2E-53 T 14-09-2016 AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 SUPERFAMILY SSF103473 28 409 6.93E-52 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 Gene3D G3DSA:1.20.1250.20 222 410 3.5E-7 T 14-09-2016 AMK01_RS12510 929d95686abefe15d29ea53725efeeb4 427 Pfam PF07690 Major Facilitator Superfamily 31 369 1.5E-34 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS12045 1c99b274c735492d2743882167714b25 245 SMART SM00855 2 180 1.5E-17 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS12045 1c99b274c735492d2743882167714b25 245 Gene3D G3DSA:3.40.50.1240 1 208 3.3E-41 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS12045 1c99b274c735492d2743882167714b25 245 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 209 1.8E-27 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS12045 1c99b274c735492d2743882167714b25 245 PANTHER PTHR23029:SF26 1 207 1.6E-39 T 14-09-2016 AMK01_RS12045 1c99b274c735492d2743882167714b25 245 PANTHER PTHR23029 1 207 1.6E-39 T 14-09-2016 AMK01_RS12045 1c99b274c735492d2743882167714b25 245 SUPERFAMILY SSF53254 1 207 1.57E-39 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS12045 1c99b274c735492d2743882167714b25 245 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-09-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 AMK01_RS10690 e76adebcf65ae7d880d3f8452a0b3bb5 306 PANTHER PTHR32196 8 305 1.2E-114 T 14-09-2016 AMK01_RS10690 e76adebcf65ae7d880d3f8452a0b3bb5 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 280 1.0E-35 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS10690 e76adebcf65ae7d880d3f8452a0b3bb5 306 PANTHER PTHR32196:SF33 8 305 1.2E-114 T 14-09-2016 AMK01_RS17380 85309e3053a3b1cea603cf96f5e568a1 493 PANTHER PTHR30250 1 493 3.1E-45 T 14-09-2016 AMK01_RS17380 85309e3053a3b1cea603cf96f5e568a1 493 Pfam PF13440 Polysaccharide biosynthesis protein 32 321 4.3E-52 T 14-09-2016 AMK01_RS17380 85309e3053a3b1cea603cf96f5e568a1 493 PANTHER PTHR30250:SF0 1 493 3.1E-45 T 14-09-2016 AMK01_RS00210 de5346397288adba71624b3a3a1f1b29 107 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 6 89 1.5E-29 T 14-09-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMK01_RS00210 de5346397288adba71624b3a3a1f1b29 107 Gene3D G3DSA:1.10.287.1080 9 87 8.4E-5 T 14-09-2016 AMK01_RS00210 de5346397288adba71624b3a3a1f1b29 107 PANTHER PTHR21256 6 104 1.1E-33 T 14-09-2016 AMK01_RS00210 de5346397288adba71624b3a3a1f1b29 107 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 3 89 19.697 T 14-09-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMK01_RS00210 de5346397288adba71624b3a3a1f1b29 107 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 92 9.1E-17 T 14-09-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMK01_RS00210 de5346397288adba71624b3a3a1f1b29 107 SUPERFAMILY SSF101386 6 93 2.24E-23 T 14-09-2016 AMK01_RS20470 180cd5244c8baecd63a9641eafd8dbbf 165 Pfam PF09351 Domain of unknown function (DUF1993) 5 164 1.2E-55 T 14-09-2016 IPR018531 Domain of unknown function DUF1993 AMK01_RS20470 180cd5244c8baecd63a9641eafd8dbbf 165 PANTHER PTHR36922 1 165 1.1E-62 T 14-09-2016 AMK01_RS20470 180cd5244c8baecd63a9641eafd8dbbf 165 Gene3D G3DSA:1.20.120.450 1 165 5.3E-66 T 14-09-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase AMK01_RS20470 180cd5244c8baecd63a9641eafd8dbbf 165 PANTHER PTHR36922:SF1 1 165 1.1E-62 T 14-09-2016 AMK01_RS20470 180cd5244c8baecd63a9641eafd8dbbf 165 SUPERFAMILY SSF109854 4 165 1.46E-55 T 14-09-2016 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 SUPERFAMILY SSF46589 1 114 1.73E-27 T 14-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 PIRSF PIRSF001529 1 426 2.4E-162 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 SUPERFAMILY SSF55681 118 419 3.4E-94 T 14-09-2016 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 1.2E-150 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.4E-27 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.4E-27 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.4E-27 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.4E-27 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.4E-27 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 38.451 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 Gene3D G3DSA:3.30.930.10 107 420 1.8E-133 T 14-09-2016 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 400 5.4E-34 T 14-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 Gene3D G3DSA:1.10.287.40 1 106 1.3E-28 T 14-09-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 PANTHER PTHR11778 1 425 4.0E-192 T 14-09-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK01_RS09215 637b43f0dad5649b7c98f4c80b1f8c01 427 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.3E-31 T 14-09-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AMK01_RS18400 aecc3ae224ecc6babc82e0c29f924ef9 350 Pfam PF01212 Beta-eliminating lyase 3 274 1.8E-48 T 14-09-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 AMK01_RS18400 aecc3ae224ecc6babc82e0c29f924ef9 350 PANTHER PTHR10289 3 348 3.8E-120 T 14-09-2016 AMK01_RS18400 aecc3ae224ecc6babc82e0c29f924ef9 350 PANTHER PTHR10289:SF8 3 348 3.8E-120 T 14-09-2016 AMK01_RS18400 aecc3ae224ecc6babc82e0c29f924ef9 350 Gene3D G3DSA:3.90.1150.10 253 348 5.2E-24 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS18400 aecc3ae224ecc6babc82e0c29f924ef9 350 SUPERFAMILY SSF53383 3 348 2.54E-84 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS18400 aecc3ae224ecc6babc82e0c29f924ef9 350 Gene3D G3DSA:3.40.640.10 3 251 3.5E-48 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS18400 aecc3ae224ecc6babc82e0c29f924ef9 350 PIRSF PIRSF038940 1 350 7.1E-144 T 14-09-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 AMK01_RS14550 87ca0119ad8ba4cf64a1c79dec619583 178 SUPERFAMILY SSF55729 17 177 4.63E-38 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS14550 87ca0119ad8ba4cf64a1c79dec619583 178 Gene3D G3DSA:3.40.630.30 17 177 2.0E-34 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS14550 87ca0119ad8ba4cf64a1c79dec619583 178 PANTHER PTHR23091:SF262 19 177 2.5E-32 T 14-09-2016 AMK01_RS14550 87ca0119ad8ba4cf64a1c79dec619583 178 Pfam PF00583 Acetyltransferase (GNAT) family 74 152 7.4E-15 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS14550 87ca0119ad8ba4cf64a1c79dec619583 178 PANTHER PTHR23091 19 177 2.5E-32 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 3.7E-97 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PIRSF PIRSF004557 2 442 8.7E-121 T 14-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PANTHER PTHR10906:SF2 13 446 1.4E-205 T 14-09-2016 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 SUPERFAMILY SSF103491 15 425 1.96E-130 T 14-09-2016 IPR023201 SecY subunit domain AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 Gene3D G3DSA:1.10.3370.10 16 438 7.3E-163 T 14-09-2016 IPR023201 SecY subunit domain AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 ProSitePatterns PS00756 Protein secY signature 2. 174 191 - T 14-09-2016 IPR030659 SecY conserved site AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 Pfam PF00344 SecY translocase 81 418 2.9E-116 T 14-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 434 29.454 T 14-09-2016 IPR026593 Protein translocase subunit SecY AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 430 3.3E-130 T 14-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK01_RS08550 de794f8dd25d39dfb9ab581ded3a4564 446 PANTHER PTHR10906 13 446 1.4E-205 T 14-09-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK01_RS16210 87575701048acb82452959f85cc0e510 190 Gene3D G3DSA:1.10.10.60 140 177 1.1E-6 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16210 87575701048acb82452959f85cc0e510 190 Pfam PF00239 Resolvase, N terminal domain 4 138 7.7E-44 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS16210 87575701048acb82452959f85cc0e510 190 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-09-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMK01_RS16210 87575701048acb82452959f85cc0e510 190 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 14-09-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AMK01_RS16210 87575701048acb82452959f85cc0e510 190 PANTHER PTHR30461 1 189 2.1E-47 T 14-09-2016 AMK01_RS16210 87575701048acb82452959f85cc0e510 190 Gene3D G3DSA:3.40.50.1390 4 122 8.3E-39 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS16210 87575701048acb82452959f85cc0e510 190 SMART SM00857 3 138 5.5E-56 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS16210 87575701048acb82452959f85cc0e510 190 SUPERFAMILY SSF53041 1 138 4.58E-43 T 14-09-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AMK01_RS14295 225307f58186bdf6ca629e267a9cbc4b 197 PANTHER PTHR30086:SF12 1 191 2.8E-73 T 14-09-2016 AMK01_RS14295 225307f58186bdf6ca629e267a9cbc4b 197 PANTHER PTHR30086 1 191 2.8E-73 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS14295 225307f58186bdf6ca629e267a9cbc4b 197 Pfam PF01810 LysE type translocator 16 189 5.5E-17 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS13600 0b3bc93a60ac20f7c4b1622d810eaf01 186 SUPERFAMILY SSF55874 66 148 3.87E-5 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS13600 0b3bc93a60ac20f7c4b1622d810eaf01 186 Gene3D G3DSA:3.30.565.10 69 148 1.9E-4 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.1E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.1E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.1E-5 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 SUPERFAMILY SSF51735 6 254 1.85E-75 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.0E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.0E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.0E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.0E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 8.0E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.0E-34 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PANTHER PTHR24321 3 254 2.1E-59 T 14-09-2016 AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 5.6E-61 T 14-09-2016 AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 PANTHER PTHR24321:SF6 3 254 2.1E-59 T 14-09-2016 AMK01_RS04665 906e9a9fead2e0e5952475d58141050c 255 Gene3D G3DSA:3.40.50.720 1 254 1.1E-77 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19035 f6e5e22ea56ab372618572925a42a284 219 PANTHER PTHR41795 22 214 3.1E-27 T 14-09-2016 AMK01_RS19035 f6e5e22ea56ab372618572925a42a284 219 PIRSF PIRSF033239 13 215 1.2E-60 T 14-09-2016 IPR010331 Exopolysaccharide synthesis, ExoD AMK01_RS19035 f6e5e22ea56ab372618572925a42a284 219 Pfam PF06055 Exopolysaccharide synthesis, ExoD 24 200 2.5E-57 T 14-09-2016 IPR010331 Exopolysaccharide synthesis, ExoD AMK01_RS07750 78e84822a90fa1e7d1d4e0c59c4cf7f0 348 PANTHER PTHR30100 1 342 3.8E-116 T 14-09-2016 AMK01_RS07750 78e84822a90fa1e7d1d4e0c59c4cf7f0 348 PANTHER PTHR30100:SF1 1 342 3.8E-116 T 14-09-2016 AMK01_RS07750 78e84822a90fa1e7d1d4e0c59c4cf7f0 348 Gene3D G3DSA:3.40.718.10 2 335 2.4E-119 T 14-09-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK01_RS07750 78e84822a90fa1e7d1d4e0c59c4cf7f0 348 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 335 9.8E-89 T 14-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMK01_RS07750 78e84822a90fa1e7d1d4e0c59c4cf7f0 348 Pfam PF02504 Fatty acid synthesis protein 2 326 1.0E-98 T 14-09-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 AMK01_RS07750 78e84822a90fa1e7d1d4e0c59c4cf7f0 348 PIRSF PIRSF002465 1 339 1.2E-116 T 14-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMK01_RS07750 78e84822a90fa1e7d1d4e0c59c4cf7f0 348 SUPERFAMILY SSF53659 2 337 2.47E-98 T 14-09-2016 AMK01_RS07750 78e84822a90fa1e7d1d4e0c59c4cf7f0 348 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 144.741 T 14-09-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 AMK01_RS06425 8d0207f2f82e531de515a8f377c31fd9 143 Pfam PF05443 ROS/MUCR transcriptional regulator protein 13 135 7.0E-50 T 14-09-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 Pfam PF05191 Adenylate kinase, active site lid 127 163 4.7E-10 T 14-09-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 Gene3D G3DSA:3.40.50.300 1 212 4.5E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 SUPERFAMILY SSF52540 1 215 4.61E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 PANTHER PTHR23359 1 216 6.1E-90 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 Pfam PF00406 Adenylate kinase 5 191 8.7E-58 T 14-09-2016 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.6E-76 T 14-09-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 PRINTS PR00094 Adenylate kinase signature 32 46 5.0E-34 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 PRINTS PR00094 Adenylate kinase signature 178 192 5.0E-34 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 PRINTS PR00094 Adenylate kinase signature 81 97 5.0E-34 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 PRINTS PR00094 Adenylate kinase signature 4 17 5.0E-34 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 PRINTS PR00094 Adenylate kinase signature 161 176 5.0E-34 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS08555 5ec5318b1ed129700d0995a06b6eb2c5 216 Hamap MF_00235 Adenylate kinase [adk]. 1 214 47.126 T 14-09-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 PANTHER PTHR11614:SF100 15 308 3.6E-67 T 14-09-2016 AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 SUPERFAMILY SSF53474 10 304 9.46E-40 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 PANTHER PTHR11614 15 308 3.6E-67 T 14-09-2016 AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 6.9E-5 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 PRINTS PR00111 Alpha/beta hydrolase fold signature 70 85 6.9E-5 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 6.9E-5 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 PRINTS PR00111 Alpha/beta hydrolase fold signature 251 265 6.9E-5 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 Pfam PF12146 Serine aminopeptidase, S33 42 294 5.1E-47 T 14-09-2016 IPR022742 Serine aminopeptidase, S33 AMK01_RS18420 88c05f4c325859da91dbb774f60b4e32 324 Gene3D G3DSA:3.40.50.1820 18 295 2.0E-35 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS17860 46ec7b3b33d76fbb89a25dd21a5c9a62 329 Pfam PF13174 Tetratricopeptide repeat 282 311 1.2E-4 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS17860 46ec7b3b33d76fbb89a25dd21a5c9a62 329 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 205 319 1.1E-40 T 14-09-2016 IPR014162 Tol-Pal system, YbgF AMK01_RS17860 46ec7b3b33d76fbb89a25dd21a5c9a62 329 Gene3D G3DSA:1.25.40.10 208 318 4.0E-12 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS17860 46ec7b3b33d76fbb89a25dd21a5c9a62 329 PANTHER PTHR26312 218 315 1.3E-12 T 14-09-2016 AMK01_RS17860 46ec7b3b33d76fbb89a25dd21a5c9a62 329 PANTHER PTHR26312:SF74 218 315 1.3E-12 T 14-09-2016 AMK01_RS17860 46ec7b3b33d76fbb89a25dd21a5c9a62 329 SUPERFAMILY SSF48452 210 316 2.78E-12 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS17860 46ec7b3b33d76fbb89a25dd21a5c9a62 329 Pfam PF13432 Tetratricopeptide repeat 212 271 3.7E-10 T 14-09-2016 AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 SUPERFAMILY SSF47090 339 406 1.44E-15 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 42 335 9.5E-99 T 14-09-2016 IPR011970 Lytic murein transglycosylase AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 SUPERFAMILY SSF53955 30 336 2.44E-84 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 PANTHER PTHR30163 44 406 5.7E-110 T 14-09-2016 IPR011757 Lytic transglycosylase MltB AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 Gene3D G3DSA:1.10.530.10 86 142 5.8E-41 T 14-09-2016 AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 Gene3D G3DSA:1.10.530.10 223 337 5.8E-41 T 14-09-2016 AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 Pfam PF01471 Putative peptidoglycan binding domain 352 406 2.6E-11 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 Pfam PF13406 Transglycosylase SLT domain 44 331 1.0E-82 T 14-09-2016 IPR031304 Transglycosylase SLT domain 2 AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 PANTHER PTHR30163:SF2 44 406 5.7E-110 T 14-09-2016 AMK01_RS14730 94ba468485af8c0b10a5122188fdd4f2 406 Gene3D G3DSA:1.10.101.10 343 406 3.7E-13 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS04495 7ab13a072f1538b14829d1cc5b14cec3 183 Pfam PF13238 AAA domain 11 135 2.7E-9 T 14-09-2016 AMK01_RS04495 7ab13a072f1538b14829d1cc5b14cec3 183 SUPERFAMILY SSF52540 7 179 9.55E-16 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04495 7ab13a072f1538b14829d1cc5b14cec3 183 Gene3D G3DSA:3.40.50.300 8 181 8.2E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14390 07e9ca9fe647841ea93326969bf5a75e 1236 Pfam PF05170 AsmA family 8 125 2.2E-11 T 14-09-2016 IPR007844 AsmA AMK01_RS14390 07e9ca9fe647841ea93326969bf5a75e 1236 Pfam PF13502 AsmA-like C-terminal region 885 1084 2.7E-26 T 14-09-2016 IPR032712 AsmA-like, C-terminal AMK01_RS14390 07e9ca9fe647841ea93326969bf5a75e 1236 PIRSF PIRSF034039 2 1226 0.0 T 14-09-2016 IPR017023 Uncharacterised conserved protein UCP034039 AMK01_RS18285 c83fe8e4afd08e142d7c699949f1938b 157 Pfam PF06282 Protein of unknown function (DUF1036) 35 147 7.9E-43 T 14-09-2016 IPR009380 Protein of unknown function DUF1036 AMK01_RS19390 376bc33347d0d787fcf5f598d231c220 471 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 371 455 4.4E-12 T 14-09-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMK01_RS19390 376bc33347d0d787fcf5f598d231c220 471 Pfam PF01943 Polysaccharide biosynthesis protein 47 319 8.8E-17 T 14-09-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AMK01_RS04855 447bf0694a409349973cf9730cce6951 316 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 20 304 19.919 T 14-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AMK01_RS04855 447bf0694a409349973cf9730cce6951 316 PANTHER PTHR11048 22 304 4.1E-66 T 14-09-2016 AMK01_RS04855 447bf0694a409349973cf9730cce6951 316 Pfam PF01040 UbiA prenyltransferase family 36 275 8.9E-59 T 14-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AMK01_RS04855 447bf0694a409349973cf9730cce6951 316 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 22 302 2.7E-97 T 14-09-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 AMK01_RS04855 447bf0694a409349973cf9730cce6951 316 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 14-09-2016 IPR030470 UbiA prenyltransferase conserved site AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 PANTHER PTHR30537:SF1 1 298 2.6E-89 T 14-09-2016 AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 Gene3D G3DSA:3.40.190.10 179 263 6.8E-17 T 14-09-2016 AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 Gene3D G3DSA:3.40.190.10 96 178 6.9E-13 T 14-09-2016 AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 Pfam PF03466 LysR substrate binding domain 89 295 1.4E-34 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-19 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 Gene3D G3DSA:1.10.10.10 4 88 1.2E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 PANTHER PTHR30537 1 298 2.6E-89 T 14-09-2016 AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 SUPERFAMILY SSF53850 91 295 1.5E-38 T 14-09-2016 AMK01_RS01635 cb198a161bf9d5af86bf54990b7d2e92 298 SUPERFAMILY SSF46785 4 88 1.77E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04755 9b61764a1c084cf70d3573c000688e9e 86 Pfam PF07076 Protein of unknown function (DUF1344) 24 83 3.4E-30 T 14-09-2016 IPR009780 Protein of unknown function DUF1344 AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 SUPERFAMILY SSF111304 8 201 1.57E-69 T 14-09-2016 IPR023627 Recombination protein RecR AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 TIGRFAM TIGR00615 recR: recombination protein RecR 8 198 9.5E-64 T 14-09-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 Pfam PF02132 RecR protein 45 81 3.6E-13 T 14-09-2016 IPR023628 Recombination protein RecR, C4-type zinc finger AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 201 93.796 T 14-09-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 PANTHER PTHR30446:SF0 4 201 1.6E-92 T 14-09-2016 AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 PANTHER PTHR30446 4 201 1.6E-92 T 14-09-2016 AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 Pfam PF13662 Toprim domain 83 174 4.1E-25 T 14-09-2016 IPR006171 Toprim domain AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 ProSitePatterns PS01300 RecR protein signature. 60 81 - T 14-09-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AMK01_RS00765 2302f1ebd774a346b9978a53c03db14b 201 SMART SM00493 83 168 1.3E-5 T 14-09-2016 IPR006171 Toprim domain AMK01_RS01785 2a8dc776081ea6978fbaa5f06ececa63 122 Pfam PF02021 Uncharacterised protein family UPF0102 21 109 1.9E-19 T 14-09-2016 IPR003509 Uncharacterised protein family UPF0102 AMK01_RS01785 2a8dc776081ea6978fbaa5f06ececa63 122 PANTHER PTHR34039:SF1 9 121 3.4E-26 T 14-09-2016 AMK01_RS01785 2a8dc776081ea6978fbaa5f06ececa63 122 PANTHER PTHR34039 9 121 3.4E-26 T 14-09-2016 AMK01_RS01785 2a8dc776081ea6978fbaa5f06ececa63 122 Gene3D G3DSA:3.40.1350.10 20 122 1.9E-27 T 14-09-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 AMK01_RS01785 2a8dc776081ea6978fbaa5f06ececa63 122 SUPERFAMILY SSF52980 15 121 1.3E-21 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AMK01_RS01785 2a8dc776081ea6978fbaa5f06ececa63 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 13 122 20.223 T 14-09-2016 IPR003509 Uncharacterised protein family UPF0102 AMK01_RS11350 d665b512b72d3ac687a7f0ff9e1202b5 254 PANTHER PTHR31881:SF3 1 225 7.0E-57 T 14-09-2016 AMK01_RS11350 d665b512b72d3ac687a7f0ff9e1202b5 254 PANTHER PTHR31881 1 225 7.0E-57 T 14-09-2016 AMK01_RS11350 d665b512b72d3ac687a7f0ff9e1202b5 254 Pfam PF04654 Protein of unknown function, DUF599 7 219 2.3E-54 T 14-09-2016 IPR006747 Protein of unknown function DUF599 AMK01_RS18410 e5303bdd9079a5f4702c1240c11ae863 334 PIRSF PIRSF026166 1 333 7.8E-138 T 14-09-2016 IPR016833 Putative sodium bile acid cotransporter AMK01_RS18410 e5303bdd9079a5f4702c1240c11ae863 334 PANTHER PTHR18640:SF9 1 327 2.7E-91 T 14-09-2016 AMK01_RS18410 e5303bdd9079a5f4702c1240c11ae863 334 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 7 315 3.5E-101 T 14-09-2016 IPR016833 Putative sodium bile acid cotransporter AMK01_RS18410 e5303bdd9079a5f4702c1240c11ae863 334 PANTHER PTHR18640 1 327 2.7E-91 T 14-09-2016 IPR016833 Putative sodium bile acid cotransporter AMK01_RS27195 43d96f9eb70f2e397c2fe56a3dc8191d 334 Pfam PF12860 PAS fold 192 305 4.4E-10 T 14-09-2016 AMK01_RS27195 43d96f9eb70f2e397c2fe56a3dc8191d 334 SUPERFAMILY SSF55785 170 231 2.09E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS27195 43d96f9eb70f2e397c2fe56a3dc8191d 334 Gene3D G3DSA:3.30.450.20 67 172 1.9E-5 T 14-09-2016 AMK01_RS16625 284bd359bc8ba6a93c08679d800e7087 396 Pfam PF04932 O-Antigen ligase 176 319 8.6E-18 T 14-09-2016 IPR007016 O-antigen ligase-related AMK01_RS11610 a730170f06e4fd15282389e1678e8964 106 Gene3D G3DSA:3.30.1460.30 5 103 1.3E-34 T 14-09-2016 IPR007076 TfoX, N-terminal AMK01_RS11610 a730170f06e4fd15282389e1678e8964 106 Pfam PF04993 TfoX N-terminal domain 8 101 5.7E-30 T 14-09-2016 IPR007076 TfoX, N-terminal AMK01_RS11610 a730170f06e4fd15282389e1678e8964 106 SUPERFAMILY SSF159894 5 102 1.8E-29 T 14-09-2016 AMK01_RS12490 e5b1454a4cd5d35a7e36ebbd8a535791 338 Pfam PF02277 Phosphoribosyltransferase 20 334 1.9E-110 T 14-09-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK01_RS12490 e5b1454a4cd5d35a7e36ebbd8a535791 338 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 22 334 8.0E-114 T 14-09-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK01_RS12490 e5b1454a4cd5d35a7e36ebbd8a535791 338 Gene3D G3DSA:3.40.50.10210 79 316 1.2E-86 T 14-09-2016 AMK01_RS12490 e5b1454a4cd5d35a7e36ebbd8a535791 338 PANTHER PTHR21712 14 337 1.2E-83 T 14-09-2016 AMK01_RS12490 e5b1454a4cd5d35a7e36ebbd8a535791 338 Gene3D G3DSA:1.10.1610.10 9 78 5.6E-29 T 14-09-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK01_RS12490 e5b1454a4cd5d35a7e36ebbd8a535791 338 PANTHER PTHR21712:SF4 14 337 1.2E-83 T 14-09-2016 AMK01_RS12490 e5b1454a4cd5d35a7e36ebbd8a535791 338 SUPERFAMILY SSF52733 13 336 1.96E-111 T 14-09-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK01_RS12490 e5b1454a4cd5d35a7e36ebbd8a535791 338 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 20 336 34.577 T 14-09-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK01_RS06255 1aaca46a2c3b1e7d3e0a4c45e6acdc39 164 SUPERFAMILY SSF55729 17 153 8.58E-26 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS06255 1aaca46a2c3b1e7d3e0a4c45e6acdc39 164 Gene3D G3DSA:3.40.630.30 14 158 1.6E-30 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS06255 1aaca46a2c3b1e7d3e0a4c45e6acdc39 164 PANTHER PTHR10545 1 149 2.9E-28 T 14-09-2016 AMK01_RS06255 1aaca46a2c3b1e7d3e0a4c45e6acdc39 164 Pfam PF00583 Acetyltransferase (GNAT) family 71 150 1.7E-12 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 Gene3D G3DSA:1.50.10.10 2 346 6.9E-76 T 14-09-2016 IPR012341 Six-hairpin glycosidase GO:0003824 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 SUPERFAMILY SSF48208 5 346 5.95E-85 T 14-09-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 Pfam PF01270 Glycosyl hydrolases family 8 4 339 1.3E-60 T 14-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 PRINTS PR00735 Glycosyl hydrolase family 8 signature 57 70 2.2E-22 T 14-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 2.2E-22 T 14-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 PRINTS PR00735 Glycosyl hydrolase family 8 signature 245 254 2.2E-22 T 14-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 PRINTS PR00735 Glycosyl hydrolase family 8 signature 222 233 2.2E-22 T 14-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 PRINTS PR00735 Glycosyl hydrolase family 8 signature 327 341 2.2E-22 T 14-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMK01_RS07800 b4d3c10110f76d8acf475775dec946a6 348 PRINTS PR00735 Glycosyl hydrolase family 8 signature 182 199 2.2E-22 T 14-09-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AMK01_RS15540 08a3bd20e24e14c16cb459560ff162a9 61 Pfam PF06348 Protein of unknown function (DUF1059) 1 56 1.8E-21 T 14-09-2016 IPR009409 Protein of unknown function DUF1059 AMK01_RS06810 15190ac746c90267a9673964ad7cb0df 148 Pfam PF10116 Protein required for attachment to host cells 11 146 3.0E-41 T 14-09-2016 IPR019291 Host attachment protein AMK01_RS02615 437d7d83915aab6bcdc2ec66d0f308cc 302 PANTHER PTHR30177 24 301 1.8E-102 T 14-09-2016 AMK01_RS02615 437d7d83915aab6bcdc2ec66d0f308cc 302 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 23 297 1.4E-51 T 14-09-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AMK01_RS02615 437d7d83915aab6bcdc2ec66d0f308cc 302 Gene3D G3DSA:3.40.190.120 131 237 1.2E-25 T 14-09-2016 AMK01_RS02615 437d7d83915aab6bcdc2ec66d0f308cc 302 Gene3D G3DSA:3.40.190.10 21 130 3.0E-55 T 14-09-2016 AMK01_RS02615 437d7d83915aab6bcdc2ec66d0f308cc 302 Gene3D G3DSA:3.40.190.10 251 302 3.0E-55 T 14-09-2016 AMK01_RS02615 437d7d83915aab6bcdc2ec66d0f308cc 302 PANTHER PTHR30177:SF12 24 301 1.8E-102 T 14-09-2016 AMK01_RS02615 437d7d83915aab6bcdc2ec66d0f308cc 302 SUPERFAMILY SSF53850 23 301 3.64E-54 T 14-09-2016 AMK01_RS05475 b27b6fcbb2ccd0239a09de8c05609e8c 154 PANTHER PTHR13009 7 153 1.8E-20 T 14-09-2016 AMK01_RS05475 b27b6fcbb2ccd0239a09de8c05609e8c 154 Gene3D G3DSA:3.30.530.20 8 152 3.8E-35 T 14-09-2016 IPR023393 START-like domain AMK01_RS05475 b27b6fcbb2ccd0239a09de8c05609e8c 154 SUPERFAMILY SSF55961 6 152 1.44E-34 T 14-09-2016 AMK01_RS05475 b27b6fcbb2ccd0239a09de8c05609e8c 154 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 150 1.1E-20 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS03720 92cbcb448e485b97596eb7ff1bb1d9d3 232 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 220 9.6E-54 T 14-09-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMK01_RS03720 92cbcb448e485b97596eb7ff1bb1d9d3 232 Gene3D G3DSA:3.40.50.1360 4 223 4.6E-52 T 14-09-2016 AMK01_RS03720 92cbcb448e485b97596eb7ff1bb1d9d3 232 SUPERFAMILY SSF100950 5 222 7.18E-54 T 14-09-2016 AMK01_RS03720 92cbcb448e485b97596eb7ff1bb1d9d3 232 PANTHER PTHR11054 5 230 2.1E-41 T 14-09-2016 AMK01_RS03720 92cbcb448e485b97596eb7ff1bb1d9d3 232 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 8 222 9.0E-55 T 14-09-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 AMK01_RS05440 20f5d9f84960c449f3343e9df0ebe8b7 284 Pfam PF14099 Polysaccharide lyase 49 272 1.1E-31 T 14-09-2016 IPR025975 Polysaccharide lyase MetaCyc: PWY-7644 AMK01_RS01455 6475b0bc76e65556d04e8fe6f4c86d98 155 Gene3D G3DSA:1.10.490.10 30 138 1.1E-21 T 14-09-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMK01_RS01455 6475b0bc76e65556d04e8fe6f4c86d98 155 SUPERFAMILY SSF46458 29 137 3.84E-25 T 14-09-2016 IPR009050 Globin-like AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 PANTHER PTHR11374 1 438 2.8E-236 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 SUPERFAMILY SSF48179 201 294 9.69E-32 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 SMART SM00984 317 418 2.6E-51 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 SUPERFAMILY SSF52413 302 428 3.53E-40 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 Gene3D G3DSA:3.40.50.720 1 204 1.2E-76 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 2.6E-140 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 SUPERFAMILY SSF51735 1 205 2.98E-53 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 5.7E-70 T 14-09-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 PIRSF PIRSF000124 1 433 5.9E-143 T 14-09-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 4.8E-36 T 14-09-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 Gene3D G3DSA:3.40.50.720 233 434 1.4E-76 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 417 5.1E-33 T 14-09-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 PIRSF PIRSF500134 1 436 8.3E-182 T 14-09-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 PANTHER PTHR11374:SF18 1 438 2.8E-236 T 14-09-2016 AMK01_RS16700 085131dce5c9ed24884c46cc182948a0 439 Gene3D G3DSA:1.20.5.100 205 231 3.3E-19 T 14-09-2016 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 SUPERFAMILY SSF110921 454 564 2.09E-34 T 14-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 Pfam PF00682 HMGL-like 43 320 3.2E-73 T 14-09-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 SMART SM00917 432 565 1.5E-30 T 14-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 SUPERFAMILY SSF51569 31 338 3.85E-94 T 14-09-2016 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 18 564 1.0E-233 T 14-09-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 Gene3D G3DSA:3.20.20.70 19 404 1.5E-141 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 251 264 - T 14-09-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 PANTHER PTHR10277 5 572 6.8E-257 T 14-09-2016 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 SUPERFAMILY SSF89000 398 447 1.73E-13 T 14-09-2016 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 PANTHER PTHR10277:SF28 5 572 6.8E-257 T 14-09-2016 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 49 65 - T 14-09-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 17 566 53.421 T 14-09-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS15620 d00909e47a4ba15893f8f5c0cc42d2c4 572 Pfam PF08502 LeuA allosteric (dimerisation) domain 437 565 1.1E-28 T 14-09-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 PANTHER PTHR13748 2 350 7.9E-121 T 14-09-2016 AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 PANTHER PTHR13748:SF10 2 350 7.9E-121 T 14-09-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 SUPERFAMILY SSF52540 4 206 3.18E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 Gene3D G3DSA:3.30.1220.10 238 348 2.6E-25 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 4 344 3.0E-172 T 14-09-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 SUPERFAMILY SSF90002 256 348 1.22E-18 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 SMART SM00833 256 349 1.7E-4 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 Gene3D G3DSA:3.40.50.300 4 227 5.6E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 348 2.8E-16 T 14-09-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK01_RS12740 1b6686fdb0740d5ea05d492815e647a9 351 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 204 8.0E-58 T 14-09-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS13495 259447621db77813e3558b371c7acda4 296 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 210 3.5E-14 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS13495 259447621db77813e3558b371c7acda4 296 SUPERFAMILY SSF51735 1 280 1.15E-43 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13495 259447621db77813e3558b371c7acda4 296 PANTHER PTHR10366 2 289 7.7E-108 T 14-09-2016 AMK01_RS13495 259447621db77813e3558b371c7acda4 296 PANTHER PTHR10366:SF475 2 289 7.7E-108 T 14-09-2016 AMK01_RS13495 259447621db77813e3558b371c7acda4 296 Gene3D G3DSA:3.40.50.720 1 233 3.8E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS06210 43a6a49f56ed0deb283fe1c9aa2884f0 230 Gene3D G3DSA:1.10.10.10 1 63 1.5E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06210 43a6a49f56ed0deb283fe1c9aa2884f0 230 PANTHER PTHR34580 1 199 1.1E-34 T 14-09-2016 AMK01_RS06210 43a6a49f56ed0deb283fe1c9aa2884f0 230 SUPERFAMILY SSF46785 1 62 2.1E-8 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06210 43a6a49f56ed0deb283fe1c9aa2884f0 230 Pfam PF13280 WYL domain 137 227 2.6E-15 T 14-09-2016 IPR026881 WYL domain AMK01_RS06210 43a6a49f56ed0deb283fe1c9aa2884f0 230 PANTHER PTHR34580:SF3 1 199 1.1E-34 T 14-09-2016 AMK01_RS06210 43a6a49f56ed0deb283fe1c9aa2884f0 230 Pfam PF08279 HTH domain 6 60 4.0E-15 T 14-09-2016 IPR013196 Helix-turn-helix, type 11 AMK01_RS10555 82c415c7894cc4efd601eb423470e4b2 324 Pfam PF03786 D-mannonate dehydratase (UxuA) 35 109 3.3E-5 T 14-09-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 AMK01_RS10555 82c415c7894cc4efd601eb423470e4b2 324 Pfam PF03786 D-mannonate dehydratase (UxuA) 148 301 4.2E-33 T 14-09-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 AMK01_RS10555 82c415c7894cc4efd601eb423470e4b2 324 Gene3D G3DSA:3.20.20.150 7 322 3.7E-86 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS10555 82c415c7894cc4efd601eb423470e4b2 324 SUPERFAMILY SSF51658 150 323 1.55E-37 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS10555 82c415c7894cc4efd601eb423470e4b2 324 SUPERFAMILY SSF51658 9 119 1.55E-37 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS10555 82c415c7894cc4efd601eb423470e4b2 324 PANTHER PTHR30387:SF2 9 313 6.4E-34 T 14-09-2016 AMK01_RS10555 82c415c7894cc4efd601eb423470e4b2 324 PANTHER PTHR30387 9 313 6.4E-34 T 14-09-2016 AMK01_RS08345 fe547347fafbec914ab2877d1467052e 230 Gene3D G3DSA:2.40.128.10 35 111 1.8E-5 T 14-09-2016 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 AMK01_RS08345 fe547347fafbec914ab2877d1467052e 230 Gene3D G3DSA:2.40.128.10 131 221 1.6E-9 T 14-09-2016 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 AMK01_RS08345 fe547347fafbec914ab2877d1467052e 230 SUPERFAMILY SSF50882 131 227 1.15E-19 T 14-09-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 AMK01_RS08345 fe547347fafbec914ab2877d1467052e 230 Pfam PF02974 Protease inhibitor Inh 36 110 1.7E-8 T 14-09-2016 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 AMK01_RS08345 fe547347fafbec914ab2877d1467052e 230 Pfam PF02974 Protease inhibitor Inh 133 227 2.8E-19 T 14-09-2016 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 AMK01_RS08345 fe547347fafbec914ab2877d1467052e 230 SUPERFAMILY SSF50882 29 120 2.54E-14 T 14-09-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 AMK01_RS01190 1da4d533f4da461fe3d27b819d2633b5 425 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 168 345 4.1E-6 T 14-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK01_RS01190 1da4d533f4da461fe3d27b819d2633b5 425 SUPERFAMILY SSF52172 82 155 3.69E-5 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS01190 1da4d533f4da461fe3d27b819d2633b5 425 PANTHER PTHR13696:SF68 105 416 3.2E-83 T 14-09-2016 AMK01_RS01190 1da4d533f4da461fe3d27b819d2633b5 425 SUPERFAMILY SSF52540 166 407 4.78E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01190 1da4d533f4da461fe3d27b819d2633b5 425 Gene3D G3DSA:3.40.50.300 165 402 1.7E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01190 1da4d533f4da461fe3d27b819d2633b5 425 PANTHER PTHR13696 105 416 3.2E-83 T 14-09-2016 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 Pfam PF00202 Aminotransferase class-III 572 971 6.4E-71 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 PANTHER PTHR11986 312 372 3.7E-146 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 PANTHER PTHR11986:SF23 551 973 3.7E-146 T 14-09-2016 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 784 822 - T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 SUPERFAMILY SSF56112 15 327 1.6E-48 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 PANTHER PTHR11986:SF23 312 372 3.7E-146 T 14-09-2016 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 Gene3D G3DSA:3.40.640.10 604 855 1.1E-63 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 Gene3D G3DSA:3.90.1200.10 130 318 6.9E-21 T 14-09-2016 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 Gene3D G3DSA:3.30.200.20 24 103 3.3E-6 T 14-09-2016 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 SUPERFAMILY SSF53383 561 972 1.32E-105 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 Pfam PF01636 Phosphotransferase enzyme family 38 259 6.8E-23 T 14-09-2016 IPR002575 Aminoglycoside phosphotransferase AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 Gene3D G3DSA:3.90.1150.10 856 973 1.6E-34 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS01265 0d4befe0029be425f5d2316d3f87f87f 975 PANTHER PTHR11986 551 973 3.7E-146 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS04005 4ca3773091169cc025390b2184e5937f 377 SUPERFAMILY SSF53756 49 370 9.42E-7 T 14-09-2016 AMK01_RS04005 4ca3773091169cc025390b2184e5937f 377 Pfam PF13524 Glycosyl transferases group 1 278 365 1.6E-25 T 14-09-2016 AMK01_RS17115 4551e3c707ec9b57e1211888c1612612 104 Gene3D G3DSA:1.10.10.10 40 80 1.6E-6 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17115 4551e3c707ec9b57e1211888c1612612 104 SUPERFAMILY SSF46894 39 80 3.74E-5 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS10195 b0a51d28e789acc8aa1d0c76517a0a7d 578 PANTHER PTHR30121:SF1 134 560 8.8E-38 T 14-09-2016 AMK01_RS10195 b0a51d28e789acc8aa1d0c76517a0a7d 578 SUPERFAMILY SSF52540 353 550 1.73E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10195 b0a51d28e789acc8aa1d0c76517a0a7d 578 SUPERFAMILY SSF52540 134 285 1.73E-32 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10195 b0a51d28e789acc8aa1d0c76517a0a7d 578 PANTHER PTHR30121 134 560 8.8E-38 T 14-09-2016 AMK01_RS10195 b0a51d28e789acc8aa1d0c76517a0a7d 578 Pfam PF01935 Domain of unknown function DUF87 131 410 2.8E-30 T 14-09-2016 IPR002789 Helicase HerA, central domain AMK01_RS10195 b0a51d28e789acc8aa1d0c76517a0a7d 578 Gene3D G3DSA:3.40.50.300 367 549 6.0E-30 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10195 b0a51d28e789acc8aa1d0c76517a0a7d 578 Gene3D G3DSA:3.40.50.300 106 219 6.0E-30 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15990 92c36c42f768460dd96644796d9fa22e 120 Pfam PF01934 Protein of unknown function DUF86 13 109 2.4E-7 T 14-09-2016 IPR008201 Protein of unknown function DUF86 AMK01_RS15990 92c36c42f768460dd96644796d9fa22e 120 PANTHER PTHR34139 1 113 2.0E-12 T 14-09-2016 AMK01_RS20020 b88907f23c6c9d372056261cffe3ba38 171 PIRSF PIRSF034005 3 171 6.2E-62 T 14-09-2016 IPR010571 Outer membrane lipoprotein, Omp19, bacterial GO:0019867 AMK01_RS20020 b88907f23c6c9d372056261cffe3ba38 171 Pfam PF02974 Protease inhibitor Inh 84 171 5.7E-22 T 14-09-2016 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 AMK01_RS20020 b88907f23c6c9d372056261cffe3ba38 171 SUPERFAMILY SSF50882 84 171 5.23E-12 T 14-09-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 AMK01_RS00365 f836801959b11613a955d78a571680fe 619 PANTHER PTHR10587 14 261 5.5E-18 T 14-09-2016 AMK01_RS00365 f836801959b11613a955d78a571680fe 619 Pfam PF13506 Glycosyl transferase family 21 165 332 1.1E-26 T 14-09-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 AMK01_RS00365 f836801959b11613a955d78a571680fe 619 Gene3D G3DSA:3.90.550.10 114 345 3.6E-9 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS00365 f836801959b11613a955d78a571680fe 619 SUPERFAMILY SSF53448 110 384 1.29E-31 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS17135 72e20d4ae27f634371b88620a2913b7f 92 SUPERFAMILY SSF55729 6 91 1.08E-26 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS17135 72e20d4ae27f634371b88620a2913b7f 92 PANTHER PTHR31435 12 90 8.8E-21 T 14-09-2016 AMK01_RS17135 72e20d4ae27f634371b88620a2913b7f 92 Pfam PF14542 GCN5-related N-acetyl-transferase 13 90 6.2E-24 T 14-09-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMK01_RS17135 72e20d4ae27f634371b88620a2913b7f 92 Gene3D G3DSA:3.40.630.30 1 91 2.4E-35 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS17135 72e20d4ae27f634371b88620a2913b7f 92 PANTHER PTHR31435:SF3 12 90 8.8E-21 T 14-09-2016 AMK01_RS13080 4b4dc73cbc406e5034e8b7dc35291f6e 128 Pfam PF03061 Thioesterase superfamily 26 96 1.8E-12 T 14-09-2016 IPR006683 Thioesterase domain AMK01_RS13080 4b4dc73cbc406e5034e8b7dc35291f6e 128 Gene3D G3DSA:3.10.129.10 8 127 1.8E-34 T 14-09-2016 IPR029069 HotDog domain AMK01_RS13080 4b4dc73cbc406e5034e8b7dc35291f6e 128 PANTHER PTHR11049:SF5 7 127 1.5E-47 T 14-09-2016 AMK01_RS13080 4b4dc73cbc406e5034e8b7dc35291f6e 128 PANTHER PTHR11049 7 127 1.5E-47 T 14-09-2016 AMK01_RS13080 4b4dc73cbc406e5034e8b7dc35291f6e 128 SUPERFAMILY SSF54637 8 127 2.54E-33 T 14-09-2016 IPR029069 HotDog domain AMK01_RS07660 49629cf7e49a84080d467e806769ed9f 152 Pfam PF06271 RDD family 22 144 2.3E-17 T 14-09-2016 IPR010432 RDD AMK01_RS13935 ef887162cc8c775d6f79d09472e34652 271 Gene3D G3DSA:3.40.250.10 3 105 8.6E-16 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS13935 ef887162cc8c775d6f79d09472e34652 271 SMART SM00450 7 104 4.3E-9 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS13935 ef887162cc8c775d6f79d09472e34652 271 SUPERFAMILY SSF52821 1 155 3.14E-23 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS13935 ef887162cc8c775d6f79d09472e34652 271 Pfam PF00581 Rhodanese-like domain 8 100 1.4E-6 T 14-09-2016 IPR001763 Rhodanese-like domain AMK01_RS13935 ef887162cc8c775d6f79d09472e34652 271 Pfam PF09828 Chromate resistance exported protein 121 254 4.3E-49 T 14-09-2016 IPR018634 Chromate resistance exported protein AMK01_RS17875 8d20b67600036926ccf0b6cb8f9fa974 378 Gene3D G3DSA:3.30.1150.10 260 375 9.8E-6 T 14-09-2016 AMK01_RS26395 a976858bbd2cc5f1d61487903f300656 225 Pfam PF00005 ABC transporter 152 223 8.6E-15 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS26395 a976858bbd2cc5f1d61487903f300656 225 Pfam PF00664 ABC transporter transmembrane region 2 85 8.8E-6 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS26395 a976858bbd2cc5f1d61487903f300656 225 SUPERFAMILY SSF52540 119 223 4.75E-22 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS26395 a976858bbd2cc5f1d61487903f300656 225 Gene3D G3DSA:3.40.50.300 130 224 2.0E-21 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS26395 a976858bbd2cc5f1d61487903f300656 225 PANTHER PTHR24222 1 224 3.5E-76 T 14-09-2016 AMK01_RS26395 a976858bbd2cc5f1d61487903f300656 225 PANTHER PTHR24222:SF0 1 224 3.5E-76 T 14-09-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AMK01_RS26395 a976858bbd2cc5f1d61487903f300656 225 SUPERFAMILY SSF90123 3 127 1.2E-15 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS26395 a976858bbd2cc5f1d61487903f300656 225 Gene3D G3DSA:1.20.1560.10 2 117 1.5E-12 T 14-09-2016 AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 ProSitePatterns PS00211 ABC transporters family signature. 416 430 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 SMART SM00382 297 492 2.5E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 SMART SM00382 48 237 1.3E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 Gene3D G3DSA:3.40.50.300 285 504 2.5E-48 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 Gene3D G3DSA:3.40.50.300 21 254 1.8E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 SUPERFAMILY SSF52540 22 247 1.01E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 PANTHER PTHR24220 25 398 2.0E-164 T 14-09-2016 AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 SUPERFAMILY SSF52540 257 502 2.24E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 Pfam PF00005 ABC transporter 289 443 2.1E-20 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 Pfam PF00005 ABC transporter 39 189 3.2E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20480 76a88754fd7a259e03e3d8055f3d2997 513 PANTHER PTHR24220:SF416 25 398 2.0E-164 T 14-09-2016 AMK01_RS10060 64a1baecb3bb221368ad31b4abc3a798 320 PANTHER PTHR31752 100 311 2.3E-25 T 14-09-2016 AMK01_RS10060 64a1baecb3bb221368ad31b4abc3a798 320 Pfam PF03547 Membrane transport protein 164 306 2.4E-17 T 14-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK01_RS10060 64a1baecb3bb221368ad31b4abc3a798 320 Pfam PF03547 Membrane transport protein 5 112 9.3E-9 T 14-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK01_RS10105 ef896c9a0801457a53644110f965f54b 504 PANTHER PTHR35369:SF2 3 499 1.5E-71 T 14-09-2016 AMK01_RS10105 ef896c9a0801457a53644110f965f54b 504 SUPERFAMILY SSF56672 4 233 8.72E-34 T 14-09-2016 AMK01_RS10105 ef896c9a0801457a53644110f965f54b 504 PANTHER PTHR35369 3 499 1.5E-71 T 14-09-2016 AMK01_RS08115 52177f3c2b1b53233b96cefd37ecd6b6 386 PANTHER PTHR10371 16 216 4.6E-82 T 14-09-2016 AMK01_RS08115 52177f3c2b1b53233b96cefd37ecd6b6 386 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 172 1.5E-58 T 14-09-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK01_RS08115 52177f3c2b1b53233b96cefd37ecd6b6 386 Gene3D G3DSA:3.40.30.10 93 171 2.6E-13 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS08115 52177f3c2b1b53233b96cefd37ecd6b6 386 Gene3D G3DSA:1.10.150.20 309 342 1.5E-4 T 14-09-2016 AMK01_RS08115 52177f3c2b1b53233b96cefd37ecd6b6 386 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 172 2.1E-54 T 14-09-2016 AMK01_RS08115 52177f3c2b1b53233b96cefd37ecd6b6 386 SUPERFAMILY SSF52833 18 175 3.91E-51 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS15240 ce24dc2195de2208dd1b99f6b15c631f 266 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 8 243 2.2E-76 T 14-09-2016 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 AMK01_RS15240 ce24dc2195de2208dd1b99f6b15c631f 266 SUPERFAMILY SSF56112 22 248 2.19E-28 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS15240 ce24dc2195de2208dd1b99f6b15c631f 266 Gene3D G3DSA:3.90.1200.10 92 209 2.1E-4 T 14-09-2016 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 PANTHER PTHR34933 30 238 2.5E-49 T 14-09-2016 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 PRINTS PR01008 Flagellar L-ring protein signature 80 92 1.1E-32 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 PRINTS PR01008 Flagellar L-ring protein signature 152 167 1.1E-32 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 PRINTS PR01008 Flagellar L-ring protein signature 199 213 1.1E-32 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 PRINTS PR01008 Flagellar L-ring protein signature 215 229 1.1E-32 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 PRINTS PR01008 Flagellar L-ring protein signature 178 194 1.1E-32 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 PANTHER PTHR34933:SF1 30 238 2.5E-49 T 14-09-2016 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 Pfam PF02107 Flagellar L-ring protein 60 237 1.3E-54 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK01_RS03520 611f5bd55b6b5c6843108a0e7183599b 238 Hamap MF_00415 Flagellar L-ring protein [flgH]. 3 236 25.173 T 14-09-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AMK01_RS06160 6af42a02e9f250ed7975f1aaf13b4081 277 PANTHER PTHR23090:SF7 8 274 3.8E-127 T 14-09-2016 AMK01_RS06160 6af42a02e9f250ed7975f1aaf13b4081 277 PANTHER PTHR23090 8 274 3.8E-127 T 14-09-2016 AMK01_RS06160 6af42a02e9f250ed7975f1aaf13b4081 277 Pfam PF02540 NAD synthase 27 271 8.2E-60 T 14-09-2016 IPR022310 NAD/GMP synthase AMK01_RS06160 6af42a02e9f250ed7975f1aaf13b4081 277 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 21 274 31.117 T 14-09-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 AMK01_RS06160 6af42a02e9f250ed7975f1aaf13b4081 277 SUPERFAMILY SSF52402 8 272 3.94E-76 T 14-09-2016 AMK01_RS06160 6af42a02e9f250ed7975f1aaf13b4081 277 Gene3D G3DSA:3.40.50.620 8 274 6.0E-68 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS06160 6af42a02e9f250ed7975f1aaf13b4081 277 TIGRFAM TIGR00552 nadE: NAD+ synthetase 23 274 2.3E-63 T 14-09-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 PANTHER PTHR11935:SF110 112 421 7.5E-82 T 14-09-2016 AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 SUPERFAMILY SSF52799 6 98 1.67E-6 T 14-09-2016 IPR029021 Protein-tyrosine phosphatase-like AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 6 133 1.3E-31 T 14-09-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 PANTHER PTHR11935 112 421 7.5E-82 T 14-09-2016 AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 SMART SM00849 156 345 2.6E-22 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 Gene3D G3DSA:3.60.15.10 149 388 2.1E-48 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 Pfam PF00753 Metallo-beta-lactamase superfamily 167 345 4.8E-22 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 Gene3D G3DSA:3.90.190.10 4 139 2.2E-42 T 14-09-2016 IPR029021 Protein-tyrosine phosphatase-like AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 Pfam PF04273 Putative phosphatase (DUF442) 4 110 2.7E-45 T 14-09-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMK01_RS13460 0549e2894741ef2b4b6899a1c0ab49c3 426 SUPERFAMILY SSF56281 156 389 5.01E-44 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 SUPERFAMILY SSF55103 227 474 9.48E-60 T 14-09-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 Gene3D G3DSA:3.30.43.10 7 100 1.3E-19 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 SUPERFAMILY SSF56176 9 223 1.02E-66 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 Gene3D G3DSA:3.30.465.10 102 223 3.3E-34 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 PANTHER PTHR11748:SF76 9 478 7.4E-187 T 14-09-2016 AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 Gene3D G3DSA:1.10.45.10 434 473 5.9E-14 T 14-09-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 473 4.5E-56 T 14-09-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 PANTHER PTHR11748 9 478 7.4E-187 T 14-09-2016 AMK01_RS04575 21849397897fc883b0721a0be65fa993 478 Pfam PF01565 FAD binding domain 48 183 7.7E-32 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS08225 770dd5f1660dc53273a5ea3fb4c87b59 195 SUPERFAMILY SSF55729 4 185 2.3E-12 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS08225 770dd5f1660dc53273a5ea3fb4c87b59 195 Gene3D G3DSA:3.40.630.30 39 190 2.0E-13 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS26275 3df0b923932e97b978c17004c64059a3 64 PANTHER PTHR30622 1 63 3.6E-29 T 14-09-2016 AMK01_RS26275 3df0b923932e97b978c17004c64059a3 64 PANTHER PTHR30622:SF3 1 63 3.6E-29 T 14-09-2016 AMK01_RS26275 3df0b923932e97b978c17004c64059a3 64 Pfam PF02673 Bacitracin resistance protein BacA 1 63 5.9E-24 T 14-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMK01_RS02900 8177ff014520d76278ae357d1b98a430 210 PANTHER PTHR33545 5 207 1.2E-48 T 14-09-2016 AMK01_RS02900 8177ff014520d76278ae357d1b98a430 210 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 26 197 2.1E-25 T 14-09-2016 IPR003740 Uncharacterised membrane protein YitT AMK01_RS15995 56763b8856cf11effd432300cd420e86 166 SUPERFAMILY SSF158694 2 163 1.7E-51 T 14-09-2016 AMK01_RS15995 56763b8856cf11effd432300cd420e86 166 Pfam PF09349 OHCU decarboxylase 2 158 8.5E-39 T 14-09-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 AMK01_RS15995 56763b8856cf11effd432300cd420e86 166 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 3 161 2.9E-60 T 14-09-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 AMK01_RS15995 56763b8856cf11effd432300cd420e86 166 Gene3D G3DSA:1.10.3330.10 2 163 1.1E-56 T 14-09-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 AMK01_RS05125 ad96fa2582b43bb200f953234be44ea9 226 Pfam PF00578 AhpC/TSA family 11 195 5.3E-18 T 14-09-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS05125 ad96fa2582b43bb200f953234be44ea9 226 SUPERFAMILY SSF52833 173 205 5.62E-22 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05125 ad96fa2582b43bb200f953234be44ea9 226 SUPERFAMILY SSF52833 8 115 5.62E-22 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05125 ad96fa2582b43bb200f953234be44ea9 226 Gene3D G3DSA:3.40.30.10 181 201 3.9E-21 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05125 ad96fa2582b43bb200f953234be44ea9 226 Gene3D G3DSA:3.40.30.10 10 111 3.9E-21 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS01955 e9d72b7e0a0fe02d506ede94d5448539 257 SUPERFAMILY SSF52096 1 257 1.61E-92 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS01955 e9d72b7e0a0fe02d506ede94d5448539 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 256 1.5E-84 T 14-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK01_RS01955 e9d72b7e0a0fe02d506ede94d5448539 257 PANTHER PTHR11941:SF54 1 254 6.9E-128 T 14-09-2016 AMK01_RS01955 e9d72b7e0a0fe02d506ede94d5448539 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 14-09-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AMK01_RS01955 e9d72b7e0a0fe02d506ede94d5448539 257 Gene3D G3DSA:3.90.226.10 1 255 3.3E-102 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS01955 e9d72b7e0a0fe02d506ede94d5448539 257 PANTHER PTHR11941 1 254 6.9E-128 T 14-09-2016 AMK01_RS01175 e5fc655e75567b4edf5c2c8cd256743d 271 SMART SM00858 46 114 3.2E-11 T 14-09-2016 IPR013974 SAF domain AMK01_RS01175 e5fc655e75567b4edf5c2c8cd256743d 271 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 240 1.7E-68 T 14-09-2016 IPR017592 Pilus assembly, Flp-type CpaB AMK01_RS01175 e5fc655e75567b4edf5c2c8cd256743d 271 Pfam PF08666 SAF domain 46 113 1.8E-6 T 14-09-2016 IPR013974 SAF domain AMK01_RS01175 e5fc655e75567b4edf5c2c8cd256743d 271 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 121 226 2.6E-28 T 14-09-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AMK01_RS00140 f93ea3af7c7cc8ae5a7d09677e450fd8 1064 Pfam PF12705 PD-(D/E)XK nuclease superfamily 782 1013 1.1E-21 T 14-09-2016 AMK01_RS00140 f93ea3af7c7cc8ae5a7d09677e450fd8 1064 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 8 1053 0.0 T 14-09-2016 IPR014153 Double-strand break repair protein AddB AMK01_RS00140 f93ea3af7c7cc8ae5a7d09677e450fd8 1064 SUPERFAMILY SSF52540 362 759 2.12E-36 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12395 2e4c840834b11fe7e263a81ad346170d 158 PANTHER PTHR36929 3 157 5.2E-17 T 14-09-2016 AMK01_RS12395 2e4c840834b11fe7e263a81ad346170d 158 SUPERFAMILY SSF55961 7 152 9.46E-32 T 14-09-2016 AMK01_RS12395 2e4c840834b11fe7e263a81ad346170d 158 PANTHER PTHR36929:SF1 3 157 5.2E-17 T 14-09-2016 AMK01_RS12395 2e4c840834b11fe7e263a81ad346170d 158 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 19 150 3.5E-19 T 14-09-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AMK01_RS12395 2e4c840834b11fe7e263a81ad346170d 158 Gene3D G3DSA:3.30.530.20 2 153 4.9E-30 T 14-09-2016 IPR023393 START-like domain AMK01_RS13325 38b04def8ee987d42f845e7d4c9f89c2 309 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 307 2.3E-51 T 14-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMK01_RS13325 38b04def8ee987d42f845e7d4c9f89c2 309 PIRSF PIRSF001439 2 309 1.7E-57 T 14-09-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMK01_RS13325 38b04def8ee987d42f845e7d4c9f89c2 309 PANTHER PTHR13812 2 305 2.4E-37 T 14-09-2016 AMK01_RS13325 38b04def8ee987d42f845e7d4c9f89c2 309 PANTHER PTHR13812:SF19 2 305 2.4E-37 T 14-09-2016 AMK01_RS13325 38b04def8ee987d42f845e7d4c9f89c2 309 Gene3D G3DSA:3.40.50.720 134 290 3.5E-46 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13325 38b04def8ee987d42f845e7d4c9f89c2 309 Gene3D G3DSA:3.30.1780.10 6 133 1.7E-23 T 14-09-2016 IPR023401 Ornithine cyclodeaminase, N-terminal AMK01_RS13325 38b04def8ee987d42f845e7d4c9f89c2 309 SUPERFAMILY SSF51735 16 306 2.98E-65 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17540 0430dbaabe8b7c13e0c7be7823d37728 188 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 14 153 27.273 T 14-09-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AMK01_RS17540 0430dbaabe8b7c13e0c7be7823d37728 188 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 24 145 1.7E-49 T 14-09-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AMK01_RS17540 0430dbaabe8b7c13e0c7be7823d37728 188 Pfam PF12838 4Fe-4S dicluster domain 67 121 1.7E-9 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK01_RS17540 0430dbaabe8b7c13e0c7be7823d37728 188 Gene3D G3DSA:3.30.70.20 61 125 6.3E-16 T 14-09-2016 AMK01_RS17540 0430dbaabe8b7c13e0c7be7823d37728 188 SUPERFAMILY SSF54862 44 144 2.09E-22 T 14-09-2016 AMK01_RS17540 0430dbaabe8b7c13e0c7be7823d37728 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 107 118 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS17540 0430dbaabe8b7c13e0c7be7823d37728 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS17540 0430dbaabe8b7c13e0c7be7823d37728 188 PANTHER PTHR10849 16 147 1.2E-41 T 14-09-2016 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 Pfam PF03459 TOBE domain 293 352 1.7E-13 T 14-09-2016 IPR005116 Transport-associated OB, type 1 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 PANTHER PTHR24220 1 225 3.4E-102 T 14-09-2016 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 PANTHER PTHR24220 255 295 3.4E-102 T 14-09-2016 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 PANTHER PTHR24220:SF284 1 225 3.4E-102 T 14-09-2016 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 PANTHER PTHR24220:SF284 255 295 3.4E-102 T 14-09-2016 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 353 5.7E-143 T 14-09-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 Gene3D G3DSA:3.40.50.300 23 227 3.6E-62 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 Pfam PF00005 ABC transporter 22 160 4.2E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 SUPERFAMILY SSF52540 11 227 5.8E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 Gene3D G3DSA:2.40.50.100 280 349 4.8E-17 T 14-09-2016 AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 SMART SM00382 23 210 1.5E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20925 6fa243cb2d2a64ec7fbaf7f7cfc2bb07 355 SUPERFAMILY SSF50331 236 352 3.93E-20 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS21080 40bd55e8ec2cdeef3deb6a9247165368 213 SUPERFAMILY SSF53056 5 209 1.19E-62 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS21080 40bd55e8ec2cdeef3deb6a9247165368 213 Gene3D G3DSA:3.40.1050.10 4 209 7.8E-66 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS21080 40bd55e8ec2cdeef3deb6a9247165368 213 SMART SM00947 32 202 1.3E-66 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS21080 40bd55e8ec2cdeef3deb6a9247165368 213 PANTHER PTHR11002 8 209 3.5E-61 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS21080 40bd55e8ec2cdeef3deb6a9247165368 213 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 89 109 - T 14-09-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS21080 40bd55e8ec2cdeef3deb6a9247165368 213 Pfam PF00484 Carbonic anhydrase 39 198 3.4E-49 T 14-09-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK01_RS11615 2b3cfb9a5967f4363c49d4a43a5a5998 164 Pfam PF01613 Flavin reductase like domain 16 164 1.4E-25 T 14-09-2016 IPR002563 Flavin reductase like domain GO:0010181 AMK01_RS11615 2b3cfb9a5967f4363c49d4a43a5a5998 164 PANTHER PTHR30466 5 164 1.4E-35 T 14-09-2016 AMK01_RS11615 2b3cfb9a5967f4363c49d4a43a5a5998 164 PANTHER PTHR30466:SF2 5 164 1.4E-35 T 14-09-2016 AMK01_RS11615 2b3cfb9a5967f4363c49d4a43a5a5998 164 Gene3D G3DSA:2.30.110.10 12 164 4.3E-44 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS11615 2b3cfb9a5967f4363c49d4a43a5a5998 164 SUPERFAMILY SSF50475 7 164 7.85E-42 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS11615 2b3cfb9a5967f4363c49d4a43a5a5998 164 SMART SM00903 16 163 8.7E-45 T 14-09-2016 IPR002563 Flavin reductase like domain GO:0010181 AMK01_RS15435 34cf0865f89c3443c5a2dae0548677ff 237 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 232 4.2E-20 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS15435 34cf0865f89c3443c5a2dae0548677ff 237 Gene3D G3DSA:3.40.190.10 105 182 4.1E-4 T 14-09-2016 AMK01_RS15435 34cf0865f89c3443c5a2dae0548677ff 237 PANTHER PTHR38834 4 227 1.7E-37 T 14-09-2016 AMK01_RS15435 34cf0865f89c3443c5a2dae0548677ff 237 SMART SM00062 20 234 0.0034 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS15435 34cf0865f89c3443c5a2dae0548677ff 237 SUPERFAMILY SSF53850 17 231 2.8E-34 T 14-09-2016 AMK01_RS15435 34cf0865f89c3443c5a2dae0548677ff 237 Gene3D G3DSA:3.40.190.10 20 103 9.6E-14 T 14-09-2016 AMK01_RS15435 34cf0865f89c3443c5a2dae0548677ff 237 Gene3D G3DSA:3.40.190.10 193 232 9.6E-14 T 14-09-2016 AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 Gene3D G3DSA:2.40.50.140 258 318 5.6E-16 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 PANTHER PTHR24220 5 267 7.1E-165 T 14-09-2016 AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 SUPERFAMILY SSF52540 4 242 8.34E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 SMART SM00382 28 211 8.5E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 SUPERFAMILY SSF50331 236 329 3.89E-22 T 14-09-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 PANTHER PTHR24220:SF319 5 267 7.1E-165 T 14-09-2016 AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 Pfam PF00005 ABC transporter 22 161 2.5E-31 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 Gene3D G3DSA:3.40.50.300 3 234 5.1E-76 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19010 310157301abf275a84ae391cb575dee9 332 Pfam PF03459 TOBE domain 269 323 1.4E-10 T 14-09-2016 IPR005116 Transport-associated OB, type 1 AMK01_RS01645 302f4e049b794f38aa2a675748fa84bf 181 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 41 179 1.2E-44 T 14-09-2016 IPR005247 YbhB/YbcL AMK01_RS01645 302f4e049b794f38aa2a675748fa84bf 181 PANTHER PTHR30289 21 181 1.6E-76 T 14-09-2016 AMK01_RS01645 302f4e049b794f38aa2a675748fa84bf 181 SUPERFAMILY SSF49777 23 180 1.7E-51 T 14-09-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK01_RS01645 302f4e049b794f38aa2a675748fa84bf 181 Gene3D G3DSA:3.90.280.10 22 181 5.0E-58 T 14-09-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK01_RS01645 302f4e049b794f38aa2a675748fa84bf 181 PANTHER PTHR30289:SF0 21 181 1.6E-76 T 14-09-2016 AMK01_RS01645 302f4e049b794f38aa2a675748fa84bf 181 Pfam PF01161 Phosphatidylethanolamine-binding protein 45 179 2.8E-37 T 14-09-2016 IPR008914 Phosphatidylethanolamine-binding protein AMK01_RS13805 c40014e01a96ce8561486c5a2a71edf3 162 PANTHER PTHR11803 13 162 4.3E-33 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS13805 c40014e01a96ce8561486c5a2a71edf3 162 Gene3D G3DSA:3.30.1330.40 12 160 6.5E-51 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS13805 c40014e01a96ce8561486c5a2a71edf3 162 PANTHER PTHR11803:SF2 13 162 4.3E-33 T 14-09-2016 AMK01_RS13805 c40014e01a96ce8561486c5a2a71edf3 162 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 13 159 3.1E-26 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS13805 c40014e01a96ce8561486c5a2a71edf3 162 SUPERFAMILY SSF55298 12 160 2.51E-46 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS20270 f3a381a214bedd72a00a5e24711db11f 215 PANTHER PTHR24220 4 203 3.2E-66 T 14-09-2016 AMK01_RS20270 f3a381a214bedd72a00a5e24711db11f 215 SMART SM00382 27 204 2.9E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20270 f3a381a214bedd72a00a5e24711db11f 215 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 3 203 4.4E-77 T 14-09-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AMK01_RS20270 f3a381a214bedd72a00a5e24711db11f 215 PANTHER PTHR24220:SF508 4 203 3.2E-66 T 14-09-2016 AMK01_RS20270 f3a381a214bedd72a00a5e24711db11f 215 SUPERFAMILY SSF52540 3 192 8.52E-38 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20270 f3a381a214bedd72a00a5e24711db11f 215 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20270 f3a381a214bedd72a00a5e24711db11f 215 Gene3D G3DSA:3.40.50.300 4 192 1.4E-39 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20270 f3a381a214bedd72a00a5e24711db11f 215 Pfam PF00005 ABC transporter 20 161 5.5E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS05945 c020fcd004a030e60693e2ce136a5e61 221 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 90 4.4E-8 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS05945 c020fcd004a030e60693e2ce136a5e61 221 SUPERFAMILY SSF47616 82 213 1.27E-24 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS05945 c020fcd004a030e60693e2ce136a5e61 221 Gene3D G3DSA:3.40.30.10 1 88 7.9E-21 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05945 c020fcd004a030e60693e2ce136a5e61 221 Gene3D G3DSA:1.20.1050.10 89 211 5.0E-24 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS05945 c020fcd004a030e60693e2ce136a5e61 221 SUPERFAMILY SSF52833 1 89 1.68E-15 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05945 c020fcd004a030e60693e2ce136a5e61 221 Pfam PF00043 Glutathione S-transferase, C-terminal domain 141 205 8.0E-13 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AMK01_RS05945 c020fcd004a030e60693e2ce136a5e61 221 PANTHER PTHR11260 2 209 1.3E-32 T 14-09-2016 AMK01_RS02645 88c850281d776482632933248b90fc56 329 Gene3D G3DSA:3.40.50.2300 36 146 2.6E-20 T 14-09-2016 AMK01_RS02645 88c850281d776482632933248b90fc56 329 PANTHER PTHR32196 8 306 1.5E-44 T 14-09-2016 AMK01_RS02645 88c850281d776482632933248b90fc56 329 SUPERFAMILY SSF53822 34 324 5.62E-67 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS02645 88c850281d776482632933248b90fc56 329 PANTHER PTHR32196:SF14 8 306 1.5E-44 T 14-09-2016 AMK01_RS02645 88c850281d776482632933248b90fc56 329 Pfam PF13407 Periplasmic binding protein domain 37 298 8.8E-52 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS02645 88c850281d776482632933248b90fc56 329 Gene3D G3DSA:3.40.50.2300 147 307 2.1E-44 T 14-09-2016 AMK01_RS02790 292ac342980c4924b4f905de8dff0332 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 362 6.2E-59 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS02790 292ac342980c4924b4f905de8dff0332 372 Gene3D G3DSA:2.40.50.100 177 208 4.9E-14 T 14-09-2016 AMK01_RS02790 292ac342980c4924b4f905de8dff0332 372 Gene3D G3DSA:2.40.50.100 72 101 4.9E-14 T 14-09-2016 AMK01_RS02790 292ac342980c4924b4f905de8dff0332 372 SUPERFAMILY SSF111369 57 283 3.27E-17 T 14-09-2016 AMK01_RS02790 292ac342980c4924b4f905de8dff0332 372 PANTHER PTHR30469 1 372 6.3E-52 T 14-09-2016 AMK01_RS02790 292ac342980c4924b4f905de8dff0332 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 269 1.2E-13 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS10090 84342716365183fe61045e1825b96435 582 Gene3D G3DSA:3.40.50.300 12 368 2.8E-28 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS10090 84342716365183fe61045e1825b96435 582 Pfam PF13175 AAA ATPase domain 12 61 3.4E-11 T 14-09-2016 AMK01_RS10090 84342716365183fe61045e1825b96435 582 Pfam PF13175 AAA ATPase domain 191 349 2.2E-19 T 14-09-2016 AMK01_RS10090 84342716365183fe61045e1825b96435 582 SUPERFAMILY SSF52540 12 355 4.42E-22 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03200 ec4beb137b24e2f46fd9df8182b2a451 130 Gene3D G3DSA:3.30.1330.40 6 129 9.1E-41 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS03200 ec4beb137b24e2f46fd9df8182b2a451 130 Pfam PF01042 Endoribonuclease L-PSP 14 127 7.5E-29 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS03200 ec4beb137b24e2f46fd9df8182b2a451 130 SUPERFAMILY SSF55298 6 129 2.51E-36 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS03200 ec4beb137b24e2f46fd9df8182b2a451 130 PANTHER PTHR11803 1 129 9.9E-66 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS03200 ec4beb137b24e2f46fd9df8182b2a451 130 PANTHER PTHR11803:SF6 1 129 9.9E-66 T 14-09-2016 AMK01_RS18610 c6eb7099cba01dc2a9f0919de3280c28 536 PANTHER PTHR11920:SF341 221 494 3.2E-90 T 14-09-2016 AMK01_RS18610 c6eb7099cba01dc2a9f0919de3280c28 536 Pfam PF11845 Protein of unknown function (DUF3365) 19 202 1.1E-22 T 14-09-2016 IPR021796 Protein of unknown function DUF3365 AMK01_RS18610 c6eb7099cba01dc2a9f0919de3280c28 536 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 285 469 4.8E-33 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18610 c6eb7099cba01dc2a9f0919de3280c28 536 SMART SM00044 257 454 4.8E-18 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18610 c6eb7099cba01dc2a9f0919de3280c28 536 Gene3D G3DSA:3.30.70.1230 286 470 2.0E-48 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS18610 c6eb7099cba01dc2a9f0919de3280c28 536 SUPERFAMILY SSF55073 284 471 1.73E-55 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS18610 c6eb7099cba01dc2a9f0919de3280c28 536 PANTHER PTHR11920 221 494 3.2E-90 T 14-09-2016 AMK01_RS12935 07486480c94430159ed2b00514dec592 840 PANTHER PTHR30347:SF3 261 819 1.2E-89 T 14-09-2016 AMK01_RS12935 07486480c94430159ed2b00514dec592 840 SUPERFAMILY SSF50182 630 696 7.19E-16 T 14-09-2016 IPR010920 LSM domain AMK01_RS12935 07486480c94430159ed2b00514dec592 840 SUPERFAMILY SSF82861 545 629 2.09E-10 T 14-09-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMK01_RS12935 07486480c94430159ed2b00514dec592 840 Gene3D G3DSA:3.30.70.100 702 785 3.4E-20 T 14-09-2016 AMK01_RS12935 07486480c94430159ed2b00514dec592 840 Pfam PF00924 Mechanosensitive ion channel 592 787 3.5E-48 T 14-09-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK01_RS12935 07486480c94430159ed2b00514dec592 840 PANTHER PTHR30347 261 819 1.2E-89 T 14-09-2016 AMK01_RS12935 07486480c94430159ed2b00514dec592 840 Gene3D G3DSA:2.30.30.60 646 695 1.0E-14 T 14-09-2016 AMK01_RS12935 07486480c94430159ed2b00514dec592 840 SUPERFAMILY SSF82689 698 797 6.93E-26 T 14-09-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK01_RS10485 5813c67b16e86b5483048c5d140d533e 213 Pfam PF06283 Trehalose utilisation 4 211 7.7E-40 T 14-09-2016 IPR029010 ThuA-like domain AMK01_RS10485 5813c67b16e86b5483048c5d140d533e 213 Gene3D G3DSA:3.40.50.880 5 213 8.9E-50 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS10485 5813c67b16e86b5483048c5d140d533e 213 SUPERFAMILY SSF52317 4 213 6.1E-43 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS15740 ee48300eb6a7b88c029979a60a3b5a01 304 Pfam PF13487 HD domain 189 250 1.8E-12 T 14-09-2016 AMK01_RS15740 ee48300eb6a7b88c029979a60a3b5a01 304 SMART SM00471 133 269 4.2E-7 T 14-09-2016 IPR003607 HD/PDEase domain AMK01_RS15740 ee48300eb6a7b88c029979a60a3b5a01 304 Pfam PF11871 Domain of unknown function (DUF3391) 2 104 3.1E-12 T 14-09-2016 IPR021812 Protein of unknown function DUF3391 AMK01_RS15740 ee48300eb6a7b88c029979a60a3b5a01 304 SUPERFAMILY SSF109604 128 291 1.59E-26 T 14-09-2016 AMK01_RS15740 ee48300eb6a7b88c029979a60a3b5a01 304 Gene3D G3DSA:1.10.3210.10 132 273 4.1E-16 T 14-09-2016 IPR006674 HD domain AMK01_RS10775 74cd882c6f490731f591995daaa6e8f7 220 Pfam PF06776 Invasion associated locus B (IalB) protein 53 180 2.4E-34 T 14-09-2016 IPR010642 Invasion protein B AMK01_RS06990 58c541a78e3cc81417c9c564a5fcd46a 405 Gene3D G3DSA:3.90.1150.10 262 388 1.4E-25 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS06990 58c541a78e3cc81417c9c564a5fcd46a 405 Gene3D G3DSA:3.40.640.10 8 260 7.9E-84 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS06990 58c541a78e3cc81417c9c564a5fcd46a 405 SUPERFAMILY SSF53383 8 387 3.44E-109 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS06990 58c541a78e3cc81417c9c564a5fcd46a 405 PANTHER PTHR30244 1 389 1.5E-123 T 14-09-2016 AMK01_RS06990 58c541a78e3cc81417c9c564a5fcd46a 405 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 383 3.1E-113 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS06990 58c541a78e3cc81417c9c564a5fcd46a 405 PANTHER PTHR30244:SF16 1 389 1.5E-123 T 14-09-2016 AMK01_RS06990 58c541a78e3cc81417c9c564a5fcd46a 405 PIRSF PIRSF000390 4 390 8.0E-110 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS00980 a517b3fc5a828d00b74b26bddde3216a 368 PIRSF PIRSF007313 1 362 9.1E-158 T 14-09-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AMK01_RS00980 a517b3fc5a828d00b74b26bddde3216a 368 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 352 1.4E-161 T 14-09-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AMK01_RS12610 0990d0cd5f58e5998eecbe7b96b27ef9 179 Gene3D G3DSA:3.40.50.300 3 171 2.6E-21 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12610 0990d0cd5f58e5998eecbe7b96b27ef9 179 SUPERFAMILY SSF52540 3 166 1.29E-14 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12610 0990d0cd5f58e5998eecbe7b96b27ef9 179 Pfam PF13521 AAA domain 5 166 2.3E-41 T 14-09-2016 AMK01_RS17595 966157069bf1fb250d821348a7641be5 231 Pfam PF00156 Phosphoribosyl transferase domain 61 185 6.8E-14 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK01_RS17595 966157069bf1fb250d821348a7641be5 231 Gene3D G3DSA:3.40.50.2020 46 191 4.2E-23 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS17595 966157069bf1fb250d821348a7641be5 231 SUPERFAMILY SSF53271 52 200 8.92E-19 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS17595 966157069bf1fb250d821348a7641be5 231 PANTHER PTHR19278 133 199 2.2E-17 T 14-09-2016 AMK01_RS17595 966157069bf1fb250d821348a7641be5 231 PANTHER PTHR19278 61 116 2.2E-17 T 14-09-2016 AMK01_RS13750 81f52468a544ac446bbd7a28340c8791 412 SUPERFAMILY SSF103473 5 401 9.94E-35 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS13750 81f52468a544ac446bbd7a28340c8791 412 PANTHER PTHR23513 1 412 3.3E-54 T 14-09-2016 AMK01_RS13750 81f52468a544ac446bbd7a28340c8791 412 Gene3D G3DSA:1.20.1250.20 17 189 1.8E-12 T 14-09-2016 AMK01_RS13750 81f52468a544ac446bbd7a28340c8791 412 Pfam PF07690 Major Facilitator Superfamily 16 358 3.5E-22 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS13750 81f52468a544ac446bbd7a28340c8791 412 Gene3D G3DSA:1.20.1250.20 224 397 1.2E-13 T 14-09-2016 AMK01_RS18875 49a10d15f45106a97922f27cbd58d87d 249 PANTHER PTHR30060:SF1 3 246 1.2E-98 T 14-09-2016 AMK01_RS18875 49a10d15f45106a97922f27cbd58d87d 249 Pfam PF03741 Integral membrane protein TerC family 18 209 7.4E-54 T 14-09-2016 IPR005496 Integral membrane protein TerC GO:0016021 AMK01_RS18875 49a10d15f45106a97922f27cbd58d87d 249 PANTHER PTHR30060 3 246 1.2E-98 T 14-09-2016 AMK01_RS12140 07f791cbd4314ba953ccf6d3aae3f86a 94 PANTHER PTHR10029 1 92 7.4E-28 T 14-09-2016 AMK01_RS12140 07f791cbd4314ba953ccf6d3aae3f86a 94 Pfam PF00708 Acylphosphatase 6 92 1.8E-25 T 14-09-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMK01_RS12140 07f791cbd4314ba953ccf6d3aae3f86a 94 Gene3D G3DSA:3.30.70.100 7 92 3.1E-29 T 14-09-2016 AMK01_RS12140 07f791cbd4314ba953ccf6d3aae3f86a 94 SUPERFAMILY SSF54975 6 92 3.92E-26 T 14-09-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMK01_RS12140 07f791cbd4314ba953ccf6d3aae3f86a 94 ProSitePatterns PS00150 Acylphosphatase signature 1. 