RB10002 PF08240 Alcohol dehydrogenase GroES-like domain RB10002 PF16912 RB10002 RB10004 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RB10006 PF01243 Pyridoxamine 5'-phosphate oxidase RB10006 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RB10007 PF02622 Uncharacterized ACR, COG1678 RB10009 PF00313 'Cold-shock' DNA-binding domain RB10010 PF07624 RB10010 RB10010 PF07626 RB10010 RB10010 PF07627 RB10010 RB10010 PF07631 RB10010 RB10010 PF07635 RB10010 RB10010 PF07637 RB10010 RB10014 PF07586 RB10014 RB10025 PF01841 Transglutaminase-like superfamily RB10025 PF08379 RB10025 RB10026 PF04168 RB10026 RB10026 PF14403 RB10026 RB10027 PF01841 Transglutaminase-like superfamily RB10027 PF08379 RB10027 RB10027 PF09899 RB10027 RB10028 PF04168 RB10028 RB10030 PF14403 RB10030 RB10033 PF00149 Calcineurin-like phosphoesterase RB10035 PF13360 PQQ-like domain RB10036 PF02585 GlcNAc-PI de-N-acetylase RB10038 PF00668 Condensation domain RB10039 PF13181 Tetratricopeptide repeat RB10039 PF13432 Tetratricopeptide repeat RB10039 PF14559 Tetratricopeptide repeat RB10040 PF13435 Cytochrome c554 and c-prime RB10045 PF07596 RB10045 RB10045 PF13633 Prokaryotic N-terminal methylation site RB10048 PF03629 Domain of unknown function (DUF303) RB10049 PF04542 Sigma-70 region 2 RB10049 PF08281 Sigma-70, region 4 RB10051 PF07583 RB10051 RB10051 PF07587 RB10051 RB10051 PF07635 RB10051 RB10053 PF07394 RB10053 RB10055 PF04932 RB10055 RB10060 PF12840 Helix-turn-helix domain RB10061 PF02492 CobW/HypB/UreG, nucleotide-binding domain RB10062 PF01266 FAD dependent oxidoreductase RB10065 PF13487 HD domain RB10069 PF08308 RB10069 RB10074 PF08241 Methyltransferase domain RB10078 PF10459 Peptidase S46 RB10081 PF00005 ABC transporter RB10081 PF00664 ABC transporter transmembrane region RB10088 PF06778 Chlorite dismutase RB10089 PF01261 Xylose isomerase-like TIM barrel RB1009 PF01966 HD domain RB10092 PF01557 Fumarylacetoacetate (FAA) hydrolase family RB10096 PF01548 RB10096 RB10096 PF02371 RB10096 RB10097 PF07629 RB10097 RB10099 PF07596 RB10099 RB10099 PF13633 Prokaryotic N-terminal methylation site RB101 PF00326 Prolyl oligopeptidase family RB101 PF07676 WD40-like Beta Propeller Repeat RB10103 PF01344 Kelch motif RB10105 PF07621 RB10105 RB10106 PF03091 CutA1 divalent ion tolerance protein RB10108 PF00712 DNA polymerase III beta subunit, N-terminal domain RB10108 PF02767 DNA polymerase III beta subunit, central domain RB10108 PF02768 DNA polymerase III beta subunit, C-terminal domain RB10109 PF05258 RB10109 RB10112 PF00977 Histidine biosynthesis protein RB10113 PF01808 AICARFT/IMPCHase bienzyme RB10113 PF02142 MGS-like domain RB10114 PF00218 Indole-3-glycerol phosphate synthase RB10116 PF00884 Sulfatase RB10117 PF00884 Sulfatase RB10119 PF00069 Protein kinase domain RB10119 PF16868 RB10119 RB10120 PF04542 Sigma-70 region 2 RB10120 PF08281 Sigma-70, region 4 RB10124 PF13360 PQQ-like domain RB10127 PF07995 Glucose / Sorbosone dehydrogenase RB10129 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RB10129 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RB1013 PF13514 AAA domain RB10133 PF00069 Protein kinase domain RB10134 PF00829 Ribosomal prokaryotic L21 protein RB10137 PF07629 RB10137 RB10138 PF06439 Domain of Unknown Function (DUF1080) RB10140 PF00916 RB10140 RB10140 PF01740 STAS domain RB10144 PF00326 Prolyl oligopeptidase family RB10148 PF07589 RB10148 RB10149 PF07595 RB10149 RB10149 PF07705 CARDB RB10159 PF00404 Dockerin type I repeat RB10159 PF07595 RB10159 RB10160 PF00069 Protein kinase domain RB10160 PF00400 WD domain, G-beta repeat RB10164 PF07638 ECF sigma factor RB10165 PF01841 Transglutaminase-like superfamily RB10165 PF06452 Domain of unknown function (DUF1083) RB10170 PF00291 Pyridoxal-phosphate dependent enzyme RB10172 PF00171 Aldehyde dehydrogenase family RB10175 PF03641 Possible lysine decarboxylase RB10177 PF01969 Protein of unknown function DUF111 RB10180 PF01432 Peptidase family M3 RB10180 PF08439 Oligopeptidase F RB10181 PF00005 ABC transporter RB10182 PF05016 Plasmid stabilisation system protein RB10184 PF03693 Uncharacterised protein family (UPF0156) RB10188 PF14681 Uracil phosphoribosyltransferase RB10192 PF01979 Amidohydrolase family RB10195 PF06283 Trehalose utilisation RB10196 PF07498 Rho termination factor, N-terminal domain RB10196 PF16258 RB10196 RB10202 PF09527 RB10202 RB10206 PF00119 ATP synthase A chain RB10209 PF00137 ATP synthase subunit C RB10211 PF00430 ATP synthase B/B' CF(0) RB10213 PF00213 ATP synthase delta (OSCP) subunit RB10215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RB10215 PF00306 ATP synthase alpha/beta chain, C terminal domain RB10215 PF02874 ATP synthase alpha/beta family, beta-barrel domain RB10216 PF00231 ATP synthase RB10217 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RB10217 PF02874 ATP synthase alpha/beta family, beta-barrel domain RB10219 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RB1022 PF08450 SMP-30/Gluconolaconase/LRE-like region RB10221 PF13676 TIR domain RB10227 PF00437 Type II/IV secretion system protein RB10228 PF00437 Type II/IV secretion system protein RB10231 PF00591 Glycosyl transferase family, a/b domain RB10231 PF02885 Glycosyl transferase family, helical bundle domain RB10231 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RB10232 PF00884 Sulfatase RB10235 PF00857 Isochorismatase family RB10238 PF07596 RB10238 RB10240 PF07596 RB10240 RB10242 PF00226 DnaJ domain RB10242 PF01556 DnaJ C terminal domain RB10245 PF00561 alpha/beta hydrolase fold RB10246 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RB10249 PF13180 PDZ domain RB10252 PF00583 Acetyltransferase (GNAT) family RB10255 PF00924 Mechanosensitive ion channel RB10258 PF01975 Survival protein SurE RB10261 PF02599 Global regulator protein family RB10264 PF01008 Initiation factor 2 subunit family RB10266 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB10269 PF13653 Glycerophosphoryl diester phosphodiesterase family RB1027 PF00534 Glycosyl transferases group 1 RB10270 PF01593 Flavin containing amine oxidoreductase RB10271 PF00075 RNase H RB10272 PF13561 Enoyl-(Acyl carrier protein) reductase RB10275 PF04055 Radical SAM superfamily RB10275 PF06968 Biotin and Thiamin Synthesis associated domain RB10277 PF00224 Pyruvate kinase, barrel domain RB10277 PF02887 Pyruvate kinase, alpha/beta domain RB10279 PF00011 Hsp20/alpha crystallin family RB10283 PF00011 Hsp20/alpha crystallin family RB10292 PF07639 RB10292 RB10295 PF01488 Shikimate / quinate 5-dehydrogenase RB10295 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal RB10297 PF08714 Formaldehyde-activating enzyme (Fae) RB10299 PF02655 ATP-grasp domain RB10300 PF12904 Putative collagen-binding domain of a collagenase RB10300 PF16586 RB10300 RB10305 PF11015 Protein of unknown function (DUF2853) RB10307 PF01212 Beta-eliminating lyase RB10308 PF00072 Response regulator receiver domain RB10308 PF00990 GGDEF domain RB10309 PF00083 Sugar (and other) transporter RB10310 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RB10313 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RB10313 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RB10314 PF10070 RB10314 RB10322 PF00512 His Kinase A (phospho-acceptor) domain RB10322 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB10322 PF08448 PAS fold RB10323 PF00072 Response regulator receiver domain RB10323 PF00158 Sigma-54 interaction domain RB10323 PF02954 Bacterial regulatory protein, Fis family RB10326 PF00916 RB10326 RB10327 PF01253 Translation initiation factor SUI1 RB10328 PF12847 Methyltransferase domain RB10329 PF00069 Protein kinase domain RB10329 PF00072 Response regulator receiver domain RB1033 PF13036 Protein of unknown function (DUF3897) RB10330 PF00072 Response regulator receiver domain RB10330 PF00512 His Kinase A (phospho-acceptor) domain RB10330 PF01627 Hpt domain RB10330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB10333 PF00069 Protein kinase domain RB10335 PF01255 Putative undecaprenyl diphosphate synthase RB10338 PF13414 TPR repeat RB10339 PF00140 Sigma-70 factor, region 1 RB10339 PF04539 Sigma-70 region 3 RB10339 PF04542 Sigma-70 region 2 RB10339 PF04545 Sigma-70, region 4 RB10346 PF13847 Methyltransferase domain RB10347 PF12867 DinB superfamily RB10350 PF04134 RB10350 RB10359 PF04452 RNA methyltransferase RB10367 PF00069 Protein kinase domain RB10367 PF13809 RB10367 RB10370 PF13419 Haloacid dehalogenase-like hydrolase RB10372 PF03176 MMPL family RB10374 PF01252 RB10374 RB10378 PF00085 Thioredoxin RB10380 PF07608 RB10380 RB10388 PF00069 Protein kinase domain RB1039 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RB1039 PF02403 Seryl-tRNA synthetase N-terminal domain RB10398 PF14535 AMP-binding enzyme C-terminal domain RB10401 PF02706 Chain length determinant protein RB10401 PF13614 AAA domain RB10404 PF02563 Polysaccharide biosynthesis/export protein RB10413 PF00082 Subtilase family RB10413 PF00404 Dockerin type I repeat RB10416 PF00331 Glycosyl hydrolase family 10 RB10416 PF00404 Dockerin type I repeat RB10416 PF03160 Calx-beta domain RB10416 PF07595 RB10416 RB10416 PF07691 PA14 domain RB10416 PF13385 Concanavalin A-like lectin/glucanases superfamily RB10420 PF16261 RB10420 RB10423 PF00404 Dockerin type I repeat RB10423 PF13385 Concanavalin A-like lectin/glucanases superfamily RB10428 PF01943 RB10428 RB10428 PF14667 Polysaccharide biosynthesis C-terminal domain RB10430 PF13469 Sulfotransferase family RB10431 PF13469 Sulfotransferase family RB10434 PF00534 Glycosyl transferases group 1 RB10436 PF00534 Glycosyl transferases group 1 RB10439 PF02397 RB10439 RB10439 PF13727 CoA-binding domain RB1044 PF01026 TatD related DNase RB10442 PF02310 B12 binding domain RB10442 PF04055 Radical SAM superfamily RB10442 PF13282 RB10442 RB10446 PF00109 Beta-ketoacyl synthase, N-terminal domain RB10446 PF00550 Phosphopantetheine attachment site RB10446 PF00698 Acyl transferase domain RB10446 PF02801 Beta-ketoacyl synthase, C-terminal domain RB10446 PF07993 Male sterility protein RB10446 PF08659 KR domain RB10446 PF14765 Polyketide synthase dehydratase RB10446 PF16197 RB10446 RB10451 PF00355 Rieske [2Fe-2S] domain RB10451 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RB10454 PF13561 Enoyl-(Acyl carrier protein) reductase RB10458 PF00076 RNA recognition motif RB10459 PF01593 Flavin containing amine oxidoreductase RB1046 PF00270 DEAD/DEAH box helicase RB1046 PF00271 Helicase conserved C-terminal domain RB1046 PF17191 RB1046 RB10463 PF00175 Oxidoreductase NAD-binding domain RB10465 PF00132 Bacterial transferase hexapeptide (six repeats) RB10465 PF00483 Nucleotidyl transferase RB10466 PF07977 FabA-like domain RB10468 PF01176 Translation initiation factor 1A / IF-1 RB10469 PF00380 Ribosomal protein S9/S16 RB10471 PF00572 Ribosomal protein L13 RB10473 PF16576 RB10473 RB10478 PF13437 HlyD family secretion protein RB10478 PF13533 Biotin-lipoyl like RB10483 PF11950 RB10483 RB10487 PF00270 DEAD/DEAH box helicase RB10487 PF00271 Helicase conserved C-terminal domain RB10487 PF00570 HRDC domain RB10487 PF09382 RQC domain RB10487 PF16124 RB10487 RB10488 PF00072 Response regulator receiver domain RB10488 PF00512 His Kinase A (phospho-acceptor) domain RB10488 PF01627 Hpt domain RB10488 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB10488 PF08448 PAS fold RB10491 PF00072 Response regulator receiver domain RB10491 PF13581 Histidine kinase-like ATPase domain RB10494 PF09861 Domain of unknown function (DUF2088) RB105 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB10500 PF00162 Phosphoglycerate kinase RB10503 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB10507 PF10566 Glycoside hydrolase 97 RB10507 PF14508 Glycosyl-hydrolase 97 N-terminal RB10507 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation RB10508 PF02464 Competence-damaged protein RB10510 PF02224 Cytidylate kinase RB10512 PF01841 Transglutaminase-like superfamily RB10512 PF11992 RB10512 RB10512 PF13559 RB10512 RB10515 PF01882 RB10515 RB10517 PF07726 ATPase family associated with various cellular activities (AAA) RB10519 PF02481 DNA recombination-mediator protein A RB10519 PF14520 Helix-hairpin-helix domain RB1052 PF07596 RB1052 RB1052 PF13633 Prokaryotic N-terminal methylation site RB10524 PF00575 S1 RNA binding domain RB10524 PF09371 Tex-like protein N-terminal domain RB10524 PF16921 RB10524 RB10531 PF07625 RB10531 RB10533 PF01189 NOL1/NOP2/sun family RB10533 PF13636 pre-rRNA processing and ribosome biogenesis RB10536 PF04026 SpoVG RB10537 PF08544 GHMP kinases C terminal RB10538 PF06230 Protein of unknown function (DUF1009) RB10539 PF00132 Bacterial transferase hexapeptide (six repeats) RB10539 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RB10541 PF13414 TPR repeat RB10541 PF13428 Tetratricopeptide repeat RB10541 PF13431 Tetratricopeptide repeat RB10547 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RB10547 PF03129 Anticodon binding domain RB10549 PF12850 Calcineurin-like phosphoesterase superfamily domain RB10553 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RB10554 PF00890 FAD binding domain RB10554 PF02910 Fumarate reductase flavoprotein C-term RB10555 PF13085 2Fe-2S iron-sulfur cluster binding domain RB10555 PF13183 4Fe-4S dicluster domain RB10558 PF01483 Proprotein convertase P-domain RB10558 PF13202 EF hand RB10560 PF03958 Bacterial type II/III secretion system short domain RB10566 PF02447 RB10566 RB10567 PF04376 RB10567 RB10567 PF04377 RB10567 RB10569 PF07596 RB10569 RB10569 PF13544 RB10569 RB10570 PF10067 RB10570 RB10581 PF07596 RB10581 RB10581 PF13633 Prokaryotic N-terminal methylation site RB10583 PF07593 RB10583 RB10583 PF13432 Tetratricopeptide repeat RB10583 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB10583 PF14559 Tetratricopeptide repeat RB10586 PF00557 Metallopeptidase family M24 RB10587 PF00149 Calcineurin-like phosphoesterase RB10590 PF01757 RB10590 RB10591 PF00365 Phosphofructokinase RB10592 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RB10592 PF00364 Biotin-requiring enzyme RB10592 PF00682 HMGL-like RB10592 PF02436 Conserved carboxylase domain RB10592 PF02785 Biotin carboxylase C-terminal domain RB10592 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RB10595 PF03200 Mannosyl oligosaccharide glucosidase RB10599 PF00884 Sulfatase RB10599 PF16347 RB10599 RB10612 PF00884 Sulfatase RB10614 PF00534 Glycosyl transferases group 1 RB10614 PF13439 Glycosyltransferase Family 4 RB10616 PF04295 RB10616 RB10616 PF08666 SAF domain RB10617 PF00549 CoA-ligase RB10617 PF08442 ATP-grasp domain RB10619 PF00549 CoA-ligase RB10619 PF02629 CoA binding domain RB10627 PF00166 Chaperonin 10 Kd subunit RB10629 PF00118 TCP-1/cpn60 chaperonin family RB1063 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB10631 PF00355 Rieske [2Fe-2S] domain RB10631 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RB10638 PF00318 Ribosomal protein S2 RB10640 PF00889 Elongation factor TS RB10641 PF00432 Prenyltransferase and squalene oxidase repeat RB10644 PF00460 Flagella basal body rod protein RB10644 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RB1065 PF00543 Nitrogen regulatory protein P-II RB10650 PF00291 Pyridoxal-phosphate dependent enzyme RB10652 PF00891 O-methyltransferase RB10653 PF00266 Aminotransferase class-V RB10654 PF01467 Cytidylyltransferase RB10655 PF02311 AraC-like ligand binding domain RB10655 PF12833 Helix-turn-helix domain RB10659 PF13514 AAA domain RB10663 PF00149 Calcineurin-like phosphoesterase RB10666 PF01345 RB10666 RB10666 PF07595 RB10666 RB10670 PF00884 Sulfatase RB10680 PF13692 Glycosyl transferases group 1 RB10683 PF01207 Dihydrouridine synthase (Dus) RB10686 PF05635 23S rRNA-intervening sequence protein RB10690 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase RB10693 PF01235 RB10693 RB107 PF13360 PQQ-like domain RB107 PF13570 PQQ-like domain RB10700 PF01618 RB10700 RB10702 PF02472 Biopolymer transport protein ExbD/TolR RB10704 PF02472 Biopolymer transport protein ExbD/TolR RB10706 PF13360 PQQ-like domain RB10709 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RB10711 PF00533 BRCA1 C Terminus (BRCT) domain RB10711 PF01653 NAD-dependent DNA ligase adenylation domain RB10711 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RB10711 PF03120 NAD-dependent DNA ligase OB-fold domain RB10711 PF12826 Helix-hairpin-helix motif RB10716 PF13360 PQQ-like domain RB10716 PF13570 PQQ-like domain RB10721 PF00924 Mechanosensitive ion channel RB10721 PF12794 RB10721 RB10727 PF05067 Manganese containing catalase RB10730 PF07623 RB10730 RB10733 PF00107 Zinc-binding dehydrogenase RB10733 PF08240 Alcohol dehydrogenase GroES-like domain RB10733 PF13823 Alcohol dehydrogenase GroES-associated RB10734 PF13365 Trypsin-like peptidase domain RB1074 PF02653 RB1074 RB10767 PF01420 Type I restriction modification DNA specificity domain RB10768 PF02384 N-6 DNA Methylase RB10768 PF12161 HsdM N-terminal domain RB10770 PF00271 Helicase conserved C-terminal domain RB10770 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RB10770 PF04851 Type III restriction enzyme, res subunit RB10770 PF08463 RB10770 RB10770 PF13643 RB10770 RB10780 PF07618 RB10780 RB10785 PF00589 Phage integrase family RB10787 PF05161 MOFRL family RB10787 PF13660 Domain of unknown function (DUF4147) RB10789 PF08534 Redoxin RB1079 PF00406 Adenylate kinase RB10790 PF13561 Enoyl-(Acyl carrier protein) reductase RB10793 PF00158 Sigma-54 interaction domain RB10793 PF01590 GAF domain RB10793 PF02954 Bacterial regulatory protein, Fis family RB10797 PF02230 Phospholipase/Carboxylesterase RB10799 PF07584 RB10799 RB10801 PF07090 Protein of unknown function (DUF1355) RB10801 PF13519 von Willebrand factor type A domain RB10805 PF00465 Iron-containing alcohol dehydrogenase RB1081 PF01048 Phosphorylase superfamily RB10814 PF07643 RB10814 RB10816 PF13177 DNA polymerase III, delta subunit RB10817 PF02502 Ribose/Galactose Isomerase RB10818 PF01300 Telomere recombination RB10818 PF01451 Low molecular weight phosphotyrosine protein phosphatase RB10820 PF01436 NHL repeat RB10820 PF08450 SMP-30/Gluconolaconase/LRE-like region RB10823 PF13472 GDSL-like Lipase/Acylhydrolase family RB10826 PF00574 Clp protease RB10829 PF00574 Clp protease RB10834 PF00206 Lyase RB10834 PF14698 Argininosuccinate lyase C-terminal RB10839 PF13360 PQQ-like domain RB10841 PF13480 Acetyltransferase (GNAT) domain RB10844 PF00583 Acetyltransferase (GNAT) family RB10852 PF02637 GatB domain RB10852 PF02934 GatB/GatE catalytic domain RB10853 PF12146 Putative lysophospholipase RB10855 PF13378 Enolase C-terminal domain-like RB10858 PF01370 NAD dependent epimerase/dehydratase family RB10877 PF02517 CAAX protease self-immunity RB10878 PF01066 CDP-alcohol phosphatidyltransferase RB10880 PF00919 Uncharacterized protein family UPF0004 RB10880 PF04055 Radical SAM superfamily RB10883 PF00152 tRNA synthetases class II (D, K and N) RB10883 PF01336 OB-fold nucleic acid binding domain RB10887 PF02543 Carbamoyltransferase RB10887 PF16861 RB10887 RB10892 PF00512 His Kinase A (phospho-acceptor) domain RB10892 PF00909 Ammonium Transporter Family RB10892 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB10894 PF00291 Pyridoxal-phosphate dependent enzyme RB10898 PF13407 Periplasmic binding protein domain RB10905 PF12850 Calcineurin-like phosphoesterase superfamily domain RB10907 PF12850 Calcineurin-like phosphoesterase superfamily domain RB10909 PF00814 Glycoprotease family RB10911 PF01103 Surface antigen RB10916 PF07244 Surface antigen variable number repeat RB1092 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RB1092 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RB10921 PF09370 TIM-barrel signal transduction protein RB10922 PF06792 Uncharacterised protein family (UPF0261) RB10924 PF00072 Response regulator receiver domain RB10924 PF00512 His Kinase A (phospho-acceptor) domain RB10924 PF00989 PAS fold RB10924 PF01339 CheB methylesterase RB10924 PF01739 CheR methyltransferase, SAM binding domain RB10924 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB10924 PF03705 CheR methyltransferase, all-alpha domain RB10924 PF08447 PAS fold RB10924 PF08448 PAS fold RB10924 PF13596 PAS domain RB10934 PF05532 CsbD-like RB10939 PF07883 Cupin domain RB10940 PF13673 Acetyltransferase (GNAT) domain RB10942 PF13432 Tetratricopeptide repeat RB10957 PF07498 Rho termination factor, N-terminal domain RB10960 PF07681 RB10960 RB10966 PF01679 RB10966 RB10967 PF00107 Zinc-binding dehydrogenase RB10967 PF16884 RB10967 RB10968 PF00171 Aldehyde dehydrogenase family RB10971 PF00106 short chain dehydrogenase RB10978 PF00893 Small Multidrug Resistance protein RB10979 PF07606 Protein of unknown function (DUF1569) RB10981 PF13437 HlyD family secretion protein RB10984 PF00873 AcrB/AcrD/AcrF family RB10985 PF01966 HD domain RB10987 PF02567 Phenazine biosynthesis-like protein RB10989 PF13673 Acetyltransferase (GNAT) domain RB10991 PF01047 MarR family RB10993 PF04542 Sigma-70 region 2 RB10993 PF08281 Sigma-70, region 4 RB10995 PF00069 Protein kinase domain RB10996 PF03033 Glycosyltransferase family 28 N-terminal domain RB10999 PF13088 BNR repeat-like domain RB10999 PF13385 Concanavalin A-like lectin/glucanases superfamily RB110 PF00884 Sulfatase RB110 PF16347 RB110 RB1100 PF14102 RB1100 RB11000 PF16316 RB11000 RB11001 PF09359 VTC domain RB11003 PF08757 RB11003 RB11009 PF00258 Flavodoxin RB11010 PF10670 RB11010 RB11011 PF10029 RB11011 RB11013 PF16357 RB11013 RB11015 PF07596 RB11015 RB11015 PF13633 Prokaryotic N-terminal methylation site RB11016 PF07596 RB11016 RB11016 PF13633 Prokaryotic N-terminal methylation site RB11021 PF00005 ABC transporter RB11024 PF00756 Putative esterase RB11024 PF11806 Domain of unknown function (DUF3327) RB11027 PF02687 RB11027 RB11027 PF12704 MacB-like periplasmic core domain RB1103 PF08245 Mur ligase middle domain RB11030 PF00005 ABC transporter RB11033 PF02687 RB11033 RB11033 PF12704 MacB-like periplasmic core domain RB11036 PF00072 Response regulator receiver domain RB11036 PF00158 Sigma-54 interaction domain RB11036 PF02954 Bacterial regulatory protein, Fis family RB11037 PF00672 HAMP domain RB11037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB11041 PF07596 RB11041 RB11041 PF13633 Prokaryotic N-terminal methylation site RB11047 PF03976 Polyphosphate kinase 2 (PPK2) RB11050 PF02690 RB11050 RB11055 PF01156 Inosine-uridine preferring nucleoside hydrolase RB11055 PF13088 BNR repeat-like domain RB11062 PF11322 RB11062 RB11063 PF00484 Carbonic anhydrase RB11063 PF00916 RB11063 RB11069 PF00999 Sodium/hydrogen exchanger family RB11069 PF02080 TrkA-C domain RB1107 PF07636 RB1107 RB11072 PF00873 AcrB/AcrD/AcrF family RB11073 PF13533 Biotin-lipoyl like RB11073 PF16576 RB11073 RB11075 PF01047 MarR family RB11077 PF02082 Transcriptional regulator RB11084 PF13435 Cytochrome c554 and c-prime RB11088 PF07593 RB11088 RB11088 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB1109 PF06439 Domain of Unknown Function (DUF1080) RB11090 PF00072 Response regulator receiver domain RB11091 PF00512 His Kinase A (phospho-acceptor) domain RB11091 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB11091 PF08448 PAS fold RB11091 PF13426 PAS domain RB11099 PF06738 RB11099 RB11099 PF12821 RB11099 RB11100 PF01325 Iron dependent repressor, N-terminal DNA binding domain RB11100 PF02742 Iron dependent repressor, metal binding and dimerisation domain RB11101 PF07596 RB11101 RB11101 PF13633 Prokaryotic N-terminal methylation site RB11105 PF03372 Endonuclease/Exonuclease/phosphatase family RB11107 PF13628 RB11107 RB11110 PF07592 RB11110 RB11112 PF01588 Putative tRNA binding domain RB11116 PF00884 Sulfatase RB11118 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RB11118 PF13378 Enolase C-terminal domain-like RB11119 PF00877 NlpC/P60 family RB11121 PF07606 Protein of unknown function (DUF1569) RB11122 PF07625 RB11122 RB11123 PF00884 Sulfatase RB11127 PF00884 Sulfatase RB11127 PF16347 RB11127 RB11131 PF00404 Dockerin type I repeat RB11131 PF03098 Animal haem peroxidase RB11133 PF00404 Dockerin type I repeat RB11133 PF00413 Matrixin RB11133 PF07595 RB11133 RB11135 PF04542 Sigma-70 region 2 RB11135 PF08281 Sigma-70, region 4 RB11136 PF00069 Protein kinase domain RB11136 PF13181 Tetratricopeptide repeat RB11136 PF13374 Tetratricopeptide repeat RB11142 PF13360 PQQ-like domain RB11146 PF01738 Dienelactone hydrolase family RB11150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RB11151 PF00107 Zinc-binding dehydrogenase RB11151 PF08240 Alcohol dehydrogenase GroES-like domain RB11152 PF00873 AcrB/AcrD/AcrF family RB11154 PF13437 HlyD family secretion protein RB11155 PF02321 Outer membrane efflux protein RB11157 PF03960 ArsC family RB11160 PF13460 NADH(P)-binding RB11162 PF08305 NPCBM/NEW2 domain RB11165 PF02335 Cytochrome c552 RB11167 PF03264 NapC/NirT cytochrome c family, N-terminal region RB11168 PF00581 Rhodanese-like domain RB11171 PF06445 GyrI-like small molecule binding domain RB11171 PF13411 MerR HTH family regulatory protein RB11173 PF13380 CoA binding domain RB11174 PF00581 Rhodanese-like domain RB11174 PF00753 Metallo-beta-lactamase superfamily RB11176 PF04273 Putative phosphatase (DUF442) RB11179 PF00582 Universal stress protein family RB1118 PF04940 Sensors of blue-light using FAD RB11181 PF07625 RB11181 RB11183 PF00582 Universal stress protein family RB11185 PF00582 Universal stress protein family RB11186 PF00072 Response regulator receiver domain RB11186 PF00158 Sigma-54 interaction domain RB11186 PF02954 Bacterial regulatory protein, Fis family RB11191 PF00072 Response regulator receiver domain RB11191 PF00989 PAS fold RB11191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB11194 PF03831 PhnA protein RB11194 PF08274 PhnA Zinc-Ribbon RB1120 PF02321 Outer membrane efflux protein RB11201 PF00072 Response regulator receiver domain RB11203 PF00512 His Kinase A (phospho-acceptor) domain RB11203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB11203 PF08447 PAS fold RB11205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RB11205 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB11207 PF04784 RB11207 RB11207 PF09335 RB11207 RB11211 PF13527 Acetyltransferase (GNAT) domain RB11216 PF00037 4Fe-4S binding domain RB11217 PF03747 ADP-ribosylglycohydrolase RB11219 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family RB1122 PF13437 HlyD family secretion protein RB11223 PF12840 Helix-turn-helix domain RB11225 PF00581 Rhodanese-like domain RB11225 PF11127 Protein of unknown function (DUF2892) RB11226 PF01925 RB11226 RB11227 PF00581 Rhodanese-like domain RB11227 PF00753 Metallo-beta-lactamase superfamily RB11230 PF00210 Ferritin-like domain RB11231 PF02635 DsrE/DsrF-like family RB11238 PF16576 RB11238 RB11240 PF00873 AcrB/AcrD/AcrF family RB11242 PF04542 Sigma-70 region 2 RB11244 PF00069 Protein kinase domain RB11247 PF13304 AAA domain RB11248 PF04191 Phospholipid methyltransferase RB11249 PF13472 GDSL-like Lipase/Acylhydrolase family RB1125 PF00005 ABC transporter RB1125 PF00664 ABC transporter transmembrane region RB11252 PF00067 Cytochrome P450 RB11253 PF01066 CDP-alcohol phosphatidyltransferase RB11255 PF01148 Cytidylyltransferase family RB11258 PF09335 RB11258 RB11260 PF01258 Prokaryotic dksA/traR C4-type zinc finger RB11262 PF00781 Diacylglycerol kinase catalytic domain RB11266 PF00149 Calcineurin-like phosphoesterase RB11269 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB11273 PF07690 Major Facilitator Superfamily RB11276 PF07583 RB11276 RB11276 PF07587 RB11276 RB11276 PF07635 RB11276 RB11279 PF07394 RB11279 RB11286 PF03073 TspO/MBR family RB11288 PF10020 RB11288 RB1129 PF10070 RB1129 RB11291 PF07883 Cupin domain RB11294 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RB11303 PF03050 RB11303 RB11313 PF01726 LexA DNA binding domain RB11313 PF07929 Plasmid pRiA4b ORF-3-like protein RB11319 PF13191 AAA ATPase domain RB11319 PF13271 RB11319 RB11321 PF00293 NUDIX domain RB11321 PF00931 NB-ARC domain RB11321 PF13181 Tetratricopeptide repeat RB11321 PF13432 Tetratricopeptide repeat RB11321 PF13676 TIR domain RB11328 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RB11328 PF03466 LysR substrate binding domain RB11331 PF02254 TrkA-N domain RB11334 PF00069 Protein kinase domain RB11334 PF13271 RB11334 RB11337 PF01609 Transposase DDE domain RB11337 PF13340 RB11337 RB1134 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RB1134 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RB11352 PF04055 Radical SAM superfamily RB11352 PF13353 4Fe-4S single cluster domain RB11356 PF00535 Glycosyl transferase family 2 RB11363 PF06114 Domain of unknown function (DUF955) RB11366 PF01381 Helix-turn-helix RB11370 PF13560 Helix-turn-helix domain RB11371 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RB11371 PF04851 Type III restriction enzyme, res subunit RB11371 PF11867 RB11371 RB11377 PF01420 Type I restriction modification DNA specificity domain RB11379 PF02384 N-6 DNA Methylase RB11379 PF12161 HsdM N-terminal domain RB1138 PF12802 MarR family RB11383 PF04545 Sigma-70, region 4 RB11392 PF13470 RB11392 RB11393 PF05534 RB11393 RB11395 PF03073 TspO/MBR family RB11397 PF04832 SOUL heme-binding protein RB11399 PF04134 RB11399 RB1140 PF00072 Response regulator receiver domain RB1140 PF00196 Bacterial regulatory proteins, luxR family RB11401 PF00271 Helicase conserved C-terminal domain RB11401 PF04851 Type III restriction enzyme, res subunit RB11401 PF11907 RB11401 RB11401 PF13091 PLD-like domain RB11405 PF13395 HNH endonuclease RB11407 PF00271 Helicase conserved C-terminal domain RB11407 PF04851 Type III restriction enzyme, res subunit RB11408 PF08463 RB11408 RB11411 PF02384 N-6 DNA Methylase RB11411 PF12161 HsdM N-terminal domain RB11412 PF01420 Type I restriction modification DNA specificity domain RB11415 PF13304 AAA domain RB11419 PF04493 Endonuclease V RB11420 PF00149 Calcineurin-like phosphoesterase RB11421 PF05731 TROVE domain RB11438 PF02810 SEC-C motif RB11461 PF07606 Protein of unknown function (DUF1569) RB11462 PF13380 CoA binding domain RB11463 PF13360 PQQ-like domain RB11463 PF13570 PQQ-like domain RB1147 PF00437 Type II/IV secretion system protein RB11470 PF01161 Phosphatidylethanolamine-binding protein RB11470 PF14240 RB11470 RB11473 PF04542 Sigma-70 region 2 RB11473 PF08281 Sigma-70, region 4 RB11476 PF13527 Acetyltransferase (GNAT) domain RB1148 PF00482 Type II secretion system (T2SS), protein F RB11480 PF12802 MarR family RB11482 PF00753 Metallo-beta-lactamase superfamily RB11482 PF14863 Alkyl sulfatase dimerisation RB11485 PF03795 YCII-related domain RB11487 PF07681 RB11487 RB11488 PF13561 Enoyl-(Acyl carrier protein) reductase RB11489 PF04954 Siderophore-interacting protein RB11489 PF08021 Siderophore-interacting FAD-binding domain RB1149 PF00482 Type II secretion system (T2SS), protein F RB11490 PF14358 RB11490 RB11494 PF13460 NADH(P)-binding RB11497 PF10017 RB11497 RB11498 PF03781 Sulfatase-modifying factor enzyme 1 RB11498 PF12867 DinB superfamily RB115 PF07596 RB115 RB115 PF13633 Prokaryotic N-terminal methylation site RB11502 PF00753 Metallo-beta-lactamase superfamily RB11502 PF14863 Alkyl sulfatase dimerisation RB11504 PF12464 Maltose acetyltransferase RB11505 PF08547 Complex I intermediate-associated protein 30 (CIA30) RB11506 PF01361 Tautomerase enzyme RB11509 PF08818 Domain of unknown function (DU1801) RB11510 PF01588 Putative tRNA binding domain RB11510 PF08922 Domain of unknown function (DUF1905) RB11510 PF13376 RB11510 RB11512 PF02567 Phenazine biosynthesis-like protein RB11515 PF10985 RB11515 RB11516 PF01966 HD domain RB11518 PF08713 DNA alkylation repair enzyme RB11524 PF04055 Radical SAM superfamily RB11524 PF13353 4Fe-4S single cluster domain RB11527 PF00535 Glycosyl transferase family 2 RB11529 PF00535 Glycosyl transferase family 2 RB1153 PF07811 RB1153 RB11533 PF00685 Sulfotransferase domain RB11533 PF01755 RB11533 RB1154 PF07811 RB1154 RB11550 PF00881 Nitroreductase family RB1156 PF13400 RB1156 RB11563 PF00005 ABC transporter RB11564 PF12698 ABC-2 family transporter protein RB11579 PF00308 Bacterial dnaA protein RB11579 PF07728 AAA domain (dynein-related subfamily) RB11579 PF08299 Bacterial dnaA protein helix-turn-helix RB11582 PF00266 Aminotransferase class-V RB11587 PF04079 Putative transcriptional regulators (Ypuh-like) RB11594 PF00072 Response regulator receiver domain RB11595 PF00437 Type II/IV secretion system protein RB11595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RB11597 PF00482 Type II secretion system (T2SS), protein F RB11604 PF00512 His Kinase A (phospho-acceptor) domain RB11604 PF00672 HAMP domain RB11604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB11607 PF03983 SLA1 homology domain 1, SHD1 RB1161 PF00432 Prenyltransferase and squalene oxidase repeat RB11615 PF00589 Phage integrase family RB11617 PF14267 RB11617 RB11618 PF02384 N-6 DNA Methylase RB11618 PF12161 HsdM N-terminal domain RB11619 PF01420 Type I restriction modification DNA specificity domain RB11622 PF00271 Helicase conserved C-terminal domain RB11622 PF04851 Type III restriction enzyme, res subunit RB11622 PF08463 RB11622 RB11622 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) RB11622 PF13643 RB11622 RB11624 PF14082 RB11624 RB11626 PF02810 SEC-C motif RB11631 PF12728 Helix-turn-helix domain RB11633 PF07618 RB11633 RB1164 PF02472 Biopolymer transport protein ExbD/TolR RB11641 PF14267 RB11641 RB11642 PF02384 N-6 DNA Methylase RB11642 PF12161 HsdM N-terminal domain RB11643 PF01420 Type I restriction modification DNA specificity domain RB1165 PF01618 RB1165 RB11650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB11654 PF00246 Zinc carboxypeptidase RB11660 PF13360 PQQ-like domain RB11663 PF07690 Major Facilitator Superfamily RB11668 PF00512 His Kinase A (phospho-acceptor) domain RB11668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB11669 PF00072 Response regulator receiver domain RB11669 PF00158 Sigma-54 interaction domain RB11669 PF02954 Bacterial regulatory protein, Fis family RB11670 PF00756 Putative esterase RB11673 PF00009 Elongation factor Tu GTP binding domain RB11673 PF00679 Elongation factor G C-terminus RB11673 PF06421 GTP-binding protein LepA C-terminus RB1168 PF13174 Tetratricopeptide repeat RB1168 PF13432 Tetratricopeptide repeat RB11688 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RB11690 PF01043 SecA preprotein cross-linking domain RB11690 PF02810 SEC-C motif RB11690 PF07516 SecA Wing and Scaffold domain RB11690 PF07517 SecA DEAD-like domain RB11693 PF01784 NIF3 (NGG1p interacting factor 3) RB1170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RB11706 PF13180 PDZ domain RB11706 PF13365 Trypsin-like peptidase domain RB11712 PF00176 SNF2 family N-terminal domain RB11712 PF00271 Helicase conserved C-terminal domain RB11728 PF01261 Xylose isomerase-like TIM barrel RB11730 PF05742 RB11730 RB11736 PF07596 RB11736 RB11736 PF13633 Prokaryotic N-terminal methylation site RB11742 PF07583 RB11742 RB11742 PF07587 RB11742 RB11742 PF07635 RB11742 RB11746 PF07394 RB11746 RB11749 PF01527 Transposase RB11750 PF00665 Integrase core domain RB11750 PF13276 RB11750 RB11756 PF13649 Methyltransferase domain RB11762 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB11769 PF00028 Cadherin domain RB11769 PF03160 Calx-beta domain RB1179 PF07623 RB1179 RB11799 PF01457 Leishmanolysin RB11799 PF07589 RB11799 RB1180 PF07623 RB1180 RB11802 PF01527 Transposase RB11803 PF00665 Integrase core domain RB11803 PF13276 RB11803 RB11807 PF07589 RB11807 RB11811 PF03781 Sulfatase-modifying factor enzyme 1 RB11812 PF07621 RB11812 RB11817 PF01580 FtsK/SpoIIIE family RB11817 PF09397 Ftsk gamma domain RB11817 PF13491 RB11817 RB11822 PF00478 IMP dehydrogenase / GMP reductase domain RB11822 PF00571 CBS domain RB11832 PF00334 Nucleoside diphosphate kinase RB11839 PF01643 Acyl-ACP thioesterase RB1184 PF07590 RB1184 RB11843 PF07628 RB11843 RB11845 PF07628 RB11845 RB11847 PF01625 Peptide methionine sulfoxide reductase RB11848 PF07621 RB11848 RB11848 PF07623 RB11848 RB1185 PF04986 RB1185 RB11851 PF00482 Type II secretion system (T2SS), protein F RB11853 PF01227 GTP cyclohydrolase I RB11854 PF07628 RB11854 RB11855 PF07628 RB11855 RB11856 PF00474 Sodium:solute symporter family RB11857 PF04341 RB11857 RB11859 PF12706 Beta-lactamase superfamily domain RB11863 PF00154 recA bacterial DNA recombination protein RB11870 PF08668 HDOD domain RB11875 PF01636 Phosphotransferase enzyme family RB11876 PF02683 RB11876 RB11876 PF11412 Disulphide bond corrector protein DsbC RB11876 PF13899 Thioredoxin-like RB11877 PF01926 50S ribosome-binding GTPase RB11877 PF10396 GTP-binding protein TrmE N-terminus RB11877 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE RB11878 PF01625 Peptide methionine sulfoxide reductase RB11879 PF13180 PDZ domain RB11879 PF13365 Trypsin-like peptidase domain RB11882 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RB11884 PF07586 RB11884 RB11886 PF07624 RB11886 RB11886 PF07626 RB11886 RB11886 PF07627 RB11886 RB11886 PF07631 RB11886 RB11886 PF07635 RB11886 RB11886 PF07637 RB11886 RB1189 PF01527 Transposase RB11898 PF06305 RB11898 RB1190 PF00665 Integrase core domain RB1190 PF13276 RB1190 RB11906 PF13673 Acetyltransferase (GNAT) domain RB11907 PF13883 Pyridoxamine 5'-phosphate oxidase RB1191 PF14319 RB1191 RB11913 PF07726 ATPase family associated with various cellular activities (AAA) RB11914 PF01882 RB11914 RB11916 PF01841 Transglutaminase-like superfamily RB11918 PF06155 Protein of unknown function (DUF971) RB11919 PF00920 Dehydratase family RB1192 PF00589 Phage integrase family RB1192 PF13495 Phage integrase, N-terminal SAM-like domain RB11920 PF04298 RB11920 RB11922 PF04238 RB11922 RB11923 PF02630 SCO1/SenC RB11927 PF07859 alpha/beta hydrolase fold RB11928 PF10979 RB11928 RB11929 PF01061 RB11929 RB11930 PF00005 ABC transporter RB11931 PF01040 UbiA prenyltransferase family RB11934 PF02628 RB11934 RB11937 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB11941 PF00535 Glycosyl transferase family 2 RB11942 PF01553 Acyltransferase RB11943 PF01593 Flavin containing amine oxidoreductase RB11945 PF00171 Aldehyde dehydrogenase family RB11946 PF00881 Nitroreductase family RB11947 PF00158 Sigma-54 interaction domain RB11947 PF02954 Bacterial regulatory protein, Fis family RB11948 PF12831 FAD dependent oxidoreductase RB11955 PF00069 Protein kinase domain RB11958 PF02621 Menaquinone biosynthesis RB11959 PF01113 Dihydrodipicolinate reductase, N-terminus RB11959 PF05173 Dihydrodipicolinate reductase, C-terminus RB1196 PF00583 Acetyltransferase (GNAT) family RB11961 PF12836 Helix-hairpin-helix motif RB11964 PF01883 Domain of unknown function DUF59 RB11967 PF03061 Thioesterase superfamily RB11969 PF02655 ATP-grasp domain RB11975 PF00107 Zinc-binding dehydrogenase RB11975 PF00109 Beta-ketoacyl synthase, N-terminal domain RB11975 PF00550 Phosphopantetheine attachment site RB11975 PF00698 Acyl transferase domain RB11975 PF00975 Thioesterase domain RB11975 PF02801 Beta-ketoacyl synthase, C-terminal domain RB11975 PF08240 Alcohol dehydrogenase GroES-like domain RB11975 PF08659 KR domain RB11975 PF14765 Polyketide synthase dehydratase RB11975 PF16197 RB11975 RB11976 PF00072 Response regulator receiver domain RB11976 PF00486 Transcriptional regulatory protein, C terminal RB11978 PF00756 Putative esterase RB11978 PF08450 SMP-30/Gluconolaconase/LRE-like region RB11981 PF01497 Periplasmic binding protein RB11983 PF01502 Phosphoribosyl-AMP cyclohydrolase RB11985 PF00107 Zinc-binding dehydrogenase RB11985 PF08240 Alcohol dehydrogenase GroES-like domain RB11986 PF00072 Response regulator receiver domain RB11986 PF00512 His Kinase A (phospho-acceptor) domain RB11986 PF00989 PAS fold RB11986 PF01627 Hpt domain RB11986 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB11986 PF08448 PAS fold RB11988 PF00069 Protein kinase domain RB11990 PF07638 ECF sigma factor RB11991 PF00850 Histone deacetylase domain RB11994 PF05448 Acetyl xylan esterase (AXE1) RB11998 PF03781 Sulfatase-modifying factor enzyme 1 RB12002 PF04029 2-phosphosulpholactate phosphatase RB12005 PF14255 RB12005 RB12006 PF13516 Leucine Rich repeat RB12007 PF00875 DNA photolyase RB12007 PF03441 FAD binding domain of DNA photolyase RB12012 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RB12012 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RB12013 PF00696 Amino acid kinase family RB12013 PF01472 PUA domain RB12019 PF00248 Aldo/keto reductase family RB1202 PF13936 Helix-turn-helix domain RB12022 PF07586 RB12022 RB12024 PF07624 RB12024 RB12024 PF07626 RB12024 RB12024 PF07627 RB12024 RB12024 PF07631 RB12024 RB12024 PF07637 RB12024 RB12035 PF01261 Xylose isomerase-like TIM barrel RB12038 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB12038 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RB12039 PF01565 FAD binding domain RB12039 PF02913 FAD linked oxidases, C-terminal domain RB1204 PF07621 RB1204 RB12040 PF01565 FAD binding domain RB12042 PF02754 RB12042 RB12042 PF13183 4Fe-4S dicluster domain RB12047 PF00270 DEAD/DEAH box helicase RB12047 PF00271 Helicase conserved C-terminal domain RB1205 PF00884 Sulfatase RB12053 PF02472 Biopolymer transport protein ExbD/TolR RB12055 PF01618 RB12055 RB12056 PF13174 Tetratricopeptide repeat RB12056 PF13432 Tetratricopeptide repeat RB12056 PF13525 Outer membrane lipoprotein RB12060 PF08899 RB12060 