12 22 - T 14-09-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMK01_RS12140 07f791cbd4314ba953ccf6d3aae3f86a 94 ProSitePatterns PS00151 Acylphosphatase signature 2. 36 52 - T 14-09-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMK01_RS12140 07f791cbd4314ba953ccf6d3aae3f86a 94 PRINTS PR00112 Acylphosphatase signature 28 53 4.2E-8 T 14-09-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMK01_RS12140 07f791cbd4314ba953ccf6d3aae3f86a 94 PRINTS PR00112 Acylphosphatase signature 7 22 4.2E-8 T 14-09-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 PANTHER PTHR19211:SF7 1 549 0.0 T 14-09-2016 AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 Gene3D G3DSA:3.40.50.300 315 528 5.3E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 SUPERFAMILY SSF52540 9 236 1.2E-50 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 Pfam PF00005 ABC transporter 22 185 3.3E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 Pfam PF00005 ABC transporter 334 467 4.0E-24 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 4 547 3.0E-276 T 14-09-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 PANTHER PTHR19211 1 549 0.0 T 14-09-2016 AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 Gene3D G3DSA:3.40.50.300 9 282 2.4E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 SMART SM00382 31 239 1.9E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 SMART SM00382 342 512 8.0E-13 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 SUPERFAMILY SSF52540 304 520 5.06E-47 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 Pfam PF12848 ABC transporter 224 299 5.4E-15 T 14-09-2016 IPR032781 ABC-transporter extension domain AMK01_RS14750 7c8bc77316a5f40bc7481c9259546cef 549 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12440 f787e24f7a2a8683884594c2a6866dae 227 Gene3D G3DSA:1.25.40.290 114 186 5.1E-11 T 14-09-2016 AMK01_RS12440 f787e24f7a2a8683884594c2a6866dae 227 Pfam PF08713 DNA alkylation repair enzyme 12 217 5.8E-35 T 14-09-2016 IPR014825 DNA alkylation repair enzyme AMK01_RS12440 f787e24f7a2a8683884594c2a6866dae 227 SUPERFAMILY SSF48371 10 193 4.39E-42 T 14-09-2016 IPR016024 Armadillo-type fold GO:0005488 AMK01_RS18235 16fa241bbb9b0254b50ba8b1153fd0c7 41 PANTHER PTHR18804:SF11 1 41 3.4E-14 T 14-09-2016 AMK01_RS18235 16fa241bbb9b0254b50ba8b1153fd0c7 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 8.3E-6 T 14-09-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18235 16fa241bbb9b0254b50ba8b1153fd0c7 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.265 T 14-09-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18235 16fa241bbb9b0254b50ba8b1153fd0c7 41 SUPERFAMILY SSF57840 1 41 8.11E-13 T 14-09-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18235 16fa241bbb9b0254b50ba8b1153fd0c7 41 PANTHER PTHR18804 1 41 3.4E-14 T 14-09-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS18235 16fa241bbb9b0254b50ba8b1153fd0c7 41 Pfam PF00444 Ribosomal protein L36 1 41 2.7E-16 T 14-09-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS10210 76cfa6f94782ca265fbea38009b9bf6f 425 Pfam PF14281 PD-(D/E)XK nuclease superfamily 41 166 4.7E-27 T 14-09-2016 IPR029470 PD-(D/E)XK nuclease superfamily 4 AMK01_RS17035 1e2981e2b70661c97d45bc42738b961a 251 SMART SM00382 35 249 2.8E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17035 1e2981e2b70661c97d45bc42738b961a 251 Gene3D G3DSA:3.40.50.300 8 246 3.5E-57 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17035 1e2981e2b70661c97d45bc42738b961a 251 Pfam PF00005 ABC transporter 26 181 1.6E-30 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17035 1e2981e2b70661c97d45bc42738b961a 251 PANTHER PTHR24220:SF366 12 251 4.2E-126 T 14-09-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AMK01_RS17035 1e2981e2b70661c97d45bc42738b961a 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 250 7.5E-5 T 14-09-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK01_RS17035 1e2981e2b70661c97d45bc42738b961a 251 SUPERFAMILY SSF52540 10 249 1.11E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17035 1e2981e2b70661c97d45bc42738b961a 251 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 10 251 5.0E-116 T 14-09-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AMK01_RS17035 1e2981e2b70661c97d45bc42738b961a 251 PANTHER PTHR24220 12 251 4.2E-126 T 14-09-2016 AMK01_RS10475 0c96995f61ba2de87472861fd8cf419b 265 PANTHER PTHR35005:SF1 1 265 3.9E-44 T 14-09-2016 AMK01_RS10475 0c96995f61ba2de87472861fd8cf419b 265 Pfam PF02633 Creatinine amidohydrolase 10 250 2.9E-60 T 14-09-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK01_RS10475 0c96995f61ba2de87472861fd8cf419b 265 Gene3D G3DSA:3.40.50.10310 5 255 5.9E-74 T 14-09-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK01_RS10475 0c96995f61ba2de87472861fd8cf419b 265 SUPERFAMILY SSF102215 5 254 2.88E-67 T 14-09-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK01_RS10475 0c96995f61ba2de87472861fd8cf419b 265 PANTHER PTHR35005 1 265 3.9E-44 T 14-09-2016 AMK01_RS11740 a2d01df458adc01aff6033dccdfccd96 257 SUPERFAMILY SSF52540 15 249 4.56E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11740 a2d01df458adc01aff6033dccdfccd96 257 PANTHER PTHR24220:SF474 17 256 2.4E-164 T 14-09-2016 AMK01_RS11740 a2d01df458adc01aff6033dccdfccd96 257 Gene3D G3DSA:3.40.50.300 14 250 1.1E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11740 a2d01df458adc01aff6033dccdfccd96 257 PIRSF PIRSF039085 12 255 1.1E-107 T 14-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK01_RS11740 a2d01df458adc01aff6033dccdfccd96 257 Pfam PF00005 ABC transporter 31 179 1.2E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS11740 a2d01df458adc01aff6033dccdfccd96 257 SMART SM00382 40 227 6.4E-16 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS11740 a2d01df458adc01aff6033dccdfccd96 257 PANTHER PTHR24220 17 256 2.4E-164 T 14-09-2016 AMK01_RS11740 a2d01df458adc01aff6033dccdfccd96 257 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS18775 605125ac953ffa3a0e4288c38e99f4fa 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 14-09-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMK01_RS18775 605125ac953ffa3a0e4288c38e99f4fa 212 Pfam PF01081 KDPG and KHG aldolase 10 203 1.5E-66 T 14-09-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMK01_RS18775 605125ac953ffa3a0e4288c38e99f4fa 212 PANTHER PTHR30246 1 210 2.2E-93 T 14-09-2016 AMK01_RS18775 605125ac953ffa3a0e4288c38e99f4fa 212 Gene3D G3DSA:3.20.20.70 4 210 7.1E-74 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS18775 605125ac953ffa3a0e4288c38e99f4fa 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 209 5.8E-72 T 14-09-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMK01_RS18775 605125ac953ffa3a0e4288c38e99f4fa 212 SUPERFAMILY SSF51569 5 209 3.3E-65 T 14-09-2016 AMK01_RS18775 605125ac953ffa3a0e4288c38e99f4fa 212 PANTHER PTHR30246:SF0 1 210 2.2E-93 T 14-09-2016 AMK01_RS11960 bb5b8cb4aea7895b95f46660b2744efd 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 118 2.4E-38 T 14-09-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS11960 bb5b8cb4aea7895b95f46660b2744efd 121 SUPERFAMILY SSF55620 4 118 1.65E-33 T 14-09-2016 AMK01_RS11960 bb5b8cb4aea7895b95f46660b2744efd 121 Pfam PF02152 Dihydroneopterin aldolase 6 117 4.8E-27 T 14-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS11960 bb5b8cb4aea7895b95f46660b2744efd 121 SMART SM00905 6 119 8.4E-41 T 14-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS11960 bb5b8cb4aea7895b95f46660b2744efd 121 TIGRFAM TIGR00526 folB_dom: FolB domain 5 118 2.5E-20 T 14-09-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 AMK01_RS11960 bb5b8cb4aea7895b95f46660b2744efd 121 Gene3D G3DSA:3.30.1130.10 4 118 6.5E-34 T 14-09-2016 AMK01_RS11960 bb5b8cb4aea7895b95f46660b2744efd 121 PANTHER PTHR20941 13 118 1.2E-21 T 14-09-2016 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 181 3.1E-12 T 14-09-2016 IPR024478 4HB MCP domain AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 313 493 1.5E-36 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 PANTHER PTHR32089 100 497 3.2E-102 T 14-09-2016 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 185 205 4.7E-22 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 379 4.7E-22 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 4.7E-22 T 14-09-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 Gene3D G3DSA:1.10.287.950 270 466 1.9E-43 T 14-09-2016 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 SUPERFAMILY SSF58104 228 495 1.57E-62 T 14-09-2016 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 SMART SM00304 208 260 1.1E-7 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 SMART SM00283 261 494 3.5E-63 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS18165 2a0966c26253ad4a761c1820ca60b03f 567 Pfam PF00672 HAMP domain 189 256 4.8E-13 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS17895 c6452715c4c4ecffc6aa19f554bb439f 406 PANTHER PTHR10366:SF337 240 390 1.3E-124 T 14-09-2016 AMK01_RS17895 c6452715c4c4ecffc6aa19f554bb439f 406 PANTHER PTHR10366:SF337 2 221 1.3E-124 T 14-09-2016 AMK01_RS17895 c6452715c4c4ecffc6aa19f554bb439f 406 PANTHER PTHR10366 240 390 1.3E-124 T 14-09-2016 AMK01_RS17895 c6452715c4c4ecffc6aa19f554bb439f 406 PANTHER PTHR10366 2 221 1.3E-124 T 14-09-2016 AMK01_RS17895 c6452715c4c4ecffc6aa19f554bb439f 406 SUPERFAMILY SSF51735 1 366 1.85E-58 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17895 c6452715c4c4ecffc6aa19f554bb439f 406 Gene3D G3DSA:3.90.25.10 222 378 5.7E-32 T 14-09-2016 AMK01_RS17895 c6452715c4c4ecffc6aa19f554bb439f 406 Gene3D G3DSA:3.40.50.720 1 221 1.9E-60 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17895 c6452715c4c4ecffc6aa19f554bb439f 406 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 289 6.5E-25 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 5.3E-9 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 5.3E-9 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 71 7.1E-15 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 Gene3D G3DSA:1.20.120.530 108 230 3.2E-10 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 SMART SM00345 17 78 5.7E-16 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 SUPERFAMILY SSF48008 108 228 9.68E-9 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 SUPERFAMILY SSF46785 10 93 1.77E-17 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 Pfam PF07729 FCD domain 111 218 1.3E-9 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 Gene3D G3DSA:1.10.10.10 11 80 9.8E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 SMART SM00895 101 221 0.0035 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10525 207d3bbd26348713a41cf64b0d53b0a2 234 PANTHER PTHR11751 18 117 7.5E-17 T 14-09-2016 AMK01_RS06500 cb32898b5a03ea0950767e0cd1d74462 126 Gene3D G3DSA:3.10.180.10 1 122 1.2E-35 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06500 cb32898b5a03ea0950767e0cd1d74462 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 118 5.4E-7 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS06500 cb32898b5a03ea0950767e0cd1d74462 126 SUPERFAMILY SSF54593 2 124 3.99E-25 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06500 cb32898b5a03ea0950767e0cd1d74462 126 PANTHER PTHR35006 1 122 4.9E-42 T 14-09-2016 AMK01_RS11535 d79d456f862866b82eb321e0d2b699ad 113 Pfam PF01541 GIY-YIG catalytic domain 3 74 6.0E-11 T 14-09-2016 IPR000305 GIY-YIG nuclease superfamily AMK01_RS11535 d79d456f862866b82eb321e0d2b699ad 113 Gene3D G3DSA:3.40.1440.10 4 90 5.1E-6 T 14-09-2016 IPR027299 GIY-YIG domain AMK01_RS11535 d79d456f862866b82eb321e0d2b699ad 113 SUPERFAMILY SSF82771 3 89 5.1E-19 T 14-09-2016 IPR000305 GIY-YIG nuclease superfamily AMK01_RS11535 d79d456f862866b82eb321e0d2b699ad 113 PANTHER PTHR34477:SF2 4 103 1.0E-34 T 14-09-2016 AMK01_RS11535 d79d456f862866b82eb321e0d2b699ad 113 PANTHER PTHR34477 4 103 1.0E-34 T 14-09-2016 AMK01_RS13395 6b9168513ea7e7739f7e35a3c7a45390 379 PANTHER PTHR30489:SF11 1 379 1.6E-42 T 14-09-2016 AMK01_RS13395 6b9168513ea7e7739f7e35a3c7a45390 379 Pfam PF02687 FtsX-like permease family 262 369 7.0E-11 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK01_RS13395 6b9168513ea7e7739f7e35a3c7a45390 379 Pfam PF12704 MacB-like periplasmic core domain 21 227 3.8E-8 T 14-09-2016 IPR025857 MacB-like periplasmic core domain AMK01_RS13395 6b9168513ea7e7739f7e35a3c7a45390 379 PANTHER PTHR30489 1 379 1.6E-42 T 14-09-2016 AMK01_RS15280 d6f43b7a5ecd0f5d5ae096764c4f5837 288 Gene3D G3DSA:3.90.550.10 2 250 6.2E-48 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS15280 d6f43b7a5ecd0f5d5ae096764c4f5837 288 PANTHER PTHR13778:SF1 67 239 2.0E-16 T 14-09-2016 AMK01_RS15280 d6f43b7a5ecd0f5d5ae096764c4f5837 288 Pfam PF01501 Glycosyl transferase family 8 19 226 1.6E-32 T 14-09-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 AMK01_RS15280 d6f43b7a5ecd0f5d5ae096764c4f5837 288 SUPERFAMILY SSF53448 2 248 4.5E-44 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS15280 d6f43b7a5ecd0f5d5ae096764c4f5837 288 PANTHER PTHR13778 67 239 2.0E-16 T 14-09-2016 AMK01_RS05880 00f1df232aacc2a4c547aa7b21d79be0 335 PANTHER PTHR42110 1 335 3.9E-64 T 14-09-2016 AMK01_RS05880 00f1df232aacc2a4c547aa7b21d79be0 335 Pfam PF06089 L-asparaginase II 7 328 6.5E-115 T 14-09-2016 IPR010349 L-asparaginase II AMK01_RS05880 00f1df232aacc2a4c547aa7b21d79be0 335 PANTHER PTHR42110:SF1 1 335 3.9E-64 T 14-09-2016 AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 SUPERFAMILY SSF53850 202 396 3.26E-16 T 14-09-2016 AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 Gene3D G3DSA:3.40.190.10 191 302 2.3E-10 T 14-09-2016 AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 54 9.1E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 105 161 1.4E-17 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 SUPERFAMILY SSF46785 99 181 9.99E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 Gene3D G3DSA:1.10.10.10 4 62 9.2E-7 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 Gene3D G3DSA:1.10.10.10 101 179 1.6E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 138 149 1.9E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 117 128 1.9E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 128 138 1.9E-7 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 Pfam PF03466 LysR substrate binding domain 203 385 7.5E-15 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS02620 1c28f951a55c96f3bb29ca69c52df68c 409 PANTHER PTHR30126 100 408 9.9E-30 T 14-09-2016 AMK01_RS09680 192d43c696783d0863765d8a965dcfeb 522 Pfam PF13531 Bacterial extracellular solute-binding protein 32 294 1.4E-20 T 14-09-2016 AMK01_RS09680 192d43c696783d0863765d8a965dcfeb 522 SUPERFAMILY SSF53850 32 316 1.18E-9 T 14-09-2016 AMK01_RS09680 192d43c696783d0863765d8a965dcfeb 522 Gene3D G3DSA:3.40.50.410 346 505 3.4E-10 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS09680 192d43c696783d0863765d8a965dcfeb 522 SUPERFAMILY SSF53300 345 505 1.35E-15 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS09680 192d43c696783d0863765d8a965dcfeb 522 SMART SM00327 341 517 3.9E-7 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS09680 192d43c696783d0863765d8a965dcfeb 522 Gene3D G3DSA:3.40.190.10 254 315 4.3E-7 T 14-09-2016 AMK01_RS09680 192d43c696783d0863765d8a965dcfeb 522 Gene3D G3DSA:3.40.190.10 2 145 4.3E-7 T 14-09-2016 AMK01_RS09680 192d43c696783d0863765d8a965dcfeb 522 Pfam PF13768 von Willebrand factor type A domain 347 500 2.8E-8 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS15570 0be53cd0b684f4281a4e4ba8bbc63750 937 Pfam PF07584 Aerotolerance regulator N-terminal 6 80 2.4E-16 T 14-09-2016 IPR024163 Aerotolerance regulator, N-terminal AMK01_RS15570 0be53cd0b684f4281a4e4ba8bbc63750 937 Pfam PF13709 Domain of unknown function (DUF4159) 700 917 7.3E-60 T 14-09-2016 IPR025297 Domain of unknown function DUF4159 AMK01_RS15570 0be53cd0b684f4281a4e4ba8bbc63750 937 SUPERFAMILY SSF52317 312 521 1.3E-6 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS15570 0be53cd0b684f4281a4e4ba8bbc63750 937 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 7 85 2.6E-23 T 14-09-2016 IPR011933 Double transmembrane domain AMK01_RS17695 fb105e652c23e64a8c4150b98ed18ca1 513 Gene3D G3DSA:3.40.50.1000 106 210 6.8E-7 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS17695 fb105e652c23e64a8c4150b98ed18ca1 513 Gene3D G3DSA:3.40.50.1000 48 60 6.8E-7 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS17695 fb105e652c23e64a8c4150b98ed18ca1 513 PANTHER PTHR11048:SF5 231 478 8.9E-30 T 14-09-2016 AMK01_RS17695 fb105e652c23e64a8c4150b98ed18ca1 513 SUPERFAMILY SSF56784 106 199 3.05E-11 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS17695 fb105e652c23e64a8c4150b98ed18ca1 513 SUPERFAMILY SSF56784 46 60 3.05E-11 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS17695 fb105e652c23e64a8c4150b98ed18ca1 513 PANTHER PTHR11048 231 478 8.9E-30 T 14-09-2016 AMK01_RS17695 fb105e652c23e64a8c4150b98ed18ca1 513 Pfam PF01040 UbiA prenyltransferase family 258 481 5.3E-22 T 14-09-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AMK01_RS15040 e303ce59a3f11c2669fcf5135f1bd04f 140 Gene3D G3DSA:2.60.120.460 3 140 6.1E-51 T 14-09-2016 IPR001602 Uncharacterised protein family UPF0047 AMK01_RS15040 e303ce59a3f11c2669fcf5135f1bd04f 140 PANTHER PTHR30615 3 140 5.6E-52 T 14-09-2016 AMK01_RS15040 e303ce59a3f11c2669fcf5135f1bd04f 140 PIRSF PIRSF004681 1 140 1.2E-45 T 14-09-2016 IPR001602 Uncharacterised protein family UPF0047 AMK01_RS15040 e303ce59a3f11c2669fcf5135f1bd04f 140 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 3 138 1.8E-40 T 14-09-2016 IPR001602 Uncharacterised protein family UPF0047 AMK01_RS15040 e303ce59a3f11c2669fcf5135f1bd04f 140 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 102 120 - T 14-09-2016 IPR001602 Uncharacterised protein family UPF0047 AMK01_RS15040 e303ce59a3f11c2669fcf5135f1bd04f 140 Pfam PF01894 Uncharacterised protein family UPF0047 18 137 4.2E-36 T 14-09-2016 IPR001602 Uncharacterised protein family UPF0047 AMK01_RS15040 e303ce59a3f11c2669fcf5135f1bd04f 140 SUPERFAMILY SSF111038 3 140 1.24E-46 T 14-09-2016 IPR001602 Uncharacterised protein family UPF0047 AMK01_RS01380 1d06605244a25f41545533c7621f187f 135 Pfam PF07886 BA14K-like protein 102 131 2.0E-13 T 14-09-2016 IPR012413 BA14k family GO:0009405 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 35 547 1.5E-168 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PANTHER PTHR11686 26 529 9.3E-202 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PANTHER PTHR11686:SF9 26 529 9.3E-202 T 14-09-2016 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 Pfam PF01019 Gamma-glutamyltranspeptidase 50 544 1.5E-171 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 SUPERFAMILY SSF56235 28 548 1.02E-176 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 263 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 57 82 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 375 393 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 148 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 440 455 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 277 296 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 481 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 167 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 1.9E-76 T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS18250 3b084b71a0e84717cb9cd68caead34f5 578 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 375 399 - T 14-09-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 Gene3D G3DSA:3.40.50.970 406 607 1.1E-50 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 PANTHER PTHR18968 1 602 1.4E-215 T 14-09-2016 AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 PANTHER PTHR18968:SF9 1 602 1.4E-215 T 14-09-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 24 198 1.6E-36 T 14-09-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 SUPERFAMILY SSF52467 182 379 2.0E-43 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 Gene3D G3DSA:3.40.50.1220 213 405 4.8E-48 T 14-09-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 221 354 3.8E-36 T 14-09-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 569 2.2E-35 T 14-09-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 Gene3D G3DSA:3.40.50.970 3 212 1.9E-53 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 SUPERFAMILY SSF52518 35 208 1.93E-31 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 SUPERFAMILY SSF52518 397 601 4.57E-49 T 14-09-2016 IPR029061 Thiamin diphosphate-binding fold AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 6 614 1.3E-281 T 14-09-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 AMK01_RS06855 629d0c1836369e47fe658efad11050df 616 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 454 473 - T 14-09-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 295 3.6E-116 T 14-09-2016 IPR017685 HTH-type transcriptional regulator ArgP AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 SUPERFAMILY SSF46785 1 111 8.78E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 SUPERFAMILY SSF53850 94 289 1.61E-16 T 14-09-2016 AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 Pfam PF03466 LysR substrate binding domain 96 276 3.5E-11 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 PANTHER PTHR30579:SF2 1 297 4.8E-93 T 14-09-2016 AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 PANTHER PTHR30579 1 297 4.8E-93 T 14-09-2016 AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 Gene3D G3DSA:1.10.10.10 2 71 1.9E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 5.8E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS12790 2f7921adc30ffd90ebb6a68efdb5ed79 297 Gene3D G3DSA:3.40.190.10 95 201 1.2E-41 T 14-09-2016 AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 PANTHER PTHR26402:SF528 5 239 9.7E-97 T 14-09-2016 AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 SMART SM00862 159 235 4.4E-19 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 Pfam PF00072 Response regulator receiver domain 7 118 5.7E-29 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 Gene3D G3DSA:1.10.10.10 136 238 2.7E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 SUPERFAMILY SSF52172 6 134 5.98E-41 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 SMART SM00448 5 117 3.9E-38 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 SUPERFAMILY SSF46894 136 236 5.95E-25 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 4.7E-20 T 14-09-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 PANTHER PTHR26402 5 239 9.7E-97 T 14-09-2016 AMK01_RS12330 3f73dc86a7f86ccc82c0cae39f9dccb4 246 Gene3D G3DSA:3.40.50.2300 6 126 2.4E-41 T 14-09-2016 AMK01_RS20790 3e2713104fc8a96dc7f3c9a5f6f965de 392 Gene3D G3DSA:3.40.50.2000 204 348 1.1E-18 T 14-09-2016 AMK01_RS20790 3e2713104fc8a96dc7f3c9a5f6f965de 392 SUPERFAMILY SSF53756 21 384 7.46E-60 T 14-09-2016 AMK01_RS20790 3e2713104fc8a96dc7f3c9a5f6f965de 392 PANTHER PTHR12526 21 382 1.8E-43 T 14-09-2016 AMK01_RS20790 3e2713104fc8a96dc7f3c9a5f6f965de 392 Pfam PF13439 Glycosyltransferase Family 4 33 193 3.2E-19 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK01_RS20790 3e2713104fc8a96dc7f3c9a5f6f965de 392 PANTHER PTHR12526:SF373 21 382 1.8E-43 T 14-09-2016 AMK01_RS20790 3e2713104fc8a96dc7f3c9a5f6f965de 392 Pfam PF00534 Glycosyl transferases group 1 197 348 1.8E-19 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 SUPERFAMILY SSF158472 210 260 3.66E-5 T 14-09-2016 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 Pfam PF00672 HAMP domain 193 259 3.9E-7 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 PANTHER PTHR32089 154 245 3.6E-98 T 14-09-2016 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 PANTHER PTHR32089 325 593 3.6E-98 T 14-09-2016 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 SMART SM00283 343 590 4.2E-87 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 SMART SM00304 210 263 0.012 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 SMART SM00304 291 342 4.6 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 SUPERFAMILY SSF58104 321 591 1.83E-62 T 14-09-2016 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 Gene3D G3DSA:3.30.450.20 23 180 1.2E-34 T 14-09-2016 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 Gene3D G3DSA:1.10.287.950 358 562 1.5E-53 T 14-09-2016 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 SMART SM01049 33 126 5.9E-24 T 14-09-2016 IPR033480 Single Cache domain 2 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 Pfam PF17200 Single Cache domain 2 38 185 8.9E-32 T 14-09-2016 IPR033480 Single Cache domain 2 AMK01_RS04525 7140a4a2c16547a68a561001b7db902b 607 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 399 589 3.1E-52 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS02560 e91593a76aeccd773ebff22ca94684fe 229 Pfam PF00156 Phosphoribosyl transferase domain 55 154 7.3E-16 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK01_RS02560 e91593a76aeccd773ebff22ca94684fe 229 Gene3D G3DSA:3.40.50.2020 12 217 3.9E-50 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS02560 e91593a76aeccd773ebff22ca94684fe 229 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 229 29.884 T 14-09-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02560 e91593a76aeccd773ebff22ca94684fe 229 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 19 180 6.2E-34 T 14-09-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK01_RS02560 e91593a76aeccd773ebff22ca94684fe 229 PANTHER PTHR19278 12 217 4.2E-46 T 14-09-2016 AMK01_RS02560 e91593a76aeccd773ebff22ca94684fe 229 SUPERFAMILY SSF53271 18 221 2.36E-45 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 Pfam PF00285 Citrate synthase, C-terminal domain 4 351 1.5E-90 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 Gene3D G3DSA:1.10.230.10 223 315 2.6E-23 T 14-09-2016 IPR016143 Citrate synthase-like, small alpha subdomain AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 PIRSF PIRSF001369 1 361 4.0E-86 T 14-09-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 ProSitePatterns PS00480 Citrate synthase signature. 243 255 - T 14-09-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 SUPERFAMILY SSF48256 3 359 7.72E-96 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 PRINTS PR00143 Citrate synthase signature 236 256 8.9E-30 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 PRINTS PR00143 Citrate synthase signature 301 317 8.9E-30 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 PRINTS PR00143 Citrate synthase signature 161 176 8.9E-30 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 PRINTS PR00143 Citrate synthase signature 321 335 8.9E-30 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 PRINTS PR00143 Citrate synthase signature 183 211 8.9E-30 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 PANTHER PTHR11739:SF4 1 357 6.6E-93 T 14-09-2016 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 Gene3D G3DSA:1.10.580.10 10 222 1.2E-50 T 14-09-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 AMK01_RS11190 7be6d4e3805231e8322797be61560d3f 362 PANTHER PTHR11739 1 357 6.6E-93 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS19850 7c42e962c9d4001ccfa88e6f574ae09e 113 SMART SM00418 27 105 1.2E-26 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS19850 7c42e962c9d4001ccfa88e6f574ae09e 113 Gene3D G3DSA:1.10.10.10 14 107 1.1E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19850 7c42e962c9d4001ccfa88e6f574ae09e 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 80 6.7E-14 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS19850 7c42e962c9d4001ccfa88e6f574ae09e 113 PANTHER PTHR33154 21 113 2.4E-24 T 14-09-2016 AMK01_RS19850 7c42e962c9d4001ccfa88e6f574ae09e 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 5.8E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS19850 7c42e962c9d4001ccfa88e6f574ae09e 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 5.8E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS19850 7c42e962c9d4001ccfa88e6f574ae09e 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 5.8E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS19850 7c42e962c9d4001ccfa88e6f574ae09e 113 SUPERFAMILY SSF46785 23 107 4.4E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS12125 3ff74fca9751a6d6a628edd68b1e33ce 427 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 14 57 1.8E-8 T 14-09-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMK01_RS12125 3ff74fca9751a6d6a628edd68b1e33ce 427 SUPERFAMILY SSF53300 154 166 3.71E-6 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS12125 3ff74fca9751a6d6a628edd68b1e33ce 427 SUPERFAMILY SSF53300 208 327 3.71E-6 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS01660 bfda4c8c9e9210c629e89d7a2e41aebc 132 SUPERFAMILY SSF54593 1 118 7.79E-17 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS01660 bfda4c8c9e9210c629e89d7a2e41aebc 132 Gene3D G3DSA:3.10.180.10 1 118 2.1E-24 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS10215 8b61e2e888991e0f8f1fc9b214e3657a 738 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 700 737 1.8E-8 T 14-09-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 AMK01_RS10215 8b61e2e888991e0f8f1fc9b214e3657a 738 Pfam PF00069 Protein kinase domain 84 223 5.8E-7 T 14-09-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMK01_RS10215 8b61e2e888991e0f8f1fc9b214e3657a 738 Gene3D G3DSA:1.10.510.10 113 223 1.5E-11 T 14-09-2016 AMK01_RS10215 8b61e2e888991e0f8f1fc9b214e3657a 738 Gene3D G3DSA:3.30.65.10 698 738 7.8E-8 T 14-09-2016 AMK01_RS10215 8b61e2e888991e0f8f1fc9b214e3657a 738 SUPERFAMILY SSF56112 11 237 9.78E-16 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS10215 8b61e2e888991e0f8f1fc9b214e3657a 738 SUPERFAMILY SSF57783 692 737 7.48E-7 T 14-09-2016 AMK01_RS14120 23a6f280c926f21c5cb99baf56e1fe93 306 PANTHER PTHR32243 163 305 2.8E-103 T 14-09-2016 AMK01_RS14120 23a6f280c926f21c5cb99baf56e1fe93 306 PANTHER PTHR32243 1 135 2.8E-103 T 14-09-2016 AMK01_RS14120 23a6f280c926f21c5cb99baf56e1fe93 306 PANTHER PTHR32243:SF31 163 305 2.8E-103 T 14-09-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK01_RS14120 23a6f280c926f21c5cb99baf56e1fe93 306 PANTHER PTHR32243:SF31 1 135 2.8E-103 T 14-09-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK01_RS14120 23a6f280c926f21c5cb99baf56e1fe93 306 Gene3D G3DSA:1.10.3720.10 5 295 2.8E-46 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14120 23a6f280c926f21c5cb99baf56e1fe93 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 301 1.8E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14120 23a6f280c926f21c5cb99baf56e1fe93 306 SUPERFAMILY SSF161098 5 304 1.96E-52 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 Gene3D G3DSA:1.25.40.10 44 227 1.1E-27 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 PANTHER PTHR11102 51 223 4.6E-17 T 14-09-2016 AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 Pfam PF08238 Sel1 repeat 77 107 0.017 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 Pfam PF08238 Sel1 repeat 121 149 110.0 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 Pfam PF08238 Sel1 repeat 159 194 3.9E-5 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 SUPERFAMILY SSF81901 42 234 1.48E-27 T 14-09-2016 AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 SMART SM00671 73 108 2.4E-5 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 SMART SM00671 119 157 18.0 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS09155 ae65d0c93a911ee88b55fd2f37ee6dac 264 SMART SM00671 159 194 6.5E-7 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.5E-43 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 SMART SM00938 4 105 2.2E-67 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 PANTHER PTHR30115:SF12 1 112 2.0E-64 T 14-09-2016 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 PANTHER PTHR30115 1 112 2.0E-64 T 14-09-2016 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 PIRSF PIRSF039144 1 112 5.1E-55 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-09-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 PRINTS PR00340 P-II protein signature 52 75 8.4E-45 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 PRINTS PR00340 P-II protein signature 83 103 8.4E-45 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 PRINTS PR00340 P-II protein signature 2 17 8.4E-45 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 PRINTS PR00340 P-II protein signature 23 41 8.4E-45 T 14-09-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 SUPERFAMILY SSF54913 1 112 2.28E-46 T 14-09-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 Gene3D G3DSA:3.30.70.120 1 112 4.5E-51 T 14-09-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMK01_RS10790 261a83a9d492cb3b8c91e24982fcf152 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-09-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMK01_RS06895 f5c1e825ee94347421b6a80d27523a2f 735 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 542 715 4.2E-7 T 14-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK01_RS06895 f5c1e825ee94347421b6a80d27523a2f 735 PANTHER PTHR32309 6 712 1.0E-74 T 14-09-2016 AMK01_RS06895 f5c1e825ee94347421b6a80d27523a2f 735 SUPERFAMILY SSF52540 540 716 1.75E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06895 f5c1e825ee94347421b6a80d27523a2f 735 Gene3D G3DSA:3.40.50.300 539 712 3.7E-25 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06895 f5c1e825ee94347421b6a80d27523a2f 735 PANTHER PTHR32309:SF13 6 712 1.0E-74 T 14-09-2016 AMK01_RS06895 f5c1e825ee94347421b6a80d27523a2f 735 Pfam PF02706 Chain length determinant protein 30 203 1.4E-9 T 14-09-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMK01_RS12620 303f64f40070c9b442f8aca0362ceb70 459 PANTHER PTHR11748 21 457 1.3E-99 T 14-09-2016 AMK01_RS12620 303f64f40070c9b442f8aca0362ceb70 459 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 48 81 - T 14-09-2016 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 AMK01_RS12620 303f64f40070c9b442f8aca0362ceb70 459 Gene3D G3DSA:3.30.465.10 107 213 3.6E-17 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS12620 303f64f40070c9b442f8aca0362ceb70 459 SUPERFAMILY SSF56176 20 213 4.63E-56 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS12620 303f64f40070c9b442f8aca0362ceb70 459 Pfam PF01565 FAD binding domain 48 182 8.0E-33 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS12620 303f64f40070c9b442f8aca0362ceb70 459 PANTHER PTHR11748:SF86 21 457 1.3E-99 T 14-09-2016 AMK01_RS12620 303f64f40070c9b442f8aca0362ceb70 459 Pfam PF08031 Berberine and berberine like 413 456 4.0E-10 T 14-09-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 AMK01_RS12620 303f64f40070c9b442f8aca0362ceb70 459 Gene3D G3DSA:3.30.43.10 35 106 1.4E-14 T 14-09-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 SUPERFAMILY SSF51735 1 182 2.1E-61 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 SUPERFAMILY SSF55347 154 316 1.25E-72 T 14-09-2016 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 Gene3D G3DSA:3.40.50.720 1 162 7.4E-71 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 SMART SM00846 3 154 7.6E-94 T 14-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 7.8E-40 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 7.8E-40 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 7.8E-40 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 7.8E-40 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 7.8E-40 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 PIRSF PIRSF000149 1 336 6.8E-139 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 3.0E-66 T 14-09-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 3.9E-129 T 14-09-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 PANTHER PTHR10836:SF50 1 334 3.2E-200 T 14-09-2016 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 Gene3D G3DSA:3.30.360.10 163 317 1.2E-76 T 14-09-2016 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 PANTHER PTHR10836 1 334 3.2E-200 T 14-09-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 154 3.4E-56 T 14-09-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS18055 3ec9a08bffacc91887a73a3ddf74454d 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 14-09-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 1.1E-123 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 3.6E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 3.6E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 3.6E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 3.6E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 3.6E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 3.6E-38 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 Gene3D G3DSA:3.90.226.10 56 271 2.1E-45 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 316 47.593 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 SUPERFAMILY SSF52096 4 315 6.7E-95 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 148 3.5E-56 T 14-09-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 PANTHER PTHR22855:SF42 3 315 5.5E-106 T 14-09-2016 AMK01_RS19680 490f0e2605964af29f7d5a028d1ef841 317 PANTHER PTHR22855 3 315 5.5E-106 T 14-09-2016 AMK01_RS03465 ead55c069c71321400600f2d99173185 290 PANTHER PTHR30433 1 289 2.1E-132 T 14-09-2016 AMK01_RS03465 ead55c069c71321400600f2d99173185 290 PANTHER PTHR30433:SF4 1 289 2.1E-132 T 14-09-2016 IPR022522 Flagellar motor stator, MotA AMK01_RS03465 ead55c069c71321400600f2d99173185 290 Pfam PF01618 MotA/TolQ/ExbB proton channel family 132 228 3.6E-11 T 14-09-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AMK01_RS03465 ead55c069c71321400600f2d99173185 290 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 14-09-2016 IPR000540 Flagellar motor protein MotA, conserved site AMK01_RS03465 ead55c069c71321400600f2d99173185 290 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 2.7E-108 T 14-09-2016 IPR022522 Flagellar motor stator, MotA AMK01_RS09205 3f6bcd07399423f2cdc9e0df04a054a1 204 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 204 17.81 T 14-09-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMK01_RS09205 3f6bcd07399423f2cdc9e0df04a054a1 204 Pfam PF02416 mttA/Hcf106 family 4 34 1.6E-5 T 14-09-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMK01_RS09205 3f6bcd07399423f2cdc9e0df04a054a1 204 PANTHER PTHR33162:SF1 1 66 2.3E-14 T 14-09-2016 AMK01_RS09205 3f6bcd07399423f2cdc9e0df04a054a1 204 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 3.6E-29 T 14-09-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMK01_RS09205 3f6bcd07399423f2cdc9e0df04a054a1 204 PANTHER PTHR33162 1 66 2.3E-14 T 14-09-2016 AMK01_RS09205 3f6bcd07399423f2cdc9e0df04a054a1 204 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-10 T 14-09-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AMK01_RS09205 3f6bcd07399423f2cdc9e0df04a054a1 204 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-10 T 14-09-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AMK01_RS09205 3f6bcd07399423f2cdc9e0df04a054a1 204 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-10 T 14-09-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AMK01_RS10610 7c51215884c4f767499ee4e87eac1f85 345 Gene3D G3DSA:1.10.3720.10 112 337 2.4E-61 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10610 7c51215884c4f767499ee4e87eac1f85 345 SUPERFAMILY SSF161098 112 330 5.76E-59 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS10610 7c51215884c4f767499ee4e87eac1f85 345 PANTHER PTHR30193:SF6 22 344 2.2E-82 T 14-09-2016 AMK01_RS10610 7c51215884c4f767499ee4e87eac1f85 345 PANTHER PTHR30193 22 344 2.2E-82 T 14-09-2016 AMK01_RS10610 7c51215884c4f767499ee4e87eac1f85 345 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 329 6.4E-16 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00770 6789f21e42f371fe553f95a10e0395f8 205 PANTHER PTHR30212 8 191 9.0E-31 T 14-09-2016 AMK01_RS00770 6789f21e42f371fe553f95a10e0395f8 205 Pfam PF03473 MOSC domain 47 158 1.2E-15 T 14-09-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMK01_RS00770 6789f21e42f371fe553f95a10e0395f8 205 SUPERFAMILY SSF50800 1 187 1.2E-46 T 14-09-2016 IPR011037 Pyruvate kinase-like, insert domain AMK01_RS00770 6789f21e42f371fe553f95a10e0395f8 205 Gene3D G3DSA:2.40.33.20 1 192 3.0E-54 T 14-09-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 Hamap MF_00455 Xylose isomerase [xylA]. 12 436 53.392 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PANTHER PTHR32176:SF0 5 436 1.3E-241 T 14-09-2016 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 270 297 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 155 174 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 179 200 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 91 113 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 332 343 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 132 152 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 228 252 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 299 310 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PRINTS PR00688 Xylose isomerase signature 206 225 7.7E-80 T 14-09-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 PANTHER PTHR32176 5 436 1.3E-241 T 14-09-2016 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 SUPERFAMILY SSF51658 5 436 4.42E-171 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 5 436 4.4E-211 T 14-09-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AMK01_RS18840 39fc60591ba77bddc9668d0c7a8e7a56 436 Gene3D G3DSA:3.20.20.150 5 436 1.2E-201 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS00965 8851b1712c0b50cf9eee58c02870b4a3 235 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS00965 8851b1712c0b50cf9eee58c02870b4a3 235 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 6 226 2.9E-99 T 14-09-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 AMK01_RS00965 8851b1712c0b50cf9eee58c02870b4a3 235 SMART SM00382 36 229 5.8E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS00965 8851b1712c0b50cf9eee58c02870b4a3 235 PANTHER PTHR24220:SF380 6 225 2.3E-108 T 14-09-2016 AMK01_RS00965 8851b1712c0b50cf9eee58c02870b4a3 235 SUPERFAMILY SSF52540 8 225 3.12E-43 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00965 8851b1712c0b50cf9eee58c02870b4a3 235 Gene3D G3DSA:3.40.50.300 5 224 1.0E-46 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00965 8851b1712c0b50cf9eee58c02870b4a3 235 PANTHER PTHR24220 6 225 2.3E-108 T 14-09-2016 AMK01_RS00965 8851b1712c0b50cf9eee58c02870b4a3 235 Pfam PF00005 ABC transporter 28 181 8.9E-26 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS04430 a07eb2994c243860afd5dcca09a03acf 385 PANTHER PTHR11228:SF26 43 343 3.3E-99 T 14-09-2016 AMK01_RS04430 a07eb2994c243860afd5dcca09a03acf 385 SMART SM00729 94 319 1.5E-8 T 14-09-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK01_RS04430 a07eb2994c243860afd5dcca09a03acf 385 Pfam PF04055 Radical SAM superfamily 98 276 7.6E-17 T 14-09-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK01_RS04430 a07eb2994c243860afd5dcca09a03acf 385 PANTHER PTHR11228 43 343 3.3E-99 T 14-09-2016 AMK01_RS04430 a07eb2994c243860afd5dcca09a03acf 385 SUPERFAMILY SSF102114 96 324 1.57E-13 T 14-09-2016 AMK01_RS04430 a07eb2994c243860afd5dcca09a03acf 385 Gene3D G3DSA:3.20.20.70 98 284 1.9E-9 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS16340 a6224ab9da61cef799f5757922a0d005 737 Pfam PF00665 Integrase core domain 302 435 1.4E-9 T 14-09-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK01_RS16340 a6224ab9da61cef799f5757922a0d005 737 Pfam PF09299 Mu transposase, C-terminal 531 583 9.2E-6 T 14-09-2016 IPR015378 Transposase-like, Mu, C-terminal AMK01_RS16340 a6224ab9da61cef799f5757922a0d005 737 Gene3D G3DSA:3.30.420.10 297 460 3.4E-12 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS16340 a6224ab9da61cef799f5757922a0d005 737 SUPERFAMILY SSF53098 298 439 1.5E-11 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS20045 2b75f501dd7b9b7b1323202163ec52cf 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 6 124 9.6E-40 T 14-09-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 AMK01_RS20045 2b75f501dd7b9b7b1323202163ec52cf 131 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 8 32 - T 14-09-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 AMK01_RS20045 2b75f501dd7b9b7b1323202163ec52cf 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 5 121 1.4E-28 T 14-09-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 AMK01_RS20045 2b75f501dd7b9b7b1323202163ec52cf 131 PIRSF PIRSF000178 1 127 5.0E-40 T 14-09-2016 AMK01_RS20045 2b75f501dd7b9b7b1323202163ec52cf 131 PANTHER PTHR10978 7 131 8.0E-43 T 14-09-2016 AMK01_RS20045 2b75f501dd7b9b7b1323202163ec52cf 131 SUPERFAMILY SSF81343 3 124 8.11E-33 T 14-09-2016 AMK01_RS20045 2b75f501dd7b9b7b1323202163ec52cf 131 Gene3D G3DSA:1.20.1300.10 3 125 9.8E-42 T 14-09-2016 AMK01_RS20045 2b75f501dd7b9b7b1323202163ec52cf 131 PANTHER PTHR10978:SF6 7 131 8.0E-43 T 14-09-2016 AMK01_RS08195 7e269b07b8524f6581714c8ed76e69f5 434 PANTHER PTHR30489 28 434 2.6E-79 T 14-09-2016 AMK01_RS08195 7e269b07b8524f6581714c8ed76e69f5 434 Pfam PF12704 MacB-like periplasmic core domain 51 263 6.1E-16 T 14-09-2016 IPR025857 MacB-like periplasmic core domain AMK01_RS08195 7e269b07b8524f6581714c8ed76e69f5 434 PANTHER PTHR30489:SF8 28 434 2.6E-79 T 14-09-2016 AMK01_RS08195 7e269b07b8524f6581714c8ed76e69f5 434 Pfam PF02687 FtsX-like permease family 295 427 9.3E-14 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK01_RS08195 7e269b07b8524f6581714c8ed76e69f5 434 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 24 434 7.5E-151 T 14-09-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 159 3.0E-37 T 14-09-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PANTHER PTHR11728 1 327 2.3E-98 T 14-09-2016 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 Gene3D G3DSA:3.40.50.720 4 178 1.1E-50 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 318 33.094 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PANTHER PTHR11728:SF1 1 327 2.3E-98 T 14-09-2016 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 SUPERFAMILY SSF51735 3 179 1.25E-42 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 SUPERFAMILY SSF48179 178 327 1.09E-44 T 14-09-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 Gene3D G3DSA:1.10.1040.10 179 322 6.4E-46 T 14-09-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 237 254 6.5E-36 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 6.5E-36 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 6.5E-36 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 132 152 6.5E-36 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 6.5E-36 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 6.5E-36 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 316 2.0E-40 T 14-09-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS20070 71d4c0c75deb270b74cd342ba02185f1 327 PIRSF PIRSF000114 1 327 1.8E-89 T 14-09-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK01_RS03565 ab407b9fc7d86f159d8c2b4857129898 320 Gene3D G3DSA:1.20.1330.10 53 178 4.7E-10 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03565 ab407b9fc7d86f159d8c2b4857129898 320 Gene3D G3DSA:1.20.1330.10 222 269 4.7E-10 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03565 ab407b9fc7d86f159d8c2b4857129898 320 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 135 2.0E-25 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03565 ab407b9fc7d86f159d8c2b4857129898 320 Pfam PF00700 Bacterial flagellin C-terminal helical region 235 319 8.9E-11 T 14-09-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AMK01_RS03565 ab407b9fc7d86f159d8c2b4857129898 320 SUPERFAMILY SSF64518 6 316 4.05E-45 T 14-09-2016 AMK01_RS03565 ab407b9fc7d86f159d8c2b4857129898 320 PRINTS PR00207 Flagellin signature 75 94 1.5E-5 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03565 ab407b9fc7d86f159d8c2b4857129898 320 PRINTS PR00207 Flagellin signature 36 53 1.5E-5 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS03565 ab407b9fc7d86f159d8c2b4857129898 320 PRINTS PR00207 Flagellin signature 107 130 1.5E-5 T 14-09-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AMK01_RS00525 50599684a99f4e2ab2a9693fd8fdd9e5 280 Pfam PF12686 Protein of unknown function (DUF3800) 8 238 2.7E-6 T 14-09-2016 IPR024524 Protein of unknown function DUF3800 AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 SUPERFAMILY SSF51735 1 241 6.2E-55 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 Gene3D G3DSA:3.40.50.720 2 240 2.0E-55 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.1E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.1E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.1E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.1E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.1E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-28 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 PANTHER PTHR24322 10 133 5.0E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 PANTHER PTHR24322 150 179 5.0E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12525 5b2e65271d957fb810be4637166cc016 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 238 1.7E-39 T 14-09-2016 AMK01_RS02715 4330d24be509467b7ab5628e91a45a01 344 Gene3D G3DSA:3.40.190.10 26 182 2.6E-29 T 14-09-2016 AMK01_RS02715 4330d24be509467b7ab5628e91a45a01 344 Pfam PF12849 PBP superfamily domain 21 310 1.4E-46 T 14-09-2016 IPR024370 PBP domain AMK01_RS02715 4330d24be509467b7ab5628e91a45a01 344 SUPERFAMILY SSF53850 19 339 1.61E-63 T 14-09-2016 AMK01_RS02715 4330d24be509467b7ab5628e91a45a01 344 PANTHER PTHR30570:SF1 8 342 1.4E-34 T 14-09-2016 AMK01_RS02715 4330d24be509467b7ab5628e91a45a01 344 PANTHER PTHR30570 8 342 1.4E-34 T 14-09-2016 AMK01_RS17650 2447dff968960cde7c1c27b0672cce43 341 SMART SM00382 30 213 1.5E-19 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17650 2447dff968960cde7c1c27b0672cce43 341 Pfam PF00005 ABC transporter 22 163 1.0E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17650 2447dff968960cde7c1c27b0672cce43 341 PANTHER PTHR24220:SF151 7 237 2.5E-122 T 14-09-2016 AMK01_RS17650 2447dff968960cde7c1c27b0672cce43 341 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS17650 2447dff968960cde7c1c27b0672cce43 341 Gene3D G3DSA:3.40.50.300 5 235 3.1E-81 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17650 2447dff968960cde7c1c27b0672cce43 341 SUPERFAMILY SSF52540 6 243 7.4E-86 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17650 2447dff968960cde7c1c27b0672cce43 341 PANTHER PTHR24220 7 237 2.5E-122 T 14-09-2016 AMK01_RS17430 31dd0c58589c328d4f2794a2229cd952 303 Pfam PF01501 Glycosyl transferase family 8 5 233 2.7E-17 T 14-09-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 AMK01_RS17430 31dd0c58589c328d4f2794a2229cd952 303 Gene3D G3DSA:3.90.550.10 6 237 1.2E-27 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS17430 31dd0c58589c328d4f2794a2229cd952 303 SUPERFAMILY SSF53448 3 262 3.37E-27 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS04815 62f1b4dbdd8c7dd350f0f4201baf9c3d 213 Pfam PF01865 Protein of unknown function DUF47 5 211 5.5E-58 T 14-09-2016 IPR018445 Putative phosphate transport regulator AMK01_RS04815 62f1b4dbdd8c7dd350f0f4201baf9c3d 213 PANTHER PTHR37298 3 213 1.8E-53 T 14-09-2016 AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 Pfam PF00202 Aminotransferase class-III 31 447 1.0E-93 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 Gene3D G3DSA:3.40.640.10 68 344 5.3E-83 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 PIRSF PIRSF000521 31 450 8.5E-28 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 PANTHER PTHR11986:SF81 2 455 9.7E-238 T 14-09-2016 AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 SUPERFAMILY SSF53383 16 448 1.83E-118 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 Gene3D G3DSA:3.90.1150.10 347 450 4.1E-41 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 Gene3D G3DSA:3.90.1150.10 7 66 4.1E-41 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS10995 73c09a7f72f7fc988c52bc33b0b1d9ee 460 PANTHER PTHR11986 2 455 9.7E-238 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS20510 f7a9cfc4d2e1e88246ce3d682401c0aa 277 PANTHER PTHR24220:SF586 6 267 1.8E-103 T 14-09-2016 AMK01_RS20510 f7a9cfc4d2e1e88246ce3d682401c0aa 277 SMART SM00382 32 231 1.8E-9 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20510 f7a9cfc4d2e1e88246ce3d682401c0aa 277 PANTHER PTHR24220 6 267 1.8E-103 T 14-09-2016 AMK01_RS20510 f7a9cfc4d2e1e88246ce3d682401c0aa 277 Pfam PF00005 ABC transporter 27 182 1.0E-20 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS20510 f7a9cfc4d2e1e88246ce3d682401c0aa 277 Gene3D G3DSA:3.40.50.300 3 253 4.2E-62 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20510 f7a9cfc4d2e1e88246ce3d682401c0aa 277 SUPERFAMILY SSF52540 4 243 1.94E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09815 9452175278f586bd618999a73c08e3d3 193 Gene3D G3DSA:3.40.630.30 6 177 4.4E-18 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09815 9452175278f586bd618999a73c08e3d3 193 Pfam PF00583 Acetyltransferase (GNAT) family 88 165 6.1E-9 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS09815 9452175278f586bd618999a73c08e3d3 193 SUPERFAMILY SSF55729 2 172 5.23E-17 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS15625 ee3264bf2d2b49e293ad36a4e89fbff6 409 Pfam PF03594 Benzoate membrane transport protein 14 394 8.0E-105 T 14-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMK01_RS15625 ee3264bf2d2b49e293ad36a4e89fbff6 409 PANTHER PTHR30199 1 406 1.6E-110 T 14-09-2016 AMK01_RS15625 ee3264bf2d2b49e293ad36a4e89fbff6 409 PANTHER PTHR30199:SF0 1 406 1.6E-110 T 14-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMK01_RS15625 ee3264bf2d2b49e293ad36a4e89fbff6 409 TIGRFAM TIGR00843 benE: benzoate transporter 16 392 8.8E-76 T 14-09-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AMK01_RS15270 5fb552904947953837027c02b6daffba 229 PANTHER PTHR35105:SF2 7 215 1.0E-87 T 14-09-2016 AMK01_RS15270 5fb552904947953837027c02b6daffba 229 Gene3D G3DSA:3.90.550.10 59 221 5.4E-6 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS15270 5fb552904947953837027c02b6daffba 229 SUPERFAMILY SSF53448 4 224 1.01E-26 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS15270 5fb552904947953837027c02b6daffba 229 PANTHER PTHR35105 7 215 1.0E-87 T 14-09-2016 AMK01_RS20100 be67061b521be2d86eb1f56eb0d1693a 161 Pfam PF05099 Tellurite resistance protein TerB 5 144 6.7E-43 T 14-09-2016 IPR007791 Co-chaperone DjlA, N-terminal AMK01_RS20100 be67061b521be2d86eb1f56eb0d1693a 161 Gene3D G3DSA:1.10.3680.10 6 146 1.2E-22 T 14-09-2016 IPR029024 TerB-like AMK01_RS20100 be67061b521be2d86eb1f56eb0d1693a 161 SUPERFAMILY SSF158682 1 149 3.01E-30 T 14-09-2016 IPR029024 TerB-like AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 Pfam PF01555 DNA methylase 3 184 1.0E-24 T 14-09-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 Gene3D G3DSA:3.40.50.150 97 223 5.4E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 Gene3D G3DSA:3.40.50.150 3 32 5.4E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 PANTHER PTHR13370 73 202 9.8E-25 T 14-09-2016 AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 PANTHER PTHR13370:SF7 73 202 9.8E-25 T 14-09-2016 AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 136 158 4.5E-13 T 14-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 159 173 4.5E-13 T 14-09-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 SUPERFAMILY SSF53335 3 55 7.95E-28 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS21730 8a82344f6d1debe5fbe47237dc09d377 348 SUPERFAMILY SSF53335 115 199 7.95E-28 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS09970 f0ffd1a0d88c3ad70870575cd5634cdf 402 PANTHER PTHR11751:SF306 16 399 4.4E-148 T 14-09-2016 AMK01_RS09970 f0ffd1a0d88c3ad70870575cd5634cdf 402 PANTHER PTHR11751 16 399 4.4E-148 T 14-09-2016 AMK01_RS09970 f0ffd1a0d88c3ad70870575cd5634cdf 402 Gene3D G3DSA:3.40.640.10 47 277 2.8E-68 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS09970 f0ffd1a0d88c3ad70870575cd5634cdf 402 Gene3D G3DSA:3.90.1150.10 278 401 5.4E-40 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS09970 f0ffd1a0d88c3ad70870575cd5634cdf 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 14-09-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK01_RS09970 f0ffd1a0d88c3ad70870575cd5634cdf 402 SUPERFAMILY SSF53383 7 399 2.31E-104 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS09970 f0ffd1a0d88c3ad70870575cd5634cdf 402 Pfam PF00155 Aminotransferase class I and II 34 394 1.9E-65 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS16455 a9febf4fef1ccec648e1f5e4c81952fc 151 SUPERFAMILY SSF48452 2 104 3.2E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS16455 a9febf4fef1ccec648e1f5e4c81952fc 151 Gene3D G3DSA:1.25.40.10 2 101 1.9E-4 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS17665 4a18230d67febbf1781ea7b58cc3470d 405 Pfam PF09594 Protein of unknown function (DUF2029) 101 321 6.2E-30 T 14-09-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 ProSitePatterns PS00018 EF-hand calcium-binding domain. 191 203 - T 14-09-2016 IPR018247 EF-Hand 1, calcium-binding site AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 SMART SM00054 158 186 0.32 T 14-09-2016 IPR002048 EF-hand domain GO:0005509 AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 SMART SM00054 51 79 0.73 T 14-09-2016 IPR002048 EF-hand domain GO:0005509 AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 ProSitePatterns PS00018 EF-hand calcium-binding domain. 84 96 - T 14-09-2016 IPR018247 EF-Hand 1, calcium-binding site AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 Pfam PF13202 EF hand 76 97 9.7E-4 T 14-09-2016 IPR002048 EF-hand domain GO:0005509 AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 Pfam PF13202 EF hand 183 201 0.0021 T 14-09-2016 IPR002048 EF-hand domain GO:0005509 AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 Pfam PF13202 EF hand 163 178 0.031 T 14-09-2016 IPR002048 EF-hand domain GO:0005509 AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 Pfam PF13202 EF hand 55 71 2.2E-5 T 14-09-2016 IPR002048 EF-hand domain GO:0005509 AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 Gene3D G3DSA:1.10.238.10 170 203 3.3E-6 T 14-09-2016 IPR011992 EF-hand domain pair AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 Gene3D G3DSA:1.10.238.10 159 169 8.0E-11 T 14-09-2016 IPR011992 EF-hand domain pair AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 Gene3D G3DSA:1.10.238.10 43 123 8.0E-11 T 14-09-2016 IPR011992 EF-hand domain pair AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 SUPERFAMILY SSF47473 53 105 7.08E-18 T 14-09-2016 IPR011992 EF-hand domain pair AMK01_RS02305 d996631c3ed3a4de326513c8181df026 209 SUPERFAMILY SSF47473 159 203 7.08E-18 T 14-09-2016 IPR011992 EF-hand domain pair AMK01_RS04010 34d81cc9b66fea7df76f6b16f62eb66b 270 SUPERFAMILY SSF53335 78 251 1.36E-23 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04010 34d81cc9b66fea7df76f6b16f62eb66b 270 Pfam PF08241 Methyltransferase domain 103 190 6.9E-13 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK01_RS04010 34d81cc9b66fea7df76f6b16f62eb66b 270 Gene3D G3DSA:3.40.50.150 89 252 3.2E-23 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS04010 34d81cc9b66fea7df76f6b16f62eb66b 270 PANTHER PTHR10108 73 254 4.1E-15 T 14-09-2016 AMK01_RS20495 3ad76ba3a5c5610e3ea566c92de23495 547 PANTHER PTHR30290 1 540 6.9E-109 T 14-09-2016 AMK01_RS20495 3ad76ba3a5c5610e3ea566c92de23495 547 Gene3D G3DSA:3.40.190.10 160 313 4.7E-40 T 14-09-2016 AMK01_RS20495 3ad76ba3a5c5610e3ea566c92de23495 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 458 1.7E-87 T 14-09-2016 IPR000914 Solute-binding protein family 5 domain AMK01_RS20495 3ad76ba3a5c5610e3ea566c92de23495 547 Gene3D G3DSA:3.10.105.10 314 517 1.0E-44 T 14-09-2016 AMK01_RS20495 3ad76ba3a5c5610e3ea566c92de23495 547 PIRSF PIRSF002741 2 541 9.0E-83 T 14-09-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK01_RS20495 3ad76ba3a5c5610e3ea566c92de23495 547 ProSitePatterns PS00284 Serpins signature. 505 515 - T 14-09-2016 IPR023795 Serpin, conserved site AMK01_RS20495 3ad76ba3a5c5610e3ea566c92de23495 547 SUPERFAMILY SSF53850 34 540 4.35E-115 T 14-09-2016 AMK01_RS20495 3ad76ba3a5c5610e3ea566c92de23495 547 Gene3D G3DSA:3.90.76.10 71 159 9.5E-23 T 14-09-2016 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 28 500 7.8E-231 T 14-09-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 Pfam PF01048 Phosphorylase superfamily 285 447 2.9E-11 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 PANTHER PTHR21234 196 241 1.6E-113 T 14-09-2016 IPR018017 Nucleoside phosphorylase AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 PANTHER PTHR21234 264 500 1.6E-113 T 14-09-2016 IPR018017 Nucleoside phosphorylase AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 29 183 2.1E-52 T 14-09-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 Gene3D G3DSA:3.30.1730.10 20 186 7.9E-60 T 14-09-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 Hamap MF_01932 AMP nucleosidase [amn]. 20 500 62.972 T 14-09-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 SUPERFAMILY SSF53167 26 500 1.44E-151 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 Gene3D G3DSA:3.40.50.1580 190 480 1.1E-112 T 14-09-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 PANTHER PTHR21234:SF11 196 241 1.6E-113 T 14-09-2016 AMK01_RS06775 a32df5056a455f15539eeddfa7dd7637 500 PANTHER PTHR21234:SF11 264 500 1.6E-113 T 14-09-2016 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 PANTHER PTHR11751:SF10 152 496 2.1E-99 T 14-09-2016 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 PANTHER PTHR11751:SF10 16 53 2.1E-99 T 14-09-2016 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 SUPERFAMILY SSF46785 24 92 1.31E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 Gene3D G3DSA:1.10.10.10 30 92 5.7E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 90 3.4E-16 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 Gene3D G3DSA:3.40.640.10 169 384 2.4E-54 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 PANTHER PTHR11751 152 496 2.1E-99 T 14-09-2016 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 PANTHER PTHR11751 16 53 2.1E-99 T 14-09-2016 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 SUPERFAMILY SSF53383 125 492 3.52E-88 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 SMART SM00345 31 90 1.5E-17 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 Pfam PF00155 Aminotransferase class I and II 169 459 1.1E-16 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 9.2E-6 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS14330 22da99d2baf31c195689154fd3257dcf 497 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 9.2E-6 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS07145 b6f32534ded838f537c3e8c9a0635457 171 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 159 170 - T 14-09-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 AMK01_RS07145 b6f32534ded838f537c3e8c9a0635457 171 Gene3D G3DSA:2.60.40.200 27 171 3.0E-46 T 14-09-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS07145 b6f32534ded838f537c3e8c9a0635457 171 PANTHER PTHR10003 4 170 3.8E-36 T 14-09-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 AMK01_RS07145 b6f32534ded838f537c3e8c9a0635457 171 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 35 170 4.6E-40 T 14-09-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS07145 b6f32534ded838f537c3e8c9a0635457 171 SUPERFAMILY SSF49329 27 171 1.57E-41 T 14-09-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS08460 955aee6ee480c33585bda34971870574 97 Pfam PF00276 Ribosomal protein L23 8 93 4.9E-33 T 14-09-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08460 955aee6ee480c33585bda34971870574 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 96 22.053 T 14-09-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08460 955aee6ee480c33585bda34971870574 97 PANTHER PTHR11620 4 93 1.4E-29 T 14-09-2016 AMK01_RS08460 955aee6ee480c33585bda34971870574 97 Gene3D G3DSA:3.30.70.330 5 96 5.0E-37 T 14-09-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 AMK01_RS08460 955aee6ee480c33585bda34971870574 97 SUPERFAMILY SSF54189 5 93 2.55E-33 T 14-09-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS04595 1b81e15f0157e34d55a32d0024b80c06 155 Pfam PF07886 BA14K-like protein 123 152 1.1E-15 T 14-09-2016 IPR012413 BA14k family GO:0009405 AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 SUPERFAMILY SSF52540 4 254 5.22E-58 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 SMART SM00382 31 229 9.2E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 PIRSF PIRSF037116 1 258 2.1E-148 T 14-09-2016 IPR012700 Phosphonate C-P lyase system, PhnK AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 5 256 1.1E-124 T 14-09-2016 IPR012700 Phosphonate C-P lyase system, PhnK AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 Pfam PF00005 ABC transporter 23 179 5.0E-29 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 Gene3D G3DSA:3.40.50.300 3 254 6.0E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 PANTHER PTHR24220 8 257 7.8E-129 T 14-09-2016 AMK01_RS00970 9c620011761953379d8792bca6ceebff 258 PANTHER PTHR24220:SF554 8 257 7.8E-129 T 14-09-2016 AMK01_RS20490 eb4ffb4842eba944ec22281a715a14a8 352 PANTHER PTHR10443 4 61 2.2E-78 T 14-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMK01_RS20490 eb4ffb4842eba944ec22281a715a14a8 352 PANTHER PTHR10443 82 348 2.2E-78 T 14-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMK01_RS20490 eb4ffb4842eba944ec22281a715a14a8 352 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 3 344 1.0E-98 T 14-09-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMK01_RS20490 eb4ffb4842eba944ec22281a715a14a8 352 Gene3D G3DSA:3.20.20.140 3 349 1.0E-101 T 14-09-2016 AMK01_RS20490 eb4ffb4842eba944ec22281a715a14a8 352 SUPERFAMILY SSF51556 3 348 1.93E-87 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS14715 51010adbfefb00d6ea269276cdad283f 414 Gene3D G3DSA:3.40.50.150 56 104 3.0E-8 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14715 51010adbfefb00d6ea269276cdad283f 414 Gene3D G3DSA:3.40.50.150 301 381 3.0E-8 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14715 51010adbfefb00d6ea269276cdad283f 414 SUPERFAMILY SSF53335 304 366 1.92E-8 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14715 51010adbfefb00d6ea269276cdad283f 414 SUPERFAMILY SSF53335 56 107 1.92E-8 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14715 51010adbfefb00d6ea269276cdad283f 414 Pfam PF11899 Protein of unknown function (DUF3419) 37 412 9.5E-115 T 14-09-2016 IPR021829 Protein of unknown function DUF3419 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 SUPERFAMILY SSF88946 17 112 2.09E-35 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 Gene3D G3DSA:1.10.10.10 219 277 5.9E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 Pfam PF04545 Sigma-70, region 4 223 273 9.9E-18 T 14-09-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 PIRSF PIRSF000770 4 287 8.5E-35 T 14-09-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 PANTHER PTHR30376 11 276 3.5E-74 T 14-09-2016 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 246 272 - T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 68 81 - T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 40 276 1.0E-31 T 14-09-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 SUPERFAMILY SSF88659 185 278 1.83E-19 T 14-09-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 Gene3D G3DSA:1.10.601.10 11 112 5.2E-34 T 14-09-2016 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 PRINTS PR00046 Major sigma-70 factor signature 68 81 4.7E-23 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 PRINTS PR00046 Major sigma-70 factor signature 227 239 4.7E-23 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 PRINTS PR00046 Major sigma-70 factor signature 92 100 4.7E-23 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 PRINTS PR00046 Major sigma-70 factor signature 246 261 4.7E-23 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 PRINTS PR00046 Major sigma-70 factor signature 261 272 4.7E-23 T 14-09-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20670 e5df0f98fcf5634e0b380f9d5f29bf2e 287 Pfam PF04542 Sigma-70 region 2 46 113 2.2E-17 T 14-09-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS20560 d9f804367bed8ecb21223dbfb627564e 253 PIRSF PIRSF039085 1 247 5.0E-99 T 14-09-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK01_RS20560 d9f804367bed8ecb21223dbfb627564e 253 PANTHER PTHR24220 3 245 5.8E-110 T 14-09-2016 AMK01_RS20560 d9f804367bed8ecb21223dbfb627564e 253 Gene3D G3DSA:3.40.50.300 1 243 7.1E-79 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20560 d9f804367bed8ecb21223dbfb627564e 253 PANTHER PTHR24220:SF327 3 245 5.8E-110 T 14-09-2016 AMK01_RS20560 d9f804367bed8ecb21223dbfb627564e 253 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS20560 d9f804367bed8ecb21223dbfb627564e 253 SMART SM00382 26 219 2.1E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS20560 d9f804367bed8ecb21223dbfb627564e 253 SUPERFAMILY SSF52540 1 241 7.59E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20560 d9f804367bed8ecb21223dbfb627564e 253 Pfam PF00005 ABC transporter 17 171 2.0E-34 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17375 f109597947e928e83bca1afaab19550b 275 PANTHER PTHR10963 118 266 1.6E-18 T 14-09-2016 AMK01_RS17375 f109597947e928e83bca1afaab19550b 275 Pfam PF00722 Glycosyl hydrolases family 16 90 263 6.8E-21 T 14-09-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMK01_RS17375 f109597947e928e83bca1afaab19550b 275 SUPERFAMILY SSF49899 29 270 1.48E-47 T 14-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK01_RS17375 f109597947e928e83bca1afaab19550b 275 Gene3D G3DSA:2.60.120.200 25 272 3.3E-50 T 14-09-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 Gene3D G3DSA:1.10.10.10 11 90 1.8E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 SUPERFAMILY SSF46785 10 115 3.54E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 Gene3D G3DSA:3.40.190.10 96 181 2.9E-25 T 14-09-2016 AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 PANTHER PTHR30537:SF12 1 300 1.8E-144 T 14-09-2016 AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 Gene3D G3DSA:3.40.190.10 182 262 6.2E-20 T 14-09-2016 AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 Pfam PF03466 LysR substrate binding domain 92 295 3.0E-40 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 2.0E-17 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 SUPERFAMILY SSF53850 93 298 9.01E-44 T 14-09-2016 AMK01_RS14405 d68465baa6a8007f1645a2dd65949595 300 PANTHER PTHR30537 1 300 1.8E-144 T 14-09-2016 AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 SMART SM00382 37 235 2.3E-15 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 PANTHER PTHR24220 10 319 1.6E-143 T 14-09-2016 AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 Pfam PF00005 ABC transporter 29 185 2.0E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 SUPERFAMILY SSF52540 36 321 3.55E-68 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 301 2.2E-20 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 320 4.1E-25 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 PANTHER PTHR24220:SF535 10 319 1.6E-143 T 14-09-2016 AMK01_RS15780 cfea84df3fed613e78290b2d218f53cd 333 Gene3D G3DSA:3.40.50.300 4 265 4.5E-74 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS06380 297db5c679991defb17c947c780db3f6 364 Gene3D G3DSA:3.40.50.2000 166 318 1.6E-19 T 14-09-2016 AMK01_RS06380 297db5c679991defb17c947c780db3f6 364 PANTHER PTHR12526 1 340 5.8E-41 T 14-09-2016 AMK01_RS06380 297db5c679991defb17c947c780db3f6 364 SUPERFAMILY SSF53756 10 340 3.45E-56 T 14-09-2016 AMK01_RS06380 297db5c679991defb17c947c780db3f6 364 Pfam PF00534 Glycosyl transferases group 1 169 321 1.8E-22 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS06380 297db5c679991defb17c947c780db3f6 364 Pfam PF13439 Glycosyltransferase Family 4 18 119 8.2E-12 T 14-09-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK01_RS16705 472596ff77aad52057d219c45439f88f 262 Pfam PF00149 Calcineurin-like phosphoesterase 37 236 3.1E-15 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS16705 472596ff77aad52057d219c45439f88f 262 SUPERFAMILY SSF56300 36 243 3.65E-40 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS16705 472596ff77aad52057d219c45439f88f 262 PANTHER PTHR24032 21 252 1.3E-29 T 14-09-2016 AMK01_RS16705 472596ff77aad52057d219c45439f88f 262 Gene3D G3DSA:3.60.21.10 36 258 4.8E-47 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS11650 5b013434ad4163998950a7454fce4f0a 159 Pfam PF04120 Low affinity iron permease 5 129 1.5E-49 T 14-09-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 SUPERFAMILY SSF52768 2 339 2.06E-80 T 14-09-2016 AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 PANTHER PTHR10625:SF121 27 75 7.0E-68 T 14-09-2016 AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 PANTHER PTHR10625:SF121 99 336 7.0E-68 T 14-09-2016 AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 Gene3D G3DSA:3.40.800.20 21 339 1.1E-64 T 14-09-2016 IPR023801 Histone deacetylase domain AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 PANTHER PTHR10625 27 75 7.0E-68 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 PANTHER PTHR10625 99 336 7.0E-68 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 Pfam PF00850 Histone deacetylase domain 49 338 4.6E-55 T 14-09-2016 IPR023801 Histone deacetylase domain AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 5.5E-11 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 PRINTS PR01270 Histone deacetylase superfamily signature 188 203 5.5E-11 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS01440 e5521fea10935141b4561f8f2d6d31b7 341 PRINTS PR01270 Histone deacetylase superfamily signature 274 284 5.5E-11 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS18130 9e0111043cc1acd5e54501ba16f9c957 343 Gene3D G3DSA:3.30.1330.60 213 342 5.4E-34 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS18130 9e0111043cc1acd5e54501ba16f9c957 343 SUPERFAMILY SSF103088 217 340 4.45E-30 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS18130 9e0111043cc1acd5e54501ba16f9c957 343 PANTHER PTHR30128 219 343 3.7E-30 T 14-09-2016 AMK01_RS18130 9e0111043cc1acd5e54501ba16f9c957 343 Pfam PF00691 OmpA family 227 334 4.5E-18 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS19570 bcc694100804837672df1cc95001faf2 176 PANTHER PTHR12192 5 175 4.3E-54 T 14-09-2016 IPR006840 ChaC-like protein AMK01_RS19570 bcc694100804837672df1cc95001faf2 176 PANTHER PTHR12192:SF9 5 175 4.3E-54 T 14-09-2016 AMK01_RS19570 bcc694100804837672df1cc95001faf2 176 Pfam PF04752 ChaC-like protein 4 171 4.9E-55 T 14-09-2016 IPR006840 ChaC-like protein AMK01_RS19570 bcc694100804837672df1cc95001faf2 176 Gene3D G3DSA:3.10.490.10 2 164 2.0E-27 T 14-09-2016 IPR013024 Butirosin biosynthesis, BtrG-like AMK01_RS19570 bcc694100804837672df1cc95001faf2 176 SUPERFAMILY SSF110857 4 117 7.32E-14 T 14-09-2016 IPR013024 Butirosin biosynthesis, BtrG-like AMK01_RS03620 05fec744f52e6d2afa4dc54544911cf9 149 PIRSF PIRSF009533 3 147 1.1E-61 T 14-09-2016 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 AMK01_RS03620 05fec744f52e6d2afa4dc54544911cf9 149 Pfam PF07378 Flagellar protein FlbT 5 128 2.5E-42 T 14-09-2016 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 AMK01_RS03620 05fec744f52e6d2afa4dc54544911cf9 149 Hamap MF_00783 Probable flagellum biosynthesis repressor protein FlbT [flbT]. 5 130 31.337 T 14-09-2016 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 AMK01_RS18770 a68cbd3b2225d300032a1181d7471014 239 Gene3D G3DSA:1.10.3680.10 70 230 2.5E-20 T 14-09-2016 IPR029024 TerB-like AMK01_RS18770 a68cbd3b2225d300032a1181d7471014 239 Pfam PF04391 Protein of unknown function (DUF533) 37 230 1.1E-57 T 14-09-2016 IPR007486 Inner membrane protein YebE AMK01_RS18770 a68cbd3b2225d300032a1181d7471014 239 SUPERFAMILY SSF158682 74 231 4.58E-23 T 14-09-2016 IPR029024 TerB-like AMK01_RS17050 97b6496aea3e3e8d7983cea544dc2ba2 430 Gene3D G3DSA:3.40.50.2300 147 338 2.9E-70 T 14-09-2016 AMK01_RS17050 97b6496aea3e3e8d7983cea544dc2ba2 430 SUPERFAMILY SSF53822 31 397 2.12E-87 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS17050 97b6496aea3e3e8d7983cea544dc2ba2 430 PANTHER PTHR30483:SF8 14 412 1.3E-194 T 14-09-2016 AMK01_RS17050 97b6496aea3e3e8d7983cea544dc2ba2 430 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 32 392 4.3E-168 T 14-09-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA AMK01_RS17050 97b6496aea3e3e8d7983cea544dc2ba2 430 PANTHER PTHR30483 14 412 1.3E-194 T 14-09-2016 AMK01_RS17050 97b6496aea3e3e8d7983cea544dc2ba2 430 Pfam PF13433 Periplasmic binding protein domain 32 399 1.9E-167 T 14-09-2016 AMK01_RS11695 851457225a465fd30fed099dc18b5f81 84 Pfam PF06568 Domain of unknown function (DUF1127) 38 73 1.5E-10 T 14-09-2016 IPR009506 Protein of unknown function DUF1127 AMK01_RS09535 3a9e9b4c999cecb5bcbcc38be20c5f8d 373 Pfam PF08291 Peptidase M15 249 349 1.4E-25 T 14-09-2016 IPR013230 Peptidase M15A, C-terminal MetaCyc: PWY-6470 AMK01_RS09535 3a9e9b4c999cecb5bcbcc38be20c5f8d 373 Gene3D G3DSA:3.30.1380.10 259 358 9.2E-31 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS09535 3a9e9b4c999cecb5bcbcc38be20c5f8d 373 SUPERFAMILY SSF55166 244 361 1.69E-28 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS24655 9856871e3ae9b9db4b92be13939bcea3 176 Pfam PF05190 MutS family domain IV 9 103 2.3E-21 T 14-09-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMK01_RS24655 9856871e3ae9b9db4b92be13939bcea3 176 PANTHER PTHR11361:SF86 2 175 1.4E-48 T 14-09-2016 AMK01_RS24655 9856871e3ae9b9db4b92be13939bcea3 176 Gene3D G3DSA:1.10.1420.10 1 56 3.8E-13 T 14-09-2016 AMK01_RS24655 9856871e3ae9b9db4b92be13939bcea3 176 SUPERFAMILY SSF48334 1 149 6.8E-32 T 14-09-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK01_RS24655 9856871e3ae9b9db4b92be13939bcea3 176 PANTHER PTHR11361 2 175 1.4E-48 T 14-09-2016 AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 Pfam PF01050 Mannose-6-phosphate isomerase 319 470 2.8E-64 T 14-09-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 Gene3D G3DSA:2.60.120.10 363 474 2.1E-43 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 PANTHER PTHR12526 357 474 1.9E-99 T 14-09-2016 AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 473 3.5E-197 T 14-09-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 PANTHER PTHR12526:SF387 357 474 1.9E-99 T 14-09-2016 AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 SUPERFAMILY SSF53448 4 283 6.93E-69 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 SUPERFAMILY SSF51182 188 474 8.91E-70 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 PANTHER PTHR12526:SF387 157 292 1.9E-99 T 14-09-2016 AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 Gene3D G3DSA:3.90.550.10 3 274 4.9E-86 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 PANTHER PTHR12526 157 292 1.9E-99 T 14-09-2016 AMK01_RS16735 03b249cc0422a4dfacd08b43609ae38b 475 Pfam PF00483 Nucleotidyl transferase 7 288 2.7E-59 T 14-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK01_RS14290 4c9dad845b651dd9e65884ea4888dca4 158 Pfam PF10027 Predicted integral membrane protein (DUF2269) 6 153 3.9E-56 T 14-09-2016 IPR018729 Protein of unknown function DUF2269, transmembrane AMK01_RS05240 35f511177f2988220570e923ab9a0f33 450 PANTHER PTHR30600 319 449 3.8E-16 T 14-09-2016 AMK01_RS05240 35f511177f2988220570e923ab9a0f33 450 Gene3D G3DSA:1.10.760.10 323 450 2.1E-23 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS05240 35f511177f2988220570e923ab9a0f33 450 SUPERFAMILY SSF46626 329 450 2.36E-21 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS01540 0b45bf81001f33f8620f5bd26efcf6bf 328 Gene3D G3DSA:3.30.360.10 141 327 1.4E-35 T 14-09-2016 AMK01_RS01540 0b45bf81001f33f8620f5bd26efcf6bf 328 Gene3D G3DSA:3.40.50.720 1 140 8.8E-44 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01540 0b45bf81001f33f8620f5bd26efcf6bf 328 PANTHER PTHR22604 1 328 1.7E-77 T 14-09-2016 AMK01_RS01540 0b45bf81001f33f8620f5bd26efcf6bf 328 PANTHER PTHR22604:SF105 1 328 1.7E-77 T 14-09-2016 AMK01_RS01540 0b45bf81001f33f8620f5bd26efcf6bf 328 SUPERFAMILY SSF55347 128 295 1.37E-35 T 14-09-2016 AMK01_RS01540 0b45bf81001f33f8620f5bd26efcf6bf 328 SUPERFAMILY SSF51735 2 154 2.82E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS01540 0b45bf81001f33f8620f5bd26efcf6bf 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 121 2.3E-20 T 14-09-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK01_RS11420 680fab3d4feeee8ecdc6dfd0135ed551 157 Gene3D G3DSA:3.40.630.30 12 151 3.1E-44 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11420 680fab3d4feeee8ecdc6dfd0135ed551 157 PANTHER PTHR23091 12 151 2.1E-36 T 14-09-2016 AMK01_RS11420 680fab3d4feeee8ecdc6dfd0135ed551 157 SUPERFAMILY SSF55729 12 151 4.01E-33 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS11420 680fab3d4feeee8ecdc6dfd0135ed551 157 PANTHER PTHR23091:SF275 12 151 2.1E-36 T 14-09-2016 AMK01_RS11420 680fab3d4feeee8ecdc6dfd0135ed551 157 Pfam PF13673 Acetyltransferase (GNAT) domain 56 150 1.5E-15 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS03845 18002070bd4b24470330aa899a4aeeb8 498 PANTHER PTHR11699 1 497 8.0E-276 T 14-09-2016 AMK01_RS03845 18002070bd4b24470330aa899a4aeeb8 498 SUPERFAMILY SSF53720 2 482 6.68E-148 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS03845 18002070bd4b24470330aa899a4aeeb8 498 PANTHER PTHR11699:SF189 1 497 8.0E-276 T 14-09-2016 AMK01_RS03845 18002070bd4b24470330aa899a4aeeb8 498 Gene3D G3DSA:3.40.605.10 3 260 3.1E-90 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS03845 18002070bd4b24470330aa899a4aeeb8 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS03845 18002070bd4b24470330aa899a4aeeb8 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 5.9E-198 T 14-09-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 AMK01_RS03845 18002070bd4b24470330aa899a4aeeb8 498 Gene3D G3DSA:3.40.309.10 261 443 1.5E-62 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS03845 18002070bd4b24470330aa899a4aeeb8 498 Pfam PF00171 Aldehyde dehydrogenase family 17 478 1.3E-135 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS11165 e15aec3ee093b9b9eb1eec17ac5e8237 219 PANTHER PTHR18895 54 185 1.0E-27 T 14-09-2016 AMK01_RS11165 e15aec3ee093b9b9eb1eec17ac5e8237 219 Gene3D G3DSA:3.40.50.150 51 197 2.5E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS11165 e15aec3ee093b9b9eb1eec17ac5e8237 219 SUPERFAMILY SSF53335 50 172 8.89E-24 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS11165 e15aec3ee093b9b9eb1eec17ac5e8237 219 PANTHER PTHR18895:SF3 54 185 1.0E-27 T 14-09-2016 AMK01_RS11165 e15aec3ee093b9b9eb1eec17ac5e8237 219 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 78 146 1.4E-11 T 14-09-2016 AMK01_RS05065 1cce09b9eac33bec308966bbbeb77cc1 91 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 4 77 2.9E-9 T 14-09-2016 IPR022789 Antitoxin ParD AMK01_RS05065 1cce09b9eac33bec308966bbbeb77cc1 91 SUPERFAMILY SSF47598 6 48 1.67E-6 T 14-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK01_RS05065 1cce09b9eac33bec308966bbbeb77cc1 91 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 8 73 1.4E-14 T 14-09-2016 IPR022789 Antitoxin ParD AMK01_RS01880 ead24d123827c3a175f668557fe932d6 270 Pfam PF13230 Glutamine amidotransferases class-II 32 199 5.5E-17 T 14-09-2016 IPR026869 Putative glutamine amidotransferase type 2 AMK01_RS01880 ead24d123827c3a175f668557fe932d6 270 PANTHER PTHR11907 1 256 3.2E-83 T 14-09-2016 AMK01_RS01880 ead24d123827c3a175f668557fe932d6 270 PANTHER PTHR11907:SF1 1 256 3.2E-83 T 14-09-2016 AMK01_RS01880 ead24d123827c3a175f668557fe932d6 270 Gene3D G3DSA:3.60.20.10 1 252 2.0E-63 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS01880 ead24d123827c3a175f668557fe932d6 270 SUPERFAMILY SSF56235 2 250 9.44E-35 T 14-09-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK01_RS18565 aa968697b376809f0a242e1a9b28a2e9 162 Pfam PF01575 MaoC like domain 13 116 2.3E-23 T 14-09-2016 IPR002539 MaoC-like domain AMK01_RS18565 aa968697b376809f0a242e1a9b28a2e9 162 Gene3D G3DSA:3.10.129.10 7 152 5.7E-31 T 14-09-2016 IPR029069 HotDog domain AMK01_RS18565 aa968697b376809f0a242e1a9b28a2e9 162 PANTHER PTHR13078 13 155 3.5E-26 T 14-09-2016 AMK01_RS18565 aa968697b376809f0a242e1a9b28a2e9 162 SUPERFAMILY SSF54637 8 149 3.29E-33 T 14-09-2016 IPR029069 HotDog domain AMK01_RS00820 a87e32da01ecfd3f7c834938f33068e6 251 PANTHER PTHR21485:SF4 9 250 1.5E-86 T 14-09-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK01_RS00820 a87e32da01ecfd3f7c834938f33068e6 251 PANTHER PTHR21485 9 250 1.5E-86 T 14-09-2016 AMK01_RS00820 a87e32da01ecfd3f7c834938f33068e6 251 Gene3D G3DSA:3.90.550.10 8 249 4.8E-68 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS00820 a87e32da01ecfd3f7c834938f33068e6 251 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 7 247 34.051 T 14-09-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK01_RS00820 a87e32da01ecfd3f7c834938f33068e6 251 Pfam PF02348 Cytidylyltransferase 11 221 6.3E-40 T 14-09-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK01_RS00820 a87e32da01ecfd3f7c834938f33068e6 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 10 240 5.5E-62 T 14-09-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK01_RS00820 a87e32da01ecfd3f7c834938f33068e6 251 SUPERFAMILY SSF53448 9 249 8.21E-53 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS06315 72594b4c1f8c08e4304ec6fdd680e699 261 Gene3D G3DSA:3.20.20.370 55 251 3.2E-20 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS06315 72594b4c1f8c08e4304ec6fdd680e699 261 Pfam PF01522 Polysaccharide deacetylase 54 185 2.5E-15 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS06315 72594b4c1f8c08e4304ec6fdd680e699 261 SUPERFAMILY SSF88713 56 251 5.28E-22 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS21020 5a7fa76a6cae08900ffb16b5ed94ed03 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 283 1.9E-70 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS21020 5a7fa76a6cae08900ffb16b5ed94ed03 310 SUPERFAMILY SSF53686 5 299 3.27E-71 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS21020 5a7fa76a6cae08900ffb16b5ed94ed03 310 PANTHER PTHR10314 1 309 4.5E-126 T 14-09-2016 AMK01_RS21020 5a7fa76a6cae08900ffb16b5ed94ed03 310 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 31 44 - T 14-09-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMK01_RS21020 5a7fa76a6cae08900ffb16b5ed94ed03 310 PANTHER PTHR10314:SF85 1 309 4.5E-126 T 14-09-2016 AMK01_RS21020 5a7fa76a6cae08900ffb16b5ed94ed03 310 Gene3D G3DSA:3.40.50.1100 58 309 2.3E-63 T 14-09-2016 AMK01_RS20450 6f59aaad62e8b9817afad1acbd34c40b 79 Pfam PF11154 Protein of unknown function (DUF2934) 5 39 2.3E-13 T 14-09-2016 IPR021327 Protein of unknown function DUF2934 AMK01_RS12110 753c76984648f8ba31bc18c1ea9a0e12 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 111 3.9E-16 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS12110 753c76984648f8ba31bc18c1ea9a0e12 133 PANTHER PTHR33337:SF11 6 131 2.6E-22 T 14-09-2016 AMK01_RS12110 753c76984648f8ba31bc18c1ea9a0e12 133 PANTHER PTHR33337 6 131 2.6E-22 T 14-09-2016 AMK01_RS12110 753c76984648f8ba31bc18c1ea9a0e12 133 Gene3D G3DSA:3.90.1590.10 2 132 6.9E-38 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS12110 753c76984648f8ba31bc18c1ea9a0e12 133 SUPERFAMILY SSF51316 1 132 4.08E-41 T 14-09-2016 IPR011057 Mss4-like AMK01_RS11800 be5b6b1a91c04780d873ce2f8f4857d5 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 1.1E-48 T 14-09-2016 IPR004480 Monothiol glutaredoxin-related AMK01_RS11800 be5b6b1a91c04780d873ce2f8f4857d5 111 PANTHER PTHR10293 4 107 4.3E-70 T 14-09-2016 IPR004480 Monothiol glutaredoxin-related AMK01_RS11800 be5b6b1a91c04780d873ce2f8f4857d5 111 PANTHER PTHR10293:SF41 4 107 4.3E-70 T 14-09-2016 AMK01_RS11800 be5b6b1a91c04780d873ce2f8f4857d5 111 PIRSF PIRSF005894 1 108 6.0E-53 T 14-09-2016 IPR014434 Monothiol glutaredoxin AMK01_RS11800 be5b6b1a91c04780d873ce2f8f4857d5 111 Gene3D G3DSA:3.40.30.10 8 102 1.4E-36 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS11800 be5b6b1a91c04780d873ce2f8f4857d5 111 Pfam PF00462 Glutaredoxin 17 81 5.7E-20 T 14-09-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMK01_RS11800 be5b6b1a91c04780d873ce2f8f4857d5 111 SUPERFAMILY SSF52833 2 105 4.02E-37 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS08865 0c3540400491cb876b687b7dda51bb72 164 SUPERFAMILY SSF53271 7 152 6.96E-33 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS08865 0c3540400491cb876b687b7dda51bb72 164 Pfam PF00156 Phosphoribosyl transferase domain 13 153 1.3E-14 T 14-09-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK01_RS08865 0c3540400491cb876b687b7dda51bb72 164 PANTHER PTHR39563 5 162 8.1E-56 T 14-09-2016 AMK01_RS08865 0c3540400491cb876b687b7dda51bb72 164 Gene3D G3DSA:3.40.50.2020 9 158 1.3E-43 T 14-09-2016 IPR029057 Phosphoribosyltransferase-like AMK01_RS08865 0c3540400491cb876b687b7dda51bb72 164 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 4 163 41.522 T 14-09-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 AMK01_RS09620 8739bdbc0ec66b89071a793847196fb0 261 SUPERFAMILY SSF53474 8 241 1.36E-46 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS09620 8739bdbc0ec66b89071a793847196fb0 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.3E-7 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS09620 8739bdbc0ec66b89071a793847196fb0 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 2.3E-7 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS09620 8739bdbc0ec66b89071a793847196fb0 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 2.3E-7 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS09620 8739bdbc0ec66b89071a793847196fb0 261 PANTHER PTHR10992 14 240 3.3E-34 T 14-09-2016 AMK01_RS09620 8739bdbc0ec66b89071a793847196fb0 261 Pfam PF00561 alpha/beta hydrolase fold 30 133 1.1E-24 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS09620 8739bdbc0ec66b89071a793847196fb0 261 Gene3D G3DSA:3.40.50.1820 11 242 5.9E-47 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS16785 bb25f156501cb87cb2d1cf1ba365a88b 131 Pfam PF06823 Protein of unknown function (DUF1236) 69 131 5.3E-21 T 14-09-2016 IPR009642 Protein of unknown function DUF1236 AMK01_RS00450 27b394b0711fe467d4115a50e4813370 291 Gene3D G3DSA:3.90.1200.10 65 287 7.0E-34 T 14-09-2016 AMK01_RS00450 27b394b0711fe467d4115a50e4813370 291 SUPERFAMILY SSF56112 10 280 3.64E-42 T 14-09-2016 IPR011009 Protein kinase-like domain AMK01_RS00450 27b394b0711fe467d4115a50e4813370 291 PANTHER PTHR22603 15 289 8.4E-24 T 14-09-2016 AMK01_RS00450 27b394b0711fe467d4115a50e4813370 291 Pfam PF01633 Choline/ethanolamine kinase 40 216 5.2E-23 T 14-09-2016 AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 6.3E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 6.3E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 PANTHER PTHR11751:SF342 9 108 1.0E-27 T 14-09-2016 AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 Pfam PF07729 FCD domain 94 212 1.6E-21 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 SMART SM00895 92 214 1.8E-17 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 Gene3D G3DSA:1.20.120.530 88 219 1.1E-22 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 SUPERFAMILY SSF46785 2 76 1.64E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 SUPERFAMILY SSF48008 89 219 8.63E-22 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 9.5E-19 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 PANTHER PTHR11751 9 108 1.0E-27 T 14-09-2016 AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 SMART SM00345 13 72 8.3E-18 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS01875 a988cc7b6c726b7d1b28c30fc7b07901 225 Gene3D G3DSA:1.10.10.10 5 76 3.0E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS16010 b7f83177b120c0ed583350c754da62e2 392 Gene3D G3DSA:3.50.50.60 328 364 6.1E-27 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16010 b7f83177b120c0ed583350c754da62e2 392 Gene3D G3DSA:3.50.50.60 8 72 6.1E-27 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16010 b7f83177b120c0ed583350c754da62e2 392 Gene3D G3DSA:3.50.50.60 118 237 6.1E-27 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS16010 b7f83177b120c0ed583350c754da62e2 392 Pfam PF01266 FAD dependent oxidoreductase 17 362 7.9E-38 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS16010 b7f83177b120c0ed583350c754da62e2 392 PANTHER PTHR13847 4 348 6.1E-23 T 14-09-2016 AMK01_RS16010 b7f83177b120c0ed583350c754da62e2 392 Gene3D G3DSA:3.30.9.10 238 325 3.4E-9 T 14-09-2016 AMK01_RS16010 b7f83177b120c0ed583350c754da62e2 392 SUPERFAMILY SSF51905 9 364 3.75E-23 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS12095 bb0128fa788b4a5e81f6cc62fce46eb0 275 SUPERFAMILY SSF82171 3 273 9.42E-40 T 14-09-2016 AMK01_RS12095 bb0128fa788b4a5e81f6cc62fce46eb0 275 Pfam PF07676 WD40-like Beta Propeller Repeat 146 181 2.5E-9 T 14-09-2016 IPR011659 WD40-like Beta Propeller AMK01_RS12095 bb0128fa788b4a5e81f6cc62fce46eb0 275 Pfam PF07676 WD40-like Beta Propeller Repeat 102 136 2.0E-4 T 14-09-2016 IPR011659 WD40-like Beta Propeller AMK01_RS12095 bb0128fa788b4a5e81f6cc62fce46eb0 275 Gene3D G3DSA:2.120.10.30 4 270 2.2E-63 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS13650 b1f5b24640c6b5ea9f89abe213b3b272 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 272 1.0E-10 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13650 b1f5b24640c6b5ea9f89abe213b3b272 283 SUPERFAMILY SSF161098 11 283 1.3E-64 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13650 b1f5b24640c6b5ea9f89abe213b3b272 283 Gene3D G3DSA:1.10.3720.10 10 270 5.1E-56 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS13650 b1f5b24640c6b5ea9f89abe213b3b272 283 PANTHER PTHR32243 4 283 1.9E-81 T 14-09-2016 AMK01_RS27315 dd95648060bbad0b1d3496bb7d5f6640 214 SMART SM00847 31 120 8.0E-13 T 14-09-2016 IPR007502 Helicase-associated domain GO:0004386 AMK01_RS27315 dd95648060bbad0b1d3496bb7d5f6640 214 PANTHER PTHR18934 1 90 2.6E-13 T 14-09-2016 AMK01_RS27315 dd95648060bbad0b1d3496bb7d5f6640 214 Pfam PF04408 Helicase associated domain (HA2) 32 90 3.0E-9 T 14-09-2016 IPR007502 Helicase-associated domain GO:0004386 AMK01_RS11705 852eb20bb09e6e52514fe3fac6aa0192 192 Gene3D G3DSA:2.40.160.20 69 192 1.0E-20 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS11705 852eb20bb09e6e52514fe3fac6aa0192 192 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 104 191 6.1E-20 T 14-09-2016 IPR018550 Lipid A 3-O-deacylase-related AMK01_RS18670 9ac414981f9864a10131cf6dcff326f4 496 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 434 1.9E-107 T 14-09-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMK01_RS18670 9ac414981f9864a10131cf6dcff326f4 496 PANTHER PTHR33362:SF7 1 456 1.4E-218 T 14-09-2016 AMK01_RS18670 9ac414981f9864a10131cf6dcff326f4 496 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 438 1.5E-95 T 14-09-2016 IPR004681 TRAP transporter permease protein GO:0016021 AMK01_RS18670 9ac414981f9864a10131cf6dcff326f4 496 PANTHER PTHR33362 1 456 1.4E-218 T 14-09-2016 AMK01_RS01345 a359cb817086b3c08c96e3530ba62f3c 159 Gene3D G3DSA:3.10.129.10 9 147 2.1E-36 T 14-09-2016 IPR029069 HotDog domain AMK01_RS01345 a359cb817086b3c08c96e3530ba62f3c 159 Pfam PF07977 FabA-like domain 22 137 5.4E-17 T 14-09-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK01_RS01345 a359cb817086b3c08c96e3530ba62f3c 159 SUPERFAMILY SSF54637 9 148 2.3E-29 T 14-09-2016 IPR029069 HotDog domain AMK01_RS01345 a359cb817086b3c08c96e3530ba62f3c 159 PANTHER PTHR30272 1 151 9.8E-33 T 14-09-2016 AMK01_RS15050 a2610ffdb73d37bf9a987434b549415e 81 Gene3D G3DSA:2.60.40.920 34 73 6.2E-5 T 14-09-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 Pfam PF11812 Domain of unknown function (DUF3333) 23 173 7.1E-55 T 14-09-2016 IPR024573 Domain of unknown function DUF3333 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 PANTHER PTHR30425 24 64 4.1E-92 T 14-09-2016 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 PANTHER PTHR30425 187 439 4.1E-92 T 14-09-2016 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 PANTHER PTHR30425:SF2 24 64 4.1E-92 T 14-09-2016 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 PANTHER PTHR30425:SF2 187 439 4.1E-92 T 14-09-2016 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 240 439 1.9E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 SUPERFAMILY SSF161098 216 426 5.36E-35 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 Gene3D G3DSA:1.10.3720.10 39 62 8.8E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 Gene3D G3DSA:1.10.3720.10 197 439 8.8E-45 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02725 79980c98f3f6049798b96495ece7185e 440 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 198 437 1.4E-66 T 14-09-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AMK01_RS12990 d1f1d9582622bc841808ce91e70efa67 199 SMART SM01120 27 191 2.5E-58 T 14-09-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK01_RS12990 d1f1d9582622bc841808ce91e70efa67 199 PANTHER PTHR28629 2 195 9.5E-56 T 14-09-2016 AMK01_RS12990 d1f1d9582622bc841808ce91e70efa67 199 SUPERFAMILY SSF101473 4 192 6.28E-50 T 14-09-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK01_RS12990 d1f1d9582622bc841808ce91e70efa67 199 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 5 190 3.0E-59 T 14-09-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- AMK01_RS12990 d1f1d9582622bc841808ce91e70efa67 199 Pfam PF02734 DAK2 domain 27 190 1.3E-46 T 14-09-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK01_RS00690 f0322a8d50f662be77a437e9b8df0c82 54 Gene3D G3DSA:3.30.920.30 1 51 5.4E-18 T 14-09-2016 AMK01_RS00690 f0322a8d50f662be77a437e9b8df0c82 54 SUPERFAMILY SSF54786 1 51 8.24E-13 T 14-09-2016 AMK01_RS00690 f0322a8d50f662be77a437e9b8df0c82 54 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 1 48 3.2E-15 T 14-09-2016 IPR012933 HicA mRNA interferase family GO:0003729 AMK01_RS14830 3bef109857c9f555675535c44403f85d 290 PANTHER PTHR30514:SF3 5 286 2.3E-36 T 14-09-2016 AMK01_RS14830 3bef109857c9f555675535c44403f85d 290 SUPERFAMILY SSF46689 8 80 5.73E-17 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14830 3bef109857c9f555675535c44403f85d 290 PANTHER PTHR30514 5 286 2.3E-36 T 14-09-2016 AMK01_RS14830 3bef109857c9f555675535c44403f85d 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 79 4.1E-15 T 14-09-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMK01_RS14830 3bef109857c9f555675535c44403f85d 290 Gene3D G3DSA:1.10.10.10 6 80 2.9E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14830 3bef109857c9f555675535c44403f85d 290 SUPERFAMILY SSF53697 101 261 6.47E-19 T 14-09-2016 AMK01_RS14830 3bef109857c9f555675535c44403f85d 290 Pfam PF01380 SIS domain 133 259 7.2E-22 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS14830 3bef109857c9f555675535c44403f85d 290 Gene3D G3DSA:3.40.50.10490 113 275 3.6E-18 T 14-09-2016 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 9.2E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 9.2E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 9.2E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 9.2E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 PRINTS PR01703 Manganese superoxide dismutase signature 122 130 9.2E-23 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 14-09-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 194 6.0E-33 T 14-09-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 PIRSF PIRSF000349 1 200 1.3E-73 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 Gene3D G3DSA:1.10.287.990 20 85 1.3E-19 T 14-09-2016 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 SUPERFAMILY SSF46609 1 85 8.25E-31 T 14-09-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 PANTHER PTHR11404 1 200 3.3E-101 T 14-09-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 PANTHER PTHR11404:SF8 1 200 3.3E-101 T 14-09-2016 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 SUPERFAMILY SSF54719 88 199 7.99E-40 T 14-09-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS06200 72f60c80da6771ddd92e8d14ef3e57aa 200 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.2E-27 T 14-09-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK01_RS14325 d86440c5eb462413c94427bf7cc59696 204 Pfam PF01810 LysE type translocator 15 202 2.1E-28 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS14325 d86440c5eb462413c94427bf7cc59696 204 PANTHER PTHR30086 1 203 2.3E-27 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS21100 cb1fbd55c2fb8fc6652a918fbdc31ab0 462 PANTHER PTHR23519 368 457 8.9E-65 T 14-09-2016 AMK01_RS21100 cb1fbd55c2fb8fc6652a918fbdc31ab0 462 PANTHER PTHR23519 2 347 8.9E-65 T 14-09-2016 AMK01_RS21100 cb1fbd55c2fb8fc6652a918fbdc31ab0 462 Pfam PF11700 Vacuole effluxer Atg22 like 152 455 3.8E-28 T 14-09-2016 IPR024671 Autophagy-related protein 22-like AMK01_RS21100 cb1fbd55c2fb8fc6652a918fbdc31ab0 462 Pfam PF11700 Vacuole effluxer Atg22 like 64 148 5.5E-7 T 14-09-2016 IPR024671 Autophagy-related protein 22-like AMK01_RS21100 cb1fbd55c2fb8fc6652a918fbdc31ab0 462 SUPERFAMILY SSF103473 32 459 1.28E-29 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS21100 cb1fbd55c2fb8fc6652a918fbdc31ab0 462 Gene3D G3DSA:1.20.1250.20 255 456 2.2E-8 T 14-09-2016 AMK01_RS21100 cb1fbd55c2fb8fc6652a918fbdc31ab0 462 Gene3D G3DSA:1.20.1250.20 33 226 2.6E-8 T 14-09-2016 AMK01_RS08755 fc3403756ec663f7ef9888a6b90bd753 283 SUPERFAMILY SSF53335 40 225 8.9E-33 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS08755 fc3403756ec663f7ef9888a6b90bd753 283 PANTHER PTHR10108 45 217 1.3E-26 T 14-09-2016 AMK01_RS08755 fc3403756ec663f7ef9888a6b90bd753 283 Gene3D G3DSA:3.40.50.150 45 233 9.8E-32 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS08755 fc3403756ec663f7ef9888a6b90bd753 283 Pfam PF13649 Methyltransferase domain 58 151 2.6E-18 T 14-09-2016 AMK01_RS17285 de3f5438e2cf6e3a9b3ba5445abf6061 245 Pfam PF00149 Calcineurin-like phosphoesterase 18 209 9.0E-13 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS17285 de3f5438e2cf6e3a9b3ba5445abf6061 245 PANTHER PTHR24032:SF31 3 235 6.6E-25 T 14-09-2016 AMK01_RS17285 de3f5438e2cf6e3a9b3ba5445abf6061 245 PANTHER PTHR24032 3 235 6.6E-25 T 14-09-2016 AMK01_RS17285 de3f5438e2cf6e3a9b3ba5445abf6061 245 SUPERFAMILY SSF56300 16 235 1.16E-39 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS17285 de3f5438e2cf6e3a9b3ba5445abf6061 245 Gene3D G3DSA:3.60.21.10 17 240 3.2E-43 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS11515 a0325af63f5d4024dedd63112829d5dd 126 PANTHER PTHR13696 1 123 2.3E-15 T 14-09-2016 AMK01_RS11515 a0325af63f5d4024dedd63112829d5dd 126 SUPERFAMILY SSF117916 30 124 3.6E-32 T 14-09-2016 AMK01_RS11515 a0325af63f5d4024dedd63112829d5dd 126 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 29 125 2.3E-46 T 14-09-2016 IPR014291 SUF system FeS cluster assembly associated AMK01_RS11515 a0325af63f5d4024dedd63112829d5dd 126 Pfam PF01883 Domain of unknown function DUF59 31 103 1.1E-21 T 14-09-2016 IPR002744 Domain of unknown function DUF59 AMK01_RS16920 4ec2ebd0336d8594011654dc9833c828 189 PANTHER PTHR38590 39 178 6.7E-38 T 14-09-2016 AMK01_RS16920 4ec2ebd0336d8594011654dc9833c828 189 PANTHER PTHR38590:SF1 39 178 6.7E-38 T 14-09-2016 AMK01_RS16920 4ec2ebd0336d8594011654dc9833c828 189 Pfam PF04480 Protein of unknown function (DUF559) 67 169 7.3E-37 T 14-09-2016 IPR007569 Domain of unknown function DUF559 AMK01_RS16920 4ec2ebd0336d8594011654dc9833c828 189 SUPERFAMILY SSF52980 67 174 1.23E-18 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AMK01_RS16920 4ec2ebd0336d8594011654dc9833c828 189 Gene3D G3DSA:3.40.960.10 130 174 7.9E-4 T 14-09-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMK01_RS01790 38d6f1af5209f1818f007bd0f5d28e92 167 Pfam PF05899 Protein of unknown function (DUF861) 65 136 1.7E-19 T 14-09-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AMK01_RS01790 38d6f1af5209f1818f007bd0f5d28e92 167 SUPERFAMILY SSF51182 38 142 3.18E-20 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS01790 38d6f1af5209f1818f007bd0f5d28e92 167 Gene3D G3DSA:2.60.120.10 42 140 2.5E-31 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS01790 38d6f1af5209f1818f007bd0f5d28e92 167 PANTHER PTHR40943 29 146 1.4E-13 T 14-09-2016 AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 PANTHER PTHR16254 1 389 5.5E-186 T 14-09-2016 AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 477 493 - T 14-09-2016 IPR018488 Cyclic nucleotide-binding, conserved site AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 512 529 - T 14-09-2016 IPR018488 Cyclic nucleotide-binding, conserved site AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 SMART SM00100 450 562 1.3E-19 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 PANTHER PTHR16254:SF17 1 389 5.5E-186 T 14-09-2016 AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 390 2.8E-67 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 Gene3D G3DSA:2.60.120.10 440 565 1.2E-30 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 Pfam PF00027 Cyclic nucleotide-binding domain 470 549 1.1E-18 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS19435 80d4593dbf2278bc35befb4242455f55 581 SUPERFAMILY SSF51206 438 564 2.36E-30 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AMK01_RS16395 162746cda5f616bbc9145e6764f03646 310 Gene3D G3DSA:3.10.180.10 4 124 5.2E-29 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS16395 162746cda5f616bbc9145e6764f03646 310 Gene3D G3DSA:3.10.180.10 188 308 2.2E-36 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS16395 162746cda5f616bbc9145e6764f03646 310 PANTHER PTHR36110 3 308 2.3E-102 T 14-09-2016 AMK01_RS16395 162746cda5f616bbc9145e6764f03646 310 SUPERFAMILY SSF54593 4 283 5.65E-46 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS16395 162746cda5f616bbc9145e6764f03646 310 PANTHER PTHR36110:SF2 3 308 2.3E-102 T 14-09-2016 AMK01_RS16395 162746cda5f616bbc9145e6764f03646 310 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 268 9.1E-23 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS16120 c3ce2d59807fa56ca5640cc4b139d343 354 PANTHER PTHR30036:SF0 1 354 3.4E-190 T 14-09-2016 AMK01_RS16120 c3ce2d59807fa56ca5640cc4b139d343 354 PANTHER PTHR30036 1 354 3.4E-190 T 14-09-2016 AMK01_RS16120 c3ce2d59807fa56ca5640cc4b139d343 354 SUPERFAMILY SSF53822 27 341 1.96E-69 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS16120 c3ce2d59807fa56ca5640cc4b139d343 354 Gene3D G3DSA:3.40.50.2300 143 341 4.6E-37 T 14-09-2016 AMK01_RS16120 c3ce2d59807fa56ca5640cc4b139d343 354 Gene3D G3DSA:3.40.50.2300 24 142 1.4E-28 T 14-09-2016 AMK01_RS16120 c3ce2d59807fa56ca5640cc4b139d343 354 Pfam PF13407 Periplasmic binding protein domain 30 307 6.5E-63 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS15945 5815156ec981e13facf59b992ddc69f5 442 Gene3D G3DSA:3.90.190.10 315 428 5.7E-10 T 14-09-2016 IPR029021 Protein-tyrosine phosphatase-like AMK01_RS15945 5815156ec981e13facf59b992ddc69f5 442 Pfam PF14378 PAP2 superfamily 72 202 2.7E-6 T 14-09-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMK01_RS15945 5815156ec981e13facf59b992ddc69f5 442 SUPERFAMILY SSF52799 293 423 5.23E-12 T 14-09-2016 IPR029021 Protein-tyrosine phosphatase-like AMK01_RS02930 86a7aada7e499637f7a2a472af1bb067 95 Gene3D G3DSA:3.30.70.1060 12 79 1.1E-8 T 14-09-2016 AMK01_RS02930 86a7aada7e499637f7a2a472af1bb067 95 Pfam PF03795 YCII-related domain 2 75 7.3E-6 T 14-09-2016 IPR005545 YCII-related AMK01_RS02930 86a7aada7e499637f7a2a472af1bb067 95 SUPERFAMILY SSF54909 1 80 5.63E-13 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS01475 e43b67bd6c5cab8f146d424194a283d6 271 PANTHER PTHR16138 38 271 2.8E-69 T 14-09-2016 AMK01_RS01475 e43b67bd6c5cab8f146d424194a283d6 271 SUPERFAMILY SSF53474 25 256 2.13E-39 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS01475 e43b67bd6c5cab8f146d424194a283d6 271 Pfam PF12697 Alpha/beta hydrolase family 61 245 5.2E-13 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS01475 e43b67bd6c5cab8f146d424194a283d6 271 Gene3D G3DSA:3.40.50.1820 197 261 3.0E-33 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS01475 e43b67bd6c5cab8f146d424194a283d6 271 Gene3D G3DSA:3.40.50.1820 36 149 3.0E-33 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS11920 082f1591366fcd7ab6bd2eaaaf7f1dc5 340 Pfam PF04347 Flagellar biosynthesis protein, FliO 46 111 5.7E-10 T 14-09-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AMK01_RS01450 e287adb47f5946186f01486599e050fd 296 SUPERFAMILY SSF103481 197 292 1.15E-7 T 14-09-2016 AMK01_RS01450 e287adb47f5946186f01486599e050fd 296 PANTHER PTHR22911:SF37 25 296 7.3E-51 T 14-09-2016 AMK01_RS01450 e287adb47f5946186f01486599e050fd 296 PANTHER PTHR22911 25 296 7.3E-51 T 14-09-2016 AMK01_RS01450 e287adb47f5946186f01486599e050fd 296 SUPERFAMILY SSF103481 59 149 1.7E-5 T 14-09-2016 AMK01_RS01450 e287adb47f5946186f01486599e050fd 296 Pfam PF00892 EamA-like transporter family 161 289 6.8E-14 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS00090 1d843ce0e00a2dc263dc5a99e6ed1617 425 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 405 1.0E-201 T 14-09-2016 IPR010915 Polyhydroxyalkanoate depolymerase AMK01_RS00090 1d843ce0e00a2dc263dc5a99e6ed1617 425 Gene3D G3DSA:3.40.50.1820 89 406 8.4E-8 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS00090 1d843ce0e00a2dc263dc5a99e6ed1617 425 PIRSF PIRSF020818 1 418 9.6E-199 T 14-09-2016 IPR010915 Polyhydroxyalkanoate depolymerase AMK01_RS00090 1d843ce0e00a2dc263dc5a99e6ed1617 425 SUPERFAMILY SSF53474 90 404 4.62E-26 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS00090 1d843ce0e00a2dc263dc5a99e6ed1617 425 Pfam PF06850 PHB de-polymerase C-terminus 206 406 3.1E-102 T 14-09-2016 IPR009656 PHB de-polymerase, C-terminal AMK01_RS07845 17e36b58bc80f577b10057fb6d990e3a 97 SUPERFAMILY SSF47413 2 61 3.1E-7 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS07845 17e36b58bc80f577b10057fb6d990e3a 97 Pfam PF01381 Helix-turn-helix 8 40 2.0E-5 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS07845 17e36b58bc80f577b10057fb6d990e3a 97 Gene3D G3DSA:1.10.260.40 5 39 3.3E-7 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS07690 8b0a660a859dd8647bc2982cff5fa772 158 Pfam PF03477 ATP cone domain 50 134 2.2E-14 T 14-09-2016 IPR005144 ATP-cone domain AMK01_RS07690 8b0a660a859dd8647bc2982cff5fa772 158 PANTHER PTHR30455 2 156 1.0E-55 T 14-09-2016 AMK01_RS07690 8b0a660a859dd8647bc2982cff5fa772 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 1.2E-44 T 14-09-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMK01_RS07690 8b0a660a859dd8647bc2982cff5fa772 158 PANTHER PTHR30455:SF2 2 156 1.0E-55 T 14-09-2016 AMK01_RS07690 8b0a660a859dd8647bc2982cff5fa772 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 82.154 T 14-09-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMK01_RS13280 b261f2ad47e6845004720b1225dfc2e5 270 Gene3D G3DSA:3.30.1380.10 61 269 4.2E-7 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 PANTHER PTHR12128:SF29 7 304 3.9E-106 T 14-09-2016 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 PANTHER PTHR12128 7 304 3.9E-106 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 SMART SM01130 7 302 1.5E-59 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 PIRSF PIRSF001365 5 308 3.1E-49 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 SUPERFAMILY SSF51569 5 300 1.26E-61 T 14-09-2016 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 6.5E-6 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 6.5E-6 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 6.5E-6 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 Gene3D G3DSA:3.20.20.70 6 302 3.7E-66 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS19930 9026fcaceba867916f9eb8e04804df9e 310 Pfam PF00701 Dihydrodipicolinate synthetase family 9 297 5.0E-30 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS09200 956049dd3161ff6180618b8414d37a46 63 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 3.6E-23 T 14-09-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMK01_RS09200 956049dd3161ff6180618b8414d37a46 63 PANTHER PTHR33162 1 48 2.4E-15 T 14-09-2016 AMK01_RS09200 956049dd3161ff6180618b8414d37a46 63 Pfam PF02416 mttA/Hcf106 family 4 48 5.5E-13 T 14-09-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMK01_RS09200 956049dd3161ff6180618b8414d37a46 63 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 63 22.651 T 14-09-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMK01_RS15575 36901f30e888842bed1ae0f9e53e17c8 690 PANTHER PTHR37947 8 674 1.5E-52 T 14-09-2016 AMK01_RS15575 36901f30e888842bed1ae0f9e53e17c8 690 Gene3D G3DSA:3.40.50.880 257 511 2.8E-36 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS15575 36901f30e888842bed1ae0f9e53e17c8 690 SUPERFAMILY SSF52317 258 512 3.66E-55 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 432 1.1E-152 T 14-09-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 PANTHER PTHR36842 13 436 2.3E-59 T 14-09-2016 AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 2.5E-6 T 14-09-2016 IPR011659 WD40-like Beta Propeller AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 Pfam PF07676 WD40-like Beta Propeller Repeat 372 408 6.5E-7 T 14-09-2016 IPR011659 WD40-like Beta Propeller AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 Pfam PF07676 WD40-like Beta Propeller Repeat 285 320 1.7E-9 T 14-09-2016 IPR011659 WD40-like Beta Propeller AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 Pfam PF07676 WD40-like Beta Propeller Repeat 329 362 2.2E-4 T 14-09-2016 IPR011659 WD40-like Beta Propeller AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 Gene3D G3DSA:2.130.10.10 155 433 5.1E-79 T 14-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 SUPERFAMILY SSF52964 36 164 2.48E-42 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 SUPERFAMILY SSF69304 161 433 1.83E-58 T 14-09-2016 AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 Hamap MF_00671 Protein TolB [tolB]. 10 431 33.514 T 14-09-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 Pfam PF04052 TolB amino-terminal domain 30 132 3.9E-35 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK01_RS17870 8fee54a65cc80803833fbffff2e5da55 436 Gene3D G3DSA:3.40.50.10070 30 154 3.5E-53 T 14-09-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMK01_RS01865 1da1a1381780218805195b095e560ca9 510 SUPERFAMILY SSF53474 44 488 7.09E-61 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS01865 1da1a1381780218805195b095e560ca9 510 PANTHER PTHR11802 96 234 2.3E-12 T 14-09-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 AMK01_RS01865 1da1a1381780218805195b095e560ca9 510 Pfam PF00450 Serine carboxypeptidase 79 223 8.7E-16 T 14-09-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 AMK01_RS01865 1da1a1381780218805195b095e560ca9 510 Gene3D G3DSA:3.40.50.1820 51 467 9.3E-47 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS01865 1da1a1381780218805195b095e560ca9 510 PANTHER PTHR11802:SF30 96 234 2.3E-12 T 14-09-2016 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 SUPERFAMILY SSF55681 100 344 1.42E-77 T 14-09-2016 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 PANTHER PTHR11538 90 340 3.5E-98 T 14-09-2016 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 PANTHER PTHR11538 40 52 3.5E-98 T 14-09-2016 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 Pfam PF01409 tRNA synthetases class II core domain (F) 92 343 2.1E-102 T 14-09-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 344 45.124 T 14-09-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 Gene3D G3DSA:3.30.930.10 10 344 3.4E-124 T 14-09-2016 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 SUPERFAMILY SSF46589 12 99 2.98E-20 T 14-09-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.1E-21 T 14-09-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK01_RS01495 8d0fb71138b9df48f89d781fda63d597 360 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 343 2.4E-100 T 14-09-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK01_RS03980 1d8df3ea887d130263ec233ee401dc7e 233 Pfam PF08889 WbqC-like protein family 9 226 5.9E-63 T 14-09-2016 IPR014985 WbqC-like protein family AMK01_RS07720 01fbe18107d10226bf55efe1a3e0cc89 151 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 10 144 1.5E-29 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07720 01fbe18107d10226bf55efe1a3e0cc89 151 Gene3D G3DSA:3.40.50.960 5 149 7.2E-49 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07720 01fbe18107d10226bf55efe1a3e0cc89 151 PANTHER PTHR21058 9 149 6.8E-39 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07720 01fbe18107d10226bf55efe1a3e0cc89 151 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 8 146 1.0E-42 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07720 01fbe18107d10226bf55efe1a3e0cc89 151 SUPERFAMILY SSF52121 7 149 1.44E-47 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS07720 01fbe18107d10226bf55efe1a3e0cc89 151 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 2 149 24.05 T 14-09-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK01_RS24410 eea1b622afb676cf9723731aec841d15 63 Gene3D G3DSA:1.20.1250.20 2 50 1.8E-6 T 14-09-2016 AMK01_RS24410 eea1b622afb676cf9723731aec841d15 63 SUPERFAMILY SSF103473 2 55 5.1E-8 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS04395 565f4994e022cbff7233a16ce54fda13 403 Pfam PF07486 Cell Wall Hydrolase 285 395 1.1E-25 T 14-09-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 AMK01_RS04395 565f4994e022cbff7233a16ce54fda13 403 PANTHER PTHR21666 269 396 4.1E-27 T 14-09-2016 AMK01_RS04395 565f4994e022cbff7233a16ce54fda13 403 PANTHER PTHR21666:SF178 269 396 4.1E-27 T 14-09-2016 AMK01_RS09095 04f3fd1d18c6255a40539c7e541bbe77 105 Pfam PF09656 Putative transmembrane protein (PGPGW) 45 93 2.7E-5 T 14-09-2016 IPR019099 Uncharacterised protein family PGPGW, transmembrane AMK01_RS11630 18e0ff1606de31c398ee1a7b78c05180 241 Pfam PF10016 Predicted secreted protein (DUF2259) 43 240 2.2E-45 T 14-09-2016 IPR018725 Protein of unknown function DUF2259, secreted AMK01_RS09180 467d81e6be8308ff36646eee9535d772 1053 Pfam PF05036 Sporulation related domain 973 1051 6.1E-13 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AMK01_RS09180 467d81e6be8308ff36646eee9535d772 1053 Gene3D G3DSA:3.30.70.1070 969 1051 4.4E-4 T 14-09-2016 IPR007730 Sporulation-related domain GO:0042834 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 SUPERFAMILY SSF55021 177 277 1.97E-24 T 14-09-2016 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 Gene3D G3DSA:3.40.190.10 93 170 1.2E-26 T 14-09-2016 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 Gene3D G3DSA:3.40.190.10 4 92 2.6E-28 T 14-09-2016 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 PIRSF PIRSF001500 2 280 4.2E-63 T 14-09-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 Pfam PF00800 Prephenate dehydratase 8 184 3.5E-54 T 14-09-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 158 180 - T 14-09-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 SUPERFAMILY SSF53850 7 188 2.35E-61 T 14-09-2016 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 PANTHER PTHR21022 1 275 8.2E-96 T 14-09-2016 AMK01_RS00815 fc8512e59a62bd5f2dbae2433ef16877 284 Gene3D G3DSA:3.30.70.260 194 276 1.0E-25 T 14-09-2016 AMK01_RS19635 2dac6d1c6412d7359f278c6c5f0e6ce1 341 PIRSF PIRSF031900 1 332 6.5E-124 T 14-09-2016 IPR014567 Uncharacterised conserved protein UCP031900 AMK01_RS19635 2dac6d1c6412d7359f278c6c5f0e6ce1 341 Pfam PF13449 Esterase-like activity of phytase 66 317 1.3E-34 T 14-09-2016 IPR027372 Phytase-like domain AMK01_RS19635 2dac6d1c6412d7359f278c6c5f0e6ce1 341 PANTHER PTHR41519:SF1 20 333 5.8E-22 T 14-09-2016 AMK01_RS19635 2dac6d1c6412d7359f278c6c5f0e6ce1 341 PANTHER PTHR41519 20 333 5.8E-22 T 14-09-2016 AMK01_RS14705 8dad90afa6afd250a91012a799489881 313 Gene3D G3DSA:1.10.530.10 201 298 5.1E-22 T 14-09-2016 AMK01_RS14705 8dad90afa6afd250a91012a799489881 313 PANTHER PTHR21666 182 310 1.4E-13 T 14-09-2016 AMK01_RS14705 8dad90afa6afd250a91012a799489881 313 Pfam PF01464 Transglycosylase SLT domain 202 295 3.1E-16 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AMK01_RS14705 8dad90afa6afd250a91012a799489881 313 SUPERFAMILY SSF53955 201 306 1.32E-25 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS01170 fb5beca808b3fb75dc95bad2f0d8899c 170 PANTHER PTHR36506:SF1 1 119 5.3E-23 T 14-09-2016 AMK01_RS01170 fb5beca808b3fb75dc95bad2f0d8899c 170 PANTHER PTHR36506 1 119 5.3E-23 T 14-09-2016 AMK01_RS01170 fb5beca808b3fb75dc95bad2f0d8899c 170 Pfam PF01478 Type IV leader peptidase family 9 110 2.5E-14 T 14-09-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMK01_RS23420 70605df6f717dc55c20efd8fb61c586c 255 Pfam PF03547 Membrane transport protein 138 255 1.1E-8 T 14-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK01_RS23420 70605df6f717dc55c20efd8fb61c586c 255 Pfam PF03547 Membrane transport protein 4 135 8.4E-13 T 14-09-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK01_RS23420 70605df6f717dc55c20efd8fb61c586c 255 PANTHER PTHR31752:SF13 71 255 1.1E-20 T 14-09-2016 AMK01_RS23420 70605df6f717dc55c20efd8fb61c586c 255 PANTHER PTHR31752 71 255 1.1E-20 T 14-09-2016 AMK01_RS02210 a950633cdb26548fee58cedcce1e3608 210 Gene3D G3DSA:2.60.450.10 41 196 2.7E-33 T 14-09-2016 AMK01_RS02210 a950633cdb26548fee58cedcce1e3608 210 PANTHER PTHR36504 13 92 3.3E-18 T 14-09-2016 AMK01_RS02210 a950633cdb26548fee58cedcce1e3608 210 PANTHER PTHR36504 118 208 3.3E-18 T 14-09-2016 AMK01_RS02210 a950633cdb26548fee58cedcce1e3608 210 Pfam PF03968 OstA-like protein 49 183 4.3E-21 T 14-09-2016 IPR005653 Organic solvent tolerance-like, N-terminal AMK01_RS03195 611cd4ddeb458e46e246d057e4b1e6a9 197 PANTHER PTHR30328:SF3 3 193 1.3E-45 T 14-09-2016 AMK01_RS03195 611cd4ddeb458e46e246d057e4b1e6a9 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.0E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS03195 611cd4ddeb458e46e246d057e4b1e6a9 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.0E-10 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS03195 611cd4ddeb458e46e246d057e4b1e6a9 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.1E-16 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS03195 611cd4ddeb458e46e246d057e4b1e6a9 197 PANTHER PTHR30328 3 193 1.3E-45 T 14-09-2016 AMK01_RS03195 611cd4ddeb458e46e246d057e4b1e6a9 197 SUPERFAMILY SSF46689 3 84 9.23E-19 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS03195 611cd4ddeb458e46e246d057e4b1e6a9 197 Gene3D G3DSA:1.10.357.10 2 192 2.9E-35 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS14825 1766d7862e56f5d8ba9b6cee3cea661f 256 Gene3D G3DSA:3.40.630.40 19 255 1.3E-79 T 14-09-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK01_RS14825 1766d7862e56f5d8ba9b6cee3cea661f 256 Pfam PF05013 N-formylglutamate amidohydrolase 26 233 4.4E-43 T 14-09-2016 IPR007709 N-formylglutamate amidohydrolase AMK01_RS14825 1766d7862e56f5d8ba9b6cee3cea661f 256 SUPERFAMILY SSF53187 15 255 2.42E-75 T 14-09-2016 AMK01_RS14825 1766d7862e56f5d8ba9b6cee3cea661f 256 PIRSF PIRSF029730 4 256 8.1E-97 T 14-09-2016 IPR011227 Uncharacterised conserved protein UCP029730 AMK01_RS13595 4816583bda5baa86e3ced96d0eaa0409 786 SUPERFAMILY SSF158472 456 503 7.98E-7 T 14-09-2016 AMK01_RS13595 4816583bda5baa86e3ced96d0eaa0409 786 SMART SM00331 565 785 2.7E-39 T 14-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK01_RS13595 4816583bda5baa86e3ced96d0eaa0409 786 Pfam PF00672 HAMP domain 436 502 2.5E-11 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS13595 4816583bda5baa86e3ced96d0eaa0409 786 SMART SM00304 455 507 6.3E-10 T 14-09-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK01_RS13595 4816583bda5baa86e3ced96d0eaa0409 786 Gene3D G3DSA:3.30.450.20 251 418 7.5E-16 T 14-09-2016 AMK01_RS13595 4816583bda5baa86e3ced96d0eaa0409 786 PANTHER PTHR21021 41 59 9.8E-34 T 14-09-2016 AMK01_RS13595 4816583bda5baa86e3ced96d0eaa0409 786 PANTHER PTHR21021 541 786 9.8E-34 T 14-09-2016 AMK01_RS13595 4816583bda5baa86e3ced96d0eaa0409 786 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 591 785 1.8E-35 T 14-09-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK01_RS14600 7341bad5c24ae7844c4cca2985a3812f 309 SUPERFAMILY SSF51735 1 309 1.4E-72 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14600 7341bad5c24ae7844c4cca2985a3812f 309 Gene3D G3DSA:3.40.50.720 1 309 8.9E-63 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS14600 7341bad5c24ae7844c4cca2985a3812f 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 226 6.9E-34 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS14600 7341bad5c24ae7844c4cca2985a3812f 309 PANTHER PTHR10366 2 309 3.9E-106 T 14-09-2016 AMK01_RS14600 7341bad5c24ae7844c4cca2985a3812f 309 PANTHER PTHR10366:SF329 2 309 3.9E-106 T 14-09-2016 AMK01_RS19690 bcc0bbfc0f84d998f1045138f436facc 74 Pfam PF01206 Sulfurtransferase TusA 6 73 2.3E-22 T 14-09-2016 IPR001455 TusA-like domain AMK01_RS19690 bcc0bbfc0f84d998f1045138f436facc 74 SUPERFAMILY SSF64307 5 73 2.35E-22 T 14-09-2016 IPR001455 TusA-like domain AMK01_RS19690 bcc0bbfc0f84d998f1045138f436facc 74 Gene3D G3DSA:3.30.110.40 7 73 4.6E-24 T 14-09-2016 IPR001455 TusA-like domain AMK01_RS19690 bcc0bbfc0f84d998f1045138f436facc 74 PANTHER PTHR33279 7 74 9.1E-16 T 14-09-2016 AMK01_RS01315 b7f025727958e38b137b5f2d801c7a1d 411 Pfam PF08421 Putative zinc binding domain 6 67 4.2E-25 T 14-09-2016 IPR013630 Methyltransferase putative zinc binding domain KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 AMK01_RS01315 b7f025727958e38b137b5f2d801c7a1d 411 SUPERFAMILY SSF53335 64 251 7.09E-25 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS01315 b7f025727958e38b137b5f2d801c7a1d 411 Pfam PF08484 C-methyltransferase C-terminal domain 246 405 1.9E-63 T 14-09-2016 IPR013691 C-methyltransferase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 AMK01_RS01315 b7f025727958e38b137b5f2d801c7a1d 411 PANTHER PTHR10108:SF714 35 295 1.5E-48 T 14-09-2016 AMK01_RS01315 b7f025727958e38b137b5f2d801c7a1d 411 PANTHER PTHR10108 35 295 1.5E-48 T 14-09-2016 AMK01_RS01315 b7f025727958e38b137b5f2d801c7a1d 411 Pfam PF13489 Methyltransferase domain 93 239 4.1E-12 T 14-09-2016 AMK01_RS01315 b7f025727958e38b137b5f2d801c7a1d 411 Gene3D G3DSA:3.40.50.150 92 270 5.0E-26 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS13175 2f750d53defcb02d0c48c6d03d5de91e 128 Gene3D G3DSA:3.40.630.30 12 120 5.1E-24 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS13175 2f750d53defcb02d0c48c6d03d5de91e 128 PANTHER PTHR23091 12 120 5.6E-14 T 14-09-2016 AMK01_RS13175 2f750d53defcb02d0c48c6d03d5de91e 128 SUPERFAMILY SSF55729 12 121 6.65E-24 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS13175 2f750d53defcb02d0c48c6d03d5de91e 128 Pfam PF00583 Acetyltransferase (GNAT) family 44 117 3.9E-14 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS10440 e771c2ad17a42ac0cd4bdecb13eddf4e 193 Gene3D G3DSA:3.40.50.360 1 193 1.1E-38 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS10440 e771c2ad17a42ac0cd4bdecb13eddf4e 193 PANTHER PTHR10204 1 134 3.6E-26 T 14-09-2016 AMK01_RS10440 e771c2ad17a42ac0cd4bdecb13eddf4e 193 Pfam PF02525 Flavodoxin-like fold 1 138 1.1E-30 T 14-09-2016 IPR003680 Flavodoxin-like fold AMK01_RS10440 e771c2ad17a42ac0cd4bdecb13eddf4e 193 SUPERFAMILY SSF52218 1 193 6.37E-42 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS11845 960f73ab2adced20ef319e13ac63a2fb 503 PIRSF PIRSF034081 1 503 4.9E-282 T 14-09-2016 IPR014588 ATPase, Atu1862 type, predicted AMK01_RS11845 960f73ab2adced20ef319e13ac63a2fb 503 Pfam PF01935 Domain of unknown function DUF87 10 75 1.8E-9 T 14-09-2016 IPR002789 Helicase HerA, central domain AMK01_RS11845 960f73ab2adced20ef319e13ac63a2fb 503 SUPERFAMILY SSF52540 7 249 5.0E-27 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11845 960f73ab2adced20ef319e13ac63a2fb 503 Gene3D G3DSA:3.40.50.300 4 249 9.9E-30 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS11845 960f73ab2adced20ef319e13ac63a2fb 503 SMART SM00382 23 283 4.5E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 PANTHER PTHR30537:SF26 1 304 1.0E-89 T 14-09-2016 AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 SUPERFAMILY SSF46785 5 86 9.8E-16 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 PANTHER PTHR30537 1 304 1.0E-89 T 14-09-2016 AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 Pfam PF03466 LysR substrate binding domain 93 299 5.1E-39 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.0E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.0E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.0E-5 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 Gene3D G3DSA:3.40.190.10 97 195 6.3E-33 T 14-09-2016 AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.0E-16 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 SUPERFAMILY SSF53850 95 300 7.96E-42 T 14-09-2016 AMK01_RS09895 743515f30ccf2c80f6d323017fa2340c 308 Gene3D G3DSA:1.10.10.10 5 88 7.4E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19015 aa39301e3fdb71ace815e95fff6cdaa6 276 PANTHER PTHR32243 4 276 3.1E-117 T 14-09-2016 AMK01_RS19015 aa39301e3fdb71ace815e95fff6cdaa6 276 SUPERFAMILY SSF161098 10 276 1.18E-61 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19015 aa39301e3fdb71ace815e95fff6cdaa6 276 PANTHER PTHR32243:SF11 4 276 3.1E-117 T 14-09-2016 AMK01_RS19015 aa39301e3fdb71ace815e95fff6cdaa6 276 Gene3D G3DSA:1.10.3720.10 7 264 6.4E-55 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19015 aa39301e3fdb71ace815e95fff6cdaa6 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 268 6.3E-19 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15515 e4d5a5ac932a39eb8e618c8fa7c813a6 153 Pfam PF00588 SpoU rRNA Methylase family 4 142 3.6E-30 T 14-09-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK01_RS15515 e4d5a5ac932a39eb8e618c8fa7c813a6 153 SUPERFAMILY SSF75217 3 150 1.96E-38 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AMK01_RS15515 e4d5a5ac932a39eb8e618c8fa7c813a6 153 PANTHER PTHR12029:SF31 4 149 3.1E-51 T 14-09-2016 AMK01_RS15515 e4d5a5ac932a39eb8e618c8fa7c813a6 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 4 153 28.411 T 14-09-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMK01_RS15515 e4d5a5ac932a39eb8e618c8fa7c813a6 153 PANTHER PTHR12029 4 149 3.1E-51 T 14-09-2016 AMK01_RS15515 e4d5a5ac932a39eb8e618c8fa7c813a6 153 PIRSF PIRSF029256 3 153 8.1E-55 T 14-09-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMK01_RS15515 e4d5a5ac932a39eb8e618c8fa7c813a6 153 Gene3D G3DSA:3.40.1280.10 2 150 2.1E-48 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK01_RS06450 3b63d37f901221c7756fefb4066430e6 482 SMART SM00283 25 290 1.3E-16 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS06450 3b63d37f901221c7756fefb4066430e6 482 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 124 276 6.7E-26 T 14-09-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AMK01_RS06450 3b63d37f901221c7756fefb4066430e6 482 Gene3D G3DSA:1.10.287.950 63 262 2.5E-39 T 14-09-2016 AMK01_RS06450 3b63d37f901221c7756fefb4066430e6 482 SUPERFAMILY SSF58104 30 306 3.14E-46 T 14-09-2016 AMK01_RS06450 3b63d37f901221c7756fefb4066430e6 482 PANTHER PTHR32089 23 297 2.7E-41 T 14-09-2016 AMK01_RS03790 d997dad506bbb9cdc0ed36482e862bfa 303 SUPERFAMILY SSF161098 7 298 1.31E-57 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03790 d997dad506bbb9cdc0ed36482e862bfa 303 Gene3D G3DSA:1.10.3720.10 7 292 1.2E-56 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03790 d997dad506bbb9cdc0ed36482e862bfa 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 294 1.6E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS03790 d997dad506bbb9cdc0ed36482e862bfa 303 PANTHER PTHR30193 12 51 5.8E-123 T 14-09-2016 AMK01_RS03790 d997dad506bbb9cdc0ed36482e862bfa 303 PANTHER PTHR30193 67 301 5.8E-123 T 14-09-2016 AMK01_RS03790 d997dad506bbb9cdc0ed36482e862bfa 303 PANTHER PTHR30193:SF5 12 51 5.8E-123 T 14-09-2016 AMK01_RS03790 d997dad506bbb9cdc0ed36482e862bfa 303 PANTHER PTHR30193:SF5 67 301 5.8E-123 T 14-09-2016 AMK01_RS10640 cd71bc2bcd510e87689c6543aaebe752 430 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 326 1.4E-19 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS10640 cd71bc2bcd510e87689c6543aaebe752 430 PANTHER PTHR30572:SF1 61 400 1.1E-79 T 14-09-2016 AMK01_RS10640 cd71bc2bcd510e87689c6543aaebe752 430 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 72 349 3.7E-47 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS10640 cd71bc2bcd510e87689c6543aaebe752 430 Gene3D G3DSA:2.40.50.100 91 125 5.7E-14 T 14-09-2016 AMK01_RS10640 cd71bc2bcd510e87689c6543aaebe752 430 Gene3D G3DSA:2.40.50.100 214 240 5.7E-14 T 14-09-2016 AMK01_RS10640 cd71bc2bcd510e87689c6543aaebe752 430 SUPERFAMILY SSF111369 80 330 6.41E-25 T 14-09-2016 AMK01_RS10640 cd71bc2bcd510e87689c6543aaebe752 430 PANTHER PTHR30572 61 400 1.1E-79 T 14-09-2016 AMK01_RS14095 212cca46c3aecda6190213689f545eb4 221 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 157 208 2.0E-5 T 14-09-2016 AMK01_RS14095 212cca46c3aecda6190213689f545eb4 221 SUPERFAMILY SSF46689 14 73 2.65E-11 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14095 212cca46c3aecda6190213689f545eb4 221 Gene3D G3DSA:1.10.10.60 12 57 6.2E-18 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14095 212cca46c3aecda6190213689f545eb4 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 1.1E-7 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS14095 212cca46c3aecda6190213689f545eb4 221 Gene3D G3DSA:1.10.357.10 58 217 1.1E-51 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS11430 2b425b37804278932026f535f1ffe2d9 104 PANTHER PTHR30561 1 103 1.7E-49 T 14-09-2016 AMK01_RS11430 2b425b37804278932026f535f1ffe2d9 104 SUPERFAMILY SSF103481 5 102 6.54E-19 T 14-09-2016 AMK01_RS11430 2b425b37804278932026f535f1ffe2d9 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.5E-28 T 14-09-2016 IPR000390 Small multidrug resistance protein family GO:0016021 AMK01_RS11430 2b425b37804278932026f535f1ffe2d9 104 PANTHER PTHR30561:SF0 1 103 1.7E-49 T 14-09-2016 AMK01_RS01565 2084d8bcbf4afd9c54c21ac1366ed7da 526 PANTHER PTHR30008:SF0 8 373 2.2E-140 T 14-09-2016 AMK01_RS01565 2084d8bcbf4afd9c54c21ac1366ed7da 526 PANTHER PTHR30008:SF0 421 512 2.2E-140 T 14-09-2016 AMK01_RS01565 2084d8bcbf4afd9c54c21ac1366ed7da 526 Pfam PF02601 Exonuclease VII, large subunit 133 496 1.5E-93 T 14-09-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMK01_RS01565 2084d8bcbf4afd9c54c21ac1366ed7da 526 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 500 26.829 T 14-09-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMK01_RS01565 2084d8bcbf4afd9c54c21ac1366ed7da 526 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 17 358 9.9E-118 T 14-09-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMK01_RS01565 2084d8bcbf4afd9c54c21ac1366ed7da 526 PANTHER PTHR30008 8 373 2.2E-140 T 14-09-2016 AMK01_RS01565 2084d8bcbf4afd9c54c21ac1366ed7da 526 PANTHER PTHR30008 421 512 2.2E-140 T 14-09-2016 AMK01_RS01565 2084d8bcbf4afd9c54c21ac1366ed7da 526 Pfam PF13742 OB-fold nucleic acid binding domain 16 109 2.8E-27 T 14-09-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AMK01_RS03485 f0206bab997a285f76f46028c90d7bef 130 PANTHER PTHR30435 1 124 1.7E-12 T 14-09-2016 AMK01_RS03485 f0206bab997a285f76f46028c90d7bef 130 PANTHER PTHR30435:SF12 1 124 1.7E-12 T 14-09-2016 AMK01_RS01205 e075b2415277ef1ab15f3c3562f84979 328 Pfam PF00482 Type II secretion system (T2SS), protein F 189 317 3.7E-21 T 14-09-2016 IPR018076 Type II secretion system F domain AMK01_RS01205 e075b2415277ef1ab15f3c3562f84979 328 PANTHER PTHR35007:SF2 15 324 2.4E-69 T 14-09-2016 AMK01_RS01205 e075b2415277ef1ab15f3c3562f84979 328 PANTHER PTHR35007 15 324 2.4E-69 T 14-09-2016 AMK01_RS15245 bc69349b3fb3c43661e465eca413a2cb 340 Gene3D G3DSA:3.40.50.720 8 251 7.3E-30 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15245 bc69349b3fb3c43661e465eca413a2cb 340 SUPERFAMILY SSF51735 8 313 5.56E-41 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15245 bc69349b3fb3c43661e465eca413a2cb 340 Pfam PF13460 NAD(P)H-binding 13 163 3.7E-13 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15245 bc69349b3fb3c43661e465eca413a2cb 340 PANTHER PTHR10366 8 311 7.8E-21 T 14-09-2016 AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 SUPERFAMILY SSF46785 11 91 7.7E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 4.3E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 4.3E-8 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 SUPERFAMILY SSF48008 100 230 2.2E-22 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 78 2.1E-16 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 SMART SM00345 19 78 4.6E-17 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 Pfam PF07729 FCD domain 103 224 1.6E-21 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 PANTHER PTHR11751 21 85 1.9E-20 T 14-09-2016 AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 PANTHER PTHR11751 101 119 1.9E-20 T 14-09-2016 AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 SMART SM00895 103 225 1.2E-15 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 Gene3D G3DSA:1.20.120.530 99 230 2.3E-23 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS03240 cbbcce0306e9ccba87226ce8921348bd 243 Gene3D G3DSA:1.10.10.10 15 82 4.3E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03505 59e5138a37e3b3af0d82f21165f81127 160 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 33 157 2.2E-33 T 14-09-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMK01_RS03505 59e5138a37e3b3af0d82f21165f81127 160 PANTHER PTHR36307 23 158 9.3E-21 T 14-09-2016 AMK01_RS03505 59e5138a37e3b3af0d82f21165f81127 160 SMART SM00858 34 96 0.0054 T 14-09-2016 IPR013974 SAF domain AMK01_RS03505 59e5138a37e3b3af0d82f21165f81127 160 Pfam PF13144 Chaperone for flagella basal body P-ring formation 34 157 1.8E-23 T 14-09-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AMK01_RS02350 b04fdfff7d1f839f234360751d5aefd4 239 Pfam PF10099 Anti-sigma-K factor rskA 67 234 1.0E-22 T 14-09-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AMK01_RS02470 a8409596649fa996fcc7e61389dd7af2 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 9.6E-12 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02470 a8409596649fa996fcc7e61389dd7af2 193 PANTHER PTHR30055:SF79 1 183 1.2E-27 T 14-09-2016 AMK01_RS02470 a8409596649fa996fcc7e61389dd7af2 193 Gene3D G3DSA:1.10.357.10 57 181 3.1E-9 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS02470 a8409596649fa996fcc7e61389dd7af2 193 SUPERFAMILY SSF48498 79 188 6.23E-9 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS02470 a8409596649fa996fcc7e61389dd7af2 193 Gene3D G3DSA:1.10.10.60 2 56 5.4E-20 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02470 a8409596649fa996fcc7e61389dd7af2 193 PANTHER PTHR30055 1 183 1.2E-27 T 14-09-2016 AMK01_RS02470 a8409596649fa996fcc7e61389dd7af2 193 SUPERFAMILY SSF46689 3 79 2.57E-15 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02480 80de5268668c34c711c7133b70df0669 144 Gene3D G3DSA:2.60.120.10 18 134 2.7E-18 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS02480 80de5268668c34c711c7133b70df0669 144 Pfam PF07883 Cupin domain 52 121 9.0E-10 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS02480 80de5268668c34c711c7133b70df0669 144 SUPERFAMILY SSF51182 27 143 3.34E-18 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS20260 8f66f25a74861e631078f89d37d5657b 246 PANTHER PTHR36057:SF1 10 246 3.7E-35 T 14-09-2016 AMK01_RS20260 8f66f25a74861e631078f89d37d5657b 246 SUPERFAMILY SSF52833 23 240 1.51E-69 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20260 8f66f25a74861e631078f89d37d5657b 246 PANTHER PTHR36057 10 246 3.7E-35 T 14-09-2016 AMK01_RS20260 8f66f25a74861e631078f89d37d5657b 246 Pfam PF06764 Protein of unknown function (DUF1223) 29 223 5.2E-61 T 14-09-2016 IPR010634 Protein of unknown function DUF1223 AMK01_RS05255 372ba9b434ff1dfe31581dffc5c271dc 131 Pfam PF13564 DoxX-like family 9 107 2.3E-12 T 14-09-2016 IPR032808 DoxX family AMK01_RS20475 5ce43dba8fa2283f8c5d953b5392c3b1 309 SUPERFAMILY SSF53822 22 306 4.02E-85 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS20475 5ce43dba8fa2283f8c5d953b5392c3b1 309 Gene3D G3DSA:3.40.50.2300 141 306 2.6E-52 T 14-09-2016 AMK01_RS20475 5ce43dba8fa2283f8c5d953b5392c3b1 309 Pfam PF13407 Periplasmic binding protein domain 23 285 6.8E-59 T 14-09-2016 IPR025997 Periplasmic binding protein AMK01_RS20475 5ce43dba8fa2283f8c5d953b5392c3b1 309 PANTHER PTHR30036 5 306 1.6E-50 T 14-09-2016 AMK01_RS20475 5ce43dba8fa2283f8c5d953b5392c3b1 309 Gene3D G3DSA:3.40.50.2300 22 140 4.4E-31 T 14-09-2016 AMK01_RS06760 8c0efe109d03751f74af40b4ed794a7c 119 PANTHER PTHR35174 2 119 1.3E-25 T 14-09-2016 AMK01_RS06760 8c0efe109d03751f74af40b4ed794a7c 119 Pfam PF03795 YCII-related domain 17 112 3.7E-15 T 14-09-2016 IPR005545 YCII-related AMK01_RS06760 8c0efe109d03751f74af40b4ed794a7c 119 Gene3D G3DSA:3.30.70.1060 1 117 2.0E-31 T 14-09-2016 AMK01_RS06760 8c0efe109d03751f74af40b4ed794a7c 119 SUPERFAMILY SSF54909 1 114 7.51E-27 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 Gene3D G3DSA:1.10.1060.10 20 134 2.2E-23 T 14-09-2016 AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 PANTHER PTHR10849:SF20 4 163 1.2E-107 T 14-09-2016 AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 Pfam PF12838 4Fe-4S dicluster domain 62 117 5.4E-12 T 14-09-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 147 27.689 T 14-09-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 SUPERFAMILY SSF54862 36 146 4.02E-27 T 14-09-2016 AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 PANTHER PTHR10849 4 163 1.2E-107 T 14-09-2016 AMK01_RS08140 11e3aec91bac31c43007d2e4a09ec443 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 1.7E-47 T 14-09-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 AMK01_RS06125 fada0d5e8209a88af270b62c3fd37700 154 Gene3D G3DSA:2.60.120.10 33 138 5.1E-22 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS06125 fada0d5e8209a88af270b62c3fd37700 154 SUPERFAMILY SSF51182 24 121 3.91E-19 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS06125 fada0d5e8209a88af270b62c3fd37700 154 Pfam PF07883 Cupin domain 41 110 3.9E-13 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 Gene3D G3DSA:3.40.640.10 45 254 2.0E-60 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 Gene3D G3DSA:3.90.1150.10 255 384 7.2E-31 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 SUPERFAMILY SSF53383 7 384 1.02E-94 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 PANTHER PTHR11751:SF401 6 385 1.1E-156 T 14-09-2016 AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 164 188 5.6E-12 T 14-09-2016 AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 92 112 5.6E-12 T 14-09-2016 AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 5.6E-12 T 14-09-2016 AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 200 223 5.6E-12 T 14-09-2016 AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 Pfam PF00155 Aminotransferase class I and II 32 380 4.3E-54 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS09480 739b103c6fa9f258dd859f7481fc4737 385 PANTHER PTHR11751 6 385 1.1E-156 T 14-09-2016 AMK01_RS14210 804c0a618e684e0f90f8634ba4d32883 250 Gene3D G3DSA:3.20.20.70 2 248 2.2E-81 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS14210 804c0a618e684e0f90f8634ba4d32883 250 PANTHER PTHR30456 1 240 2.7E-83 T 14-09-2016 AMK01_RS14210 804c0a618e684e0f90f8634ba4d32883 250 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 242 1.4E-57 T 14-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AMK01_RS14210 804c0a618e684e0f90f8634ba4d32883 250 PANTHER PTHR30456:SF0 1 240 2.7E-83 T 14-09-2016 AMK01_RS14210 804c0a618e684e0f90f8634ba4d32883 250 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 245 8.9E-78 T 14-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AMK01_RS14210 804c0a618e684e0f90f8634ba4d32883 250 SUPERFAMILY SSF63892 3 247 2.35E-76 T 14-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AMK01_RS14210 804c0a618e684e0f90f8634ba4d32883 250 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 250 84.361 T 14-09-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 AMK01_RS00800 e3519a15a97abf81b4e61fa8113a7db8 231 Pfam PF08279 HTH domain 8 61 1.5E-14 T 14-09-2016 IPR013196 Helix-turn-helix, type 11 AMK01_RS00800 e3519a15a97abf81b4e61fa8113a7db8 231 Gene3D G3DSA:1.10.10.10 4 65 6.4E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS00800 