RB12061 PF00117 Glutamine amidotransferase class-I RB12061 PF06418 CTP synthase N-terminus RB12068 PF13360 PQQ-like domain RB12068 PF13570 PQQ-like domain RB12073 PF01261 Xylose isomerase-like TIM barrel RB1208 PF07589 RB1208 RB12080 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RB12081 PF01966 HD domain RB12081 PF02541 Ppx/GppA phosphatase family RB12082 PF13419 Haloacid dehalogenase-like hydrolase RB12084 PF06439 Domain of Unknown Function (DUF1080) RB12087 PF00920 Dehydratase family RB12089 PF00884 Sulfatase RB12092 PF00884 Sulfatase RB12097 PF07583 RB12097 RB12097 PF07587 RB12097 RB12097 PF07635 RB12097 RB1210 PF01261 Xylose isomerase-like TIM barrel RB12102 PF07394 RB12102 RB12107 PF00883 Cytosol aminopeptidase family, catalytic domain RB12107 PF02789 Cytosol aminopeptidase family, N-terminal domain RB12108 PF00072 Response regulator receiver domain RB12108 PF00158 Sigma-54 interaction domain RB12108 PF02954 Bacterial regulatory protein, Fis family RB12112 PF03983 SLA1 homology domain 1, SHD1 RB12113 PF02142 MGS-like domain RB12113 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RB12113 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RB12116 PF00533 BRCA1 C Terminus (BRCT) domain RB12116 PF00929 Exonuclease RB12118 PF07394 RB12118 RB1212 PF00571 CBS domain RB1212 PF01769 Divalent cation transporter RB1212 PF03448 MgtE intracellular N domain RB12124 PF07583 RB12124 RB12124 PF07587 RB12124 RB12124 PF07635 RB12124 RB12129 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RB12129 PF02824 TGS domain RB12129 PF03129 Anticodon binding domain RB12129 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RB1213 PF01132 Elongation factor P (EF-P) OB domain RB1213 PF08207 Elongation factor P (EF-P) KOW-like domain RB1213 PF09285 Elongation factor P, C-terminal RB12133 PF01546 Peptidase family M20/M25/M40 RB12133 PF07687 Peptidase dimerisation domain RB12137 PF02617 ATP-dependent Clp protease adaptor protein ClpS RB12138 PF00919 Uncharacterized protein family UPF0004 RB12138 PF04055 Radical SAM superfamily RB12139 PF12643 RB12139 RB1214 PF04055 Radical SAM superfamily RB1214 PF13394 4Fe-4S single cluster domain RB12144 PF07628 RB12144 RB12145 PF00899 ThiF family RB12148 PF00595 PDZ domain (Also known as DHR or GLGF) RB12148 PF03572 Peptidase family S41 RB12148 PF11818 RB12148 RB12151 PF06094 AIG2-like family RB12155 PF07583 RB12155 RB12155 PF07587 RB12155 RB12155 PF07635 RB12155 RB12159 PF07394 RB12159 RB1216 PF12698 ABC-2 family transporter protein RB12160 PF00085 Thioredoxin RB12164 PF00293 NUDIX domain RB12172 PF10135 RB12172 RB12174 PF02119 RB12174 RB12175 PF02107 RB12175 RB12178 PF13144 SAF-like RB12180 PF00460 Flagella basal body rod protein RB12180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RB12181 PF00460 Flagella basal body rod protein RB12181 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RB12183 PF00990 GGDEF domain RB12189 PF04972 BON domain RB12191 PF00733 Asparagine synthase RB12194 PF01259 SAICAR synthetase RB12197 PF00707 Translation initiation factor IF-3, C-terminal domain RB12197 PF05198 Translation initiation factor IF-3, N-terminal domain RB1220 PF01263 Aldose 1-epimerase RB12202 PF00589 Phage integrase family RB12205 PF01381 Helix-turn-helix RB12209 PF13730 RB12209 RB12211 PF03796 DnaB-like helicase C terminal domain RB12227 PF13564 RB12227 RB12229 PF07617 RB12229 RB12236 PF03703 RB12236 RB12238 PF04972 BON domain RB12239 PF13546 RB12239 RB12241 PF14592 Chondroitinase B RB1225 PF00326 Prolyl oligopeptidase family RB1225 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region RB12250 PF10985 RB12250 RB12251 PF04542 Sigma-70 region 2 RB12251 PF08281 Sigma-70, region 4 RB12256 PF01569 PAP2 superfamily RB12262 PF00042 Globin RB12262 PF00175 Oxidoreductase NAD-binding domain RB12262 PF00970 Oxidoreductase FAD-binding domain RB12265 PF07640 RB12265 RB12267 PF12088 RB12267 RB12279 PF00924 Mechanosensitive ion channel RB12282 PF01594 RB12282 RB12285 PF00398 Ribosomal RNA adenine dimethylase RB12290 PF02233 NAD(P) transhydrogenase beta subunit RB12291 PF12769 Domain of unknown function (DUF3814) RB12292 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RB12292 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RB12296 PF00106 short chain dehydrogenase RB123 PF00482 Type II secretion system (T2SS), protein F RB12301 PF05239 PRC-barrel domain RB12303 PF11721 Di-glucose binding within endoplasmic reticulum RB12303 PF13360 PQQ-like domain RB12305 PF11721 Di-glucose binding within endoplasmic reticulum RB1231 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RB1231 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB12310 PF00069 Protein kinase domain RB12313 PF07638 ECF sigma factor RB12315 PF00132 Bacterial transferase hexapeptide (six repeats) RB12315 PF12464 Maltose acetyltransferase RB12316 PF01522 Polysaccharide deacetylase RB12325 PF00884 Sulfatase RB12325 PF16385 RB12325 RB12326 PF00072 Response regulator receiver domain RB12326 PF00512 His Kinase A (phospho-acceptor) domain RB12326 PF01590 GAF domain RB12326 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB12326 PF08448 PAS fold RB12327 PF00854 POT family RB1233 PF00163 Ribosomal protein S4/S9 N-terminal domain RB1233 PF01479 S4 domain RB12334 PF02163 Peptidase family M50 RB12337 PF00326 Prolyl oligopeptidase family RB12337 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RB12342 PF01618 RB12342 RB12343 PF00128 Alpha amylase, catalytic domain RB12343 PF11941 Domain of unknown function (DUF3459) RB12344 PF00534 Glycosyl transferases group 1 RB12347 PF13242 HAD-hyrolase-like RB12348 PF04186 RB12348 RB1235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB12351 PF00034 Cytochrome c RB12351 PF13472 GDSL-like Lipase/Acylhydrolase family RB12357 PF01052 Surface presentation of antigens (SPOA) RB12360 PF00251 Glycosyl hydrolases family 32 N-terminal domain RB12361 PF00294 pfkB family carbohydrate kinase RB12362 PF00578 AhpC/TSA family RB12363 PF00580 UvrD/REP helicase N-terminal domain RB12363 PF13361 UvrD-like helicase C-terminal domain RB12372 PF04542 Sigma-70 region 2 RB12372 PF08281 Sigma-70, region 4 RB12377 PF00398 Ribosomal RNA adenine dimethylase RB12379 PF00677 Lumazine binding domain RB12381 PF00113 Enolase, C-terminal TIM barrel domain RB12381 PF03952 Enolase, N-terminal domain RB12383 PF03966 Trm112p-like protein RB12388 PF13546 RB12388 RB12393 PF13435 Cytochrome c554 and c-prime RB1240 PF06439 Domain of Unknown Function (DUF1080) RB12400 PF01694 Rhomboid family RB12406 PF03825 RB12406 RB12409 PF07090 Protein of unknown function (DUF1355) RB12409 PF13519 von Willebrand factor type A domain RB12409 PF13768 von Willebrand factor type A domain RB12415 PF04892 RB12415 RB12419 PF14437 RB12419 RB12421 PF13516 Leucine Rich repeat RB12422 PF12867 DinB superfamily RB12424 PF00520 Ion transport protein RB12428 PF13432 Tetratricopeptide repeat RB12431 PF00884 Sulfatase RB12432 PF00884 Sulfatase RB12434 PF13181 Tetratricopeptide repeat RB12434 PF13231 RB12434 RB12434 PF13424 Tetratricopeptide repeat RB12434 PF13431 Tetratricopeptide repeat RB12436 PF00950 RB12436 RB12436 PF02742 Iron dependent repressor, metal binding and dimerisation domain RB12437 PF00950 RB12437 RB12437 PF02742 Iron dependent repressor, metal binding and dimerisation domain RB12438 PF00005 ABC transporter RB12439 PF07625 RB12439 RB12440 PF01297 Periplasmic solute binding protein family RB12441 PF00293 NUDIX domain RB12445 PF02223 Thymidylate kinase RB12459 PF05068 Mannitol repressor RB12460 PF07608 RB12460 RB12468 PF13559 RB12468 RB1248 PF00005 ABC transporter RB12480 PF00925 GTP cyclohydrolase II RB12480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RB12482 PF07859 alpha/beta hydrolase fold RB12486 PF00069 Protein kinase domain RB12489 PF07610 RB12489 RB12495 PF02120 Flagellar hook-length control protein FliK RB12499 PF02050 Flagellar FliJ protein RB1250 PF09822 RB1250 RB1250 PF13346 RB1250 RB12500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RB12501 PF02108 RB12501 RB12502 PF14841 FliG middle domain RB12506 PF01740 STAS domain RB12510 PF00793 DAHP synthetase I family RB12513 PF00460 Flagella basal body rod protein RB12513 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RB12513 PF07559 Flagellar basal body protein FlaE RB12514 PF03963 RB12514 RB12518 PF13437 HlyD family secretion protein RB12518 PF13533 Biotin-lipoyl like RB12519 PF13437 HlyD family secretion protein RB1252 PF14238 RB1252 RB12524 PF00472 RF-1 domain RB12526 PF01694 Rhomboid family RB12532 PF00149 Calcineurin-like phosphoesterase RB12532 PF16656 RB12532 RB12533 PF07586 RB12533 RB12534 PF07624 RB12534 RB12534 PF07626 RB12534 RB12534 PF07627 RB12534 RB12534 PF07631 RB12534 RB12534 PF07635 RB12534 RB12534 PF07637 RB12534 RB12538 PF03983 SLA1 homology domain 1, SHD1 RB12541 PF08534 Redoxin RB12549 PF01170 Putative RNA methylase family UPF0020 RB12549 PF02926 THUMP domain RB12551 PF00487 RB12551 RB12556 PF12006 RB12556 RB12559 PF01979 Amidohydrolase family RB12562 PF13360 PQQ-like domain RB12564 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB12566 PF07394 RB12566 RB12567 PF07583 RB12567 RB12567 PF07587 RB12567 RB12567 PF07635 RB12567 RB1257 PF13088 BNR repeat-like domain RB12571 PF00498 FHA domain RB12571 PF00990 GGDEF domain RB12572 PF00069 Protein kinase domain RB12577 PF01132 Elongation factor P (EF-P) OB domain RB12577 PF08207 Elongation factor P (EF-P) KOW-like domain RB12577 PF09285 Elongation factor P, C-terminal RB12586 PF14499 Domain of unknown function (DUF4437) RB12590 PF00534 Glycosyl transferases group 1 RB12590 PF13439 Glycosyltransferase Family 4 RB12597 PF00180 Isocitrate/isopropylmalate dehydrogenase RB12598 PF01148 Cytidylyltransferase family RB12599 PF03358 NADPH-dependent FMN reductase RB12601 PF03808 RB12601 RB12602 PF01522 Polysaccharide deacetylase RB12604 PF13579 Glycosyl transferase 4-like domain RB12604 PF13692 Glycosyl transferases group 1 RB12606 PF02397 RB12606 RB12608 PF02706 Chain length determinant protein RB12611 PF13847 Methyltransferase domain RB12614 PF00303 Thymidylate synthase RB12617 PF00186 Dihydrofolate reductase RB1262 PF02811 PHP domain RB1262 PF07733 Bacterial DNA polymerase III alpha subunit RB1262 PF14579 Helix-hairpin-helix motif RB12623 PF00416 Ribosomal protein S13/S18 RB12625 PF00411 Ribosomal protein S11 RB12626 PF01000 RNA polymerase Rpb3/RpoA insert domain RB12626 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RB12626 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RB12628 PF01196 Ribosomal protein L17 RB1263 PF01207 Dihydrouridine synthase (Dus) RB12631 PF04909 Amidohydrolase RB12633 PF13621 Cupin-like domain RB12634 PF09055 Nickel-containing superoxide dismutase RB12636 PF02222 ATP-grasp domain RB12638 PF02558 Ketopantoate reductase PanE/ApbA RB12638 PF08546 Ketopantoate reductase PanE/ApbA C terminal RB12640 PF03321 GH3 auxin-responsive promoter RB12645 PF11325 RB12645 RB12646 PF00512 His Kinase A (phospho-acceptor) domain RB12646 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB12652 PF01380 SIS domain RB12652 PF13522 Glutamine amidotransferase domain RB12656 PF00330 Aconitase family (aconitate hydratase) RB12658 PF00694 Aconitase C-terminal domain RB12661 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RB12664 PF02085 Class III cytochrome C family RB12666 PF01568 Molydopterin dinucleotide binding domain RB12666 PF12838 4Fe-4S dicluster domain RB12669 PF03916 RB12669 RB12673 PF11821 RB12673 RB12673 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB12679 PF02630 SCO1/SenC RB12681 PF00034 Cytochrome c RB12681 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RB12681 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RB12683 PF00115 Cytochrome C and Quinol oxidase polypeptide I RB12685 PF00510 Cytochrome c oxidase subunit III RB12687 PF03626 RB12687 RB12690 PF02348 Cytidylyltransferase RB12694 PF00069 Protein kinase domain RB12697 PF00404 Dockerin type I repeat RB12697 PF04151 Bacterial pre-peptidase C-terminal domain RB12697 PF07595 RB12697 RB127 PF00482 Type II secretion system (T2SS), protein F RB1270 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease RB12713 PF01040 UbiA prenyltransferase family RB12718 PF01966 HD domain RB12720 PF00404 Dockerin type I repeat RB12720 PF04151 Bacterial pre-peptidase C-terminal domain RB12720 PF07595 RB12720 RB12724 PF01555 DNA methylase RB12730 PF04542 Sigma-70 region 2 RB12730 PF08281 Sigma-70, region 4 RB12732 PF07394 RB12732 RB12734 PF07583 RB12734 RB12734 PF07587 RB12734 RB1274 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RB12740 PF08450 SMP-30/Gluconolaconase/LRE-like region RB12745 PF00586 AIR synthase related protein, N-terminal domain RB12745 PF02769 AIR synthase related protein, C-terminal domain RB12746 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RB12746 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RB12752 PF13180 PDZ domain RB12752 PF13365 Trypsin-like peptidase domain RB12756 PF00682 HMGL-like RB12756 PF08502 LeuA allosteric (dimerisation) domain RB12762 PF02867 Ribonucleotide reductase, barrel domain RB12762 PF08471 RB12762 RB12766 PF00498 FHA domain RB12766 PF00563 EAL domain RB12768 PF00437 Type II/IV secretion system protein RB12768 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RB12773 PF00437 Type II/IV secretion system protein RB12774 PF00437 Type II/IV secretion system protein RB12774 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RB12778 PF05635 23S rRNA-intervening sequence protein RB12781 PF00482 Type II secretion system (T2SS), protein F RB12783 PF13633 Prokaryotic N-terminal methylation site RB12785 PF07963 Prokaryotic N-terminal methylation motif RB12786 PF13633 Prokaryotic N-terminal methylation site RB1279 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RB12799 PF00476 DNA polymerase family A RB12799 PF01367 5'-3' exonuclease, C-terminal SAM fold RB12799 PF01612 3'-5' exonuclease RB12799 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RB128 PF00437 Type II/IV secretion system protein RB12812 PF00108 Thiolase, N-terminal domain RB12812 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RB12816 PF07722 Peptidase C26 RB12821 PF01245 Ribosomal protein L19 RB12823 PF01746 tRNA (Guanine-1)-methyltransferase RB12824 PF00886 Ribosomal protein S16 RB12825 PF00448 SRP54-type protein, GTPase domain RB12825 PF02881 SRP54-type protein, helical bundle domain RB12825 PF02978 Signal peptide binding domain RB12831 PF00535 Glycosyl transferase family 2 RB12839 PF00687 Ribosomal protein L1p/L10e family RB12840 PF00466 Ribosomal protein L10 RB12842 PF00542 Ribosomal protein L7/L12 C-terminal domain RB12842 PF16320 RB12842 RB12844 PF01261 Xylose isomerase-like TIM barrel RB12847 PF07628 RB12847 RB12850 PF07592 RB12850 RB12854 PF00551 Formyl transferase RB12854 PF02911 Formyl transferase, C-terminal domain RB12856 PF01327 Polypeptide deformylase RB12858 PF00005 ABC transporter RB12858 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RB12859 PF00005 ABC transporter RB12859 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RB1286 PF01609 Transposase DDE domain RB1286 PF13808 RB1286 RB12860 PF00528 Binding-protein-dependent transport system inner membrane component RB12860 PF12911 RB12860 RB12861 PF00528 Binding-protein-dependent transport system inner membrane component RB12862 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RB12864 PF00155 Aminotransferase class I and II RB12866 PF02810 SEC-C motif RB12866 PF06167 Glucose-regulated metallo-peptidase M90 RB12875 PF07596 RB12875 RB12877 PF07628 RB12877 RB1288 PF13637 Ankyrin repeats (many copies) RB12881 PF00072 Response regulator receiver domain RB12885 PF00849 RNA pseudouridylate synthase RB12886 PF03741 RB12886 RB12891 PF02585 GlcNAc-PI de-N-acetylase RB12897 PF01261 Xylose isomerase-like TIM barrel RB12902 PF00069 Protein kinase domain RB12904 PF01039 Carboxyl transferase domain RB12905 PF00205 Thiamine pyrophosphate enzyme, central domain RB12905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RB12905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RB12907 PF02537 RB12907 RB12921 PF00456 Transketolase, thiamine diphosphate binding domain RB12921 PF02779 Transketolase, pyrimidine binding domain RB12921 PF02780 Transketolase, C-terminal domain RB12924 PF00709 Adenylosuccinate synthetase RB12925 PF07597 RB12925 RB12926 PF12975 Domain of unknown function (DUF3859) RB12928 PF00144 Beta-lactamase RB12934 PF01168 Alanine racemase, N-terminal domain RB12940 PF01527 Transposase RB12941 PF00665 Integrase core domain RB12941 PF13276 RB12941 RB12942 PF13360 PQQ-like domain RB12945 PF00472 RF-1 domain RB12946 PF02151 UvrB/uvrC motif RB12949 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB12952 PF00072 Response regulator receiver domain RB12952 PF02954 Bacterial regulatory protein, Fis family RB12963 PF04055 Radical SAM superfamily RB12965 PF04972 BON domain RB12994 PF00027 Cyclic nucleotide-binding domain RB12994 PF13247 4Fe-4S dicluster domain RB130 PF07596 RB130 RB130 PF13633 Prokaryotic N-terminal methylation site RB1300 PF07596 RB1300 RB13002 PF04389 Peptidase family M28 RB13005 PF08238 Sel1 repeat RB13021 PF13516 Leucine Rich repeat RB13024 PF12570 RB13024 RB13025 PF01494 FAD binding domain RB13026 PF01494 FAD binding domain RB13030 PF07596 RB13030 RB13030 PF13633 Prokaryotic N-terminal methylation site RB13032 PF03773 RB13032 RB13037 PF07726 ATPase family associated with various cellular activities (AAA) RB13038 PF01841 Transglutaminase-like superfamily RB13042 PF01882 RB13042 RB13048 PF13360 PQQ-like domain RB13053 PF11162 RB13053 RB13059 PF04021 RB13059 RB13062 PF01478 Type IV leader peptidase family RB13063 PF07811 RB13063 RB13068 PF13400 RB13068 RB13071 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RB13073 PF00437 Type II/IV secretion system protein RB13074 PF00482 Type II secretion system (T2SS), protein F RB13077 PF00482 Type II secretion system (T2SS), protein F RB13078 PF02643 Uncharacterized ACR, COG1430 RB1308 PF01593 Flavin containing amine oxidoreductase RB13080 PF13386 RB13080 RB13084 PF05685 Putative restriction endonuclease RB13090 PF13738 Pyridine nucleotide-disulphide oxidoreductase RB13091 PF02492 CobW/HypB/UreG, nucleotide-binding domain RB13091 PF07683 Cobalamin synthesis protein cobW C-terminal domain RB13094 PF02492 CobW/HypB/UreG, nucleotide-binding domain RB13094 PF07683 Cobalamin synthesis protein cobW C-terminal domain RB13097 PF03203 RB13097 RB13099 PF01475 Ferric uptake regulator family RB1310 PF00005 ABC transporter RB13104 PF00263 RB13104 RB13104 PF13629 RB13104 RB13107 PF07721 Tetratricopeptide repeat RB13107 PF14559 Tetratricopeptide repeat RB1311 PF16962 RB1311 RB13110 PF00149 Calcineurin-like phosphoesterase RB13111 PF00293 NUDIX domain RB13112 PF00072 Response regulator receiver domain RB13112 PF00512 His Kinase A (phospho-acceptor) domain RB13112 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB13112 PF08447 PAS fold RB13117 PF00072 Response regulator receiver domain RB13118 PF00072 Response regulator receiver domain RB13118 PF03861 ANTAR domain RB13124 PF07583 RB13124 RB13124 PF07587 RB13124 RB13126 PF07394 RB13126 RB13131 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB13132 PF07394 RB13132 RB13137 PF07583 RB13137 RB13137 PF07587 RB13137 RB13137 PF07635 RB13137 RB13137 PF07640 RB13137 RB13139 PF12833 Helix-turn-helix domain RB13139 PF13377 Periplasmic binding protein-like domain RB13140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RB13140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RB13142 PF07644 RB13142 RB13146 PF04616 Glycosyl hydrolases family 43 RB13147 PF00884 Sulfatase RB13147 PF14707 C-terminal region of aryl-sulfatase RB13148 PF00884 Sulfatase RB13150 PF03629 Domain of unknown function (DUF303) RB13154 PF07859 alpha/beta hydrolase fold RB13155 PF00884 Sulfatase RB13156 PF07859 alpha/beta hydrolase fold RB13157 PF00884 Sulfatase RB13162 PF13229 Right handed beta helix region RB13165 PF12833 Helix-turn-helix domain RB13165 PF13377 Periplasmic binding protein-like domain RB1317 PF00682 HMGL-like RB1317 PF08502 LeuA allosteric (dimerisation) domain RB13170 PF07596 RB13170 RB13175 PF00072 Response regulator receiver domain RB13175 PF00512 His Kinase A (phospho-acceptor) domain RB13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB13175 PF08447 PAS fold RB13175 PF08448 PAS fold RB13175 PF13426 PAS domain RB13180 PF06745 KaiC RB13181 PF00072 Response regulator receiver domain RB13181 PF00512 His Kinase A (phospho-acceptor) domain RB13181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB13181 PF08447 PAS fold RB13181 PF08448 PAS fold RB13184 PF13899 Thioredoxin-like