e3519a15a97abf81b4e61fa8113a7db8 231 PANTHER PTHR34580:SF3 1 223 9.6E-35 T 14-09-2016 AMK01_RS00800 e3519a15a97abf81b4e61fa8113a7db8 231 Pfam PF13280 WYL domain 139 225 2.0E-10 T 14-09-2016 IPR026881 WYL domain AMK01_RS00800 e3519a15a97abf81b4e61fa8113a7db8 231 PANTHER PTHR34580 1 223 9.6E-35 T 14-09-2016 AMK01_RS00800 e3519a15a97abf81b4e61fa8113a7db8 231 SUPERFAMILY SSF46785 3 64 2.57E-10 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05765 8403041fc65e800c58a641e5409881af 306 PANTHER PTHR30537 1 299 3.5E-90 T 14-09-2016 AMK01_RS05765 8403041fc65e800c58a641e5409881af 306 Gene3D G3DSA:1.10.10.10 7 92 1.4E-24 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05765 8403041fc65e800c58a641e5409881af 306 Pfam PF03466 LysR substrate binding domain 92 296 1.1E-33 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS05765 8403041fc65e800c58a641e5409881af 306 SUPERFAMILY SSF53850 94 300 5.97E-38 T 14-09-2016 AMK01_RS05765 8403041fc65e800c58a641e5409881af 306 SUPERFAMILY SSF46785 7 91 2.24E-21 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05765 8403041fc65e800c58a641e5409881af 306 Gene3D G3DSA:3.40.190.10 97 194 1.5E-21 T 14-09-2016 AMK01_RS05765 8403041fc65e800c58a641e5409881af 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.3E-18 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS18205 51426f20e0cb8f8b0bb51cc4df423365 254 PANTHER PTHR30269 3 254 3.6E-20 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS18205 51426f20e0cb8f8b0bb51cc4df423365 254 Pfam PF01925 Sulfite exporter TauE/SafE 13 245 1.6E-29 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 SMART SM00347 45 144 8.1E-8 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 Gene3D G3DSA:1.10.10.10 33 159 2.6E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 SUPERFAMILY SSF46785 29 158 6.36E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 Pfam PF12802 MarR family 51 108 3.2E-11 T 14-09-2016 AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 PANTHER PTHR18964 42 159 1.2E-12 T 14-09-2016 AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 120 8.6E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 100 8.6E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 84 8.6E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS02975 fbe1b4fb884a7217fa31da8eb3d93ef8 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 134 154 8.6E-9 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS07440 1fd3b505f28ed216200e17dfe294fa7b 362 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 357 2.3E-50 T 14-09-2016 IPR005495 Permease LptG/LptF-related GO:0016021 AMK01_RS07440 1fd3b505f28ed216200e17dfe294fa7b 362 PANTHER PTHR33529:SF1 1 361 6.6E-41 T 14-09-2016 AMK01_RS07440 1fd3b505f28ed216200e17dfe294fa7b 362 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 359 1.6E-78 T 14-09-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AMK01_RS07440 1fd3b505f28ed216200e17dfe294fa7b 362 PANTHER PTHR33529 1 361 6.6E-41 T 14-09-2016 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 PRINTS PR01009 Flagellar M-ring protein signature 193 211 2.3E-36 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 PRINTS PR01009 Flagellar M-ring protein signature 120 138 2.3E-36 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 PRINTS PR01009 Flagellar M-ring protein signature 152 166 2.3E-36 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 PRINTS PR01009 Flagellar M-ring protein signature 339 363 2.3E-36 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 PRINTS PR01009 Flagellar M-ring protein signature 262 280 2.3E-36 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 PANTHER PTHR30046:SF0 1 561 7.0E-116 T 14-09-2016 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 PANTHER PTHR30046 1 561 7.0E-116 T 14-09-2016 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 Pfam PF08345 Flagellar M-ring protein C-terminal 249 415 5.0E-35 T 14-09-2016 IPR013556 Flagellar M-ring C-terminal AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 5 458 1.8E-68 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 Pfam PF01514 Secretory protein of YscJ/FliF family 29 217 9.2E-58 T 14-09-2016 IPR006182 Secretory protein YscJ/FliF AMK01_RS03425 95a9f8f887c8d4fdc6ac793ee61a24d0 561 PIRSF PIRSF004862 1 561 3.5E-124 T 14-09-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 Gene3D G3DSA:3.40.190.10 180 262 4.2E-13 T 14-09-2016 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 Pfam PF03466 LysR substrate binding domain 86 288 6.7E-31 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.2E-18 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 5.3E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 5.3E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 5.3E-8 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 SUPERFAMILY SSF53850 87 290 8.47E-34 T 14-09-2016 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 Gene3D G3DSA:3.40.190.10 87 179 4.9E-16 T 14-09-2016 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 Gene3D G3DSA:1.10.10.10 2 84 2.3E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 PANTHER PTHR30419 1 295 1.5E-89 T 14-09-2016 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 PANTHER PTHR30419:SF4 1 295 1.5E-89 T 14-09-2016 AMK01_RS19845 51894552d20da25da6a24b785f5dbcf0 297 SUPERFAMILY SSF46785 3 103 1.34E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS11995 3fc702fb611af1088bfae18776581190 249 Gene3D G3DSA:3.30.930.10 30 240 2.2E-22 T 14-09-2016 AMK01_RS11995 3fc702fb611af1088bfae18776581190 249 SUPERFAMILY SSF55681 30 241 2.3E-20 T 14-09-2016 AMK01_RS11995 3fc702fb611af1088bfae18776581190 249 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 78 240 3.1E-10 T 14-09-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK01_RS13850 f77e88c4691c641dd9296bf23e0467ef 231 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 30 229 1.5E-47 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS13850 f77e88c4691c641dd9296bf23e0467ef 231 PANTHER PTHR11820:SF7 27 230 3.7E-82 T 14-09-2016 AMK01_RS13850 f77e88c4691c641dd9296bf23e0467ef 231 SUPERFAMILY SSF56529 24 231 5.89E-67 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS13850 f77e88c4691c641dd9296bf23e0467ef 231 Gene3D G3DSA:3.90.850.10 25 231 3.9E-74 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS13850 f77e88c4691c641dd9296bf23e0467ef 231 PANTHER PTHR11820 27 230 3.7E-82 T 14-09-2016 AMK01_RS13470 c4a872c82774e22362d2243a436acf80 124 SUPERFAMILY SSF54593 2 120 2.95E-21 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS13470 c4a872c82774e22362d2243a436acf80 124 Gene3D G3DSA:3.10.180.10 1 118 6.2E-31 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS13470 c4a872c82774e22362d2243a436acf80 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 116 6.5E-9 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS13470 c4a872c82774e22362d2243a436acf80 124 PANTHER PTHR35006 1 120 8.7E-38 T 14-09-2016 AMK01_RS17205 c03d56c1cbc842214d0dfbf8ee0dc8f6 282 Pfam PF13508 Acetyltransferase (GNAT) domain 45 119 1.4E-6 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS17205 c03d56c1cbc842214d0dfbf8ee0dc8f6 282 SUPERFAMILY SSF55729 5 262 2.28E-41 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS17205 c03d56c1cbc842214d0dfbf8ee0dc8f6 282 PANTHER PTHR21471 1 282 2.1E-70 T 14-09-2016 AMK01_RS17205 c03d56c1cbc842214d0dfbf8ee0dc8f6 282 Gene3D G3DSA:3.40.630.30 3 121 2.9E-17 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS17205 c03d56c1cbc842214d0dfbf8ee0dc8f6 282 PANTHER PTHR21471:SF52 1 282 2.1E-70 T 14-09-2016 AMK01_RS02695 c72f5d1e9494f0a2208a31894d7278fa 319 PANTHER PTHR32332:SF21 2 317 1.5E-151 T 14-09-2016 AMK01_RS02695 c72f5d1e9494f0a2208a31894d7278fa 319 PANTHER PTHR32332 2 317 1.5E-151 T 14-09-2016 AMK01_RS02695 c72f5d1e9494f0a2208a31894d7278fa 319 Gene3D G3DSA:3.20.20.70 7 303 2.3E-42 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS02695 c72f5d1e9494f0a2208a31894d7278fa 319 Pfam PF03060 Nitronate monooxygenase 91 306 7.3E-19 T 14-09-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMK01_RS02695 c72f5d1e9494f0a2208a31894d7278fa 319 SUPERFAMILY SSF51412 7 294 8.97E-55 T 14-09-2016 AMK01_RS14795 c71b69d88e7974afb6333b64c61a1ada 466 Pfam PF03734 L,D-transpeptidase catalytic domain 333 461 2.2E-18 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS14795 c71b69d88e7974afb6333b64c61a1ada 466 SUPERFAMILY SSF141523 333 463 3.27E-29 T 14-09-2016 AMK01_RS14795 c71b69d88e7974afb6333b64c61a1ada 466 PANTHER PTHR30582 166 466 2.4E-67 T 14-09-2016 AMK01_RS14795 c71b69d88e7974afb6333b64c61a1ada 466 Gene3D G3DSA:2.40.440.10 331 464 4.2E-31 T 14-09-2016 AMK01_RS14795 c71b69d88e7974afb6333b64c61a1ada 466 PANTHER PTHR30582:SF1 166 466 2.4E-67 T 14-09-2016 AMK01_RS14455 e1a313457f75949c3ab1002908ecf620 424 PANTHER PTHR30510 1 422 2.9E-145 T 14-09-2016 AMK01_RS14455 e1a313457f75949c3ab1002908ecf620 424 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 418 36.312 T 14-09-2016 IPR006698 Uncharacterised protein family UPF0229 AMK01_RS14455 e1a313457f75949c3ab1002908ecf620 424 Pfam PF04285 Protein of unknown function (DUF444) 2 415 3.4E-154 T 14-09-2016 IPR006698 Uncharacterised protein family UPF0229 AMK01_RS14765 1c8d3d3184b7a1ca54cb1480cbfec10a 318 SUPERFAMILY SSF103481 52 152 5.1E-15 T 14-09-2016 AMK01_RS14765 1c8d3d3184b7a1ca54cb1480cbfec10a 318 SUPERFAMILY SSF103481 218 301 3.01E-11 T 14-09-2016 AMK01_RS14765 1c8d3d3184b7a1ca54cb1480cbfec10a 318 PANTHER PTHR22911 18 302 1.4E-51 T 14-09-2016 AMK01_RS14765 1c8d3d3184b7a1ca54cb1480cbfec10a 318 Pfam PF00892 EamA-like transporter family 160 297 1.3E-9 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS14765 1c8d3d3184b7a1ca54cb1480cbfec10a 318 Pfam PF00892 EamA-like transporter family 17 149 3.8E-15 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS13310 02d9bf42593835602e86248f568cd579 133 Gene3D G3DSA:3.90.1590.10 1 81 4.5E-11 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS13310 02d9bf42593835602e86248f568cd579 133 SUPERFAMILY SSF51316 1 123 2.2E-16 T 14-09-2016 IPR011057 Mss4-like AMK01_RS13310 02d9bf42593835602e86248f568cd579 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 80 1.1E-4 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS16805 febcc43bc746c2953ac5d5da8e08f666 187 PANTHER PTHR30055 1 183 7.8E-20 T 14-09-2016 AMK01_RS16805 febcc43bc746c2953ac5d5da8e08f666 187 Gene3D G3DSA:1.10.357.10 15 184 2.6E-26 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS16805 febcc43bc746c2953ac5d5da8e08f666 187 SUPERFAMILY SSF48498 95 185 4.27E-18 T 14-09-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK01_RS16805 febcc43bc746c2953ac5d5da8e08f666 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 1.0E-12 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS16805 febcc43bc746c2953ac5d5da8e08f666 187 PANTHER PTHR30055:SF71 1 183 7.8E-20 T 14-09-2016 AMK01_RS16805 febcc43bc746c2953ac5d5da8e08f666 187 SUPERFAMILY SSF46689 7 80 6.16E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS16805 febcc43bc746c2953ac5d5da8e08f666 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.4E-5 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS16805 febcc43bc746c2953ac5d5da8e08f666 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.4E-5 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 Gene3D G3DSA:1.10.10.60 241 289 1.9E-12 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 SMART SM00342 203 286 1.9E-19 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 PANTHER PTHR11019 5 294 1.0E-48 T 14-09-2016 AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 Pfam PF12833 Helix-turn-helix domain 209 286 3.1E-19 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 Pfam PF02311 AraC-like ligand binding domain 30 89 1.6E-5 T 14-09-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 SUPERFAMILY SSF51182 37 149 3.2E-9 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 PANTHER PTHR11019:SF45 5 294 1.0E-48 T 14-09-2016 AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 Gene3D G3DSA:1.10.10.60 182 236 2.0E-5 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 Gene3D G3DSA:2.60.120.10 12 87 5.6E-7 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS17770 52cca14db01f421fa1ce8a9a24f08b7c 296 SUPERFAMILY SSF46689 241 288 4.35E-9 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 Gene3D G3DSA:1.10.10.10 3 55 8.5E-26 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 PANTHER PTHR30154:SF28 1 156 9.9E-58 T 14-09-2016 AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 SUPERFAMILY SSF46785 4 63 6.19E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-09-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.5E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.5E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.5E-16 T 14-09-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.4E-20 T 14-09-2016 AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 PANTHER PTHR30154 1 156 9.9E-58 T 14-09-2016 AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 Gene3D G3DSA:3.30.70.920 57 141 5.0E-25 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 5.4E-18 T 14-09-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 SMART SM00344 4 113 2.2E-43 T 14-09-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMK01_RS06695 847892713ac7e471acabe1599985ea69 157 SUPERFAMILY SSF54909 64 151 1.47E-17 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS17905 8808e0eb1c388dd85d487eaaebf45243 306 SUPERFAMILY SSF51735 1 277 1.14E-42 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17905 8808e0eb1c388dd85d487eaaebf45243 306 PANTHER PTHR10366 2 275 8.1E-33 T 14-09-2016 AMK01_RS17905 8808e0eb1c388dd85d487eaaebf45243 306 Gene3D G3DSA:3.40.50.720 1 281 8.2E-34 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS17905 8808e0eb1c388dd85d487eaaebf45243 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 229 8.3E-25 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS18490 df5a1212c97ec1c8bbd07ab55b1daed4 314 Gene3D G3DSA:3.40.190.10 115 221 9.6E-8 T 14-09-2016 AMK01_RS18490 df5a1212c97ec1c8bbd07ab55b1daed4 314 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 39 311 1.8E-31 T 14-09-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK01_RS18490 df5a1212c97ec1c8bbd07ab55b1daed4 314 PIRSF PIRSF017082 4 314 9.7E-106 T 14-09-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK01_RS18490 df5a1212c97ec1c8bbd07ab55b1daed4 314 PANTHER PTHR30349:SF25 6 277 5.4E-105 T 14-09-2016 AMK01_RS18490 df5a1212c97ec1c8bbd07ab55b1daed4 314 SUPERFAMILY SSF53850 29 269 1.19E-12 T 14-09-2016 AMK01_RS18490 df5a1212c97ec1c8bbd07ab55b1daed4 314 PANTHER PTHR30349 6 277 5.4E-105 T 14-09-2016 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 Gene3D G3DSA:3.40.50.2300 23 222 3.3E-68 T 14-09-2016 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 PANTHER PTHR30483:SF20 1 367 1.9E-95 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 Pfam PF13458 Periplasmic binding protein 24 362 8.9E-66 T 14-09-2016 IPR028081 Leucine-binding protein domain AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 SUPERFAMILY SSF53822 23 364 3.36E-91 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 275 288 1.8E-22 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 24 40 1.8E-22 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 96 1.8E-22 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 65 83 1.8E-22 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 46 62 1.8E-22 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 252 270 1.8E-22 T 14-09-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK01_RS15745 c69490c48c84cda162d91ff1993994f5 367 PANTHER PTHR30483 1 367 1.9E-95 T 14-09-2016 AMK01_RS08150 abbdfb1460d520304d8e2dad58b65af1 102 PANTHER PTHR11434 5 102 1.8E-43 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK01_RS08150 abbdfb1460d520304d8e2dad58b65af1 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 3.7E-25 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK01_RS08150 abbdfb1460d520304d8e2dad58b65af1 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 20.24 T 14-09-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMK01_RS10985 d341bb45b6f198a7f239a305ebd9a212 348 PANTHER PTHR11358:SF27 47 337 1.5E-92 T 14-09-2016 AMK01_RS10985 d341bb45b6f198a7f239a305ebd9a212 348 Gene3D G3DSA:3.40.800.10 40 341 3.1E-98 T 14-09-2016 IPR023696 Ureohydrolase domain AMK01_RS10985 d341bb45b6f198a7f239a305ebd9a212 348 ProSitePatterns PS01053 Arginase family signature. 267 288 - T 14-09-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 AMK01_RS10985 d341bb45b6f198a7f239a305ebd9a212 348 TIGRFAM TIGR01230 agmatinase: agmatinase 61 337 1.4E-55 T 14-09-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 AMK01_RS10985 d341bb45b6f198a7f239a305ebd9a212 348 SUPERFAMILY SSF52768 57 339 9.71E-84 T 14-09-2016 AMK01_RS10985 d341bb45b6f198a7f239a305ebd9a212 348 Pfam PF00491 Arginase family 68 336 1.4E-80 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS10985 d341bb45b6f198a7f239a305ebd9a212 348 PIRSF PIRSF036979 43 343 1.7E-92 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS10985 d341bb45b6f198a7f239a305ebd9a212 348 PANTHER PTHR11358 47 337 1.5E-92 T 14-09-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 AMK01_RS02545 ad033c10532ffb0141e07f559361c8a5 392 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 373 3.5E-38 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS02545 ad033c10532ffb0141e07f559361c8a5 392 PANTHER PTHR10799:SF750 96 389 1.1E-25 T 14-09-2016 AMK01_RS02545 ad033c10532ffb0141e07f559361c8a5 392 PANTHER PTHR10799 96 389 1.1E-25 T 14-09-2016 AMK01_RS02545 ad033c10532ffb0141e07f559361c8a5 392 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 220 377 1.5E-41 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS02545 ad033c10532ffb0141e07f559361c8a5 392 SMART SM00267 209 377 7.9E-52 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS02545 ad033c10532ffb0141e07f559361c8a5 392 SUPERFAMILY SSF55073 226 376 1.1E-43 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS02545 ad033c10532ffb0141e07f559361c8a5 392 Gene3D G3DSA:3.30.70.270 223 377 3.7E-49 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PANTHER PTHR22912:SF93 1 457 2.1E-195 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.8E-25 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-25 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.8E-25 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 1.8E-25 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.8E-25 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 2.1E-48 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 Gene3D G3DSA:3.50.50.60 142 334 8.2E-47 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 451 1.2E-26 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 Gene3D G3DSA:3.30.390.30 339 460 9.5E-30 T 14-09-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 SUPERFAMILY SSF55424 344 461 9.28E-31 T 14-09-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 Gene3D G3DSA:3.50.50.60 2 141 2.4E-27 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PIRSF PIRSF000350 1 463 8.7E-73 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.4E-50 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 PANTHER PTHR22912 1 457 2.1E-195 T 14-09-2016 AMK01_RS09330 b5d15e1baea197f2045fba807b46e7ad 468 SUPERFAMILY SSF51905 1 378 2.75E-53 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14890 12a81df157183d11e91c3ed3cd4cc76e 133 PANTHER PTHR36173:SF2 3 129 8.7E-26 T 14-09-2016 AMK01_RS14890 12a81df157183d11e91c3ed3cd4cc76e 133 SUPERFAMILY SSF88723 5 123 6.73E-17 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS14890 12a81df157183d11e91c3ed3cd4cc76e 133 PANTHER PTHR36173 3 129 8.7E-26 T 14-09-2016 AMK01_RS14890 12a81df157183d11e91c3ed3cd4cc76e 133 Pfam PF01850 PIN domain 5 124 7.8E-11 T 14-09-2016 IPR002716 PIN domain AMK01_RS14890 12a81df157183d11e91c3ed3cd4cc76e 133 Gene3D G3DSA:3.40.50.1010 3 124 2.4E-4 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS05525 18b60c77fb6a07eb29dc8f899e76b1ac 176 SUPERFAMILY SSF140804 57 159 1.18E-27 T 14-09-2016 IPR027405 YidB-like AMK01_RS05525 18b60c77fb6a07eb29dc8f899e76b1ac 176 Pfam PF06078 Bacterial protein of unknown function (DUF937) 32 150 7.5E-12 T 14-09-2016 IPR009282 Protein of unknown function DUF937 AMK01_RS05525 18b60c77fb6a07eb29dc8f899e76b1ac 176 Gene3D G3DSA:1.10.10.690 45 162 6.8E-33 T 14-09-2016 IPR027405 YidB-like AMK01_RS16945 f5b29a043e256ea0e60e0efd185a7208 375 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 194 356 2.0E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS16945 f5b29a043e256ea0e60e0efd185a7208 375 PANTHER PTHR30151 172 368 6.2E-45 T 14-09-2016 AMK01_RS16945 f5b29a043e256ea0e60e0efd185a7208 375 Gene3D G3DSA:1.10.3720.10 182 359 4.0E-10 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS16945 f5b29a043e256ea0e60e0efd185a7208 375 PANTHER PTHR30151:SF9 172 368 6.2E-45 T 14-09-2016 AMK01_RS16945 f5b29a043e256ea0e60e0efd185a7208 375 SUPERFAMILY SSF161098 183 350 9.59E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17355 9d20d68a724ca8a1235811611825ce75 281 Gene3D G3DSA:1.10.3720.10 2 268 1.3E-56 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17355 9d20d68a724ca8a1235811611825ce75 281 PANTHER PTHR32243 1 281 5.7E-80 T 14-09-2016 AMK01_RS17355 9d20d68a724ca8a1235811611825ce75 281 SUPERFAMILY SSF161098 3 281 2.18E-62 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17355 9d20d68a724ca8a1235811611825ce75 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 273 8.9E-16 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17355 9d20d68a724ca8a1235811611825ce75 281 PANTHER PTHR32243:SF18 1 281 5.7E-80 T 14-09-2016 AMK01_RS11940 539737d1b97a5815a5b0a0873ab6b074 491 Pfam PF04317 YcjX-like family, DUF463 31 490 5.4E-173 T 14-09-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein AMK01_RS11940 539737d1b97a5815a5b0a0873ab6b074 491 PANTHER PTHR38605:SF1 9 491 3.1E-162 T 14-09-2016 AMK01_RS11940 539737d1b97a5815a5b0a0873ab6b074 491 PIRSF PIRSF019381 4 491 9.9E-169 T 14-09-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein AMK01_RS11940 539737d1b97a5815a5b0a0873ab6b074 491 PANTHER PTHR38605 9 491 3.1E-162 T 14-09-2016 AMK01_RS09780 c2107a26bc6985cef08d6ba535ffcb94 281 PANTHER PTHR21057 18 280 1.9E-154 T 14-09-2016 AMK01_RS09780 c2107a26bc6985cef08d6ba535ffcb94 281 Pfam PF00793 DAHP synthetase I family 15 269 9.5E-67 T 14-09-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK01_RS09780 c2107a26bc6985cef08d6ba535ffcb94 281 PANTHER PTHR21057:SF2 18 280 1.9E-154 T 14-09-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK01_RS09780 c2107a26bc6985cef08d6ba535ffcb94 281 SUPERFAMILY SSF51569 16 280 1.28E-103 T 14-09-2016 AMK01_RS09780 c2107a26bc6985cef08d6ba535ffcb94 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 26 280 5.3E-123 T 14-09-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK01_RS09780 c2107a26bc6985cef08d6ba535ffcb94 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 20 281 52.211 T 14-09-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK01_RS09780 c2107a26bc6985cef08d6ba535ffcb94 281 Gene3D G3DSA:3.20.20.70 25 280 8.9E-112 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS07765 d76446bc7250bfcf7bee8fb26a647f89 180 SMART SM00422 12 81 3.6E-6 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS07765 d76446bc7250bfcf7bee8fb26a647f89 180 Pfam PF13411 MerR HTH family regulatory protein 12 79 6.0E-25 T 14-09-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMK01_RS07765 d76446bc7250bfcf7bee8fb26a647f89 180 SUPERFAMILY SSF46955 12 80 2.01E-15 T 14-09-2016 IPR009061 Putative DNA-binding domain AMK01_RS07765 d76446bc7250bfcf7bee8fb26a647f89 180 Gene3D G3DSA:1.10.1660.10 12 90 9.4E-14 T 14-09-2016 AMK01_RS07765 d76446bc7250bfcf7bee8fb26a647f89 180 PANTHER PTHR30204 3 84 2.5E-20 T 14-09-2016 AMK01_RS07765 d76446bc7250bfcf7bee8fb26a647f89 180 PANTHER PTHR30204:SF15 3 84 2.5E-20 T 14-09-2016 AMK01_RS17640 242ab44d8d83e19aa18ee3a6ba865997 275 SUPERFAMILY SSF161098 9 268 2.8E-48 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17640 242ab44d8d83e19aa18ee3a6ba865997 275 PANTHER PTHR30193:SF10 3 275 3.9E-61 T 14-09-2016 AMK01_RS17640 242ab44d8d83e19aa18ee3a6ba865997 275 Gene3D G3DSA:1.10.3720.10 11 273 3.5E-40 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS17640 242ab44d8d83e19aa18ee3a6ba865997 275 PANTHER PTHR30193 3 275 3.9E-61 T 14-09-2016 AMK01_RS17640 242ab44d8d83e19aa18ee3a6ba865997 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 269 1.8E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08580 71ea1f612480c5df4e7914c4db24bd90 130 Pfam PF10990 Protein of unknown function (DUF2809) 37 119 1.3E-23 T 14-09-2016 IPR021257 Protein of unknown function DUF2809 AMK01_RS08950 66be4771c28793a15e4c0d3f2ccf5b18 169 PIRSF PIRSF034110 1 157 1.4E-56 T 14-09-2016 IPR009593 Protein of unknown function DUF1203 AMK01_RS08950 66be4771c28793a15e4c0d3f2ccf5b18 169 Pfam PF06718 Protein of unknown function (DUF1203) 38 156 6.5E-37 T 14-09-2016 IPR009593 Protein of unknown function DUF1203 AMK01_RS13545 f00a1094227baddfc2a49130a62ee655 230 PANTHER PTHR11019 1 63 2.2E-69 T 14-09-2016 AMK01_RS13545 f00a1094227baddfc2a49130a62ee655 230 SUPERFAMILY SSF52317 1 224 7.21E-74 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS13545 f00a1094227baddfc2a49130a62ee655 230 Gene3D G3DSA:3.40.50.880 1 227 4.0E-88 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS13545 f00a1094227baddfc2a49130a62ee655 230 Pfam PF01965 DJ-1/PfpI family 25 220 2.2E-14 T 14-09-2016 IPR002818 DJ-1/PfpI AMK01_RS13545 f00a1094227baddfc2a49130a62ee655 230 PANTHER PTHR11019 84 223 2.2E-69 T 14-09-2016 AMK01_RS13545 f00a1094227baddfc2a49130a62ee655 230 PANTHER PTHR11019:SF97 1 63 2.2E-69 T 14-09-2016 AMK01_RS13545 f00a1094227baddfc2a49130a62ee655 230 PANTHER PTHR11019:SF97 84 223 2.2E-69 T 14-09-2016 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 PANTHER PTHR11575 4 624 2.7E-206 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 Gene3D G3DSA:3.90.780.10 384 618 8.5E-48 T 14-09-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 Gene3D G3DSA:3.60.21.10 36 376 5.8E-86 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 SUPERFAMILY SSF56300 36 381 2.4E-81 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 PRINTS PR01607 Apyrase family signature 555 574 2.2E-27 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 PRINTS PR01607 Apyrase family signature 309 329 2.2E-27 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 PRINTS PR01607 Apyrase family signature 240 257 2.2E-27 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 PRINTS PR01607 Apyrase family signature 268 291 2.2E-27 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 PRINTS PR01607 Apyrase family signature 40 58 2.2E-27 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 PRINTS PR01607 Apyrase family signature 455 478 2.2E-27 T 14-09-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 ProSitePatterns PS00786 5'-nucleotidase signature 2. 128 139 - T 14-09-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 Pfam PF00149 Calcineurin-like phosphoesterase 43 284 1.5E-9 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 PANTHER PTHR11575:SF6 4 624 2.7E-206 T 14-09-2016 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 SUPERFAMILY SSF55816 384 619 1.27E-45 T 14-09-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK01_RS08925 8e80c28abd8805ab0ed5d8dd8832989b 662 Pfam PF02872 5'-nucleotidase, C-terminal domain 384 578 5.4E-27 T 14-09-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK01_RS11935 eb9f6aa92691bfaed3c8ca6ffd0c2d2a 164 SUPERFAMILY SSF53254 10 159 3.21E-26 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS11935 eb9f6aa92691bfaed3c8ca6ffd0c2d2a 164 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 84 8.3E-12 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS11935 eb9f6aa92691bfaed3c8ca6ffd0c2d2a 164 Gene3D G3DSA:3.40.50.1240 7 162 6.0E-50 T 14-09-2016 IPR029033 Histidine phosphatase superfamily AMK01_RS11935 eb9f6aa92691bfaed3c8ca6ffd0c2d2a 164 SMART SM00855 10 135 9.3E-10 T 14-09-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK01_RS09145 b616a0946594a7987529efd266e00d4e 415 SUPERFAMILY SSF56935 22 400 2.15E-51 T 14-09-2016 AMK01_RS09145 b616a0946594a7987529efd266e00d4e 415 PANTHER PTHR35093 46 413 3.5E-14 T 14-09-2016 AMK01_RS09145 b616a0946594a7987529efd266e00d4e 415 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 43 329 7.4E-19 T 14-09-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMK01_RS09145 b616a0946594a7987529efd266e00d4e 415 Gene3D G3DSA:2.40.160.60 45 415 4.5E-62 T 14-09-2016 AMK01_RS19755 553286d1fad67c83560ab04639e8bcfc 287 PANTHER PTHR32243 6 287 4.3E-92 T 14-09-2016 AMK01_RS19755 553286d1fad67c83560ab04639e8bcfc 287 Gene3D G3DSA:1.10.3720.10 5 275 1.0E-63 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19755 553286d1fad67c83560ab04639e8bcfc 287 SUPERFAMILY SSF161098 13 287 3.92E-70 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19755 553286d1fad67c83560ab04639e8bcfc 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 277 3.5E-22 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08785 9c62e409708a69d8aeaf9b1bdc7b8726 330 Pfam PF01471 Putative peptidoglycan binding domain 48 100 1.1E-7 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS08785 9c62e409708a69d8aeaf9b1bdc7b8726 330 Pfam PF03734 L,D-transpeptidase catalytic domain 190 319 1.4E-18 T 14-09-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK01_RS08785 9c62e409708a69d8aeaf9b1bdc7b8726 330 PANTHER PTHR30582:SF1 39 327 5.7E-61 T 14-09-2016 AMK01_RS08785 9c62e409708a69d8aeaf9b1bdc7b8726 330 Gene3D G3DSA:2.40.440.10 186 322 2.2E-28 T 14-09-2016 AMK01_RS08785 9c62e409708a69d8aeaf9b1bdc7b8726 330 SUPERFAMILY SSF47090 41 103 7.06E-11 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS08785 9c62e409708a69d8aeaf9b1bdc7b8726 330 PANTHER PTHR30582 39 327 5.7E-61 T 14-09-2016 AMK01_RS08785 9c62e409708a69d8aeaf9b1bdc7b8726 330 SUPERFAMILY SSF141523 190 320 6.8E-28 T 14-09-2016 AMK01_RS08785 9c62e409708a69d8aeaf9b1bdc7b8726 330 Gene3D G3DSA:1.10.101.10 41 105 1.2E-9 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 Gene3D G3DSA:3.40.50.150 14 269 1.8E-79 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 SUPERFAMILY SSF53335 18 267 9.99E-74 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 PANTHER PTHR13370:SF8 21 287 6.8E-57 T 14-09-2016 AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 246 266 7.3E-41 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 39 53 7.3E-41 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 88 108 7.3E-41 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 204 221 7.3E-41 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 223 241 7.3E-41 T 14-09-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 Pfam PF01555 DNA methylase 40 261 1.1E-58 T 14-09-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 43 49 - T 14-09-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK01_RS05040 99115e58513f250fcee95b3f6a75bdb4 376 PANTHER PTHR13370 21 287 6.8E-57 T 14-09-2016 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 Gene3D G3DSA:3.20.20.70 1 304 6.2E-87 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 PIRSF PIRSF001365 1 305 1.5E-80 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 SMART SM01130 3 302 3.7E-80 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 Pfam PF00701 Dihydrodipicolinate synthetase family 3 300 1.8E-47 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 SUPERFAMILY SSF51569 1 304 9.0E-78 T 14-09-2016 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 14-09-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 7.3E-6 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 7.3E-6 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 7.3E-6 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 7.3E-6 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS03220 fdb592a74c64d445ae8a86eb9d20f7f7 305 PANTHER PTHR12128 3 304 1.0E-64 T 14-09-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK01_RS17260 6e003ee04734ca4af5db3723e037eeb4 407 Gene3D G3DSA:2.40.50.100 97 129 1.1E-13 T 14-09-2016 AMK01_RS17260 6e003ee04734ca4af5db3723e037eeb4 407 Gene3D G3DSA:2.40.50.100 253 287 1.1E-13 T 14-09-2016 AMK01_RS17260 6e003ee04734ca4af5db3723e037eeb4 407 PANTHER PTHR30386:SF7 51 398 1.4E-90 T 14-09-2016 AMK01_RS17260 6e003ee04734ca4af5db3723e037eeb4 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 94 333 2.2E-16 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS17260 6e003ee04734ca4af5db3723e037eeb4 407 PANTHER PTHR30386 51 398 1.4E-90 T 14-09-2016 AMK01_RS17260 6e003ee04734ca4af5db3723e037eeb4 407 SUPERFAMILY SSF56954 133 251 2.22E-5 T 14-09-2016 AMK01_RS17260 6e003ee04734ca4af5db3723e037eeb4 407 SUPERFAMILY SSF111369 95 173 1.57E-8 T 14-09-2016 AMK01_RS06555 17dfe5756b0b9707eb53324ddd4e159b 407 Gene3D G3DSA:1.20.1250.20 18 190 1.7E-11 T 14-09-2016 AMK01_RS06555 17dfe5756b0b9707eb53324ddd4e159b 407 Gene3D G3DSA:1.20.1250.20 213 391 1.2E-13 T 14-09-2016 AMK01_RS06555 17dfe5756b0b9707eb53324ddd4e159b 407 SUPERFAMILY SSF103473 10 392 7.59E-36 T 14-09-2016 IPR020846 Major facilitator superfamily domain AMK01_RS06555 17dfe5756b0b9707eb53324ddd4e159b 407 PANTHER PTHR11360 5 402 9.2E-34 T 14-09-2016 AMK01_RS06555 17dfe5756b0b9707eb53324ddd4e159b 407 Pfam PF07690 Major Facilitator Superfamily 33 274 3.6E-15 T 14-09-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK01_RS06555 17dfe5756b0b9707eb53324ddd4e159b 407 PANTHER PTHR11360:SF126 5 402 9.2E-34 T 14-09-2016 AMK01_RS17880 226f295583cab7f3900f73419743024a 151 PANTHER PTHR30558:SF7 7 151 4.0E-40 T 14-09-2016 AMK01_RS17880 226f295583cab7f3900f73419743024a 151 TIGRFAM TIGR02801 tolR: protein TolR 26 146 1.3E-39 T 14-09-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 AMK01_RS17880 226f295583cab7f3900f73419743024a 151 Pfam PF02472 Biopolymer transport protein ExbD/TolR 26 147 1.8E-31 T 14-09-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AMK01_RS17880 226f295583cab7f3900f73419743024a 151 PANTHER PTHR30558 7 151 4.0E-40 T 14-09-2016 AMK01_RS07900 5b513fefb50a7d16e2b541191bb46491 724 PANTHER PTHR32309:SF13 509 659 1.2E-78 T 14-09-2016 AMK01_RS07900 5b513fefb50a7d16e2b541191bb46491 724 PANTHER PTHR32309:SF13 8 491 1.2E-78 T 14-09-2016 AMK01_RS07900 5b513fefb50a7d16e2b541191bb46491 724 PANTHER PTHR32309 509 659 1.2E-78 T 14-09-2016 AMK01_RS07900 5b513fefb50a7d16e2b541191bb46491 724 Pfam PF02706 Chain length determinant protein 11 184 3.1E-22 T 14-09-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMK01_RS07900 5b513fefb50a7d16e2b541191bb46491 724 SUPERFAMILY SSF52540 560 686 6.64E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS07900 5b513fefb50a7d16e2b541191bb46491 724 PANTHER PTHR32309 8 491 1.2E-78 T 14-09-2016 AMK01_RS07900 5b513fefb50a7d16e2b541191bb46491 724 Gene3D G3DSA:3.40.50.300 561 708 3.6E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS02370 7acacfee1358e21238f90a689c69b611 133 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 11 122 15.012 T 14-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK01_RS02370 7acacfee1358e21238f90a689c69b611 133 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 20 112 8.0E-20 T 14-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK01_RS02370 7acacfee1358e21238f90a689c69b611 133 SUPERFAMILY SSF54211 15 116 7.33E-25 T 14-09-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK01_RS02370 7acacfee1358e21238f90a689c69b611 133 Pfam PF00825 Ribonuclease P 16 113 2.2E-23 T 14-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK01_RS02370 7acacfee1358e21238f90a689c69b611 133 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 16 113 1.2E-17 T 14-09-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK01_RS02370 7acacfee1358e21238f90a689c69b611 133 PANTHER PTHR33992 16 112 1.3E-21 T 14-09-2016 AMK01_RS02370 7acacfee1358e21238f90a689c69b611 133 Gene3D G3DSA:3.30.230.10 16 113 2.4E-27 T 14-09-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK01_RS24245 a62a6cad77bef29666afdaaa82e9e3ec 138 PANTHER PTHR30348:SF7 62 138 9.2E-38 T 14-09-2016 AMK01_RS24245 a62a6cad77bef29666afdaaa82e9e3ec 138 Pfam PF01904 Protein of unknown function DUF72 3 138 1.9E-26 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS24245 a62a6cad77bef29666afdaaa82e9e3ec 138 SUPERFAMILY SSF117396 62 138 4.71E-29 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS24245 a62a6cad77bef29666afdaaa82e9e3ec 138 SUPERFAMILY SSF117396 3 35 4.71E-29 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS24245 a62a6cad77bef29666afdaaa82e9e3ec 138 Gene3D G3DSA:3.20.20.410 3 138 2.6E-32 T 14-09-2016 IPR002763 Protein of unknown function DUF72 AMK01_RS24245 a62a6cad77bef29666afdaaa82e9e3ec 138 PANTHER PTHR30348 62 138 9.2E-38 T 14-09-2016 AMK01_RS24245 a62a6cad77bef29666afdaaa82e9e3ec 138 PANTHER PTHR30348:SF7 1 37 9.2E-38 T 14-09-2016 AMK01_RS24245 a62a6cad77bef29666afdaaa82e9e3ec 138 PANTHER PTHR30348 1 37 9.2E-38 T 14-09-2016 AMK01_RS17840 30eb8303cc094c30a55e6dfd2f5d3522 279 Gene3D G3DSA:2.40.160.20 37 274 1.5E-48 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS17840 30eb8303cc094c30a55e6dfd2f5d3522 279 Pfam PF13505 Outer membrane protein beta-barrel domain 39 256 3.1E-16 T 14-09-2016 IPR027385 Outer membrane protein beta-barrel AMK01_RS17840 30eb8303cc094c30a55e6dfd2f5d3522 279 SUPERFAMILY SSF56925 40 256 8.37E-31 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 PANTHER PTHR13789 3 399 3.1E-115 T 14-09-2016 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 389 4.8E-123 T 14-09-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 SUPERFAMILY SSF51905 2 176 6.48E-58 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 SUPERFAMILY SSF51905 266 383 6.48E-58 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 Gene3D G3DSA:3.50.50.60 267 355 4.1E-43 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 Gene3D G3DSA:3.50.50.60 3 181 4.1E-43 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 Pfam PF01494 FAD binding domain 3 316 7.3E-29 T 14-09-2016 IPR002938 FAD-binding domain GO:0071949 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 4.3E-17 T 14-09-2016 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 4.3E-17 T 14-09-2016 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 4.3E-17 T 14-09-2016 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 4.3E-17 T 14-09-2016 AMK01_RS20420 e3f78e147248f982bd6e264bd137a979 404 PANTHER PTHR13789:SF5 3 399 3.1E-115 T 14-09-2016 AMK01_RS14790 d600be6db82f7f4e000026b39f3a7ef4 279 SUPERFAMILY SSF74650 67 278 2.04E-7 T 14-09-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK01_RS14790 d600be6db82f7f4e000026b39f3a7ef4 279 Pfam PF14486 Domain of unknown function (DUF4432) 194 277 4.0E-14 T 14-09-2016 IPR027839 Protein of unknown function DUF4432 AMK01_RS14790 d600be6db82f7f4e000026b39f3a7ef4 279 Pfam PF14486 Domain of unknown function (DUF4432) 47 167 9.5E-16 T 14-09-2016 IPR027839 Protein of unknown function DUF4432 AMK01_RS03650 a10692a5f0091a5e93ac1999a355f5a7 187 Pfam PF10135 Rod binding protein 93 138 4.5E-10 T 14-09-2016 IPR019301 Flagellar protein FlgJ, N-terminal AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 PANTHER PTHR11739 141 374 2.7E-35 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 PRINTS PR00143 Citrate synthase signature 218 246 1.8E-11 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 PRINTS PR00143 Citrate synthase signature 270 290 1.8E-11 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 PRINTS PR00143 Citrate synthase signature 196 211 1.8E-11 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 PANTHER PTHR11739:SF9 141 374 2.7E-35 T 14-09-2016 AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 SUPERFAMILY SSF48256 32 375 5.5E-61 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 Gene3D G3DSA:1.10.580.10 77 122 5.8E-7 T 14-09-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 Gene3D G3DSA:1.10.580.10 190 292 4.2E-26 T 14-09-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 AMK01_RS11185 fe75e79c02bfc2041742cee0c5b087ff 381 Pfam PF00285 Citrate synthase, C-terminal domain 72 367 1.7E-49 T 14-09-2016 IPR002020 Citrate synthase GO:0046912 AMK01_RS06410 4e2712f6c5ed5f27c41e84fd28f66cb0 176 PANTHER PTHR13256 4 152 3.4E-34 T 14-09-2016 AMK01_RS06410 4e2712f6c5ed5f27c41e84fd28f66cb0 176 Pfam PF13302 Acetyltransferase (GNAT) domain 10 148 7.1E-31 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS06410 4e2712f6c5ed5f27c41e84fd28f66cb0 176 SUPERFAMILY SSF55729 3 154 3.36E-38 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS06410 4e2712f6c5ed5f27c41e84fd28f66cb0 176 Gene3D G3DSA:3.40.630.30 3 170 1.3E-47 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS20060 0c6979843f79bf82ab5915b68ce24116 143 SUPERFAMILY SSF88697 1 141 1.91E-54 T 14-09-2016 IPR015947 PUA-like domain AMK01_RS20060 0c6979843f79bf82ab5915b68ce24116 143 PANTHER PTHR14087 1 137 7.8E-60 T 14-09-2016 AMK01_RS20060 0c6979843f79bf82ab5915b68ce24116 143 Gene3D G3DSA:3.10.590.10 1 134 3.2E-25 T 14-09-2016 IPR002740 EVE domain AMK01_RS20060 0c6979843f79bf82ab5915b68ce24116 143 Pfam PF01878 EVE domain 2 135 6.6E-42 T 14-09-2016 IPR002740 EVE domain AMK01_RS14025 6ba58bcf35458953704d61ef0326017b 83 SUPERFAMILY SSF47598 1 45 5.45E-6 T 14-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK01_RS14200 6fdbcf562986e4d3b47acc35293255b1 138 PANTHER PTHR33204:SF15 12 138 1.6E-43 T 14-09-2016 AMK01_RS14200 6fdbcf562986e4d3b47acc35293255b1 138 Gene3D G3DSA:1.10.10.10 25 135 6.1E-44 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14200 6fdbcf562986e4d3b47acc35293255b1 138 Pfam PF01638 HxlR-like helix-turn-helix 38 124 1.6E-28 T 14-09-2016 IPR002577 Helix-turn-helix, HxlR type AMK01_RS14200 6fdbcf562986e4d3b47acc35293255b1 138 PANTHER PTHR33204 12 138 1.6E-43 T 14-09-2016 AMK01_RS14200 6fdbcf562986e4d3b47acc35293255b1 138 SUPERFAMILY SSF46785 25 134 2.17E-34 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04900 066ed7aaf12bb0714c71cf218e499793 151 Pfam PF00075 RNase H 2 140 4.1E-51 T 14-09-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMK01_RS04900 066ed7aaf12bb0714c71cf218e499793 151 Gene3D G3DSA:3.30.420.10 2 141 2.7E-62 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS04900 066ed7aaf12bb0714c71cf218e499793 151 SUPERFAMILY SSF53098 1 141 8.35E-60 T 14-09-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK01_RS04900 066ed7aaf12bb0714c71cf218e499793 151 PANTHER PTHR10642 3 141 3.0E-60 T 14-09-2016 AMK01_RS04900 066ed7aaf12bb0714c71cf218e499793 151 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 34.966 T 14-09-2016 IPR022892 Ribonuclease H GO:0004523 AMK01_RS00940 4af94398e291bda8fa503df7636827f0 447 PANTHER PTHR30043 232 447 1.5E-65 T 14-09-2016 AMK01_RS00940 4af94398e291bda8fa503df7636827f0 447 SUPERFAMILY SSF161098 244 430 6.15E-32 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00940 4af94398e291bda8fa503df7636827f0 447 PANTHER PTHR30043:SF1 232 447 1.5E-65 T 14-09-2016 AMK01_RS00940 4af94398e291bda8fa503df7636827f0 447 Gene3D G3DSA:1.10.3720.10 243 441 4.6E-30 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00940 4af94398e291bda8fa503df7636827f0 447 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 236 442 1.1E-73 T 14-09-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AMK01_RS00940 4af94398e291bda8fa503df7636827f0 447 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 269 437 5.6E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09630 0ff52ae60561779bfa777bb9372e841a 67 Pfam PF11324 Protein of unknown function (DUF3126) 5 66 2.2E-30 T 14-09-2016 IPR021473 Protein of unknown function DUF3126 AMK01_RS02940 364c74fbdb76e3dfa51ffcc19d057d4d 307 PANTHER PTHR30269 11 296 2.4E-80 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS02940 364c74fbdb76e3dfa51ffcc19d057d4d 307 PANTHER PTHR30269:SF15 11 296 2.4E-80 T 14-09-2016 AMK01_RS02940 364c74fbdb76e3dfa51ffcc19d057d4d 307 Pfam PF01925 Sulfite exporter TauE/SafE 18 287 9.8E-48 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS13540 9b732d2428df3164393c0fb6aa57e829 137 PANTHER PTHR33337 5 136 9.5E-27 T 14-09-2016 AMK01_RS13540 9b732d2428df3164393c0fb6aa57e829 137 SUPERFAMILY SSF51316 4 136 1.67E-39 T 14-09-2016 IPR011057 Mss4-like AMK01_RS13540 9b732d2428df3164393c0fb6aa57e829 137 Gene3D G3DSA:3.90.1590.10 3 136 1.1E-38 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS13540 9b732d2428df3164393c0fb6aa57e829 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 119 7.9E-25 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS11400 7646428f6662cc0596af371ebbe9674f 306 SUPERFAMILY SSF103481 49 147 9.68E-16 T 14-09-2016 AMK01_RS11400 7646428f6662cc0596af371ebbe9674f 306 Pfam PF00892 EamA-like transporter family 156 293 1.6E-7 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS11400 7646428f6662cc0596af371ebbe9674f 306 Pfam PF00892 EamA-like transporter family 11 144 3.6E-13 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS11400 7646428f6662cc0596af371ebbe9674f 306 SUPERFAMILY SSF103481 217 297 1.11E-9 T 14-09-2016 AMK01_RS11400 7646428f6662cc0596af371ebbe9674f 306 PANTHER PTHR22911 6 301 7.7E-49 T 14-09-2016 AMK01_RS16290 3f48a53f58db7618dd85afcce80d5508 465 SUPERFAMILY SSF69572 183 313 1.7E-25 T 14-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK01_RS16290 3f48a53f58db7618dd85afcce80d5508 465 Pfam PF14464 Prokaryotic homologs of the JAB domain 15 111 2.8E-6 T 14-09-2016 IPR028090 JAB domain, prokaryotic AMK01_RS16290 3f48a53f58db7618dd85afcce80d5508 465 Pfam PF00899 ThiF family 180 312 1.7E-21 T 14-09-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK01_RS16290 3f48a53f58db7618dd85afcce80d5508 465 Gene3D G3DSA:3.40.50.720 183 312 2.5E-22 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS00175 95f46e4c820b5ddefe89837e355bb804 149 Gene3D G3DSA:3.40.50.300 6 141 2.4E-27 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00175 95f46e4c820b5ddefe89837e355bb804 149 Pfam PF07475 HPr Serine kinase C-terminal domain 3 84 1.5E-10 T 14-09-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 AMK01_RS00175 95f46e4c820b5ddefe89837e355bb804 149 SUPERFAMILY SSF53795 7 141 2.44E-11 T 14-09-2016 AMK01_RS09190 e5372ef8192c26612762dbfaa4713265 285 PANTHER PTHR33969 18 270 9.5E-54 T 14-09-2016 AMK01_RS09190 e5372ef8192c26612762dbfaa4713265 285 PANTHER PTHR33969:SF2 18 270 9.5E-54 T 14-09-2016 AMK01_RS09190 e5372ef8192c26612762dbfaa4713265 285 Pfam PF02616 Segregation and condensation protein ScpA 51 267 2.3E-11 T 14-09-2016 IPR003768 Segregation and condensation protein A AMK01_RS09050 288715879c48f35452e207677fa177f4 134 Pfam PF04120 Low affinity iron permease 8 130 1.5E-49 T 14-09-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 PANTHER PTHR30307 2 360 4.8E-149 T 14-09-2016 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 SUPERFAMILY SSF111337 1 356 7.19E-128 T 14-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 Gene3D G3DSA:2.40.10.240 65 151 4.1E-18 T 14-09-2016 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 357 43.498 T 14-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 PANTHER PTHR30307:SF0 2 360 4.8E-149 T 14-09-2016 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 Pfam PF02547 Queuosine biosynthesis protein 4 356 1.7E-125 T 14-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 Gene3D G3DSA:3.40.1780.10 194 356 1.8E-95 T 14-09-2016 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 Gene3D G3DSA:3.40.1780.10 1 63 1.8E-95 T 14-09-2016 AMK01_RS10860 8b70b31aa49f249367bde428a1cec26e 360 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 356 7.0E-113 T 14-09-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS14280 acc704624963d83648ca56601990c5bc 222 SUPERFAMILY SSF56209 11 206 7.59E-85 T 14-09-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS14280 acc704624963d83648ca56601990c5bc 222 TIGRFAM TIGR01323 nitrile_alph: nitrile hydratase, alpha subunit 23 208 4.2E-90 T 14-09-2016 IPR018141 Nitrile hydratase, alpha subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS14280 acc704624963d83648ca56601990c5bc 222 Gene3D G3DSA:3.90.330.10 2 208 4.7E-95 T 14-09-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS14280 acc704624963d83648ca56601990c5bc 222 PIRSF PIRSF001426 6 213 3.6E-96 T 14-09-2016 IPR023900 Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS14280 acc704624963d83648ca56601990c5bc 222 Pfam PF02979 Nitrile hydratase, alpha chain 23 205 3.8E-83 T 14-09-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS14280 acc704624963d83648ca56601990c5bc 222 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 26 201 3.0E-84 T 14-09-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS12105 5651ca677103c1ca8d0282369d0e1ef6 176 PANTHER PTHR41386 35 168 2.4E-35 T 14-09-2016 AMK01_RS12105 5651ca677103c1ca8d0282369d0e1ef6 176 Pfam PF06210 Protein of unknown function (DUF1003) 62 152 2.4E-36 T 14-09-2016 IPR010406 Protein of unknown function DUF1003 AMK01_RS12105 5651ca677103c1ca8d0282369d0e1ef6 176 PANTHER PTHR41386:SF1 35 168 2.4E-35 T 14-09-2016 AMK01_RS07105 94326a2b682c9f8e4adcd330c9ed8072 250 Gene3D G3DSA:1.10.10.10 160 238 1.9E-10 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07105 94326a2b682c9f8e4adcd330c9ed8072 250 SUPERFAMILY SSF46785 160 237 1.32E-10 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07105 94326a2b682c9f8e4adcd330c9ed8072 250 Gene3D G3DSA:2.60.120.10 20 150 3.4E-15 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS07105 94326a2b682c9f8e4adcd330c9ed8072 250 SUPERFAMILY SSF51206 17 157 4.71E-27 T 14-09-2016 IPR018490 Cyclic nucleotide-binding-like AMK01_RS07105 94326a2b682c9f8e4adcd330c9ed8072 250 Pfam PF13545 Crp-like helix-turn-helix domain 167 235 2.1E-10 T 14-09-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMK01_RS07105 94326a2b682c9f8e4adcd330c9ed8072 250 Pfam PF00027 Cyclic nucleotide-binding domain 46 130 4.6E-12 T 14-09-2016 IPR000595 Cyclic nucleotide-binding domain AMK01_RS07105 94326a2b682c9f8e4adcd330c9ed8072 250 PANTHER PTHR24567 48 238 1.1E-34 T 14-09-2016 AMK01_RS07105 94326a2b682c9f8e4adcd330c9ed8072 250 PANTHER PTHR24567:SF28 48 238 1.1E-34 T 14-09-2016 AMK01_RS09015 3ceb8bcebb96380cdbb13506899ec114 424 PANTHER PTHR30024:SF7 24 128 1.7E-95 T 14-09-2016 AMK01_RS09015 3ceb8bcebb96380cdbb13506899ec114 424 PANTHER PTHR30024:SF7 154 412 1.7E-95 T 14-09-2016 AMK01_RS09015 3ceb8bcebb96380cdbb13506899ec114 424 PANTHER PTHR30024 24 128 1.7E-95 T 14-09-2016 AMK01_RS09015 3ceb8bcebb96380cdbb13506899ec114 424 PANTHER PTHR30024 154 412 1.7E-95 T 14-09-2016 AMK01_RS09015 3ceb8bcebb96380cdbb13506899ec114 424 Gene3D G3DSA:3.40.190.10 156 260 8.0E-9 T 14-09-2016 AMK01_RS09015 3ceb8bcebb96380cdbb13506899ec114 424 SUPERFAMILY SSF53850 22 271 7.5E-21 T 14-09-2016 AMK01_RS09015 3ceb8bcebb96380cdbb13506899ec114 424 Pfam PF13379 NMT1-like family 22 282 1.7E-72 T 14-09-2016 AMK01_RS08475 3cb808044e9640176768b1b9bb562f40 129 SUPERFAMILY SSF54843 6 122 1.83E-40 T 14-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08475 3cb808044e9640176768b1b9bb562f40 129 Gene3D G3DSA:3.90.470.10 14 123 1.7E-40 T 14-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08475 3cb808044e9640176768b1b9bb562f40 129 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 25.825 T 14-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS08475 3cb808044e9640176768b1b9bb562f40 129 ProSitePatterns PS00464 Ribosomal protein L22 signature. 95 119 - T 14-09-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08475 3cb808044e9640176768b1b9bb562f40 129 PANTHER PTHR13501 3 129 6.5E-43 T 14-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS08475 3cb808044e9640176768b1b9bb562f40 129 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 119 5.7E-33 T 14-09-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK01_RS08475 3cb808044e9640176768b1b9bb562f40 129 Pfam PF00237 Ribosomal protein L22p/L17e 20 119 8.6E-30 T 14-09-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08510 4e5d2d51eebd3bff987d88eb18548a7b 185 PANTHER PTHR11994 3 185 5.7E-98 T 14-09-2016 AMK01_RS08510 4e5d2d51eebd3bff987d88eb18548a7b 185 SUPERFAMILY SSF55282 9 184 9.42E-77 T 14-09-2016 IPR022803 Ribosomal protein L5 domain AMK01_RS08510 4e5d2d51eebd3bff987d88eb18548a7b 185 Pfam PF00281 Ribosomal protein L5 30 86 2.4E-25 T 14-09-2016 IPR031310 Ribosomal protein L5, N-terminal AMK01_RS08510 4e5d2d51eebd3bff987d88eb18548a7b 185 Pfam PF00673 ribosomal L5P family C-terminus 90 183 1.4E-42 T 14-09-2016 IPR031309 Ribosomal protein L5, C-terminal AMK01_RS08510 4e5d2d51eebd3bff987d88eb18548a7b 185 PIRSF PIRSF002161 4 185 1.0E-65 T 14-09-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 AMK01_RS08510 4e5d2d51eebd3bff987d88eb18548a7b 185 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 7 185 41.956 T 14-09-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS08510 4e5d2d51eebd3bff987d88eb18548a7b 185 Gene3D G3DSA:3.30.1440.10 8 184 4.1E-79 T 14-09-2016 IPR022803 Ribosomal protein L5 domain AMK01_RS08510 4e5d2d51eebd3bff987d88eb18548a7b 185 ProSitePatterns PS00358 Ribosomal protein L5 signature. 63 79 - T 14-09-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK01_RS06325 0bc940b515a659b447a681180604923c 388 Pfam PF01594 Domain of unknown function DUF20 56 376 4.8E-33 T 14-09-2016 IPR002549 Transmembrane protein TqsA-like AMK01_RS06325 0bc940b515a659b447a681180604923c 388 PANTHER PTHR21716:SF16 49 383 2.0E-38 T 14-09-2016 AMK01_RS06325 0bc940b515a659b447a681180604923c 388 PANTHER PTHR21716 49 383 2.0E-38 T 14-09-2016 IPR002549 Transmembrane protein TqsA-like AMK01_RS17685 1faaaae886333032e9b6d0107e4c0227 440 Gene3D G3DSA:3.30.465.10 59 173 5.2E-26 T 14-09-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK01_RS17685 1faaaae886333032e9b6d0107e4c0227 440 Pfam PF01565 FAD binding domain 28 143 2.1E-18 T 14-09-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK01_RS17685 1faaaae886333032e9b6d0107e4c0227 440 SUPERFAMILY SSF56176 24 173 8.41E-36 T 14-09-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK01_RS17685 1faaaae886333032e9b6d0107e4c0227 440 PANTHER PTHR13878 21 422 9.7E-47 T 14-09-2016 AMK01_RS17685 1faaaae886333032e9b6d0107e4c0227 440 PANTHER PTHR13878:SF52 21 422 9.7E-47 T 14-09-2016 AMK01_RS02885 a3285ce368a81c78fba43d8a3aac15af 211 PANTHER PTHR33545 6 208 2.4E-48 T 14-09-2016 AMK01_RS02885 a3285ce368a81c78fba43d8a3aac15af 211 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 27 198 2.1E-29 T 14-09-2016 IPR003740 Uncharacterised membrane protein YitT AMK01_RS14375 fface07c7f0731a06c128cf3a4f64a29 171 SUPERFAMILY SSF101738 4 118 6.28E-48 T 14-09-2016 IPR007481 Stringent starvation protein B AMK01_RS14375 fface07c7f0731a06c128cf3a4f64a29 171 Gene3D G3DSA:2.30.30.220 2 118 2.7E-57 T 14-09-2016 IPR007481 Stringent starvation protein B AMK01_RS14375 fface07c7f0731a06c128cf3a4f64a29 171 Pfam PF04386 Stringent starvation protein B 11 158 5.0E-50 T 14-09-2016 IPR007481 Stringent starvation protein B AMK01_RS14735 dae97b5799e250fdc3b02bfb69241252 301 Pfam PF00892 EamA-like transporter family 155 288 7.7E-19 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS14735 dae97b5799e250fdc3b02bfb69241252 301 Pfam PF00892 EamA-like transporter family 8 142 1.1E-20 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS14735 dae97b5799e250fdc3b02bfb69241252 301 PANTHER PTHR12715:SF17 10 296 9.9E-73 T 14-09-2016 AMK01_RS14735 dae97b5799e250fdc3b02bfb69241252 301 SUPERFAMILY SSF103481 42 145 5.62E-14 T 14-09-2016 AMK01_RS14735 dae97b5799e250fdc3b02bfb69241252 301 SUPERFAMILY SSF103481 202 289 6.93E-13 T 14-09-2016 AMK01_RS14735 dae97b5799e250fdc3b02bfb69241252 301 PANTHER PTHR12715 10 296 9.9E-73 T 14-09-2016 AMK01_RS15385 961608832398e6cdd1a16ba0476d7a24 86 Pfam PF04380 Membrane fusogenic activity 5 79 7.2E-28 T 14-09-2016 IPR007475 Membrane fusogenic activity AMK01_RS15650 292975a7416ebd05ed7ce2f97153c7ea 226 Pfam PF09929 Putative PD-(D/E)XK phosphodiesterase (DUF2161) 100 209 4.8E-38 T 14-09-2016 IPR018679 Putative PD-(D/E)XK phosphodiesterase (DUF2161) AMK01_RS10940 3de7f3c53092f858c35dd58536cf78bc 226 Pfam PF08445 FR47-like protein 135 215 2.3E-15 T 14-09-2016 IPR013653 FR47-like GO:0016747 AMK01_RS10940 3de7f3c53092f858c35dd58536cf78bc 226 PANTHER PTHR23091 73 217 3.4E-12 T 14-09-2016 AMK01_RS10940 3de7f3c53092f858c35dd58536cf78bc 226 SUPERFAMILY SSF55729 97 216 2.44E-21 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS10940 3de7f3c53092f858c35dd58536cf78bc 226 Gene3D G3DSA:3.40.630.30 88 222 2.1E-17 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS02095 18bee456ebe4b2ff825d5b057653a75f 220 PANTHER PTHR11735:SF11 1 126 3.7E-35 T 14-09-2016 AMK01_RS02095 18bee456ebe4b2ff825d5b057653a75f 220 SUPERFAMILY SSF53067 3 107 1.86E-27 T 14-09-2016 AMK01_RS02095 18bee456ebe4b2ff825d5b057653a75f 220 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 204 5.2E-49 T 14-09-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 AMK01_RS02095 18bee456ebe4b2ff825d5b057653a75f 220 Pfam PF00814 Glycoprotease family 35 135 7.4E-27 T 14-09-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK01_RS02095 18bee456ebe4b2ff825d5b057653a75f 220 Gene3D G3DSA:3.30.420.40 1 136 6.1E-39 T 14-09-2016 AMK01_RS02095 18bee456ebe4b2ff825d5b057653a75f 220 PANTHER PTHR11735 1 126 3.7E-35 T 14-09-2016 AMK01_RS00195 c93b04824d95e2cb64193bcd95ccde9f 145 SUPERFAMILY SSF110916 20 107 1.96E-9 T 14-09-2016 AMK01_RS00195 c93b04824d95e2cb64193bcd95ccde9f 145 Pfam PF00472 RF-1 domain 9 138 8.2E-24 T 14-09-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK01_RS00195 c93b04824d95e2cb64193bcd95ccde9f 145 Gene3D G3DSA:3.30.160.200 8 111 1.8E-29 T 14-09-2016 AMK01_RS00195 c93b04824d95e2cb64193bcd95ccde9f 145 PANTHER PTHR11075 18 139 5.0E-36 T 14-09-2016 AMK01_RS18675 c4d227d5fb68f96d7c398d9ef0bfbfa3 368 PIRSF PIRSF039026 1 359 1.8E-126 T 14-09-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AMK01_RS18675 c4d227d5fb68f96d7c398d9ef0bfbfa3 368 PANTHER PTHR33376 1 346 5.2E-155 T 14-09-2016 AMK01_RS18675 c4d227d5fb68f96d7c398d9ef0bfbfa3 368 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 323 8.6E-59 T 14-09-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AMK01_RS18675 c4d227d5fb68f96d7c398d9ef0bfbfa3 368 PANTHER PTHR33376:SF5 1 346 5.2E-155 T 14-09-2016 AMK01_RS14130 d41e5777f8949502a579e315d8b95117 452 Gene3D G3DSA:3.40.190.10 43 172 3.9E-7 T 14-09-2016 AMK01_RS14130 d41e5777f8949502a579e315d8b95117 452 Gene3D G3DSA:3.40.190.10 173 369 2.5E-27 T 14-09-2016 AMK01_RS14130 d41e5777f8949502a579e315d8b95117 452 SUPERFAMILY SSF53850 42 438 7.76E-57 T 14-09-2016 AMK01_RS14130 d41e5777f8949502a579e315d8b95117 452 PANTHER PTHR30061 3 451 1.5E-101 T 14-09-2016 AMK01_RS14130 d41e5777f8949502a579e315d8b95117 452 PANTHER PTHR30061:SF7 3 451 1.5E-101 T 14-09-2016 AMK01_RS14130 d41e5777f8949502a579e315d8b95117 452 Pfam PF13416 Bacterial extracellular solute-binding protein 59 371 5.4E-31 T 14-09-2016 AMK01_RS17040 a3fc02f947aa2b3baa602a51b96c0b70 387 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 344 1.4E-39 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS17040 a3fc02f947aa2b3baa602a51b96c0b70 387 PANTHER PTHR30482:SF4 1 92 6.9E-164 T 14-09-2016 IPR017778 ABC transporter, urea, permease protein, UrtC AMK01_RS17040 a3fc02f947aa2b3baa602a51b96c0b70 387 PANTHER PTHR30482 1 92 6.9E-164 T 14-09-2016 AMK01_RS17040 a3fc02f947aa2b3baa602a51b96c0b70 387 PANTHER PTHR30482 120 382 6.9E-164 T 14-09-2016 AMK01_RS17040 a3fc02f947aa2b3baa602a51b96c0b70 387 PANTHER PTHR30482:SF4 120 382 6.9E-164 T 14-09-2016 IPR017778 ABC transporter, urea, permease protein, UrtC AMK01_RS17040 a3fc02f947aa2b3baa602a51b96c0b70 387 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 40 354 1.7E-134 T 14-09-2016 IPR017778 ABC transporter, urea, permease protein, UrtC AMK01_RS14380 c0345b37b89e3f63138453a0968833c5 64 Pfam PF13770 Domain of unknown function (DUF4169) 3 52 7.1E-21 T 14-09-2016 IPR025227 Protein of unknown function DUF4169 AMK01_RS11510 b73b4e922f2460ab75ee516d5f3145bb 130 SUPERFAMILY SSF89360 5 100 7.65E-26 T 14-09-2016 IPR000361 FeS cluster biogenesis AMK01_RS11510 b73b4e922f2460ab75ee516d5f3145bb 130 Gene3D G3DSA:2.60.300.12 5 100 3.1E-31 T 14-09-2016 IPR000361 FeS cluster biogenesis AMK01_RS11510 b73b4e922f2460ab75ee516d5f3145bb 130 PANTHER PTHR10072 4 108 3.6E-39 T 14-09-2016 AMK01_RS11510 b73b4e922f2460ab75ee516d5f3145bb 130 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 4 111 5.7E-48 T 14-09-2016 IPR011298 FeS assembly scaffold SufA GO:0016226 AMK01_RS11510 b73b4e922f2460ab75ee516d5f3145bb 130 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 107 1.3E-16 T 14-09-2016 IPR000361 FeS cluster biogenesis AMK01_RS11510 b73b4e922f2460ab75ee516d5f3145bb 130 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 109 2.8E-32 T 14-09-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AMK01_RS05690 f60c92f34179e87606ab3ceb2c98ca9e 646 Pfam PF04134 Protein of unknown function, DUF393 333 442 2.7E-11 T 14-09-2016 IPR007263 Protein of unknown function DUF393 AMK01_RS13275 b89c8349977275fa8df7f2188c38c23e 217 Gene3D G3DSA:3.40.50.150 56 189 1.5E-39 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS13275 b89c8349977275fa8df7f2188c38c23e 217 Pfam PF13578 Methyltransferase domain 81 184 1.2E-15 T 14-09-2016 AMK01_RS13275 b89c8349977275fa8df7f2188c38c23e 217 PANTHER PTHR10509:SF10 42 216 4.2E-40 T 14-09-2016 AMK01_RS13275 b89c8349977275fa8df7f2188c38c23e 217 PANTHER PTHR10509 42 216 4.2E-40 T 14-09-2016 AMK01_RS13275 b89c8349977275fa8df7f2188c38c23e 217 SUPERFAMILY SSF53335 43 189 1.19E-29 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS17160 4467345009fa71308061d778b0987fca 195 PIRSF PIRSF033924 5 195 1.5E-91 T 14-09-2016 IPR008325 Uncharacterised conserved protein UCP033924 AMK01_RS17160 4467345009fa71308061d778b0987fca 195 Pfam PF06577 Protein of unknown function (DUF1134) 37 195 3.4E-73 T 14-09-2016 IPR008325 Uncharacterised conserved protein UCP033924 AMK01_RS21120 3a4ad20f83e46cec0bbb6eabffdbbc30 318 PANTHER PTHR10120 1 297 1.3E-114 T 14-09-2016 AMK01_RS21120 3a4ad20f83e46cec0bbb6eabffdbbc30 318 PANTHER PTHR10120:SF19 1 297 1.3E-114 T 14-09-2016 AMK01_RS21120 3a4ad20f83e46cec0bbb6eabffdbbc30 318 Gene3D G3DSA:3.30.2010.10 56 146 4.0E-35 T 14-09-2016 AMK01_RS21120 3a4ad20f83e46cec0bbb6eabffdbbc30 318 Hamap MF_00188 Protease HtpX [htpX]. 3 278 29.052 T 14-09-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AMK01_RS21120 3a4ad20f83e46cec0bbb6eabffdbbc30 318 Pfam PF01435 Peptidase family M48 67 278 4.1E-42 T 14-09-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMK01_RS13970 57dae8f71d228d697450c18b5964265c 121 Pfam PF13827 Domain of unknown function (DUF4189) 25 104 2.3E-11 T 14-09-2016 IPR025240 Domain of unknown function DUF4189 AMK01_RS13970 57dae8f71d228d697450c18b5964265c 121 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 23 91 4.0E-5 T 14-09-2016 AMK01_RS15155 6c9496ea7bac066bc80470e5feff14fb 330 SUPERFAMILY SSF51430 1 308 9.95E-89 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS15155 6c9496ea7bac066bc80470e5feff14fb 330 Gene3D G3DSA:3.20.20.100 1 323 6.3E-94 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS15155 6c9496ea7bac066bc80470e5feff14fb 330 PANTHER PTHR11732:SF12 1 329 1.4E-113 T 14-09-2016 AMK01_RS15155 6c9496ea7bac066bc80470e5feff14fb 330 Pfam PF00248 Aldo/keto reductase family 16 306 3.3E-63 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS15155 6c9496ea7bac066bc80470e5feff14fb 330 PANTHER PTHR11732 1 329 1.4E-113 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS18200 53f08134e15b7b681bec519790142bfb 217 Gene3D G3DSA:3.20.20.70 2 193 9.6E-29 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS18200 53f08134e15b7b681bec519790142bfb 217 SUPERFAMILY SSF51391 6 196 3.14E-36 T 14-09-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMK01_RS18200 53f08134e15b7b681bec519790142bfb 217 Pfam PF02581 Thiamine monophosphate synthase/TENI 10 187 1.7E-34 T 14-09-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 AMK01_RS04400 30150ac0f5d059509550297b7ffce240 112 PIRSF PIRSF032126 1 112 3.7E-41 T 14-09-2016 IPR016989 ATP synthase protein I, alphaproteobacterial AMK01_RS04400 30150ac0f5d059509550297b7ffce240 112 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 44 96 1.6E-18 T 14-09-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter AMK01_RS15925 8ab219c991c6ddce6046f28163f88e65 412 Pfam PF06181 Protein of unknown function (DUF989) 6 298 1.3E-130 T 14-09-2016 IPR010389 Domain of unknown function DUF989 AMK01_RS15925 8ab219c991c6ddce6046f28163f88e65 412 Gene3D G3DSA:1.10.760.10 287 410 2.8E-5 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS15925 8ab219c991c6ddce6046f28163f88e65 412 SUPERFAMILY SSF46626 287 404 1.32E-8 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 Pfam PF03466 LysR substrate binding domain 91 294 2.1E-38 T 14-09-2016 IPR005119 LysR, substrate-binding AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 Gene3D G3DSA:1.10.10.10 5 85 2.9E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 Gene3D G3DSA:3.40.190.10 170 264 1.9E-18 T 14-09-2016 AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 SUPERFAMILY SSF53850 94 295 2.53E-41 T 14-09-2016 AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.1E-18 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 Gene3D G3DSA:3.40.190.10 86 169 1.2E-4 T 14-09-2016 AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 PANTHER PTHR30537 1 295 2.2E-122 T 14-09-2016 AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 SUPERFAMILY SSF46785 6 90 2.99E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08635 126c01dc9fa745fe636221db6529cc42 295 PANTHER PTHR30537:SF1 1 295 2.2E-122 T 14-09-2016 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 PANTHER PTHR10909:SF289 42 467 1.9E-164 T 14-09-2016 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 PANTHER PTHR10909 42 467 1.9E-164 T 14-09-2016 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 SUPERFAMILY SSF47203 297 449 3.7E-41 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 Gene3D G3DSA:2.40.110.10 188 280 1.1E-20 T 14-09-2016 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 Gene3D G3DSA:1.20.140.10 281 447 3.6E-41 T 14-09-2016 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 293 446 5.1E-30 T 14-09-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 188 282 1.5E-16 T 14-09-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 SUPERFAMILY SSF56645 55 301 1.34E-32 T 14-09-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK01_RS08295 022b3e267c584e35c58e43a09d357410 552 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 406 425 - T 14-09-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMK01_RS19135 632668d98e07d216b23c42c261f367b3 303 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 33 287 1.1E-59 T 14-09-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region AMK01_RS19135 632668d98e07d216b23c42c261f367b3 303 PANTHER PTHR10907 10 300 6.5E-103 T 14-09-2016 AMK01_RS19135 632668d98e07d216b23c42c261f367b3 303 Gene3D G3DSA:2.120.10.30 26 301 9.4E-75 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS19135 632668d98e07d216b23c42c261f367b3 303 PANTHER PTHR10907:SF47 10 300 6.5E-103 T 14-09-2016 AMK01_RS19135 632668d98e07d216b23c42c261f367b3 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 164 186 4.5E-7 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS19135 632668d98e07d216b23c42c261f367b3 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 230 247 4.5E-7 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS19135 632668d98e07d216b23c42c261f367b3 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 34 51 4.5E-7 T 14-09-2016 IPR005511 Senescence marker protein-30 (SMP-30) AMK01_RS19135 632668d98e07d216b23c42c261f367b3 303 SUPERFAMILY SSF63829 6 301 4.91E-70 T 14-09-2016 AMK01_RS02635 c5c3c45aae1e5b5d840636c60eff0694 324 PANTHER PTHR32196:SF21 14 324 1.2E-86 T 14-09-2016 AMK01_RS02635 c5c3c45aae1e5b5d840636c60eff0694 324 PANTHER PTHR32196 14 324 1.2E-86 T 14-09-2016 AMK01_RS02635 c5c3c45aae1e5b5d840636c60eff0694 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 313 3.6E-45 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS17000 ac0537e3dacc70a61d1d6de3fa2375be 135 Pfam PF07007 Protein of unknown function (DUF1311) 26 126 7.7E-21 T 14-09-2016 IPR009739 Protein of unknown function DUF1311 AMK01_RS11580 697db8a1c5ad7029dc6ec17acb08712c 1132 Pfam PF13116 Protein of unknown function 466 756 8.1E-11 T 14-09-2016 IPR025263 Domain of unknown function DUF3971 AMK01_RS11580 697db8a1c5ad7029dc6ec17acb08712c 1132 Pfam PF13502 AsmA-like C-terminal region 900 1110 8.5E-7 T 14-09-2016 IPR032712 AsmA-like, C-terminal AMK01_RS17450 9024e73f4e932f1a3cb8f64f0962d36c 172 Pfam PF01322 Cytochrome C' 21 114 6.9E-10 T 14-09-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AMK01_RS17450 9024e73f4e932f1a3cb8f64f0962d36c 172 SUPERFAMILY SSF47175 20 119 7.51E-19 T 14-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMK01_RS17450 9024e73f4e932f1a3cb8f64f0962d36c 172 SUPERFAMILY SSF47175 152 172 7.51E-19 T 14-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMK01_RS17450 9024e73f4e932f1a3cb8f64f0962d36c 172 Gene3D G3DSA:1.20.120.10 20 119 2.3E-24 T 14-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMK01_RS17450 9024e73f4e932f1a3cb8f64f0962d36c 172 Gene3D G3DSA:1.20.120.10 152 172 2.3E-24 T 14-09-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AMK01_RS20535 c6c749e6928cd5aff950dc9dff6f3794 117 Gene3D G3DSA:3.10.180.10 14 114 5.1E-31 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS20535 c6c749e6928cd5aff950dc9dff6f3794 117 Pfam PF12681 Glyoxalase-like domain 12 112 1.4E-9 T 14-09-2016 IPR025870 Glyoxalase-like domain AMK01_RS20535 c6c749e6928cd5aff950dc9dff6f3794 117 SUPERFAMILY SSF54593 9 112 3.62E-25 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS01230 62f40cc0ae0a5f26ae75175201ddcf5c 285 Gene3D G3DSA:3.90.1720.10 165 284 1.3E-27 T 14-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS01230 62f40cc0ae0a5f26ae75175201ddcf5c 285 Pfam PF00877 NlpC/P60 family 178 259 1.6E-17 T 14-09-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK01_RS01230 62f40cc0ae0a5f26ae75175201ddcf5c 285 SUPERFAMILY SSF54001 162 284 2.29E-33 T 14-09-2016 AMK01_RS01230 62f40cc0ae0a5f26ae75175201ddcf5c 285 PANTHER PTHR21666 158 263 7.4E-15 T 14-09-2016 AMK01_RS06710 c1de227d4419f9392c4a2598ac9cd84b 314 SMART SM00046 2 131 0.0011 T 14-09-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMK01_RS06710 c1de227d4419f9392c4a2598ac9cd84b 314 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 2.0E-21 T 14-09-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMK01_RS06710 c1de227d4419f9392c4a2598ac9cd84b 314 SUPERFAMILY SSF111331 6 298 2.4E-51 T 14-09-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMK01_RS06710 c1de227d4419f9392c4a2598ac9cd84b 314 Gene3D G3DSA:3.40.50.10330 45 98 2.2E-4 T 14-09-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK01_RS06710 c1de227d4419f9392c4a2598ac9cd84b 314 PANTHER PTHR12358 22 308 1.0E-18 T 14-09-2016 AMK01_RS08990 59ea167720d2b6414c9036e64c75d204 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 183 9.5E-16 T 14-09-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK01_RS08990 59ea167720d2b6414c9036e64c75d204 221 Gene3D G3DSA:3.40.50.1000 68 209 6.5E-40 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS08990 59ea167720d2b6414c9036e64c75d204 221 ProSitePatterns PS01228 Hypothetical cof family signature 1. 11 22 - T 14-09-2016 IPR000150 Cof protein GO:0016787 AMK01_RS08990 59ea167720d2b6414c9036e64c75d204 221 SUPERFAMILY SSF56784 9 204 1.8E-38 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS08990 59ea167720d2b6414c9036e64c75d204 221 Gene3D G3DSA:1.10.150.240 26 61 1.4E-4 T 14-09-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK01_RS08990 59ea167720d2b6414c9036e64c75d204 221 PANTHER PTHR18901 9 204 6.8E-40 T 14-09-2016 AMK01_RS08990 59ea167720d2b6414c9036e64c75d204 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 183 2.3E-15 T 14-09-2016 IPR023214 HAD-like domain AMK01_RS09685 3f1ff930f023a7b24ed470a57d49df45 205 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 10 194 3.0E-22 T 14-09-2016 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein AMK01_RS01570 4df21162e996acd7fa4bea88e8f2aaf5 196 SUPERFAMILY SSF52218 1 196 2.44E-51 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS01570 4df21162e996acd7fa4bea88e8f2aaf5 196 Gene3D G3DSA:3.40.50.360 1 196 2.7E-46 T 14-09-2016 IPR029039 Flavoprotein-like domain AMK01_RS01570 4df21162e996acd7fa4bea88e8f2aaf5 196 Pfam PF02525 Flavodoxin-like fold 1 191 3.5E-37 T 14-09-2016 IPR003680 Flavodoxin-like fold AMK01_RS01570 4df21162e996acd7fa4bea88e8f2aaf5 196 PANTHER PTHR10204 1 196 3.7E-30 T 14-09-2016 AMK01_RS16635 6ac8b51cf6ff52db2f0c06b775903c24 153 Pfam PF08660 Oligosaccharide biosynthesis protein Alg14 like 61 143 2.3E-11 T 14-09-2016 IPR013969 Oligosaccharide biosynthesis protein Alg14-like AMK01_RS16635 6ac8b51cf6ff52db2f0c06b775903c24 153 Gene3D G3DSA:3.40.50.2000 65 136 8.0E-5 T 14-09-2016 AMK01_RS02555 5babf21d5411e512cab05f81c8c5e575 216 PANTHER PTHR30055 18 198 3.3E-16 T 14-09-2016 AMK01_RS02555 5babf21d5411e512cab05f81c8c5e575 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 1.7E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02555 5babf21d5411e512cab05f81c8c5e575 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 1.7E-8 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02555 5babf21d5411e512cab05f81c8c5e575 216 SUPERFAMILY SSF46689 20 101 2.33E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS02555 5babf21d5411e512cab05f81c8c5e575 216 PANTHER PTHR30055:SF92 18 198 3.3E-16 T 14-09-2016 AMK01_RS02555 5babf21d5411e512cab05f81c8c5e575 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 78 7.8E-13 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS02555 5babf21d5411e512cab05f81c8c5e575 216 Gene3D G3DSA:1.10.357.10 22 195 3.1E-24 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS17005 e547ccda8231f54f74da9ee9609f2f2c 101 PANTHER PTHR33569 1 101 6.2E-65 T 14-09-2016 AMK01_RS17005 e547ccda8231f54f74da9ee9609f2f2c 101 Pfam PF00699 Urease beta subunit 3 100 3.1E-46 T 14-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17005 e547ccda8231f54f74da9ee9609f2f2c 101 PANTHER PTHR33569:SF1 1 101 6.2E-65 T 14-09-2016 AMK01_RS17005 e547ccda8231f54f74da9ee9609f2f2c 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.646 T 14-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17005 e547ccda8231f54f74da9ee9609f2f2c 101 Gene3D G3DSA:2.10.150.10 1 101 2.8E-51 T 14-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17005 e547ccda8231f54f74da9ee9609f2f2c 101 SUPERFAMILY SSF51278 1 101 5.62E-48 T 14-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS17005 e547ccda8231f54f74da9ee9609f2f2c 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 100 1.0E-43 T 14-09-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 AMK01_RS06190 2c6ef29e23173ccb22470d212cfc1fcf 217 PANTHER PTHR10108 12 145 1.0E-27 T 14-09-2016 AMK01_RS06190 2c6ef29e23173ccb22470d212cfc1fcf 217 Pfam PF08241 Methyltransferase domain 49 144 9.6E-24 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK01_RS06190 2c6ef29e23173ccb22470d212cfc1fcf 217 Gene3D G3DSA:3.40.50.150 11 189 2.3E-35 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS06190 2c6ef29e23173ccb22470d212cfc1fcf 217 SUPERFAMILY SSF53335 12 202 4.45E-36 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05905 a772549ddaf742ffd683940128466a8a 266 PANTHER PTHR36832 1 266 2.6E-47 T 14-09-2016 AMK01_RS05905 a772549ddaf742ffd683940128466a8a 266 Pfam PF06182 ABC-2 family transporter protein 40 265 2.9E-15 T 14-09-2016 IPR010390 Protein of unknown function DUF990 AMK01_RS07040 f67fc1918ae7a8caeb09ce3eef22e975 300 Pfam PF12697 Alpha/beta hydrolase family 40 281 2.1E-9 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS07040 f67fc1918ae7a8caeb09ce3eef22e975 300 PANTHER PTHR10992 2 296 4.4E-23 T 14-09-2016 AMK01_RS07040 f67fc1918ae7a8caeb09ce3eef22e975 300 SUPERFAMILY SSF53474 8 282 2.42E-37 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS07040 f67fc1918ae7a8caeb09ce3eef22e975 300 Gene3D G3DSA:3.40.50.1820 11 295 4.5E-59 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS18530 886f97d9c2c9dde5b1180033accc92d4 406 Pfam PF00092 von Willebrand factor type A domain 215 388 5.8E-9 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS18530 886f97d9c2c9dde5b1180033accc92d4 406 SUPERFAMILY SSF53300 211 393 9.05E-18 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS18530 886f97d9c2c9dde5b1180033accc92d4 406 SUPERFAMILY SSF53300 134 173 9.05E-18 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS18530 886f97d9c2c9dde5b1180033accc92d4 406 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 19 65 2.1E-9 T 14-09-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMK01_RS18530 886f97d9c2c9dde5b1180033accc92d4 406 Gene3D G3DSA:3.40.50.410 160 173 4.6E-14 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS18530 886f97d9c2c9dde5b1180033accc92d4 406 Gene3D G3DSA:3.40.50.410 211 394 4.6E-14 T 14-09-2016 IPR002035 von Willebrand factor, type A AMK01_RS13760 db7ae93dfbbf6509caefe0fa063daf84 365 Gene3D G3DSA:3.30.70.1230 178 363 3.8E-27 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13760 db7ae93dfbbf6509caefe0fa063daf84 365 PANTHER PTHR11920:SF348 122 353 7.2E-57 T 14-09-2016 AMK01_RS13760 db7ae93dfbbf6509caefe0fa063daf84 365 SMART SM00044 142 352 1.4E-6 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13760 db7ae93dfbbf6509caefe0fa063daf84 365 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 178 355 1.4E-16 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS13760 db7ae93dfbbf6509caefe0fa063daf84 365 PANTHER PTHR11920 122 353 7.2E-57 T 14-09-2016 AMK01_RS13760 db7ae93dfbbf6509caefe0fa063daf84 365 SUPERFAMILY SSF55073 171 363 2.98E-44 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS01235 ef73d35acdf9c82c7d7822e6a5146bdf 463 Pfam PF01425 Amidase 32 441 2.0E-85 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS01235 ef73d35acdf9c82c7d7822e6a5146bdf 463 PANTHER PTHR11895 4 461 1.9E-120 T 14-09-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS01235 ef73d35acdf9c82c7d7822e6a5146bdf 463 PANTHER PTHR11895:SF66 4 461 1.9E-120 T 14-09-2016 AMK01_RS01235 ef73d35acdf9c82c7d7822e6a5146bdf 463 Gene3D G3DSA:3.90.1300.10 4 454 2.5E-114 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS01235 ef73d35acdf9c82c7d7822e6a5146bdf 463 SUPERFAMILY SSF75304 3 458 1.31E-118 T 14-09-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK01_RS21145 029f23573069c2e32c7b3ba3e30d3d81 219 PANTHER PTHR10146 1 219 3.3E-84 T 14-09-2016 IPR011078 Uncharacterised protein family UPF0001 AMK01_RS21145 029f23573069c2e32c7b3ba3e30d3d81 219 Gene3D G3DSA:3.20.20.10 1 219 4.5E-76 T 14-09-2016 IPR029066 PLP-binding barrel AMK01_RS21145 029f23573069c2e32c7b3ba3e30d3d81 219 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 219 5.2E-50 T 14-09-2016 IPR011078 Uncharacterised protein family UPF0001 AMK01_RS21145 029f23573069c2e32c7b3ba3e30d3d81 219 SUPERFAMILY SSF51419 1 217 2.94E-69 T 14-09-2016 IPR029066 PLP-binding barrel AMK01_RS21145 029f23573069c2e32c7b3ba3e30d3d81 219 PIRSF PIRSF004848 1 219 1.6E-60 T 14-09-2016 IPR011078 Uncharacterised protein family UPF0001 AMK01_RS21145 029f23573069c2e32c7b3ba3e30d3d81 219 Pfam PF01168 Alanine racemase, N-terminal domain 17 219 2.7E-21 T 14-09-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK01_RS05265 549515d1503f2688f9e68906d6e1082d 79 Pfam PF06169 Protein of unknown function (DUF982) 8 76 2.9E-13 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS04700 724d2df647b1b56d4efa554906d22351 449 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 1 149 5.5E-67 T 14-09-2016 IPR009827 Dicarboxylate carrier MatC N-terminal AMK01_RS04700 724d2df647b1b56d4efa554906d22351 449 Pfam PF03600 Citrate transporter 274 441 2.5E-10 T 14-09-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AMK01_RS07910 4a54c5335cb5efd4341ff008a2713b03 69 Pfam PF11003 Protein of unknown function (DUF2842) 6 65 2.9E-21 T 14-09-2016 IPR021265 Protein of unknown function DUF2842 AMK01_RS16940 d933f0efdf8a63012a8ede29db47062a 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 303 5.8E-19 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS16940 d933f0efdf8a63012a8ede29db47062a 309 Gene3D G3DSA:1.10.3720.10 86 304 1.2E-9 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS16940 d933f0efdf8a63012a8ede29db47062a 309 PANTHER PTHR30151:SF9 60 151 1.0E-45 T 14-09-2016 AMK01_RS16940 d933f0efdf8a63012a8ede29db47062a 309 PANTHER PTHR30151:SF9 171 304 1.0E-45 T 14-09-2016 AMK01_RS16940 d933f0efdf8a63012a8ede29db47062a 309 PANTHER PTHR30151 171 304 1.0E-45 T 14-09-2016 AMK01_RS16940 d933f0efdf8a63012a8ede29db47062a 309 PANTHER PTHR30151 60 151 1.0E-45 T 14-09-2016 AMK01_RS16940 d933f0efdf8a63012a8ede29db47062a 309 SUPERFAMILY SSF161098 88 286 9.68E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07675 1a711c09ba8eb9465ac201424f1b47d2 171 ProSitePatterns PS01117 MarR-type HTH domain signature. 86 120 - T 14-09-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK01_RS07675 1a711c09ba8eb9465ac201424f1b47d2 171 Gene3D G3DSA:1.10.10.10 16 166 1.4E-27 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07675 1a711c09ba8eb9465ac201424f1b47d2 171 SUPERFAMILY SSF46785 12 164 1.21E-22 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07675 1a711c09ba8eb9465ac201424f1b47d2 171 Pfam PF13463 Winged helix DNA-binding domain 55 120 2.1E-10 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS07675 1a711c09ba8eb9465ac201424f1b47d2 171 SMART SM00347 48 149 1.7E-6 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS13330 11889f280dbfa66559e0fb0b021a7410 168 SUPERFAMILY SSF55729 5 166 4.8E-29 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS13330 11889f280dbfa66559e0fb0b021a7410 168 PANTHER PTHR23091 1 166 3.3E-24 T 14-09-2016 AMK01_RS13330 11889f280dbfa66559e0fb0b021a7410 168 Gene3D G3DSA:3.40.630.30 5 165 8.0E-29 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS13330 11889f280dbfa66559e0fb0b021a7410 168 Pfam PF13673 Acetyltransferase (GNAT) domain 43 145 2.0E-14 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS18780 db296e46461ed90972a2b35b6646bd15 162 Gene3D G3DSA:2.40.320.10 1 149 1.9E-52 T 14-09-2016 IPR023577 CYTH domain AMK01_RS18780 db296e46461ed90972a2b35b6646bd15 162 Pfam PF01928 CYTH domain 3 136 1.3E-15 T 14-09-2016 IPR023577 CYTH domain AMK01_RS18780 db296e46461ed90972a2b35b6646bd15 162 SMART SM01118 2 149 3.2E-20 T 14-09-2016 IPR023577 CYTH domain AMK01_RS18780 db296e46461ed90972a2b35b6646bd15 162 PANTHER PTHR40114 2 158 2.8E-37 T 14-09-2016 AMK01_RS18780 db296e46461ed90972a2b35b6646bd15 162 PIRSF PIRSF016487 1 156 4.1E-63 T 14-09-2016 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like AMK01_RS18780 db296e46461ed90972a2b35b6646bd15 162 SUPERFAMILY SSF55154 1 149 6.7E-39 T 14-09-2016 IPR033469 CYTH-like domain AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 PANTHER PTHR18919 27 323 2.9E-128 T 14-09-2016 AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 Gene3D G3DSA:3.40.47.10 2 161 6.5E-66 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 PANTHER PTHR18919:SF109 27 323 2.9E-128 T 14-09-2016 AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 323 1.1E-119 T 14-09-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 Gene3D G3DSA:3.40.47.10 162 323 4.7E-54 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 323 70.22 T 14-09-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 SUPERFAMILY SSF53901 8 323 5.77E-74 T 14-09-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 190 5.9E-33 T 14-09-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK01_RS07755 eedb0b3d5d73a5046005e95c7b0e1d79 323 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 323 1.9E-35 T 14-09-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK01_RS05150 41699e68e56d87dbaae8819a25479dd6 306 Gene3D G3DSA:3.40.1350.10 157 283 3.5E-11 T 14-09-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 AMK01_RS05150 41699e68e56d87dbaae8819a25479dd6 306 Pfam PF04471 Restriction endonuclease 161 280 1.5E-32 T 14-09-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AMK01_RS05150 41699e68e56d87dbaae8819a25479dd6 306 PANTHER PTHR30015:SF5 2 306 8.7E-97 T 14-09-2016 AMK01_RS05150 41699e68e56d87dbaae8819a25479dd6 306 Pfam PF14338 Mrr N-terminal domain 6 89 8.0E-26 T 14-09-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain AMK01_RS05150 41699e68e56d87dbaae8819a25479dd6 306 PANTHER PTHR30015 2 306 8.7E-97 T 14-09-2016 AMK01_RS05150 41699e68e56d87dbaae8819a25479dd6 306 SUPERFAMILY SSF52980 163 283 2.25E-14 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AMK01_RS11465 d7e6375124c8bfe4f66ebde0ac0eeb35 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 117 3.6E-25 T 14-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMK01_RS11465 d7e6375124c8bfe4f66ebde0ac0eeb35 125 TIGRFAM TIGR00494 crcB: protein CrcB 5 120 2.1E-29 T 14-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMK01_RS11465 d7e6375124c8bfe4f66ebde0ac0eeb35 125 PANTHER PTHR28259 1 125 1.8E-35 T 14-09-2016 AMK01_RS11465 d7e6375124c8bfe4f66ebde0ac0eeb35 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 122 19.923 T 14-09-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMK01_RS06290 42807dadc37ece5bf6f091435ddc6427 500 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 16 469 1.4E-123 T 14-09-2016 IPR003846 Uncharacterised protein family UPF0061 AMK01_RS06290 42807dadc37ece5bf6f091435ddc6427 500 PANTHER PTHR32057 1 500 2.8E-182 T 14-09-2016 AMK01_RS06290 42807dadc37ece5bf6f091435ddc6427 500 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 12 486 46.704 T 14-09-2016 IPR003846 Uncharacterised protein family UPF0061 AMK01_RS11620 9fd25e102c2f45ec55dd78150e23919f 360 SUPERFAMILY SSF53822 25 352 1.27E-44 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS11620 9fd25e102c2f45ec55dd78150e23919f 360 PANTHER PTHR30483 1 244 1.5E-15 T 14-09-2016 AMK01_RS11620 9fd25e102c2f45ec55dd78150e23919f 360 Gene3D G3DSA:3.40.50.2300 141 285 2.3E-16 T 14-09-2016 AMK01_RS11620 9fd25e102c2f45ec55dd78150e23919f 360 Pfam PF13458 Periplasmic binding protein 25 349 1.0E-27 T 14-09-2016 IPR028081 Leucine-binding protein domain AMK01_RS11620 9fd25e102c2f45ec55dd78150e23919f 360 Gene3D G3DSA:3.40.50.2300 24 140 1.2E-11 T 14-09-2016 AMK01_RS11620 9fd25e102c2f45ec55dd78150e23919f 360 Gene3D G3DSA:3.40.50.2300 286 336 1.2E-11 T 14-09-2016 AMK01_RS15060 9fbc4ef849430595fd172c450cf06619 230 SUPERFAMILY SSF56037 49 193 2.2E-28 T 14-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK01_RS15060 9fbc4ef849430595fd172c450cf06619 230 Pfam PF03483 B3/4 domain 61 193 2.1E-20 T 14-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK01_RS15060 9fbc4ef849430595fd172c450cf06619 230 PANTHER PTHR39209:SF2 1 230 1.6E-39 T 14-09-2016 AMK01_RS15060 9fbc4ef849430595fd172c450cf06619 230 SMART SM00873 59 206 5.1E-11 T 14-09-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK01_RS15060 9fbc4ef849430595fd172c450cf06619 230 PANTHER PTHR39209 1 230 1.6E-39 T 14-09-2016 AMK01_RS15060 9fbc4ef849430595fd172c450cf06619 230 Gene3D G3DSA:3.50.40.10 57 195 6.7E-18 T 14-09-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK01_RS15640 209d86b11fa20bcc0246ac36e5a33480 154 PANTHER PTHR34354:SF1 11 147 1.0E-53 T 14-09-2016 AMK01_RS15640 209d86b11fa20bcc0246ac36e5a33480 154 Pfam PF14489 QueF-like protein 58 136 3.1E-33 T 14-09-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS15640 209d86b11fa20bcc0246ac36e5a33480 154 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 154 69.062 T 14-09-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS15640 209d86b11fa20bcc0246ac36e5a33480 154 PANTHER PTHR34354 11 147 1.0E-53 T 14-09-2016 AMK01_RS15640 209d86b11fa20bcc0246ac36e5a33480 154 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 23 134 8.3E-45 T 14-09-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS15640 209d86b11fa20bcc0246ac36e5a33480 154 SUPERFAMILY SSF55620 20 133 3.34E-27 T 14-09-2016 AMK01_RS15640 209d86b11fa20bcc0246ac36e5a33480 154 Gene3D G3DSA:3.30.1130.10 12 140 2.0E-47 T 14-09-2016 AMK01_RS15640 209d86b11fa20bcc0246ac36e5a33480 154 PIRSF PIRSF027377 4 140 1.1E-51 T 14-09-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS06840 f6c1fffd85ba43f2543c062488766e27 76 Pfam PF06568 Domain of unknown function (DUF1127) 32 65 5.0E-9 T 14-09-2016 IPR009506 Protein of unknown function DUF1127 AMK01_RS18750 5f00034be28b41ec80d0b3e1d6d85b51 213 PIRSF PIRSF008159 1 213 5.9E-77 T 14-09-2016 IPR016537 Uncharacterised conserved protein UCP008159, AMK01_RS18750 5f00034be28b41ec80d0b3e1d6d85b51 213 Pfam PF06226 Protein of unknown function (DUF1007) 8 213 1.8E-59 T 14-09-2016 IPR010412 Protein of unknown function DUF1007 AMK01_RS12775 3b5345d15fed9fb08c56e5d81433eaef 51 Pfam PF08085 Entericidin EcnA/B family 22 41 2.0E-6 T 14-09-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AMK01_RS16715 a49079961ddc6836b4fa8f8884bed237 201 Gene3D G3DSA:3.40.50.1820 3 199 2.1E-57 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS16715 a49079961ddc6836b4fa8f8884bed237 201 SUPERFAMILY SSF53474 6 198 1.65E-44 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS16715 a49079961ddc6836b4fa8f8884bed237 201 PANTHER PTHR10655 16 192 2.6E-36 T 14-09-2016 AMK01_RS16715 a49079961ddc6836b4fa8f8884bed237 201 Pfam PF01738 Dienelactone hydrolase family 75 182 4.1E-6 T 14-09-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMK01_RS16715 a49079961ddc6836b4fa8f8884bed237 201 PANTHER PTHR10655:SF23 16 192 2.6E-36 T 14-09-2016 AMK01_RS05700 a2f5ec466a570d743deb27363043bbc2 365 SUPERFAMILY SSF53335 58 219 2.05E-23 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05700 a2f5ec466a570d743deb27363043bbc2 365 Gene3D G3DSA:3.40.50.150 59 214 1.6E-19 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS05700 a2f5ec466a570d743deb27363043bbc2 365 Pfam PF13489 Methyltransferase domain 57 214 3.4E-10 T 14-09-2016 AMK01_RS18935 73a72119e85f88ec8b049fd96131a51a 153 SMART SM00028 69 102 1.6E-6 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18935 73a72119e85f88ec8b049fd96131a51a 153 SUPERFAMILY SSF48452 48 143 1.16E-14 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18935 73a72119e85f88ec8b049fd96131a51a 153 Gene3D G3DSA:1.25.40.10 48 134 2.2E-14 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18935 73a72119e85f88ec8b049fd96131a51a 153 Pfam PF13432 Tetratricopeptide repeat 75 134 2.3E-8 T 14-09-2016 AMK01_RS17310 30929b24ff685d937e9ae4bedf5578c0 178 Gene3D G3DSA:1.20.1290.10 31 169 9.6E-9 T 14-09-2016 IPR029032 AhpD-like AMK01_RS17310 30929b24ff685d937e9ae4bedf5578c0 178 SUPERFAMILY SSF69118 1 169 5.76E-19 T 14-09-2016 IPR029032 AhpD-like AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 Gene3D G3DSA:3.50.50.60 5 55 3.5E-18 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 Gene3D G3DSA:3.50.50.60 340 374 3.5E-18 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 Gene3D G3DSA:3.50.50.60 158 220 3.5E-18 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 SUPERFAMILY SSF54373 225 337 6.67E-6 T 14-09-2016 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 PANTHER PTHR10961:SF10 8 380 1.2E-103 T 14-09-2016 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 Gene3D G3DSA:3.30.9.10 223 337 1.2E-28 T 14-09-2016 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 Gene3D G3DSA:3.30.9.10 70 157 1.2E-28 T 14-09-2016 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 PANTHER PTHR10961 8 380 1.2E-103 T 14-09-2016 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 SUPERFAMILY SSF51905 337 374 3.02E-25 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 SUPERFAMILY SSF51905 5 225 3.02E-25 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS14675 41632a50c75a0a9a086dedb6a2b19130 395 Pfam PF01266 FAD dependent oxidoreductase 7 366 1.9E-30 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 66 512 5.1E-131 T 14-09-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 PANTHER PTHR30600 60 141 2.5E-123 T 14-09-2016 AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 Gene3D G3DSA:1.10.760.10 372 512 4.1E-16 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 PANTHER PTHR30600 217 265 2.5E-123 T 14-09-2016 AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 PANTHER PTHR30600:SF4 217 265 2.5E-123 T 14-09-2016 AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 PANTHER PTHR30600:SF4 290 512 2.5E-123 T 14-09-2016 AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 PANTHER PTHR30600:SF4 60 141 2.5E-123 T 14-09-2016 AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 PANTHER PTHR30600 290 512 2.5E-123 T 14-09-2016 AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 PIRSF PIRSF028099 4 512 2.8E-178 T 14-09-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase AMK01_RS01700 2c999d1910cbdfe0f84330a39200bca6 512 SUPERFAMILY SSF46626 371 512 3.48E-25 T 14-09-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 Gene3D G3DSA:1.10.10.10 9 67 6.7E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 PANTHER PTHR11751:SF356 9 93 1.5E-28 T 14-09-2016 AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.5E-5 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.5E-5 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 SUPERFAMILY SSF48008 74 206 2.88E-27 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 SMART SM00345 9 67 4.0E-17 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 PANTHER PTHR11751 9 93 1.5E-28 T 14-09-2016 AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 67 2.3E-17 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 SUPERFAMILY SSF46785 7 71 1.39E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 Gene3D G3DSA:1.20.120.530 73 211 4.5E-31 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 Pfam PF07729 FCD domain 77 199 1.8E-27 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS04685 3e4062502c460a9d6088af657bddd44b 216 SMART SM00895 77 201 8.8E-21 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS18240 d26e59252074cbca262172113b23282e 202 SUPERFAMILY SSF48452 80 196 2.22E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS18240 d26e59252074cbca262172113b23282e 202 PANTHER PTHR23083 82 181 4.5E-12 T 14-09-2016 AMK01_RS18240 d26e59252074cbca262172113b23282e 202 PANTHER PTHR23083 49 62 4.5E-12 T 14-09-2016 AMK01_RS18240 d26e59252074cbca262172113b23282e 202 SMART SM00028 150 183 150.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18240 d26e59252074cbca262172113b23282e 202 SMART SM00028 116 149 0.016 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18240 d26e59252074cbca262172113b23282e 202 SMART SM00028 82 115 63.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS18240 d26e59252074cbca262172113b23282e 202 Gene3D G3DSA:1.25.40.10 83 196 1.6E-17 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS20735 44f163754fda7dc34ffc78ed1b8bddb6 142 Pfam PF13924 Lipocalin-like domain 8 141 1.7E-35 T 14-09-2016 IPR024311 Lipocalin-like domain AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 Gene3D G3DSA:3.40.50.300 259 500 1.2E-44 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 SUPERFAMILY SSF52540 4 224 7.99E-53 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 Pfam PF00005 ABC transporter 280 436 3.6E-17 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 Pfam PF00005 ABC transporter 21 172 1.4E-27 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 PANTHER PTHR24220 7 391 1.1E-183 T 14-09-2016 AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 PANTHER PTHR24220:SF392 7 391 1.1E-183 T 14-09-2016 AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 SMART SM00382 30 219 1.6E-8 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 SMART SM00382 289 485 0.0015 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 Gene3D G3DSA:3.40.50.300 3 226 5.5E-59 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 SUPERFAMILY SSF52540 246 495 1.12E-44 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16115 10e56bc5247e06947bdc89d52037c7ea 512 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS05620 94b9e9f3eebd96258ac0c1110b303bd8 138 Gene3D G3DSA:3.40.630.30 64 127 4.3E-13 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS05620 94b9e9f3eebd96258ac0c1110b303bd8 138 SUPERFAMILY SSF55729 20 128 8.99E-14 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS05620 94b9e9f3eebd96258ac0c1110b303bd8 138 Pfam PF00583 Acetyltransferase (GNAT) family 63 101 1.5E-4 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS02980 b0def847906f71a53a639126244d3d35 134 PANTHER PTHR28620:SF2 4 133 2.0E-34 T 14-09-2016 AMK01_RS02980 b0def847906f71a53a639126244d3d35 134 PANTHER PTHR28620 4 133 2.0E-34 T 14-09-2016 AMK01_RS02980 b0def847906f71a53a639126244d3d35 134 SUPERFAMILY SSF51316 1 121 1.36E-23 T 14-09-2016 IPR011057 Mss4-like AMK01_RS02980 b0def847906f71a53a639126244d3d35 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 104 1.7E-7 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS02980 b0def847906f71a53a639126244d3d35 134 Gene3D G3DSA:3.90.1590.10 2 106 2.1E-15 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS15225 7d8ab8501cdaf723f2d009160f081d93 97 PANTHER PTHR33154 1 97 1.2E-22 T 14-09-2016 AMK01_RS15225 7d8ab8501cdaf723f2d009160f081d93 97 SMART SM00418 5 95 2.9E-14 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS15225 7d8ab8501cdaf723f2d009160f081d93 97 Gene3D G3DSA:1.10.10.10 2 95 1.7E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15225 7d8ab8501cdaf723f2d009160f081d93 97 Pfam PF12840 Helix-turn-helix domain 4 75 1.0E-18 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS15225 7d8ab8501cdaf723f2d009160f081d93 97 SUPERFAMILY SSF46785 4 95 1.59E-20 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 PANTHER PTHR11019:SF81 32 300 3.0E-73 T 14-09-2016 AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 SMART SM00342 209 292 6.7E-21 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 Gene3D G3DSA:1.10.10.60 247 289 3.7E-6 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 Gene3D G3DSA:1.10.10.60 189 246 7.0E-20 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 SUPERFAMILY SSF46689 192 243 3.22E-13 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 Pfam PF06719 AraC-type transcriptional regulator N-terminus 29 180 7.5E-46 T 14-09-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 PANTHER PTHR11019 32 300 3.0E-73 T 14-09-2016 AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 Pfam PF12833 Helix-turn-helix domain 215 289 4.9E-18 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS14155 d2e02338c2971074baf0c5c465e17a74 302 SUPERFAMILY SSF46689 245 290 2.78E-6 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS13965 d9569bedb4c72fce21101cb87d9d4cef 369 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 60 359 2.3E-12 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS13965 d9569bedb4c72fce21101cb87d9d4cef 369 Gene3D G3DSA:3.60.10.10 2 13 3.7E-18 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS13965 d9569bedb4c72fce21101cb87d9d4cef 369 Gene3D G3DSA:3.60.10.10 50 367 3.7E-18 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS13965 d9569bedb4c72fce21101cb87d9d4cef 369 SUPERFAMILY SSF56219 67 312 4.58E-29 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS13965 d9569bedb4c72fce21101cb87d9d4cef 369 SUPERFAMILY SSF56219 339 369 4.58E-29 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS13965 d9569bedb4c72fce21101cb87d9d4cef 369 SUPERFAMILY SSF56219 1 35 4.58E-29 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 SUPERFAMILY SSF46894 5 68 5.44E-19 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 PANTHER PTHR26402 9 65 3.0E-12 T 14-09-2016 AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 SMART SM00421 5 62 1.8E-17 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 Pfam PF00196 Bacterial regulatory proteins, luxR family 8 60 1.2E-17 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 ProSitePatterns PS00622 LuxR-type HTH domain signature. 22 49 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 38 50 2.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 22 38 2.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 8 22 2.6E-11 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS05310 d060885a55d1c90d74bab6b5bae8e80a 69 Gene3D G3DSA:1.10.10.10 9 68 2.5E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 SUPERFAMILY SSF51905 3 55 4.92E-43 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 SUPERFAMILY SSF51905 108 268 4.92E-43 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 SUPERFAMILY SSF51905 356 413 4.92E-43 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 PANTHER PTHR13847 108 413 3.7E-104 T 14-09-2016 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 PANTHER PTHR13847 6 61 3.7E-104 T 14-09-2016 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 Gene3D G3DSA:3.50.50.60 356 414 1.7E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 Gene3D G3DSA:3.50.50.60 109 131 1.7E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 Gene3D G3DSA:3.50.50.60 187 267 1.7E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 Gene3D G3DSA:3.50.50.60 4 59 1.7E-55 T 14-09-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 PANTHER PTHR13847:SF216 6 61 3.7E-104 T 14-09-2016 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 PANTHER PTHR13847:SF216 108 413 3.7E-104 T 14-09-2016 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 Pfam PF01266 FAD dependent oxidoreductase 5 395 3.3E-51 T 14-09-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMK01_RS03885 93fa24772905070deb06f7e05297f59c 415 SUPERFAMILY SSF54373 271 356 1.49E-7 T 14-09-2016 AMK01_RS00955 4ae0b03baad826e0f8f3ad46ec710619 281 SMART SM00382 26 230 1.5E-11 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS00955 4ae0b03baad826e0f8f3ad46ec710619 281 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 242 1.1E-95 T 14-09-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AMK01_RS00955 4ae0b03baad826e0f8f3ad46ec710619 281 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS00955 4ae0b03baad826e0f8f3ad46ec710619 281 Gene3D G3DSA:3.40.50.300 2 236 2.3E-71 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00955 4ae0b03baad826e0f8f3ad46ec710619 281 PANTHER PTHR24220:SF408 3 246 1.8E-113 T 14-09-2016 AMK01_RS00955 4ae0b03baad826e0f8f3ad46ec710619 281 PANTHER PTHR24220 3 246 1.8E-113 T 14-09-2016 AMK01_RS00955 4ae0b03baad826e0f8f3ad46ec710619 281 Pfam PF00005 ABC transporter 18 173 2.8E-35 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS00955 4ae0b03baad826e0f8f3ad46ec710619 281 SUPERFAMILY SSF52540 2 234 6.57E-64 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS08135 2d022ba7c2fc66cff468a71fa2e66388 347 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 225 238 - T 14-09-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 AMK01_RS08135 2d022ba7c2fc66cff468a71fa2e66388 347 Pfam PF00146 NADH dehydrogenase 20 337 8.8E-122 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK01_RS08135 2d022ba7c2fc66cff468a71fa2e66388 347 PANTHER PTHR11432:SF3 8 347 2.8E-161 T 14-09-2016 AMK01_RS08135 2d022ba7c2fc66cff468a71fa2e66388 347 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 344 24.167 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK01_RS08135 2d022ba7c2fc66cff468a71fa2e66388 347 PANTHER PTHR11432 8 347 2.8E-161 T 14-09-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 AMK01_RS18180 819a258b74a4863c1a2c4dc5a143da6c 122 SUPERFAMILY SSF52172 3 121 4.55E-37 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS18180 819a258b74a4863c1a2c4dc5a143da6c 122 PANTHER PTHR26402:SF586 3 122 1.7E-39 T 14-09-2016 AMK01_RS18180 819a258b74a4863c1a2c4dc5a143da6c 122 Pfam PF00072 Response regulator receiver domain 5 116 8.2E-28 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18180 819a258b74a4863c1a2c4dc5a143da6c 122 SMART SM00448 3 116 1.9E-36 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS18180 819a258b74a4863c1a2c4dc5a143da6c 122 PANTHER PTHR26402 3 122 1.7E-39 T 14-09-2016 AMK01_RS18180 819a258b74a4863c1a2c4dc5a143da6c 122 Gene3D G3DSA:3.40.50.2300 2 122 8.1E-38 T 14-09-2016 AMK01_RS19115 d5cb448ad7788f09f4aa41b34de39642 405 SMART SM00044 182 384 4.0E-4 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS19115 d5cb448ad7788f09f4aa41b34de39642 405 SUPERFAMILY SSF55073 211 399 5.97E-40 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS19115 d5cb448ad7788f09f4aa41b34de39642 405 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 218 398 7.6E-17 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS19115 d5cb448ad7788f09f4aa41b34de39642 405 Gene3D G3DSA:3.30.70.1230 217 399 1.2E-26 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS19115 d5cb448ad7788f09f4aa41b34de39642 405 PANTHER PTHR11920:SF348 163 399 8.4E-57 T 14-09-2016 AMK01_RS19115 d5cb448ad7788f09f4aa41b34de39642 405 PANTHER PTHR11920 163 399 8.4E-57 T 14-09-2016 AMK01_RS11680 618abb6419e83704849f372c2f2ef06b 184 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 7 170 7.6E-43 T 14-09-2016 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 AMK01_RS11680 618abb6419e83704849f372c2f2ef06b 184 SUPERFAMILY SSF56399 9 178 1.15E-59 T 14-09-2016 AMK01_RS11680 618abb6419e83704849f372c2f2ef06b 184 PANTHER PTHR12684 9 179 8.9E-59 T 14-09-2016 AMK01_RS11680 618abb6419e83704849f372c2f2ef06b 184 PANTHER PTHR12684:SF2 9 179 8.9E-59 T 14-09-2016 AMK01_RS11680 618abb6419e83704849f372c2f2ef06b 184 Gene3D G3DSA:3.90.228.10 47 120 7.0E-4 T 14-09-2016 IPR012317 Poly(ADP-ribose) polymerase, catalytic domain GO:0003950 AMK01_RS11680 618abb6419e83704849f372c2f2ef06b 184 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 6 177 31.674 T 14-09-2016 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 AMK01_RS19625 ed7a93d07f733f12efb0730fbbe8d35a 211 PANTHER PTHR34300 169 202 1.1E-44 T 14-09-2016 AMK01_RS19625 ed7a93d07f733f12efb0730fbbe8d35a 211 PANTHER PTHR34300:SF1 169 202 1.1E-44 T 14-09-2016 AMK01_RS19625 ed7a93d07f733f12efb0730fbbe8d35a 211 PANTHER PTHR34300:SF1 11 143 1.1E-44 T 14-09-2016 AMK01_RS19625 ed7a93d07f733f12efb0730fbbe8d35a 211 PANTHER PTHR34300 11 143 1.1E-44 T 14-09-2016 AMK01_RS19625 ed7a93d07f733f12efb0730fbbe8d35a 211 Pfam PF02592 Putative vitamin uptake transporter 43 86 2.7E-9 T 14-09-2016 IPR003744 Protein of unknown function DUF165 AMK01_RS19625 ed7a93d07f733f12efb0730fbbe8d35a 211 Pfam PF02592 Putative vitamin uptake transporter 83 195 5.5E-18 T 14-09-2016 IPR003744 Protein of unknown function DUF165 AMK01_RS14055 389ee1e739584f84d456dba7a8192a04 247 PANTHER PTHR10108:SF779 58 164 3.0E-15 T 14-09-2016 AMK01_RS14055 389ee1e739584f84d456dba7a8192a04 247 PANTHER PTHR10108:SF779 181 221 3.0E-15 T 14-09-2016 AMK01_RS14055 389ee1e739584f84d456dba7a8192a04 247 SUPERFAMILY SSF53335 41 221 2.69E-27 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14055 389ee1e739584f84d456dba7a8192a04 247 Pfam PF08003 Protein of unknown function (DUF1698) 2 219 5.1E-20 T 14-09-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like AMK01_RS14055 389ee1e739584f84d456dba7a8192a04 247 PANTHER PTHR10108 58 164 3.0E-15 T 14-09-2016 AMK01_RS14055 389ee1e739584f84d456dba7a8192a04 247 PANTHER PTHR10108 181 221 3.0E-15 T 14-09-2016 AMK01_RS14055 389ee1e739584f84d456dba7a8192a04 247 Gene3D G3DSA:3.40.50.150 54 220 4.6E-24 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14055 389ee1e739584f84d456dba7a8192a04 247 TIGRFAM TIGR04290 meth_Rta_06860: methyltransferase, Rta_06860 family 7 230 1.5E-114 T 14-09-2016 IPR027554 Methyltransferase, Rta_06860 family AMK01_RS16870 9de7c87a437cdc691979a1739ee541d0 317 SMART SM00911 120 202 1.7E-30 T 14-09-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMK01_RS16870 9de7c87a437cdc691979a1739ee541d0 317 PANTHER PTHR41523 97 317 7.2E-30 T 14-09-2016 AMK01_RS16870 9de7c87a437cdc691979a1739ee541d0 317 Pfam PF07536 HWE histidine kinase 120 200 5.6E-25 T 14-09-2016 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMK01_RS27455 0fbedcb08524043eed692533fe86a01e 121 Gene3D G3DSA:3.40.190.10 9 93 3.1E-6 T 14-09-2016 AMK01_RS27455 0fbedcb08524043eed692533fe86a01e 121 SUPERFAMILY SSF53850 4 106 7.44E-8 T 14-09-2016 AMK01_RS07990 6b138e788e9c58aaffabad103ad520bf 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 117 3.8E-9 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS07990 6b138e788e9c58aaffabad103ad520bf 125 Gene3D G3DSA:3.10.180.10 5 121 7.4E-22 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS07990 6b138e788e9c58aaffabad103ad520bf 125 SUPERFAMILY SSF54593 6 120 4.03E-19 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS07875 13dcc3336f3e843dd8a3d06dbee1a825 277 Gene3D G3DSA:1.10.3720.10 11 265 7.4E-62 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07875 13dcc3336f3e843dd8a3d06dbee1a825 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 269 3.8E-20 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07875 13dcc3336f3e843dd8a3d06dbee1a825 277 PANTHER PTHR32243 1 277 1.4E-75 T 14-09-2016 AMK01_RS07875 13dcc3336f3e843dd8a3d06dbee1a825 277 SUPERFAMILY SSF161098 12 277 9.81E-66 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS15055 9981b9754ca8bc578aad3376c1351c89 132 PANTHER PTHR34310 9 124 8.4E-52 T 14-09-2016 AMK01_RS15055 9981b9754ca8bc578aad3376c1351c89 132 PANTHER PTHR34310:SF3 9 124 8.4E-52 T 14-09-2016 AMK01_RS15055 9981b9754ca8bc578aad3376c1351c89 132 Pfam PF04248 Domain of unknown function (DUF427) 25 116 4.7E-34 T 14-09-2016 IPR007361 Domain of unknown function DUF427 AMK01_RS18370 d099d9062c051b906744880302119248 295 Pfam PF00483 Nucleotidyl transferase 14 272 5.5E-22 T 14-09-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK01_RS18370 d099d9062c051b906744880302119248 295 Gene3D G3DSA:3.90.550.10 7 278 7.0E-63 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS18370 d099d9062c051b906744880302119248 295 PANTHER PTHR22572:SF14 9 284 7.7E-93 T 14-09-2016 AMK01_RS18370 d099d9062c051b906744880302119248 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 267 9.9E-103 T 14-09-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AMK01_RS18370 d099d9062c051b906744880302119248 295 PANTHER PTHR22572 9 284 7.7E-93 T 14-09-2016 AMK01_RS18370 d099d9062c051b906744880302119248 295 SUPERFAMILY SSF53448 7 278 6.31E-60 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS18570 08a625a7c44e9844467f302ab77fdd8a 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 3.4E-11 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS18570 08a625a7c44e9844467f302ab77fdd8a 132 SUPERFAMILY SSF54593 2 129 1.79E-24 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS18570 08a625a7c44e9844467f302ab77fdd8a 132 Gene3D G3DSA:3.10.180.10 1 127 2.2E-35 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS18570 08a625a7c44e9844467f302ab77fdd8a 132 PANTHER PTHR35006 1 132 2.4E-41 T 14-09-2016 AMK01_RS09325 745aa575743cb21d2d36d24ed82293f5 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 259 4.9E-15 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS09325 745aa575743cb21d2d36d24ed82293f5 267 SUPERFAMILY SSF56219 1 266 9.68E-30 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS09325 745aa575743cb21d2d36d24ed82293f5 267 Gene3D G3DSA:3.60.10.10 1 266 7.4E-14 T 14-09-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK01_RS18485 fb303a06941b2139538a3834f18ea583 163 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 154 1.8E-20 T 14-09-2016 IPR009936 Protein of unknown function DUF1468 AMK01_RS21255 44863641e657471555e4fe7964bd8dcb 198 SUPERFAMILY SSF56719 152 194 3.66E-9 T 14-09-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMK01_RS21255 44863641e657471555e4fe7964bd8dcb 198 PRINTS PR00418 DNA topoisomerase II family signature 16 33 2.0E-5 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS21255 44863641e657471555e4fe7964bd8dcb 198 PRINTS PR00418 DNA topoisomerase II family signature 159 175 2.0E-5 T 14-09-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS21255 44863641e657471555e4fe7964bd8dcb 198 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 155 196 2.6E-18 T 14-09-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS21255 44863641e657471555e4fe7964bd8dcb 198 Gene3D G3DSA:3.40.50.670 144 197 9.7E-14 T 14-09-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK01_RS21255 44863641e657471555e4fe7964bd8dcb 198 PANTHER PTHR10169 144 197 2.5E-12 T 14-09-2016 AMK01_RS19885 eb4e316d0d493dde5def5c4bb9929b4b 245 Pfam PF02397 Bacterial sugar transferase 51 237 2.5E-54 T 14-09-2016 IPR003362 Bacterial sugar transferase AMK01_RS19885 eb4e316d0d493dde5def5c4bb9929b4b 245 PANTHER PTHR30576:SF0 45 245 6.9E-82 T 14-09-2016 AMK01_RS19885 eb4e316d0d493dde5def5c4bb9929b4b 245 PANTHER PTHR30576 45 245 6.9E-82 T 14-09-2016 AMK01_RS18125 34b2e0300072ae9f44f69f5c8913c3db 423 Gene3D G3DSA:1.10.1740.10 7 78 5.6E-7 T 14-09-2016 AMK01_RS18125 34b2e0300072ae9f44f69f5c8913c3db 423 PANTHER PTHR30173:SF7 7 382 1.6E-72 T 14-09-2016 AMK01_RS18125 34b2e0300072ae9f44f69f5c8913c3db 423 SUPERFAMILY SSF88946 6 73 3.02E-8 T 14-09-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK01_RS18125 34b2e0300072ae9f44f69f5c8913c3db 423 PANTHER PTHR30173 7 382 1.6E-72 T 14-09-2016 AMK01_RS20940 0ca093d7eef984fe00de67f5fc466c91 160 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 28.296 T 14-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS20940 0ca093d7eef984fe00de67f5fc466c91 160 PANTHER PTHR33603:SF1 1 159 1.0E-47 T 14-09-2016 AMK01_RS20940 0ca093d7eef984fe00de67f5fc466c91 160 SUPERFAMILY SSF75217 1 157 1.37E-47 T 14-09-2016 IPR029028 Alpha/beta knot methyltransferases AMK01_RS20940 0ca093d7eef984fe00de67f5fc466c91 160 PANTHER PTHR33603 1 159 1.0E-47 T 14-09-2016 AMK01_RS20940 0ca093d7eef984fe00de67f5fc466c91 160 Gene3D G3DSA:3.40.1280.10 1 159 6.3E-57 T 14-09-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK01_RS20940 0ca093d7eef984fe00de67f5fc466c91 160 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 8.1E-47 T 14-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS20940 0ca093d7eef984fe00de67f5fc466c91 160 PIRSF PIRSF004505 1 159 4.7E-49 T 14-09-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK01_RS04660 5c781afeb07b52df19df146aa98d4498 307 Gene3D G3DSA:2.60.120.10 27 263 1.0E-67 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS04660 5c781afeb07b52df19df146aa98d4498 307 PANTHER PTHR13903 18 307 1.6E-116 T 14-09-2016 IPR012093 Pirin AMK01_RS04660 5c781afeb07b52df19df146aa98d4498 307 PIRSF PIRSF006232 16 300 4.6E-89 T 14-09-2016 IPR012093 Pirin AMK01_RS04660 5c781afeb07b52df19df146aa98d4498 307 SUPERFAMILY SSF51182 22 303 8.47E-84 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS04660 5c781afeb07b52df19df146aa98d4498 307 Pfam PF05726 Pirin C-terminal cupin domain 192 292 1.5E-29 T 14-09-2016 IPR008778 Pirin, C-terminal domain AMK01_RS04660 5c781afeb07b52df19df146aa98d4498 307 Pfam PF02678 Pirin 34 139 5.2E-33 T 14-09-2016 IPR003829 Pirin, N-terminal domain AMK01_RS04660 5c781afeb07b52df19df146aa98d4498 307 PANTHER PTHR13903:SF4 18 307 1.6E-116 T 14-09-2016 AMK01_RS13375 719c677569fbec0a2e5d027e04eafd6c 258 Pfam PF00775 Dioxygenase 85 208 1.7E-10 T 14-09-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AMK01_RS13375 719c677569fbec0a2e5d027e04eafd6c 258 SUPERFAMILY SSF49482 57 233 4.06E-44 T 14-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMK01_RS13375 719c677569fbec0a2e5d027e04eafd6c 258 Gene3D G3DSA:2.60.130.10 58 232 7.0E-43 T 14-09-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AMK01_RS13375 719c677569fbec0a2e5d027e04eafd6c 258 PANTHER PTHR34315 67 257 5.7E-35 T 14-09-2016 AMK01_RS16355 0e8caa0fc90255232d4de9d176bd4350 141 PANTHER PTHR38468 1 131 8.1E-24 T 14-09-2016 AMK01_RS16355 0e8caa0fc90255232d4de9d176bd4350 141 Pfam PF07784 Protein of unknown function (DUF1622) 36 114 8.8E-28 T 14-09-2016 IPR012427 Protein of unknown function DUF1622 AMK01_RS00435 3422c0990c4b5406f76fd1ec2efd77ea 292 Gene3D G3DSA:1.10.3720.10 16 279 7.6E-63 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00435 3422c0990c4b5406f76fd1ec2efd77ea 292 PANTHER PTHR32243 12 292 1.1E-122 T 14-09-2016 AMK01_RS00435 3422c0990c4b5406f76fd1ec2efd77ea 292 SUPERFAMILY SSF161098 16 291 1.59E-72 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS00435 3422c0990c4b5406f76fd1ec2efd77ea 292 PANTHER PTHR32243:SF8 12 292 1.1E-122 T 14-09-2016 AMK01_RS00435 3422c0990c4b5406f76fd1ec2efd77ea 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 281 2.6E-21 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS18585 2562a129203a0c9bb039d0841eaf2bac 113 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 87 8.4E-38 T 14-09-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AMK01_RS18585 2562a129203a0c9bb039d0841eaf2bac 113 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 85 1.9E-32 T 14-09-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AMK01_RS18630 d1ac89de8b2c17188b8382190d161924 160 Pfam PF06186 Protein of unknown function (DUF992) 16 155 5.4E-47 T 14-09-2016 IPR009333 Protein of unknown function DUF992 AMK01_RS02010 9b63c363f500e6792d34107dc6cf3ef0 141 Gene3D G3DSA:2.60.40.790 47 140 6.7E-13 T 14-09-2016 IPR008978 HSP20-like chaperone AMK01_RS02010 9b63c363f500e6792d34107dc6cf3ef0 141 SUPERFAMILY SSF49764 33 137 4.5E-17 T 14-09-2016 IPR008978 HSP20-like chaperone AMK01_RS02010 9b63c363f500e6792d34107dc6cf3ef0 141 Pfam PF00011 Hsp20/alpha crystallin family 48 138 1.4E-16 T 14-09-2016 IPR002068 Alpha crystallin/Hsp20 domain AMK01_RS02010 9b63c363f500e6792d34107dc6cf3ef0 141 PANTHER PTHR11527:SF127 9 138 3.5E-26 T 14-09-2016 AMK01_RS02010 9b63c363f500e6792d34107dc6cf3ef0 141 PANTHER PTHR11527 9 138 3.5E-26 T 14-09-2016 IPR031107 Small heat shock protein HSP20 AMK01_RS14525 9db6534a023fb7655bfd78c3d341caa7 200 PANTHER PTHR12151 41 199 6.8E-52 T 14-09-2016 IPR003782 Copper chaperone SCO1/SenC AMK01_RS14525 9db6534a023fb7655bfd78c3d341caa7 200 Gene3D G3DSA:3.40.30.10 9 198 7.1E-55 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS14525 9db6534a023fb7655bfd78c3d341caa7 200 SUPERFAMILY SSF52833 39 197 4.57E-46 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS14525 9db6534a023fb7655bfd78c3d341caa7 200 Pfam PF02630 SCO1/SenC 35 177 1.8E-38 T 14-09-2016 IPR003782 Copper chaperone SCO1/SenC AMK01_RS09665 b14c5f4b58efcdeaef6e85d3df5e92dc 156 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 8 152 7.8E-36 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS09665 b14c5f4b58efcdeaef6e85d3df5e92dc 156 PANTHER PTHR11803 1 156 3.1E-47 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS09665 b14c5f4b58efcdeaef6e85d3df5e92dc 156 PANTHER PTHR11803:SF2 1 156 3.1E-47 T 14-09-2016 AMK01_RS09665 b14c5f4b58efcdeaef6e85d3df5e92dc 156 Gene3D G3DSA:3.30.1330.40 2 154 1.7E-63 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS09665 b14c5f4b58efcdeaef6e85d3df5e92dc 156 SUPERFAMILY SSF55298 4 154 8.01E-54 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS04150 aed3fa34518bbbd2ceacde029cfea536 224 SUPERFAMILY SSF56925 49 224 1.41E-17 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS04150 aed3fa34518bbbd2ceacde029cfea536 224 Pfam PF13505 Outer membrane protein beta-barrel domain 15 223 6.8E-18 T 14-09-2016 IPR027385 Outer membrane protein beta-barrel AMK01_RS04150 aed3fa34518bbbd2ceacde029cfea536 224 Gene3D G3DSA:2.40.160.20 85 223 6.0E-12 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS18300 aedf83c67fb88b2e21da57ac2dfadc2a 87 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 8 79 1.5E-35 T 14-09-2016 IPR018753 Azospirillum phage Cd, Gp10 AMK01_RS18300 aedf83c67fb88b2e21da57ac2dfadc2a 87 Hamap MF_00797 UPF0335 protein . 3 80 22.59 T 14-09-2016 IPR018753 Azospirillum phage Cd, Gp10 AMK01_RS16820 7bb916f12ed5b315cb215e792c909b87 104 SUPERFAMILY SSF54909 1 101 4.95E-29 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS16820 7bb916f12ed5b315cb215e792c909b87 104 PANTHER PTHR34474 1 85 7.1E-27 T 14-09-2016 AMK01_RS16820 7bb916f12ed5b315cb215e792c909b87 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 80 4.1E-20 T 14-09-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain AMK01_RS16820 7bb916f12ed5b315cb215e792c909b87 104 PANTHER PTHR34474:SF2 1 85 7.1E-27 T 14-09-2016 AMK01_RS16820 7bb916f12ed5b315cb215e792c909b87 104 Gene3D G3DSA:3.30.70.900 1 101 2.3E-35 T 14-09-2016 AMK01_RS15830 b34844f49a1b614c5650048f6ab7262c 329 SUPERFAMILY SSF88713 21 64 2.78E-24 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS15830 b34844f49a1b614c5650048f6ab7262c 329 SUPERFAMILY SSF88713 95 320 2.78E-24 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS15830 b34844f49a1b614c5650048f6ab7262c 329 Gene3D G3DSA:3.20.20.370 100 314 1.9E-9 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS15830 b34844f49a1b614c5650048f6ab7262c 329 Gene3D G3DSA:3.20.20.370 26 61 1.9E-9 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 Gene3D G3DSA:1.10.10.10 26 159 3.7E-32 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 SMART SM00347 43 143 2.1E-15 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 Pfam PF01047 MarR family 57 106 1.0E-11 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 1.4E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 1.4E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 1.4E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 1.4E-7 T 14-09-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 PANTHER PTHR33164 29 167 1.5E-22 T 14-09-2016 AMK01_RS18695 bb2105a9df018996dc492326739ce752 170 SUPERFAMILY SSF46785 25 160 3.17E-28 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04720 c7e6c200cda498ec09c0c6f600971315 379 Pfam PF01757 Acyltransferase family 12 344 2.8E-23 T 14-09-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK01_RS04720 c7e6c200cda498ec09c0c6f600971315 379 PANTHER PTHR23028 1 365 4.2E-17 T 14-09-2016 AMK01_RS14005 0efde2e76f577aa65fe6dc4c9d7ba0a0 347 SUPERFAMILY SSF74853 247 339 2.49E-9 T 14-09-2016 IPR001322 Lamin Tail Domain AMK01_RS14005 0efde2e76f577aa65fe6dc4c9d7ba0a0 347 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 2 212 3.5E-54 T 14-09-2016 IPR019268 Protein of unknown function DUF2278 AMK01_RS14005 0efde2e76f577aa65fe6dc4c9d7ba0a0 347 Pfam PF00932 Lamin Tail Domain 247 335 7.8E-13 T 14-09-2016 IPR001322 Lamin Tail Domain AMK01_RS00505 a9287ce4c7095e99d0b4ccf52f396f48 215 Pfam PF02224 Cytidylate kinase 8 199 1.7E-56 T 14-09-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK01_RS00505 a9287ce4c7095e99d0b4ccf52f396f48 215 PANTHER PTHR21299 8 197 3.5E-45 T 14-09-2016 AMK01_RS00505 a9287ce4c7095e99d0b4ccf52f396f48 215 Hamap MF_00238 Cytidylate kinase [cmk]. 6 211 30.736 T 14-09-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK01_RS00505 a9287ce4c7095e99d0b4ccf52f396f48 215 SUPERFAMILY SSF52540 6 210 5.88E-42 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00505 a9287ce4c7095e99d0b4ccf52f396f48 215 Gene3D G3DSA:3.40.50.300 6 208 3.7E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00505 a9287ce4c7095e99d0b4ccf52f396f48 215 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 200 6.0E-53 T 14-09-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK01_RS21070 80d5045dcfc969ae89315a95b4c76bb7 274 SUPERFAMILY SSF53955 26 273 2.67E-72 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS21070 80d5045dcfc969ae89315a95b4c76bb7 274 Gene3D G3DSA:1.10.530.10 80 136 1.8E-23 T 14-09-2016 AMK01_RS21070 80d5045dcfc969ae89315a95b4c76bb7 274 Gene3D G3DSA:1.10.530.10 241 272 7.3E-4 T 14-09-2016 AMK01_RS21070 80d5045dcfc969ae89315a95b4c76bb7 274 Gene3D G3DSA:1.10.530.10 216 238 1.8E-23 T 14-09-2016 AMK01_RS21070 80d5045dcfc969ae89315a95b4c76bb7 274 PANTHER PTHR30163 1 261 2.9E-79 T 14-09-2016 IPR011757 Lytic transglycosylase MltB AMK01_RS21070 80d5045dcfc969ae89315a95b4c76bb7 274 Pfam PF13406 Transglycosylase SLT domain 36 239 9.9E-71 T 14-09-2016 IPR031304 Transglycosylase SLT domain 2 AMK01_RS21070 80d5045dcfc969ae89315a95b4c76bb7 274 PANTHER PTHR30163:SF2 1 261 2.9E-79 T 14-09-2016 AMK01_RS18025 b8f996d89903f61ecd4840734890728f 327 PANTHER PTHR10366 2 322 3.6E-121 T 14-09-2016 AMK01_RS18025 b8f996d89903f61ecd4840734890728f 327 PANTHER PTHR10366:SF448 2 322 3.6E-121 T 14-09-2016 AMK01_RS18025 b8f996d89903f61ecd4840734890728f 327 Gene3D G3DSA:3.40.50.720 1 289 3.7E-36 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18025 b8f996d89903f61ecd4840734890728f 327 SUPERFAMILY SSF51735 1 289 3.13E-47 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS18025 b8f996d89903f61ecd4840734890728f 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 211 5.6E-22 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS17025 447461148436a10a7c6b5f9c912bf70b 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 8.2E-102 T 14-09-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE AMK01_RS17025 447461148436a10a7c6b5f9c912bf70b 231 Gene3D G3DSA:3.40.50.300 1 222 4.5E-61 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17025 447461148436a10a7c6b5f9c912bf70b 231 SUPERFAMILY SSF52540 2 220 1.18E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17025 447461148436a10a7c6b5f9c912bf70b 231 SMART SM00382 26 218 2.1E-4 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS17025 447461148436a10a7c6b5f9c912bf70b 231 PANTHER PTHR24220 3 221 1.6E-119 T 14-09-2016 AMK01_RS17025 447461148436a10a7c6b5f9c912bf70b 231 Pfam PF00005 ABC transporter 17 160 1.9E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS17025 447461148436a10a7c6b5f9c912bf70b 231 PANTHER PTHR24220:SF404 3 221 1.6E-119 T 14-09-2016 AMK01_RS13735 8d2171f1371e25ace14a9c85f653aab8 191 SUPERFAMILY SSF51735 5 117 1.19E-13 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13735 8d2171f1371e25ace14a9c85f653aab8 191 Gene3D G3DSA:3.40.50.720 4 91 4.1E-11 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS13735 8d2171f1371e25ace14a9c85f653aab8 191 Pfam PF00106 short chain dehydrogenase 2 49 2.0E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS20930 afd61386b0160801e502fff7cecc5ebc 125 SUPERFAMILY SSF46785 12 108 6.33E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20930 afd61386b0160801e502fff7cecc5ebc 125 Gene3D G3DSA:1.10.10.10 12 117 3.2E-40 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS20930 afd61386b0160801e502fff7cecc5ebc 125 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 89 3.0E-10 T 14-09-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK01_RS20930 afd61386b0160801e502fff7cecc5ebc 125 PANTHER PTHR30432 13 110 4.2E-21 T 14-09-2016 AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 PANTHER PTHR24220 10 337 8.5E-145 T 14-09-2016 AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 SUPERFAMILY SSF52540 8 262 1.89E-67 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 314 1.3E-20 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 SMART SM00382 37 250 6.2E-12 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 Gene3D G3DSA:3.40.50.300 7 266 4.4E-73 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 PANTHER PTHR24220:SF586 10 337 8.5E-145 T 14-09-2016 AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 Pfam PF00005 ABC transporter 29 192 1.2E-24 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS03215 e746cc4a29a7b33a9fc8042cb712257d 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 333 1.4E-26 T 14-09-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK01_RS11080 3502f5756bd1dbc07331e72a4eac7035 367 PANTHER PTHR34183:SF1 70 201 2.8E-58 T 14-09-2016 AMK01_RS11080 3502f5756bd1dbc07331e72a4eac7035 367 PANTHER PTHR34183 70 201 2.8E-58 T 14-09-2016 AMK01_RS11080 3502f5756bd1dbc07331e72a4eac7035 367 Gene3D G3DSA:2.40.40.10 134 185 5.3E-4 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS11080 3502f5756bd1dbc07331e72a4eac7035 367 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 96 190 1.2E-39 T 14-09-2016 IPR012997 Rare lipoprotein A AMK01_RS11080 3502f5756bd1dbc07331e72a4eac7035 367 Pfam PF03330 Lytic transglycolase 95 183 6.7E-23 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS11080 3502f5756bd1dbc07331e72a4eac7035 367 SUPERFAMILY SSF50685 91 185 1.12E-9 T 14-09-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK01_RS15160 ff71149a582702c7eaaf1d292965c345 305 Pfam PF04228 Putative neutral zinc metallopeptidase 1 301 1.4E-131 T 14-09-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMK01_RS15160 ff71149a582702c7eaaf1d292965c345 305 PANTHER PTHR30168 2 305 9.6E-135 T 14-09-2016 AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.2E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.2E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.2E-12 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 SUPERFAMILY SSF51735 3 261 9.59E-62 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 Gene3D G3DSA:3.40.50.720 4 254 2.6E-66 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PANTHER PTHR24322 145 177 1.1E-50 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PANTHER PTHR24322 9 129 1.1E-50 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 8.0E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.0E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 8.0E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 8.0E-24 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS02800 ac28b4f63e7977a61f5a58c98fe5ce9a 273 Pfam PF00106 short chain dehydrogenase 5 189 2.7E-48 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS04820 4ee771a47798bbcabcbeb1a272a5f6fd 165 PANTHER PTHR12629:SF0 29 157 1.9E-12 T 14-09-2016 AMK01_RS04820 4ee771a47798bbcabcbeb1a272a5f6fd 165 SUPERFAMILY SSF55811 29 157 1.62E-17 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS04820 4ee771a47798bbcabcbeb1a272a5f6fd 165 Pfam PF00293 NUDIX domain 38 146 6.7E-8 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS04820 4ee771a47798bbcabcbeb1a272a5f6fd 165 PANTHER PTHR12629 29 157 1.9E-12 T 14-09-2016 AMK01_RS04820 4ee771a47798bbcabcbeb1a272a5f6fd 165 Gene3D G3DSA:3.90.79.10 29 156 2.6E-15 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS20095 8e168b656cf20e413d740f114871b834 536 SUPERFAMILY SSF48452 243 363 2.85E-7 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS20095 8e168b656cf20e413d740f114871b834 536 PIRSF PIRSF031802 2 536 3.2E-183 T 14-09-2016 IPR016982 Uncharacterised conserved protein UCP031802 AMK01_RS20095 8e168b656cf20e413d740f114871b834 536 Gene3D G3DSA:1.25.40.10 125 392 4.7E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS20095 8e168b656cf20e413d740f114871b834 536 Pfam PF07219 HemY protein N-terminus 27 134 1.8E-25 T 14-09-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 AMK01_RS16640 02f97845264d2e42075620779d9d630c 158 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 2 112 4.5E-15 T 14-09-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK01_RS16640 02f97845264d2e42075620779d9d630c 158 SUPERFAMILY SSF53756 2 90 1.6E-10 T 14-09-2016 AMK01_RS16640 02f97845264d2e42075620779d9d630c 158 Gene3D G3DSA:3.40.50.2000 2 134 4.7E-22 T 14-09-2016 AMK01_RS10685 f8563041c73233dbca560ae07b38f02e 361 PANTHER PTHR32196:SF22 1 350 1.5E-78 T 14-09-2016 AMK01_RS10685 f8563041c73233dbca560ae07b38f02e 361 PANTHER PTHR32196 1 350 1.5E-78 T 14-09-2016 AMK01_RS10685 f8563041c73233dbca560ae07b38f02e 361 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 339 1.4E-44 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS16450 ac2b16564ef1e9710863c53e9c40760c 108 Pfam PF08734 GYD domain 4 94 1.8E-24 T 14-09-2016 IPR014845 Uncharacterised protein GYD AMK01_RS10465 0baf0dcbb48d581f7a8a1a89decea6f5 338 Pfam PF09084 NMT1/THI5 like 42 243 2.7E-28 T 14-09-2016 IPR015168 SsuA/THI5-like AMK01_RS10465 0baf0dcbb48d581f7a8a1a89decea6f5 338 PANTHER PTHR31528:SF6 24 337 2.1E-106 T 14-09-2016 AMK01_RS10465 0baf0dcbb48d581f7a8a1a89decea6f5 338 PANTHER PTHR31528 24 337 2.1E-106 T 14-09-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 AMK01_RS10465 0baf0dcbb48d581f7a8a1a89decea6f5 338 SUPERFAMILY SSF53850 30 258 8.07E-24 T 14-09-2016 AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 SUPERFAMILY SSF46894 171 248 1.8E-19 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 PANTHER PTHR26402 183 245 3.2E-13 T 14-09-2016 AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 Pfam PF00196 Bacterial regulatory proteins, luxR family 188 242 1.4E-16 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 Gene3D G3DSA:1.10.10.10 187 248 3.0E-25 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 ProSitePatterns PS00622 LuxR-type HTH domain signature. 202 229 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 218 5.5E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 230 5.5E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 202 5.5E-10 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03430 a7cf515335352ecbaab3c91ee21f2b15 248 SMART SM00421 185 242 3.8E-22 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS14785 2a3d633d1c4fb51253525979dbb93339 112 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 2 104 2.7E-27 T 14-09-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMK01_RS14785 2a3d633d1c4fb51253525979dbb93339 112 Pfam PF04273 Putative phosphatase (DUF442) 2 105 1.5E-29 T 14-09-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMK01_RS14785 2a3d633d1c4fb51253525979dbb93339 112 Gene3D G3DSA:3.90.190.10 1 108 2.0E-37 T 14-09-2016 IPR029021 Protein-tyrosine phosphatase-like AMK01_RS14785 2a3d633d1c4fb51253525979dbb93339 112 SUPERFAMILY SSF52799 2 102 2.26E-7 T 14-09-2016 IPR029021 Protein-tyrosine phosphatase-like AMK01_RS06005 09ca57fbc54a68fae24736ea9ea1d6c5 307 Gene3D G3DSA:3.40.50.1820 63 294 9.9E-35 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS06005 09ca57fbc54a68fae24736ea9ea1d6c5 307 Pfam PF00326 Prolyl oligopeptidase family 128 256 7.7E-13 T 14-09-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMK01_RS06005 09ca57fbc54a68fae24736ea9ea1d6c5 307 PANTHER PTHR11731 106 256 7.9E-12 T 14-09-2016 AMK01_RS06005 09ca57fbc54a68fae24736ea9ea1d6c5 307 SUPERFAMILY SSF53474 56 290 5.59E-34 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS01610 30c8ff473a17b969494bacd27ca34e0b 353 PANTHER PTHR37326 5 337 1.3E-12 T 14-09-2016 AMK01_RS01610 30c8ff473a17b969494bacd27ca34e0b 353 SUPERFAMILY SSF53187 18 339 5.62E-39 T 14-09-2016 AMK01_RS01610 30c8ff473a17b969494bacd27ca34e0b 353 Gene3D G3DSA:3.40.630.10 18 226 1.1E-17 T 14-09-2016 AMK01_RS01610 30c8ff473a17b969494bacd27ca34e0b 353 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 31 337 1.1E-59 T 14-09-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AMK01_RS00920 3ec2a3670d61ca30fdcd122f0bcbc7e2 168 Pfam PF04229 GrpB protein 4 161 2.4E-39 T 14-09-2016 IPR007344 GrpB/Dephospho-CoA kinase AMK01_RS00920 3ec2a3670d61ca30fdcd122f0bcbc7e2 168 Gene3D G3DSA:3.30.460.10 2 164 1.9E-44 T 14-09-2016 AMK01_RS00920 3ec2a3670d61ca30fdcd122f0bcbc7e2 168 SUPERFAMILY SSF81301 6 164 1.08E-43 T 14-09-2016 AMK01_RS00920 3ec2a3670d61ca30fdcd122f0bcbc7e2 168 PANTHER PTHR34822 1 165 4.6E-39 T 14-09-2016 AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 Gene3D G3DSA:1.25.40.10 1056 1134 2.4E-22 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 Gene3D G3DSA:1.25.40.10 975 1055 4.1E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 PANTHER PTHR11102 966 1132 1.8E-41 T 14-09-2016 AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 PANTHER PTHR11102 65 70 1.8E-41 T 14-09-2016 AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 SUPERFAMILY SSF81901 977 1132 4.97E-36 T 14-09-2016 AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 Pfam PF01471 Putative peptidoglycan binding domain 1190 1243 5.9E-10 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 Gene3D G3DSA:1.10.101.10 1187 1250 3.3E-13 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 SMART SM00671 1057 1092 2.3E-5 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 SMART SM00671 984 1020 3.7E-5 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 SMART SM00671 1093 1128 2.5E-6 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 SMART SM00671 1021 1056 1.6E-10 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 Pfam PF08238 Sel1 repeat 1094 1128 4.8E-5 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 Pfam PF08238 Sel1 repeat 1021 1056 2.5E-9 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 Pfam PF08238 Sel1 repeat 1057 1091 6.9E-4 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 Pfam PF08238 Sel1 repeat 985 1019 0.0082 T 14-09-2016 IPR006597 Sel1-like repeat AMK01_RS02945 551856d7772c6abc7aa93f2e6a2a4f27 1254 SUPERFAMILY SSF47090 1188 1244 9.68E-13 T 14-09-2016 IPR002477 Peptidoglycan binding-like AMK01_RS10260 dc81604ba559e4e985a4a95e8cc3d8a3 172 SUPERFAMILY SSF47413 85 137 5.0E-7 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS10260 dc81604ba559e4e985a4a95e8cc3d8a3 172 Pfam PF01381 Helix-turn-helix 90 137 4.0E-5 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS10260 dc81604ba559e4e985a4a95e8cc3d8a3 172 Gene3D G3DSA:1.10.260.40 4 56 1.9E-6 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS10260 dc81604ba559e4e985a4a95e8cc3d8a3 172 SUPERFAMILY SSF47413 2 63 1.1E-6 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS10260 dc81604ba559e4e985a4a95e8cc3d8a3 172 SMART SM00530 88 144 3.7E-5 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS10260 dc81604ba559e4e985a4a95e8cc3d8a3 172 SMART SM00530 7 62 0.07 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS10260 dc81604ba559e4e985a4a95e8cc3d8a3 172 Gene3D G3DSA:1.10.260.40 86 137 1.6E-6 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS20935 3b99cda8fd163e7b510be7f7e664877d 147 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 27 137 24.947 T 14-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK01_RS20935 3b99cda8fd163e7b510be7f7e664877d 147 PANTHER PTHR21043 39 147 1.9E-39 T 14-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK01_RS20935 3b99cda8fd163e7b510be7f7e664877d 147 SUPERFAMILY SSF81301 38 139 2.29E-36 T 14-09-2016 AMK01_RS20935 3b99cda8fd163e7b510be7f7e664877d 147 Pfam PF02410 Ribosomal silencing factor during starvation 41 136 5.7E-27 T 14-09-2016 AMK01_RS20935 3b99cda8fd163e7b510be7f7e664877d 147 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 40 136 4.0E-35 T 14-09-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK01_RS20935 3b99cda8fd163e7b510be7f7e664877d 147 Gene3D G3DSA:3.30.460.10 37 137 4.5E-37 T 14-09-2016 AMK01_RS05845 6676803301ae58a547478dd73e007ed5 80 SUPERFAMILY SSF47598 1 43 1.33E-8 T 14-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK01_RS05845 6676803301ae58a547478dd73e007ed5 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 59 5.8E-6 T 14-09-2016 IPR022789 Antitoxin ParD AMK01_RS05845 6676803301ae58a547478dd73e007ed5 80 Gene3D G3DSA:1.10.1220.10 4 37 8.9E-4 T 14-09-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMK01_RS24480 d558dcbfaecb4a28b37ccf6656b9566d 94 Pfam PF00378 Enoyl-CoA hydratase/isomerase 39 94 2.6E-14 T 14-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK01_RS24480 d558dcbfaecb4a28b37ccf6656b9566d 94 Gene3D G3DSA:3.90.226.10 28 94 9.2E-21 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS24480 d558dcbfaecb4a28b37ccf6656b9566d 94 SUPERFAMILY SSF52096 26 94 4.04E-19 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS24480 d558dcbfaecb4a28b37ccf6656b9566d 94 PANTHER PTHR11941 20 94 4.5E-22 T 14-09-2016 AMK01_RS24480 d558dcbfaecb4a28b37ccf6656b9566d 94 PANTHER PTHR11941:SF54 20 94 4.5E-22 T 14-09-2016 AMK01_RS16380 8ed5d0aac281397653860590967928c6 95 TIGRFAM TIGR03510 XapX: XapX domain 4 49 1.5E-20 T 14-09-2016 IPR020017 XapX domain AMK01_RS16380 8ed5d0aac281397653860590967928c6 95 Pfam PF07235 Protein of unknown function (DUF1427) 2 79 6.5E-39 T 14-09-2016 IPR009872 Protein of unknown function DUF1427 AMK01_RS02830 08f9a794fc35dbd12db6a902da0a6b8c 137 SUPERFAMILY SSF158682 4 128 2.88E-11 T 14-09-2016 IPR029024 TerB-like AMK01_RS02830 08f9a794fc35dbd12db6a902da0a6b8c 137 Gene3D G3DSA:1.10.3680.10 7 131 4.4E-5 T 14-09-2016 IPR029024 TerB-like AMK01_RS20955 6b6a77e0b7dfbcd7ec7d569bf9084e5b 398 Pfam PF04748 Divergent polysaccharide deacetylase 178 391 6.3E-63 T 14-09-2016 IPR006837 Protein of unknown function DUF610, YibQ AMK01_RS20955 6b6a77e0b7dfbcd7ec7d569bf9084e5b 398 SUPERFAMILY SSF88713 175 391 7.11E-60 T 14-09-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK01_RS20955 6b6a77e0b7dfbcd7ec7d569bf9084e5b 398 PANTHER PTHR30105 46 397 9.1E-39 T 14-09-2016 AMK01_RS20955 6b6a77e0b7dfbcd7ec7d569bf9084e5b 398 Gene3D G3DSA:3.20.20.370 160 396 1.3E-72 T 14-09-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK01_RS07120 af3f26c999cbf29343f35d78897938d7 331 Pfam PF00248 Aldo/keto reductase family 22 327 5.1E-56 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS07120 af3f26c999cbf29343f35d78897938d7 331 SUPERFAMILY SSF51430 10 328 7.07E-69 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS07120 af3f26c999cbf29343f35d78897938d7 331 Gene3D G3DSA:3.20.20.100 14 328 1.7E-65 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS07120 af3f26c999cbf29343f35d78897938d7 331 PANTHER PTHR11732 7 328 1.3E-74 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS09880 add3e9c47d189d547ea80bd1443e1efa 224 SUPERFAMILY SSF51182 3 119 2.41E-35 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS09880 add3e9c47d189d547ea80bd1443e1efa 224 Gene3D G3DSA:2.60.120.10 17 120 5.8E-44 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS09880 add3e9c47d189d547ea80bd1443e1efa 224 SUPERFAMILY SSF51182 134 211 2.55E-9 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS09880 add3e9c47d189d547ea80bd1443e1efa 224 Pfam PF12973 ChrR Cupin-like domain 19 109 3.5E-40 T 14-09-2016 IPR025979 ChrR-like cupin domain AMK01_RS14500 d5bda16a21db2cf0edc7e09a26f6f276 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 95 8.3E-13 T 14-09-2016 IPR008407 Branched-chain amino acid transport, AzlD AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 Gene3D G3DSA:1.10.3850.10 2 212 7.2E-43 T 14-09-2016 AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 Pfam PF00873 AcrB/AcrD/AcrF family 2 219 7.5E-31 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 SUPERFAMILY SSF82866 20 214 2.75E-35 T 14-09-2016 AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 PANTHER PTHR32063 2 236 8.3E-91 T 14-09-2016 AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 PANTHER PTHR32063:SF18 2 236 8.3E-91 T 14-09-2016 AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 PRINTS PR00702 Acriflavin resistance protein family signature 110 134 4.5E-12 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 PRINTS PR00702 Acriflavin resistance protein family signature 163 186 4.5E-12 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 PRINTS PR00702 Acriflavin resistance protein family signature 56 79 4.5E-12 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS29705 b2df8ccee0583e4e3fec8127f2afdf1c 238 PRINTS PR00702 Acriflavin resistance protein family signature 188 211 4.5E-12 T 14-09-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK01_RS11040 51f7f4c56451219e8ac0e4be98b1c901 202 PANTHER PTHR30060 1 193 7.5E-46 T 14-09-2016 AMK01_RS11040 51f7f4c56451219e8ac0e4be98b1c901 202 Pfam PF03741 Integral membrane protein TerC family 14 191 6.4E-43 T 14-09-2016 IPR005496 Integral membrane protein TerC GO:0016021 AMK01_RS11040 51f7f4c56451219e8ac0e4be98b1c901 202 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 11 192 1.6E-66 T 14-09-2016 IPR022301 Integral membrane protein YjbE AMK01_RS03490 bbd11b5c6c1d1430204103226945b73d 138 Pfam PF00460 Flagella basal body rod protein 8 32 3.3E-6 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK01_RS03490 bbd11b5c6c1d1430204103226945b73d 138 PANTHER PTHR30435 7 136 9.0E-46 T 14-09-2016 AMK01_RS03490 bbd11b5c6c1d1430204103226945b73d 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 134 3.0E-8 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK01_RS03490 bbd11b5c6c1d1430204103226945b73d 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 14-09-2016 IPR019776 Flagellar basal body rod protein, conserved site AMK01_RS03490 bbd11b5c6c1d1430204103226945b73d 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 136 2.2E-44 T 14-09-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AMK01_RS03490 bbd11b5c6c1d1430204103226945b73d 138 PANTHER PTHR30435:SF2 7 136 9.0E-46 T 14-09-2016 AMK01_RS15190 81c5676a94fa0feea44c849b7a4cbd9c 352 Gene3D G3DSA:3.40.50.2000 135 324 4.1E-29 T 14-09-2016 AMK01_RS15190 81c5676a94fa0feea44c849b7a4cbd9c 352 SUPERFAMILY SSF53756 13 349 2.39E-62 T 14-09-2016 AMK01_RS15190 81c5676a94fa0feea44c849b7a4cbd9c 352 PANTHER PTHR12526 58 348 3.6E-45 T 14-09-2016 AMK01_RS15190 81c5676a94fa0feea44c849b7a4cbd9c 352 Pfam PF00534 Glycosyl transferases group 1 164 322 2.4E-38 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS00145 020055c6056372169e1b45213f9462d5 243 PANTHER PTHR22572:SF15 5 236 9.7E-44 T 14-09-2016 AMK01_RS00145 020055c6056372169e1b45213f9462d5 243 Gene3D G3DSA:3.90.550.10 2 238 1.2E-48 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS00145 020055c6056372169e1b45213f9462d5 243 PANTHER PTHR22572 5 236 9.7E-44 T 14-09-2016 AMK01_RS00145 020055c6056372169e1b45213f9462d5 243 Pfam PF12804 MobA-like NTP transferase domain 6 134 2.7E-17 T 14-09-2016 IPR025877 MobA-like NTP transferase AMK01_RS00145 020055c6056372169e1b45213f9462d5 243 SUPERFAMILY SSF53448 4 236 1.28E-47 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS14400 cff4a3218049e19db71e821f5bbcaf02 344 PANTHER PTHR11732 1 336 5.1E-143 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS14400 cff4a3218049e19db71e821f5bbcaf02 344 SUPERFAMILY SSF51430 1 318 7.73E-99 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS14400 cff4a3218049e19db71e821f5bbcaf02 344 PRINTS PR00069 Aldo-keto reductase signature 112 130 8.5E-5 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS14400 cff4a3218049e19db71e821f5bbcaf02 344 PRINTS PR00069 Aldo-keto reductase signature 143 160 8.5E-5 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS14400 cff4a3218049e19db71e821f5bbcaf02 344 Gene3D G3DSA:3.20.20.100 1 319 2.4E-96 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS14400 cff4a3218049e19db71e821f5bbcaf02 344 PANTHER PTHR11732:SF185 1 336 5.1E-143 T 14-09-2016 AMK01_RS14400 cff4a3218049e19db71e821f5bbcaf02 344 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 