RB13186 PF00082 Subtilase family RB13189 PF13546 RB13189 RB1319 PF00133 tRNA synthetases class I (I, L, M and V) RB1319 PF08264 Anticodon-binding domain of tRNA RB1319 PF10458 Valyl tRNA synthetase tRNA binding arm RB13193 PF00004 ATPase family associated with various cellular activities (AAA) RB13209 PF00892 EamA-like transporter family RB1321 PF00480 ROK family RB13211 PF00535 Glycosyl transferase family 2 RB13211 PF13231 RB13211 RB13215 PF05569 BlaR1 peptidase M56 RB13217 PF03965 Penicillinase repressor RB13220 PF07596 RB13220 RB13222 PF04832 SOUL heme-binding protein RB13224 PF11066 RB13224 RB13224 PF13460 NADH(P)-binding RB13225 PF00270 DEAD/DEAH box helicase RB13225 PF00271 Helicase conserved C-terminal domain RB13225 PF16124 RB13225 RB1323 PF05977 Transmembrane secretion effector RB13231 PF05343 M42 glutamyl aminopeptidase RB13235 PF07811 RB13235 RB13237 PF00092 von Willebrand factor type A domain RB13237 PF13400 RB13237 RB13238 PF07811 RB13238 RB13241 PF04542 Sigma-70 region 2 RB13241 PF08281 Sigma-70, region 4 RB1325 PF00005 ABC transporter RB13253 PF16925 RB13253 RB13257 PF00561 alpha/beta hydrolase fold RB13259 PF13204 Protein of unknown function (DUF4038) RB13259 PF16586 RB13259 RB13260 PF00107 Zinc-binding dehydrogenase RB13260 PF08240 Alcohol dehydrogenase GroES-like domain RB13261 PF00749 tRNA synthetases class I (E and Q), catalytic domain RB13263 PF00152 tRNA synthetases class II (D, K and N) RB13263 PF01336 OB-fold nucleic acid binding domain RB13264 PF00501 AMP-binding enzyme RB13264 PF13193 AMP-binding enzyme C-terminal domain RB13264 PF16177 RB13264 RB13265 PF00069 Protein kinase domain RB13271 PF07478 D-ala D-ala ligase C-terminus RB13273 PF15887 RB13273 RB1329 PF02563 Polysaccharide biosynthesis/export protein RB1329 PF10531 SLBB domain RB13291 PF00263 RB13291 RB13291 PF03958 Bacterial type II/III secretion system short domain RB13298 PF00474 Sodium:solute symporter family RB133 PF04228 RB133 RB13301 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RB13301 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RB13303 PF00733 Asparagine synthase RB13303 PF13537 Glutamine amidotransferase domain RB13304 PF01546 Peptidase family M20/M25/M40 RB13304 PF07687 Peptidase dimerisation domain RB13306 PF00857 Isochorismatase family RB13309 PF13435 Cytochrome c554 and c-prime RB13312 PF07596 RB13312 RB13312 PF13633 Prokaryotic N-terminal methylation site RB13319 PF07596 RB13319 RB13319 PF13633 Prokaryotic N-terminal methylation site RB13327 PF07596 RB13327 RB13327 PF13633 Prokaryotic N-terminal methylation site RB13330 PF07719 Tetratricopeptide repeat RB13330 PF13231 RB13330 RB1336 PF07238 PilZ domain RB1337 PF13202 EF hand RB1342 PF00813 RB1342 RB1344 PF01313 RB1344 RB1345 PF01311 RB1345 RB1347 PF01312 FlhB HrpN YscU SpaS Family RB1348 PF09365 RB1348 RB1352 PF03841 L-seryl-tRNA selenium transferase RB1353 PF01566 RB1353 RB1355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RB1357 PF00990 GGDEF domain RB1358 PF00483 Nucleotidyl transferase RB1359 PF13180 PDZ domain RB1359 PF13365 Trypsin-like peptidase domain RB136 PF01571 Aminomethyltransferase folate-binding domain RB136 PF08669 Glycine cleavage T-protein C-terminal barrel domain RB1363 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RB1363 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RB1367 PF03808 RB1367 RB1371 PF01343 Peptidase family S49 RB1372 PF04932 RB1372 RB138 PF07638 ECF sigma factor RB1381 PF01916 Deoxyhypusine synthase RB1386 PF01156 Inosine-uridine preferring nucleoside hydrolase RB1391 PF01370 NAD dependent epimerase/dehydratase family RB1391 PF03364 Polyketide cyclase / dehydrase and lipid transport RB1391 PF08338 Domain of unknown function (DUF1731) RB1392 PF04542 Sigma-70 region 2 RB1392 PF04545 Sigma-70, region 4 RB1395 PF12728 Helix-turn-helix domain RB1398 PF01476 LysM domain RB1398 PF03734 L,D-transpeptidase catalytic domain RB140 PF00069 Protein kinase domain RB1405 PF00263 RB1405 RB1411 PF00701 Dihydrodipicolinate synthetase family RB1412 PF00459 Inositol monophosphatase family RB1414 PF07596 RB1414 RB1414 PF13633 Prokaryotic N-terminal methylation site RB142 PF16576 RB142 RB1420 PF01156 Inosine-uridine preferring nucleoside hydrolase RB1427 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RB1430 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RB1430 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RB1431 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RB1432 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RB1433 PF04039 RB1433 RB1434 PF13244 RB1434 RB1436 PF03334 RB1436 RB1439 PF04066 RB1439 RB144 PF16576 RB144 RB1442 PF01899 RB1442 RB1444 PF13432 Tetratricopeptide repeat RB1451 PF13360 PQQ-like domain RB1454 PF12833 Helix-turn-helix domain RB1454 PF13377 Periplasmic binding protein-like domain RB1456 PF00884 Sulfatase RB146 PF13437 HlyD family secretion protein RB146 PF13533 Biotin-lipoyl like RB1461 PF06271 RB1461 RB1464 PF00884 Sulfatase RB1467 PF01738 Dienelactone hydrolase family RB1470 PF13229 Right handed beta helix region RB1474 PF07629 RB1474 RB1475 PF00884 Sulfatase RB1475 PF07636 RB1475 RB1477 PF00884 Sulfatase RB148 PF01043 SecA preprotein cross-linking domain RB148 PF07517 SecA DEAD-like domain RB1480 PF00920 Dehydratase family RB1481 PF03473 MOSC domain RB1483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB1485 PF02811 PHP domain RB1485 PF14520 Helix-hairpin-helix domain RB1485 PF14716 Helix-hairpin-helix domain RB1485 PF14791 DNA polymerase beta thumb RB1487 PF03992 Antibiotic biosynthesis monooxygenase RB1488 PF00027 Cyclic nucleotide-binding domain RB1488 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB149 PF02321 Outer membrane efflux protein RB1495 PF01882 RB1495 RB1499 PF07726 ATPase family associated with various cellular activities (AAA) RB1502 PF00072 Response regulator receiver domain RB1507 PF01715 IPP transferase RB1508 PF00583 Acetyltransferase (GNAT) family RB1516 PF01882 RB1516 RB1517 PF00005 ABC transporter RB1522 PF07596 RB1522 RB1522 PF13633 Prokaryotic N-terminal methylation site RB1526 PF02698 DUF218 domain RB1527 PF13472 GDSL-like Lipase/Acylhydrolase family RB1529 PF02310 B12 binding domain RB1529 PF04055 Radical SAM superfamily RB1532 PF00069 Protein kinase domain RB1533 PF14486 Domain of unknown function (DUF4432) RB1538 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RB154 PF00028 Cadherin domain RB154 PF00058 Low-density lipoprotein receptor repeat class B RB154 PF14252 RB154 RB1545 PF00263 RB1545 RB1545 PF03958 Bacterial type II/III secretion system short domain RB1555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB1559 PF00300 Histidine phosphatase superfamily (branch 1) RB1561 PF00834 Ribulose-phosphate 3 epimerase family RB1566 PF00263 RB1566 RB1571 PF01068 ATP dependent DNA ligase domain RB1571 PF04675 DNA ligase N terminus RB1571 PF04679 ATP dependent DNA ligase C terminal region RB1574 PF01261 Xylose isomerase-like TIM barrel RB1577 PF00270 DEAD/DEAH box helicase RB1577 PF00271 Helicase conserved C-terminal domain RB1577 PF08494 RB1577 RB1578 PF00749 tRNA synthetases class I (E and Q), catalytic domain RB1578 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RB1579 PF02074 Carboxypeptidase Taq (M32) metallopeptidase RB1584 PF00815 Histidinol dehydrogenase RB1586 PF00109 Beta-ketoacyl synthase, N-terminal domain RB1586 PF02801 Beta-ketoacyl synthase, C-terminal domain RB1588 PF00550 Phosphopantetheine attachment site RB159 PF00072 Response regulator receiver domain RB159 PF00512 His Kinase A (phospho-acceptor) domain RB159 PF01627 Hpt domain RB159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB159 PF13426 PAS domain RB1591 PF01593 Flavin containing amine oxidoreductase RB1593 PF03971 Monomeric isocitrate dehydrogenase RB1595 PF00891 O-methyltransferase RB1595 PF16864 RB1595 RB1597 PF08719 Domain of unknown function (DUF1768) RB1599 PF00857 Isochorismatase family RB16 PF07628 RB16 RB1606 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RB1608 PF00144 Beta-lactamase RB161 PF00072 Response regulator receiver domain RB161 PF13487 HD domain RB1610 PF00884 Sulfatase RB162 PF10672 S-adenosylmethionine-dependent methyltransferase RB1621 PF01569 PAP2 superfamily RB1628 PF04367 RB1628 RB1629 PF00480 ROK family RB1630 PF00009 Elongation factor Tu GTP binding domain RB1630 PF00679 Elongation factor G C-terminus RB1630 PF03144 Elongation factor Tu domain 2 RB1630 PF06421 GTP-binding protein LepA C-terminus RB1637 PF00535 Glycosyl transferase family 2 RB1639 PF01593 Flavin containing amine oxidoreductase RB1641 PF01699 Sodium/calcium exchanger protein RB165 PF00665 Integrase core domain RB165 PF01527 Transposase RB165 PF13276 RB165 RB1653 PF01266 FAD dependent oxidoreductase RB1653 PF04820 Tryptophan halogenase RB1656 PF00990 GGDEF domain RB1656 PF01966 HD domain RB1656 PF08448 PAS fold RB1661 PF00028 Cadherin domain RB1661 PF00059 Lectin C-type domain RB1661 PF00354 Pentaxin family RB1661 PF04862 RB1661 RB1661 PF13385 Concanavalin A-like lectin/glucanases superfamily RB1661 PF14252 RB1661 RB1661 PF16184 RB1661 RB1677 PF02321 Outer membrane efflux protein RB168 PF14690 RB168 RB1680 PF16576 RB1680 RB1685 PF16576 RB1685 RB1691 PF04932 RB1691 RB1696 PF00809 Pterin binding enzyme RB1699 PF07610 RB1699 RB17 PF07628 RB17 RB170 PF01527 Transposase RB1703 PF02545 Maf-like protein RB1706 PF00308 Bacterial dnaA protein RB1706 PF08299 Bacterial dnaA protein helix-turn-helix RB1708 PF00772 DnaB-like helicase N terminal domain RB1708 PF03796 DnaB-like helicase C terminal domain RB1709 PF07628 RB1709 RB171 PF00665 Integrase core domain RB171 PF13276 RB171 RB1711 PF00072 Response regulator receiver domain RB1717 PF13777 RB1717 RB172 PF01610 RB172 RB1722 PF01345 RB1722 RB1728 PF06724 RB1728 RB1731 PF10077 RB1731 RB1732 PF00795 Carbon-nitrogen hydrolase RB1736 PF00884 Sulfatase RB1739 PF01841 Transglutaminase-like superfamily RB1742 PF00970 Oxidoreductase FAD-binding domain RB1742 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B RB1743 PF13280 RB1743 RB1753 PF00210 Ferritin-like domain RB1756 PF00034 Cytochrome c RB1756 PF13646 HEAT repeats RB1759 PF01966 HD domain RB1764 PF13581 Histidine kinase-like ATPase domain RB1767 PF01345 RB1767 RB1776 PF07596 RB1776 RB1776 PF13633 Prokaryotic N-terminal methylation site RB1784 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RB1784 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RB1784 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RB1789 PF00498 FHA domain RB1790 PF04542 Sigma-70 region 2 RB1790 PF08281 Sigma-70, region 4 RB1798 PF07726 ATPase family associated with various cellular activities (AAA) RB18 PF07628 RB18 RB1800 PF01882 RB1800 RB1819 PF01370 NAD dependent epimerase/dehydratase family RB1821 PF00069 Protein kinase domain RB183 PF02321 Outer membrane efflux protein RB1831 PF05896 RB1831 RB1831 PF11973 RB1831 RB1832 PF03116 RB1832 RB1833 PF04205 FMN-binding domain RB1835 PF02508 RB1835 RB1836 PF02508 RB1836 RB1837 PF00111 2Fe-2S iron-sulfur cluster binding domain RB1837 PF00175 Oxidoreductase NAD-binding domain RB1837 PF00970 Oxidoreductase FAD-binding domain RB1839 PF02424 ApbE family RB1839 PF04400 RB1839 RB1840 PF01648 4'-phosphopantetheinyl transferase superfamily RB1854 PF06283 Trehalose utilisation RB1854 PF06439 Domain of Unknown Function (DUF1080) RB1856 PF00490 Delta-aminolevulinic acid dehydratase RB1858 PF10294 Putative methyltransferase RB1862 PF00392 Bacterial regulatory proteins, gntR family RB1866 PF00005 ABC transporter RB1874 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RB188 PF16576 RB188 RB1883 PF13401 AAA domain RB1885 PF13649 Methyltransferase domain RB1887 PF00171 Aldehyde dehydrogenase family RB1889 PF00069 Protein kinase domain RB1889 PF00400 WD domain, G-beta repeat RB1892 PF00069 Protein kinase domain RB1893 PF00069 Protein kinase domain RB1893 PF00400 WD domain, G-beta repeat RB1895 PF13086 AAA domain RB1895 PF13087 AAA domain RB1896 PF06961 RB1896 RB1898 PF01761 3-dehydroquinate synthase RB19 PF07628 RB19 RB1900 PF00467 KOW motif RB1900 PF02357 Transcription termination factor nusG RB1902 PF04324 BFD-like [2Fe-2S] binding domain RB1902 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB1903 PF14537 Cytochrome c3 RB1908 PF11845 RB1908 RB1909 PF00042 Globin RB191 PF00873 AcrB/AcrD/AcrF family RB1917 PF00400 WD domain, G-beta repeat RB1917 PF13226 RB1917 RB1924 PF03160 Calx-beta domain RB1924 PF17164 RB1924 RB1930 PF07589 RB1930 RB1934 PF00404 Dockerin type I repeat RB1934 PF02872 5'-nucleotidase, C-terminal domain RB1936 PF00085 Thioredoxin RB1936 PF13620 Carboxypeptidase regulatory-like domain RB1939 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB195 PF07396 Phosphate-selective porin O and P RB1958 PF03136 Pup-ligase protein RB1964 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RB1964 PF14559 Tetratricopeptide repeat RB1970 PF01702 Queuine tRNA-ribosyltransferase RB1972 PF05090 RB1972 RB198 PF00884 Sulfatase RB1988 PF00034 Cytochrome c RB1988 PF07995 Glucose / Sorbosone dehydrogenase RB1988 PF13646 HEAT repeats RB1992 PF06983 3-demethylubiquinone-9 3-methyltransferase RB1993 PF01743 Poly A polymerase head domain RB1993 PF12627 Probable RNA and SrmB- binding site of polymerase A RB1998 PF00391 PEP-utilising enzyme, mobile domain RB1998 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RB1998 PF02896 PEP-utilising enzyme, TIM barrel domain RB200 PF00884 Sulfatase RB200 PF16347 RB200 RB2001 PF13439 Glycosyltransferase Family 4 RB2001 PF13692 Glycosyl transferases group 1 RB2008 PF00512 His Kinase A (phospho-acceptor) domain RB2008 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB2008 PF08447 PAS fold RB201 PF01261 Xylose isomerase-like TIM barrel RB2010 PF06877 Regulator of ribonuclease activity B RB2012 PF07585 RB2012 RB2013 PF00271 Helicase conserved C-terminal domain RB2013 PF01043 SecA preprotein cross-linking domain RB2013 PF07517 SecA DEAD-like domain RB2022 PF13277 YmdB-like protein RB2024 PF00575 S1 RNA binding domain RB203 PF00248 Aldo/keto reductase family RB2032 PF00487 RB2032 RB2038 PF14229 RB2038 RB2051 PF04338 Protein of unknown function, DUF481 RB2053 PF07811 RB2053 RB2055 PF00092 von Willebrand factor type A domain RB2056 PF07811 RB2056 RB206 PF07625 RB206 RB2062 PF13180 PDZ domain RB2062 PF13365 Trypsin-like peptidase domain RB2066 PF13180 PDZ domain RB2066 PF13365 Trypsin-like peptidase domain RB2075 PF11950 RB2075 RB2078 PF05544 Proline racemase RB2081 PF00326 Prolyl oligopeptidase family RB2081 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region RB2081 PF01847 von Hippel-Lindau disease tumour suppressor protein RB2081 PF05960 Bacterial protein of unknown function (DUF885) RB2082 PF00975 Thioesterase domain RB2085 PF00884 Sulfatase RB2086 PF14559 Tetratricopeptide repeat RB2091 PF01522 Polysaccharide deacetylase RB2092 PF04909 Amidohydrolase RB2092 PF16011 RB2092 RB2096 PF12006 RB2096 RB2098 PF00144 Beta-lactamase RB2098 PF07969 Amidohydrolase family RB210 PF09835 RB210 RB2103 PF00501 AMP-binding enzyme RB2103 PF00550 Phosphopantetheine attachment site RB2110 PF01554 MatE RB2114 PF00330 Aconitase family (aconitate hydratase) RB2114 PF00694 Aconitase C-terminal domain RB2115 PF01564 Spermine/spermidine synthase RB2117 PF07719 Tetratricopeptide repeat RB2118 PF04551 GcpE protein RB2121 PF03976 Polyphosphate kinase 2 (PPK2) RB2123 PF07640 RB2123 RB213 PF07583 RB213 RB213 PF07587 RB213 RB213 PF07635 RB213 RB2132 PF07619 RB2132 RB2132 PF07622 RB2132 RB2135 PF00884 Sulfatase RB2140 PF07640 RB2140 RB2141 PF00849 RNA pseudouridylate synthase RB2142 PF01513 ATP-NAD kinase RB2143 PF02779 Transketolase, pyrimidine binding domain RB2143 PF02780 Transketolase, C-terminal domain RB2143 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RB2144 PF00348 Polyprenyl synthetase RB2146 PF02609 Exonuclease VII small subunit RB2152 PF00293 NUDIX domain RB2154 PF13197 RB2154 RB2160 PF03065 Glycosyl hydrolase family 57 RB2160 PF09094 Domain of unknown function (DUF1925) RB2160 PF09095 Domain of unknown function (DUF1926) RB2162 PF00069 Protein kinase domain RB2166 PF13378 Enolase C-terminal domain-like RB2170 PF07394 RB2170 RB2174 PF00072 Response regulator receiver domain RB218 PF07394 RB218 RB2182 PF01609 Transposase DDE domain RB2182 PF13340 RB2182 RB2186 PF13546 RB2186 RB2193 PF14067 RB2193 RB2200 PF00924 Mechanosensitive ion channel RB2202 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RB2203 PF07623 RB2203 RB2204 PF13614 AAA domain RB2206 PF00535 Glycosyl transferase family 2 RB2209 PF03739 RB2209 RB2226 PF00400 WD domain, G-beta repeat RB2226 PF07583 RB2226 RB2226 PF07587 RB2226 RB2226 PF07635 RB2226 RB223 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RB2231 PF07394 RB2231 RB2238 PF00111 2Fe-2S iron-sulfur cluster binding domain RB2238 PF00175 Oxidoreductase NAD-binding domain RB2238 PF00970 Oxidoreductase FAD-binding domain RB2239 PF00106 short chain dehydrogenase RB2242 PF00106 short chain dehydrogenase RB2244 PF00255 Glutathione peroxidase RB2247 PF07639 RB2247 RB2253 PF02629 CoA binding domain RB2253 PF06971 Putative DNA-binding protein N-terminus RB2254 PF00884 Sulfatase RB2254 PF16347 RB2254 RB2261 PF00450 Serine carboxypeptidase RB2264 PF01741 Large-conductance mechanosensitive channel, MscL RB2265 PF07859 alpha/beta hydrolase fold RB2268 PF01641 SelR domain RB2278 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RB2283 PF07629 RB2283 RB2284 PF01548 RB2284 RB2284 PF02371 RB2284 RB2287 PF07625 RB2287 RB229 PF07585 RB229 RB2291 PF13614 AAA domain RB2296 PF02195 ParB-like nuclease domain RB2299 PF00069 Protein kinase domain RB2299 PF08447 PAS fold RB2299 PF13188 PAS domain RB2303 PF04542 Sigma-70 region 2 RB2303 PF08281 Sigma-70, region 4 RB2308 PF07585 RB2308 RB2339 PF07609 RB2339 RB2349 PF07596 RB2349 RB2349 PF13544 RB2349 RB2355 PF13302 Acetyltransferase (GNAT) domain RB236 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RB2364 PF01694 Rhomboid family RB2367 PF00884 Sulfatase RB2373 PF00107 Zinc-binding dehydrogenase RB2373 PF08240 Alcohol dehydrogenase GroES-like domain RB2377 PF00884 Sulfatase RB2377 PF04616 Glycosyl hydrolases family 43 RB2381 PF02321 Outer membrane efflux protein RB2383 PF00873 AcrB/AcrD/AcrF family RB2386 PF16576 RB2386 RB2391 PF11964 SpoIIAA-like RB2394 PF13189 Cytidylate kinase-like family RB2396 PF00072 Response regulator receiver domain RB2396 PF00158 Sigma-54 interaction domain RB2396 PF02954 Bacterial regulatory protein, Fis family RB2398 PF09851 RB2398 RB24 PF00034 Cytochrome c RB2401 PF00404 Dockerin type I repeat RB2401 PF01569 PAP2 superfamily RB2401 PF07595 RB2401 RB2403 PF01232 Mannitol dehydrogenase Rossmann domain RB2403 PF08125 Mannitol dehydrogenase C-terminal domain RB2408 PF01797 Transposase IS200 like RB2416 PF01841 Transglutaminase-like superfamily RB2420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB2429 PF00012 Hsp70 protein RB2432 PF05277 RB2432 RB2434 PF13275 S4 domain RB2435 PF03372 Endonuclease/Exonuclease/phosphatase family RB244 PF07596 RB244 RB244 PF13633 Prokaryotic N-terminal methylation site RB2440 PF00139 Legume lectin domain RB2440 PF03160 Calx-beta domain RB2440 PF07995 Glucose / Sorbosone dehydrogenase RB2440 PF14252 RB2440 RB2440 PF16841 RB2440 RB2442 PF00404 Dockerin type I repeat RB2442 PF07595 RB2442 RB2461 PF09721 RB2461 RB2464 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RB2464 PF02706 Chain length determinant protein RB2469 PF00535 Glycosyl transferase family 2 RB2470 PF00132 Bacterial transferase hexapeptide (six repeats) RB2471 PF00534 Glycosyl transferases group 1 RB2471 PF13579 Glycosyl transferase 4-like domain RB2473 PF00534 Glycosyl transferases group 1 RB2474 PF00534 Glycosyl transferases group 1 RB2475 PF01609 Transposase DDE domain RB2475 PF13808 RB2475 RB2479 PF05050 Methyltransferase FkbM domain RB2482 PF00534 Glycosyl transferases group 1 RB2484 PF00534 Glycosyl transferases group 1 RB2485 PF13692 Glycosyl transferases group 1 RB2487 PF05050 Methyltransferase FkbM domain RB249 PF01609 Transposase DDE domain RB2490 PF05050 Methyltransferase FkbM domain RB2493 PF13439 Glycosyltransferase Family 4 RB2493 PF13692 Glycosyl transferases group 1 RB2498 PF05050 Methyltransferase FkbM domain RB2499 PF00534 Glycosyl transferases group 1 RB2500 PF01370 NAD dependent epimerase/dehydratase family RB2502 PF00132 Bacterial transferase hexapeptide (six repeats) RB2502 PF14602 Hexapeptide repeat of succinyl-transferase RB2507 PF16363 RB2507 RB251 PF03129 Anticodon binding domain RB251 PF13393 Histidyl-tRNA synthetase RB2512 PF16363 RB2512 RB2514 PF07640 RB2514 