143 160 - T 14-09-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMK01_RS14400 cff4a3218049e19db71e821f5bbcaf02 344 Pfam PF00248 Aldo/keto reductase family 16 319 1.3E-69 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS12845 cf00585b4b98bf4c872be17f66ec0dea 215 Pfam PF01914 MarC family integral membrane protein 14 204 1.4E-22 T 14-09-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMK01_RS12845 cf00585b4b98bf4c872be17f66ec0dea 215 PANTHER PTHR33508 4 213 3.6E-19 T 14-09-2016 AMK01_RS02485 4acbcebda7564d622690944063adea3f 166 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 151 5.8E-18 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS02485 4acbcebda7564d622690944063adea3f 166 Gene3D G3DSA:3.30.1330.40 3 158 8.3E-46 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS02485 4acbcebda7564d622690944063adea3f 166 SUPERFAMILY SSF55298 2 158 7.57E-34 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS02485 4acbcebda7564d622690944063adea3f 166 PANTHER PTHR11803:SF2 1 159 1.3E-22 T 14-09-2016 AMK01_RS02485 4acbcebda7564d622690944063adea3f 166 PANTHER PTHR11803 1 159 1.3E-22 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS16105 739be6cb9a81a9a4d8e9dfbdd54a33f0 331 PIRSF PIRSF033905 1 331 3.5E-175 T 14-09-2016 IPR009645 Uncharacterised conserved protein GguC AMK01_RS16105 739be6cb9a81a9a4d8e9dfbdd54a33f0 331 SUPERFAMILY SSF56529 117 318 7.87E-16 T 14-09-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AMK01_RS02570 83ef69170ed7e79b7429df9295ac1a49 468 SUPERFAMILY SSF53756 2 455 4.14E-154 T 14-09-2016 AMK01_RS02570 83ef69170ed7e79b7429df9295ac1a49 468 Gene3D G3DSA:3.40.50.2000 1 240 4.0E-71 T 14-09-2016 AMK01_RS02570 83ef69170ed7e79b7429df9295ac1a49 468 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 455 1.7E-186 T 14-09-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 AMK01_RS02570 83ef69170ed7e79b7429df9295ac1a49 468 PANTHER PTHR10788:SF6 1 455 3.2E-178 T 14-09-2016 AMK01_RS02570 83ef69170ed7e79b7429df9295ac1a49 468 PANTHER PTHR10788 1 455 3.2E-178 T 14-09-2016 AMK01_RS02570 83ef69170ed7e79b7429df9295ac1a49 468 Gene3D G3DSA:3.40.50.2000 241 440 5.1E-77 T 14-09-2016 AMK01_RS02570 83ef69170ed7e79b7429df9295ac1a49 468 Pfam PF00982 Glycosyltransferase family 20 5 455 3.8E-145 T 14-09-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 AMK01_RS10755 de2d92fdf02a408cde83019b208a8198 155 Gene3D G3DSA:3.30.300.20 1 152 3.6E-56 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS10755 de2d92fdf02a408cde83019b208a8198 155 SUPERFAMILY SSF82784 1 150 2.22E-45 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS10755 de2d92fdf02a408cde83019b208a8198 155 Pfam PF02566 OsmC-like protein 52 149 6.3E-15 T 14-09-2016 IPR003718 OsmC/Ohr family AMK01_RS03095 18a1089520d24fd752c573a0157b490c 158 SMART SM00226 14 150 9.6E-8 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK01_RS03095 18a1089520d24fd752c573a0157b490c 158 PANTHER PTHR11717:SF18 16 147 3.5E-20 T 14-09-2016 AMK01_RS03095 18a1089520d24fd752c573a0157b490c 158 SUPERFAMILY SSF52788 16 144 6.8E-29 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK01_RS03095 18a1089520d24fd752c573a0157b490c 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 16 105 4.2E-12 T 14-09-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK01_RS03095 18a1089520d24fd752c573a0157b490c 158 PANTHER PTHR11717 16 147 3.5E-20 T 14-09-2016 AMK01_RS03095 18a1089520d24fd752c573a0157b490c 158 Gene3D G3DSA:3.40.50.270 15 145 1.4E-25 T 14-09-2016 AMK01_RS16045 bf5f0252fae20766e2b381604c52da0d 371 PANTHER PTHR39167 1 368 1.8E-93 T 14-09-2016 AMK01_RS16045 bf5f0252fae20766e2b381604c52da0d 371 Pfam PF08713 DNA alkylation repair enzyme 124 225 2.0E-9 T 14-09-2016 IPR014825 DNA alkylation repair enzyme AMK01_RS16045 bf5f0252fae20766e2b381604c52da0d 371 SUPERFAMILY SSF48371 32 240 1.34E-42 T 14-09-2016 IPR016024 Armadillo-type fold GO:0005488 AMK01_RS16045 bf5f0252fae20766e2b381604c52da0d 371 Gene3D G3DSA:1.25.40.290 135 233 1.0E-6 T 14-09-2016 AMK01_RS07435 429e5edcbe46572ad91e26a75c28ecb9 776 Gene3D G3DSA:2.60.450.10 52 207 1.2E-13 T 14-09-2016 AMK01_RS07435 429e5edcbe46572ad91e26a75c28ecb9 776 Pfam PF04453 Organic solvent tolerance protein 310 690 4.0E-77 T 14-09-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AMK01_RS07435 429e5edcbe46572ad91e26a75c28ecb9 776 PANTHER PTHR30189 47 747 1.8E-43 T 14-09-2016 AMK01_RS07435 429e5edcbe46572ad91e26a75c28ecb9 776 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 22 766 17.711 T 14-09-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AMK01_RS12675 8b5d50be08845803786d706ae1dae239 92 SUPERFAMILY SSF47336 2 60 6.54E-15 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS12675 8b5d50be08845803786d706ae1dae239 92 Gene3D G3DSA:1.10.1200.10 3 91 7.3E-22 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS12675 8b5d50be08845803786d706ae1dae239 92 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-09-2016 IPR006162 Phosphopantetheine attachment site AMK01_RS12675 8b5d50be08845803786d706ae1dae239 92 Pfam PF00550 Phosphopantetheine attachment site 6 58 3.8E-10 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS09035 2375925fb44d235a858eaba773d4a87c 317 Gene3D G3DSA:3.40.50.720 1 305 5.4E-35 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09035 2375925fb44d235a858eaba773d4a87c 317 PANTHER PTHR10366 2 315 4.2E-32 T 14-09-2016 AMK01_RS09035 2375925fb44d235a858eaba773d4a87c 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 217 6.6E-15 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS09035 2375925fb44d235a858eaba773d4a87c 317 SUPERFAMILY SSF51735 1 312 1.57E-45 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS09220 443b213b61e21b5ae305074acc619462 257 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 256 35.047 T 14-09-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMK01_RS09220 443b213b61e21b5ae305074acc619462 257 PANTHER PTHR30457 1 251 6.6E-71 T 14-09-2016 AMK01_RS09220 443b213b61e21b5ae305074acc619462 257 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 239 2.5E-62 T 14-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMK01_RS09220 443b213b61e21b5ae305074acc619462 257 SUPERFAMILY SSF64167 1 250 3.01E-74 T 14-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMK01_RS09220 443b213b61e21b5ae305074acc619462 257 Pfam PF01975 Survival protein SurE 3 185 9.7E-50 T 14-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMK01_RS09220 443b213b61e21b5ae305074acc619462 257 Gene3D G3DSA:3.40.1210.10 1 249 1.5E-76 T 14-09-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 57.218 T 14-09-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 Gene3D G3DSA:3.90.1150.10 253 351 5.3E-29 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 14-09-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 Gene3D G3DSA:3.40.640.10 38 252 2.1E-62 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 SUPERFAMILY SSF53383 4 351 4.92E-82 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 Pfam PF00155 Aminotransferase class I and II 26 347 3.1E-59 T 14-09-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 350 4.3E-92 T 14-09-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 PANTHER PTHR11751:SF398 3 350 8.7E-113 T 14-09-2016 AMK01_RS20590 511ac67503434dc84cb9dc7400748a2b 353 PANTHER PTHR11751 3 350 8.7E-113 T 14-09-2016 AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 PRINTS PR00070 Dihydrofolate reductase signature 31 39 1.6E-14 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 PRINTS PR00070 Dihydrofolate reductase signature 44 55 1.6E-14 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 PRINTS PR00070 Dihydrofolate reductase signature 17 27 1.6E-14 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 PRINTS PR00070 Dihydrofolate reductase signature 101 115 1.6E-14 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 Gene3D G3DSA:3.40.430.10 7 170 7.7E-57 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 SUPERFAMILY SSF53597 8 170 3.93E-55 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 PANTHER PTHR22778 7 171 3.7E-39 T 14-09-2016 AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 Pfam PF00186 Dihydrofolate reductase 7 169 1.8E-53 T 14-09-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 PIRSF PIRSF000194 2 172 6.9E-58 T 14-09-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK01_RS14360 eeab3320dc0ed63522602b2fa9490d3b 172 PANTHER PTHR22778:SF16 7 171 3.7E-39 T 14-09-2016 AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 SUPERFAMILY SSF55781 70 252 4.38E-46 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 SMART SM00346 13 102 4.2E-9 T 14-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 SUPERFAMILY SSF46785 15 84 1.24E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 Pfam PF09339 IclR helix-turn-helix domain 16 66 3.3E-10 T 14-09-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 PANTHER PTHR30136 15 256 7.4E-60 T 14-09-2016 AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 Gene3D G3DSA:1.10.10.10 15 83 8.2E-14 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 Gene3D G3DSA:3.30.450.40 86 256 5.3E-56 T 14-09-2016 IPR029016 GAF domain-like AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 Pfam PF01614 Bacterial transcriptional regulator 130 252 7.8E-32 T 14-09-2016 IPR014757 Transcription regulator IclR, C-terminal AMK01_RS04370 d07ff5788866ed7cacf010f8a1e7934c 264 PANTHER PTHR30136:SF7 15 256 7.4E-60 T 14-09-2016 AMK01_RS11975 9cc3213cf066780c14bdfebd67c44f48 106 PRINTS PR00355 Adrenodoxin signature 59 73 9.3E-9 T 14-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMK01_RS11975 9cc3213cf066780c14bdfebd67c44f48 106 PRINTS PR00355 Adrenodoxin signature 82 90 9.3E-9 T 14-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMK01_RS11975 9cc3213cf066780c14bdfebd67c44f48 106 PRINTS PR00355 Adrenodoxin signature 40 50 9.3E-9 T 14-09-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 AMK01_RS11975 9cc3213cf066780c14bdfebd67c44f48 106 SUPERFAMILY SSF54292 3 104 2.5E-32 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK01_RS11975 9cc3213cf066780c14bdfebd67c44f48 106 Gene3D G3DSA:3.10.20.30 1 102 1.9E-38 T 14-09-2016 IPR012675 Beta-grasp domain AMK01_RS11975 9cc3213cf066780c14bdfebd67c44f48 106 PANTHER PTHR23426 3 103 1.4E-28 T 14-09-2016 AMK01_RS11975 9cc3213cf066780c14bdfebd67c44f48 106 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 14-09-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 AMK01_RS11975 9cc3213cf066780c14bdfebd67c44f48 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 91 1.7E-15 T 14-09-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK01_RS13065 1130bafb5a17c5d2e223ea5c1715c091 442 Pfam PF06904 Extensin-like protein C-terminus 263 441 4.6E-52 T 14-09-2016 IPR009683 Extensin-like, C-terminal AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 PANTHER PTHR11082 14 339 4.7E-124 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 Gene3D G3DSA:1.10.1200.80 262 328 7.6E-12 T 14-09-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 PIRSF PIRSF006621 17 339 4.4E-104 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 20 327 4.5E-104 T 14-09-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 PANTHER PTHR11082:SF25 14 339 4.7E-124 T 14-09-2016 AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 Pfam PF01207 Dihydrouridine synthase (Dus) 30 329 2.8E-111 T 14-09-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 Gene3D G3DSA:3.20.20.70 25 250 5.6E-80 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 110 128 - T 14-09-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK01_RS09860 6e7891df5de8f35c74d723f69da1a3bd 339 SUPERFAMILY SSF51395 27 299 1.71E-83 T 14-09-2016 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 PANTHER PTHR30477:SF1 172 324 1.1E-66 T 14-09-2016 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 PANTHER PTHR30477:SF1 24 132 1.1E-66 T 14-09-2016 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 PANTHER PTHR30477 24 132 1.1E-66 T 14-09-2016 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 Gene3D G3DSA:3.40.50.1980 242 352 5.2E-27 T 14-09-2016 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 PANTHER PTHR30477 172 324 1.1E-66 T 14-09-2016 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 SUPERFAMILY SSF53807 42 351 8.83E-78 T 14-09-2016 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 Pfam PF01297 Zinc-uptake complex component A periplasmic 44 350 6.4E-67 T 14-09-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 Gene3D G3DSA:3.40.50.1980 33 130 2.1E-47 T 14-09-2016 AMK01_RS13905 412d5efae2c257ed140e5bb138970517 354 Gene3D G3DSA:3.40.50.1980 167 241 2.1E-47 T 14-09-2016 AMK01_RS06360 10ff509410e4e5a93cee51c563c98bb0 90 Pfam PF06233 Usg-like family 10 89 2.0E-41 T 14-09-2016 IPR009354 Usg-like UniPathway: UPA00035 AMK01_RS20105 5dfa730a2395676cfd6f4897672f450b 251 SUPERFAMILY SSF52317 15 197 6.71E-38 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS20105 5dfa730a2395676cfd6f4897672f450b 251 Pfam PF00117 Glutamine amidotransferase class-I 55 187 5.1E-14 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS20105 5dfa730a2395676cfd6f4897672f450b 251 PANTHER PTHR11922:SF11 1 195 1.2E-35 T 14-09-2016 AMK01_RS20105 5dfa730a2395676cfd6f4897672f450b 251 PANTHER PTHR11922 1 195 1.2E-35 T 14-09-2016 AMK01_RS20105 5dfa730a2395676cfd6f4897672f450b 251 Gene3D G3DSA:3.40.50.880 12 212 4.8E-47 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS07520 00af06c2f615c9e192d2e85c822c434a 151 Gene3D G3DSA:3.90.1170.40 4 150 8.0E-45 T 14-09-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS07520 00af06c2f615c9e192d2e85c822c434a 151 SUPERFAMILY SSF54690 3 150 9.94E-44 T 14-09-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS07520 00af06c2f615c9e192d2e85c822c434a 151 PANTHER PTHR23404 29 151 3.5E-26 T 14-09-2016 AMK01_RS07520 00af06c2f615c9e192d2e85c822c434a 151 Pfam PF02391 MoaE protein 7 118 3.1E-29 T 14-09-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS07520 00af06c2f615c9e192d2e85c822c434a 151 PANTHER PTHR23404:SF2 29 151 3.5E-26 T 14-09-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 5.5E-25 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 5.5E-25 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 5.5E-25 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 5.5E-25 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 Gene3D G3DSA:3.40.50.620 1 162 9.8E-47 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 57 2.3E-13 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 SUPERFAMILY SSF52374 1 159 8.45E-36 T 14-09-2016 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 161 5.5E-54 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 163 31.887 T 14-09-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 Pfam PF01467 Cytidylyltransferase-like 5 138 5.2E-13 T 14-09-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 PANTHER PTHR21342:SF1 1 161 1.7E-56 T 14-09-2016 AMK01_RS10845 10ebe6f31ce710b8d404dc596bf82719 170 PANTHER PTHR21342 1 161 1.7E-56 T 14-09-2016 AMK01_RS08965 9602b18b86807e2a0bcf2b5f9c054f72 245 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 189 233 3.5E-10 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK01_RS08965 9602b18b86807e2a0bcf2b5f9c054f72 245 SMART SM00863 189 235 2.6E-9 T 14-09-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK01_RS08965 9602b18b86807e2a0bcf2b5f9c054f72 245 PANTHER PTHR11777 7 234 9.7E-49 T 14-09-2016 AMK01_RS08965 9602b18b86807e2a0bcf2b5f9c054f72 245 SUPERFAMILY SSF50447 4 93 8.47E-13 T 14-09-2016 IPR009000 Translation protein, beta-barrel domain AMK01_RS08965 9602b18b86807e2a0bcf2b5f9c054f72 245 SUPERFAMILY SSF55186 97 238 1.96E-28 T 14-09-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMK01_RS08965 9602b18b86807e2a0bcf2b5f9c054f72 245 Pfam PF01411 tRNA synthetases class II (A) 24 96 1.5E-8 T 14-09-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 Pfam PF14559 Tetratricopeptide repeat 162 229 2.6E-14 T 14-09-2016 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 Gene3D G3DSA:1.25.40.10 237 323 3.1E-28 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 PRINTS PR00421 Thioredoxin family signature 65 74 1.0E-5 T 14-09-2016 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 PRINTS PR00421 Thioredoxin family signature 57 65 1.0E-5 T 14-09-2016 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 PRINTS PR00421 Thioredoxin family signature 105 116 1.0E-5 T 14-09-2016 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 SUPERFAMILY SSF48452 159 285 5.36E-11 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 Gene3D G3DSA:1.25.40.10 151 235 4.4E-18 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 PANTHER PTHR10438:SF282 265 286 3.4E-38 T 14-09-2016 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 PANTHER PTHR10438:SF282 39 143 3.4E-38 T 14-09-2016 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 SUPERFAMILY SSF52833 32 143 2.04E-34 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 Gene3D G3DSA:3.40.30.10 26 140 1.4E-33 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 Pfam PF14561 Tetratricopeptide repeat 235 323 8.7E-28 T 14-09-2016 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 ProSitePatterns PS00194 Thioredoxin family active site. 58 76 - T 14-09-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 PANTHER PTHR10438 39 143 3.4E-38 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 TIGRFAM TIGR01068 thioredoxin: thioredoxin 51 139 8.2E-31 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 Pfam PF00085 Thioredoxin 38 139 1.0E-26 T 14-09-2016 IPR013766 Thioredoxin domain GO:0045454 AMK01_RS20435 3ce1315d48a03ae9a7e36a82b8b5991a 324 PANTHER PTHR10438 265 286 3.4E-38 T 14-09-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK01_RS04890 81d7cdffd4b74d5751cf11b61bd756a2 333 Pfam PF02401 LytB protein 12 291 1.3E-81 T 14-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMK01_RS04890 81d7cdffd4b74d5751cf11b61bd756a2 333 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 10 294 6.7E-97 T 14-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMK01_RS04890 81d7cdffd4b74d5751cf11b61bd756a2 333 PANTHER PTHR30426 9 328 1.6E-128 T 14-09-2016 AMK01_RS04890 81d7cdffd4b74d5751cf11b61bd756a2 333 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 9 296 35.397 T 14-09-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 AMK01_RS17010 cb8430d3ed747ea2adbb0bf9254aaa53 83 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 1.4E-30 T 14-09-2016 IPR010696 Protein of unknown function DUF1272 AMK01_RS17010 cb8430d3ed747ea2adbb0bf9254aaa53 83 Gene3D G3DSA:3.30.40.10 7 61 2.0E-4 T 14-09-2016 IPR013083 Zinc finger, RING/FYVE/PHD-type AMK01_RS01695 133c350298b938a8a398b534b8a18541 366 Pfam PF09375 Imelysin 48 332 2.2E-46 T 14-09-2016 AMK01_RS00540 9058747ab2540daa4350642b447c06c0 893 SUPERFAMILY SSF52540 242 336 5.54E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00540 9058747ab2540daa4350642b447c06c0 893 SUPERFAMILY SSF52540 371 529 5.54E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00540 9058747ab2540daa4350642b447c06c0 893 SUPERFAMILY SSF52540 134 191 5.54E-13 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00540 9058747ab2540daa4350642b447c06c0 893 Pfam PF04851 Type III restriction enzyme, res subunit 122 335 6.2E-19 T 14-09-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK01_RS00540 9058747ab2540daa4350642b447c06c0 893 Gene3D G3DSA:3.40.50.300 402 529 1.6E-4 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00540 9058747ab2540daa4350642b447c06c0 893 Gene3D G3DSA:3.40.50.300 92 257 3.0E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS00540 9058747ab2540daa4350642b447c06c0 893 Gene3D G3DSA:3.40.50.300 289 334 3.0E-6 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS09980 2283f9493500f48993e3022b219569ca 687 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 4 181 4.5E-49 T 14-09-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal AMK01_RS09980 2283f9493500f48993e3022b219569ca 687 PANTHER PTHR11365 1 686 3.1E-227 T 14-09-2016 AMK01_RS09980 2283f9493500f48993e3022b219569ca 687 SUPERFAMILY SSF53067 260 355 2.72E-8 T 14-09-2016 AMK01_RS09980 2283f9493500f48993e3022b219569ca 687 SUPERFAMILY SSF53067 3 79 2.72E-8 T 14-09-2016 AMK01_RS09980 2283f9493500f48993e3022b219569ca 687 Pfam PF01968 Hydantoinase/oxoprolinase 202 495 4.2E-81 T 14-09-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 AMK01_RS09980 2283f9493500f48993e3022b219569ca 687 Gene3D G3DSA:3.30.420.40 4 81 3.8E-4 T 14-09-2016 AMK01_RS16475 553b1f1e372482c3f6e877a3232d8018 326 PANTHER PTHR10366 2 316 1.2E-45 T 14-09-2016 AMK01_RS16475 553b1f1e372482c3f6e877a3232d8018 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 251 3.6E-17 T 14-09-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK01_RS16475 553b1f1e372482c3f6e877a3232d8018 326 SUPERFAMILY SSF51735 1 316 1.04E-49 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16475 553b1f1e372482c3f6e877a3232d8018 326 Gene3D G3DSA:3.40.50.720 210 230 1.0E-29 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16475 553b1f1e372482c3f6e877a3232d8018 326 Gene3D G3DSA:3.40.50.720 1 174 1.0E-29 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16475 553b1f1e372482c3f6e877a3232d8018 326 Gene3D G3DSA:3.90.25.10 231 317 1.8E-15 T 14-09-2016 AMK01_RS17105 18a5ffc82cb902d918578ec7022c401a 241 PANTHER PTHR30576 29 232 3.2E-85 T 14-09-2016 AMK01_RS17105 18a5ffc82cb902d918578ec7022c401a 241 Pfam PF02397 Bacterial sugar transferase 47 233 2.4E-54 T 14-09-2016 IPR003362 Bacterial sugar transferase AMK01_RS17105 18a5ffc82cb902d918578ec7022c401a 241 PANTHER PTHR30576:SF0 29 232 3.2E-85 T 14-09-2016 AMK01_RS02090 e7fa8c04136f083356cb9aec3d51bbc5 164 PANTHER PTHR23091 10 164 8.9E-20 T 14-09-2016 AMK01_RS02090 e7fa8c04136f083356cb9aec3d51bbc5 164 Pfam PF00583 Acetyltransferase (GNAT) family 66 137 7.2E-15 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS02090 e7fa8c04136f083356cb9aec3d51bbc5 164 Gene3D G3DSA:3.40.630.30 10 163 1.1E-32 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS02090 e7fa8c04136f083356cb9aec3d51bbc5 164 SUPERFAMILY SSF55729 10 163 2.06E-25 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS23795 b231c90c9cecb0e64fdd272cc2f8b378 177 Gene3D G3DSA:1.25.40.10 6 173 2.0E-26 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS23795 b231c90c9cecb0e64fdd272cc2f8b378 177 PANTHER PTHR23083 20 176 5.5E-23 T 14-09-2016 AMK01_RS23795 b231c90c9cecb0e64fdd272cc2f8b378 177 Pfam PF07721 Tetratricopeptide repeat 156 176 0.17 T 14-09-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 UniPathway: UPA00694 AMK01_RS23795 b231c90c9cecb0e64fdd272cc2f8b378 177 Pfam PF14559 Tetratricopeptide repeat 26 82 7.7E-6 T 14-09-2016 AMK01_RS23795 b231c90c9cecb0e64fdd272cc2f8b378 177 SUPERFAMILY SSF48452 6 176 9.86E-22 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS12240 2faf3a64f38dac7bc5e433804136868e 488 Gene3D G3DSA:3.30.420.40 244 478 8.7E-62 T 14-09-2016 AMK01_RS12240 2faf3a64f38dac7bc5e433804136868e 488 SUPERFAMILY SSF53067 4 245 2.42E-72 T 14-09-2016 AMK01_RS12240 2faf3a64f38dac7bc5e433804136868e 488 Gene3D G3DSA:3.30.420.40 2 242 3.1E-73 T 14-09-2016 AMK01_RS12240 2faf3a64f38dac7bc5e433804136868e 488 PIRSF PIRSF000538 1 486 2.8E-123 T 14-09-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK01_RS12240 2faf3a64f38dac7bc5e433804136868e 488 SUPERFAMILY SSF53067 244 463 1.22E-58 T 14-09-2016 AMK01_RS12240 2faf3a64f38dac7bc5e433804136868e 488 PANTHER PTHR10196 1 478 4.9E-144 T 14-09-2016 AMK01_RS12240 2faf3a64f38dac7bc5e433804136868e 488 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 242 1.1E-62 T 14-09-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMK01_RS12240 2faf3a64f38dac7bc5e433804136868e 488 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 437 4.2E-38 T 14-09-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMK01_RS05505 409d09e44a752c655290137f22c71163 336 Pfam PF12277 Protein of unknown function (DUF3618) 7 51 2.1E-11 T 14-09-2016 IPR022062 Protein of unknown function DUF3618 AMK01_RS14720 6a11b06f223854129d7bd268a435fd8c 223 SUPERFAMILY SSF53335 15 195 7.89E-31 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14720 6a11b06f223854129d7bd268a435fd8c 223 PANTHER PTHR10108 22 196 1.0E-17 T 14-09-2016 AMK01_RS14720 6a11b06f223854129d7bd268a435fd8c 223 Gene3D G3DSA:3.40.50.150 26 195 2.9E-27 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS14720 6a11b06f223854129d7bd268a435fd8c 223 Pfam PF13649 Methyltransferase domain 57 153 6.0E-15 T 14-09-2016 AMK01_RS14150 b742cd2760a42472aaff8dad2bb2fe86 352 PANTHER PTHR10859:SF86 3 337 2.6E-129 T 14-09-2016 AMK01_RS14150 b742cd2760a42472aaff8dad2bb2fe86 352 Pfam PF00535 Glycosyl transferase family 2 8 169 4.4E-31 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS14150 b742cd2760a42472aaff8dad2bb2fe86 352 SUPERFAMILY SSF53448 7 252 4.69E-39 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS14150 b742cd2760a42472aaff8dad2bb2fe86 352 PANTHER PTHR10859 3 337 2.6E-129 T 14-09-2016 AMK01_RS14150 b742cd2760a42472aaff8dad2bb2fe86 352 Gene3D G3DSA:3.90.550.10 3 135 1.1E-24 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16595 714fae6c70130604bb3cda05f1abd5a4 500 PANTHER PTHR30250 1 483 2.8E-64 T 14-09-2016 AMK01_RS16595 714fae6c70130604bb3cda05f1abd5a4 500 PANTHER PTHR30250:SF0 1 483 2.8E-64 T 14-09-2016 AMK01_RS16595 714fae6c70130604bb3cda05f1abd5a4 500 Pfam PF13440 Polysaccharide biosynthesis protein 32 320 8.2E-75 T 14-09-2016 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 PANTHER PTHR11469 6 536 9.8E-290 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 Gene3D G3DSA:3.40.50.10490 284 498 2.6E-128 T 14-09-2016 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 Gene3D G3DSA:3.40.50.10490 5 90 2.6E-128 T 14-09-2016 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 Pfam PF00342 Phosphoglucose isomerase 44 533 3.1E-214 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 38 516 40.915 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 Gene3D G3DSA:3.40.50.10490 91 281 1.8E-80 T 14-09-2016 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 Gene3D G3DSA:1.10.1390.10 499 538 5.5E-19 T 14-09-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 489 506 - T 14-09-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 256 269 - T 14-09-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 457 475 1.2E-54 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 142 161 1.2E-54 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 475 489 1.2E-54 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 252 270 1.2E-54 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 329 350 1.2E-54 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 489 502 1.2E-54 T 14-09-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 PANTHER PTHR11469:SF4 6 536 9.8E-290 T 14-09-2016 AMK01_RS02575 41b73a654a0ffaafdd43e5f6b9cf1c72 541 SUPERFAMILY SSF53697 6 538 2.06E-206 T 14-09-2016 AMK01_RS12630 74d97c0d614f10352c887cc6e1a23806 263 PANTHER PTHR11019:SF126 178 261 2.1E-12 T 14-09-2016 AMK01_RS12630 74d97c0d614f10352c887cc6e1a23806 263 SMART SM00342 169 253 0.0017 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS12630 74d97c0d614f10352c887cc6e1a23806 263 Pfam PF12833 Helix-turn-helix domain 178 251 2.0E-12 T 14-09-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK01_RS12630 74d97c0d614f10352c887cc6e1a23806 263 PANTHER PTHR11019 178 261 2.1E-12 T 14-09-2016 AMK01_RS11345 cbf2bc3b67d32ef787f7fe3551928fed 467 Pfam PF03313 Serine dehydratase alpha chain 196 461 1.6E-103 T 14-09-2016 IPR005130 Serine dehydratase-like, alpha subunit AMK01_RS11345 cbf2bc3b67d32ef787f7fe3551928fed 467 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 4 464 1.3E-190 T 14-09-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AMK01_RS11345 cbf2bc3b67d32ef787f7fe3551928fed 467 PANTHER PTHR30182 1 465 3.9E-211 T 14-09-2016 AMK01_RS11345 cbf2bc3b67d32ef787f7fe3551928fed 467 PANTHER PTHR30182:SF1 1 465 3.9E-211 T 14-09-2016 AMK01_RS11345 cbf2bc3b67d32ef787f7fe3551928fed 467 SUPERFAMILY SSF143548 17 164 4.18E-44 T 14-09-2016 IPR029009 Allosteric substrate binding domain AMK01_RS11345 cbf2bc3b67d32ef787f7fe3551928fed 467 Gene3D G3DSA:3.30.1330.90 11 165 8.9E-51 T 14-09-2016 IPR029009 Allosteric substrate binding domain AMK01_RS11345 cbf2bc3b67d32ef787f7fe3551928fed 467 Pfam PF03315 Serine dehydratase beta chain 4 162 2.9E-54 T 14-09-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AMK01_RS01350 e31bf5eab820b6997cb9b7ae2cdf672a 82 Gene3D G3DSA:1.10.1200.10 10 65 3.4E-7 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS01350 e31bf5eab820b6997cb9b7ae2cdf672a 82 Pfam PF00550 Phosphopantetheine attachment site 33 64 2.2E-5 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS01350 e31bf5eab820b6997cb9b7ae2cdf672a 82 SUPERFAMILY SSF47336 21 73 2.62E-8 T 14-09-2016 IPR009081 Phosphopantetheine binding ACP domain AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 PANTHER PTHR30465:SF0 28 187 2.4E-105 T 14-09-2016 AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 PANTHER PTHR30465 211 354 2.4E-105 T 14-09-2016 AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 PANTHER PTHR30465:SF0 211 354 2.4E-105 T 14-09-2016 AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 PANTHER PTHR30465 28 187 2.4E-105 T 14-09-2016 AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 SUPERFAMILY SSF161098 217 336 2.62E-16 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 SUPERFAMILY SSF161098 113 178 2.62E-16 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 Gene3D G3DSA:1.10.3720.10 113 181 9.0E-21 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 Gene3D G3DSA:1.10.3720.10 220 350 9.0E-21 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20500 720c3d48a2b4a029b36cc63cc551871e 355 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 353 5.4E-43 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS01290 dd87d20ec9cb31977dd51bc429d2300b 548 Pfam PF02706 Chain length determinant protein 105 255 1.0E-12 T 14-09-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AMK01_RS01290 dd87d20ec9cb31977dd51bc429d2300b 548 PANTHER PTHR32309:SF13 81 520 4.1E-47 T 14-09-2016 AMK01_RS01290 dd87d20ec9cb31977dd51bc429d2300b 548 PANTHER PTHR32309 81 520 4.1E-47 T 14-09-2016 AMK01_RS01290 dd87d20ec9cb31977dd51bc429d2300b 548 Pfam PF13807 G-rich domain on putative tyrosine kinase 447 519 9.5E-8 T 14-09-2016 IPR032807 Tyrosine kinase, G-rich domain AMK01_RS00810 9cefe34ac9483dd5ae408c16c3740144 122 PIRSF PIRSF039020 1 122 2.0E-49 T 14-09-2016 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase AMK01_RS00810 9cefe34ac9483dd5ae408c16c3740144 122 Gene3D G3DSA:3.10.180.10 2 120 6.5E-20 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS00810 9cefe34ac9483dd5ae408c16c3740144 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 115 2.6E-7 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS00810 9cefe34ac9483dd5ae408c16c3740144 122 SUPERFAMILY SSF54593 4 121 3.1E-20 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS20160 ae04781be46249eafd7cc7b8786d370f 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 9.8E-12 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS20160 ae04781be46249eafd7cc7b8786d370f 200 Gene3D G3DSA:1.10.357.10 2 163 9.5E-23 T 14-09-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK01_RS20160 ae04781be46249eafd7cc7b8786d370f 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 1.5E-6 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS20160 ae04781be46249eafd7cc7b8786d370f 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.5E-6 T 14-09-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK01_RS20160 ae04781be46249eafd7cc7b8786d370f 200 SUPERFAMILY SSF46689 16 82 5.2E-16 T 14-09-2016 IPR009057 Homeodomain-like GO:0003677 AMK01_RS20160 ae04781be46249eafd7cc7b8786d370f 200 PANTHER PTHR30055 9 141 2.7E-16 T 14-09-2016 AMK01_RS04600 a8eb38c7c5f29115c105d4831c976442 87 Pfam PF06169 Protein of unknown function (DUF982) 10 81 4.8E-25 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS03900 d974ac8f277733ec4dbf96acf8593395 178 SUPERFAMILY SSF48452 65 159 2.85E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS03900 d974ac8f277733ec4dbf96acf8593395 178 Pfam PF13432 Tetratricopeptide repeat 69 127 4.4E-7 T 14-09-2016 AMK01_RS03900 d974ac8f277733ec4dbf96acf8593395 178 Gene3D G3DSA:1.25.40.10 68 171 1.1E-15 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS03900 d974ac8f277733ec4dbf96acf8593395 178 SMART SM00028 94 127 0.0024 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS03900 d974ac8f277733ec4dbf96acf8593395 178 SMART SM00028 128 161 190.0 T 14-09-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK01_RS13370 11ce32952537def997ef6e09c8a3968f 633 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 633 32.638 T 14-09-2016 IPR023051 Potassium uptake protein, low affinity, Kup AMK01_RS13370 11ce32952537def997ef6e09c8a3968f 633 Pfam PF02705 K+ potassium transporter 23 555 1.7E-196 T 14-09-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AMK01_RS13370 11ce32952537def997ef6e09c8a3968f 633 PANTHER PTHR30540:SF36 21 633 2.7E-247 T 14-09-2016 AMK01_RS13370 11ce32952537def997ef6e09c8a3968f 633 PANTHER PTHR30540 21 633 2.7E-247 T 14-09-2016 AMK01_RS04675 5b9483ec5c29ed19818dfdf6ae6859ea 311 SUPERFAMILY SSF52768 1 309 7.19E-101 T 14-09-2016 AMK01_RS04675 5b9483ec5c29ed19818dfdf6ae6859ea 311 PRINTS PR01270 Histone deacetylase superfamily signature 157 172 2.3E-18 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS04675 5b9483ec5c29ed19818dfdf6ae6859ea 311 PRINTS PR01270 Histone deacetylase superfamily signature 238 248 2.3E-18 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS04675 5b9483ec5c29ed19818dfdf6ae6859ea 311 PRINTS PR01270 Histone deacetylase superfamily signature 123 146 2.3E-18 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS04675 5b9483ec5c29ed19818dfdf6ae6859ea 311 PANTHER PTHR10625:SF104 11 309 9.6E-105 T 14-09-2016 AMK01_RS04675 5b9483ec5c29ed19818dfdf6ae6859ea 311 Gene3D G3DSA:3.40.800.20 4 309 4.8E-104 T 14-09-2016 IPR023801 Histone deacetylase domain AMK01_RS04675 5b9483ec5c29ed19818dfdf6ae6859ea 311 Pfam PF00850 Histone deacetylase domain 20 305 9.7E-88 T 14-09-2016 IPR023801 Histone deacetylase domain AMK01_RS04675 5b9483ec5c29ed19818dfdf6ae6859ea 311 PANTHER PTHR10625 11 309 9.6E-105 T 14-09-2016 IPR000286 Histone deacetylase superfamily AMK01_RS09340 49c111fdae56eb1db1c058ed45f69af2 453 Gene3D G3DSA:1.25.40.10 40 229 2.2E-10 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS09340 49c111fdae56eb1db1c058ed45f69af2 453 SUPERFAMILY SSF48452 66 98 3.56E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS09340 49c111fdae56eb1db1c058ed45f69af2 453 SUPERFAMILY SSF48452 151 230 3.56E-8 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS06310 e1b05841f665cab2fb07beb0ee97aead 129 Pfam PF06059 Domain of Unknown Function (DUF930) 29 127 1.1E-36 T 14-09-2016 IPR009273 Protein of unknown function DUF930 AMK01_RS09315 ccb9351e0333cf3bf75f3cd750bd4c2c 140 Pfam PF12680 SnoaL-like domain 11 117 3.2E-6 T 14-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK01_RS09315 ccb9351e0333cf3bf75f3cd750bd4c2c 140 SUPERFAMILY SSF54427 6 132 2.0E-20 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS09315 ccb9351e0333cf3bf75f3cd750bd4c2c 140 Gene3D G3DSA:3.10.450.50 2 133 6.8E-18 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS12065 cfddc2fa10b8f6f493c852074bdf6590 118 Gene3D G3DSA:3.10.180.10 11 114 1.2E-8 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS12065 cfddc2fa10b8f6f493c852074bdf6590 118 SUPERFAMILY SSF54593 11 113 9.2E-12 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS03515 1b1b99c0eabbc07dea24a494f93de491 179 Gene3D G3DSA:1.10.220.30 115 170 1.3E-4 T 14-09-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMK01_RS05115 1843f38bae5346d2566b10af0a4264cd 301 Pfam PF07386 Protein of unknown function (DUF1499) 109 290 2.9E-10 T 14-09-2016 IPR010865 Protein of unknown function DUF1499 AMK01_RS01735 c06c145a5cbf3c4c95b29f51eb3e187a 265 Pfam PF02673 Bacitracin resistance protein BacA 6 254 3.4E-71 T 14-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMK01_RS01735 c06c145a5cbf3c4c95b29f51eb3e187a 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 259 16.647 T 14-09-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMK01_RS01735 c06c145a5cbf3c4c95b29f51eb3e187a 265 PANTHER PTHR30622:SF3 1 265 4.4E-105 T 14-09-2016 AMK01_RS01735 c06c145a5cbf3c4c95b29f51eb3e187a 265 PANTHER PTHR30622 1 265 4.4E-105 T 14-09-2016 AMK01_RS18655 cfbc15fa69593980e5f0b7f0f5d5bacb 250 SUPERFAMILY SSF55729 22 218 1.53E-14 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS18655 cfbc15fa69593980e5f0b7f0f5d5bacb 250 Gene3D G3DSA:3.40.630.30 26 168 1.1E-4 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19330 e89798bad5f08b268f1be6784d7d34c2 142 Pfam PF06676 Protein of unknown function (DUF1178) 1 138 3.8E-50 T 14-09-2016 IPR009562 Protein of unknown function DUF1178 AMK01_RS19330 e89798bad5f08b268f1be6784d7d34c2 142 PIRSF PIRSF032131 1 142 1.2E-62 T 14-09-2016 IPR009562 Protein of unknown function DUF1178 AMK01_RS02120 e361e7054768a126f11cd9f514850421 142 SUPERFAMILY SSF55166 53 139 1.1E-13 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS02120 e361e7054768a126f11cd9f514850421 142 Gene3D G3DSA:3.30.1380.10 57 139 1.6E-10 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS02120 e361e7054768a126f11cd9f514850421 142 Pfam PF08291 Peptidase M15 56 132 1.5E-5 T 14-09-2016 IPR013230 Peptidase M15A, C-terminal MetaCyc: PWY-6470 AMK01_RS18220 c842cff41142da7a7d6f99031028ed0c 67 Pfam PF04325 Protein of unknown function (DUF465) 14 58 3.4E-12 T 14-09-2016 IPR007420 Protein of unknown function DUF465 AMK01_RS06785 aa1e41f7fa8ce96729a49dd356c83b4e 112 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 67 111 7.2E-10 T 14-09-2016 IPR019223 Domain of unknown function DUF2147 AMK01_RS02855 c85b5572422cedd644fbdc369347cccc 117 PANTHER PTHR34129 1 115 1.9E-23 T 14-09-2016 AMK01_RS02855 c85b5572422cedd644fbdc369347cccc 117 Pfam PF06108 Protein of unknown function (DUF952) 10 98 7.2E-29 T 14-09-2016 IPR009297 Protein of unknown function DUF952 AMK01_RS02855 c85b5572422cedd644fbdc369347cccc 117 SUPERFAMILY SSF56399 6 114 1.38E-37 T 14-09-2016 AMK01_RS15065 2f65d202963ab6f0867f841e3c58a070 296 Pfam PF00892 EamA-like transporter family 7 140 2.1E-17 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS15065 2f65d202963ab6f0867f841e3c58a070 296 Pfam PF00892 EamA-like transporter family 151 283 1.2E-20 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS15065 2f65d202963ab6f0867f841e3c58a070 296 SUPERFAMILY SSF103481 191 289 5.1E-12 T 14-09-2016 AMK01_RS15065 2f65d202963ab6f0867f841e3c58a070 296 SUPERFAMILY SSF103481 40 143 8.5E-13 T 14-09-2016 AMK01_RS15065 2f65d202963ab6f0867f841e3c58a070 296 PANTHER PTHR12715 1 280 1.2E-50 T 14-09-2016 AMK01_RS06455 b5a492ed136be7606243d7f2d889ec00 114 Pfam PF07372 Protein of unknown function (DUF1491) 3 107 8.5E-29 T 14-09-2016 IPR009964 Protein of unknown function DUF1491 AMK01_RS13415 c7a1cc034a764953bdc8772695625e52 193 Gene3D G3DSA:3.40.50.1820 4 192 3.6E-14 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS13415 c7a1cc034a764953bdc8772695625e52 193 SUPERFAMILY SSF53474 4 192 1.5E-16 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS13415 c7a1cc034a764953bdc8772695625e52 193 Pfam PF01738 Dienelactone hydrolase family 4 192 7.9E-10 T 14-09-2016 IPR002925 Dienelactone hydrolase GO:0016787 AMK01_RS17920 0012f7cf37354db5711dda156c955852 281 PANTHER PTHR39189 29 280 1.1E-40 T 14-09-2016 AMK01_RS17920 0012f7cf37354db5711dda156c955852 281 Gene3D G3DSA:3.60.15.10 60 236 2.2E-28 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS17920 0012f7cf37354db5711dda156c955852 281 SUPERFAMILY SSF56281 65 242 8.51E-9 T 14-09-2016 IPR001279 Metallo-beta-lactamase AMK01_RS17920 0012f7cf37354db5711dda156c955852 281 Pfam PF13483 Beta-lactamase superfamily domain 67 234 1.3E-46 T 14-09-2016 AMK01_RS24565 f4f4d8e2d22ec3bb332161620f05117a 180 Pfam PF01609 Transposase DDE domain 57 169 2.8E-6 T 14-09-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AMK01_RS15670 0b8b394cab73d54c29607b5c52624a89 336 Pfam PF06904 Extensin-like protein C-terminus 157 335 1.3E-54 T 14-09-2016 IPR009683 Extensin-like, C-terminal AMK01_RS16490 c90006570b43d660b6ccca2fecadbd29 387 SUPERFAMILY SSF56601 33 384 4.3E-86 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS16490 c90006570b43d660b6ccca2fecadbd29 387 Gene3D G3DSA:3.40.710.10 35 384 2.3E-74 T 14-09-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK01_RS16490 c90006570b43d660b6ccca2fecadbd29 387 Pfam PF00144 Beta-lactamase 37 383 1.9E-74 T 14-09-2016 IPR001466 Beta-lactamase-related AMK01_RS16490 c90006570b43d660b6ccca2fecadbd29 387 PANTHER PTHR22935 28 384 1.4E-60 T 14-09-2016 AMK01_RS16490 c90006570b43d660b6ccca2fecadbd29 387 PANTHER PTHR22935:SF64 28 384 1.4E-60 T 14-09-2016 AMK01_RS16490 c90006570b43d660b6ccca2fecadbd29 387 ProSitePatterns PS00336 Beta-lactamase class-C active site. 85 92 - T 14-09-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 AMK01_RS04415 1cbb0461faa24b0b520782f5a71ed1d2 207 Hamap MF_01398 ATP synthase subunit b [atpF]. 49 207 9.443 T 14-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK01_RS04415 1cbb0461faa24b0b520782f5a71ed1d2 207 Pfam PF00430 ATP synthase B/B' CF(0) 58 187 1.5E-17 T 14-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK01_RS15080 487a13d87eb274b06182c8750cd0a5b5 341 Pfam PF06059 Domain of Unknown Function (DUF930) 244 338 1.0E-27 T 14-09-2016 IPR009273 Protein of unknown function DUF930 AMK01_RS15080 487a13d87eb274b06182c8750cd0a5b5 341 SUPERFAMILY SSF101447 74 83 1.26E-6 T 14-09-2016 AMK01_RS13755 b3a3a2f208d6a20a704938d67c4852f6 216 Pfam PF12840 Helix-turn-helix domain 27 81 4.6E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13755 b3a3a2f208d6a20a704938d67c4852f6 216 SUPERFAMILY SSF46785 26 142 8.06E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13755 b3a3a2f208d6a20a704938d67c4852f6 216 SMART SM00418 26 111 5.7E-7 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS13755 b3a3a2f208d6a20a704938d67c4852f6 216 Gene3D G3DSA:1.10.10.10 27 90 5.4E-15 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS07605 4d4e6c22bee6657cb126ac6b5a76a76e 452 Pfam PF13449 Esterase-like activity of phytase 90 423 5.3E-62 T 14-09-2016 IPR027372 Phytase-like domain AMK01_RS07605 4d4e6c22bee6657cb126ac6b5a76a76e 452 PANTHER PTHR37957 1 449 1.1E-122 T 14-09-2016 AMK01_RS28440 9c48bb9c8a6c46b4f346bba78c35b719 166 SUPERFAMILY SSF52317 1 140 2.96E-32 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS28440 9c48bb9c8a6c46b4f346bba78c35b719 166 PANTHER PTHR11922 1 122 9.4E-37 T 14-09-2016 AMK01_RS28440 9c48bb9c8a6c46b4f346bba78c35b719 166 PANTHER PTHR11922:SF11 1 122 9.4E-37 T 14-09-2016 AMK01_RS28440 9c48bb9c8a6c46b4f346bba78c35b719 166 Gene3D G3DSA:3.40.50.880 2 165 4.9E-36 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS28440 9c48bb9c8a6c46b4f346bba78c35b719 166 Pfam PF00117 Glutamine amidotransferase class-I 7 117 4.0E-10 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS12035 2fbd9a0e10bd4fc52d1c2d0ed6fc41fe 280 PANTHER PTHR34990 4 280 2.4E-131 T 14-09-2016 AMK01_RS12035 2fbd9a0e10bd4fc52d1c2d0ed6fc41fe 280 PANTHER PTHR34990:SF2 4 280 2.4E-131 T 14-09-2016 AMK01_RS12035 2fbd9a0e10bd4fc52d1c2d0ed6fc41fe 280 Gene3D G3DSA:3.60.21.10 198 253 3.5E-36 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS12035 2fbd9a0e10bd4fc52d1c2d0ed6fc41fe 280 Gene3D G3DSA:3.60.21.10 18 136 3.5E-36 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS12035 2fbd9a0e10bd4fc52d1c2d0ed6fc41fe 280 SUPERFAMILY SSF56300 15 262 4.62E-36 T 14-09-2016 IPR029052 Metallo-dependent phosphatase-like AMK01_RS12035 2fbd9a0e10bd4fc52d1c2d0ed6fc41fe 280 Pfam PF00149 Calcineurin-like phosphoesterase 17 217 7.7E-12 T 14-09-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 333 467 4.8E-7 T 14-09-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 Pfam PF13440 Polysaccharide biosynthesis protein 30 327 1.8E-11 T 14-09-2016 AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 SUPERFAMILY SSF53474 1032 1099 8.11E-24 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 SUPERFAMILY SSF53474 818 951 8.11E-24 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 SUPERFAMILY SSF53474 722 783 9.31E-17 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 SUPERFAMILY SSF53474 541 666 9.31E-17 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 Gene3D G3DSA:3.40.50.1820 703 784 1.4E-13 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 Gene3D G3DSA:3.40.50.1820 540 664 1.4E-13 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 Gene3D G3DSA:3.40.50.1820 800 948 1.8E-22 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS20785 c346baecbba57947aa58e01c177b6899 1103 Gene3D G3DSA:3.40.50.1820 1030 1099 1.8E-22 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS18275 f07cebda1a12d4def54e5370ba6e47a6 210 PANTHER PTHR30086 1 210 8.2E-42 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS18275 f07cebda1a12d4def54e5370ba6e47a6 210 PIRSF PIRSF006324 1 207 1.1E-49 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS18275 f07cebda1a12d4def54e5370ba6e47a6 210 Pfam PF01810 LysE type translocator 15 204 7.5E-32 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS17200 3cae22e44593bf58e1f863f9d284137c 305 SUPERFAMILY SSF103481 40 141 2.48E-10 T 14-09-2016 AMK01_RS17200 3cae22e44593bf58e1f863f9d284137c 305 SUPERFAMILY SSF103481 193 291 9.42E-12 T 14-09-2016 AMK01_RS17200 3cae22e44593bf58e1f863f9d284137c 305 Pfam PF00892 EamA-like transporter family 154 286 1.6E-19 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS17200 3cae22e44593bf58e1f863f9d284137c 305 Pfam PF00892 EamA-like transporter family 5 137 1.9E-17 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS17200 3cae22e44593bf58e1f863f9d284137c 305 PANTHER PTHR12715 2 289 1.5E-60 T 14-09-2016 AMK01_RS17200 3cae22e44593bf58e1f863f9d284137c 305 PANTHER PTHR12715:SF12 2 289 1.5E-60 T 14-09-2016 AMK01_RS18110 ceea3b1de535e83ad9fcaa3708b24ca0 330 PIRSF PIRSF017082 2 329 1.1E-85 T 14-09-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK01_RS18110 ceea3b1de535e83ad9fcaa3708b24ca0 330 SUPERFAMILY SSF53850 117 295 6.51E-12 T 14-09-2016 AMK01_RS18110 ceea3b1de535e83ad9fcaa3708b24ca0 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 326 2.9E-94 T 14-09-2016 IPR005064 Bordetella uptake gene GO:0030288 AMK01_RS18110 ceea3b1de535e83ad9fcaa3708b24ca0 330 PANTHER PTHR30349 1 300 1.5E-109 T 14-09-2016 AMK01_RS18110 ceea3b1de535e83ad9fcaa3708b24ca0 330 PANTHER PTHR30349:SF16 1 300 1.5E-109 T 14-09-2016 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 PRINTS PR00313 NodO calcium binding signature 508 516 8.6E-9 T 14-09-2016 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 PRINTS PR00313 NodO calcium binding signature 535 543 8.6E-9 T 14-09-2016 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 PRINTS PR00313 NodO calcium binding signature 496 507 8.6E-9 T 14-09-2016 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 PRINTS PR00313 NodO calcium binding signature 544 553 8.6E-9 T 14-09-2016 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 Gene3D G3DSA:2.150.10.10 488 616 4.2E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 Gene3D G3DSA:2.150.10.10 372 373 4.2E-13 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 304 390 1.9E-25 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 191 283 2.1E-26 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 119 170 3.8E-4 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 SUPERFAMILY SSF51120 482 613 1.83E-9 T 14-09-2016 IPR011049 Serralysin-like metalloprotease, C-terminal AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 499 520 1.5E-6 T 14-09-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 183 204 1.5E-6 T 14-09-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 534 551 0.09 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 498 514 0.0058 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS13525 949b423f58eed886d67df6a92345d2a1 695 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 516 533 0.018 T 14-09-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AMK01_RS04390 28e952cf07509ccc8f034508149cc524 633 PANTHER PTHR30540:SF36 19 633 8.6E-287 T 14-09-2016 AMK01_RS04390 28e952cf07509ccc8f034508149cc524 633 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 633 33.055 T 14-09-2016 IPR023051 Potassium uptake protein, low affinity, Kup AMK01_RS04390 28e952cf07509ccc8f034508149cc524 633 Pfam PF02705 K+ potassium transporter 23 555 8.3E-205 T 14-09-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AMK01_RS04390 28e952cf07509ccc8f034508149cc524 633 PANTHER PTHR30540 19 633 8.6E-287 T 14-09-2016 AMK01_RS12015 10ba5d745c7233cc9c47bcbf393660f0 281 Gene3D G3DSA:3.40.50.300 16 249 2.4E-66 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS12015 10ba5d745c7233cc9c47bcbf393660f0 281 PANTHER PTHR24220 22 261 5.2E-130 T 14-09-2016 AMK01_RS12015 10ba5d745c7233cc9c47bcbf393660f0 281 PANTHER PTHR24220:SF483 22 261 5.2E-130 T 14-09-2016 AMK01_RS12015 10ba5d745c7233cc9c47bcbf393660f0 281 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-09-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK01_RS12015 10ba5d745c7233cc9c47bcbf393660f0 281 SMART SM00382 45 234 3.7E-14 T 14-09-2016 IPR003593 AAA+ ATPase domain AMK01_RS12015 10ba5d745c7233cc9c47bcbf393660f0 281 Pfam PF00005 ABC transporter 36 186 2.1E-28 T 14-09-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK01_RS12015 10ba5d745c7233cc9c47bcbf393660f0 281 SUPERFAMILY SSF52540 19 248 1.04E-60 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14780 ec4662441ca5ea5a12cc2243bf7ee86c 114 Pfam PF01042 Endoribonuclease L-PSP 5 112 1.3E-20 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS14780 ec4662441ca5ea5a12cc2243bf7ee86c 114 PANTHER PTHR11803 10 113 2.0E-23 T 14-09-2016 IPR006175 YjgF/YER057c/UK114 family AMK01_RS14780 ec4662441ca5ea5a12cc2243bf7ee86c 114 Gene3D G3DSA:3.30.1330.40 11 112 3.4E-21 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS14780 ec4662441ca5ea5a12cc2243bf7ee86c 114 SUPERFAMILY SSF55298 10 113 6.91E-27 T 14-09-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK01_RS20130 4dc1bda33d60dd9ea05e6b48ea493f0d 168 PANTHER PTHR23091 4 144 1.5E-15 T 14-09-2016 AMK01_RS20130 4dc1bda33d60dd9ea05e6b48ea493f0d 168 PANTHER PTHR23091:SF258 4 144 1.5E-15 T 14-09-2016 AMK01_RS20130 4dc1bda33d60dd9ea05e6b48ea493f0d 168 Pfam PF00583 Acetyltransferase (GNAT) family 67 144 2.6E-12 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS20130 4dc1bda33d60dd9ea05e6b48ea493f0d 168 SUPERFAMILY SSF55729 6 146 2.06E-26 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS20130 4dc1bda33d60dd9ea05e6b48ea493f0d 168 Gene3D G3DSA:3.40.630.30 5 167 4.4E-43 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS10375 c493b4e08b6e540177c15c595603ebaf 468 PANTHER PTHR11920 271 467 1.5E-17 T 14-09-2016 AMK01_RS10375 c493b4e08b6e540177c15c595603ebaf 468 PANTHER PTHR11920:SF341 271 467 1.5E-17 T 14-09-2016 AMK01_RS10375 c493b4e08b6e540177c15c595603ebaf 468 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 296 436 1.3E-24 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS10375 c493b4e08b6e540177c15c595603ebaf 468 SUPERFAMILY SSF55073 296 467 4.24E-43 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS10375 c493b4e08b6e540177c15c595603ebaf 468 Gene3D G3DSA:3.30.70.1230 296 466 1.3E-33 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS10375 c493b4e08b6e540177c15c595603ebaf 468 SMART SM00044 251 450 3.5E-13 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS00840 d969e962858d9a9ebf735ced5cf008f5 179 Pfam PF06347 Bacterial SH3 domain 46 102 7.0E-23 T 14-09-2016 IPR010466 Protein of unknown function DUF1058 AMK01_RS00840 d969e962858d9a9ebf735ced5cf008f5 179 Pfam PF06347 Bacterial SH3 domain 117 171 6.2E-20 T 14-09-2016 IPR010466 Protein of unknown function DUF1058 AMK01_RS00840 d969e962858d9a9ebf735ced5cf008f5 179 SMART SM00287 40 103 9.4E-4 T 14-09-2016 IPR003646 SH3-like domain, bacterial-type AMK01_RS00840 d969e962858d9a9ebf735ced5cf008f5 179 SMART SM00287 115 173 1.1 T 14-09-2016 IPR003646 SH3-like domain, bacterial-type AMK01_RS00725 54d101cf147ffc4d6b09a7bd909a1582 134 PANTHER PTHR33515 8 119 2.0E-28 T 14-09-2016 AMK01_RS00725 54d101cf147ffc4d6b09a7bd909a1582 134 SUPERFAMILY SSF89919 8 120 2.62E-28 T 14-09-2016 IPR023799 Ribosome-binding factor A domain AMK01_RS00725 54d101cf147ffc4d6b09a7bd909a1582 134 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 11 120 6.1E-15 T 14-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK01_RS00725 54d101cf147ffc4d6b09a7bd909a1582 134 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 102 2.0E-40 T 14-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK01_RS00725 54d101cf147ffc4d6b09a7bd909a1582 134 Gene3D G3DSA:3.30.300.20 9 125 7.3E-29 T 14-09-2016 IPR015946 K homology domain-like, alpha/beta AMK01_RS00725 54d101cf147ffc4d6b09a7bd909a1582 134 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 8 125 19.499 T 14-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK01_RS00725 54d101cf147ffc4d6b09a7bd909a1582 134 ProSitePatterns PS01319 Ribosome-binding factor A signature. 83 105 - T 14-09-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AMK01_RS00725 54d101cf147ffc4d6b09a7bd909a1582 134 Pfam PF02033 Ribosome-binding factor A 12 118 2.4E-24 T 14-09-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 Pfam PF00067 Cytochrome P450 53 451 8.1E-71 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00385 P450 superfamily signature 412 423 8.5E-13 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00385 P450 superfamily signature 323 334 8.5E-13 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00385 P450 superfamily signature 271 288 8.5E-13 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00385 P450 superfamily signature 403 412 8.5E-13 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 405 414 - T 14-09-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 Gene3D G3DSA:1.10.630.10 45 464 3.8E-100 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 SUPERFAMILY SSF48264 10 464 2.62E-93 T 14-09-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00463 E-class P450 group I signature 412 435 9.8E-21 T 14-09-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00463 E-class P450 group I signature 280 306 9.8E-21 T 14-09-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00463 E-class P450 group I signature 367 391 9.8E-21 T 14-09-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00463 E-class P450 group I signature 402 412 9.8E-21 T 14-09-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PRINTS PR00463 E-class P450 group I signature 260 277 9.8E-21 T 14-09-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMK01_RS00265 58ca54293bd7ce957e2f20ac23e20fc8 470 PANTHER PTHR24305 51 465 2.2E-86 T 14-09-2016 AMK01_RS18975 afbd0c9a9937c949cf8570160f1f01fa 165 Pfam PF10003 Integral membrane protein (DUF2244) 19 158 1.1E-43 T 14-09-2016 IPR019253 Protein of unknown function DUF2244, transmembrane AMK01_RS18975 afbd0c9a9937c949cf8570160f1f01fa 165 PIRSF PIRSF032162 1 165 2.2E-63 T 14-09-2016 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane AMK01_RS29515 8e75d4703d5b2af876cdf7329792267b 115 SUPERFAMILY SSF110395 1 114 5.62E-20 T 14-09-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 AMK01_RS29515 8e75d4703d5b2af876cdf7329792267b 115 Gene3D G3DSA:3.20.20.380 1 114 4.0E-29 T 14-09-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 AMK01_RS29515 8e75d4703d5b2af876cdf7329792267b 115 PANTHER PTHR12598 1 115 5.9E-29 T 14-09-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 AMK01_RS29515 8e75d4703d5b2af876cdf7329792267b 115 PANTHER PTHR12598:SF0 1 115 5.9E-29 T 14-09-2016 AMK01_RS29515 8e75d4703d5b2af876cdf7329792267b 115 Pfam PF03932 CutC family 1 78 4.1E-24 T 14-09-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 AMK01_RS18710 9552b1d2981df64b7958c6d476969bd7 329 SMART SM00320 198 236 71.0 T 14-09-2016 IPR001680 WD40 repeat GO:0005515 AMK01_RS18710 9552b1d2981df64b7958c6d476969bd7 329 SMART SM00320 286 326 6.7 T 14-09-2016 IPR001680 WD40 repeat GO:0005515 AMK01_RS18710 9552b1d2981df64b7958c6d476969bd7 329 SMART SM00320 155 191 28.0 T 14-09-2016 IPR001680 WD40 repeat GO:0005515 AMK01_RS18710 9552b1d2981df64b7958c6d476969bd7 329 SMART SM00320 74 114 380.0 T 14-09-2016 IPR001680 WD40 repeat GO:0005515 AMK01_RS18710 9552b1d2981df64b7958c6d476969bd7 329 Pfam PF12894 Anaphase-promoting complex subunit 4 WD40 domain 263 327 6.9E-6 T 14-09-2016 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain AMK01_RS18710 9552b1d2981df64b7958c6d476969bd7 329 Gene3D G3DSA:2.120.10.30 27 112 4.6E-6 T 14-09-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK01_RS18710 9552b1d2981df64b7958c6d476969bd7 329 Gene3D G3DSA:2.130.10.10 124 327 2.1E-21 T 14-09-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK01_RS18710 9552b1d2981df64b7958c6d476969bd7 329 SUPERFAMILY SSF50998 14 327 2.43E-27 T 14-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMK01_RS25545 42ab6db7bc3fe09537c326aa6de039ef 187 PANTHER PTHR11271 9 187 7.6E-46 T 14-09-2016 AMK01_RS25545 42ab6db7bc3fe09537c326aa6de039ef 187 SUPERFAMILY SSF51556 40 186 1.56E-6 T 14-09-2016 IPR032466 Metal-dependent hydrolase AMK01_RS25545 42ab6db7bc3fe09537c326aa6de039ef 187 PANTHER PTHR11271:SF43 9 187 7.6E-46 T 14-09-2016 AMK01_RS03305 bf8e5f0b8b26e2c9c55cf8c4e495c2f9 301 SUPERFAMILY SSF103481 49 151 1.44E-10 T 14-09-2016 AMK01_RS03305 bf8e5f0b8b26e2c9c55cf8c4e495c2f9 301 Pfam PF00892 EamA-like transporter family 22 148 5.5E-12 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS03305 bf8e5f0b8b26e2c9c55cf8c4e495c2f9 301 Pfam PF00892 EamA-like transporter family 161 294 1.1E-18 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS03305 bf8e5f0b8b26e2c9c55cf8c4e495c2f9 301 PANTHER PTHR22911 1 293 1.6E-40 T 14-09-2016 AMK01_RS03305 bf8e5f0b8b26e2c9c55cf8c4e495c2f9 301 SUPERFAMILY SSF103481 197 296 5.75E-13 T 14-09-2016 AMK01_RS23925 ef813c672680f74cb22db942900d5c91 242 PANTHER PTHR11922:SF11 1 202 6.7E-45 T 14-09-2016 AMK01_RS23925 ef813c672680f74cb22db942900d5c91 242 Gene3D G3DSA:3.40.50.880 14 235 2.3E-47 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS23925 ef813c672680f74cb22db942900d5c91 242 SUPERFAMILY SSF52317 14 219 2.15E-43 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS23925 ef813c672680f74cb22db942900d5c91 242 PANTHER PTHR11922 1 202 6.7E-45 T 14-09-2016 AMK01_RS23925 ef813c672680f74cb22db942900d5c91 242 Pfam PF00117 Glutamine amidotransferase class-I 80 197 2.2E-10 T 14-09-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK01_RS14870 39e2e50c5fa45a9de77745c5c927488d 315 PANTHER PTHR30193 18 314 1.7E-70 T 14-09-2016 AMK01_RS14870 39e2e50c5fa45a9de77745c5c927488d 315 PANTHER PTHR30193:SF6 18 314 1.7E-70 T 14-09-2016 AMK01_RS14870 39e2e50c5fa45a9de77745c5c927488d 315 Gene3D G3DSA:1.10.3720.10 76 309 1.5E-51 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14870 39e2e50c5fa45a9de77745c5c927488d 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 311 1.5E-14 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS14870 39e2e50c5fa45a9de77745c5c927488d 315 SUPERFAMILY SSF161098 61 297 4.06E-51 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20185 66413d7d2aa0754c0e2ec07f3fbcb5a7 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 258 1.1E-31 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS20185 66413d7d2aa0754c0e2ec07f3fbcb5a7 292 PANTHER PTHR32196 1 288 5.0E-114 T 14-09-2016 AMK01_RS20185 66413d7d2aa0754c0e2ec07f3fbcb5a7 292 PANTHER PTHR32196:SF27 1 288 5.0E-114 T 14-09-2016 AMK01_RS15140 b120e07d702163b2a4a8295dd654e39c 106 Gene3D G3DSA:3.30.70.900 6 80 2.2E-10 T 14-09-2016 AMK01_RS15140 b120e07d702163b2a4a8295dd654e39c 106 SUPERFAMILY SSF54909 5 82 2.98E-10 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS07575 07d5f3289f3caf82c9a30f72aefad0f4 223 PANTHER PTHR10520 1 198 2.7E-98 T 14-09-2016 AMK01_RS07575 07d5f3289f3caf82c9a30f72aefad0f4 223 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 7 192 30.724 T 14-09-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 AMK01_RS07575 07d5f3289f3caf82c9a30f72aefad0f4 223 Pfam PF00551 Formyl transferase 6 186 2.9E-58 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS07575 07d5f3289f3caf82c9a30f72aefad0f4 223 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 7 196 5.9E-68 T 14-09-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 AMK01_RS07575 07d5f3289f3caf82c9a30f72aefad0f4 223 Gene3D G3DSA:3.40.50.170 6 206 3.1E-67 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS07575 07d5f3289f3caf82c9a30f72aefad0f4 223 SUPERFAMILY SSF53328 6 202 4.45E-63 T 14-09-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS07575 07d5f3289f3caf82c9a30f72aefad0f4 223 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 138 161 - T 14-09-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK01_RS13960 3c8724a14d1bf00755a763b1d337af46 256 SUPERFAMILY SSF55811 108 251 8.67E-9 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS13960 3c8724a14d1bf00755a763b1d337af46 256 Gene3D G3DSA:3.90.79.10 116 246 5.4E-7 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS18785 ec8b4aa95aa9ea107cdd24ca98a206ad 302 SMART SM00880 15 278 1.2E-30 T 14-09-2016 IPR007899 CHAD domain AMK01_RS18785 ec8b4aa95aa9ea107cdd24ca98a206ad 302 Pfam PF05235 CHAD domain 35 243 1.0E-26 T 14-09-2016 IPR007899 CHAD domain AMK01_RS17500 96d1b9f7dd024c803e67fe33a022dc9d 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 119 3.4E-35 T 14-09-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AMK01_RS17500 96d1b9f7dd024c803e67fe33a022dc9d 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 120 19.491 T 14-09-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AMK01_RS17500 96d1b9f7dd024c803e67fe33a022dc9d 121 PANTHER PTHR11058 2 120 8.4E-42 T 14-09-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 AMK01_RS17500 96d1b9f7dd024c803e67fe33a022dc9d 121 PANTHER PTHR11058:SF5 2 120 8.4E-42 T 14-09-2016 AMK01_RS03180 f3b017408fa5ed38ed813b9dcb525eec 105 PIRSF PIRSF031780 1 104 4.0E-20 T 14-09-2016 IPR009945 Protein of unknown function DUF1476 AMK01_RS03180 f3b017408fa5ed38ed813b9dcb525eec 105 Pfam PF07345 Domain of unknown function (DUF1476) 1 99 8.1E-29 T 14-09-2016 IPR009945 Protein of unknown function DUF1476 AMK01_RS18040 82b199e56d3f5fa81a8e3d81dda84cf8 125 Pfam PF05164 Cell division protein ZapA 4 97 1.3E-21 T 14-09-2016 IPR007838 Cell division protein ZapA-like AMK01_RS18040 82b199e56d3f5fa81a8e3d81dda84cf8 125 SUPERFAMILY SSF102829 3 88 5.89E-22 T 14-09-2016 IPR007838 Cell division protein ZapA-like AMK01_RS13575 65e500527f1a4c3bde375ee35ec5ecbf 277 Gene3D G3DSA:3.20.20.150 19 164 1.6E-9 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS13575 65e500527f1a4c3bde375ee35ec5ecbf 277 SUPERFAMILY SSF51658 10 188 1.06E-12 T 14-09-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK01_RS11625 8677b9866584d019eb78d70c8ea6386d 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 201 3.5E-81 T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK01_RS11625 8677b9866584d019eb78d70c8ea6386d 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK01_RS11625 8677b9866584d019eb78d70c8ea6386d 225 Gene3D G3DSA:3.20.20.70 4 223 2.0E-90 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS11625 8677b9866584d019eb78d70c8ea6386d 225 SUPERFAMILY SSF51366 5 217 1.83E-73 T 14-09-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK01_RS11625 8677b9866584d019eb78d70c8ea6386d 225 PIRSF PIRSF001461 1 225 7.5E-90 T 14-09-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK01_RS11625 8677b9866584d019eb78d70c8ea6386d 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 204 1.5E-86 T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK01_RS11625 8677b9866584d019eb78d70c8ea6386d 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK01_RS11625 8677b9866584d019eb78d70c8ea6386d 225 PANTHER PTHR11749 3 224 4.2E-117 T 14-09-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK01_RS07460 db6ef7c5464748e8f10a4adba981e97f 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 1.4E-36 T 14-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMK01_RS07460 db6ef7c5464748e8f10a4adba981e97f 149 SUPERFAMILY SSF102400 1 139 1.22E-43 T 14-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMK01_RS07460 db6ef7c5464748e8f10a4adba981e97f 149 Gene3D G3DSA:3.40.50.10110 1 139 7.2E-41 T 14-09-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMK01_RS04915 e9dcafc2c3735d80d71be45fa05cea24 63 SUPERFAMILY SSF69047 5 61 3.27E-12 T 14-09-2016 IPR008462 CsbD-like AMK01_RS04915 e9dcafc2c3735d80d71be45fa05cea24 63 Gene3D G3DSA:1.10.1470.10 4 62 1.4E-16 T 14-09-2016 IPR008462 CsbD-like AMK01_RS04915 e9dcafc2c3735d80d71be45fa05cea24 63 Pfam PF05532 CsbD-like 6 57 9.0E-17 T 14-09-2016 IPR008462 CsbD-like AMK01_RS18095 0ae6f71a78127fe460e32f18bad7a494 171 Pfam PF07323 Protein of unknown function (DUF1465) 14 168 5.1E-61 T 14-09-2016 IPR010848 Protein of unknown function DUF1465 AMK01_RS07065 95b6296aa8b9b709b49811bf717b278e 134 Pfam PF01192 RNA polymerase Rpb6 8 58 7.3E-13 T 14-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS07065 95b6296aa8b9b709b49811bf717b278e 134 Gene3D G3DSA:3.90.940.10 1 66 1.7E-10 T 14-09-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS07065 95b6296aa8b9b709b49811bf717b278e 134 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.134 T 14-09-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS07065 95b6296aa8b9b709b49811bf717b278e 134 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 2.6E-16 T 14-09-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS07065 95b6296aa8b9b709b49811bf717b278e 134 PANTHER PTHR34476 2 90 5.3E-22 T 14-09-2016 AMK01_RS07065 95b6296aa8b9b709b49811bf717b278e 134 SUPERFAMILY SSF63562 1 81 4.58E-20 T 14-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS07065 95b6296aa8b9b709b49811bf717b278e 134 SMART SM01409 8 60 7.7E-13 T 14-09-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK01_RS07550 134cb983bffcf3b2992db4cd8698aa1e 198 Gene3D G3DSA:3.40.30.10 1 97 1.9E-17 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS07550 134cb983bffcf3b2992db4cd8698aa1e 198 SUPERFAMILY SSF52833 1 82 2.2E-16 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS07550 134cb983bffcf3b2992db4cd8698aa1e 198 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 75 9.3E-15 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS07550 134cb983bffcf3b2992db4cd8698aa1e 198 PANTHER PTHR11260 1 137 8.1E-19 T 14-09-2016 AMK01_RS15695 ab02ef63d53db4f6528dc8f85b195e21 376 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 281 375 4.4E-8 T 14-09-2016 IPR016936 Uncharacterised conserved protein UCP029693 AMK01_RS15695 ab02ef63d53db4f6528dc8f85b195e21 376 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 129 272 1.0E-11 T 14-09-2016 IPR016936 Uncharacterised conserved protein UCP029693 AMK01_RS05985 4d59339d6585fd49400008681a7c1d89 323 PANTHER PTHR23344:SF20 12 42 1.6E-50 T 14-09-2016 AMK01_RS05985 4d59339d6585fd49400008681a7c1d89 323 Gene3D G3DSA:3.20.20.190 15 322 4.0E-44 T 14-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMK01_RS05985 4d59339d6585fd49400008681a7c1d89 323 SUPERFAMILY SSF51695 34 319 7.95E-41 T 14-09-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AMK01_RS05985 4d59339d6585fd49400008681a7c1d89 323 PANTHER PTHR23344:SF20 65 274 1.6E-50 T 14-09-2016 AMK01_RS05985 4d59339d6585fd49400008681a7c1d89 323 PANTHER PTHR23344 12 42 1.6E-50 T 14-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 AMK01_RS05985 4d59339d6585fd49400008681a7c1d89 323 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 67 179 2.0E-17 T 14-09-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMK01_RS05985 4d59339d6585fd49400008681a7c1d89 323 PANTHER PTHR23344 65 274 1.6E-50 T 14-09-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 AMK01_RS06435 8c68f219cafc7957b6c4047d8d39bc15 162 ProDom PD102069 BLL3070 ATU0920 MEMBRANE AGR_C_1676P PRECURSOR TRANSMEMBRANE R01001 MLL7648 SIGNAL 1 93 9.0E-19 T 14-09-2016 AMK01_RS12290 9eeddf0c55d853bbd6117fc7f3e205b3 209 PANTHER PTHR19136 8 208 6.1E-29 T 14-09-2016 AMK01_RS12290 9eeddf0c55d853bbd6117fc7f3e205b3 209 SUPERFAMILY SSF53448 11 197 3.43E-26 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS12290 9eeddf0c55d853bbd6117fc7f3e205b3 209 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 11 197 1.1E-51 T 14-09-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 AMK01_RS12290 9eeddf0c55d853bbd6117fc7f3e205b3 209 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 9 200 25.195 T 14-09-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 AMK01_RS12290 9eeddf0c55d853bbd6117fc7f3e205b3 209 PANTHER PTHR19136:SF81 8 208 6.1E-29 T 14-09-2016 AMK01_RS12290 9eeddf0c55d853bbd6117fc7f3e205b3 209 Pfam PF12804 MobA-like NTP transferase domain 13 163 1.3E-28 T 14-09-2016 IPR025877 MobA-like NTP transferase AMK01_RS12290 9eeddf0c55d853bbd6117fc7f3e205b3 209 Gene3D G3DSA:3.90.550.10 11 205 5.4E-45 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS04730 eb3e5733e8bc599176dab7d93e8849d8 202 PANTHER PTHR33514 5 195 2.2E-24 T 14-09-2016 AMK01_RS04730 eb3e5733e8bc599176dab7d93e8849d8 202 Pfam PF02361 Cobalt transport protein 10 195 9.7E-14 T 14-09-2016 IPR003339 ABC/ECF transporter, transmembrane component AMK01_RS04730 eb3e5733e8bc599176dab7d93e8849d8 202 PANTHER PTHR33514:SF4 5 195 2.2E-24 T 14-09-2016 AMK01_RS19580 87d4911debda2ceb025c237da7b132ad 139 SUPERFAMILY SSF55729 24 121 5.15E-17 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19580 87d4911debda2ceb025c237da7b132ad 139 Gene3D G3DSA:3.40.630.30 2 138 1.1E-20 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19580 87d4911debda2ceb025c237da7b132ad 139 Pfam PF00583 Acetyltransferase (GNAT) family 40 116 4.6E-10 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS09335 ff905aabf9e471b788d5e265a1044d40 395 Gene3D G3DSA:3.20.20.70 18 393 1.3E-124 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS09335 ff905aabf9e471b788d5e265a1044d40 395 PANTHER PTHR10578:SF65 1 395 8.0E-124 T 14-09-2016 AMK01_RS09335 ff905aabf9e471b788d5e265a1044d40 395 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 290 296 - T 14-09-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AMK01_RS09335 ff905aabf9e471b788d5e265a1044d40 395 SUPERFAMILY SSF51395 241 390 4.4E-91 T 14-09-2016 AMK01_RS09335 ff905aabf9e471b788d5e265a1044d40 395 SUPERFAMILY SSF51395 18 208 4.4E-91 T 14-09-2016 AMK01_RS09335 ff905aabf9e471b788d5e265a1044d40 395 Pfam PF01070 FMN-dependent dehydrogenase 28 393 7.7E-125 T 14-09-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 AMK01_RS09335 ff905aabf9e471b788d5e265a1044d40 395 PANTHER PTHR10578 1 395 8.0E-124 T 14-09-2016 AMK01_RS09335 ff905aabf9e471b788d5e265a1044d40 395 PIRSF PIRSF000138 1 395 1.4E-124 T 14-09-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AMK01_RS06060 d2cbe11492be79495a3ed4c5f125db29 155 Pfam PF07617 Protein of unknown function (DUF1579) 8 153 1.8E-51 T 14-09-2016 IPR011473 Protein of unknown function DUF1579 AMK01_RS15960 0ec1b0fe04b02f0b483c93da5bd01b02 383 PANTHER PTHR31088:SF7 172 380 1.0E-31 T 14-09-2016 AMK01_RS15960 0ec1b0fe04b02f0b483c93da5bd01b02 383 Pfam PF04012 PspA/IM30 family 172 297 1.6E-15 T 14-09-2016 IPR007157 PspA/IM30 AMK01_RS15960 0ec1b0fe04b02f0b483c93da5bd01b02 383 PANTHER PTHR31088 172 380 1.0E-31 T 14-09-2016 AMK01_RS04555 60106ba98cec1517976b5da75e66b0fb 270 Pfam PF06629 MltA-interacting protein MipA 39 265 3.6E-40 T 14-09-2016 IPR010583 MltA-interacting MipA AMK01_RS05730 32d0b3dbbb3b09dae9e06650e03f5077 129 Pfam PF04138 GtrA-like protein 6 119 1.1E-13 T 14-09-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMK01_RS19650 802c749726d3b407da1cc6e6f67c06f3 205 SMART SM00271 146 204 2.2E-14 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS19650 802c749726d3b407da1cc6e6f67c06f3 205 Gene3D G3DSA:1.10.287.110 145 201 2.4E-13 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS19650 802c749726d3b407da1cc6e6f67c06f3 205 PRINTS PR00625 DnaJ domain signature 167 182 1.8E-10 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS19650 802c749726d3b407da1cc6e6f67c06f3 205 PRINTS PR00625 DnaJ domain signature 184 204 1.8E-10 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS19650 802c749726d3b407da1cc6e6f67c06f3 205 PRINTS PR00625 DnaJ domain signature 149 167 1.8E-10 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS19650 802c749726d3b407da1cc6e6f67c06f3 205 SUPERFAMILY SSF46565 147 200 1.01E-14 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS19650 802c749726d3b407da1cc6e6f67c06f3 205 Pfam PF00226 DnaJ domain 149 201 4.0E-14 T 14-09-2016 IPR001623 DnaJ domain AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 SUPERFAMILY SSF48317 211 332 7.06E-25 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 Gene3D G3DSA:2.160.20.20 453 615 2.5E-6 T 14-09-2016 IPR012332 P22 tailspike C-terminal domain-like AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 Pfam PF12951 Passenger-associated-transport-repeat 488 516 1.3E-7 T 14-09-2016 IPR013425 Autotransporter-associated beta strand repeat AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 Pfam PF01569 PAP2 superfamily 218 321 1.5E-12 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 SUPERFAMILY SSF51126 429 630 1.04E-10 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 Gene3D G3DSA:1.20.144.10 201 344 9.1E-54 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 Gene3D G3DSA:1.20.144.10 85 161 9.1E-54 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 SMART SM00014 203 324 7.9E-8 T 14-09-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK01_RS17055 72852540271ee12c93ebcb5f25b2e713 633 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 488 518 2.6E-9 T 14-09-2016 IPR013425 Autotransporter-associated beta strand repeat AMK01_RS09775 cb6bde08d42200569722d4f4fcaeaf11 298 SUPERFAMILY SSF54593 180 275 3.42E-5 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS09775 cb6bde08d42200569722d4f4fcaeaf11 298 SUPERFAMILY SSF54593 10 131 4.61E-6 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS09775 cb6bde08d42200569722d4f4fcaeaf11 298 Pfam PF13468 Glyoxalase-like domain 11 197 2.4E-28 T 14-09-2016 IPR025870 Glyoxalase-like domain AMK01_RS20640 29763f28fc6bf30b5f5b902b4ff12ce8 86 Pfam PF13488 Glycine zipper 24 65 1.1E-8 T 14-09-2016 AMK01_RS24365 7172eab6263b646d2975af3e0cba2e9d 52 Gene3D G3DSA:3.90.1590.10 6 50 6.8E-4 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS24365 7172eab6263b646d2975af3e0cba2e9d 52 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 2 50 1.4E-5 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS24365 7172eab6263b646d2975af3e0cba2e9d 52 SUPERFAMILY SSF51316 5 51 3.35E-5 T 14-09-2016 IPR011057 Mss4-like AMK01_RS10320 adfb6077f2c3c7ffeec3429342cf7efc 102 Gene3D G3DSA:1.10.10.10 7 70 2.2E-5 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS08585 6dac25d3ffe0b57a632c60e828d95acf 218 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 10 203 24.005 T 14-09-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AMK01_RS08585 6dac25d3ffe0b57a632c60e828d95acf 218 Pfam PF01794 Ferric reductase like transmembrane component 53 162 1.5E-15 T 14-09-2016 IPR013130 Ferric reductase transmembrane component-like domain AMK01_RS08585 6dac25d3ffe0b57a632c60e828d95acf 218 PANTHER PTHR36964 5 211 4.9E-41 T 14-09-2016 AMK01_RS05515 f266131d5ee15bbac6c06f990d9ec34e 267 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 28 264 5.5E-61 T 14-09-2016 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 AMK01_RS05515 f266131d5ee15bbac6c06f990d9ec34e 267 PANTHER PTHR11104 8 266 3.3E-58 T 14-09-2016 AMK01_RS05515 f266131d5ee15bbac6c06f990d9ec34e 267 SUPERFAMILY SSF110710 5 266 2.04E-75 T 14-09-2016 AMK01_RS13880 6276064f0f8e620b3cc1a10328f08a55 191 PANTHER PTHR39327 33 170 6.1E-25 T 14-09-2016 AMK01_RS13880 6276064f0f8e620b3cc1a10328f08a55 191 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 32 179 9.1E-42 T 14-09-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMK01_RS13880 6276064f0f8e620b3cc1a10328f08a55 191 PANTHER PTHR39327:SF2 33 170 6.1E-25 T 14-09-2016 AMK01_RS17095 be2b8f8fe04bd6b4688a2f2fece096c5 300 PANTHER PTHR11795 1 300 8.2E-124 T 14-09-2016 AMK01_RS17095 be2b8f8fe04bd6b4688a2f2fece096c5 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 284 2.5E-51 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS17095 be2b8f8fe04bd6b4688a2f2fece096c5 300 PANTHER PTHR11795:SF371 1 300 8.2E-124 T 14-09-2016 AMK01_RS20985 8fad685f22f5e7f29fd0a7ba8a27832d 317 Gene3D G3DSA:3.40.50.300 101 205 2.0E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS20985 8fad685f22f5e7f29fd0a7ba8a27832d 317 PIRSF PIRSF034285 1 315 1.1E-68 T 14-09-2016 IPR017026 Inducible mutagenesis protein A AMK01_RS20985 8fad685f22f5e7f29fd0a7ba8a27832d 317 SUPERFAMILY SSF52540 94 204 7.04E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS24820 8a5d065e8ae82cb116b5e654fafebdef 206 Pfam PF13756 Stimulus-sensing domain 43 152 2.1E-37 T 14-09-2016 IPR025919 Stimulus-sensing domain AMK01_RS01725 d256e18ae5cd4ad5d6ea3110c534b6db 385 PANTHER PTHR30002 9 377 3.7E-135 T 14-09-2016 AMK01_RS01725 d256e18ae5cd4ad5d6ea3110c534b6db 385 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 199 210 - T 14-09-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK01_RS01725 d256e18ae5cd4ad5d6ea3110c534b6db 385 Pfam PF13484 4Fe-4S double cluster binding domain 198 262 1.5E-18 T 14-09-2016 AMK01_RS01725 d256e18ae5cd4ad5d6ea3110c534b6db 385 SUPERFAMILY SSF46548 145 262 5.07E-17 T 14-09-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK01_RS01725 d256e18ae5cd4ad5d6ea3110c534b6db 385 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 22 353 4.3E-131 T 14-09-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS01725 d256e18ae5cd4ad5d6ea3110c534b6db 385 PANTHER PTHR30002:SF4 9 377 3.7E-135 T 14-09-2016 AMK01_RS01725 d256e18ae5cd4ad5d6ea3110c534b6db 385 Pfam PF08331 Domain of unknown function (DUF1730) 70 146 3.0E-21 T 14-09-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK01_RS01725 d256e18ae5cd4ad5d6ea3110c534b6db 385 Gene3D G3DSA:3.30.70.20 197 268 1.7E-7 T 14-09-2016 AMK01_RS05320 711f4f7cfb092e0fc693d74e4aa983b8 298 PANTHER PTHR10730:SF27 24 136 4.7E-16 T 14-09-2016 AMK01_RS05320 711f4f7cfb092e0fc693d74e4aa983b8 298 PANTHER PTHR10730 24 136 4.7E-16 T 14-09-2016 AMK01_RS05320 711f4f7cfb092e0fc693d74e4aa983b8 298 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 22 142 3.6E-14 T 14-09-2016 IPR002654 Glycosyl transferase, family 25 AMK01_RS21950 74d1a108f84e11c8e1aa24df4a6b3892 231 Pfam PF03473 MOSC domain 168 225 3.3E-8 T 14-09-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMK01_RS21950 74d1a108f84e11c8e1aa24df4a6b3892 231 PANTHER PTHR30212 137 225 3.9E-19 T 14-09-2016 AMK01_RS21950 74d1a108f84e11c8e1aa24df4a6b3892 231 Gene3D G3DSA:2.40.33.20 121 230 6.1E-33 T 14-09-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AMK01_RS21950 74d1a108f84e11c8e1aa24df4a6b3892 231 SUPERFAMILY SSF50800 121 230 1.05E-28 T 14-09-2016 IPR011037 Pyruvate kinase-like, insert domain AMK01_RS21950 74d1a108f84e11c8e1aa24df4a6b3892 231 PANTHER PTHR30212:SF2 137 225 3.9E-19 T 14-09-2016 AMK01_RS00715 9c510e76bd4673f06e7225c8935ec6a0 282 Pfam PF00561 alpha/beta hydrolase fold 61 160 2.7E-17 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS00715 9c510e76bd4673f06e7225c8935ec6a0 282 SUPERFAMILY SSF53474 34 277 9.78E-55 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS00715 9c510e76bd4673f06e7225c8935ec6a0 282 PANTHER PTHR10992 3 281 5.4E-47 T 14-09-2016 AMK01_RS00715 9c510e76bd4673f06e7225c8935ec6a0 282 Gene3D G3DSA:3.40.50.1820 40 278 4.0E-53 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS05535 c0cebdaec797b250f695838fbbf80014 107 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 26 101 8.2E-24 T 14-09-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system AMK01_RS04465 83b1eaef681d74b93b5e0204929c874d 75 Pfam PF09413 Putative prokaryotic signal transducing protein 1 65 4.3E-22 T 14-09-2016 IPR018551 Domain of unknown function DUF2007 AMK01_RS04465 83b1eaef681d74b93b5e0204929c874d 75 Gene3D G3DSA:3.30.70.790 1 74 2.8E-36 T 14-09-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AMK01_RS04465 83b1eaef681d74b93b5e0204929c874d 75 SUPERFAMILY SSF54913 1 73 5.56E-25 T 14-09-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMK01_RS13720 4981ffe0f1569579d252bb734665a4c7 406 Gene3D G3DSA:1.10.10.10 335 369 7.9E-5 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS13720 4981ffe0f1569579d252bb734665a4c7 406 SUPERFAMILY SSF46785 332 385 2.98E-5 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS09675 8e1262930ff7e028099af1607ce11b69 358 PANTHER PTHR38432:SF1 23 357 1.0E-64 T 14-09-2016 AMK01_RS09675 8e1262930ff7e028099af1607ce11b69 358 PIRSF PIRSF026508 2 358 1.6E-86 T 14-09-2016 IPR008863 Toxic anion resistance AMK01_RS09675 8e1262930ff7e028099af1607ce11b69 358 PANTHER PTHR38432 23 357 1.0E-64 T 14-09-2016 AMK01_RS09675 8e1262930ff7e028099af1607ce11b69 358 Pfam PF05816 Toxic anion resistance protein (TelA) 25 356 1.2E-93 T 14-09-2016 IPR008863 Toxic anion resistance AMK01_RS16345 a513238ed7a39a84bed479b6fefafe3e 321 Pfam PF05621 Bacterial TniB protein 63 285 1.7E-22 T 14-09-2016 IPR008868 Bacterial TniB AMK01_RS16345 a513238ed7a39a84bed479b6fefafe3e 321 SUPERFAMILY SSF52540 41 295 3.68E-9 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16345 a513238ed7a39a84bed479b6fefafe3e 321 Gene3D G3DSA:3.40.50.300 49 164 2.3E-5 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS15555 5a7cc9e97dcc4579b85b3b7952b3f706 207 Gene3D G3DSA:2.30.270.10 101 170 1.6E-30 T 14-09-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain AMK01_RS15555 5a7cc9e97dcc4579b85b3b7952b3f706 207 Gene3D G3DSA:3.10.540.10 18 100 4.4E-37 T 14-09-2016 AMK01_RS15555 5a7cc9e97dcc4579b85b3b7952b3f706 207 Pfam PF06938 Protein of unknown function (DUF1285) 49 194 2.0E-56 T 14-09-2016 IPR010707 Protein of unknown function DUF1285 AMK01_RS15555 5a7cc9e97dcc4579b85b3b7952b3f706 207 PIRSF PIRSF029557 1 206 9.9E-100 T 14-09-2016 IPR010707 Protein of unknown function DUF1285 AMK01_RS08975 46afb6ebf338d50b308387204896ee86 214 SUPERFAMILY SSF51182 104 201 2.23E-16 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS08975 46afb6ebf338d50b308387204896ee86 214 Gene3D G3DSA:2.60.120.10 106 200 1.8E-12 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS08975 46afb6ebf338d50b308387204896ee86 214 Pfam PF12973 ChrR Cupin-like domain 118 192 1.4E-12 T 14-09-2016 IPR025979 ChrR-like cupin domain AMK01_RS08975 46afb6ebf338d50b308387204896ee86 214 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 10 209 2.6E-41 T 14-09-2016 IPR012807 Anti-sigma factor ChrR, putative AMK01_RS12815 0a8042425370697a5a3338dfc1036527 77 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 7 69 9.3E-29 T 14-09-2016 IPR018684 Protein of unknown function DUF2171 AMK01_RS12500 8057f156b43d7cf7bd748b1ba80cc8a5 71 PANTHER PTHR35175:SF2 1 51 1.5E-18 T 14-09-2016 AMK01_RS12500 8057f156b43d7cf7bd748b1ba80cc8a5 71 PANTHER PTHR35175 1 51 1.5E-18 T 14-09-2016 AMK01_RS12500 8057f156b43d7cf7bd748b1ba80cc8a5 71 Pfam PF06945 Protein of unknown function (DUF1289) 3 49 7.8E-21 T 14-09-2016 IPR010710 Protein of unknown function DUF1289 AMK01_RS29130 1967ec33471873096182b47ef5217289 140 Pfam PF03968 OstA-like protein 29 135 4.6E-17 T 14-09-2016 IPR005653 Organic solvent tolerance-like, N-terminal AMK01_RS29130 1967ec33471873096182b47ef5217289 140 Gene3D G3DSA:2.60.450.10 21 136 4.6E-24 T 14-09-2016 AMK01_RS15905 47d6284af90c90d74289d1ef71d5f514 271 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 15 259 3.6E-88 T 14-09-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC AMK01_RS15905 47d6284af90c90d74289d1ef71d5f514 271 Pfam PF13478 XdhC Rossmann domain 116 258 3.6E-28 T 14-09-2016 IPR027051 XdhC Rossmann domain AMK01_RS15905 47d6284af90c90d74289d1ef71d5f514 271 Pfam PF02625 XdhC and CoxI family 9 65 2.5E-12 T 14-09-2016 IPR003777 XdhC- CoxI AMK01_RS15905 47d6284af90c90d74289d1ef71d5f514 271 PANTHER PTHR30388:SF5 15 262 1.2E-41 T 14-09-2016 AMK01_RS15905 47d6284af90c90d74289d1ef71d5f514 271 SUPERFAMILY SSF51735 116 198 7.22E-5 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15905 47d6284af90c90d74289d1ef71d5f514 271 Gene3D G3DSA:3.40.50.720 116 208 1.6E-5 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS15905 47d6284af90c90d74289d1ef71d5f514 271 PANTHER PTHR30388 15 262 1.2E-41 T 14-09-2016 AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 1.4E-57 T 14-09-2016 AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PANTHER PTHR24322 11 139 3.1E-49 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PANTHER PTHR24322 155 187 3.1E-49 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.6E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.6E-6 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.3E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.3E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.3E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.3E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.3E-31 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 Gene3D G3DSA:3.40.50.720 3 253 1.3E-73 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS10520 5960730f5b4363457207e963594bb31e 254 SUPERFAMILY SSF51735 5 249 3.59E-71 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS19355 b5a9e8a9f5c99a8693c655949a649b53 55 Pfam PF04964 Flp/Fap pilin component 7 51 7.0E-14 T 14-09-2016 IPR007047 Flp/Fap pilin component AMK01_RS19630 eb9ccd3783f2d26427cc36b8f881d73b 188 Gene3D G3DSA:3.40.50.300 3 174 8.3E-18 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19630 eb9ccd3783f2d26427cc36b8f881d73b 188 SUPERFAMILY SSF52540 138 174 2.37E-17 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19630 eb9ccd3783f2d26427cc36b8f881d73b 188 SUPERFAMILY SSF52540 2 109 2.37E-17 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS19630 eb9ccd3783f2d26427cc36b8f881d73b 188 PANTHER PTHR21087:SF7 4 175 6.2E-34 T 14-09-2016 AMK01_RS19630 eb9ccd3783f2d26427cc36b8f881d73b 188 PANTHER PTHR21087 4 175 6.2E-34 T 14-09-2016 AMK01_RS06690 f1b2e93224355d719c0cf3c97c3749b3 300 PANTHER PTHR12715 17 299 3.0E-22 T 14-09-2016 AMK01_RS06690 f1b2e93224355d719c0cf3c97c3749b3 300 SUPERFAMILY SSF103481 199 293 5.36E-8 T 14-09-2016 AMK01_RS06690 f1b2e93224355d719c0cf3c97c3749b3 300 Pfam PF00892 EamA-like transporter family 16 149 2.4E-10 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS06690 f1b2e93224355d719c0cf3c97c3749b3 300 Pfam PF00892 EamA-like transporter family 168 293 1.2E-8 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS06690 f1b2e93224355d719c0cf3c97c3749b3 300 SUPERFAMILY SSF103481 52 152 8.63E-13 T 14-09-2016 AMK01_RS17535 bff2e2073f0b5e0828a58d11f3f8b34f 146 SMART SM00116 79 126 9.9E-7 T 14-09-2016 IPR000644 CBS domain AMK01_RS17535 bff2e2073f0b5e0828a58d11f3f8b34f 146 SMART SM00116 13 61 2.0 T 14-09-2016 IPR000644 CBS domain AMK01_RS17535 bff2e2073f0b5e0828a58d11f3f8b34f 146 Pfam PF00571 CBS domain 3 61 4.1E-8 T 14-09-2016 IPR000644 CBS domain AMK01_RS17535 bff2e2073f0b5e0828a58d11f3f8b34f 146 Pfam PF00571 CBS domain 72 125 4.1E-9 T 14-09-2016 IPR000644 CBS domain AMK01_RS17535 bff2e2073f0b5e0828a58d11f3f8b34f 146 SUPERFAMILY SSF54631 1 141 3.16E-30 T 14-09-2016 AMK01_RS17535 bff2e2073f0b5e0828a58d11f3f8b34f 146 Gene3D G3DSA:3.10.580.10 2 125 1.3E-26 T 14-09-2016 AMK01_RS17535 bff2e2073f0b5e0828a58d11f3f8b34f 146 PANTHER PTHR11911 1 142 7.3E-26 T 14-09-2016 AMK01_RS18805 33bece6df9905fc686e895776213d20b 133 PANTHER PTHR33452:SF4 9 131 4.6E-40 T 14-09-2016 AMK01_RS18805 33bece6df9905fc686e895776213d20b 133 Pfam PF07681 DoxX 13 87 6.4E-9 T 14-09-2016 IPR032808 DoxX family AMK01_RS18805 33bece6df9905fc686e895776213d20b 133 PANTHER PTHR33452 9 131 4.6E-40 T 14-09-2016 AMK01_RS15025 c4fb87823d17753f8854afcfd311a33c 246 PANTHER PTHR34387 1 246 1.6E-55 T 14-09-2016 AMK01_RS15025 c4fb87823d17753f8854afcfd311a33c 246 PANTHER PTHR34387:SF1 1 246 1.6E-55 T 14-09-2016 AMK01_RS15025 c4fb87823d17753f8854afcfd311a33c 246 Pfam PF04402 Protein of unknown function (DUF541) 37 242 4.6E-51 T 14-09-2016 IPR007497 Protein of unknown function DUF541 AMK01_RS06460 e9dbdea9937e2f490bd1296dd8e944b3 358 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 95 153 1.2E-8 T 14-09-2016 IPR019285 Protein of unknown function DUF2336 AMK01_RS19055 99666ecee0e11a7652729367783d3485 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 274 1.3E-21 T 14-09-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK01_RS19055 99666ecee0e11a7652729367783d3485 379 SUPERFAMILY SSF111369 57 276 3.53E-24 T 14-09-2016 AMK01_RS19055 99666ecee0e11a7652729367783d3485 379 PANTHER PTHR30469 17 375 2.5E-71 T 14-09-2016 AMK01_RS19055 99666ecee0e11a7652729367783d3485 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 364 2.5E-74 T 14-09-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK01_RS19055 99666ecee0e11a7652729367783d3485 379 Gene3D G3DSA:2.40.50.100 177 209 2.3E-14 T 14-09-2016 AMK01_RS19055 99666ecee0e11a7652729367783d3485 379 Gene3D G3DSA:2.40.50.100 72 102 2.3E-14 T 14-09-2016 AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 PANTHER PTHR24023:SF593 66 394 2.4E-35 T 14-09-2016 AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 PANTHER PTHR24023:SF593 14 44 2.4E-35 T 14-09-2016 AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 Gene3D G3DSA:3.30.1540.10 234 316 1.2E-27 T 14-09-2016 AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 SUPERFAMILY SSF89796 9 394 5.76E-139 T 14-09-2016 IPR023606 CoA-transferase family III domain AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 Gene3D G3DSA:3.40.50.10540 317 392 4.3E-114 T 14-09-2016 IPR023606 CoA-transferase family III domain AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 Gene3D G3DSA:3.40.50.10540 7 228 4.3E-114 T 14-09-2016 IPR023606 CoA-transferase family III domain AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 PANTHER PTHR24023 66 394 2.4E-35 T 14-09-2016 AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 Pfam PF02515 CoA-transferase family III 11 383 5.9E-130 T 14-09-2016 IPR003673 CoA-transferase family III GO:0003824 AMK01_RS14770 874ee31c1de37ab1ce271eb70461feb0 400 PANTHER PTHR24023 14 44 2.4E-35 T 14-09-2016 AMK01_RS06080 21bff085d5dff11af5cc8dc8a85f8b2f 63 Gene3D G3DSA:1.10.260.40 1 45 6.2E-4 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS08650 840e4492530c65f13530047d51e218f2 207 SUPERFAMILY SSF69118 7 174 7.49E-38 T 14-09-2016 IPR029032 AhpD-like AMK01_RS08650 840e4492530c65f13530047d51e218f2 207 Pfam PF02627 Carboxymuconolactone decarboxylase family 40 98 1.2E-4 T 14-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS08650 840e4492530c65f13530047d51e218f2 207 Pfam PF02627 Carboxymuconolactone decarboxylase family 106 170 8.8E-5 T 14-09-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK01_RS08650 840e4492530c65f13530047d51e218f2 207 PANTHER PTHR35446 1 188 5.7E-21 T 14-09-2016 AMK01_RS08650 840e4492530c65f13530047d51e218f2 207 Gene3D G3DSA:1.20.1290.10 30 173 8.1E-25 T 14-09-2016 IPR029032 AhpD-like AMK01_RS19150 6b4c38b774c06570653b1cc24e1e98b6 323 PANTHER PTHR32243 21 323 6.1E-117 T 14-09-2016 AMK01_RS19150 6b4c38b774c06570653b1cc24e1e98b6 323 PANTHER PTHR32243:SF23 21 323 6.1E-117 T 14-09-2016 AMK01_RS19150 6b4c38b774c06570653b1cc24e1e98b6 323 Gene3D G3DSA:1.10.3720.10 24 308 4.2E-54 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19150 6b4c38b774c06570653b1cc24e1e98b6 323 SUPERFAMILY SSF161098 27 323 2.52E-63 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS19150 6b4c38b774c06570653b1cc24e1e98b6 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 2.0E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08690 6b4c38b774c06570653b1cc24e1e98b6 323 PANTHER PTHR32243 21 323 6.1E-117 T 14-09-2016 AMK01_RS08690 6b4c38b774c06570653b1cc24e1e98b6 323 PANTHER PTHR32243:SF23 21 323 6.1E-117 T 14-09-2016 AMK01_RS08690 6b4c38b774c06570653b1cc24e1e98b6 323 Gene3D G3DSA:1.10.3720.10 24 308 4.2E-54 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08690 6b4c38b774c06570653b1cc24e1e98b6 323 SUPERFAMILY SSF161098 27 323 2.52E-63 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08690 6b4c38b774c06570653b1cc24e1e98b6 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 2.0E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS08935 5d96d61f973e53fa24c93b3c2fefe124 303 SUPERFAMILY SSF103481 186 282 3.14E-13 T 14-09-2016 AMK01_RS08935 5d96d61f973e53fa24c93b3c2fefe124 303 PANTHER PTHR22911:SF70 7 290 7.7E-45 T 14-09-2016 AMK01_RS08935 5d96d61f973e53fa24c93b3c2fefe124 303 SUPERFAMILY SSF103481 57 143 8.89E-10 T 14-09-2016 AMK01_RS08935 5d96d61f973e53fa24c93b3c2fefe124 303 PANTHER PTHR22911 7 290 7.7E-45 T 14-09-2016 AMK01_RS08935 5d96d61f973e53fa24c93b3c2fefe124 303 Pfam PF00892 EamA-like transporter family 151 278 5.9E-13 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS08935 5d96d61f973e53fa24c93b3c2fefe124 303 Pfam PF00892 EamA-like transporter family 7 140 2.9E-12 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS16435 07ef9fd88ac25a0aaf6976da5bd80ae6 93 Pfam PF06169 Protein of unknown function (DUF982) 17 87 6.5E-22 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS00370 07b511d1e21e855eee9e4377ca81105e 172 Pfam PF06191 Protein of unknown function (DUF995) 14 151 5.6E-55 T 14-09-2016 IPR009337 Protein of unknown function DUF995 AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 Gene3D G3DSA:1.10.10.10 3 68 2.9E-13 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 SMART SM00895 77 200 6.5E-17 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 SUPERFAMILY SSF46785 5 95 1.42E-11 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 SUPERFAMILY SSF48008 73 202 4.97E-22 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 SMART SM00345 9 67 2.2E-5 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 PANTHER PTHR11751 12 93 1.3E-13 T 14-09-2016 AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 Pfam PF07729 FCD domain 78 199 1.8E-25 T 14-09-2016 IPR011711 GntR, C-terminal AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 67 2.3E-10 T 14-09-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK01_RS10655 a85fc41cbedb52e987d7d3e863980d02 204 Gene3D G3DSA:1.20.120.530 73 200 2.4E-20 T 14-09-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal AMK01_RS18345 449e330e279862c51940dd54ab9f7772 344 PANTHER PTHR11108 1 341 8.2E-110 T 14-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMK01_RS18345 449e330e279862c51940dd54ab9f7772 344 Gene3D G3DSA:3.40.50.1400 222 341 2.5E-34 T 14-09-2016 AMK01_RS18345 449e330e279862c51940dd54ab9f7772 344 Hamap MF_00323 Ferrochelatase [hemH]. 18 340 37.155 T 14-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMK01_RS18345 449e330e279862c51940dd54ab9f7772 344 SUPERFAMILY SSF53800 17 344 1.96E-103 T 14-09-2016 AMK01_RS18345 449e330e279862c51940dd54ab9f7772 344 TIGRFAM TIGR00109 hemH: ferrochelatase 16 340 1.2E-88 T 14-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMK01_RS18345 449e330e279862c51940dd54ab9f7772 344 Pfam PF00762 Ferrochelatase 19 339 1.3E-109 T 14-09-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMK01_RS18345 449e330e279862c51940dd54ab9f7772 344 Gene3D G3DSA:3.40.50.1400 18 221 1.2E-65 T 14-09-2016 AMK01_RS18345 449e330e279862c51940dd54ab9f7772 344 ProSitePatterns PS00534 Ferrochelatase signature. 209 228 - T 14-09-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 AMK01_RS05470 b3182d284febefb63aa9cbeea22c1194 138 Gene3D G3DSA:3.90.1590.10 1 136 1.3E-31 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS05470 b3182d284febefb63aa9cbeea22c1194 138 PANTHER PTHR33337:SF5 4 138 4.0E-58 T 14-09-2016 AMK01_RS05470 b3182d284febefb63aa9cbeea22c1194 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 116 9.2E-24 T 14-09-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 AMK01_RS05470 b3182d284febefb63aa9cbeea22c1194 138 PANTHER PTHR33337 4 138 4.0E-58 T 14-09-2016 AMK01_RS05470 b3182d284febefb63aa9cbeea22c1194 138 SUPERFAMILY SSF51316 1 137 9.0E-36 T 14-09-2016 IPR011057 Mss4-like AMK01_RS20835 4d6c493f54ae20e635191a7d4847bf8b 443 Pfam PF10091 Putative glucoamylase 182 414 1.9E-79 T 14-09-2016 IPR019282 Domain of unknown function DUF2329 AMK01_RS20835 4d6c493f54ae20e635191a7d4847bf8b 443 PIRSF PIRSF028431 1 440 1.9E-153 T 14-09-2016 IPR016883 Uncharacterised conserved protein UCP028431 AMK01_RS19575 5dff15fcdda4c16043f63d0dbab98066 338 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 36 336 4.1E-71 T 14-09-2016 IPR018666 Protein of unknown function DUF2125 AMK01_RS06465 89462d2269f1e162417c83d19cdf8afc 183 PIRSF PIRSF010244 1 181 2.7E-59 T 14-09-2016 IPR014456 Uncharacterised conserved protein UCP010244, integral membrane protein AMK01_RS14300 ddef88c8cfde965990fed43c24101d36 282 Pfam PF00248 Aldo/keto reductase family 20 268 6.2E-51 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS14300 ddef88c8cfde965990fed43c24101d36 282 Gene3D G3DSA:3.20.20.100 13 271 1.6E-78 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS14300 ddef88c8cfde965990fed43c24101d36 282 PANTHER PTHR11732 6 270 6.0E-117 T 14-09-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK01_RS14300 ddef88c8cfde965990fed43c24101d36 282 SUPERFAMILY SSF51430 10 272 2.36E-81 T 14-09-2016 IPR023210 NADP-dependent oxidoreductase domain AMK01_RS14300 ddef88c8cfde965990fed43c24101d36 282 PRINTS PR00069 Aldo-keto reductase signature 44 68 7.9E-14 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS14300 ddef88c8cfde965990fed43c24101d36 282 PRINTS PR00069 Aldo-keto reductase signature 130 147 7.9E-14 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS14300 ddef88c8cfde965990fed43c24101d36 282 PRINTS PR00069 Aldo-keto reductase signature 100 118 7.9E-14 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS14300 ddef88c8cfde965990fed43c24101d36 282 PRINTS PR00069 Aldo-keto reductase signature 204 228 7.9E-14 T 14-09-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK01_RS20980 80221f38ab463ea0754a42de0de5b8fe 472 Pfam PF00817 impB/mucB/samB family 3 93 1.9E-6 T 14-09-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK01_RS20980 80221f38ab463ea0754a42de0de5b8fe 472 PANTHER PTHR35369 1 472 2.3E-97 T 14-09-2016 AMK01_RS20980 80221f38ab463ea0754a42de0de5b8fe 472 Gene3D G3DSA:1.10.150.20 124 191 7.0E-7 T 14-09-2016 AMK01_RS20980 80221f38ab463ea0754a42de0de5b8fe 472 PANTHER PTHR35369:SF2 1 472 2.3E-97 T 14-09-2016 AMK01_RS20980 80221f38ab463ea0754a42de0de5b8fe 472 SUPERFAMILY SSF56672 3 191 6.23E-38 T 14-09-2016 AMK01_RS12370 1331921cfdb1b9b1d5fa744f4b8834c4 88 Pfam PF06233 Usg-like family 8 86 9.4E-42 T 14-09-2016 IPR009354 Usg-like UniPathway: UPA00035 AMK01_RS22435 2ce7b31fffc58cfd607fb410526fc349 257 Gene3D G3DSA:3.90.1150.10 177 228 5.0E-7 T 14-09-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK01_RS22435 2ce7b31fffc58cfd607fb410526fc349 257 PANTHER PTHR11986:SF23 112 251 3.1E-18 T 14-09-2016 AMK01_RS22435 2ce7b31fffc58cfd607fb410526fc349 257 SUPERFAMILY SSF53383 174 249 2.41E-12 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS22435 2ce7b31fffc58cfd607fb410526fc349 257 PANTHER PTHR11986 112 251 3.1E-18 T 14-09-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMK01_RS24755 9205d896bc97e337ccc45ab2a41ac5d2 192 Gene3D G3DSA:3.90.320.10 98 140 3.4E-4 T 14-09-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AMK01_RS24755 9205d896bc97e337ccc45ab2a41ac5d2 192 SUPERFAMILY SSF52980 24 158 1.88E-7 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AMK01_RS24755 9205d896bc97e337ccc45ab2a41ac5d2 192 Pfam PF12705 PD-(D/E)XK nuclease superfamily 20 167 5.3E-14 T 14-09-2016 AMK01_RS03055 c16266e39936df075b669eca8bfc3fc1 81 Pfam PF06169 Protein of unknown function (DUF982) 9 78 6.4E-22 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS01985 9b7478a4130b37dc4eefb8d3ceeff44e 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 128 4.0E-13 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS01985 9b7478a4130b37dc4eefb8d3ceeff44e 141 Gene3D G3DSA:3.10.180.10 4 135 1.8E-31 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS01985 9b7478a4130b37dc4eefb8d3ceeff44e 141 SUPERFAMILY SSF54593 3 131 2.95E-29 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS03185 47717570e06334554db422c6fe11e608 418 PANTHER PTHR10283:SF21 13 412 2.4E-101 T 14-09-2016 AMK01_RS03185 47717570e06334554db422c6fe11e608 418 Pfam PF02040 Arsenical pump membrane protein 18 416 5.3E-36 T 14-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMK01_RS03185 47717570e06334554db422c6fe11e608 418 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 9.8E-27 T 14-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMK01_RS03185 47717570e06334554db422c6fe11e608 418 PRINTS PR00758 Arsenical pump membrane protein signature 358 383 9.8E-27 T 14-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMK01_RS03185 47717570e06334554db422c6fe11e608 418 PRINTS PR00758 Arsenical pump membrane protein signature 391 415 9.8E-27 T 14-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMK01_RS03185 47717570e06334554db422c6fe11e608 418 PRINTS PR00758 Arsenical pump membrane protein signature 179 202 9.8E-27 T 14-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMK01_RS03185 47717570e06334554db422c6fe11e608 418 PRINTS PR00758 Arsenical pump membrane protein signature 276 300 9.8E-27 T 14-09-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AMK01_RS03185 47717570e06334554db422c6fe11e608 418 PANTHER PTHR10283 13 412 2.4E-101 T 14-09-2016 AMK01_RS18065 96ae5e97f261f298d163eed5fb5d3e3c 624 PANTHER PTHR32507 1 574 2.4E-167 T 14-09-2016 AMK01_RS18065 96ae5e97f261f298d163eed5fb5d3e3c 624 Pfam PF00999 Sodium/hydrogen exchanger family 12 388 3.2E-45 T 14-09-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK01_RS18065 96ae5e97f261f298d163eed5fb5d3e3c 624 PANTHER PTHR32507:SF7 1 574 2.4E-167 T 14-09-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 AMK01_RS18270 1e501cd795bda43c916e2bb16f8ae2e8 184 Pfam PF16157 Domain of unknown function (DUF4865) 1 180 1.0E-63 T 14-09-2016 IPR032349 Protein of unknown function DUF4865 AMK01_RS18015 7e360379da26157db8b035dacd9437e4 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 3.5E-6 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS18015 7e360379da26157db8b035dacd9437e4 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 3.5E-6 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS18015 7e360379da26157db8b035dacd9437e4 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 3.5E-6 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS18015 7e360379da26157db8b035dacd9437e4 107 SMART SM00418 9 88 9.2E-12 T 14-09-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK01_RS18015 7e360379da26157db8b035dacd9437e4 107 SUPERFAMILY SSF46785 7 101 8.35E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18015 7e360379da26157db8b035dacd9437e4 107 Pfam PF12840 Helix-turn-helix domain 10 68 5.9E-14 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18015 7e360379da26157db8b035dacd9437e4 107 Gene3D G3DSA:1.10.10.10 6 89 4.2E-23 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS18015 7e360379da26157db8b035dacd9437e4 107 PANTHER PTHR33154 10 100 1.6E-13 T 14-09-2016 AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1 15 1.3E-22 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 PRINTS PR00344 Bacterial sensor protein C-terminal signature 19 29 1.3E-22 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 PRINTS PR00344 Bacterial sensor protein C-terminal signature 34 52 1.3E-22 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 PRINTS PR00344 Bacterial sensor protein C-terminal signature 58 71 1.3E-22 T 14-09-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 SUPERFAMILY SSF55874 1 72 4.02E-27 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2 72 1.2E-20 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 SMART SM00387 2 74 2.2E-6 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 Gene3D G3DSA:3.30.565.10 1 73 5.5E-27 T 14-09-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK01_RS13700 5b152a910b0f9aede5e28cb09e9f1c84 83 PANTHER PTHR24423 1 73 2.6E-27 T 14-09-2016 AMK01_RS01410 ed9a8ae93fe5cf6d03783d2d7eb951dc 76 Pfam PF07362 Post-segregation antitoxin CcdA 6 76 1.8E-25 T 14-09-2016 IPR009956 Post-segregation antitoxin CcdA AMK01_RS14965 50f9be4c255baf9b6d2e14cf4a2bf920 79 Pfam PF11154 Protein of unknown function (DUF2934) 5 40 1.2E-13 T 14-09-2016 IPR021327 Protein of unknown function DUF2934 AMK01_RS18700 bc0223c80b184c337eea33d050bbd042 262 PANTHER PTHR35005:SF1 1 253 4.3E-42 T 14-09-2016 AMK01_RS18700 bc0223c80b184c337eea33d050bbd042 262 Pfam PF02633 Creatinine amidohydrolase 19 249 3.1E-54 T 14-09-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK01_RS18700 bc0223c80b184c337eea33d050bbd042 262 Gene3D G3DSA:3.40.50.10310 15 253 1.1E-67 T 14-09-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK01_RS18700 bc0223c80b184c337eea33d050bbd042 262 PANTHER PTHR35005 1 253 4.3E-42 T 14-09-2016 AMK01_RS18700 bc0223c80b184c337eea33d050bbd042 262 SUPERFAMILY SSF102215 19 253 2.88E-67 T 14-09-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 AMK01_RS03575 551778561382e6ea5c3f910f8c49669d 445 SUPERFAMILY SSF103088 336 442 3.79E-18 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS03575 551778561382e6ea5c3f910f8c49669d 445 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 20 70 4.4E-18 T 14-09-2016 IPR025713 Motility protein B, N-terminal domain AMK01_RS03575 551778561382e6ea5c3f910f8c49669d 445 PANTHER PTHR30329 244 442 1.6E-65 T 14-09-2016 AMK01_RS03575 551778561382e6ea5c3f910f8c49669d 445 PANTHER PTHR30329:SF2 8 86 1.6E-65 T 14-09-2016 AMK01_RS03575 551778561382e6ea5c3f910f8c49669d 445 PANTHER PTHR30329:SF2 244 442 1.6E-65 T 14-09-2016 AMK01_RS03575 551778561382e6ea5c3f910f8c49669d 445 Gene3D G3DSA:3.30.1330.60 335 442 6.4E-15 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS03575 551778561382e6ea5c3f910f8c49669d 445 Pfam PF00691 OmpA family 356 423 2.1E-7 T 14-09-2016 IPR006665 OmpA-like domain AMK01_RS03575 551778561382e6ea5c3f910f8c49669d 445 PANTHER PTHR30329 8 86 1.6E-65 T 14-09-2016 AMK01_RS05840 9131c9e7bf4f1412d6dd9d55723c9647 182 Pfam PF03729 Short repeat of unknown function (DUF308) 23 88 7.2E-13 T 14-09-2016 IPR005325 Protein of unknown function DUF308, membrane AMK01_RS05840 9131c9e7bf4f1412d6dd9d55723c9647 182 Pfam PF03729 Short repeat of unknown function (DUF308) 78 146 1.5E-7 T 14-09-2016 IPR005325 Protein of unknown function DUF308, membrane AMK01_RS05840 9131c9e7bf4f1412d6dd9d55723c9647 182 PANTHER PTHR34989:SF1 13 182 1.3E-29 T 14-09-2016 AMK01_RS05840 9131c9e7bf4f1412d6dd9d55723c9647 182 PANTHER PTHR34989 13 182 1.3E-29 T 14-09-2016 AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 Pfam PF01011 PQQ enzyme repeat 701 734 2.6E-6 T 14-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 Pfam PF01011 PQQ enzyme repeat 208 237 4.3E-5 T 14-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 Pfam PF01011 PQQ enzyme repeat 416 446 4.2E-7 T 14-09-2016 IPR002372 Pyrrolo-quinoline quinone repeat AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 SUPERFAMILY SSF50998 538 753 2.09E-135 T 14-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 SUPERFAMILY SSF50998 154 500 2.09E-135 T 14-09-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 PANTHER PTHR32303:SF4 557 770 8.6E-126 T 14-09-2016 AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 PANTHER PTHR32303 557 770 8.6E-126 T 14-09-2016 AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 PANTHER PTHR32303:SF4 157 486 8.6E-126 T 14-09-2016 AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 SMART SM00564 203 234 1.1 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 SMART SM00564 628 663 30.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 SMART SM00564 411 436 76.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 SMART SM00564 317 358 170.0 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 SMART SM00564 691 724 3.6E-5 T 14-09-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 7 768 1.2E-278 T 14-09-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 Gene3D G3DSA:2.140.10.10 141 513 7.9E-132 T 14-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 Gene3D G3DSA:2.140.10.10 549 771 7.9E-132 T 14-09-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AMK01_RS17445 659450989e97b7ee37b91a46e344837f 772 PANTHER PTHR32303 157 486 8.6E-126 T 14-09-2016 AMK01_RS02270 7b6e5a1a1c673252fb485680fe628a7f 139 PANTHER PTHR33653:SF1 1 137 1.7E-24 T 14-09-2016 AMK01_RS02270 7b6e5a1a1c673252fb485680fe628a7f 139 SUPERFAMILY SSF88723 1 136 4.49E-26 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS02270 7b6e5a1a1c673252fb485680fe628a7f 139 Gene3D G3DSA:3.40.50.1010 1 131 2.5E-19 T 14-09-2016 IPR029060 PIN domain-like AMK01_RS02270 7b6e5a1a1c673252fb485680fe628a7f 139 PANTHER PTHR33653 1 137 1.7E-24 T 14-09-2016 AMK01_RS02270 7b6e5a1a1c673252fb485680fe628a7f 139 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 132 9.442 T 14-09-2016 IPR022907 VapC family GO:0004540 AMK01_RS02270 7b6e5a1a1c673252fb485680fe628a7f 139 Pfam PF01850 PIN domain 2 125 1.0E-12 T 14-09-2016 IPR002716 PIN domain AMK01_RS10870 f495d9c4d357db39e6cbaa56e2fa8f91 142 Pfam PF16156 Domain of unknown function (DUF4864) 31 132 3.5E-34 T 14-09-2016 IPR032347 Protein of unknown function DUF4864 AMK01_RS18090 0d462d2564b0da348934fb1371372d4a 63 Pfam PF06698 Protein of unknown function (DUF1192) 5 62 3.6E-25 T 14-09-2016 IPR009579 Protein of unknown function DUF1192 AMK01_RS01655 e0621f12bf28642eeaa2312f6cbeeff1 176 Pfam PF01872 RibD C-terminal domain 3 157 8.4E-17 T 14-09-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMK01_RS01655 e0621f12bf28642eeaa2312f6cbeeff1 176 Gene3D G3DSA:3.40.430.10 3 174 2.9E-23 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS01655 e0621f12bf28642eeaa2312f6cbeeff1 176 PANTHER PTHR38011 2 176 1.4E-17 T 14-09-2016 AMK01_RS01655 e0621f12bf28642eeaa2312f6cbeeff1 176 SUPERFAMILY SSF53597 2 175 1.06E-24 T 14-09-2016 IPR024072 Dihydrofolate reductase-like domain AMK01_RS16500 8535f458629ba928397b45af9a939c34 392 Gene3D G3DSA:3.90.550.10 89 337 2.0E-41 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16500 8535f458629ba928397b45af9a939c34 392 PANTHER PTHR22916 89 392 6.6E-38 T 14-09-2016 AMK01_RS16500 8535f458629ba928397b45af9a939c34 392 SUPERFAMILY SSF53448 86 335 2.25E-50 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16500 8535f458629ba928397b45af9a939c34 392 Pfam PF00535 Glycosyl transferase family 2 90 260 9.5E-25 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS07290 d2fb20f924bdeb6778d597ca3950cf17 122 PANTHER PTHR38590:SF1 3 122 6.7E-42 T 14-09-2016 AMK01_RS07290 d2fb20f924bdeb6778d597ca3950cf17 122 Pfam PF04480 Protein of unknown function (DUF559) 10 116 9.1E-40 T 14-09-2016 IPR007569 Domain of unknown function DUF559 AMK01_RS07290 d2fb20f924bdeb6778d597ca3950cf17 122 SUPERFAMILY SSF52980 7 117 1.18E-26 T 14-09-2016 IPR011335 Restriction endonuclease type II-like AMK01_RS07290 d2fb20f924bdeb6778d597ca3950cf17 122 Gene3D G3DSA:3.40.960.10 73 115 5.1E-5 T 14-09-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMK01_RS07290 d2fb20f924bdeb6778d597ca3950cf17 122 PANTHER PTHR38590 3 122 6.7E-42 T 14-09-2016 AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 Pfam PF00563 EAL domain 406 628 6.4E-66 T 14-09-2016 IPR001633 EAL domain AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 SMART SM00267 207 381 1.8E-40 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 SMART SM00052 391 633 1.3E-80 T 14-09-2016 IPR001633 EAL domain AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 PANTHER PTHR33121:SF13 378 651 1.1E-61 T 14-09-2016 AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 SUPERFAMILY SSF55073 227 382 3.69E-36 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 Gene3D G3DSA:3.20.20.450 405 637 7.0E-78 T 14-09-2016 IPR001633 EAL domain AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 PANTHER PTHR33121 378 651 1.1E-61 T 14-09-2016 AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 374 5.9E-33 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 SUPERFAMILY SSF141868 406 638 3.66E-75 T 14-09-2016 IPR001633 EAL domain AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 Gene3D G3DSA:3.30.70.270 224 386 3.7E-40 T 14-09-2016 AMK01_RS03020 a355535e6c0e09332647f2fc9ef9906f 653 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 379 1.3E-28 T 14-09-2016 IPR000160 GGDEF domain AMK01_RS15370 cc7ff06214e122122cab1d3a4af90c9e 113 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 7 112 6.9E-46 T 14-09-2016 IPR008231 Probable chaperone CsaA AMK01_RS15370 cc7ff06214e122122cab1d3a4af90c9e 113 SUPERFAMILY SSF50249 5 112 6.86E-30 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS15370 cc7ff06214e122122cab1d3a4af90c9e 113 PANTHER PTHR11586 1 109 6.6E-34 T 14-09-2016 AMK01_RS15370 cc7ff06214e122122cab1d3a4af90c9e 113 Gene3D G3DSA:2.40.50.140 2 112 1.7E-32 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS15370 cc7ff06214e122122cab1d3a4af90c9e 113 Pfam PF01588 Putative tRNA binding domain 15 110 8.9E-11 T 14-09-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AMK01_RS19990 0744cf6416fb2857772868d9a8ca08c3 102 Gene3D G3DSA:3.30.70.1060 19 92 4.0E-8 T 14-09-2016 AMK01_RS19990 0744cf6416fb2857772868d9a8ca08c3 102 Pfam PF03795 YCII-related domain 21 92 4.3E-8 T 14-09-2016 IPR005545 YCII-related AMK01_RS19990 0744cf6416fb2857772868d9a8ca08c3 102 SUPERFAMILY SSF54909 20 92 2.14E-8 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS15550 6d84c9aeaf9aa8a5f4a00794777c9d90 216 SUPERFAMILY SSF55811 51 211 3.93E-36 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS15550 6d84c9aeaf9aa8a5f4a00794777c9d90 216 Gene3D G3DSA:3.90.79.10 42 215 6.5E-45 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS15550 6d84c9aeaf9aa8a5f4a00794777c9d90 216 Pfam PF00293 NUDIX domain 56 169 3.4E-14 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS15550 6d84c9aeaf9aa8a5f4a00794777c9d90 216 PANTHER PTHR12992 5 215 5.6E-49 T 14-09-2016 AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 Pfam PF14497 Glutathione S-transferase, C-terminal domain 120 200 7.3E-5 T 14-09-2016 IPR004046 Glutathione S-transferase, C-terminal AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 PANTHER PTHR11260 1 207 7.6E-82 T 14-09-2016 AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 5 208 4.9E-83 T 14-09-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 Gene3D G3DSA:1.20.1050.10 92 207 1.0E-40 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 SUPERFAMILY SSF47616 83 208 4.26E-27 T 14-09-2016 IPR010987 Glutathione S-transferase, C-terminal-like AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 SUPERFAMILY SSF52833 2 86 1.36E-27 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 77 1.4E-19 T 14-09-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 PANTHER PTHR11260:SF289 1 207 7.6E-82 T 14-09-2016 AMK01_RS08820 64f35772656fe7e47fc9fc21a21dfa68 210 Gene3D G3DSA:3.40.30.10 5 91 2.1E-30 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS04615 70ae94c365267dc10419f42255183ea0 250 PANTHER PTHR11941:SF17 3 250 1.9E-64 T 14-09-2016 AMK01_RS04615 70ae94c365267dc10419f42255183ea0 250 PANTHER PTHR11941 3 250 1.9E-64 T 14-09-2016 AMK01_RS04615 70ae94c365267dc10419f42255183ea0 250 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 248 9.2E-46 T 14-09-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AMK01_RS04615 70ae94c365267dc10419f42255183ea0 250 SUPERFAMILY SSF52096 2 249 3.45E-62 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS04615 70ae94c365267dc10419f42255183ea0 250 Gene3D G3DSA:3.90.226.10 4 249 1.9E-60 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS01765 5749951e6afad28147926ac830fc1c5d 199 Gene3D G3DSA:3.40.50.150 29 174 1.2E-18 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS01765 5749951e6afad28147926ac830fc1c5d 199 SUPERFAMILY SSF53335 20 138 1.82E-21 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS01765 5749951e6afad28147926ac830fc1c5d 199 Pfam PF13649 Methyltransferase domain 58 150 1.5E-7 T 14-09-2016 AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 Gene3D G3DSA:3.40.50.720 3 254 2.8E-73 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 SUPERFAMILY SSF51735 7 255 1.26E-68 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.5E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.5E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 3.5E-8 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 4.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 4.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 4.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 4.1E-30 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 7.7E-52 T 14-09-2016 AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PANTHER PTHR24322 160 191 1.5E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS05380 42636319693f7847574e98d4a8f58379 255 PANTHER PTHR24322 12 144 1.5E-43 T 14-09-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK01_RS12645 606f4a2b912cc67fad0f81bb243e0100 236 SUPERFAMILY SSF55785 130 233 4.54E-15 T 14-09-2016 IPR000014 PAS domain AMK01_RS12645 606f4a2b912cc67fad0f81bb243e0100 236 Pfam PF08448 PAS fold 132 234 1.0E-12 T 14-09-2016 IPR013656 PAS fold-4 AMK01_RS12645 606f4a2b912cc67fad0f81bb243e0100 236 Gene3D G3DSA:3.30.450.20 129 233 2.2E-13 T 14-09-2016 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 Gene3D G3DSA:1.10.3720.10 264 395 1.2E-44 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 Gene3D G3DSA:1.10.3720.10 91 159 1.2E-44 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 SUPERFAMILY SSF161098 185 381 3.38E-27 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 154 1.1E-15 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 SUPERFAMILY SSF161098 92 159 1.01E-11 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 PANTHER PTHR30085 1 180 2.1E-135 T 14-09-2016 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 PANTHER PTHR30085 259 400 2.1E-135 T 14-09-2016 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 PANTHER PTHR30085:SF1 1 180 2.1E-135 T 14-09-2016 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 PANTHER PTHR30085:SF1 259 400 2.1E-135 T 14-09-2016 AMK01_RS09595 3270e3497f007ee6d01bfea21589907a 400 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 233 395 7.6E-11 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS07445 edec3aec85211ae5d484b7d128ce8e69 393 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 353 3.7E-59 T 14-09-2016 IPR005495 Permease LptG/LptF-related GO:0016021 AMK01_RS07445 edec3aec85211ae5d484b7d128ce8e69 393 PANTHER PTHR33529:SF2 1 381 8.9E-49 T 14-09-2016 AMK01_RS07445 edec3aec85211ae5d484b7d128ce8e69 393 PANTHER PTHR33529 1 381 8.9E-49 T 14-09-2016 AMK01_RS12485 3a9c94aa9228335a247fcfbb617add63 127 PANTHER PTHR34299:SF1 1 126 1.5E-18 T 14-09-2016 AMK01_RS12485 3a9c94aa9228335a247fcfbb617add63 127 Gene3D G3DSA:1.10.3830.10 8 124 1.7E-28 T 14-09-2016 AMK01_RS12485 3a9c94aa9228335a247fcfbb617add63 127 Pfam PF01219 Prokaryotic diacylglycerol kinase 20 119 1.8E-20 T 14-09-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 AMK01_RS12485 3a9c94aa9228335a247fcfbb617add63 127 PANTHER PTHR34299 1 126 1.5E-18 T 14-09-2016 AMK01_RS03615 0a055273c57274badf39b42b7a79b5c0 115 Pfam PF07309 Flagellar protein FlaF 2 114 2.7E-33 T 14-09-2016 IPR010845 Flagellar FlaF GO:0044781 AMK01_RS11005 0606fda6cc8909f59968b3eb4e3a2ab7 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-09-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK01_RS11005 0606fda6cc8909f59968b3eb4e3a2ab7 477 Gene3D G3DSA:3.40.605.10 6 262 2.6E-93 T 14-09-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS11005 0606fda6cc8909f59968b3eb4e3a2ab7 477 Gene3D G3DSA:3.40.309.10 263 448 1.0E-60 T 14-09-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK01_RS11005 0606fda6cc8909f59968b3eb4e3a2ab7 477 SUPERFAMILY SSF53720 4 474 4.32E-159 T 14-09-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK01_RS11005 0606fda6cc8909f59968b3eb4e3a2ab7 477 Pfam PF00171 Aldehyde dehydrogenase family 15 473 6.0E-155 T 14-09-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK01_RS11005 0606fda6cc8909f59968b3eb4e3a2ab7 477 PANTHER PTHR11699 5 475 2.4E-194 T 14-09-2016 AMK01_RS03145 24f6e139feeac5ef3c922547b6660884 146 Gene3D G3DSA:2.30.110.10 1 125 5.9E-4 T 14-09-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK01_RS13555 4ad969e3f5a7251f79e0f9205ff7503a 344 Pfam PF04116 Fatty acid hydroxylase superfamily 178 307 6.2E-19 T 14-09-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 AMK01_RS13555 4ad969e3f5a7251f79e0f9205ff7503a 344 PANTHER PTHR11863 154 333 1.5E-14 T 14-09-2016 AMK01_RS13555 4ad969e3f5a7251f79e0f9205ff7503a 344 PANTHER PTHR11863 17 29 1.5E-14 T 14-09-2016 AMK01_RS18650 f35bbfca2056352a69397144d3967daa 74 Gene3D G3DSA:1.20.5.160 1 45 2.7E-6 T 14-09-2016 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMK01_RS18650 f35bbfca2056352a69397144d3967daa 74 SUPERFAMILY SSF81469 11 49 3.53E-12 T 14-09-2016 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMK01_RS18650 f35bbfca2056352a69397144d3967daa 74 Pfam PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV 4 49 5.5E-23 T 14-09-2016 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMK01_RS16605 a6d73a718184209346529ba4cd7a5234 273 SUPERFAMILY SSF53448 4 241 5.06E-8 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS10820 794748a18892709b45d7020fd44b96e4 188 Pfam PF10754 Protein of unknown function (DUF2569) 38 177 5.0E-17 T 14-09-2016 IPR019690 Protein of unknown function DUF2569 AMK01_RS02745 4c581b4d44edb8be975de9984ddfb77f 177 Pfam PF07750 GcrA cell cycle regulator 1 172 2.9E-64 T 14-09-2016 IPR011681 GcrA cell cycle regulator AMK01_RS03975 a4c3d9ae7dde1140f2a50249fd56a45f 321 SUPERFAMILY SSF53756 15 317 1.96E-10 T 14-09-2016 AMK01_RS03975 a4c3d9ae7dde1140f2a50249fd56a45f 321 Gene3D G3DSA:3.40.50.2000 13 67 5.4E-5 T 14-09-2016 AMK01_RS03975 a4c3d9ae7dde1140f2a50249fd56a45f 321 Gene3D G3DSA:3.40.50.2000 145 273 1.6E-8 T 14-09-2016 AMK01_RS16985 5af57386be714b8ed2322dd806073cf1 223 TIGRFAM TIGR02117 chp_urease_rgn: conserved hypothetical protein 12 219 1.4E-84 T 14-09-2016 IPR011727 Conserved hypothetical protein CHP02117 AMK01_RS16985 5af57386be714b8ed2322dd806073cf1 223 Pfam PF09601 Protein of unknown function (DUF2459) 44 211 2.4E-48 T 14-09-2016 IPR011727 Conserved hypothetical protein CHP02117 AMK01_RS18355 dd58be7b5b8737bec6bc49d1db558bde 151 PANTHER PTHR33507 5 151 1.2E-37 T 14-09-2016 AMK01_RS18355 dd58be7b5b8737bec6bc49d1db558bde 151 PANTHER PTHR33507:SF3 5 151 1.2E-37 T 14-09-2016 AMK01_RS18355 dd58be7b5b8737bec6bc49d1db558bde 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 150 4.3E-32 T 14-09-2016 IPR002810 NfeD-like, C-terminal domain AMK01_RS18355 dd58be7b5b8737bec6bc49d1db558bde 151 Gene3D G3DSA:2.40.50.140 97 151 1.4E-10 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS19615 54834a9ecd6bda258a1d8c0a0313bc1b 259 Pfam PF11306 Protein of unknown function (DUF3108) 16 255 2.3E-32 T 14-09-2016 IPR021457 Protein of unknown function DUF3108 AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 PANTHER PTHR36453 565 605 4.7E-20 T 14-09-2016 AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 PANTHER PTHR36453:SF1 565 605 4.7E-20 T 14-09-2016 AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 PANTHER PTHR36453 101 549 4.7E-20 T 14-09-2016 AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SUPERFAMILY SSF51126 396 620 1.41E-31 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SUPERFAMILY SSF51126 66 165 1.41E-31 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SUPERFAMILY SSF51126 336 360 1.41E-31 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 PANTHER PTHR36453:SF1 101 549 4.7E-20 T 14-09-2016 AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 Pfam PF13229 Right handed beta helix region 572 648 2.3E-6 T 14-09-2016 AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 Pfam PF13229 Right handed beta helix region 376 537 5.6E-15 T 14-09-2016 AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 Gene3D G3DSA:2.160.20.10 568 624 4.6E-33 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 Gene3D G3DSA:2.160.20.10 257 426 4.6E-33 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 Gene3D G3DSA:2.160.20.10 105 147 4.6E-33 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 Gene3D G3DSA:2.160.20.10 461 518 4.6E-33 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 404 426 0.47 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 434 461 160.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 382 403 49.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 492 519 870.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 462 484 2100.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 595 617 170.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 628 649 3900.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 657 703 5200.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS06920 5ccf2c6e176d7cc76fe2cc654776ff87 709 SMART SM00710 573 594 86.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS01835 a96d9f0498479bf865aa4164d985231c 156 TIGRFAM TIGR00576 dut: dUTP diphosphatase 19 155 8.5E-53 T 14-09-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AMK01_RS01835 a96d9f0498479bf865aa4164d985231c 156 Gene3D G3DSA:2.70.40.10 17 156 1.1E-52 T 14-09-2016 IPR029054 dUTPase-like AMK01_RS01835 a96d9f0498479bf865aa4164d985231c 156 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 9 156 34.044 T 14-09-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 AMK01_RS01835 a96d9f0498479bf865aa4164d985231c 156 PANTHER PTHR11241 19 156 5.0E-50 T 14-09-2016 AMK01_RS01835 a96d9f0498479bf865aa4164d985231c 156 SUPERFAMILY SSF51283 14 156 1.57E-48 T 14-09-2016 IPR029054 dUTPase-like AMK01_RS01835 a96d9f0498479bf865aa4164d985231c 156 Pfam PF00692 dUTPase 24 155 6.2E-29 T 14-09-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AMK01_RS03380 e8abda999b45be9417c88a6916a0b80f 98 Gene3D G3DSA:3.30.750.24 7 87 3.1E-7 T 14-09-2016 IPR002645 STAS domain AMK01_RS03380 e8abda999b45be9417c88a6916a0b80f 98 Pfam PF13466 STAS domain 10 86 1.5E-15 T 14-09-2016 IPR002645 STAS domain AMK01_RS03380 e8abda999b45be9417c88a6916a0b80f 98 SUPERFAMILY SSF52091 8 87 1.96E-7 T 14-09-2016 IPR002645 STAS domain AMK01_RS04785 a15fbeed0a867d5b9b674e71bdeee4fc 152 Pfam PF16998 17 kDa outer membrane surface antigen 37 150 1.6E-49 T 14-09-2016 IPR032635 Surface antigen domain AMK01_RS04875 04c93e02015ab8bf063fb114887c11e0 213 Pfam PF07931 Chloramphenicol phosphotransferase-like protein 8 196 2.0E-50 T 14-09-2016 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK01_RS04875 04c93e02015ab8bf063fb114887c11e0 213 Gene3D G3DSA:3.40.50.300 8 197 9.2E-55 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04875 04c93e02015ab8bf063fb114887c11e0 213 SUPERFAMILY SSF52540 6 198 1.5E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS04875 04c93e02015ab8bf063fb114887c11e0 213 PIRSF PIRSF007531 1 211 1.2E-54 T 14-09-2016 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK01_RS18985 ffe091e86d6b83de2c229358a84240aa 237 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 10 214 3.2E-24 T 14-09-2016 AMK01_RS22545 80cefb54966553c9d7228e9c09b3adbf 159 Pfam PF04443 Acyl-protein synthetase, LuxE 19 156 8.1E-30 T 14-09-2016 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723|UniPathway: UPA00569 AMK01_RS18915 f49db5c4f32e80a70e74a432b341ef18 270 PANTHER PTHR30193:SF20 1 270 1.3E-65 T 14-09-2016 AMK01_RS18915 f49db5c4f32e80a70e74a432b341ef18 270 SUPERFAMILY SSF161098 12 263 3.92E-49 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS18915 f49db5c4f32e80a70e74a432b341ef18 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 256 1.5E-12 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS18915 f49db5c4f32e80a70e74a432b341ef18 270 PANTHER PTHR30193 1 270 1.3E-65 T 14-09-2016 AMK01_RS18915 f49db5c4f32e80a70e74a432b341ef18 270 Gene3D G3DSA:1.10.3720.10 13 261 8.0E-49 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS20175 0bcda6c4cb6ba565a8409fddc961d8a7 213 PIRSF PIRSF006324 4 212 6.1E-50 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS20175 0bcda6c4cb6ba565a8409fddc961d8a7 213 PANTHER PTHR30086 5 209 1.1E-42 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS20175 0bcda6c4cb6ba565a8409fddc961d8a7 213 Pfam PF01810 LysE type translocator 19 209 4.0E-32 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.3E-23 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 SMART SM00357 3 69 2.4E-23 T 14-09-2016 IPR011129 Cold shock protein GO:0003676 AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 Gene3D G3DSA:2.40.50.140 1 67 3.5E-26 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 SUPERFAMILY SSF50249 1 67 2.57E-21 T 14-09-2016 IPR012340 Nucleic acid-binding, OB-fold AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-09-2016 IPR019844 Cold-shock conserved site AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 PIRSF PIRSF002599 1 68 5.5E-21 T 14-09-2016 IPR012156 Cold shock, CspA GO:0003676 AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 PRINTS PR00050 Cold shock protein signature 40 58 7.6E-14 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 PRINTS PR00050 Cold shock protein signature 4 19 7.6E-14 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 PRINTS PR00050 Cold shock protein signature 25 34 7.6E-14 T 14-09-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK01_RS02970 d3ed3c6fcf7ec8c34ec704dafbb0f911 69 PANTHER PTHR11544 1 57 2.0E-20 T 14-09-2016 AMK01_RS10370 3994b6419a3a65030e4bc26ea0019025 152 Pfam PF07883 Cupin domain 40 107 2.2E-20 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS10370 3994b6419a3a65030e4bc26ea0019025 152 SUPERFAMILY SSF51182 20 145 2.57E-30 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS10370 3994b6419a3a65030e4bc26ea0019025 152 PANTHER PTHR36440 6 150 1.9E-28 T 14-09-2016 AMK01_RS10370 3994b6419a3a65030e4bc26ea0019025 152 Gene3D G3DSA:2.60.120.10 11 148 1.0E-31 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS10370 3994b6419a3a65030e4bc26ea0019025 152 PANTHER PTHR36440:SF1 6 150 1.9E-28 T 14-09-2016 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.4E-13 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 Gene3D G3DSA:3.40.50.2300 59 175 3.7E-35 T 14-09-2016 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 SUPERFAMILY SSF47413 6 65 3.09E-14 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 PANTHER PTHR30146 6 340 9.4E-103 T 14-09-2016 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 Pfam PF13377 Periplasmic binding protein-like domain 172 333 2.9E-36 T 14-09-2016 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 Gene3D G3DSA:1.10.260.40 7 58 1.3E-19 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 Gene3D G3DSA:3.40.50.2300 176 313 1.0E-48 T 14-09-2016 AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 SUPERFAMILY SSF53822 66 338 7.07E-70 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS18835 cef6817d99c0393ac459dfd6f6ef6a9b 343 SMART SM00354 6 76 3.4E-23 T 14-09-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK01_RS13875 5e1fb80c35a0dba32d488c1862299077 132 Pfam PF07366 SnoaL-like polyketide cyclase 8 128 2.7E-35 T 14-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK01_RS13875 5e1fb80c35a0dba32d488c1862299077 132 Gene3D G3DSA:3.10.450.50 7 128 4.9E-17 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS13875 5e1fb80c35a0dba32d488c1862299077 132 SUPERFAMILY SSF54427 4 128 2.82E-30 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS06180 54cf4eddf7813b060ffec8f296935b28 113 Gene3D G3DSA:3.10.450.50 1 111 8.7E-12 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS06180 54cf4eddf7813b060ffec8f296935b28 113 Pfam PF12680 SnoaL-like domain 11 104 6.9E-8 T 14-09-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK01_RS06180 54cf4eddf7813b060ffec8f296935b28 113 SUPERFAMILY SSF54427 1 110 2.29E-15 T 14-09-2016 IPR032710 NTF2-like domain AMK01_RS06745 7c873814014201ff0b32d9f4ccfc2d4b 320 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 25 290 1.2E-14 T 14-09-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AMK01_RS15605 4f6471c624b80cddadc6e6dfd77c7a9a 186 Gene3D G3DSA:1.25.40.10 71 180 1.6E-14 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS15605 4f6471c624b80cddadc6e6dfd77c7a9a 186 SUPERFAMILY SSF48452 65 178 9.66E-16 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS05725 3190b4cdb76ca11170678673ae480d0d 313 SUPERFAMILY SSF75005 125 300 4.85E-15 T 14-09-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AMK01_RS05725 3190b4cdb76ca11170678673ae480d0d 313 Gene3D G3DSA:2.115.10.20 159 294 2.2E-5 T 14-09-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AMK01_RS15180 73de0b1d43cea52a0720cc53e9661980 410 SUPERFAMILY SSF47781 308 380 4.22E-10 T 14-09-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK01_RS15180 73de0b1d43cea52a0720cc53e9661980 410 PANTHER PTHR21180 136 406 1.5E-111 T 14-09-2016 AMK01_RS15180 73de0b1d43cea52a0720cc53e9661980 410 Gene3D G3DSA:1.10.150.320 324 373 1.2E-5 T 14-09-2016 AMK01_RS15180 73de0b1d43cea52a0720cc53e9661980 410 Gene3D G3DSA:3.20.20.70 53 197 1.2E-8 T 14-09-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK01_RS15180 73de0b1d43cea52a0720cc53e9661980 410 SUPERFAMILY SSF102114 47 203 1.83E-12 T 14-09-2016 AMK01_RS15180 73de0b1d43cea52a0720cc53e9661980 410 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 398 2.0E-170 T 14-09-2016 IPR023874 DNA modification/repair radical SAM protein, putative AMK01_RS15180 73de0b1d43cea52a0720cc53e9661980 410 PANTHER PTHR21180:SF9 136 406 1.5E-111 T 14-09-2016 IPR023874 DNA modification/repair radical SAM protein, putative AMK01_RS14800 29ebf10417e054a3ae83627e3b4846e5 232 PIRSF PIRSF009320 1 228 6.9E-38 T 14-09-2016 AMK01_RS14800 29ebf10417e054a3ae83627e3b4846e5 232 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 177 2.3E-22 T 14-09-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK01_RS14800 29ebf10417e054a3ae83627e3b4846e5 232 Gene3D G3DSA:3.40.50.300 1 218 5.9E-31 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14800 29ebf10417e054a3ae83627e3b4846e5 232 SUPERFAMILY SSF52540 1 218 3.78E-33 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS14800 29ebf10417e054a3ae83627e3b4846e5 232 PANTHER PTHR13696 1 226 4.0E-20 T 14-09-2016 AMK01_RS16445 ee7eb4c55a29cfd983554731fce6a514 180 Gene3D G3DSA:3.40.630.30 4 179 1.9E-28 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS16445 ee7eb4c55a29cfd983554731fce6a514 180 Pfam PF00583 Acetyltransferase (GNAT) family 63 155 6.6E-11 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS16445 ee7eb4c55a29cfd983554731fce6a514 180 PANTHER PTHR23091 99 178 2.0E-12 T 14-09-2016 AMK01_RS16445 ee7eb4c55a29cfd983554731fce6a514 180 PANTHER PTHR23091 9 78 2.0E-12 T 14-09-2016 AMK01_RS16445 ee7eb4c55a29cfd983554731fce6a514 180 SUPERFAMILY SSF55729 7 178 9.12E-25 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS18930 1fadc11ff24dea3a1f6207a6c7760bf4 147 Pfam PF07681 DoxX 15 93 5.2E-11 T 14-09-2016 IPR032808 DoxX family AMK01_RS18930 1fadc11ff24dea3a1f6207a6c7760bf4 147 PANTHER PTHR33452 6 135 2.7E-17 T 14-09-2016 AMK01_RS18930 1fadc11ff24dea3a1f6207a6c7760bf4 147 PANTHER PTHR33452:SF6 6 135 2.7E-17 T 14-09-2016 AMK01_RS05205 80af0714f91ba8026272b7a7e6261024 228 PANTHER PTHR31088 1 224 7.8E-28 T 14-09-2016 AMK01_RS05205 80af0714f91ba8026272b7a7e6261024 228 PANTHER PTHR31088:SF0 1 224 7.8E-28 T 14-09-2016 AMK01_RS05205 80af0714f91ba8026272b7a7e6261024 228 Pfam PF04012 PspA/IM30 family 2 223 1.3E-23 T 14-09-2016 IPR007157 PspA/IM30 AMK01_RS16540 0d279370f54f28ad52022068e426ea18 395 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 50 374 2.0E-68 T 14-09-2016 IPR003776 YcaO-like domain AMK01_RS16540 0d279370f54f28ad52022068e426ea18 395 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 2 295 9.8E-49 T 14-09-2016 IPR003776 YcaO-like domain AMK01_RS16540 0d279370f54f28ad52022068e426ea18 395 PANTHER PTHR37809 1 393 1.2E-42 T 14-09-2016 AMK01_RS09080 64902574acb946eddd53587999da2d31 67 SUPERFAMILY SSF69047 1 66 2.75E-26 T 14-09-2016 IPR008462 CsbD-like AMK01_RS09080 64902574acb946eddd53587999da2d31 67 Gene3D G3DSA:1.10.1470.10 1 65 3.8E-31 T 14-09-2016 IPR008462 CsbD-like AMK01_RS09080 64902574acb946eddd53587999da2d31 67 PIRSF PIRSF039008 1 66 2.9E-31 T 14-09-2016 IPR026042 Stress response protein YjbJ AMK01_RS09080 64902574acb946eddd53587999da2d31 67 PANTHER PTHR34977 1 67 6.9E-16 T 14-09-2016 AMK01_RS09080 64902574acb946eddd53587999da2d31 67 Pfam PF05532 CsbD-like 4 54 6.6E-23 T 14-09-2016 IPR008462 CsbD-like AMK01_RS03140 3e85769558690e471d8476984f080449 153 PANTHER PTHR36440 26 151 4.9E-15 T 14-09-2016 AMK01_RS03140 3e85769558690e471d8476984f080449 153 PANTHER PTHR36440:SF1 26 151 4.9E-15 T 14-09-2016 AMK01_RS03140 3e85769558690e471d8476984f080449 153 SUPERFAMILY SSF51182 5 148 1.87E-25 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS03140 3e85769558690e471d8476984f080449 153 Pfam PF07883 Cupin domain 42 109 3.1E-17 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS03140 3e85769558690e471d8476984f080449 153 Gene3D G3DSA:2.60.120.10 21 147 8.4E-32 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS10040 15719501607a784935109c63e1eaf2f7 104 Pfam PF11011 Protein of unknown function (DUF2849) 4 90 8.2E-30 T 14-09-2016 IPR021270 Protein of unknown function DUF2849 AMK01_RS05020 6d542801d8a4d3b16a9d7407ce61a67e 267 Pfam PF12686 Protein of unknown function (DUF3800) 6 213 3.7E-9 T 14-09-2016 IPR024524 Protein of unknown function DUF3800 AMK01_RS16075 30ac6c9ff41cc4061dce93d8ad937eeb 313 PANTHER PTHR34595 1 309 2.6E-87 T 14-09-2016 AMK01_RS16075 30ac6c9ff41cc4061dce93d8ad937eeb 313 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 309 1.4E-86 T 14-09-2016 IPR007296 Domain of unknown function DUF403 AMK01_RS18045 02a9e268be94f2201140ece15e9e9d8f 91 Pfam PF13747 Domain of unknown function (DUF4164) 6 91 2.5E-33 T 14-09-2016 IPR025310 Protein of unknown function DUF4164 AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SUPERFAMILY SSF51126 22 360 5.72E-45 T 14-09-2016 IPR011050 Pectin lyase fold/virulence factor AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00710 268 289 540.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00710 90 112 35.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00710 163 188 24.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00710 113 139 6900.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00710 216 237 610.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00710 140 162 0.18 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00710 238 264 61.