RB2515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RB2515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RB2515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RB2518 PF16363 RB2518 RB252 PF03692 RB252 RB2520 PF07625 RB2520 RB2521 PF01370 NAD dependent epimerase/dehydratase family RB2532 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RB2533 PF04087 RB2533 RB2535 PF00356 Bacterial regulatory proteins, lacI family RB2535 PF13377 Periplasmic binding protein-like domain RB2543 PF00575 S1 RNA binding domain RB2547 PF13416 Bacterial extracellular solute-binding protein RB2549 PF00512 His Kinase A (phospho-acceptor) domain RB2549 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB2550 PF00072 Response regulator receiver domain RB2552 PF01118 Semialdehyde dehydrogenase, NAD binding domain RB2552 PF02774 Semialdehyde dehydrogenase, dimerisation domain RB2553 PF06245 RB2553 RB2556 PF07644 RB2556 RB2557 PF01797 Transposase IS200 like RB2558 PF00589 Phage integrase family RB2558 PF13495 Phage integrase, N-terminal SAM-like domain RB2559 PF04986 RB2559 RB2559 PF14319 RB2559 RB256 PF00551 Formyl transferase RB2560 PF07590 RB2560 RB2562 PF07644 RB2562 RB2566 PF00056 lactate/malate dehydrogenase, NAD binding domain RB2566 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RB2568 PF00596 Class II Aldolase and Adducin N-terminal domain RB2571 PF03319 Ethanolamine utilisation protein EutN/carboxysome RB2577 PF03319 Ethanolamine utilisation protein EutN/carboxysome RB2579 PF00171 Aldehyde dehydrogenase family RB2581 PF03319 Ethanolamine utilisation protein EutN/carboxysome RB2582 PF00871 Acetokinase family RB2585 PF00936 BMC domain RB2586 PF00936 BMC domain RB2588 PF06130 RB2588 RB2590 PF00455 RB2590 RB2590 PF08220 DeoR-like helix-turn-helix domain RB2593 PF00892 EamA-like transporter family RB2605 PF00034 Cytochrome c RB2605 PF00127 Copper binding proteins, plastocyanin/azurin family RB2605 PF00657 GDSL-like Lipase/Acylhydrolase RB2613 PF00884 Sulfatase RB2619 PF01026 TatD related DNase RB2621 PF00072 Response regulator receiver domain RB2621 PF00486 Transcriptional regulatory protein, C terminal RB2624 PF07589 RB2624 RB2626 PF13489 Methyltransferase domain RB2627 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RB2627 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RB2630 PF01018 GTP1/OBG RB2630 PF01926 50S ribosome-binding GTPase RB2632 PF03309 Type III pantothenate kinase RB2638 PF00128 Alpha amylase, catalytic domain RB2638 PF02806 Alpha amylase, C-terminal all-beta domain RB2638 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RB264 PF01165 Ribosomal protein S21 RB2640 PF01261 Xylose isomerase-like TIM barrel RB2642 PF14489 QueF-like protein RB2645 PF04055 Radical SAM superfamily RB2645 PF13394 4Fe-4S single cluster domain RB2651 PF13533 Biotin-lipoyl like RB2654 PF13437 HlyD family secretion protein RB2654 PF13533 Biotin-lipoyl like RB2656 PF14870 Photosynthesis system II assembly factor YCF48 RB2658 PF01261 Xylose isomerase-like TIM barrel RB2661 PF01565 FAD binding domain RB2661 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RB2663 PF00884 Sulfatase RB2671 PF00498 FHA domain RB2673 PF00069 Protein kinase domain RB2676 PF01416 tRNA pseudouridine synthase RB2680 PF07884 Vitamin K epoxide reductase family RB2680 PF13462 Thioredoxin RB2684 PF08448 PAS fold RB2684 PF12833 Helix-turn-helix domain RB2688 PF07583 RB2688 RB2688 PF07587 RB2688 RB2688 PF07635 RB2688 RB2690 PF07394 RB2690 RB2693 PF07583 RB2693 RB2693 PF07587 RB2693 RB2693 PF07635 RB2693 RB2697 PF07394 RB2697 RB27 PF07617 RB27 RB2701 PF00884 Sulfatase RB2701 PF16347 RB2701 RB2702 PF00722 Glycosyl hydrolases family 16 RB2707 PF00884 Sulfatase RB2710 PF01694 Rhomboid family RB2710 PF12122 Protein of unknown function (DUF3582) RB2711 PF00034 Cytochrome c RB2714 PF04402 Protein of unknown function (DUF541) RB2717 PF00782 Dual specificity phosphatase, catalytic domain RB2718 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RB2718 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB2725 PF02684 RB2725 RB2728 PF00512 His Kinase A (phospho-acceptor) domain RB2728 PF00672 HAMP domain RB2728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB273 PF06439 Domain of Unknown Function (DUF1080) RB2731 PF00072 Response regulator receiver domain RB2731 PF00158 Sigma-54 interaction domain RB2731 PF02954 Bacterial regulatory protein, Fis family RB2732 PF00884 Sulfatase RB2735 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RB2735 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RB2737 PF14080 RB2737 RB2743 PF00072 Response regulator receiver domain RB2743 PF00196 Bacterial regulatory proteins, luxR family RB2746 PF00701 Dihydrodipicolinate synthetase family RB2748 PF04055 Radical SAM superfamily RB2748 PF13394 4Fe-4S single cluster domain RB2749 PF01040 UbiA prenyltransferase family RB2750 PF02441 Flavoprotein RB2752 PF01209 ubiE/COQ5 methyltransferase family RB2754 PF13419 Haloacid dehalogenase-like hydrolase RB2761 PF00691 OmpA family RB2763 PF07586 RB2763 RB2764 PF07624 RB2764 RB2764 PF07626 RB2764 RB2764 PF07627 RB2764 RB2764 PF07631 RB2764 RB2764 PF07637 RB2764 RB2771 PF13975 RB2771 RB2774 PF03884 Domain of unknown function (DUF329) RB2780 PF01272 Transcription elongation factor, GreA/GreB, C-term RB2780 PF03449 Transcription elongation factor, N-terminal RB2782 PF07596 RB2782 RB2782 PF13633 Prokaryotic N-terminal methylation site RB2784 PF01957 NfeD-like C-terminal, partner-binding RB2785 PF01957 NfeD-like C-terminal, partner-binding RB2788 PF00375 Sodium:dicarboxylate symporter family RB279 PF00005 ABC transporter RB279 PF13732 RB279 RB2794 PF03372 Endonuclease/Exonuclease/phosphatase family RB2797 PF13435 Cytochrome c554 and c-prime RB2799 PF00248 Aldo/keto reductase family RB2809 PF03130 PBS lyase HEAT-like repeat RB281 PF00166 Chaperonin 10 Kd subunit RB2817 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RB2817 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RB282 PF01938 TRAM domain RB2822 PF07643 RB2822 RB2825 PF03009 Glycerophosphoryl diester phosphodiesterase family RB2833 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB2837 PF13360 PQQ-like domain RB2839 PF13509 S1 domain RB284 PF01966 HD domain RB284 PF13286 Phosphohydrolase-associated domain RB2840 PF04542 Sigma-70 region 2 RB2842 PF04773 FecR protein RB2842 PF13385 Concanavalin A-like lectin/glucanases superfamily RB2845 PF07583 RB2845 RB2845 PF07587 RB2845 RB2845 PF07635 RB2845 RB2848 PF07394 RB2848 RB2849 PF00085 Thioredoxin RB2850 PF07589 RB2850 RB2852 PF02517 CAAX protease self-immunity RB2855 PF00069 Protein kinase domain RB2860 PF11104 Type IV pilus assembly protein PilM; RB2871 PF06144 DNA polymerase III, delta subunit RB2872 PF00512 His Kinase A (phospho-acceptor) domain RB2872 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB2872 PF08447 PAS fold RB2872 PF08448 PAS fold RB2872 PF13426 PAS domain RB2878 PF09348 RB2878 RB2881 PF02535 RB2881 RB2883 PF07640 RB2883 RB2884 PF01370 NAD dependent epimerase/dehydratase family RB2885 PF07884 Vitamin K epoxide reductase family RB289 PF00535 Glycosyl transferase family 2 RB2894 PF02472 Biopolymer transport protein ExbD/TolR RB2895 PF02472 Biopolymer transport protein ExbD/TolR RB2897 PF13649 Methyltransferase domain RB2901 PF13243 Prenyltransferase-like RB2905 PF04468 RB2905 RB2908 PF13847 Methyltransferase domain RB291 PF01593 Flavin containing amine oxidoreductase RB2928 PF00583 Acetyltransferase (GNAT) family RB293 PF12804 MobA-like NTP transferase domain RB2931 PF13302 Acetyltransferase (GNAT) domain RB2936 PF12796 Ankyrin repeats (3 copies) RB2939 PF08592 RB2939 RB295 PF00994 Probable molybdopterin binding domain RB295 PF03453 MoeA N-terminal region (domain I and II) RB2960 PF13360 PQQ-like domain RB2966 PF00004 ATPase family associated with various cellular activities (AAA) RB2966 PF01434 Peptidase family M41 RB2968 PF03193 Protein of unknown function, DUF258 RB297 PF00909 Ammonium Transporter Family RB2970 PF08241 Methyltransferase domain RB2971 PF01261 Xylose isomerase-like TIM barrel RB2974 PF01966 HD domain RB2974 PF03445 RB2974 RB2974 PF08335 GlnD PII-uridylyltransferase RB2975 PF00543 Nitrogen regulatory protein P-II RB2976 PF01923 Cobalamin adenosyltransferase RB2978 PF00293 NUDIX domain RB2979 PF01322 Cytochrome C' RB2982 PF00571 CBS domain RB2982 PF00654 Voltage gated chloride channel RB2983 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RB2983 PF03466 LysR substrate binding domain RB2985 PF00534 Glycosyl transferases group 1 RB2985 PF13439 Glycosyltransferase Family 4 RB2986 PF00128 Alpha amylase, catalytic domain RB2986 PF11941 Domain of unknown function (DUF3459) RB2988 PF04041 Domain of unknown function (DUF377) RB299 PF00595 PDZ domain (Also known as DHR or GLGF) RB2990 PF00534 Glycosyl transferases group 1 RB2990 PF13439 Glycosyltransferase Family 4 RB2991 PF04041 Domain of unknown function (DUF377) RB2992 PF00391 PEP-utilising enzyme, mobile domain RB2992 PF02896 PEP-utilising enzyme, TIM barrel domain RB2992 PF05524 PEP-utilising enzyme, N-terminal RB3003 PF13360 PQQ-like domain RB3005 PF13453 RB3005 RB3006 PF00326 Prolyl oligopeptidase family RB3006 PF13088 BNR repeat-like domain RB301 PF00633 Helix-hairpin-helix motif RB301 PF00730 HhH-GPD superfamily base excision DNA repair protein RB301 PF14815 NUDIX domain RB3010 PF00141 Peroxidase RB3016 PF01906 Putative heavy-metal-binding RB3023 PF13180 PDZ domain RB3032 PF07690 Major Facilitator Superfamily RB3034 PF07624 RB3034 RB3034 PF07627 RB3034 RB3034 PF07631 RB3034 RB3034 PF07635 RB3034 RB3036 PF07586 RB3036 RB304 PF00034 Cytochrome c RB304 PF03150 Di-haem cytochrome c peroxidase RB3052 PF07623 RB3052 RB3056 PF07597 RB3056 RB3057 PF07636 RB3057 RB3065 PF08241 Methyltransferase domain RB307 PF00390 Malic enzyme, N-terminal domain RB307 PF03949 Malic enzyme, NAD binding domain RB307 PF13291 ACT domain RB3070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB3074 PF07623 RB3074 RB3075 PF00404 Dockerin type I repeat RB3075 PF07595 RB3075 RB3077 PF00404 Dockerin type I repeat RB3077 PF04151 Bacterial pre-peptidase C-terminal domain RB3100 PF07813 LTXXQ motif family protein RB3103 PF01336 OB-fold nucleic acid binding domain RB3103 PF02811 PHP domain RB3103 PF07733 Bacterial DNA polymerase III alpha subunit RB3103 PF14579 Helix-hairpin-helix motif RB3109 PF03150 Di-haem cytochrome c peroxidase RB3123 PF00722 Glycosyl hydrolases family 16 RB314 PF00698 Acyl transferase domain RB3144 PF00589 Phage integrase family RB3144 PF13495 Phage integrase, N-terminal SAM-like domain RB3145 PF04986 RB3145 RB3145 PF14319 RB3145 RB3146 PF07590 RB3146 RB3152 PF07623 RB3152 RB3153 PF07623 RB3153 RB3154 PF07623 RB3154 RB3155 PF07623 RB3155 RB3157 PF00589 Phage integrase family RB3157 PF13495 Phage integrase, N-terminal SAM-like domain RB3159 PF07629 RB3159 RB316 PF13561 Enoyl-(Acyl carrier protein) reductase RB3160 PF07596 RB3160 RB3160 PF13633 Prokaryotic N-terminal methylation site RB3174 PF00849 RNA pseudouridylate synthase RB3174 PF01479 S4 domain RB3176 PF00155 Aminotransferase class I and II RB3177 PF00884 Sulfatase RB3179 PF03176 MMPL family RB318 PF00550 Phosphopantetheine attachment site RB3185 PF03176 MMPL family RB3193 PF00923 Transaldolase RB3195 PF03572 Peptidase family S41 RB3195 PF13180 PDZ domain RB320 PF00109 Beta-ketoacyl synthase, N-terminal domain RB320 PF02801 Beta-ketoacyl synthase, C-terminal domain RB3208 PF03994 RB3208 RB321 PF00072 Response regulator receiver domain RB321 PF00196 Bacterial regulatory proteins, luxR family RB3213 PF13785 RB3213 RB3217 PF02675 S-adenosylmethionine decarboxylase RB322 PF13437 HlyD family secretion protein RB322 PF13533 Biotin-lipoyl like RB3221 PF13421 RB3221 RB3221 PF14237 RB3221 RB3228 PF07624 RB3228 RB3228 PF07626 RB3228 RB3228 PF07627 RB3228 RB3228 PF07631 RB3228 RB3228 PF07635 RB3228 RB3228 PF07637 RB3228 RB3232 PF07586 RB3232 RB3234 PF08450 SMP-30/Gluconolaconase/LRE-like region RB3236 PF00939 Sodium:sulfate symporter transmembrane region RB3237 PF05025 RbsD / FucU transport protein family RB3239 PF01261 Xylose isomerase-like TIM barrel RB3239 PF07582 AP endonuclease family 2 C terminus RB3240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RB3242 PF03372 Endonuclease/Exonuclease/phosphatase family RB3245 PF13672 Protein phosphatase 2C RB3248 PF01627 Hpt domain RB3251 PF00072 Response regulator receiver domain RB3251 PF00563 EAL domain RB3251 PF00990 GGDEF domain RB3251 PF08447 PAS fold RB3252 PF12679 RB3252 RB3253 PF00005 ABC transporter RB3255 PF01960 ArgJ family RB3256 PF14101 RB3256 RB3259 PF07927 YcfA-like protein RB3265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB3266 PF00849 RNA pseudouridylate synthase RB3266 PF01479 S4 domain RB3271 PF00069 Protein kinase domain RB3272 PF01751 Toprim domain RB328 PF00156 Phosphoribosyl transferase domain RB3281 PF00216 Bacterial DNA-binding protein RB3283 PF03692 RB3283 RB3287 PF00005 ABC transporter RB3287 PF02405 RB3287 RB3292 PF00202 Aminotransferase class-III RB3299 PF07596 RB3299 RB3299 PF13633 Prokaryotic N-terminal methylation site RB3305 PF01435 Peptidase family M48 RB3309 PF00884 Sulfatase RB3312 PF02558 Ketopantoate reductase PanE/ApbA RB3312 PF08546 Ketopantoate reductase PanE/ApbA C terminal RB3313 PF00575 S1 RNA binding domain RB3313 PF09371 Tex-like protein N-terminal domain RB3313 PF12836 Helix-hairpin-helix motif RB3313 PF16921 RB3313 RB3314 PF01434 Peptidase family M41 RB3317 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB3320 PF06742 Protein of unknown function (DUF1214) RB3320 PF06863 Protein of unknown function (DUF1254) RB3321 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RB3322 PF00034 Cytochrome c RB3330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB3338 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB334 PF00122 E1-E2 ATPase RB334 PF00702 haloacid dehalogenase-like hydrolase RB334 PF04945 YHS domain RB3340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RB3342 PF02585 GlcNAc-PI de-N-acetylase RB3345 PF12833 Helix-turn-helix domain RB3348 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) RB3349 PF00474 Sodium:solute symporter family RB3349 PF13415 Galactose oxidase, central domain RB3352 PF00701 Dihydrodipicolinate synthetase family RB3353 PF13088 BNR repeat-like domain RB3355 PF03150 Di-haem cytochrome c peroxidase RB336 PF01797 Transposase IS200 like RB3363 PF00196 Bacterial regulatory proteins, luxR family RB3363 PF00989 PAS fold RB3363 PF13426 PAS domain RB3367 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RB3371 PF04072 Leucine carboxyl methyltransferase RB3371 PF09500 Putative thioesterase (yiiD_Cterm) RB3373 PF00069 Protein kinase domain RB3373 PF00072 Response regulator receiver domain RB3373 PF00512 His Kinase A (phospho-acceptor) domain RB3373 PF01627 Hpt domain RB3373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB3373 PF13191 AAA ATPase domain RB3376 PF13435 Cytochrome c554 and c-prime RB3379 PF07593 RB3379 RB3379 PF13432 Tetratricopeptide repeat RB3379 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB3382 PF07593 RB3382 RB3382 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB3388 PF07593 RB3388 RB3388 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB339 PF01910 Domain of unknown function DUF77 RB3395 PF07596 RB3395 RB3395 PF13633 Prokaryotic N-terminal methylation site RB3400 PF07596 RB3400 RB3400 PF13633 Prokaryotic N-terminal methylation site RB3403 PF00884 Sulfatase RB3405 PF00703 Glycosyl hydrolases family 2 RB3405 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RB3405 PF02837 Glycosyl hydrolases family 2, sugar binding domain RB3410 PF08907 RB3410 RB3413 PF07859 alpha/beta hydrolase fold RB3413 PF13202 EF hand RB3417 PF09492 Pectic acid lyase RB3418 PF08002 Protein of unknown function (DUF1697) RB342 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RB3423 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RB3423 PF00364 Biotin-requiring enzyme RB3423 PF02817 e3 binding domain RB3424 PF00456 Transketolase, thiamine diphosphate binding domain RB343 PF13472 GDSL-like Lipase/Acylhydrolase family RB3430 PF01027 Inhibitor of apoptosis-promoting Bax1 RB3431 PF02190 ATP-dependent protease La (LON) domain RB3433 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RB3435 PF14257 RB3435 RB344 PF12831 FAD dependent oxidoreductase RB3440 PF07607 RB3440 RB3442 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB3446 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RB3451 PF02542 YgbB family RB3453 PF02465 RB3453 RB3453 PF07195 RB3453 RB3465 PF00521 DNA gyrase/topoisomerase IV, subunit A RB3465 PF03989 DNA gyrase C-terminal domain, beta-propeller RB3466 PF00204 DNA gyrase B RB3466 PF00986 DNA gyrase B subunit, carboxyl terminus RB3466 PF01751 Toprim domain RB3466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB3467 PF07629 RB3467 RB3468 PF01548 RB3468 RB3468 PF02371 RB3468 RB3471 PF01202 Shikimate kinase RB3476 PF02457 DisA bacterial checkpoint controller nucleotide-binding RB3478 PF00557 Metallopeptidase family M24 RB3479 PF03958 Bacterial type II/III secretion system short domain RB348 PF00884 Sulfatase RB3482 PF00437 Type II/IV secretion system protein RB3482 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RB3484 PF00482 Type II secretion system (T2SS), protein F RB3487 PF12833 Helix-turn-helix domain RB3488 PF00107 Zinc-binding dehydrogenase RB3488 PF08240 Alcohol dehydrogenase GroES-like domain RB3491 PF05025 RbsD / FucU transport protein family RB3493 PF13407 Periplasmic binding protein domain RB3495 PF10054 Predicted periplasmic lipoprotein (DUF2291) RB3496 PF00005 ABC transporter RB3497 PF02653 RB3497 RB3499 PF00294 pfkB family carbohydrate kinase RB3500 PF07632 Protein of unknown function (DUF1593) RB3501 PF07632 Protein of unknown function (DUF1593) RB3504 PF07632 Protein of unknown function (DUF1593) RB3505 PF07625 RB3505 RB3508 PF01370 NAD dependent epimerase/dehydratase family RB3509 PF06283 Trehalose utilisation RB3513 PF07632 Protein of unknown function (DUF1593) RB3514 PF07632 Protein of unknown function (DUF1593) RB352 PF00884 Sulfatase RB3521 PF01022 Bacterial regulatory protein, arsR family RB3524 PF08479 POTRA domain, ShlB-type RB3527 PF05860 haemagglutination activity domain RB3527 PF12951 RB3527 RB3532 PF00149 Calcineurin-like phosphoesterase RB3534 PF07593 RB3534 RB3534 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB3542 PF07596 RB3542 RB3542 PF13633 Prokaryotic N-terminal methylation site RB3549 PF02311 AraC-like ligand binding domain RB3549 PF12833 Helix-turn-helix domain RB3550 PF01738 Dienelactone hydrolase family RB3550 PF07859 alpha/beta hydrolase fold RB3555 PF00480 ROK family RB3556 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RB3556 PF02585 GlcNAc-PI de-N-acetylase RB356 PF13557 RB356 RB3569 PF13366 RB3569 RB357 PF08241 Methyltransferase domain RB3571 PF07619 RB3571 RB3571 PF07622 RB3571 RB3571 PF07676 WD40-like Beta Propeller Repeat RB3579 PF03403 Platelet-activating factor acetylhydrolase, isoform II RB3584 PF00999 Sodium/hydrogen exchanger family RB3584 PF02254 TrkA-N domain RB3589 PF02706 Chain length determinant protein RB3591 PF00534 Glycosyl transferases group 1 RB3591 PF13439 Glycosyltransferase Family 4 RB3593 PF01522 Polysaccharide deacetylase RB3596 PF01592 NifU-like N terminal domain RB3597 PF00266 Aminotransferase class-V RB3598 PF02601 RB3598 RB3598 PF13742 RB3598 RB3599 PF01344 Kelch motif RB3599 PF13964 Kelch motif RB360 PF11899 RB360 RB3601 PF08787 Alginate lyase RB3603 PF07676 WD40-like Beta Propeller Repeat RB3605 PF00072 Response regulator receiver domain RB3605 PF00563 EAL domain RB3605 PF00990 GGDEF domain RB3606 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB3606 PF13426 PAS domain RB3612 PF04982 RB3612 RB3614 PF00072 Response regulator receiver domain RB3614 PF00158 Sigma-54 interaction domain RB3615 PF00512 His Kinase A (phospho-acceptor) domain RB3615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB3615 PF08447 PAS fold RB362 PF12850 Calcineurin-like phosphoesterase superfamily domain RB3622 PF06965 Na+/H+ antiporter 1 RB3625 PF11845 RB3625 RB3627 PF01841 Transglutaminase-like superfamily RB3630 PF02627 Carboxymuconolactone decarboxylase family RB3632 PF00106 short chain dehydrogenase RB3635 PF06439 Domain of Unknown Function (DUF1080) RB3639 PF13472 GDSL-like Lipase/Acylhydrolase family RB3641 PF10282 Lactonase, 7-bladed beta-propeller RB3648 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB365 PF13372 Alginate export RB3653 PF02311 AraC-like ligand binding domain RB3653 PF12833 Helix-turn-helix domain RB3656 PF04199 Putative cyclase RB3657 PF13561 Enoyl-(Acyl carrier protein) reductase RB3670 PF00665 Integrase core domain RB3675 PF03983 SLA1 homology domain 1, SHD1 RB3678 PF02424 ApbE family RB3680 PF02082 Transcriptional regulator RB3681 PF13649 Methyltransferase domain RB3686 PF08240 Alcohol dehydrogenase GroES-like domain RB3686 PF13602 Zinc-binding dehydrogenase RB3689 PF00857 Isochorismatase family RB3692 PF12833 Helix-turn-helix domain RB3694 PF00561 alpha/beta hydrolase fold RB3696 PF04657 RB3696 RB3698 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RB370 PF13379 NMT1-like family RB3700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RB3702 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RB3703 PF03466 LysR substrate binding domain RB3706 PF02424 ApbE family RB3708 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RB3708 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RB3710 PF00795 Carbon-nitrogen hydrolase RB3714 PF00109 Beta-ketoacyl synthase, N-terminal domain RB3714 PF02801 Beta-ketoacyl synthase, C-terminal domain RB3716 PF02566 OsmC-like protein RB3718 PF07690 Major Facilitator Superfamily RB372 PF00528 Binding-protein-dependent transport system inner membrane component RB3727 PF00140 Sigma-70 factor, region 1 RB3727 PF04539 Sigma-70 region 3 RB3727 PF04542 Sigma-70 region 2 RB3727 PF04545 Sigma-70, region 4 RB3729 PF00005 ABC transporter RB3729 PF00027 Cyclic nucleotide-binding domain RB373 PF00005 ABC transporter RB3730 PF16576 RB3730 RB3732 PF02687 RB3732 RB3733 PF16363 RB3733 RB3735 PF02569 Pantoate-beta-alanine ligase RB3739 PF02577 Bifunctional nuclease RB374 PF00005 ABC transporter RB3742 PF00669 Bacterial flagellin N-terminal helical region RB3742 PF00700 Bacterial flagellin C-terminal helical region RB3742 PF07196 Flagellin hook IN motif RB3750 PF02561 Flagellar protein FliS RB3751 PF01370 NAD dependent epimerase/dehydratase family RB3755 PF00884 Sulfatase RB3755 PF16347 RB3755 RB3762 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RB3762 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RB3763 PF01266 FAD dependent oxidoreductase RB3763 PF16901 RB3763 RB3764 PF07632 Protein of unknown function (DUF1593) RB3767 PF00180 Isocitrate/isopropylmalate dehydrogenase RB3768 PF07690 Major Facilitator Superfamily RB377 PF04976 RB377 RB377 PF13247 4Fe-4S dicluster domain RB3770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB3771 PF04199 Putative cyclase RB3773 PF07005 Protein of unknown function, DUF1537 RB3773 PF17042 RB3773 RB3774 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RB3779 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB3779 PF03924 CHASE domain RB3779 PF08447 PAS fold RB3779 PF13426 PAS domain RB378 PF00384 Molybdopterin oxidoreductase RB378 PF01568 Molydopterin dinucleotide binding domain RB378 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RB3784 PF00072 Response regulator receiver domain RB3786 PF12679 RB3786 RB3788 PF00005 ABC transporter RB379 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RB379 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RB3792 PF00512 His Kinase A (phospho-acceptor) domain RB3792 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB3794 PF01580 FtsK/SpoIIIE family RB380 PF00175 Oxidoreductase NAD-binding domain RB380 PF00667 FAD binding domain RB3804 PF07583 RB3804 RB3804 PF07587 RB3804 RB3804 PF07635 RB3804 RB3804 PF13385 Concanavalin A-like lectin/glucanases superfamily RB3808 PF07394 RB3808 RB3815 PF01436 NHL repeat RB3816 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RB3816 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RB3817 PF03062 RB3817 RB382 PF07590 RB382 RB3820 PF01066 CDP-alcohol phosphatidyltransferase RB3822 PF02666 RB3822 RB3824 PF00890 FAD binding domain RB3824 PF02910 Fumarate reductase flavoprotein C-term RB3826 PF07396 Phosphate-selective porin O and P RB3830 PF13472 GDSL-like Lipase/Acylhydrolase family RB384 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family RB3840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RB3842 PF00326 Prolyl oligopeptidase family RB3842 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region RB3849 PF00884 Sulfatase RB3854 PF10000 ACT domain RB386 PF00155 Aminotransferase class I and II RB386 PF00501 AMP-binding enzyme RB386 PF00550 Phosphopantetheine attachment site RB3865 PF13302 Acetyltransferase (GNAT) domain RB3867 PF03372 Endonuclease/Exonuclease/phosphatase family RB3871 PF01609 Transposase DDE domain RB3876 PF00884 Sulfatase RB3877 PF00884 Sulfatase RB3877 PF14707 C-terminal region of aryl-sulfatase RB3884 PF00696 Amino acid kinase family RB3886 PF01765 Ribosome recycling factor RB3891 PF03807 NADP oxidoreductase coenzyme F420-dependent RB3891 PF14748 Pyrroline-5-carboxylate reductase dimerisation RB3893 PF00069 Protein kinase domain RB3895 PF12799 Leucine Rich repeats (2 copies) RB3898 PF01470 Pyroglutamyl peptidase RB39 PF00665 Integrase core domain RB390 PF01494 FAD binding domain RB3906 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) RB3908 PF01894 Uncharacterised protein family UPF0047 RB3913 PF01136 RB3913 RB3913 PF12392 RB3913 RB3915 PF03167 Uracil DNA glycosylase superfamily RB3915 PF13566 RB3915 RB3916 PF01566 RB3916 RB3919 PF00034 Cytochrome c RB3919 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB392 PF13419 Haloacid dehalogenase-like hydrolase RB3924 PF08450 SMP-30/Gluconolaconase/LRE-like region RB3926 PF14357 RB3926 RB3932 PF01618 RB3932 RB3933 PF02472 Biopolymer transport protein ExbD/TolR RB3934 PF02472 Biopolymer transport protein ExbD/TolR RB3936 PF00117 Glutamine amidotransferase class-I RB3938 PF04289 Protein of unknown function (DUF447) RB3940 PF08544 GHMP kinases C terminal RB3942 PF00588 SpoU rRNA Methylase family RB3944 PF06439 Domain of Unknown Function (DUF1080) RB3946 PF03942 RB3946 RB395 PF07624 RB395 RB395 PF07626 RB395 RB395 PF07627 RB395 RB395 PF07631 RB395 RB395 PF07635 RB395 RB395 PF07637 RB395 RB3950 PF16841 RB3950 RB3950 PF17164 RB3950 RB3953 PF00034 Cytochrome c RB3956 PF00884 Sulfatase RB3959 PF03061 Thioesterase superfamily RB3960 PF02080 TrkA-C domain RB3960 PF03600 Citrate transporter RB3966 PF11755 RB3966 RB3967 PF00474 Sodium:solute symporter family RB3971 PF16227 RB3971 RB398 PF07586 RB398 RB3981 PF09346 SMI1 / KNR4 family (SUKH-1) RB399 PF00342 Phosphoglucose isomerase RB3995 PF07590 RB3995 RB3997 PF04986 RB3997 RB3997 PF14319 RB3997 RB3999 PF00589 Phage integrase family RB3999 PF13495 Phage integrase, N-terminal SAM-like domain RB40 PF14300 Domain of unknown function (DUF4375) RB4008 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB4011 PF00578 AhpC/TSA family RB4013 PF00270 DEAD/DEAH box helicase RB4013 PF00271 Helicase conserved C-terminal domain RB4013 PF04408 Helicase associated domain (HA2) RB4013 PF08482 RB4013 RB4015 PF06439 Domain of Unknown Function (DUF1080) RB4017 PF00884 Sulfatase RB4022 PF02230 Phospholipase/Carboxylesterase RB4024 PF00756 Putative esterase RB4029 PF05016 Plasmid stabilisation system protein RB4031 PF00069 Protein kinase domain RB4032 PF07394 RB4032 RB4041 PF01261 Xylose isomerase-like TIM barrel RB4043 PF13562 RB4043 RB4053 PF00092 von Willebrand factor type A domain RB4053 PF13400 RB4053 RB4059 PF07811 RB4059 RB406 PF00884 Sulfatase RB406 PF16347 RB406 RB4060 PF07811 RB4060 RB4061 PF01478 Type IV leader peptidase family RB4069 PF04055 Radical SAM superfamily RB4069 PF06463 Molybdenum Cofactor Synthesis C RB4069 PF13353 4Fe-4S single cluster domain RB4071 PF01944 RB4071 RB4077 PF13559 RB4077 RB4081 PF07726 ATPase family associated with various cellular activities (AAA) RB4087 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RB409 PF00884 Sulfatase RB409 PF16385 RB409 RB4091 PF01609 Transposase DDE domain RB4091 PF13808 RB4091 RB4097 PF01381 Helix-turn-helix RB4097 PF13676 TIR domain RB410 PF00591 Glycosyl transferase family, a/b domain RB410 PF02885 Glycosyl transferase family, helical bundle domain RB4105 PF04002 RadC-like JAB domain RB4106 PF08357 SEFIR domain RB4108 PF05099 Tellurite resistance protein TerB RB4113 PF01609 Transposase DDE domain RB4113 PF13808 RB4113 RB4114 PF07621 RB4114 RB4115 PF00174 Oxidoreductase molybdopterin binding domain RB4115 PF00805 Pentapeptide repeats (8 copies) RB4116 PF05569 BlaR1 peptidase M56 RB4118 PF03965 Penicillinase repressor RB4123 PF07883 Cupin domain RB4127 PF03372 Endonuclease/Exonuclease/phosphatase family RB4129 PF16257 RB4129 RB4131 PF00107 Zinc-binding dehydrogenase RB4131 PF08240 Alcohol dehydrogenase GroES-like domain RB4136 PF00072 Response regulator receiver domain RB4137 PF00512 His Kinase A (phospho-acceptor) domain RB4137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB4143 PF01425 Amidase RB4149 PF07636 RB4149 RB4151 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RB4156 PF02621 Menaquinone biosynthesis RB4160 PF04055 Radical SAM superfamily RB4161 PF02446 4-alpha-glucanotransferase RB4165 PF04542 Sigma-70 region 2 RB4165 PF08281 Sigma-70, region 4 RB4167 PF00034 Cytochrome c RB4167 PF07995 Glucose / Sorbosone dehydrogenase RB417 PF01156 Inosine-uridine preferring nucleoside hydrolase RB4173 PF00448 SRP54-type protein, GTPase domain RB4174 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) RB4179 PF00158 Sigma-54 interaction domain RB4179 PF00498 FHA domain RB4179 PF02954 Bacterial regulatory protein, Fis family RB418 PF00892 EamA-like transporter family RB4182 PF07643 RB4182 RB4186 PF00069 Protein kinase domain RB4186 PF13191 AAA ATPase domain RB419 PF00069 Protein kinase domain RB4201 PF08867 RB4201 RB4215 PF00239 Resolvase, N terminal domain RB4216 PF07618 RB4216 RB422 PF00459 Inositol monophosphatase family RB4223 PF02586 Uncharacterised ACR, COG2135 RB4224 PF00817 impB/mucB/samB family RB4224 PF11798 IMS family HHH motif RB4224 PF11799 impB/mucB/samB family C-terminal domain RB4229 PF03781 Sulfatase-modifying factor enzyme 1 RB4229 PF12867 DinB superfamily RB423 PF01613 Flavin reductase like domain RB4230 PF10017 RB4230 RB4233 PF07583 RB4233 RB4233 PF07587 RB4233 RB4233 PF07635 RB4233 RB4239 PF04773 FecR protein RB4239 PF13385 Concanavalin A-like lectin/glucanases superfamily RB4241 PF04542 Sigma-70 region 2 RB4241 PF08281 Sigma-70, region 4 RB4245 PF06713 RB4245 RB4247 PF00270 DEAD/DEAH box helicase RB4247 PF00271 Helicase conserved C-terminal domain RB4247 PF04408 Helicase associated domain (HA2) RB4247 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RB4247 PF11898 RB4247 RB4248 PF09335 RB4248 RB426 PF07583 RB426 RB426 PF07587 RB426 RB426 PF07635 RB426 RB4260 PF06271 RB4260 RB4267 PF00194 Eukaryotic-type carbonic anhydrase RB4270 PF01223 DNA/RNA non-specific endonuclease RB4270 PF13365 Trypsin-like peptidase domain RB4273 PF04261 Dyp-type peroxidase family RB4278 PF12902 Ferritin-like RB4278 PF14870 Photosynthesis system II assembly factor YCF48 RB4282 PF13582 Metallo-peptidase family M12B Reprolysin-like RB4286 PF01738 Dienelactone hydrolase family RB4288 PF01494 FAD binding domain RB4292 PF07995 Glucose / Sorbosone dehydrogenase RB4292 PF12902 Ferritin-like RB4293 PF03098 Animal haem peroxidase RB4294 PF00112 Papain family cysteine protease RB4299 PF01527 Transposase RB430 PF07394 RB430 RB4300 PF00665 Integrase core domain RB4300 PF13276 RB4300 RB4303 PF03050 RB4303 RB4305 PF02687 RB4305 RB4305 PF12704 MacB-like periplasmic core domain RB4308 PF07625 RB4308 RB4309 PF00005 ABC transporter RB4310 PF13437 HlyD family secretion protein RB4310 PF13533 Biotin-lipoyl like RB4314 PF02687 RB4314 RB4314 PF12704 MacB-like periplasmic core domain RB4317 PF00403 Heavy-metal-associated domain RB4325 PF07644 RB4325 RB4327 PF01554 MatE RB4333 PF00534 Glycosyl transferases group 1 RB4333 PF13439 Glycosyltransferase Family 4 RB4337 PF00535 Glycosyl transferase family 2 RB4337 PF02709 N-terminal domain of galactosyltransferase RB4340 PF07592 RB4340 RB4347 PF09537 Domain of unknown function (DUF2383) RB4366 PF01661 Macro domain RB437 PF00589 Phage integrase family RB4375 PF00404 Dockerin type I repeat RB4376 PF00199 Catalase RB4376 PF06628 Catalase-related immune-responsive RB4377 PF01594 RB4377 RB4382 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RB4383 PF13454 FAD-NAD(P)-binding RB4386 PF00291 Pyridoxal-phosphate dependent enzyme RB4393 PF07640 RB4393 RB4394 PF01965 DJ-1/PfpI family RB4395 PF02627 Carboxymuconolactone decarboxylase family RB4396 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RB4396 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB4397 PF07597 RB4397 RB4399 PF08240 Alcohol dehydrogenase GroES-like domain RB4399 PF13602 Zinc-binding dehydrogenase RB44 PF09346 SMI1 / KNR4 family (SUKH-1) RB4404 PF13561 Enoyl-(Acyl carrier protein) reductase RB4405 PF11338 RB4405 RB4408 PF00034 Cytochrome c RB4408 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB4410 PF09678 RB4410 RB4416 PF00115 Cytochrome C and Quinol oxidase polypeptide I RB4417 PF00034 Cytochrome c RB4417 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RB4419 PF02308 RB4419 RB4420 PF09335 RB4420 RB4422 PF00072 Response regulator receiver domain RB4423 PF14437 RB4423 RB4426 PF13248 RB4426 RB4429 PF11160 RB4429 RB443 PF07618 RB443 RB4432 PF13561 Enoyl-(Acyl carrier protein) reductase RB4433 PF00210 Ferritin-like domain RB4436 PF04226 RB4436 RB4438 PF16242 RB4438 RB4440 PF04909 Amidohydrolase RB4444 PF13229 Right handed beta helix region RB4454 PF00669 Bacterial flagellin N-terminal helical region RB4454 PF00700 Bacterial flagellin C-terminal helical region RB4454 PF07196 Flagellin hook IN motif RB4455 PF07623 RB4455 RB4458 PF01594 RB4458 RB4459 PF00924 Mechanosensitive ion channel RB4459 PF04972 BON domain RB4460 PF10011 Predicted membrane protein (DUF2254) RB4461 PF00924 Mechanosensitive ion channel RB4461 PF04972 BON domain RB4467 PF12146 Putative lysophospholipase RB4474 PF05532 CsbD-like RB4478 PF07332 RB4478 RB448 PF00149 Calcineurin-like phosphoesterase RB4484 PF01546 Peptidase family M20/M25/M40 RB4484 PF07687 Peptidase dimerisation domain RB4485 PF04107 Glutamate-cysteine ligase family 2(GCS2) RB4487 PF00072 Response regulator receiver domain RB4487 PF00158 Sigma-54 interaction domain RB4487 PF02954 Bacterial regulatory protein, Fis family RB4502 PF01679 RB4502 RB4504 PF04239 Protein of unknown function (DUF421) RB4505 PF03372 Endonuclease/Exonuclease/phosphatase family RB4508 PF00072 Response regulator receiver domain RB451 PF12728 Helix-turn-helix domain RB4511 PF00072 Response regulator receiver domain RB4511 PF00512 His Kinase A (phospho-acceptor) domain RB4511 PF00989 PAS fold RB4511 PF01339 CheB methylesterase RB4511 PF01739 CheR methyltransferase, SAM binding domain RB4511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB4511 PF03705 CheR methyltransferase, all-alpha domain RB4511 PF13426 PAS domain RB4511 PF13596 PAS domain RB4512 PF09949 RB4512 RB4513 PF03631 RB4513 RB4514 PF04542 Sigma-70 region 2 RB4517 PF01329 Pterin 4 alpha carbinolamine dehydratase RB452 PF04465 RB452 RB452 PF13287 RB452 RB4527 PF00109 Beta-ketoacyl synthase, N-terminal domain RB4527 PF02801 Beta-ketoacyl synthase, C-terminal domain RB453 PF12635 RB453 RB4530 PF00873 AcrB/AcrD/AcrF family RB4532 PF13437 HlyD family secretion protein RB4532 PF16576 RB4532 RB454 PF06634 RB454 RB4540 PF02321 Outer membrane efflux protein RB4544 PF14343 RB4544 RB4547 PF13606 Ankyrin repeat RB4556 PF07596 RB4556 RB4556 PF13633 Prokaryotic N-terminal methylation site RB4561 PF00728 Glycosyl hydrolase family 20, catalytic domain RB4561 PF00754 F5/8 type C domain RB4561 PF02838 Glycosyl hydrolase family 20, domain 2 RB4561 PF13290 RB4561 RB4564 PF00474 Sodium:solute symporter family RB4567 PF13419 Haloacid dehalogenase-like hydrolase RB457 PF13304 AAA domain RB4571 PF00440 Bacterial regulatory proteins, tetR family RB4575 PF07589 RB4575 RB4575 PF14717 Domain of unknown function (DUF4465) RB4577 PF00733 Asparagine synthase RB4577 PF13537 Glutamine amidotransferase domain RB4578 PF00571 CBS domain RB4578 PF03471 Transporter associated domain RB4579 PF02130 Uncharacterized protein family UPF0054 RB4580 PF01966 HD domain RB4580 PF07697 RB4580 RB4580 PF07698 RB4580 RB4582 PF02562 PhoH-like protein RB4583 PF01148 Cytidylyltransferase family RB4586 PF08534 Redoxin RB459 PF14103 RB459 RB4591 PF02565 Recombination protein O C terminal RB4591 PF11967 Recombination protein O N terminal RB4593 PF13174 Tetratricopeptide repeat RB4595 PF04390 Lipopolysaccharide-assembly RB4597 PF03547 RB4597 RB4598 PF14559 Tetratricopeptide repeat RB46 PF13365 Trypsin-like peptidase domain RB460 PF00176 SNF2 family N-terminal domain RB460 PF00271 Helicase conserved C-terminal domain RB460 PF13091 PLD-like domain RB4601 PF07596 RB4601 RB4605 PF00701 Dihydrodipicolinate synthetase family RB4606 PF13899 Thioredoxin-like RB461 PF04326 Divergent AAA domain RB4610 PF01330 RuvA N terminal domain RB4610 PF14520 Helix-hairpin-helix domain RB4611 PF01029 NusB family RB4613 PF01521 Iron-sulphur cluster biosynthesis RB4619 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB4619 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RB4621 PF06283 Trehalose utilisation RB4621 PF07995 Glucose / Sorbosone dehydrogenase RB4621 PF08305 NPCBM/NEW2 domain RB4629 PF06865 Protein of unknown function (DUF1255) RB4631 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RB4632 PF02699 Preprotein translocase subunit RB4633 PF02355 Protein export membrane protein RB4633 PF07549 SecD/SecF GG Motif RB4638 PF00884 Sulfatase RB4638 PF16347 RB4638 RB4642 PF09720 RB4642 RB4646 PF00510 Cytochrome c oxidase subunit III RB4650 PF04102 SlyX RB4651 PF05690 Thiazole biosynthesis protein ThiG RB4653 PF02597 ThiS family RB4654 PF01261 Xylose isomerase-like TIM barrel RB4654 PF07582 AP endonuclease family 2 C terminus RB4658 PF00571 CBS domain RB4667 PF13360 PQQ-like domain RB4673 PF02075 Crossover junction endodeoxyribonuclease RuvC RB4675 PF01406 tRNA synthetases class I (C) catalytic domain RB4675 PF09190 DALR domain RB4681 PF00313 'Cold-shock' DNA-binding domain RB4694 PF07596 RB4694 RB4694 PF13633 Prokaryotic N-terminal methylation site RB470 PF00665 Integrase core domain RB4702 PF07859 alpha/beta hydrolase fold RB4703 PF12779 RB4703 RB4707 PF06439 Domain of Unknown Function (DUF1080) RB4711 PF07681 RB4711 RB4712 PF13569 RB4712 RB4714 PF07728 AAA domain (dynein-related subfamily) RB4715 PF05762 VWA domain containing CoxE-like protein RB4721 PF01936 NYN domain RB4721 PF12872 OST-HTH/LOTUS domain RB4724 PF00440 Bacterial regulatory proteins, tetR family RB4725 PF00106 short chain dehydrogenase RB4728 PF00069 Protein kinase domain RB4730 PF06848 RB4730 RB4732 PF13671 AAA domain RB4737 PF01791 DeoC/LacD family aldolase RB4739 PF13671 AAA domain RB4742 PF00582 Universal stress protein family RB4744 PF00582 Universal stress protein family RB4749 PF14520 Helix-hairpin-helix domain RB4749 PF14716 Helix-hairpin-helix domain RB475 PF07619 RB475 RB475 PF07622 RB475 RB4752 PF01180 Dihydroorotate dehydrogenase RB4757 PF14357 RB4757 RB4758 PF00072 Response regulator receiver domain RB4758 PF00989 PAS fold RB4758 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB4759 PF00512 His Kinase A (phospho-acceptor) domain RB4759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB4759 PF13426 PAS domain RB4760 PF00072 Response regulator receiver domain RB4770 PF03109 RB4770 RB4775 PF00872 RB4775 RB4781 PF01521 Iron-sulphur cluster biosynthesis RB4784 PF00884 Sulfatase RB4787 PF00884 Sulfatase RB4788 PF12796 Ankyrin repeats (3 copies) RB479 PF07619 RB479 RB479 PF07622 RB479 RB4798 PF07081 Protein of unknown function (DUF1349) RB4799 PF10081 RB4799 RB4799 PF15420 RB4799 RB4803 PF07583 RB4803 RB4803 PF07587 RB4803 RB4803 PF07635 RB4803 RB4805 PF07394 RB4805 RB481 PF07619 RB481 RB481 PF07622 RB481 RB4811 PF01609 Transposase DDE domain RB4815 PF00884 Sulfatase RB4823 PF08695 RB4823 RB4826 PF03050 RB4826 RB4835 PF01694 Rhomboid family RB4839 PF07606 Protein of unknown function (DUF1569) RB4851 PF00884 Sulfatase RB4854 PF07586 RB4854 RB4856 PF07624 RB4856 RB4856 PF07626 RB4856 RB4856 PF07627 RB4856 RB4856 PF07631 RB4856 RB4856 PF07635 RB4856 RB4856 PF07637 RB4856 RB4858 PF04773 FecR protein RB4859 PF04542 Sigma-70 region 2 RB486 PF04542 Sigma-70 region 2 RB486 PF08281 Sigma-70, region 4 RB4862 PF05048 Periplasmic copper-binding protein (NosD) RB4862 PF12708 Pectate lyase superfamily protein RB4862 PF13229 Right handed beta helix region RB4864 PF02687 RB4864 RB4864 PF12704 MacB-like periplasmic core domain RB4866 PF00005 ABC transporter RB4867 PF01668 SmpB protein RB4868 PF04055 Radical SAM superfamily RB4869 PF02080 TrkA-C domain RB4869 PF06826 RB4869 RB4870 PF00873 AcrB/AcrD/AcrF family RB4872 PF13533 Biotin-lipoyl like RB4872 PF16576 RB4872 RB4873 PF00440 Bacterial regulatory proteins, tetR family RB4876 PF00487 RB4876 RB4877 