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00710 297 319 2100.0 T 14-09-2016 IPR006626 Parallel beta-helix repeat AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 Pfam PF13229 Right handed beta helix region 156 329 1.7E-15 T 14-09-2016 AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00722 43 182 0.0025 T 14-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 SMART SM00722 198 356 11.0 T 14-09-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AMK01_RS16660 83f6b8c3a8e5f57836f2ccfa0bbd3f3a 523 Gene3D G3DSA:2.160.20.10 34 364 7.7E-29 T 14-09-2016 IPR012334 Pectin lyase fold AMK01_RS19455 52bf1660ef88bffd9d7d0dca735edc2f 185 SMART SM00507 81 131 3.1E-12 T 14-09-2016 IPR003615 HNH nuclease AMK01_RS19455 52bf1660ef88bffd9d7d0dca735edc2f 185 PANTHER PTHR33877 13 185 4.6E-75 T 14-09-2016 AMK01_RS19455 52bf1660ef88bffd9d7d0dca735edc2f 185 PANTHER PTHR33877:SF2 13 185 4.6E-75 T 14-09-2016 AMK01_RS19455 52bf1660ef88bffd9d7d0dca735edc2f 185 Pfam PF14279 HNH endonuclease 94 143 1.3E-15 T 14-09-2016 IPR029471 HNH endonuclease 5 AMK01_RS12810 668f578b263e9b274f13d36259f4c757 61 Pfam PF11450 Protein of unknwon function (DUF3008) 3 59 4.9E-31 T 14-09-2016 IPR021553 Protein of unknwon function DUF3008 AMK01_RS17745 35c190beb52f720679d5265a83cf2f18 69 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 21 69 8.6E-14 T 14-09-2016 IPR012667 Cobalt transporter subunit CbtB, putative AMK01_RS27290 180fa2190af75c8e994a21ecb0d909d8 297 Gene3D G3DSA:2.170.170.11 148 185 2.0E-49 T 14-09-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS27290 180fa2190af75c8e994a21ecb0d909d8 297 Gene3D G3DSA:2.170.170.11 3 104 2.0E-49 T 14-09-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS27290 180fa2190af75c8e994a21ecb0d909d8 297 Gene3D G3DSA:3.20.20.360 105 146 6.9E-64 T 14-09-2016 AMK01_RS27290 180fa2190af75c8e994a21ecb0d909d8 297 Gene3D G3DSA:3.20.20.360 186 297 6.9E-64 T 14-09-2016 AMK01_RS27290 180fa2190af75c8e994a21ecb0d909d8 297 Pfam PF01274 Malate synthase 83 296 8.7E-69 T 14-09-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS27290 180fa2190af75c8e994a21ecb0d909d8 297 SUPERFAMILY SSF51645 2 297 1.7E-106 T 14-09-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS09615 7e1a646a461684bb2b6a834b46c614ab 81 Gene3D G3DSA:2.60.260.40 1 80 6.0E-30 T 14-09-2016 IPR019401 Zinc finger, CHCC-type AMK01_RS09615 7e1a646a461684bb2b6a834b46c614ab 81 Pfam PF10276 Zinc-finger domain 24 58 7.2E-11 T 14-09-2016 IPR019401 Zinc finger, CHCC-type AMK01_RS05920 242a74af7f3622709a1ab39f0faaba6e 71 Pfam PF11160 Protein of unknown function (DUF2945) 7 67 4.3E-23 T 14-09-2016 IPR021331 Protein of unknown function DUF2945 AMK01_RS04925 5b727190c6594e29bd4dfb43785e24cf 267 Pfam PF11412 Disulphide bond corrector protein DsbC 40 144 5.4E-16 T 14-09-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMK01_RS02610 5570c66c2558f40b9756c155c2bcb84b 388 SUPERFAMILY SSF161098 181 371 4.32E-32 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02610 5570c66c2558f40b9756c155c2bcb84b 388 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 199 377 2.9E-13 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02610 5570c66c2558f40b9756c155c2bcb84b 388 PANTHER PTHR30177 93 383 5.5E-73 T 14-09-2016 AMK01_RS02610 5570c66c2558f40b9756c155c2bcb84b 388 Gene3D G3DSA:1.10.3720.10 139 368 1.7E-26 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02610 5570c66c2558f40b9756c155c2bcb84b 388 PANTHER PTHR30177:SF8 93 383 5.5E-73 T 14-09-2016 AMK01_RS05245 3d7b541208e099609f941a97e0080306 131 PANTHER PTHR33204:SF15 8 127 1.9E-38 T 14-09-2016 AMK01_RS05245 3d7b541208e099609f941a97e0080306 131 Gene3D G3DSA:1.10.10.10 15 129 1.0E-41 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05245 3d7b541208e099609f941a97e0080306 131 PANTHER PTHR33204 8 127 1.9E-38 T 14-09-2016 AMK01_RS05245 3d7b541208e099609f941a97e0080306 131 SUPERFAMILY SSF46785 21 126 1.5E-30 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS05245 3d7b541208e099609f941a97e0080306 131 Pfam PF01638 HxlR-like helix-turn-helix 31 117 2.3E-28 T 14-09-2016 IPR002577 Helix-turn-helix, HxlR type AMK01_RS17150 f0bf6c924eee2c32566ef7063092eab1 120 SUPERFAMILY SSF52172 2 113 2.28E-17 T 14-09-2016 IPR011006 CheY-like superfamily AMK01_RS17150 f0bf6c924eee2c32566ef7063092eab1 120 SMART SM00448 2 113 2.5E-7 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17150 f0bf6c924eee2c32566ef7063092eab1 120 Pfam PF00072 Response regulator receiver domain 5 111 5.5E-13 T 14-09-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK01_RS17150 f0bf6c924eee2c32566ef7063092eab1 120 Gene3D G3DSA:3.40.50.2300 1 112 1.5E-17 T 14-09-2016 AMK01_RS19610 cd8ac50081b84cd3756160242f0816c6 296 Pfam PF00892 EamA-like transporter family 149 279 3.6E-9 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS19610 cd8ac50081b84cd3756160242f0816c6 296 Pfam PF00892 EamA-like transporter family 7 135 1.3E-15 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS19610 cd8ac50081b84cd3756160242f0816c6 296 PANTHER PTHR12715 4 252 3.8E-58 T 14-09-2016 AMK01_RS19610 cd8ac50081b84cd3756160242f0816c6 296 PANTHER PTHR12715:SF7 4 252 3.8E-58 T 14-09-2016 AMK01_RS19610 cd8ac50081b84cd3756160242f0816c6 296 SUPERFAMILY SSF103481 41 138 1.09E-11 T 14-09-2016 AMK01_RS19610 cd8ac50081b84cd3756160242f0816c6 296 SUPERFAMILY SSF103481 189 280 1.06E-5 T 14-09-2016 AMK01_RS08930 63c1aded361a6a26c2c518522b6b22c0 133 Pfam PF07238 PilZ domain 10 96 4.6E-8 T 14-09-2016 IPR009875 PilZ domain GO:0035438 AMK01_RS08930 63c1aded361a6a26c2c518522b6b22c0 133 SUPERFAMILY SSF141371 10 85 2.55E-8 T 14-09-2016 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 SUPERFAMILY SSF161111 187 255 3.14E-45 T 14-09-2016 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 SUPERFAMILY SSF161111 26 157 3.14E-45 T 14-09-2016 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 PANTHER PTHR11562:SF40 170 325 3.9E-133 T 14-09-2016 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 PANTHER PTHR11562:SF40 12 154 3.9E-133 T 14-09-2016 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 27 327 1.5E-69 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 PANTHER PTHR11562 170 325 3.9E-133 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 PANTHER PTHR11562 12 154 3.9E-133 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 Pfam PF01545 Cation efflux family 32 254 2.0E-32 T 14-09-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK01_RS06265 b8d6278da00e37fe18725f7ba3412bbc 329 Gene3D G3DSA:1.20.1510.10 27 254 7.0E-45 T 14-09-2016 IPR027469 Cation efflux protein transmembrane domain AMK01_RS04120 7b7ebb6de1e56181ed002e737d50d7ec 169 Gene3D G3DSA:3.90.79.10 16 153 2.7E-18 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS04120 7b7ebb6de1e56181ed002e737d50d7ec 169 SUPERFAMILY SSF55811 12 154 1.62E-20 T 14-09-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK01_RS04120 7b7ebb6de1e56181ed002e737d50d7ec 169 Pfam PF00293 NUDIX domain 32 142 4.0E-8 T 14-09-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK01_RS04120 7b7ebb6de1e56181ed002e737d50d7ec 169 PANTHER PTHR12629 24 169 4.5E-16 T 14-09-2016 AMK01_RS04120 7b7ebb6de1e56181ed002e737d50d7ec 169 PANTHER PTHR12629:SF0 24 169 4.5E-16 T 14-09-2016 AMK01_RS02840 57463713acf6a02f7733a22acb2e3c47 223 SUPERFAMILY SSF51306 97 220 4.19E-24 T 14-09-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK01_RS02840 57463713acf6a02f7733a22acb2e3c47 223 Gene3D G3DSA:2.10.109.10 97 220 6.3E-21 T 14-09-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK01_RS02840 57463713acf6a02f7733a22acb2e3c47 223 Gene3D G3DSA:1.10.260.40 5 72 1.7E-9 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS02840 57463713acf6a02f7733a22acb2e3c47 223 Pfam PF00717 Peptidase S24-like 141 207 1.5E-13 T 14-09-2016 IPR019759 Peptidase S24/S26A/S26B AMK01_RS16930 c94cde8b6e6cf9cd0ccd165ca38d3351 137 Gene3D G3DSA:2.60.120.10 25 125 9.8E-22 T 14-09-2016 IPR014710 RmlC-like jelly roll fold AMK01_RS16930 c94cde8b6e6cf9cd0ccd165ca38d3351 137 SUPERFAMILY SSF51182 21 130 2.77E-24 T 14-09-2016 IPR011051 RmlC-like cupin domain AMK01_RS16930 c94cde8b6e6cf9cd0ccd165ca38d3351 137 Pfam PF07883 Cupin domain 44 113 1.3E-16 T 14-09-2016 IPR013096 Cupin 2, conserved barrel AMK01_RS16930 c94cde8b6e6cf9cd0ccd165ca38d3351 137 PIRSF PIRSF037087 1 136 6.8E-70 T 14-09-2016 IPR017102 Uncharacterised conserved protein UCP037087 AMK01_RS11905 26c69fedd6a0e473a973a99bd146c20d 314 SUPERFAMILY SSF53613 2 301 4.99E-53 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS11905 26c69fedd6a0e473a973a99bd146c20d 314 PANTHER PTHR10584 2 288 9.0E-39 T 14-09-2016 AMK01_RS11905 26c69fedd6a0e473a973a99bd146c20d 314 Gene3D G3DSA:3.40.1190.20 2 305 1.5E-65 T 14-09-2016 IPR029056 Ribokinase-like AMK01_RS11905 26c69fedd6a0e473a973a99bd146c20d 314 Pfam PF00294 pfkB family carbohydrate kinase 2 292 1.0E-41 T 14-09-2016 IPR011611 Carbohydrate kinase PfkB AMK01_RS11385 7310bec906e1c4df92d73d3e75307a9f 118 Pfam PF04191 Phospholipid methyltransferase 14 98 3.1E-6 T 14-09-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 AMK01_RS00520 adabbe7d3f35bbfbc3a5dfd49837cc61 281 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 139 256 1.4E-37 T 14-09-2016 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain AMK01_RS19470 82162087e4eb305cba0756dc3f6a01ea 307 PANTHER PTHR30213 1 280 6.3E-41 T 14-09-2016 AMK01_RS19470 82162087e4eb305cba0756dc3f6a01ea 307 PIRSF PIRSF035875 1 283 1.7E-67 T 14-09-2016 IPR017039 Virulence factor BrkB AMK01_RS19470 82162087e4eb305cba0756dc3f6a01ea 307 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 274 1.2E-26 T 14-09-2016 IPR017039 Virulence factor BrkB AMK01_RS19470 82162087e4eb305cba0756dc3f6a01ea 307 Pfam PF03631 Virulence factor BrkB 21 273 8.4E-48 T 14-09-2016 IPR017039 Virulence factor BrkB AMK01_RS00975 d65a096d85bfd16fe4c41aebd8a5d954 291 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 277 3.2E-147 T 14-09-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 AMK01_RS00975 d65a096d85bfd16fe4c41aebd8a5d954 291 PIRSF PIRSF011468 1 288 1.1E-164 T 14-09-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 AMK01_RS16690 bd1c548e684c3fc4046a19e7fab6515e 469 Pfam PF04932 O-Antigen ligase 242 385 7.7E-9 T 14-09-2016 IPR007016 O-antigen ligase-related AMK01_RS20730 5f41b2da2d7213786961831585506a6c 242 Pfam PF13580 SIS domain 8 142 1.2E-40 T 14-09-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK01_RS20730 5f41b2da2d7213786961831585506a6c 242 PANTHER PTHR30390:SF6 1 164 9.6E-15 T 14-09-2016 AMK01_RS20730 5f41b2da2d7213786961831585506a6c 242 Gene3D G3DSA:3.40.50.10490 1 237 7.2E-76 T 14-09-2016 AMK01_RS20730 5f41b2da2d7213786961831585506a6c 242 SUPERFAMILY SSF53697 2 207 7.34E-29 T 14-09-2016 AMK01_RS20730 5f41b2da2d7213786961831585506a6c 242 PANTHER PTHR30390 1 164 9.6E-15 T 14-09-2016 AMK01_RS00850 cabcf820a9f8975640c820b737f0d948 157 SUPERFAMILY SSF55729 9 153 1.86E-22 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS00850 cabcf820a9f8975640c820b737f0d948 157 Pfam PF00583 Acetyltransferase (GNAT) family 59 132 2.0E-11 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS00850 cabcf820a9f8975640c820b737f0d948 157 Gene3D G3DSA:3.40.630.30 11 155 5.6E-26 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS20455 f8595f9b70ac2571e2ef866226a7eece 214 SUPERFAMILY SSF52317 3 213 4.12E-39 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS20455 f8595f9b70ac2571e2ef866226a7eece 214 Gene3D G3DSA:3.40.50.880 2 214 5.3E-41 T 14-09-2016 IPR029062 Class I glutamine amidotransferase-like AMK01_RS20455 f8595f9b70ac2571e2ef866226a7eece 214 Pfam PF06283 Trehalose utilisation 3 211 4.8E-38 T 14-09-2016 IPR029010 ThuA-like domain AMK01_RS20375 329f4957f58acd2bcee76ee8486ea0e2 173 PANTHER PTHR38589 14 172 6.9E-29 T 14-09-2016 AMK01_RS20375 329f4957f58acd2bcee76ee8486ea0e2 173 PANTHER PTHR38589:SF1 14 172 6.9E-29 T 14-09-2016 AMK01_RS20375 329f4957f58acd2bcee76ee8486ea0e2 173 SUPERFAMILY SSF141523 131 172 3.66E-5 T 14-09-2016 AMK01_RS09125 a43a332512abd2fef2a2f671d4120c27 68 Gene3D G3DSA:1.10.443.10 2 51 7.1E-11 T 14-09-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS09125 a43a332512abd2fef2a2f671d4120c27 68 Pfam PF00589 Phage integrase family 2 48 9.9E-7 T 14-09-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK01_RS09125 a43a332512abd2fef2a2f671d4120c27 68 SUPERFAMILY SSF56349 1 50 7.65E-11 T 14-09-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK01_RS05075 2591afbb072fd877810c130b9d014d59 258 SUPERFAMILY SSF52833 81 255 4.27E-41 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05075 2591afbb072fd877810c130b9d014d59 258 PANTHER PTHR13887 87 258 4.4E-30 T 14-09-2016 AMK01_RS05075 2591afbb072fd877810c130b9d014d59 258 Gene3D G3DSA:3.40.30.10 186 255 4.0E-6 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05075 2591afbb072fd877810c130b9d014d59 258 Pfam PF13462 Thioredoxin 84 255 5.9E-45 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS05075 2591afbb072fd877810c130b9d014d59 258 Gene3D G3DSA:3.40.30.10 71 180 5.3E-35 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS19450 30e70adb3c3830ba70f09ea99f622725 170 Gene3D G3DSA:1.20.1550.10 15 166 1.5E-15 T 14-09-2016 IPR023380 Disulphide bond formation protein DsbB-like domain AMK01_RS19450 30e70adb3c3830ba70f09ea99f622725 170 Pfam PF02600 Disulfide bond formation protein DsbB 15 164 2.2E-29 T 14-09-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AMK01_RS19450 30e70adb3c3830ba70f09ea99f622725 170 SUPERFAMILY SSF158442 16 164 8.24E-32 T 14-09-2016 AMK01_RS19450 30e70adb3c3830ba70f09ea99f622725 170 PIRSF PIRSF033913 8 170 1.1E-64 T 14-09-2016 IPR024199 Uncharacterised conserved protein, DsbB-like AMK01_RS14680 73f8a442749aaf3eaba270041cb456ee 175 Gene3D G3DSA:1.10.530.10 56 159 7.4E-34 T 14-09-2016 AMK01_RS14680 73f8a442749aaf3eaba270041cb456ee 175 SUPERFAMILY SSF53955 43 173 4.79E-36 T 14-09-2016 IPR023346 Lysozyme-like domain AMK01_RS14680 73f8a442749aaf3eaba270041cb456ee 175 Pfam PF01464 Transglycosylase SLT domain 60 158 1.4E-23 T 14-09-2016 IPR008258 Transglycosylase SLT domain 1 AMK01_RS14680 73f8a442749aaf3eaba270041cb456ee 175 PANTHER PTHR21666 39 158 6.8E-25 T 14-09-2016 AMK01_RS01090 760a6898bcd355ad5adb0d9e7ba46953 330 PANTHER PTHR34296:SF2 14 319 5.1E-106 T 14-09-2016 AMK01_RS01090 760a6898bcd355ad5adb0d9e7ba46953 330 PANTHER PTHR34296 14 319 5.1E-106 T 14-09-2016 AMK01_RS01090 760a6898bcd355ad5adb0d9e7ba46953 330 Gene3D G3DSA:3.40.50.2300 127 288 9.5E-59 T 14-09-2016 AMK01_RS01090 760a6898bcd355ad5adb0d9e7ba46953 330 Pfam PF02608 Basic membrane protein 35 313 3.8E-59 T 14-09-2016 IPR003760 Basic membrane lipoprotein GO:0005886 AMK01_RS01090 760a6898bcd355ad5adb0d9e7ba46953 330 SUPERFAMILY SSF53822 35 262 5.05E-16 T 14-09-2016 IPR028082 Periplasmic binding protein-like I AMK01_RS15360 79442f3d924eb725d3e8d3c3f8722208 205 Pfam PF06823 Protein of unknown function (DUF1236) 146 205 1.2E-19 T 14-09-2016 IPR009642 Protein of unknown function DUF1236 AMK01_RS15360 79442f3d924eb725d3e8d3c3f8722208 205 Pfam PF08239 Bacterial SH3 domain 32 83 5.4E-10 T 14-09-2016 IPR003646 SH3-like domain, bacterial-type AMK01_RS15380 ee39c140b8c0c6f92479ad59a96bc826 166 Pfam PF10722 Putative bacterial sensory transduction regulator 14 143 7.4E-28 T 14-09-2016 IPR019660 Putative sensory transduction regulator YbjN AMK01_RS09950 a651764de0d2a2b1bdd3c5c628232c24 290 PANTHER PTHR11795 5 284 1.8E-73 T 14-09-2016 AMK01_RS09950 a651764de0d2a2b1bdd3c5c628232c24 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 276 1.4E-35 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS04530 c09d55e2d800e6657dca50de0ae6bac5 162 Pfam PF04463 Protein of unknown function (DUF523) 5 150 1.0E-40 T 14-09-2016 IPR007553 Domain of unknown function DUF523 AMK01_RS04530 c09d55e2d800e6657dca50de0ae6bac5 162 PANTHER PTHR30087 4 161 1.6E-54 T 14-09-2016 AMK01_RS04530 c09d55e2d800e6657dca50de0ae6bac5 162 PANTHER PTHR30087:SF1 4 161 1.6E-54 T 14-09-2016 AMK01_RS01525 b8f358006c42a08affc2bd810402c1a9 206 Gene3D G3DSA:3.30.1380.10 22 84 4.0E-7 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS01525 b8f358006c42a08affc2bd810402c1a9 206 SUPERFAMILY SSF55166 22 174 8.63E-17 T 14-09-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK01_RS02015 961625ee432d8e1abd122b4f0217db5f 85 Pfam PF06620 Protein of unknown function (DUF1150) 10 85 1.3E-31 T 14-09-2016 IPR009531 Protein of unknown function DUF1150 AMK01_RS01705 b3498744e3af88ce5351e843b83cedf6 424 Pfam PF09375 Imelysin 40 395 1.1E-98 T 14-09-2016 AMK01_RS02205 07c53efcb7c7f2bfb9328cccf1f895fd 221 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 75 208 3.0E-7 T 14-09-2016 IPR010664 Lipopolysaccharide assembly, LptC-related AMK01_RS03435 8afe08c0a18ac491a7b2c26549144bd1 248 Gene3D G3DSA:1.10.10.10 187 247 5.3E-19 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS03435 8afe08c0a18ac491a7b2c26549144bd1 248 SUPERFAMILY SSF46894 168 247 2.14E-16 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS03435 8afe08c0a18ac491a7b2c26549144bd1 248 ProSitePatterns PS00622 LuxR-type HTH domain signature. 201 228 - T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03435 8afe08c0a18ac491a7b2c26549144bd1 248 Pfam PF00196 Bacterial regulatory proteins, luxR family 186 240 7.7E-12 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03435 8afe08c0a18ac491a7b2c26549144bd1 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 217 1.3E-7 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03435 8afe08c0a18ac491a7b2c26549144bd1 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 229 1.3E-7 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03435 8afe08c0a18ac491a7b2c26549144bd1 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 201 1.3E-7 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS03435 8afe08c0a18ac491a7b2c26549144bd1 248 SMART SM00421 184 241 4.5E-16 T 14-09-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMK01_RS25895 c05a1baaa6b2d7f3dfb7e973bbb54247 159 PANTHER PTHR30244:SF16 1 159 3.6E-71 T 14-09-2016 AMK01_RS25895 c05a1baaa6b2d7f3dfb7e973bbb54247 159 SUPERFAMILY SSF53383 1 150 1.14E-59 T 14-09-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK01_RS25895 c05a1baaa6b2d7f3dfb7e973bbb54247 159 PANTHER PTHR30244 1 159 3.6E-71 T 14-09-2016 AMK01_RS25895 c05a1baaa6b2d7f3dfb7e973bbb54247 159 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 1 159 2.0E-69 T 14-09-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMK01_RS25895 c05a1baaa6b2d7f3dfb7e973bbb54247 159 Gene3D G3DSA:3.40.640.10 1 148 4.0E-58 T 14-09-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK01_RS01195 b6aca4e18503adf05aa653fabfe8be88 491 PANTHER PTHR30258 36 460 1.2E-139 T 14-09-2016 AMK01_RS01195 b6aca4e18503adf05aa653fabfe8be88 491 Pfam PF00437 Type II/IV secretion system protein 135 410 2.6E-79 T 14-09-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AMK01_RS01195 b6aca4e18503adf05aa653fabfe8be88 491 Gene3D G3DSA:3.30.450.90 131 228 1.1E-34 T 14-09-2016 AMK01_RS01195 b6aca4e18503adf05aa653fabfe8be88 491 PANTHER PTHR30258:SF3 36 460 1.2E-139 T 14-09-2016 AMK01_RS01195 b6aca4e18503adf05aa653fabfe8be88 491 Gene3D G3DSA:3.40.50.300 232 454 5.1E-65 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS01195 b6aca4e18503adf05aa653fabfe8be88 491 SUPERFAMILY SSF52540 115 437 5.6E-63 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS03365 6775a64f814934fd7fb912729da4c4ca 83 SUPERFAMILY SSF47413 14 63 5.63E-8 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS03365 6775a64f814934fd7fb912729da4c4ca 83 Gene3D G3DSA:1.10.260.40 16 53 9.9E-8 T 14-09-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK01_RS03365 6775a64f814934fd7fb912729da4c4ca 83 Pfam PF01381 Helix-turn-helix 16 44 1.8E-5 T 14-09-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK01_RS13100 c633db0e959210d01dd556af71d11e22 266 PANTHER PTHR10108 8 230 2.0E-35 T 14-09-2016 AMK01_RS13100 c633db0e959210d01dd556af71d11e22 266 Pfam PF08241 Methyltransferase domain 41 135 1.2E-23 T 14-09-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK01_RS13100 c633db0e959210d01dd556af71d11e22 266 Gene3D G3DSA:3.40.50.150 10 247 8.9E-42 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS13100 c633db0e959210d01dd556af71d11e22 266 SUPERFAMILY SSF53335 11 211 4.03E-45 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS08765 e8dcf262e4a32e63bc96c2a2d996699f 132 Pfam PF06823 Protein of unknown function (DUF1236) 70 132 1.1E-20 T 14-09-2016 IPR009642 Protein of unknown function DUF1236 AMK01_RS19300 a550790b6e0ef328cd247fb677f45bfc 242 Pfam PF13763 Domain of unknown function (DUF4167) 24 98 1.6E-30 T 14-09-2016 IPR025430 Domain of unknown function DUF4167 AMK01_RS28795 952b556aa435055b0f53409dac568c1c 62 SUPERFAMILY SSF53686 2 61 7.2E-17 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS28795 952b556aa435055b0f53409dac568c1c 62 PANTHER PTHR10314 1 62 3.3E-30 T 14-09-2016 AMK01_RS28795 952b556aa435055b0f53409dac568c1c 62 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 2 59 3.8E-10 T 14-09-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK01_RS28795 952b556aa435055b0f53409dac568c1c 62 PANTHER PTHR10314:SF110 1 62 3.3E-30 T 14-09-2016 AMK01_RS28795 952b556aa435055b0f53409dac568c1c 62 Gene3D G3DSA:3.40.50.1100 1 62 1.2E-23 T 14-09-2016 AMK01_RS11860 387723e603ad7710a326342c2e6e56d4 679 PANTHER PTHR30509 23 525 8.4E-14 T 14-09-2016 AMK01_RS11860 387723e603ad7710a326342c2e6e56d4 679 Pfam PF13515 Fusaric acid resistance protein-like 371 495 3.7E-17 T 14-09-2016 AMK01_RS06110 c10ea911d1559fa75800f8432549fe11 256 Gene3D G3DSA:3.40.50.150 3 152 3.1E-27 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS06110 c10ea911d1559fa75800f8432549fe11 256 PANTHER PTHR10108:SF890 3 234 1.0E-60 T 14-09-2016 AMK01_RS06110 c10ea911d1559fa75800f8432549fe11 256 Pfam PF13649 Methyltransferase domain 35 123 1.5E-10 T 14-09-2016 AMK01_RS06110 c10ea911d1559fa75800f8432549fe11 256 Gene3D G3DSA:1.10.150.290 181 236 4.4E-27 T 14-09-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMK01_RS06110 c10ea911d1559fa75800f8432549fe11 256 PANTHER PTHR10108 3 234 1.0E-60 T 14-09-2016 AMK01_RS06110 c10ea911d1559fa75800f8432549fe11 256 SUPERFAMILY SSF53335 17 255 1.13E-26 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS06110 c10ea911d1559fa75800f8432549fe11 256 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 1 256 42.736 T 14-09-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AMK01_RS00075 845db115a08637172084ea0dc6797d58 94 PIRSF PIRSF028291 1 94 2.3E-34 T 14-09-2016 IPR014543 Uncharacterised conserved protein UCP028291 AMK01_RS00075 845db115a08637172084ea0dc6797d58 94 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 93 5.2E-34 T 14-09-2016 IPR014543 Uncharacterised conserved protein UCP028291 AMK01_RS15505 f8c89dd53e2b4c19070ad892f26c0a2d 76 SUPERFAMILY SSF47598 4 45 8.67E-5 T 14-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK01_RS06795 df746e32ffd9bccb0a025ee772d87ad2 145 SUPERFAMILY SSF54593 3 142 2.06E-36 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06795 df746e32ffd9bccb0a025ee772d87ad2 145 Gene3D G3DSA:3.10.180.10 1 144 1.4E-54 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS06795 df746e32ffd9bccb0a025ee772d87ad2 145 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 121 2.4E-11 T 14-09-2016 AMK01_RS19820 9c1454daa9223c518451269308c69ed7 81 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 8 66 3.4E-28 T 14-09-2016 IPR021074 Formate dehydrogenase, delta subunit AMK01_RS11310 0b3cb5a2592bb5cfa47118d203b56ba7 203 SUPERFAMILY SSF141371 118 200 1.41E-7 T 14-09-2016 AMK01_RS11310 0b3cb5a2592bb5cfa47118d203b56ba7 203 Pfam PF07238 PilZ domain 120 203 7.4E-7 T 14-09-2016 IPR009875 PilZ domain GO:0035438 AMK01_RS16180 b4d76403d115a26d7f5cf09f5dff8fcd 564 Gene3D G3DSA:3.40.1140.10 454 544 2.3E-13 T 14-09-2016 AMK01_RS16180 b4d76403d115a26d7f5cf09f5dff8fcd 564 Gene3D G3DSA:3.40.1140.10 3 91 2.3E-13 T 14-09-2016 AMK01_RS16180 b4d76403d115a26d7f5cf09f5dff8fcd 564 Pfam PF13476 AAA domain 21 280 4.9E-8 T 14-09-2016 AMK01_RS16180 b4d76403d115a26d7f5cf09f5dff8fcd 564 SUPERFAMILY SSF52540 9 175 3.07E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16180 b4d76403d115a26d7f5cf09f5dff8fcd 564 SUPERFAMILY SSF52540 442 558 3.07E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS16180 b4d76403d115a26d7f5cf09f5dff8fcd 564 SUPERFAMILY SSF52540 327 358 3.07E-12 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS17790 810447090447f24c5d5a90aa87a7972f 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 311 2.4E-36 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS17790 810447090447f24c5d5a90aa87a7972f 334 PANTHER PTHR30482:SF2 23 333 2.3E-57 T 14-09-2016 AMK01_RS17790 810447090447f24c5d5a90aa87a7972f 334 PANTHER PTHR30482 23 333 2.3E-57 T 14-09-2016 AMK01_RS03080 41f9800ae60a379f2c79e5533822ae9e 143 Pfam PF11164 Protein of unknown function (DUF2948) 4 142 7.4E-54 T 14-09-2016 IPR021335 Protein of unknown function DUF2948 AMK01_RS19520 8ce56d30b6320ebe4075ae7a53ed3637 64 Pfam PF13627 Prokaryotic lipoprotein-attachment site 12 34 4.7E-8 T 14-09-2016 IPR032831 Prokaryotic lipoprotein-attachment site AMK01_RS05130 2189818e070a5a322f483974eeb368c3 573 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 9 127 1.1E-7 T 14-09-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMK01_RS05130 2189818e070a5a322f483974eeb368c3 573 PANTHER PTHR12286 1 150 4.1E-12 T 14-09-2016 AMK01_RS05130 2189818e070a5a322f483974eeb368c3 573 Pfam PF13761 Domain of unknown function (DUF4166) 412 570 1.1E-33 T 14-09-2016 IPR025311 Domain of unknown function DUF4166 AMK01_RS05130 2189818e070a5a322f483974eeb368c3 573 Gene3D G3DSA:3.40.50.720 9 177 4.4E-10 T 14-09-2016 IPR016040 NAD(P)-binding domain AMK01_RS16440 53a7a5e17dfcd0ae7e83a2932fbf719f 89 Pfam PF04972 BON domain 24 82 1.6E-7 T 14-09-2016 IPR007055 BON domain AMK01_RS12200 3a74f204aa778895ecb011d688af1a3e 396 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 20 380 1.7E-108 T 14-09-2016 IPR010640 Low temperature requirement A AMK01_RS12200 3a74f204aa778895ecb011d688af1a3e 396 PANTHER PTHR36840:SF1 19 386 3.2E-57 T 14-09-2016 AMK01_RS12200 3a74f204aa778895ecb011d688af1a3e 396 PANTHER PTHR36840 19 386 3.2E-57 T 14-09-2016 AMK01_RS21135 4319b00d387a0d3e490a7c56c3476919 233 Pfam PF06242 Protein of unknown function (DUF1013) 35 172 2.0E-68 T 14-09-2016 IPR010421 Protein of unknown function DUF1013 AMK01_RS15255 935ca9d813e0be38b966332773891bf4 169 SUPERFAMILY SSF81301 9 167 2.94E-44 T 14-09-2016 AMK01_RS15255 935ca9d813e0be38b966332773891bf4 169 Gene3D G3DSA:3.30.460.10 3 167 3.9E-48 T 14-09-2016 AMK01_RS15255 935ca9d813e0be38b966332773891bf4 169 Pfam PF04229 GrpB protein 6 164 8.9E-43 T 14-09-2016 IPR007344 GrpB/Dephospho-CoA kinase AMK01_RS15255 935ca9d813e0be38b966332773891bf4 169 PANTHER PTHR34822 3 167 1.0E-40 T 14-09-2016 AMK01_RS00280 ab13a38148fb83c6b56c01b4e3f74b22 164 Pfam PF06319 Protein of unknown function (DUF1052) 9 154 8.7E-78 T 14-09-2016 IPR009394 DNA repair protein MmcB-like AMK01_RS00280 ab13a38148fb83c6b56c01b4e3f74b22 164 PIRSF PIRSF031796 1 162 6.6E-93 T 14-09-2016 IPR009394 DNA repair protein MmcB-like AMK01_RS07340 2f8ce25641cb07eb87beb4916ac96f4e 239 PANTHER PTHR34979 1 239 9.3E-41 T 14-09-2016 AMK01_RS07340 2f8ce25641cb07eb87beb4916ac96f4e 239 Pfam PF03591 AzlC protein 25 164 2.6E-36 T 14-09-2016 IPR011606 Branched-chain amino acid transport, permease AMK01_RS17125 400407cf01b8e950e0f08cedc121702d 91 Pfam PF06627 Protein of unknown function (DUF1153) 8 90 1.7E-42 T 14-09-2016 IPR009534 Protein of unknown function DUF1153 AMK01_RS17125 400407cf01b8e950e0f08cedc121702d 91 Gene3D G3DSA:1.10.10.10 10 91 1.7E-39 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS17125 400407cf01b8e950e0f08cedc121702d 91 SUPERFAMILY SSF48295 12 90 1.05E-20 T 14-09-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMK01_RS14270 cd775736cca5336994e8b72dbce70fd4 123 Pfam PF02211 Nitrile hydratase beta subunit 22 110 5.9E-6 T 14-09-2016 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AMK01_RS14270 cd775736cca5336994e8b72dbce70fd4 123 SUPERFAMILY SSF50090 13 121 4.32E-23 T 14-09-2016 IPR008990 Electron transport accessory protein-like domain AMK01_RS14270 cd775736cca5336994e8b72dbce70fd4 123 TIGRFAM TIGR03889 nitrile_acc: nitrile hydratase accessory protein 26 95 4.3E-28 T 14-09-2016 IPR023808 Nitrile hydratase accessory protein, putative AMK01_RS14270 cd775736cca5336994e8b72dbce70fd4 123 Gene3D G3DSA:1.10.472.20 19 107 5.4E-15 T 14-09-2016 AMK01_RS12615 08b36e670cc6762dcbcddb873ba7dd79 205 SUPERFAMILY SSF53335 4 190 5.5E-24 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS12615 08b36e670cc6762dcbcddb873ba7dd79 205 Gene3D G3DSA:3.40.50.150 6 190 5.4E-20 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS12615 08b36e670cc6762dcbcddb873ba7dd79 205 Pfam PF13649 Methyltransferase domain 47 132 1.5E-8 T 14-09-2016 AMK01_RS11225 8646978b1e84cd1be6f9e1226ee18d73 401 Pfam PF01594 Domain of unknown function DUF20 36 366 3.2E-37 T 14-09-2016 IPR002549 Transmembrane protein TqsA-like AMK01_RS11225 8646978b1e84cd1be6f9e1226ee18d73 401 PANTHER PTHR21716:SF12 6 367 6.5E-138 T 14-09-2016 AMK01_RS11225 8646978b1e84cd1be6f9e1226ee18d73 401 PANTHER PTHR21716 6 367 6.5E-138 T 14-09-2016 IPR002549 Transmembrane protein TqsA-like AMK01_RS14820 eb2c4e6037f428a84313e7a0e72e4894 520 PANTHER PTHR11785:SF286 19 520 3.3E-58 T 14-09-2016 AMK01_RS14820 eb2c4e6037f428a84313e7a0e72e4894 520 PANTHER PTHR11785 19 520 3.3E-58 T 14-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK01_RS14820 eb2c4e6037f428a84313e7a0e72e4894 520 Pfam PF13520 Amino acid permease 31 474 1.6E-45 T 14-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK01_RS14820 eb2c4e6037f428a84313e7a0e72e4894 520 PIRSF PIRSF006060 9 511 1.4E-45 T 14-09-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK01_RS13225 6dd781491de902db2b285d68dc34a11c 290 Pfam PF11769 Protein of unknown function (DUF3313) 30 219 3.9E-45 T 14-09-2016 IPR021747 Protein of unknown function DUF3313 AMK01_RS08830 3798931125fd0df5956bc19b178344e0 443 Gene3D G3DSA:3.90.226.10 59 134 3.0E-7 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS08830 3798931125fd0df5956bc19b178344e0 443 SUPERFAMILY SSF52096 39 136 3.08E-10 T 14-09-2016 IPR029045 ClpP/crotonase-like domain AMK01_RS00665 3e5e53b8fdf613c6d0e2c923e928df49 211 PANTHER PTHR30506 1 210 5.3E-58 T 14-09-2016 AMK01_RS00665 3e5e53b8fdf613c6d0e2c923e928df49 211 Pfam PF03458 UPF0126 domain 6 80 9.7E-21 T 14-09-2016 IPR005115 Uncharacterised domain UPF0126 AMK01_RS00665 3e5e53b8fdf613c6d0e2c923e928df49 211 Pfam PF03458 UPF0126 domain 92 164 3.2E-18 T 14-09-2016 IPR005115 Uncharacterised domain UPF0126 AMK01_RS10760 404866a719319e7af8585ae799a915a1 185 Pfam PF04229 GrpB protein 3 167 2.3E-37 T 14-09-2016 IPR007344 GrpB/Dephospho-CoA kinase AMK01_RS10760 404866a719319e7af8585ae799a915a1 185 PANTHER PTHR34822 1 180 9.7E-37 T 14-09-2016 AMK01_RS10760 404866a719319e7af8585ae799a915a1 185 Gene3D G3DSA:3.30.460.10 2 175 8.3E-44 T 14-09-2016 AMK01_RS10760 404866a719319e7af8585ae799a915a1 185 SUPERFAMILY SSF81301 5 174 3.92E-35 T 14-09-2016 AMK01_RS06950 78d5206e158553c1c90350a4b743c980 269 Pfam PF00535 Glycosyl transferase family 2 5 115 4.5E-6 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS06950 78d5206e158553c1c90350a4b743c980 269 Gene3D G3DSA:3.90.550.10 1 193 7.8E-9 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS06950 78d5206e158553c1c90350a4b743c980 269 SUPERFAMILY SSF53448 3 225 7.66E-18 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS16550 68558e07e373b83d4b94085ae6ffe6fc 614 SUPERFAMILY SSF48452 436 583 1.38E-17 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS16550 68558e07e373b83d4b94085ae6ffe6fc 614 Gene3D G3DSA:1.25.40.10 389 583 1.0E-17 T 14-09-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK01_RS16550 68558e07e373b83d4b94085ae6ffe6fc 614 SUPERFAMILY SSF46894 3 72 7.82E-5 T 14-09-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK01_RS13450 ca6f1896e3706c5767088022afafd109 307 Pfam PF03690 Uncharacterised protein family (UPF0160) 6 298 4.1E-72 T 14-09-2016 IPR003226 Metal-dependent protein hydrolase AMK01_RS13450 ca6f1896e3706c5767088022afafd109 307 PANTHER PTHR11215 1 301 5.6E-48 T 14-09-2016 IPR003226 Metal-dependent protein hydrolase AMK01_RS07795 a2b1ce49f672fb264268173ebebe1463 810 Pfam PF03170 Bacterial cellulose synthase subunit 93 689 1.8E-118 T 14-09-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 AMK01_RS01820 b276bd9462e1b342580af91c996e5c0e 300 PANTHER PTHR22911 4 295 1.7E-64 T 14-09-2016 AMK01_RS01820 b276bd9462e1b342580af91c996e5c0e 300 PANTHER PTHR22911:SF44 4 295 1.7E-64 T 14-09-2016 AMK01_RS01820 b276bd9462e1b342580af91c996e5c0e 300 SUPERFAMILY SSF103481 189 288 1.7E-13 T 14-09-2016 AMK01_RS01820 b276bd9462e1b342580af91c996e5c0e 300 Pfam PF00892 EamA-like transporter family 155 285 2.4E-17 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS01820 b276bd9462e1b342580af91c996e5c0e 300 Pfam PF00892 EamA-like transporter family 14 139 4.7E-10 T 14-09-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK01_RS01820 b276bd9462e1b342580af91c996e5c0e 300 SUPERFAMILY SSF103481 39 141 1.22E-13 T 14-09-2016 AMK01_RS20645 fc5f689a528458f5644e88e433efb938 51 Pfam PF11752 Protein of unknown function (DUF3309) 3 51 1.9E-24 T 14-09-2016 IPR021738 Protein of unknown function DUF3309 AMK01_RS04420 4c13c0bf2b83b809e1a0a78e151e68a0 163 Pfam PF00430 ATP synthase B/B' CF(0) 12 138 2.7E-22 T 14-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK01_RS04420 4c13c0bf2b83b809e1a0a78e151e68a0 163 Hamap MF_01398 ATP synthase subunit b [atpF]. 3 162 11.137 T 14-09-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK01_RS11320 bcb180d0d8ba762d1592813ae539378f 201 PANTHER PTHR39327 23 193 2.1E-42 T 14-09-2016 AMK01_RS11320 bcb180d0d8ba762d1592813ae539378f 201 PANTHER PTHR39327:SF2 23 193 2.1E-42 T 14-09-2016 AMK01_RS11320 bcb180d0d8ba762d1592813ae539378f 201 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 35 193 4.4E-69 T 14-09-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMK01_RS03535 fc175785c9005b82a3f874a8b1dfb651 177 Gene3D G3DSA:3.40.50.1820 3 176 4.4E-40 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS03535 fc175785c9005b82a3f874a8b1dfb651 177 SUPERFAMILY SSF53474 4 174 1.8E-31 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS03535 fc175785c9005b82a3f874a8b1dfb651 177 Pfam PF06821 Serine hydrolase 6 170 2.4E-53 T 14-09-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMK01_RS21010 39f367faf8008cbbe34c1fa9dd02dbff 139 PANTHER PTHR34109 1 132 1.1E-26 T 14-09-2016 AMK01_RS21010 39f367faf8008cbbe34c1fa9dd02dbff 139 PANTHER PTHR34109:SF1 1 132 1.1E-26 T 14-09-2016 AMK01_RS21010 39f367faf8008cbbe34c1fa9dd02dbff 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 132 1.9E-14 T 14-09-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK01_RS21010 39f367faf8008cbbe34c1fa9dd02dbff 139 Gene3D G3DSA:3.10.180.10 25 137 1.5E-30 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS21010 39f367faf8008cbbe34c1fa9dd02dbff 139 SUPERFAMILY SSF54593 18 137 2.28E-33 T 14-09-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK01_RS01815 de21adc282367d937d0782f941d07365 205 Pfam PF01810 LysE type translocator 15 202 3.3E-27 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS01815 de21adc282367d937d0782f941d07365 205 PANTHER PTHR30086 1 205 2.0E-34 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS02250 072df51f248690be0f123436512b14e0 407 PANTHER PTHR30563 25 375 7.1E-74 T 14-09-2016 AMK01_RS02250 072df51f248690be0f123436512b14e0 407 Pfam PF02646 RmuC family 97 374 1.3E-58 T 14-09-2016 IPR003798 DNA recombination RmuC AMK01_RS02600 97990b60f777addbcd21df37135fecb7 249 PANTHER PTHR30177:SF11 13 229 5.6E-67 T 14-09-2016 AMK01_RS02600 97990b60f777addbcd21df37135fecb7 249 SUPERFAMILY SSF161098 48 228 4.84E-27 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02600 97990b60f777addbcd21df37135fecb7 249 PANTHER PTHR30177 13 229 5.6E-67 T 14-09-2016 AMK01_RS02600 97990b60f777addbcd21df37135fecb7 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 241 4.0E-17 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS02600 97990b60f777addbcd21df37135fecb7 249 Gene3D G3DSA:1.10.3720.10 8 230 1.1E-18 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS27850 7ce8fbba781e6e7a7a502fd109782c12 73 Pfam PF00583 Acetyltransferase (GNAT) family 2 73 2.8E-8 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS27850 7ce8fbba781e6e7a7a502fd109782c12 73 Gene3D G3DSA:3.40.630.30 1 73 3.2E-20 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS27850 7ce8fbba781e6e7a7a502fd109782c12 73 SUPERFAMILY SSF55729 2 73 1.14E-12 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS09845 0336b2abbd3ec942389bf6ab70d151fd 150 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 140 5.2E-31 T 14-09-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain AMK01_RS09845 0336b2abbd3ec942389bf6ab70d151fd 150 PANTHER PTHR12901 1 147 1.4E-41 T 14-09-2016 AMK01_RS09845 0336b2abbd3ec942389bf6ab70d151fd 150 SUPERFAMILY SSF55961 1 148 2.95E-36 T 14-09-2016 AMK01_RS09845 0336b2abbd3ec942389bf6ab70d151fd 150 Gene3D G3DSA:3.30.530.20 1 147 1.8E-51 T 14-09-2016 IPR023393 START-like domain AMK01_RS07250 2bc581c8be110f5326f2322c87cbef14 335 Pfam PF00326 Prolyl oligopeptidase family 258 333 1.4E-5 T 14-09-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMK01_RS07250 2bc581c8be110f5326f2322c87cbef14 335 SUPERFAMILY SSF53474 7 334 9.88E-44 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS07250 2bc581c8be110f5326f2322c87cbef14 335 Pfam PF00561 alpha/beta hydrolase fold 50 176 3.0E-18 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS07250 2bc581c8be110f5326f2322c87cbef14 335 Gene3D G3DSA:3.40.50.1820 19 328 6.5E-38 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS07250 2bc581c8be110f5326f2322c87cbef14 335 PANTHER PTHR10992 116 210 7.9E-22 T 14-09-2016 AMK01_RS07250 2bc581c8be110f5326f2322c87cbef14 335 PANTHER PTHR10992 50 100 7.9E-22 T 14-09-2016 AMK01_RS07250 2bc581c8be110f5326f2322c87cbef14 335 PANTHER PTHR10992 230 330 7.9E-22 T 14-09-2016 AMK01_RS16350 a8903b9ffbb69b3c197a17f7c1ae66b5 733 Pfam PF12728 Helix-turn-helix domain 366 415 1.7E-6 T 14-09-2016 AMK01_RS16350 a8903b9ffbb69b3c197a17f7c1ae66b5 733 Pfam PF06527 TniQ 65 130 6.4E-10 T 14-09-2016 IPR009492 TniQ AMK01_RS12635 c4d100cf863fbee621ac6e3d25fefb29 132 Gene3D G3DSA:3.30.530.20 3 131 4.2E-55 T 14-09-2016 IPR023393 START-like domain AMK01_RS12635 c4d100cf863fbee621ac6e3d25fefb29 132 SUPERFAMILY SSF55961 2 131 2.71E-33 T 14-09-2016 AMK01_RS04825 cce27fd33420d44aee9e6568aa32fcdc 163 SUPERFAMILY SSF55729 1 140 4.36E-25 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS04825 cce27fd33420d44aee9e6568aa32fcdc 163 Pfam PF13508 Acetyltransferase (GNAT) domain 52 138 7.9E-11 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS04825 cce27fd33420d44aee9e6568aa32fcdc 163 PANTHER PTHR13947 33 160 2.9E-27 T 14-09-2016 AMK01_RS04825 cce27fd33420d44aee9e6568aa32fcdc 163 Gene3D G3DSA:3.40.630.30 1 160 7.3E-40 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS06275 56fc1b70be8c1fc871ff85a91ac56050 79 Pfam PF06568 Domain of unknown function (DUF1127) 27 56 1.0E-7 T 14-09-2016 IPR009506 Protein of unknown function DUF1127 AMK01_RS11435 3d244218284f28fe16b597d71613d116 130 PANTHER PTHR33452 1 127 1.6E-42 T 14-09-2016 AMK01_RS11435 3d244218284f28fe16b597d71613d116 130 PANTHER PTHR33452:SF4 1 127 1.6E-42 T 14-09-2016 AMK01_RS11435 3d244218284f28fe16b597d71613d116 130 Pfam PF07681 DoxX 15 89 3.6E-14 T 14-09-2016 IPR032808 DoxX family AMK01_RS24775 be4e9397afb049ede3f24501038c44b0 99 Pfam PF12705 PD-(D/E)XK nuclease superfamily 7 97 2.5E-5 T 14-09-2016 AMK01_RS06515 8444dfc14729de8b2a79fa71a5ebc52b 122 Pfam PF06170 Protein of unknown function (DUF983) 28 112 1.6E-31 T 14-09-2016 IPR009325 Protein of unknown function DUF983 AMK01_RS09635 24aada014a1c7cf51aef2c7b977e877b 123 ProDom PD007745 LIPOPROTEIN MEMBRANE PRECURSOR PALMITATE SIGNAL HOMOLOG MG307 MG309 MG338 P02_ORF1300 7 93 0.008 T 14-09-2016 AMK01_RS09635 24aada014a1c7cf51aef2c7b977e877b 123 Pfam PF09361 Phasin protein 8 102 1.9E-23 T 14-09-2016 IPR018968 Phasin AMK01_RS04865 095b1cbbe2e8e7f4e9957453ba2c02f0 292 Gene3D G3DSA:1.20.120.80 86 283 1.2E-74 T 14-09-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 AMK01_RS04865 095b1cbbe2e8e7f4e9957453ba2c02f0 292 PANTHER PTHR11403 2 286 1.6E-126 T 14-09-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 AMK01_RS04865 095b1cbbe2e8e7f4e9957453ba2c02f0 292 Pfam PF00510 Cytochrome c oxidase subunit III 9 283 3.1E-90 T 14-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMK01_RS04865 095b1cbbe2e8e7f4e9957453ba2c02f0 292 PANTHER PTHR11403:SF7 2 286 1.6E-126 T 14-09-2016 AMK01_RS04865 095b1cbbe2e8e7f4e9957453ba2c02f0 292 SUPERFAMILY SSF81452 5 283 5.89E-99 T 14-09-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 AMK01_RS04865 095b1cbbe2e8e7f4e9957453ba2c02f0 292 Gene3D G3DSA:1.10.287.70 5 84 5.8E-30 T 14-09-2016 AMK01_RS18215 a0625e2ad74486f78fb557bc63f78888 57 Pfam PF04325 Protein of unknown function (DUF465) 8 53 3.8E-13 T 14-09-2016 IPR007420 Protein of unknown function DUF465 AMK01_RS05490 9e23611b0ba74ce7a58ee9cddb7bbf8e 379 SUPERFAMILY SSF50939 118 347 2.94E-44 T 14-09-2016 IPR011040 Sialidases AMK01_RS05490 9e23611b0ba74ce7a58ee9cddb7bbf8e 379 SUPERFAMILY SSF50939 9 90 2.94E-44 T 14-09-2016 IPR011040 Sialidases AMK01_RS05490 9e23611b0ba74ce7a58ee9cddb7bbf8e 379 Gene3D G3DSA:2.120.10.10 60 351 6.9E-20 T 14-09-2016 IPR011040 Sialidases AMK01_RS18460 9101489d3a39ca6dee8c8b1d6d5e4b40 237 SUPERFAMILY SSF50199 135 227 4.97E-6 T 14-09-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK01_RS03995 df910485bf4c1169fd946d362bef9530 304 SUPERFAMILY SSF53335 90 260 4.55E-5 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS03995 df910485bf4c1169fd946d362bef9530 304 TIGRFAM TIGR04325 MTase_LIC12133: putative methyltransferase, LIC12133 family 39 300 2.2E-80 T 14-09-2016 IPR027612 Putative methyltransferase, LIC12133 family AMK01_RS09290 df56bae74c31f60aa2adedf83190da8c 48 Pfam PF06568 Domain of unknown function (DUF1127) 5 39 1.1E-15 T 14-09-2016 IPR009506 Protein of unknown function DUF1127 AMK01_RS04510 e5757cd466b38f4601e6ef687c59d586 643 Pfam PF09972 Predicted membrane protein (DUF2207) 458 566 3.3E-21 T 14-09-2016 IPR018702 Protein of unknown function DUF2207, membrane AMK01_RS04510 e5757cd466b38f4601e6ef687c59d586 643 Pfam PF09972 Predicted membrane protein (DUF2207) 27 449 1.8E-70 T 14-09-2016 IPR018702 Protein of unknown function DUF2207, membrane AMK01_RS10710 128701c0c48c79521bcf7b538b5accf4 334 PANTHER PTHR32196:SF19 15 330 1.5E-141 T 14-09-2016 AMK01_RS10710 128701c0c48c79521bcf7b538b5accf4 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 312 1.6E-39 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS10710 128701c0c48c79521bcf7b538b5accf4 334 PANTHER PTHR32196 15 330 1.5E-141 T 14-09-2016 AMK01_RS26730 e0cfee60f60304fb454d493130767b45 136 Pfam PF01252 Signal peptidase (SPase) II 70 136 5.5E-8 T 14-09-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK01_RS00240 38e89816e3e1fb4720d5007e0dda6f65 161 Pfam PF10947 Protein of unknown function (DUF2628) 24 90 7.0E-9 T 14-09-2016 IPR024399 Protein of unknown function DUF2628 AMK01_RS07545 a18b9ab437aa462d2a326b4caeefd5d7 211 Gene3D G3DSA:2.40.160.20 40 211 5.4E-33 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS07545 a18b9ab437aa462d2a326b4caeefd5d7 211 PANTHER PTHR34001 1 211 3.9E-23 T 14-09-2016 AMK01_RS07545 a18b9ab437aa462d2a326b4caeefd5d7 211 SUPERFAMILY SSF56925 46 211 2.88E-27 T 14-09-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK01_RS07545 a18b9ab437aa462d2a326b4caeefd5d7 211 Pfam PF13505 Outer membrane protein beta-barrel domain 12 211 9.9E-27 T 14-09-2016 IPR027385 Outer membrane protein beta-barrel AMK01_RS06340 69a18e13c36b7f7e5982d1f2cf958462 139 Pfam PF00582 Universal stress protein family 1 134 8.1E-25 T 14-09-2016 IPR006016 UspA GO:0006950 AMK01_RS06340 69a18e13c36b7f7e5982d1f2cf958462 139 PRINTS PR01438 Universal stress protein signature 97 109 9.3E-7 T 14-09-2016 IPR006015 Universal stress protein A AMK01_RS06340 69a18e13c36b7f7e5982d1f2cf958462 139 PRINTS PR01438 Universal stress protein signature 114 136 9.3E-7 T 14-09-2016 IPR006015 Universal stress protein A AMK01_RS06340 69a18e13c36b7f7e5982d1f2cf958462 139 Gene3D G3DSA:3.40.50.620 2 134 2.2E-25 T 14-09-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK01_RS06340 69a18e13c36b7f7e5982d1f2cf958462 139 SUPERFAMILY SSF52402 1 136 7.62E-25 T 14-09-2016 AMK01_RS06340 69a18e13c36b7f7e5982d1f2cf958462 139 PANTHER PTHR31964 1 134 2.4E-14 T 14-09-2016 AMK01_RS09955 0eb661a16bd92db3a4b09375d39d9865 328 PANTHER PTHR30482:SF10 1 321 1.2E-125 T 14-09-2016 AMK01_RS09955 0eb661a16bd92db3a4b09375d39d9865 328 PANTHER PTHR30482 1 321 1.2E-125 T 14-09-2016 AMK01_RS09955 0eb661a16bd92db3a4b09375d39d9865 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 305 1.6E-43 T 14-09-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK01_RS11785 3b72af40ee6863efb0496f47358a0f9d 226 Gene3D G3DSA:3.40.190.10 15 144 1.5E-11 T 14-09-2016 AMK01_RS11785 3b72af40ee6863efb0496f47358a0f9d 226 SMART SM00062 16 226 0.0075 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS11785 3b72af40ee6863efb0496f47358a0f9d 226 SUPERFAMILY SSF53850 8 212 5.22E-23 T 14-09-2016 AMK01_RS11785 3b72af40ee6863efb0496f47358a0f9d 226 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 170 2.2E-15 T 14-09-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK01_RS16815 d288f065336cc231ea58bcb366eb39cf 123 Pfam PF04241 Protein of unknown function (DUF423) 25 103 1.6E-10 T 14-09-2016 IPR006696 Protein of unknown function DUF423 AMK01_RS12650 d963c4d680d7bc4581d9638317457781 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 304 2.0E-40 T 14-09-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AMK01_RS12650 d963c4d680d7bc4581d9638317457781 310 PANTHER PTHR30606:SF2 4 303 7.0E-59 T 14-09-2016 AMK01_RS12650 d963c4d680d7bc4581d9638317457781 310 PANTHER PTHR30606 4 303 7.0E-59 T 14-09-2016 AMK01_RS02185 cdc98b3a53ce6830f4d667fcfae0c850 144 SUPERFAMILY SSF55729 1 128 1.01E-25 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS02185 cdc98b3a53ce6830f4d667fcfae0c850 144 Pfam PF13673 Acetyltransferase (GNAT) domain 39 128 5.2E-12 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS02185 cdc98b3a53ce6830f4d667fcfae0c850 144 Gene3D G3DSA:3.40.630.30 1 130 4.4E-23 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS02185 cdc98b3a53ce6830f4d667fcfae0c850 144 PANTHER PTHR23091 1 127 2.8E-15 T 14-09-2016 AMK01_RS10120 9faa38e1a38ae64f8a8175a79db11fe7 59 Pfam PF12244 Protein of unknown function (DUF3606) 4 55 1.8E-17 T 14-09-2016 IPR022037 Protein of unknown function DUF3606 AMK01_RS18295 f20d6020f60a7281ad0434dca29e3eb8 101 Pfam PF06844 Protein of unknown function (DUF1244) 30 95 2.1E-36 T 14-09-2016 IPR023163 SMc04008-like domain AMK01_RS18295 f20d6020f60a7281ad0434dca29e3eb8 101 Gene3D G3DSA:1.10.3340.10 2 87 8.5E-44 T 14-09-2016 IPR023163 SMc04008-like domain AMK01_RS18295 f20d6020f60a7281ad0434dca29e3eb8 101 SUPERFAMILY SSF158757 4 80 3.27E-38 T 14-09-2016 IPR023163 SMc04008-like domain AMK01_RS13360 a1b4ca36eab4ad3d41c7671233315e07 140 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 43 139 9.0E-22 T 14-09-2016 IPR013423 Conserved hypothetical protein CHP02594 AMK01_RS19480 dbb44f8e903728c9e6bbf29f8919bf76 67 Pfam PF04588 Hypoxia induced protein conserved region 7 56 6.1E-12 T 14-09-2016 IPR007667 Hypoxia induced protein, domain AMK01_RS01915 a68e2c006d18eb8d6aa23401ac2a86b9 109 SUPERFAMILY SSF159894 8 102 4.18E-9 T 14-09-2016 AMK01_RS01915 a68e2c006d18eb8d6aa23401ac2a86b9 109 Pfam PF04993 TfoX N-terminal domain 16 101 2.3E-9 T 14-09-2016 IPR007076 TfoX, N-terminal AMK01_RS20770 2757b3ab00f8f30cecefea1bb9582124 320 Pfam PF08893 Domain of unknown function (DUF1839) 10 317 9.5E-143 T 14-09-2016 IPR014989 Protein of unknown function DUF1839 AMK01_RS11085 d22d00682091f63b75b9ea34cecdd35d 273 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 59 102 0.0021 T 14-09-2016 IPR010221 VCBS repeat AMK01_RS19935 8505a378a32905861a5d378c337bf2df 146 Gene3D G3DSA:3.40.630.30 34 135 3.8E-15 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19935 8505a378a32905861a5d378c337bf2df 146 SUPERFAMILY SSF55729 19 135 8.19E-17 T 14-09-2016 IPR016181 Acyl-CoA N-acyltransferase AMK01_RS19935 8505a378a32905861a5d378c337bf2df 146 Pfam PF13673 Acetyltransferase (GNAT) domain 44 135 1.5E-9 T 14-09-2016 IPR000182 GNAT domain GO:0008080 AMK01_RS15635 0fca5a2fd14983d82bd97d71d2bf2292 252 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 246 9.0E-76 T 14-09-2016 IPR018648 Protein of unknown function DUF2076 AMK01_RS01370 084489984b55eed6bb3268f06d9a8b24 96 Pfam PF06169 Protein of unknown function (DUF982) 15 79 3.0E-19 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS06595 acc22542705f8eb5f2faec52cf023d81 153 PANTHER PTHR30009 1 144 1.6E-25 T 14-09-2016 AMK01_RS06595 acc22542705f8eb5f2faec52cf023d81 153 Pfam PF03918 Cytochrome C biogenesis protein 11 151 1.9E-52 T 14-09-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family AMK01_RS05165 c160afad7901d8308dd2412ebd72855a 109 SUPERFAMILY SSF53335 2 101 3.82E-5 T 14-09-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS16285 ce91476c98d7b1435d64b5e3caf71f5f 367 Pfam PF14462 Prokaryotic E2 family E 242 362 1.7E-37 T 14-09-2016 IPR025701 Ubiquitin-conjugating enzyme, E2, family E AMK01_RS16285 ce91476c98d7b1435d64b5e3caf71f5f 367 Pfam PF14452 Multiubiquitin 90 154 5.9E-8 T 14-09-2016 IPR027802 Multi-ubiquitin domain AMK01_RS16285 ce91476c98d7b1435d64b5e3caf71f5f 367 Pfam PF14452 Multiubiquitin 22 85 3.4E-7 T 14-09-2016 IPR027802 Multi-ubiquitin domain AMK01_RS25495 3486673bc4efded72b7513e1ba872a91 80 Pfam PF03707 Bacterial signalling protein N terminal repeat 22 80 5.1E-17 T 14-09-2016 IPR005330 MHYT domain AMK01_RS13020 1726c199eb972b26daf78eb63f0e6933 159 Pfam PF13358 DDE superfamily endonuclease 5 126 7.5E-33 T 14-09-2016 AMK01_RS13020 1726c199eb972b26daf78eb63f0e6933 159 PANTHER PTHR23022 42 149 7.9E-13 T 14-09-2016 AMK01_RS15800 75563db193618f8513289849cf24d13d 63 Pfam PF10931 Protein of unknown function (DUF2735) 9 58 6.3E-21 T 14-09-2016 IPR021232 Protein of unknown function DUF2735 AMK01_RS01445 8958ccb92c6f5a00dee04c7b0fc2a110 183 Gene3D G3DSA:1.10.10.10 75 119 2.0E-6 T 14-09-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK01_RS01445 8958ccb92c6f5a00dee04c7b0fc2a110 183 Pfam PF02631 RecX family 62 169 2.0E-15 T 14-09-2016 IPR003783 Regulatory protein RecX GO:0006282 AMK01_RS08600 4010c920b9124840383da6f3d4a94036 117 PANTHER PTHR37549 1 117 1.4E-26 T 14-09-2016 AMK01_RS08600 4010c920b9124840383da6f3d4a94036 117 PANTHER PTHR37549:SF1 1 117 1.4E-26 T 14-09-2016 AMK01_RS10270 4fa1dba17e15ce91c93db1cd5a1b73b0 115 PANTHER PTHR36455:SF1 2 101 8.1E-37 T 14-09-2016 AMK01_RS10270 4fa1dba17e15ce91c93db1cd5a1b73b0 115 PANTHER PTHR36455 2 101 8.1E-37 T 14-09-2016 AMK01_RS10270 4fa1dba17e15ce91c93db1cd5a1b73b0 115 Pfam PF05717 IS66 Orf2 like protein 9 106 3.1E-37 T 14-09-2016 IPR008878 Transposase IS66, Orf2 AMK01_RS03815 b6f8a37457efc3c3402998ada9fb7c51 149 Pfam PF09361 Phasin protein 41 137 4.9E-18 T 14-09-2016 IPR018968 Phasin AMK01_RS03815 b6f8a37457efc3c3402998ada9fb7c51 149 TIGRFAM TIGR01985 phasin_2: phasin 21 141 7.4E-31 T 14-09-2016 IPR010234 Phasin, subfamily 2 AMK01_RS04760 d3d3161e6331657ab360798ee6715bc7 80 Pfam PF08972 Domain of unknown function (DUF1902) 6 71 1.0E-20 T 14-09-2016 IPR015066 Protein of unknown function DUF1902 AMK01_RS04760 d3d3161e6331657ab360798ee6715bc7 80 SUPERFAMILY SSF143100 5 67 1.22E-12 T 14-09-2016 AMK01_RS03045 4222e908786b713c91e61b43e64f9f9d 86 Pfam PF04972 BON domain 21 83 3.6E-7 T 14-09-2016 IPR007055 BON domain AMK01_RS01305 94324cf5add10a1039310e9568e37b87 412 Gene3D G3DSA:3.90.550.10 258 296 2.6E-34 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS01305 94324cf5add10a1039310e9568e37b87 412 Gene3D G3DSA:3.90.550.10 5 133 2.6E-34 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS01305 94324cf5add10a1039310e9568e37b87 412 SUPERFAMILY SSF53448 5 179 6.49E-35 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS01305 94324cf5add10a1039310e9568e37b87 412 PANTHER PTHR22916:SF23 5 147 4.8E-24 T 14-09-2016 AMK01_RS01305 94324cf5add10a1039310e9568e37b87 412 PANTHER PTHR22916:SF23 203 221 4.8E-24 T 14-09-2016 AMK01_RS01305 94324cf5add10a1039310e9568e37b87 412 PANTHER PTHR22916 5 147 4.8E-24 T 14-09-2016 AMK01_RS01305 94324cf5add10a1039310e9568e37b87 412 PANTHER PTHR22916 203 221 4.8E-24 T 14-09-2016 AMK01_RS01305 94324cf5add10a1039310e9568e37b87 412 Pfam PF00535 Glycosyl transferase family 2 7 150 2.6E-28 T 14-09-2016 IPR001173 Glycosyltransferase 2-like AMK01_RS01630 8c959889cf0bff5d2a054ef01984f25c 79 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 3 78 9.8E-41 T 14-09-2016 IPR020955 Uncharacterised protein family Atu4866 AMK01_RS11375 f055c04c3d6013093a91a4605ec1516c 170 Pfam PF04972 BON domain 95 160 2.9E-9 T 14-09-2016 IPR007055 BON domain AMK01_RS17155 2581e1b58a03beee5b31501fc0ced2a3 215 Pfam PF10090 Histidine phosphotransferase 31 208 1.7E-58 T 14-09-2016 IPR018762 Histidine phosphotransferase AMK01_RS12360 f5ffe569cef6388193cf133040ff3812 268 SUPERFAMILY SSF161098 48 262 1.31E-36 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12360 f5ffe569cef6388193cf133040ff3812 268 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 49 154 3.8E-15 T 14-09-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK01_RS12360 f5ffe569cef6388193cf133040ff3812 268 PANTHER PTHR30133 43 266 2.7E-69 T 14-09-2016 AMK01_RS12360 f5ffe569cef6388193cf133040ff3812 268 Gene3D G3DSA:1.10.3720.10 48 261 7.9E-39 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS12360 f5ffe569cef6388193cf133040ff3812 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 260 1.6E-15 T 14-09-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK01_RS05030 5b428baee0ebbb75182da4cea4b1c00e 109 SUPERFAMILY SSF54909 1 100 2.95E-20 T 14-09-2016 IPR011008 Dimeric alpha-beta barrel AMK01_RS05030 5b428baee0ebbb75182da4cea4b1c00e 109 Pfam PF07978 NIPSNAP 5 100 1.8E-25 T 14-09-2016 IPR012577 NIPSNAP AMK01_RS14385 a8f1d33a9054c03b77fce60060f68312 74 Pfam PF13467 Ribbon-helix-helix domain 3 65 7.4E-24 T 14-09-2016 IPR027373 Ribbon-helix-helix domain AMK01_RS07880 e74b3d99e93bece229040622212830ee 414 Pfam PF04932 O-Antigen ligase 198 337 2.8E-7 T 14-09-2016 IPR007016 O-antigen ligase-related AMK01_RS14495 693fc4ed0bd80d2c9c7dfcc91f8f1b94 243 Pfam PF03591 AzlC protein 16 155 1.7E-32 T 14-09-2016 IPR011606 Branched-chain amino acid transport, permease AMK01_RS14495 693fc4ed0bd80d2c9c7dfcc91f8f1b94 243 PANTHER PTHR34979 1 234 1.9E-35 T 14-09-2016 AMK01_RS13420 1bd4c72eef82eab6db02ef16d5747c7e 121 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 30 99 1.1E-11 T 14-09-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AMK01_RS08185 ae00453aeff463ec96c40661c5fb8b98 91 Pfam PF07330 Protein of unknown function (DUF1467) 5 83 2.8E-26 T 14-09-2016 IPR009935 Protein of unknown function DUF1467 AMK01_RS09485 6a4a9784b75b028adebffdb7655d3411 444 Pfam PF10908 Protein of unknown function (DUF2778) 323 427 3.3E-27 T 14-09-2016 IPR021225 Protein of unknown function DUF2778 AMK01_RS04680 89259d3a29253c34ee8fcf6f1d9960cc 133 Gene3D G3DSA:3.10.129.10 3 130 2.5E-14 T 14-09-2016 IPR029069 HotDog domain AMK01_RS04680 89259d3a29253c34ee8fcf6f1d9960cc 133 SUPERFAMILY SSF54637 8 129 6.91E-17 T 14-09-2016 IPR029069 HotDog domain AMK01_RS19980 bfccf1c316d0a5ca2edc81833e7ebf22 249 Pfam PF14025 Protein of unknown function (DUF4241) 61 231 2.3E-50 T 14-09-2016 IPR025335 Protein of unknown function DUF4241 AMK01_RS29585 07460cb1b734f27629735858a9c060da 69 Pfam PF06472 ABC transporter transmembrane region 2 3 62 6.8E-6 T 14-09-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK01_RS15965 2979d340b047ee19edb057a6709eba04 215 Pfam PF07290 Protein of unknown function (DUF1449) 9 198 4.9E-66 T 14-09-2016 IPR010840 Protein of unknown function DUF1449 AMK01_RS20210 20b9c22fe65389a8deed36bc538f5694 130 Pfam PF06803 Protein of unknown function (DUF1232) 63 97 7.9E-13 T 14-09-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 AMK01_RS20210 20b9c22fe65389a8deed36bc538f5694 130 PIRSF PIRSF031804 1 126 1.4E-45 T 14-09-2016 IPR016983 Uncharacterised conserved protein UCP031804 AMK01_RS07075 6335b587d7d01481e7acc70e2f189064 49 Pfam PF12086 Protein of unknown function (DUF3563) 15 45 7.3E-8 T 14-09-2016 IPR021946 Protein of unknown function DUF3563 AMK01_RS04215 9f18135619dc27cae9dfb55f459a7dfe 139 Pfam PF07681 DoxX 6 86 9.0E-18 T 14-09-2016 IPR032808 DoxX family AMK01_RS04215 9f18135619dc27cae9dfb55f459a7dfe 139 PANTHER PTHR33452 3 135 6.4E-21 T 14-09-2016 AMK01_RS06725 214bd711fedbed35e52f9c63afbd53aa 495 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 55 216 4.5E-18 T 14-09-2016 AMK01_RS17390 130db66dec640aa6ac289e9590be3cf2 448 SUPERFAMILY SSF53756 34 415 1.3E-41 T 14-09-2016 AMK01_RS17390 130db66dec640aa6ac289e9590be3cf2 448 Pfam PF00534 Glycosyl transferases group 1 257 392 1.2E-16 T 14-09-2016 IPR001296 Glycosyl transferase, family 1 AMK01_RS17390 130db66dec640aa6ac289e9590be3cf2 448 Gene3D G3DSA:3.40.50.2000 262 403 9.9E-21 T 14-09-2016 AMK01_RS17390 130db66dec640aa6ac289e9590be3cf2 448 PANTHER PTHR12526 196 403 9.3E-23 T 14-09-2016 AMK01_RS17390 130db66dec640aa6ac289e9590be3cf2 448 PANTHER PTHR12526 123 167 9.3E-23 T 14-09-2016 AMK01_RS13670 74c66e276b9f78783f8ff2c3ad607075 88 Pfam PF10041 Uncharacterized conserved protein (DUF2277) 1 78 1.8E-38 T 14-09-2016 IPR018735 Protein of unknown function DUF2277 AMK01_RS01210 7b9f818cb56f4705a6cde14e7e90cbcc 210 Pfam PF01810 LysE type translocator 16 205 1.1E-35 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS01210 7b9f818cb56f4705a6cde14e7e90cbcc 210 PANTHER PTHR30086 2 210 3.1E-36 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS13510 7b3b95f2cc4ebc673f3cddb246716011 141 Pfam PF08592 Domain of unknown function (DUF1772) 29 138 5.4E-6 T 14-09-2016 IPR013901 Protein of unknown function DUF1772 AMK01_RS02550 b7b9273296aa402869b03024d193aacf 160 Pfam PF08592 Domain of unknown function (DUF1772) 21 155 3.2E-19 T 14-09-2016 IPR013901 Protein of unknown function DUF1772 AMK01_RS13130 f87220e75786f95985538173f100181a 122 Pfam PF13316 Protein of unknown function (DUF4087) 19 114 3.7E-33 T 14-09-2016 IPR025145 Protein of unknown function DUF4087 AMK01_RS00510 ff45087a0e6a78a530d22ca048b0f8ed 127 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 123 1.1E-42 T 14-09-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid AMK01_RS00510 ff45087a0e6a78a530d22ca048b0f8ed 127 Pfam PF09538 Protein of unknown function (FYDLN_acid) 2 107 2.1E-23 T 14-09-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid AMK01_RS03585 6b71ece351a6b407993cf49bd32f13f8 480 Pfam PF02120 Flagellar hook-length control protein FliK 337 407 2.3E-14 T 14-09-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal AMK01_RS09055 a18e3cca9519fd4a59f5e35dc3dfa7f1 119 Pfam PF04120 Low affinity iron permease 5 115 2.6E-23 T 14-09-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 AMK01_RS03285 8a74c9f99cbbd15e4e4db5a8e1bc9a2a 76 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 6 45 1.7E-8 T 14-09-2016 IPR018691 Protein of unknown function DUF2188 AMK01_RS08885 d55f2969e78f6e2c5bf6261cca056805 124 PIRSF PIRSF033367 1 123 5.7E-56 T 14-09-2016 IPR017015 Uncharacterised conserved protein UCP033367, VanZ, Bll3170 AMK01_RS08885 d55f2969e78f6e2c5bf6261cca056805 124 Pfam PF04892 VanZ like family 42 106 1.4E-7 T 14-09-2016 IPR006976 VanZ-like AMK01_RS26800 dc7c644bdf37487f483b7a032d4cd022 240 Pfam PF02743 Cache domain 32 234 4.4E-12 T 14-09-2016 IPR033479 Double Cache domain 1 AMK01_RS26800 dc7c644bdf37487f483b7a032d4cd022 240 Gene3D G3DSA:3.30.450.20 161 238 1.5E-10 T 14-09-2016 AMK01_RS21380 fdbcc4f56468fa772446aad60489040b 405 Pfam PF13188 PAS domain 319 349 0.055 T 14-09-2016 IPR000014 PAS domain AMK01_RS21380 fdbcc4f56468fa772446aad60489040b 405 Gene3D G3DSA:3.30.450.20 194 299 3.0E-5 T 14-09-2016 AMK01_RS21380 fdbcc4f56468fa772446aad60489040b 405 SUPERFAMILY SSF55785 297 357 3.98E-5 T 14-09-2016 IPR000014 PAS domain AMK01_RS13095 57ed7b1733775e7fd85ae12756787caa 503 Pfam PF08811 Protein of unknown function (DUF1800) 9 502 4.2E-123 T 14-09-2016 IPR014917 Protein of unknown function DUF1800 AMK01_RS00530 083523d957cf7c768e3f1c2b42e35ddb 111 Pfam PF11171 Protein of unknown function (DUF2958) 2 110 1.5E-39 T 14-09-2016 IPR021341 Protein of unknown function DUF2958 AMK01_RS02190 7740b70d3f8874ad9d0240270da59dc4 110 Pfam PF06305 Protein of unknown function (DUF1049) 25 85 1.8E-5 T 14-09-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AMK01_RS19245 823bc9462ebd72a17080eadaf9cb9899 116 Pfam PF13467 Ribbon-helix-helix domain 16 83 1.3E-25 T 14-09-2016 IPR027373 Ribbon-helix-helix domain AMK01_RS20995 113c03bba0351ce284b031eb85cf95ce 68 Pfam PF08410 Domain of unknown function (DUF1737) 1 52 9.8E-29 T 14-09-2016 IPR013619 Domain of unknown function DUF1737 AMK01_RS11655 3700142df87378a9d56e9fc7252be1c3 267 Pfam PF09955 Predicted integral membrane protein (DUF2189) 72 198 8.3E-40 T 14-09-2016 IPR018692 Predicted integral membrane protein DUF2189 AMK01_RS03440 0f735a7c19ef90d8b83188382244a3a4 146 PIRSF PIRSF034217 1 144 2.3E-72 T 14-09-2016 IPR017024 Uncharacterised conserved protein UCP034217 AMK01_RS14060 d64ec2d2804b03b0f65fc008aab91530 582 Gene3D G3DSA:3.90.1200.10 356 402 2.8E-4 T 14-09-2016 AMK01_RS13845 c4f422e3d14cbeaf80ebefd2b17771dc 250 SUPERFAMILY SSF81301 19 97 8.18E-9 T 14-09-2016 AMK01_RS13845 c4f422e3d14cbeaf80ebefd2b17771dc 250 Gene3D G3DSA:3.30.460.10 30 112 6.9E-13 T 14-09-2016 AMK01_RS13090 c077639ad6864ba86feba0bbfbb501f1 390 Pfam PF07394 Protein of unknown function (DUF1501) 37 366 4.6E-36 T 14-09-2016 IPR010869 Protein of unknown function DUF1501 AMK01_RS11505 2159040199c4678a5c18b9dba7750be5 101 Pfam PF00460 Flagella basal body rod protein 8 36 1.3E-5 T 14-09-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AMK01_RS11505 2159040199c4678a5c18b9dba7750be5 101 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 46 96 7.5E-6 T 14-09-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMK01_RS09295 60f10a4546634ca6ab19c102418dd5ac 364 Pfam PF09925 Predicted membrane protein (DUF2157) 13 149 2.7E-31 T 14-09-2016 IPR018677 Domain of unknown function DUF2157 AMK01_RS06575 019659d3918b4d3734b8a3191a45796d 141 PIRSF PIRSF002721 1 141 1.7E-52 T 14-09-2016 IPR016364 Surface antigen, Rickettsia type AMK01_RS22940 1eeca4e2747e89a65f432687ab133146 61 Gene3D G3DSA:1.10.1860.10 3 61 5.5E-21 T 14-09-2016 AMK01_RS22940 1eeca4e2747e89a65f432687ab133146 61 Pfam PF01274 Malate synthase 19 60 2.0E-5 T 14-09-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS22940 1eeca4e2747e89a65f432687ab133146 61 SUPERFAMILY SSF51645 3 61 4.32E-16 T 14-09-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 AMK01_RS20150 fa233e8b9e71c46db51ed6431089faec 213 PANTHER PTHR30086 1 208 4.6E-17 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS20150 fa233e8b9e71c46db51ed6431089faec 213 Pfam PF01810 LysE type translocator 15 200 6.9E-17 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS09235 b7c7935df94e1c86650fb14b163db50d 129 Gene3D G3DSA:1.20.5.510 93 119 6.0E-4 T 14-09-2016 AMK01_RS09235 b7c7935df94e1c86650fb14b163db50d 129 Pfam PF13564 DoxX-like family 19 109 7.3E-14 T 14-09-2016 IPR032808 DoxX family AMK01_RS16710 880e814a01983f0fcf6769b156559aff 80 Pfam PF13619 KTSC domain 20 76 4.0E-14 T 14-09-2016 IPR025309 KTSC domain AMK01_RS10400 2140cee3dbd1cd657333920e1ae63d53 85 Pfam PF06169 Protein of unknown function (DUF982) 8 79 8.4E-25 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS04095 850d9e1fb8f8338dbeb8c8a1a5911fb8 99 Pfam PF06568 Domain of unknown function (DUF1127) 38 64 5.6E-6 T 14-09-2016 IPR009506 Protein of unknown function DUF1127 AMK01_RS09445 f8377599f0190e2516dbbad84dc08042 146 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 38 129 1.1E-35 T 14-09-2016 IPR019225 Protein of unknown function DUF2155 AMK01_RS06885 07e4eca903e8eddcb624e16755e931d6 341 Gene3D G3DSA:2.40.160.10 57 331 4.3E-28 T 14-09-2016 IPR023614 Porin domain AMK01_RS06885 07e4eca903e8eddcb624e16755e931d6 341 SUPERFAMILY SSF56935 57 341 7.5E-17 T 14-09-2016 AMK01_RS06885 07e4eca903e8eddcb624e16755e931d6 341 Pfam PF02530 Porin subfamily 24 325 3.6E-92 T 14-09-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 AMK01_RS07610 a85a14b95a8efd706f03a31c469a2432 353 Gene3D G3DSA:3.30.70.1230 159 337 1.1E-25 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS07610 a85a14b95a8efd706f03a31c469a2432 353 SUPERFAMILY SSF55073 150 335 2.2E-38 T 14-09-2016 IPR029787 Nucleotide cyclase AMK01_RS07610 a85a14b95a8efd706f03a31c469a2432 353 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 160 331 5.7E-18 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS07610 a85a14b95a8efd706f03a31c469a2432 353 SMART SM00044 128 318 0.0034 T 14-09-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AMK01_RS06230 4b3637124f25504ac8662b401386fc08 222 Gene3D G3DSA:1.10.472.60 68 175 5.8E-18 T 14-09-2016 IPR023169 UPF0413, central domain AMK01_RS06230 4b3637124f25504ac8662b401386fc08 222 SUPERFAMILY SSF52833 5 218 9.61E-21 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS06230 4b3637124f25504ac8662b401386fc08 222 Gene3D G3DSA:3.40.30.10 3 67 5.0E-19 T 14-09-2016 IPR012336 Thioredoxin-like fold AMK01_RS10145 b8ca3d9133eeae3329cb5ea269762864 101 Pfam PF06169 Protein of unknown function (DUF982) 10 81 2.8E-24 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS05990 19afc24c113c0b083a3213323599af57 268 PANTHER PTHR10992 32 266 5.1E-55 T 14-09-2016 AMK01_RS05990 19afc24c113c0b083a3213323599af57 268 Gene3D G3DSA:3.40.50.1820 31 266 1.6E-57 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS05990 19afc24c113c0b083a3213323599af57 268 Pfam PF12697 Alpha/beta hydrolase family 47 259 5.8E-19 T 14-09-2016 IPR000073 Alpha/beta hydrolase fold-1 AMK01_RS05990 19afc24c113c0b083a3213323599af57 268 SUPERFAMILY SSF53474 14 265 9.89E-60 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS15350 bd1361a3469da760b05658e8628c8317 69 Gene3D G3DSA:3.20.10.10 4 59 3.1E-10 T 14-09-2016 AMK01_RS15350 bd1361a3469da760b05658e8628c8317 69 SUPERFAMILY SSF56752 4 62 2.09E-11 T 14-09-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK01_RS11970 e4edc24cdff975ecef6029600e426bfd 208 Pfam PF06037 Bacterial protein of unknown function (DUF922) 36 195 6.3E-53 T 14-09-2016 IPR010321 Protein of unknown function DUF922 AMK01_RS11970 e4edc24cdff975ecef6029600e426bfd 208 PIRSF PIRSF010521 2 204 2.2E-61 T 14-09-2016 IPR010321 Protein of unknown function DUF922 AMK01_RS21040 384597e62c740a9bc7df413c6ba27787 423 Pfam PF02687 FtsX-like permease family 306 411 3.8E-15 T 14-09-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK01_RS21040 384597e62c740a9bc7df413c6ba27787 423 PANTHER PTHR30489 227 423 8.8E-15 T 14-09-2016 AMK01_RS06915 02cb8940a6ca26809ac8a485f39b6001 439 Pfam PF04932 O-Antigen ligase 207 350 4.8E-8 T 14-09-2016 IPR007016 O-antigen ligase-related AMK01_RS21740 af0264aae8d691f1d761d9cd44066701 260 SUPERFAMILY SSF52540 179 240 8.57E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21740 af0264aae8d691f1d761d9cd44066701 260 SUPERFAMILY SSF52540 30 149 8.57E-11 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21740 af0264aae8d691f1d761d9cd44066701 260 Gene3D G3DSA:3.40.50.300 32 107 4.4E-7 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21740 af0264aae8d691f1d761d9cd44066701 260 Gene3D G3DSA:3.40.50.300 176 241 4.4E-7 T 14-09-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK01_RS21740 af0264aae8d691f1d761d9cd44066701 260 Pfam PF04851 Type III restriction enzyme, res subunit 32 238 6.0E-20 T 14-09-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK01_RS11210 0c7d50b7105f599cb0ea0deb69ce1ad2 299 Gene3D G3DSA:3.40.50.1820 118 296 7.0E-14 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS11210 0c7d50b7105f599cb0ea0deb69ce1ad2 299 SUPERFAMILY SSF53474 102 297 4.93E-18 T 14-09-2016 IPR029058 Alpha/Beta hydrolase fold AMK01_RS01165 bb7cc313b7cbfc3497927770f1878157 61 Pfam PF04964 Flp/Fap pilin component 8 53 1.7E-20 T 14-09-2016 IPR007047 Flp/Fap pilin component AMK01_RS09790 4abe9815226703296a5edab108758529 106 Pfam PF04977 Septum formation initiator 23 100 1.9E-19 T 14-09-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AMK01_RS14950 16f54b25fefd84d6a7b389b8130e66bd 136 Pfam PF13778 Domain of unknown function (DUF4174) 23 133 1.2E-16 T 14-09-2016 IPR025232 Domain of unknown function DUF4174 AMK01_RS05345 6e50958e6febb17537fdaeacfd99bbbe 91 Pfam PF14026 Protein of unknown function (DUF4242) 4 82 2.0E-19 T 14-09-2016 IPR025336 Protein of unknown function DUF4242 AMK01_RS15260 53ab31554fa6609df1f16eb225455918 95 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 6 67 3.5E-13 T 14-09-2016 IPR018691 Protein of unknown function DUF2188 AMK01_RS12785 f954113071b3ea5e81ba3dc4df165709 202 PANTHER PTHR30086:SF0 1 199 9.2E-76 T 14-09-2016 AMK01_RS12785 f954113071b3ea5e81ba3dc4df165709 202 PANTHER PTHR30086 1 199 9.2E-76 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS12785 f954113071b3ea5e81ba3dc4df165709 202 Pfam PF01810 LysE type translocator 14 199 6.6E-39 T 14-09-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AMK01_RS04115 12c31b4f52f5b6f19dff62453d2084ec 499 Pfam PF01384 Phosphate transporter family 78 487 6.5E-110 T 14-09-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 AMK01_RS04115 12c31b4f52f5b6f19dff62453d2084ec 499 PANTHER PTHR11101 459 493 1.1E-109 T 14-09-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 AMK01_RS04115 12c31b4f52f5b6f19dff62453d2084ec 499 PANTHER PTHR11101 49 424 1.1E-109 T 14-09-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 AMK01_RS17740 a93fe11f37f4212a7445084f2b959622 244 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 4 229 8.3E-68 T 14-09-2016 IPR012666 Cobalt transporter subunit CbtA, putative AMK01_RS05185 4efe8350e555b6b102c36d4dfca7a1fe 379 Pfam PF14088 Domain of unknown function (DUF4268) 228 363 2.9E-36 T 14-09-2016 IPR025364 Domain of unknown function DUF4268 AMK01_RS13185 6aba39e18a2da21d8f326ea8ad8dc723 155 Pfam PF12883 Protein of unknown function (DUF3828) 51 140 3.8E-9 T 14-09-2016 IPR024289 Domain of unknown function DUF3828 AMK01_RS19105 d90ff9b587351caf8a3350e50c7da7bb 131 Pfam PF07681 DoxX 7 88 1.3E-6 T 14-09-2016 IPR032808 DoxX family AMK01_RS07745 efe22d471a34e4b67a1cfd04a8803184 183 Pfam PF02620 Uncharacterized ACR, COG1399 65 178 8.1E-13 T 14-09-2016 IPR003772 Protein of unknown function DUF177 AMK01_RS09135 4e548ada9baa8ed2c8422c404dd0aabc 290 Pfam PF10691 Protein of unknown function (DUF2497) 220 286 3.8E-24 T 14-09-2016 IPR019632 Protein of unknown function DUF2497 AMK01_RS16600 f7bbe7a05f49e358a3f21ef99bdcea24 343 Pfam PF04230 Polysaccharide pyruvyl transferase 41 293 1.7E-27 T 14-09-2016 IPR007345 Polysaccharide pyruvyl transferase AMK01_RS01070 cc7d9bc5718e9777fd413d615da0925b 69 Pfam PF13619 KTSC domain 8 64 3.1E-12 T 14-09-2016 IPR025309 KTSC domain AMK01_RS14080 79a5368215c54aa0891a5ffc767c571e 433 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 151 319 1.0E-33 T 14-09-2016 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal AMK01_RS14080 79a5368215c54aa0891a5ffc767c571e 433 Pfam PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term 63 142 9.3E-16 T 14-09-2016 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal AMK01_RS09830 7ef39b9f8e5bc8e3dd39651dc440eace 82 Pfam PF04226 Transglycosylase associated protein 34 82 2.8E-13 T 14-09-2016 IPR007341 Transglycosylase-associated protein GO:0016021 AMK01_RS04840 93f0e73f6c2e70af93e3a2c039d22b1a 210 Pfam PF06776 Invasion associated locus B (IalB) protein 76 209 4.1E-37 T 14-09-2016 IPR010642 Invasion protein B AMK01_RS16370 e4ece4f5f4546ffea7f9f77e7aeb17e5 147 Pfam PF07681 DoxX 30 104 8.2E-13 T 14-09-2016 IPR032808 DoxX family AMK01_RS17165 7ea8e9b6031038718873daeeed8d3ed4 386 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 65 251 1.0E-4 T 14-09-2016 AMK01_RS12205 5a1b22e2d1091a9a2ca26ec309b51e9d 124 PANTHER PTHR35303 1 122 4.6E-38 T 14-09-2016 AMK01_RS12205 5a1b22e2d1091a9a2ca26ec309b51e9d 124 Pfam PF06155 Protein of unknown function (DUF971) 10 93 1.6E-27 T 14-09-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 AMK01_RS09670 383e9d9cbb703ac1e4a1a388a6b8a028 278 Pfam PF08904 Domain of unknown function (DUF1849) 28 271 1.2E-91 T 14-09-2016 IPR015000 Protein of unknown function DUF1849 AMK01_RS12850 eaae3ad0fb7d72b71b88896313ddffab 159 PANTHER PTHR23022 42 149 1.3E-12 T 14-09-2016 AMK01_RS12850 eaae3ad0fb7d72b71b88896313ddffab 159 Pfam PF13358 DDE superfamily endonuclease 5 126 7.5E-33 T 14-09-2016 AMK01_RS08235 5056ff5febf72aaac49de66d4df59413 102 Pfam PF12096 Protein of unknown function (DUF3572) 14 93 6.1E-32 T 14-09-2016 IPR021955 Protein of unknown function DUF3572 AMK01_RS07735 b9a34fcec887c989ee446593430c31b8 177 Pfam PF04355 SmpA / OmlA family 42 116 1.6E-19 T 14-09-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AMK01_RS04880 ec3c65e54f85154ef7f08268b7546c8f 126 Pfam PF06170 Protein of unknown function (DUF983) 31 115 8.9E-34 T 14-09-2016 IPR009325 Protein of unknown function DUF983 AMK01_RS16270 175add750e8bd6ef8b375429397da19a 261 Pfam PF06114 Domain of unknown function (DUF955) 58 158 2.0E-12 T 14-09-2016 IPR010359 HTH domain, IrrE-type AMK01_RS02265 d6176048479f20827d1bf8f5f02c72e7 86 SUPERFAMILY SSF47598 3 68 2.22E-13 T 14-09-2016 IPR010985 Ribbon-helix-helix GO:0006355 AMK01_RS02265 d6176048479f20827d1bf8f5f02c72e7 86 Gene3D G3DSA:1.10.1220.10 10 48 2.5E-5 T 14-09-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMK01_RS01275 fef1d84dd75e3daa19ec68a60762183b 338 PANTHER PTHR23028 5 315 4.0E-25 T 14-09-2016 AMK01_RS01275 fef1d84dd75e3daa19ec68a60762183b 338 Pfam PF01757 Acyltransferase family 4 318 5.7E-26 T 14-09-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK01_RS17995 98917e467465575cae44cc0f4dc66ada 125 Pfam PF07681 DoxX 10 88 1.2E-8 T 14-09-2016 IPR032808 DoxX family AMK01_RS08895 44533222fc237876441fef8c8a52c91c 108 Pfam PF10115 Transcriptional activator HlyU 3 99 9.9E-35 T 14-09-2016 IPR018772 Transcription activator HlyU AMK01_RS07920 b672febb3381d02e4e7343ae5e769c74 263 Pfam PF01925 Sulfite exporter TauE/SafE 27 252 9.8E-20 T 14-09-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 AMK01_RS16590 375f95b8331bb9fdb3e4e8b9fedea551 300 Pfam PF04230 Polysaccharide pyruvyl transferase 37 185 2.3E-7 T 14-09-2016 IPR007345 Polysaccharide pyruvyl transferase AMK01_RS03990 ab862e2cf6f63088196179d650b6b09e 275 Gene3D G3DSA:3.90.1480.10 41 273 3.7E-28 T 14-09-2016 AMK01_RS09285 89c05eb141dd1d045a3788836bbbe56e 47 Pfam PF06568 Domain of unknown function (DUF1127) 5 39 1.4E-13 T 14-09-2016 IPR009506 Protein of unknown function DUF1127 AMK01_RS17460 4e552a7e5907c134b94e25c20d668ee7 164 Pfam PF03713 Domain of unknown function (DUF305) 106 155 7.6E-11 T 14-09-2016 IPR005183 Domain of unknown function DUF305 AMK01_RS17460 4e552a7e5907c134b94e25c20d668ee7 164 Gene3D G3DSA:1.20.1260.10 34 158 5.3E-22 T 14-09-2016 IPR012347 Ferritin-related AMK01_RS05695 5e27fdeb725bff45cd613e60ea4acfc6 230 Pfam PF08889 WbqC-like protein family 8 223 9.0E-80 T 14-09-2016 IPR014985 WbqC-like protein family AMK01_RS00645 d0fbf5285af854f32a6b13f3913e2d9f 78 Pfam PF11391 Protein of unknown function (DUF2798) 17 75 4.7E-16 T 14-09-2016 IPR021529 Protein of unknown function DUF2798 AMK01_RS20090 72ada506004d8d4b11c77b6df59045e7 417 Pfam PF16331 TolA binding protein trimerisation 169 239 5.6E-7 T 14-09-2016 IPR032519 YbgF, trimerisation domain GO:0070206 AMK01_RS04100 0f375022b8dcc546cc76b684d4048a1d 293 Pfam PF06078 Bacterial protein of unknown function (DUF937) 6 137 1.4E-25 T 14-09-2016 IPR009282 Protein of unknown function DUF937 AMK01_RS07345 df35058f585e466b5e134970e8bdcce6 100 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 96 3.1E-18 T 14-09-2016 IPR008407 Branched-chain amino acid transport, AzlD AMK01_RS03165 b049810a25e9d244bd3793baadf446fe 258 Pfam PF09836 Putative DNA-binding domain 6 97 3.8E-26 T 14-09-2016 IPR018640 Putative DNA-binding domain, bacteria AMK01_RS04435 25d6c74d2cc3b7b36f9107d462931f70 172 SUPERFAMILY SSF53448 2 111 7.88E-9 T 14-09-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK01_RS07780 209c5bf9a03a9d4f871d4a9e25f54071 104 Pfam PF06823 Protein of unknown function (DUF1236) 44 104 1.4E-21 T 14-09-2016 IPR009642 Protein of unknown function DUF1236 AMK01_RS10340 515f016512959419226c4efbfe1cf6ad 129 Pfam PF03412 Peptidase C39 family 3 95 7.8E-5 T 14-09-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AMK01_RS10345 d2b6204a35a1757744ad2c1e031545e6 259 Pfam PF13643 Domain of unknown function (DUF4145) 134 209 7.3E-15 T 14-09-2016 IPR025285 Domain of unknown function DUF4145 AMK01_RS05540 fd6ef791ba45f86c1787ca0ce3a5ffc5 82 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 77 4.4E-16 T 14-09-2016 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AMK01_RS12405 313ce1f2ede5073ba25239fb641e21ac 156 SUPERFAMILY SSF159888 43 154 4.58E-30 T 14-09-2016 AMK01_RS12405 313ce1f2ede5073ba25239fb641e21ac 156 Pfam PF08818 Domain of unknown function (DU1801) 57 148 1.2E-16 T 14-09-2016 IPR014922 Domain of unknown function DUF1801 AMK01_RS13835 ed3b1d60b44aa92534d050088edf01ff 185 Pfam PF03729 Short repeat of unknown function (DUF308) 76 143 1.3E-6 T 14-09-2016 IPR005325 Protein of unknown function DUF308, membrane AMK01_RS05070 3fe0dc44acb64cc813e503a17659db7a 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 91 3.1E-11 T 14-09-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AMK01_RS17440 b1be165afe2edf9d5627c35aaec79c3f 369 Pfam PF01757 Acyltransferase family 16 329 2.8E-13 T 14-09-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK01_RS21155 56221d427a605c1b7f9a9777a866cdb9 173 Pfam PF04390 Lipopolysaccharide-assembly 19 161 5.6E-12 T 14-09-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AMK01_RS15085 0df152843e3911f19ba0e2ec1a0d9de2 97 Pfam PF08734 GYD domain 4 92 2.3E-29 T 14-09-2016 IPR014845 Uncharacterised protein GYD AMK01_RS05750 4639b60da825c2a986f1b1fbb5957bb8 542 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 70 226 1.0E-4 T 14-09-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 AMK01_RS09690 dc6f5f7fac04fb22d081d04993423b78 368 Pfam PF13531 Bacterial extracellular solute-binding protein 67 325 1.9E-9 T 14-09-2016 AMK01_RS10390 cec972333e40b04ff39c63c2c10b61fb 93 Pfam PF06169 Protein of unknown function (DUF982) 7 76 2.3E-16 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS00095 f7c99858d289b8ef322c0880d91f3e22 144 Pfam PF11014 Protein of unknown function (DUF2852) 8 128 2.0E-42 T 14-09-2016 IPR021273 Protein of unknown function DUF2852 AMK01_RS11180 e1fe7359bd1e995989442e503b7f0f29 172 Pfam PF04773 FecR protein 35 126 3.1E-8 T 14-09-2016 IPR006860 FecR protein AMK01_RS30335 ea0d5022133868fd49e4af75bdce9e84 310 Pfam PF13844 Glycosyl transferase family 41 252 301 8.0E-12 T 14-09-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 AMK01_RS30335 ea0d5022133868fd49e4af75bdce9e84 310 Pfam PF13844 Glycosyl transferase family 41 90 238 8.8E-22 T 14-09-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 AMK01_RS13060 c4f6473f19aa1b36f2c2e0b468ea822f 115 SUPERFAMILY SSF74924 4 64 3.67E-6 T 14-09-2016 IPR000938 CAP Gly-rich domain AMK01_RS04325 a2155f60a06391ec86ea46f87de3db97 76 Pfam PF09866 Uncharacterized protein conserved in bacteria (DUF2093) 23 62 2.9E-22 T 14-09-2016 IPR018661 Protein of unknown function DUF2093 AMK01_RS02400 561cabacc519348ac8a3b40789972590 81 Pfam PF06169 Protein of unknown function (DUF982) 7 78 5.0E-25 T 14-09-2016 IPR010385 Protein of unknown function DUF982 AMK01_RS11355 e89957eed09245c48c0a54759d6f1b6c 329 Pfam PF07786 Protein of unknown function (DUF1624) 16 243 5.3E-70 T 14-09-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 AMK01_RS11125 dfc01fc99f4028587754d8240a2ea6de 84 Pfam PF04226 Transglycosylase associated protein 36 84 2.6E-14 T 14-09-2016 IPR007341 Transglycosylase-associated protein GO:0016021 AMK01_RS14085 3471d90f933e94f5a375dc521440ed2f 353 Pfam PF04230 Polysaccharide pyruvyl transferase 14 291 1.1E-31 T 14-09-2016 IPR007345 Polysaccharide pyruvyl transferase