PF00152 tRNA synthetases class II (D, K and N) RB4879 PF00230 Major intrinsic protein RB4879 PF13472 GDSL-like Lipase/Acylhydrolase family RB488 PF07583 RB488 RB488 PF07587 RB488 RB4880 PF00884 Sulfatase RB4880 PF16347 RB4880 RB4887 PF12724 Flavodoxin domain RB4891 PF00122 E1-E2 ATPase RB4891 PF00702 haloacid dehalogenase-like hydrolase RB4894 PF00128 Alpha amylase, catalytic domain RB4894 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RB490 PF07394 RB490 RB4903 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RB4903 PF09363 XFP C-terminal domain RB4903 PF09364 XFP N-terminal domain RB4904 PF00300 Histidine phosphatase superfamily (branch 1) RB4906 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RB4906 PF02874 ATP synthase alpha/beta family, beta-barrel domain RB4908 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RB4909 PF09527 RB4909 RB4910 PF12966 RB4910 RB4911 PF00119 ATP synthase A chain RB4913 PF00137 ATP synthase subunit C RB4915 PF00430 ATP synthase B/B' CF(0) RB4916 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RB4916 PF00306 ATP synthase alpha/beta chain, C terminal domain RB4916 PF02874 ATP synthase alpha/beta family, beta-barrel domain RB4917 PF00231 ATP synthase RB4919 PF02635 DsrE/DsrF-like family RB492 PF13202 EF hand RB4921 PF04893 RB4921 RB4923 PF00892 EamA-like transporter family RB4925 PF00035 Double-stranded RNA binding motif RB4925 PF14622 Ribonuclease-III-like RB4928 PF02225 PA domain RB4928 PF04389 Peptidase family M28 RB4928 PF13180 PDZ domain RB4931 PF03938 Outer membrane protein (OmpH-like) RB4934 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RB4936 PF00132 Bacterial transferase hexapeptide (six repeats) RB4936 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RB4937 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB4944 PF00311 Phosphoenolpyruvate carboxylase RB4945 PF04932 RB4945 RB4954 PF13899 Thioredoxin-like RB4958 PF00498 FHA domain RB4960 PF04055 Radical SAM superfamily RB4960 PF16199 RB4960 RB4961 PF14229 RB4961 RB4967 PF08279 HTH domain RB4967 PF13280 RB4967 RB4968 PF00561 alpha/beta hydrolase fold RB497 PF07726 ATPase family associated with various cellular activities (AAA) RB4971 PF14311 RB4971 RB498 PF01882 RB498 RB4981 PF00106 short chain dehydrogenase RB4982 PF13460 NADH(P)-binding RB4984 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RB4989 PF07596 RB4989 RB4989 PF13544 RB4989 RB4990 PF07596 RB4990 RB4990 PF13544 RB4990 RB4993 PF13472 GDSL-like Lipase/Acylhydrolase family RB4994 PF00512 His Kinase A (phospho-acceptor) domain RB4994 PF00672 HAMP domain RB4994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB4995 PF00885 6,7-dimethyl-8-ribityllumazine synthase RB4997 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RB4997 PF07497 Rho termination factor, RNA-binding domain RB4998 PF00730 HhH-GPD superfamily base excision DNA repair protein RB500 PF07584 RB500 RB500 PF13519 von Willebrand factor type A domain RB5003 PF00909 Ammonium Transporter Family RB5005 PF00543 Nitrogen regulatory protein P-II RB5007 PF03629 Domain of unknown function (DUF303) RB5008 PF00150 Cellulase (glycosyl hydrolase family 5) RB5015 PF00583 Acetyltransferase (GNAT) family RB5016 PF01755 RB5016 RB5025 PF00112 Papain family cysteine protease RB5028 PF00069 Protein kinase domain RB5028 PF03781 Sulfatase-modifying factor enzyme 1 RB5029 PF08241 Methyltransferase domain RB5031 PF06439 Domain of Unknown Function (DUF1080) RB5038 PF01575 MaoC like domain RB5039 PF00732 GMC oxidoreductase RB5039 PF05199 GMC oxidoreductase RB5042 PF00753 Metallo-beta-lactamase superfamily RB5043 PF03616 RB5043 RB5050 PF13522 Glutamine amidotransferase domain RB5051 PF13738 Pyridine nucleotide-disulphide oxidoreductase RB5053 PF01261 Xylose isomerase-like TIM barrel RB5055 PF00005 ABC transporter RB5055 PF12848 ABC transporter RB5055 PF16326 RB5055 RB5056 PF00005 ABC transporter RB5057 PF03703 RB5057 RB5060 PF03703 RB5060 RB5064 PF07624 RB5064 RB5064 PF07626 RB5064 RB5064 PF07627 RB5064 RB5064 PF07631 RB5064 RB5064 PF07635 RB5064 RB5064 PF07637 RB5064 RB5066 PF07586 RB5066 RB5071 PF07596 RB5071 RB5071 PF13544 RB5071 RB5078 PF04773 FecR protein RB5081 PF04542 Sigma-70 region 2 RB5081 PF08281 Sigma-70, region 4 RB5083 PF14358 RB5083 RB5084 PF12831 FAD dependent oxidoreductase RB5089 PF07596 RB5089 RB5089 PF13633 Prokaryotic N-terminal methylation site RB5097 PF00633 Helix-hairpin-helix motif RB5097 PF00730 HhH-GPD superfamily base excision DNA repair protein RB5098 PF00132 Bacterial transferase hexapeptide (six repeats) RB5111 PF00440 Bacterial regulatory proteins, tetR family RB5111 PF14246 AefR-like transcriptional repressor, C-terminal region RB5116 PF16576 RB5116 RB5117 PF00873 AcrB/AcrD/AcrF family RB5126 PF02119 RB5126 RB5126 PF13646 HEAT repeats RB5134 PF01725 Ham1 family RB5135 PF01242 6-pyruvoyl tetrahydropterin synthase RB5140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB5143 PF13088 BNR repeat-like domain RB5146 PF00884 Sulfatase RB5146 PF16385 RB5146 RB5147 PF07619 RB5147 RB5147 PF07622 RB5147 RB5151 PF00291 Pyridoxal-phosphate dependent enzyme RB5151 PF00585 C-terminal regulatory domain of Threonine dehydratase RB5152 PF00005 ABC transporter RB5152 PF12399 Branched-chain amino acid ATP-binding cassette transporter RB5154 PF00717 Peptidase S24-like RB5170 PF01478 Type IV leader peptidase family RB5172 PF08666 SAF domain RB5172 PF16976 RB5172 RB5174 PF00263 RB5174 RB5174 PF13629 RB5174 RB5175 PF00072 Response regulator receiver domain RB5175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RB5177 PF00795 Carbon-nitrogen hydrolase RB5178 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RB5178 PF03129 Anticodon binding domain RB5178 PF09180 Prolyl-tRNA synthetase, C-terminal RB5179 PF00117 Glutamine amidotransferase class-I RB5179 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RB5186 PF01926 50S ribosome-binding GTPase RB5186 PF06071 Protein of unknown function (DUF933) RB5189 PF07396 Phosphate-selective porin O and P RB5191 PF02547 Queuosine biosynthesis protein RB5195 PF00884 Sulfatase RB5196 PF00128 Alpha amylase, catalytic domain RB5196 PF16657 RB5196 RB5197 PF00534 Glycosyl transferases group 1 RB5197 PF05116 Sucrose-6F-phosphate phosphohydrolase RB5197 PF13439 Glycosyltransferase Family 4 RB5198 PF00294 pfkB family carbohydrate kinase RB5200 PF00128 Alpha amylase, catalytic domain RB5200 PF05116 Sucrose-6F-phosphate phosphohydrolase RB5205 PF00639 PPIC-type PPIASE domain RB5205 PF13624 SurA N-terminal domain RB5208 PF09825 RB5208 RB5211 PF08818 Domain of unknown function (DU1801) RB5213 PF09844 RB5213 RB522 PF12833 Helix-turn-helix domain RB522 PF13377 Periplasmic binding protein-like domain RB5226 PF03352 Methyladenine glycosylase RB5231 PF06108 Protein of unknown function (DUF952) RB524 PF00034 Cytochrome c RB524 PF06283 Trehalose utilisation RB5243 PF00326 Prolyl oligopeptidase family RB5245 PF03006 RB5245 RB5247 PF00400 WD domain, G-beta repeat RB5247 PF07635 RB5247 RB5253 PF07583 RB5253 RB5253 PF07587 RB5253 RB5255 PF07394 RB5255 RB5256 PF00150 Cellulase (glycosyl hydrolase family 5) RB5259 PF00176 SNF2 family N-terminal domain RB5259 PF00271 Helicase conserved C-terminal domain RB5263 PF00149 Calcineurin-like phosphoesterase RB5272 PF13360 PQQ-like domain RB5275 PF08448 PAS fold RB5275 PF12833 Helix-turn-helix domain RB5277 PF00701 Dihydrodipicolinate synthetase family RB5278 PF01266 FAD dependent oxidoreductase RB5281 PF00884 Sulfatase RB5282 PF00884 Sulfatase RB5285 PF06439 Domain of Unknown Function (DUF1080) RB5288 PF06439 Domain of Unknown Function (DUF1080) RB5290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB5290 PF10518 TAT (twin-arginine translocation) pathway signal sequence RB5294 PF00884 Sulfatase RB5294 PF16347 RB5294 RB5295 PF00884 Sulfatase RB5295 PF16347 RB5295 RB5300 PF14606 GDSL-like Lipase/Acylhydrolase family RB5300 PF14607 N-terminus of Esterase_SGNH_hydro-type RB5302 PF03729 RB5302 RB5304 PF04366 RB5304 RB5305 PF00884 Sulfatase RB5308 PF12833 Helix-turn-helix domain RB531 PF13343 Bacterial extracellular solute-binding protein RB5310 PF07632 Protein of unknown function (DUF1593) RB5313 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) RB5316 PF00544 Pectate lyase RB5319 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RB5320 PF00107 Zinc-binding dehydrogenase RB5320 PF08240 Alcohol dehydrogenase GroES-like domain RB5321 PF01261 Xylose isomerase-like TIM barrel RB5323 PF13472 GDSL-like Lipase/Acylhydrolase family RB5326 PF07583 RB5326 RB5326 PF07587 RB5326 RB5326 PF07635 RB5326 RB5328 PF07394 RB5328 RB5332 PF12850 Calcineurin-like phosphoesterase superfamily domain RB5334 PF04055 Radical SAM superfamily RB5336 PF00355 Rieske [2Fe-2S] domain RB5340 PF12705 PD-(D/E)XK nuclease superfamily RB5343 PF00580 UvrD/REP helicase N-terminal domain RB5343 PF13361 UvrD-like helicase C-terminal domain RB5346 PF01797 Transposase IS200 like RB5356 PF07596 RB5356 RB5356 PF13633 Prokaryotic N-terminal methylation site RB5359 PF10670 RB5359 RB536 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RB5363 PF00258 Flavodoxin RB5365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB5367 PF00239 Resolvase, N terminal domain RB5367 PF07508 Recombinase RB5367 PF13408 Recombinase zinc beta ribbon domain RB5370 PF07592 RB5370 RB5378 PF00884 Sulfatase RB5378 PF16347 RB5378 RB538 PF01261 Xylose isomerase-like TIM barrel RB5380 PF13360 PQQ-like domain RB5383 PF00884 Sulfatase RB539 PF00994 Probable molybdopterin binding domain RB5392 PF02153 Prephenate dehydrogenase RB5395 PF00586 AIR synthase related protein, N-terminal domain RB5395 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RB5395 PF02769 AIR synthase related protein, C-terminal domain RB5399 PF07596 RB5399 RB5399 PF13633 Prokaryotic N-terminal methylation site RB5405 PF01812 5-formyltetrahydrofolate cyclo-ligase family RB5406 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RB5406 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RB5414 PF00562 RNA polymerase Rpb2, domain 6 RB5414 PF04560 RNA polymerase Rpb2, domain 7 RB5414 PF04561 RNA polymerase Rpb2, domain 2 RB5414 PF04563 RNA polymerase beta subunit RB5414 PF04565 RNA polymerase Rpb2, domain 3 RB5414 PF10385 RNA polymerase beta subunit external 1 domain RB5416 PF00623 RNA polymerase Rpb1, domain 2 RB5416 PF04983 RNA polymerase Rpb1, domain 3 RB5416 PF04997 RNA polymerase Rpb1, domain 1 RB5416 PF04998 RNA polymerase Rpb1, domain 5 RB5416 PF05000 RNA polymerase Rpb1, domain 4 RB5417 PF00884 Sulfatase RB5420 PF04542 Sigma-70 region 2 RB5421 PF04773 FecR protein RB5421 PF13385 Concanavalin A-like lectin/glucanases superfamily RB5424 PF00884 Sulfatase RB5426 PF07583 RB5426 RB5426 PF07587 RB5426 RB5426 PF07635 RB5426 RB5428 PF07394 RB5428 RB5429 PF10142 PhoPQ-activated pathogenicity-related protein RB5432 PF01894 Uncharacterised protein family UPF0047 RB5434 PF00009 Elongation factor Tu GTP binding domain RB5434 PF00679 Elongation factor G C-terminus RB5434 PF03144 Elongation factor Tu domain 2 RB5434 PF03764 Elongation factor G, domain IV RB5434 PF14492 Elongation Factor G, domain II RB5437 PF01048 Phosphorylase superfamily RB5439 PF01493 GXGXG motif RB544 PF07583 RB544 RB544 PF07587 RB544 RB544 PF07635 RB544 RB5442 PF13768 von Willebrand factor type A domain RB5444 PF00438 S-adenosylmethionine synthetase, N-terminal domain RB5444 PF02772 S-adenosylmethionine synthetase, central domain RB5444 PF02773 S-adenosylmethionine synthetase, C-terminal domain RB5445 PF00149 Calcineurin-like phosphoesterase RB5451 PF07596 RB5451 RB5451 PF13633 Prokaryotic N-terminal methylation site RB546 PF07394 RB546 RB5465 PF00072 Response regulator receiver domain RB5465 PF00990 GGDEF domain RB5471 PF00072 Response regulator receiver domain RB5472 PF00072 Response regulator receiver domain RB5477 PF00072 Response regulator receiver domain RB5478 PF00072 Response regulator receiver domain RB5479 PF00072 Response regulator receiver domain RB5479 PF00512 His Kinase A (phospho-acceptor) domain RB5479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB548 PF00128 Alpha amylase, catalytic domain RB548 PF02806 Alpha amylase, C-terminal all-beta domain RB548 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RB5482 PF00072 Response regulator receiver domain RB5490 PF00873 AcrB/AcrD/AcrF family RB5495 PF13437 HlyD family secretion protein RB5495 PF13533 Biotin-lipoyl like RB5499 PF12708 Pectate lyase superfamily protein RB5500 PF01709 Transcriptional regulator RB5503 PF02033 Ribosome-binding factor A RB5504 PF00009 Elongation factor Tu GTP binding domain RB5504 PF04760 Translation initiation factor IF-2, N-terminal region RB5504 PF11987 Translation-initiation factor 2 RB5507 PF08529 NusA N-terminal domain RB5507 PF13184 NusA-like KH domain RB5507 PF14520 Helix-hairpin-helix domain RB5513 PF03934 Type II secretion system (T2SS), protein K RB5515 PF13633 Prokaryotic N-terminal methylation site RB5519 PF08334 Type II secretion system (T2SS), protein G RB5524 PF00404 Dockerin type I repeat RB5524 PF04151 Bacterial pre-peptidase C-terminal domain RB5524 PF07595 RB5524 RB5524 PF13229 Right handed beta helix region RB5540 PF02585 GlcNAc-PI de-N-acetylase RB5543 PF01588 Putative tRNA binding domain RB5543 PF08264 Anticodon-binding domain of tRNA RB5543 PF09334 tRNA synthetases class I (M) RB555 PF04542 Sigma-70 region 2 RB555 PF07719 Tetratricopeptide repeat RB555 PF08281 Sigma-70, region 4 RB5557 PF13360 PQQ-like domain RB5560 PF00290 Tryptophan synthase alpha chain RB5566 PF00004 ATPase family associated with various cellular activities (AAA) RB5566 PF01434 Peptidase family M41 RB5568 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RB5568 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal RB5568 PF13288 DXP reductoisomerase C-terminal domain RB5571 PF02163 Peptidase family M50 RB5573 PF00892 EamA-like transporter family RB5577 PF08450 SMP-30/Gluconolaconase/LRE-like region RB5581 PF03781 Sulfatase-modifying factor enzyme 1 RB5585 PF07638 ECF sigma factor RB5593 PF00069 Protein kinase domain RB560 PF03795 YCII-related domain RB5601 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RB5603 PF01634 ATP phosphoribosyltransferase RB5603 PF08029 HisG, C-terminal domain RB5606 PF00005 ABC transporter RB5608 PF06439 Domain of Unknown Function (DUF1080) RB5613 PF06224 RB5613 RB5616 PF05448 Acetyl xylan esterase (AXE1) RB5618 PF05154 RB5618 RB5619 PF01926 50S ribosome-binding GTPase RB5619 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RB562 PF07617 RB562 RB5620 PF03167 Uracil DNA glycosylase superfamily RB563 PF03795 YCII-related domain RB563 PF13474 SnoaL-like domain RB5630 PF13614 AAA domain RB5637 PF01261 Xylose isomerase-like TIM barrel RB5641 PF03553 RB5641 RB5642 PF01706 FliG C-terminal domain RB5642 PF14841 FliG middle domain RB5642 PF14842 FliG N-terminal domain RB5644 PF06439 Domain of Unknown Function (DUF1080) RB5645 PF07691 PA14 domain RB5645 PF13180 PDZ domain RB5645 PF13365 Trypsin-like peptidase domain RB5647 PF04055 Radical SAM superfamily RB5647 PF13282 RB5647 RB5653 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB5653 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RB5654 PF00310 Glutamine amidotransferases class-II RB5654 PF01493 GXGXG motif RB5654 PF01645 Conserved region in glutamate synthase RB5654 PF04898 Glutamate synthase central domain RB5655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RB5655 PF03466 LysR substrate binding domain RB5657 PF07876 Stress responsive A/B Barrel Domain RB566 PF06055 RB566 RB5660 PF07596 RB5660 RB5660 PF13633 Prokaryotic N-terminal methylation site RB5663 PF07607 RB5663 RB5670 PF00581 Rhodanese-like domain RB5671 PF00795 Carbon-nitrogen hydrolase RB5671 PF02540 NAD synthase RB5674 PF00149 Calcineurin-like phosphoesterase RB5675 PF02622 Uncharacterized ACR, COG1678 RB5678 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RB5678 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RB5681 PF05697 Bacterial trigger factor protein (TF) RB5681 PF05698 Bacterial trigger factor protein (TF) C-terminus RB5685 PF04476 RB5685 RB5689 PF00570 HRDC domain RB5689 PF01612 3'-5' exonuclease RB569 PF06439 Domain of Unknown Function (DUF1080) RB5691 PF13516 Leucine Rich repeat RB5694 PF13500 AAA domain RB5695 PF00795 Carbon-nitrogen hydrolase RB5696 PF00459 Inositol monophosphatase family RB5697 PF00578 AhpC/TSA family RB5699 PF09997 RB5699 RB5701 PF01565 FAD binding domain RB5701 PF02754 RB5701 RB5701 PF02913 FAD linked oxidases, C-terminal domain RB5701 PF13534 4Fe-4S dicluster domain RB5703 PF02597 ThiS family RB5705 PF02391 MoaE protein RB5708 PF02623 FliW protein RB5711 PF00669 Bacterial flagellin N-terminal helical region RB5711 PF00700 Bacterial flagellin C-terminal helical region RB5711 PF07196 Flagellin hook IN motif RB5715 PF05099 Tellurite resistance protein TerB RB5715 PF17032 RB5715 RB5716 PF02656 RB5716 RB5717 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RB5717 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB5720 PF00795 Carbon-nitrogen hydrolase RB5725 PF01138 3' exoribonuclease family, domain 1 RB5725 PF03725 3' exoribonuclease family, domain 2 RB5727 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB5730 PF00733 Asparagine synthase RB5731 PF00069 Protein kinase domain RB5738 PF01063 Aminotransferase class IV RB574 PF01841 Transglutaminase-like superfamily RB574 PF12969 Domain of Unknown Function with PDB structure (DUF3857) RB5740 PF00487 RB5740 RB5743 PF03486 HI0933-like protein RB5744 PF00211 Adenylate and Guanylate cyclase catalytic domain RB5747 PF00750 tRNA synthetases class I (R) RB5747 PF03485 Arginyl tRNA synthetase N terminal domain RB5747 PF05746 DALR anticodon binding domain RB5749 PF02410 Oligomerisation domain RB5753 PF00578 AhpC/TSA family RB5754 PF00012 Hsp70 protein RB5755 PF00012 Hsp70 protein RB5755 PF12531 RB5755 RB5756 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB5758 PF03741 RB5758 RB5761 PF01925 RB5761 RB5762 PF03819 MazG nucleotide pyrophosphohydrolase domain RB5763 PF01839 FG-GAP repeat RB5763 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB5766 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB5768 PF00924 Mechanosensitive ion channel RB5768 PF12794 RB5768 RB577 PF07595 RB577 RB5774 PF01139 tRNA-splicing ligase RtcB RB5776 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB5776 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RB5778 PF00245 Alkaline phosphatase RB5780 PF00072 Response regulator receiver domain RB5782 PF00085 Thioredoxin RB5782 PF13365 Trypsin-like peptidase domain RB5786 PF00515 Tetratricopeptide repeat RB5786 PF13432 Tetratricopeptide repeat RB5788 PF07639 RB5788 RB5795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RB5795 PF12728 Helix-turn-helix domain RB5801 PF00312 Ribosomal protein S15 RB5804 PF00013 KH domain RB5804 PF00575 S1 RNA binding domain RB5804 PF01138 3' exoribonuclease family, domain 1 RB5804 PF03725 3' exoribonuclease family, domain 2 RB5804 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RB5806 PF00034 Cytochrome c RB5811 PF06283 Trehalose utilisation RB5813 PF09423 PhoD-like phosphatase RB5813 PF16655 RB5813 RB5816 PF01120 Alpha-L-fucosidase RB5816 PF16757 RB5816 RB5820 PF00248 Aldo/keto reductase family RB5821 PF07690 Major Facilitator Superfamily RB5824 PF01926 50S ribosome-binding GTPase RB5825 PF01738 Dienelactone hydrolase family RB5826 PF03739 RB5826 RB5830 PF13091 PLD-like domain RB5830 PF13396 RB5830 RB5832 PF00251 Glycosyl hydrolases family 32 N-terminal domain RB5837 PF00717 Peptidase S24-like RB5841 PF00149 Calcineurin-like phosphoesterase RB5841 PF13385 Concanavalin A-like lectin/glucanases superfamily RB5846 PF00535 Glycosyl transferase family 2 RB5847 PF00156 Phosphoribosyl transferase domain RB5848 PF01258 Prokaryotic dksA/traR C4-type zinc finger RB5852 PF16697 RB5852 RB5856 PF00107 Zinc-binding dehydrogenase RB5856 PF08240 Alcohol dehydrogenase GroES-like domain RB5858 PF07883 Cupin domain RB5858 PF13560 Helix-turn-helix domain RB5861 PF01266 FAD dependent oxidoreductase RB5862 PF13419 Haloacid dehalogenase-like hydrolase RB5866 PF13546 RB5866 RB5869 PF08534 Redoxin RB5871 PF00004 ATPase family associated with various cellular activities (AAA) RB5876 PF00069 Protein kinase domain RB5876 PF13385 Concanavalin A-like lectin/glucanases superfamily RB588 PF07624 RB588 RB588 PF07626 RB588 RB588 PF07627 RB588 RB588 PF07631 RB588 RB588 PF07635 RB588 RB588 PF07637 RB588 RB5881 PF13744 Helix-turn-helix domain RB5884 PF02195 ParB-like nuclease domain RB5887 PF00665 Integrase core domain RB5887 PF13276 RB5887 RB5888 PF01527 Transposase RB5897 PF03190 Protein of unknown function, DUF255 RB5901 PF00092 von Willebrand factor type A domain RB5905 PF00149 Calcineurin-like phosphoesterase RB5913 PF12019 Type II transport protein GspH RB5915 PF13544 RB5915 RB5918 PF02237 Biotin protein ligase C terminal domain RB5918 PF03099 Biotin/lipoate A/B protein ligase family RB5920 PF00400 WD domain, G-beta repeat RB5920 PF07635 RB5920 RB5920 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RB5921 PF07583 RB5921 RB5921 PF07587 RB5921 RB5924 PF04151 Bacterial pre-peptidase C-terminal domain RB5927 PF07394 RB5927 RB5932 PF00348 Polyprenyl synthetase RB5932 PF01976 RB5932 RB5934 PF13243 Prenyltransferase-like RB5934 PF13249 Prenyltransferase-like RB5938 PF13432 Tetratricopeptide repeat RB5940 PF00437 Type II/IV secretion system protein RB5941 PF00482 Type II secretion system (T2SS), protein F RB5942 PF00482 Type II secretion system (T2SS), protein F RB5943 PF00072 Response regulator receiver domain RB5945 PF02230 Phospholipase/Carboxylesterase RB5948 PF00107 Zinc-binding dehydrogenase RB5948 PF08240 Alcohol dehydrogenase GroES-like domain RB5952 PF12044 RB5952 RB5961 PF00132 Bacterial transferase hexapeptide (six repeats) RB5963 PF12694 Putative molybdenum carrier RB5964 PF00990 GGDEF domain RB5964 PF01966 HD domain RB5964 PF08448 PAS fold RB5968 PF08281 Sigma-70, region 4 RB5969 PF00270 DEAD/DEAH box helicase RB5969 PF00271 Helicase conserved C-terminal domain RB5969 PF00570 HRDC domain RB5969 PF09382 RQC domain RB5969 PF14493 RB5969 RB5969 PF16124 RB5969 RB5971 PF02653 RB5971 RB5972 PF00005 ABC transporter RB5973 PF13407 Periplasmic binding protein domain RB598 PF07586 RB598 RB5982 PF07690 Major Facilitator Superfamily RB5983 PF00696 Amino acid kinase family RB5984 PF00202 Aminotransferase class-III RB5986 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RB5986 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RB5991 PF00534 Glycosyl transferases group 1 RB5991 PF13439 Glycosyltransferase Family 4 RB5993 PF01764 Lipase (class 3) RB5995 PF07728 AAA domain (dynein-related subfamily) RB5998 PF02502 Ribose/Galactose Isomerase RB5999 PF00589 Phage integrase family RB5999 PF02899 Phage integrase, N-terminal SAM-like domain RB601 PF12796 Ankyrin repeats (3 copies) RB6012 PF13546 RB6012 RB6025 PF00404 Dockerin type I repeat RB6025 PF07595 RB6025 RB6033 PF00069 Protein kinase domain RB6033 PF13374 Tetratricopeptide repeat RB6034 PF04542 Sigma-70 region 2 RB6034 PF04545 Sigma-70, region 4 RB6040 PF01595 RB6040 RB6042 PF01595 RB6042 RB6042 PF03471 Transporter associated domain RB6049 PF01583 Adenylylsulphate kinase RB605 PF00884 Sulfatase RB605 PF16385 RB605 RB6053 PF07394 RB6053 RB6054 PF07583 RB6054 RB6054 PF07587 RB6054 RB6054 PF07635 RB6054 RB6056 PF07726 ATPase family associated with various cellular activities (AAA) RB6057 PF13709 Domain of unknown function (DUF4159) RB6061 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RB6061 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RB6061 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RB6061 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RB6063 PF01544 CorA-like Mg2+ transporter protein RB6065 PF02463 RecF/RecN/SMC N terminal domain RB6065 PF06470 SMC proteins Flexible Hinge Domain RB6067 PF04306 RB6067 RB607 PF00884 Sulfatase RB6070 PF14279 RB6070 RB6075 PF13738 Pyridine nucleotide-disulphide oxidoreductase RB6078 PF04542 Sigma-70 region 2 RB6078 PF08281 Sigma-70, region 4 RB6087 PF00072 Response regulator receiver domain RB609 PF05448 Acetyl xylan esterase (AXE1) RB6090 PF02261 Aspartate decarboxylase RB6095 PF02614 Glucuronate isomerase RB6100 PF07583 RB6100 RB6100 PF07587 RB6100 RB6101 PF07394 RB6101 RB6107 PF07591 Pretoxin HINT domain RB6114 PF08245 Mur ligase middle domain RB6120 PF04389 Peptidase family M28 RB6120 PF07676 WD40-like Beta Propeller Repeat RB6120 PF13180 PDZ domain RB6126 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RB6126 PF01872 RibD C-terminal domain RB6127 PF13768 von Willebrand factor type A domain RB6133 PF02222 ATP-grasp domain RB6135 PF00731 AIR carboxylase RB6139 PF04229 GrpB protein RB614 PF13360 PQQ-like domain RB6142 PF00248 Aldo/keto reductase family RB6145 PF00756 Putative esterase RB6147 PF01761 3-dehydroquinate synthase RB6151 PF09844 RB6151 RB6160 PF05016 Plasmid stabilisation system protein RB6166 PF00589 Phage integrase family RB6166 PF13495 Phage integrase, N-terminal SAM-like domain RB6167 PF04986 RB6167 RB6167 PF14319 RB6167 RB617 PF00400 WD domain, G-beta repeat RB617 PF03983 SLA1 homology domain 1, SHD1 RB617 PF07635 RB617 RB6170 PF09951 RB6170 RB6171 PF00589 Phage integrase family RB6180 PF02416 mttA/Hcf106 family RB6184 PF02416 mttA/Hcf106 family RB6185 PF00034 Cytochrome c RB6185 PF13646 HEAT repeats RB6190 PF13472 GDSL-like Lipase/Acylhydrolase family RB6196 PF00884 Sulfatase RB6196 PF16347 RB6196 RB6199 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB6199 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RB6201 PF00270 DEAD/DEAH box helicase RB6201 PF00271 Helicase conserved C-terminal domain RB6201 PF02559 CarD-like/TRCF domain RB6201 PF03461 TRCF domain RB6207 PF13360 PQQ-like domain RB6209 PF01968 Hydantoinase/oxoprolinase RB621 PF07638 ECF sigma factor RB6215 PF00464 Serine hydroxymethyltransferase RB6217 PF00072 Response regulator receiver domain RB6221 PF16313 RB6221 RB6221 PF17148 RB6221 RB6226 PF08331 RB6226 RB6226 PF13484 RB6226 RB6226 PF13646 HEAT repeats RB6227 PF00571 CBS domain RB6227 PF00999 Sodium/hydrogen exchanger family RB6236 PF00005 ABC transporter RB6237 PF02875 Mur ligase family, glutamate ligase domain RB6237 PF08245 Mur ligase middle domain RB6238 PF00571 CBS domain RB6238 PF01595 RB6238 RB6240 PF13561 Enoyl-(Acyl carrier protein) reductase RB6241 PF00534 Glycosyl transferases group 1 RB6242 PF04932 RB6242 RB6246 PF00266 Aminotransferase class-V RB6248 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RB6248 PF01842 ACT domain RB6248 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RB6254 PF00483 Nucleotidyl transferase RB6255 PF13432 Tetratricopeptide repeat RB6255 PF13435 Cytochrome c554 and c-prime RB6259 PF01618 RB6259 RB6269 PF01370 NAD dependent epimerase/dehydratase family RB6271 PF00589 Phage integrase family RB6271 PF02899 Phage integrase, N-terminal SAM-like domain RB6272 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RB6272 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RB6276 PF00216 Bacterial DNA-binding protein RB6278 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RB6278 PF05345 Putative Ig domain RB6278 PF07595 RB6278 RB6282 PF10722 Putative bacterial sensory transduction regulator RB6285 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RB6285 PF05221 S-adenosyl-L-homocysteine hydrolase RB6288 PF07583 RB6288 RB6288 PF07587 RB6288 RB6288 PF07635 RB6288 RB6289 PF12146 Putative lysophospholipase RB6291 PF12127 RB6291 RB6292 PF00977 Histidine biosynthesis protein RB6300 PF00117 Glutamine amidotransferase class-I RB6302 PF00293 NUDIX domain RB6305 PF00535 Glycosyl transferase family 2 RB631 PF00069 Protein kinase domain RB6310 PF13116 RB6310 RB6310 PF13502 RB6310 RB6315 PF00196 Bacterial regulatory proteins, luxR family RB6327 PF13561 Enoyl-(Acyl carrier protein) reductase RB6328 PF01928 CYTH domain RB633 PF00404 Dockerin type I repeat RB633 PF03098 Animal haem peroxidase RB633 PF07595 RB633 RB6331 PF02581 Thiamine monophosphate synthase/TENI RB6332 PF13472 GDSL-like Lipase/Acylhydrolase family RB6337 PF06182 RB6337 RB6339 PF06182 RB6339 RB6344 PF01807 CHC2 zinc finger RB6344 PF08275 DNA primase catalytic core, N-terminal domain RB6344 PF13662 Toprim domain RB6347 PF00140 Sigma-70 factor, region 1 RB6347 PF03979 Sigma-70 factor, region 1 RB6347 PF04539 Sigma-70 region 3 RB6347 PF04542 Sigma-70 region 2 RB6347 PF04545 Sigma-70, region 4 RB6350 PF00115 Cytochrome C and Quinol oxidase polypeptide I RB6350 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO RB6353 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB6353 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RB6355 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RB6355 PF12801 RB6355 RB6355 PF13746 4Fe-4S dicluster domain RB6356 PF05751 RB6356 RB6357 PF13386 RB6357 RB6360 PF00122 E1-E2 ATPase RB6360 PF00403 Heavy-metal-associated domain RB6360 PF00702 haloacid dehalogenase-like hydrolase RB6360 PF12156 RB6360 RB6363 PF03597 RB6363 RB6364 PF12697 Alpha/beta hydrolase family RB637 PF04542 Sigma-70 region 2 RB637 PF04545 Sigma-70, region 4 RB6370 PF02954 Bacterial regulatory protein, Fis family RB6373 PF01926 50S ribosome-binding GTPase RB6375 PF14237 RB6375 RB6377 PF13632 Glycosyl transferase family group 2 RB638 PF13360 PQQ-like domain RB6381 PF10091 Putative glucoamylase RB6383 PF04349 Periplasmic glucan biosynthesis protein, MdoG RB6384 PF00578 AhpC/TSA family RB6384 PF09865 RB6384 RB6386 PF01261 Xylose isomerase-like TIM barrel RB6387 PF01694 Rhomboid family RB6389 PF12127 RB6389 RB6391 PF03631 RB6391 RB6394 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RB6394 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RB6395 PF13374 Tetratricopeptide repeat RB6395 PF13429 Tetratricopeptide repeat RB6395 PF13432 Tetratricopeptide repeat RB6400 PF13360 PQQ-like domain RB6403 PF00196 Bacterial regulatory proteins, luxR family RB6403 PF08448 PAS fold RB6409 PF12006 RB6409 RB641 PF00072 Response regulator receiver domain RB641 PF00512 His Kinase A (phospho-acceptor) domain RB641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB641 PF08447 PAS fold RB641 PF08448 PAS fold RB6411 PF01509 TruB family pseudouridylate synthase (N terminal domain) RB6415 PF00037 4Fe-4S binding domain RB6415 PF11953 Domain of unknown function (DUF3470) RB6416 PF10672 S-adenosylmethionine-dependent methyltransferase RB6417 PF16697 RB6417 RB6425 PF00444 Ribosomal protein L36 RB6426 PF13480 Acetyltransferase (GNAT) domain RB6428 PF02469 Fasciclin domain RB6431 PF07586 RB6431 RB6432 PF07624 RB6432 RB6432 PF07626 RB6432 RB6432 PF07627 RB6432 RB6432 PF07631 RB6432 RB6432 PF07635 RB6432 RB6432 PF07637 RB6432 RB6432 PF13385 Concanavalin A-like lectin/glucanases superfamily RB6435 PF01648 4'-phosphopantetheinyl transferase superfamily RB6436 PF00579 tRNA synthetases class I (W and Y) RB6442 PF01053 Cys/Met metabolism PLP-dependent enzyme RB6443 PF01053 Cys/Met metabolism PLP-dependent enzyme RB6446 PF01882 RB6446 RB6447 PF07584 RB6447 RB6448 PF00092 von Willebrand factor type A domain RB6458 PF07596 RB6458 RB6458 PF13633 Prokaryotic N-terminal methylation site RB6459 PF00404 Dockerin type I repeat RB6459 PF07595 RB6459 RB6459 PF14717 Domain of unknown function (DUF4465) RB6464 PF01370 NAD dependent epimerase/dehydratase family RB6466 PF00009 Elongation factor Tu GTP binding domain RB6466 PF00679 Elongation factor G C-terminus RB6466 PF03144 Elongation factor Tu domain 2 RB6467 PF00300 Histidine phosphatase superfamily (branch 1) RB6469 PF00005 ABC transporter RB6470 PF02517 CAAX protease self-immunity RB6470 PF12679 RB6470 RB6472 PF00953 Glycosyl transferase family 4 RB6480 PF02563 Polysaccharide biosynthesis/export protein RB6482 PF00849 RNA pseudouridylate synthase RB6483 PF00270 DEAD/DEAH box helicase RB6483 PF00271 Helicase conserved C-terminal domain RB6484 PF00809 Pterin binding enzyme RB6485 PF04055 Radical SAM superfamily RB6486 PF13360 PQQ-like domain RB6488 PF01487 Type I 3-dehydroquinase RB6488 PF01488 Shikimate / quinate 5-dehydrogenase RB6488 PF08501 Shikimate dehydrogenase substrate binding domain RB6489 PF01168 Alanine racemase, N-terminal domain RB6489 PF14031 Putative serine dehydratase domain RB6490 PF13180 PDZ domain RB6490 PF13365 Trypsin-like peptidase domain RB6491 PF00309 RB6491 RB6491 PF04552 Sigma-54, DNA binding domain RB6491 PF04963 Sigma-54 factor, core binding domain RB6492 PF02132 RecR protein RB6492 PF13662 Toprim domain RB6493 PF02575 YbaB/EbfC DNA-binding family RB6494 PF12169 DNA polymerase III subunits gamma and tau domain III RB6494 PF13177 DNA polymerase III, delta subunit RB6497 PF09912 RB6497 RB6499 PF00892 EamA-like transporter family RB6500 PF00107 Zinc-binding dehydrogenase RB6500 PF00109 Beta-ketoacyl synthase, N-terminal domain RB6500 PF00501 AMP-binding enzyme RB6500 PF00550 Phosphopantetheine attachment site RB6500 PF00668 Condensation domain RB6500 PF00698 Acyl transferase domain RB6500 PF00975 Thioesterase domain RB6500 PF02801 Beta-ketoacyl synthase, C-terminal domain RB6500 PF08240 Alcohol dehydrogenase GroES-like domain RB6500 PF08659 KR domain RB6500 PF13193 AMP-binding enzyme C-terminal domain RB6500 PF13745 HxxPF-repeated domain RB6500 PF14765 Polyketide synthase dehydratase RB6500 PF16197 RB6500 RB6502 PF02687 RB6502 RB6502 PF12704 MacB-like periplasmic core domain RB6510 PF07394 RB6510 RB6511 PF07583 RB6511 RB6511 PF07587 RB6511 RB6511 PF07635 RB6511 RB6517 PF04542 Sigma-70 region 2 RB6518 PF13385 Concanavalin A-like lectin/glucanases superfamily RB6520 PF00534 Glycosyl transferases group 1 RB6520 PF13439 Glycosyltransferase Family 4 RB6523 PF13692 Glycosyl transferases group 1 RB6524 PF00156 Phosphoribosyl transferase domain RB6530 PF04337 Protein of unknown function, DUF480 RB6533 PF00501 AMP-binding enzyme RB6533 PF01553 Acyltransferase RB6537 PF01263 Aldose 1-epimerase RB6538 PF00474 Sodium:solute symporter family RB6542 PF12833 Helix-turn-helix domain RB6542 PF13377 Periplasmic binding protein-like domain RB655 PF10005 RB655 RB655 PF15887 RB655 RB6552 PF00472 RF-1 domain RB6552 PF03462 PCRF domain RB6554 PF03054 tRNA methyl transferase RB6556 PF07394 RB6556 RB6557 PF07583 RB6557 RB6557 PF07587 RB6557 RB6557 PF07635 RB6557 RB6563 PF00793 DAHP synthetase I family RB6566 PF00781 Diacylglycerol kinase catalytic domain RB6572 PF07586 RB6572 RB6574 PF07624 RB6574 RB6574 PF07626 RB6574 RB6574 PF07627 RB6574 RB6574 PF07631 RB6574 RB6574 PF07637 RB6574 RB658 PF01594 RB658 RB6586 PF06078 Bacterial protein of unknown function (DUF937) RB6588 PF01048 Phosphorylase superfamily RB6595 PF13488 RB6595 RB6596 PF10056 RB6596 RB6599 PF00884 Sulfatase RB6599 PF16347 RB6599 RB6603 PF07726 ATPase family associated with various cellular activities (AAA) RB6607 PF01121 Dephospho-CoA kinase RB661 PF12787 RB661 RB6615 PF06439 Domain of Unknown Function (DUF1080) RB6616 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RB6616 PF02843 Phosphoribosylglycinamide synthetase, C domain RB6616 PF02844 Phosphoribosylglycinamide synthetase, N domain RB6620 PF13145 PPIC-type PPIASE domain RB6623 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RB6623 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RB6624 PF02397 RB6624 RB6624 PF13727 CoA-binding domain RB6627 PF05991 RB6627 RB6629 PF00326 Prolyl oligopeptidase family RB6634 PF07596 RB6634 RB6634 PF13544 RB6634 RB6636 PF13546 RB6636 RB6643 PF04542 Sigma-70 region 2 RB6643 PF08281 Sigma-70, region 4 RB6644 PF00069 Protein kinase domain RB6654 PF00534 Glycosyl transferases group 1 RB6654 PF08323 Starch synthase catalytic domain RB6656 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RB6658 PF06283 Trehalose utilisation RB6669 PF00004 ATPase family associated with various cellular activities (AAA) RB6669 PF12458 RB6669 RB6670 PF01300 Telomere recombination RB6670 PF03481 Putative GTP-binding controlling metal-binding RB6671 PF13429 Tetratricopeptide repeat RB6671 PF13432 Tetratricopeptide repeat RB6678 PF07621 RB6678 RB668 PF12146 Putative lysophospholipase RB6683 PF00285 Citrate synthase RB6686 PF00072 Response regulator receiver domain RB6686 PF00486 Transcriptional regulatory protein, C terminal RB6688 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RB6688 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RB6690 PF01116 Fructose-bisphosphate aldolase class-II RB6697 PF01909 Nucleotidyltransferase domain RB6698 PF00805 Pentapeptide repeats (8 copies) RB6707 PF01609 Transposase DDE domain RB6708 PF00665 Integrase core domain RB6708 PF13276 RB6708 RB6709 PF01527 Transposase RB6716 PF03600 Citrate transporter RB6722 PF07596 RB6722 RB6722 PF13544 RB6722 RB6725 PF07859 alpha/beta hydrolase fold RB6729 PF01791 DeoC/LacD family aldolase RB6732 PF07619 RB6732 RB6732 PF07622 RB6732 RB6732 PF07676 WD40-like Beta Propeller Repeat RB6736 PF13546 RB6736 RB6740 PF12710 haloacid dehalogenase-like hydrolase RB6746 PF13847 Methyltransferase domain RB6747 PF04055 Radical SAM superfamily RB6747 PF12345 RB6747 RB6751 PF00004 ATPase family associated with various cellular activities (AAA) RB6751 PF02151 UvrB/uvrC motif RB6751 PF02861 Clp amino terminal domain RB6751 PF07724 AAA domain (Cdc48 subfamily) RB6751 PF10431 C-terminal, D2-small domain, of ClpB protein RB6753 PF00425 chorismate binding enzyme RB6753 PF04715 Anthranilate synthase component I, N terminal region RB6755 PF00501 AMP-binding enzyme RB6756 PF08443 RimK-like ATP-grasp domain RB6759 PF02289 Cyclohydrolase (MCH) RB6761 PF00578 AhpC/TSA family RB6763 PF02958 Ecdysteroid kinase RB6765 PF00884 Sulfatase RB6765 PF16347 RB6765 RB6767 PF00580 UvrD/REP helicase N-terminal domain RB6767 PF13361 UvrD-like helicase C-terminal domain RB6770 PF01016 Ribosomal L27 protein RB678 PF06134 L-rhamnose isomerase (RhaA) RB6780 PF04542 Sigma-70 region 2 RB6780 PF04545 Sigma-70, region 4 RB6781 PF00884 Sulfatase RB6781 PF16347 RB6781 RB6793 PF00892 EamA-like transporter family RB6795 PF07394 RB6795 RB6796 PF07583 RB6796 RB6796 PF07587 RB6796 RB6799 PF14100 RB6799 RB680 PF02311 AraC-like ligand binding domain RB680 PF12833 Helix-turn-helix domain RB6802 PF13561 Enoyl-(Acyl carrier protein) reductase RB6807 PF03629 Domain of unknown function (DUF303) RB6808 PF01597 Glycine cleavage H-protein RB6809 PF00586 AIR synthase related protein, N-terminal domain RB6809 PF02769 AIR synthase related protein, C-terminal domain RB681 PF00596 Class II Aldolase and Adducin N-terminal domain RB6813 PF00578 AhpC/TSA family RB6818 PF00512 His Kinase A (phospho-acceptor) domain RB6818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB6821 PF00155 Aminotransferase class I and II RB6822 PF01264 Chorismate synthase RB6823 PF00140 Sigma-70 factor, region 1 RB6823 PF04539 Sigma-70 region 3 RB6823 PF04542 Sigma-70 region 2 RB6823 PF04545 Sigma-70, region 4 RB6825 PF03710 Glutamate-ammonia ligase adenylyltransferase RB6825 PF08335 GlnD PII-uridylyltransferase RB6827 PF00012 Hsp70 protein RB6827 PF00069 Protein kinase domain RB6828 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RB6828 PF03900 Porphobilinogen deaminase, C-terminal domain RB683 PF00171 Aldehyde dehydrogenase family RB6831 PF00202 Aminotransferase class-III RB684 PF00884 Sulfatase RB6841 PF12804 MobA-like NTP transferase domain RB6844 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RB6844 PF14572 Phosphoribosyl synthetase-associated domain RB6845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RB6850 PF07596 RB6850 RB6850 PF13633 Prokaryotic N-terminal methylation site RB6852 PF07596 RB6852 RB6852 PF13633 Prokaryotic N-terminal methylation site RB6858 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB686 PF00884 Sulfatase RB6860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB6866 PF03983 SLA1 homology domain 1, SHD1 RB6867 PF07607 RB6867 RB6873 PF00884 Sulfatase RB6876 PF13472 GDSL-like Lipase/Acylhydrolase family RB6881 PF02687 RB6881 RB6883 PF00005 ABC transporter RB6885 PF13435 Cytochrome c554 and c-prime RB6888 PF07610 RB6888 RB6891 PF04932 RB6891 RB6895 PF00953 Glycosyl transferase family 4 RB6901 PF07624 RB6901 RB6901 PF07626 RB6901 RB6901 PF07627 RB6901 RB6901 PF07631 RB6901 RB6901 PF07635 RB6901 RB6901 PF07637 RB6901 RB6904 PF07586 RB6904 RB6911 PF07596 RB6911 RB6911 PF13633 Prokaryotic N-terminal methylation site RB6914 PF07593 RB6914 RB6914 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB6920 PF07596 RB6920 RB6920 PF13633 Prokaryotic N-terminal methylation site RB693 PF01797 Transposase IS200 like RB6930 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RB6930 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RB6932 PF00291 Pyridoxal-phosphate dependent enzyme RB6933 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RB6935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RB6935 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RB6945 PF00211 Adenylate and Guanylate cyclase catalytic domain RB6945 PF00672 HAMP domain RB6949 PF03706 RB6949 RB695 PF00884 Sulfatase RB695 PF06439 Domain of Unknown Function (DUF1080) RB6950 PF01219 Prokaryotic diacylglycerol kinase RB6956 PF00884 Sulfatase RB6958 PF03703 RB6958 RB6959 PF05491 Holliday junction DNA helicase ruvB C-terminus RB6959 PF05496 Holliday junction DNA helicase ruvB N-terminus RB6961 PF04542 Sigma-70 region 2 RB6961 PF08281 Sigma-70, region 4 RB6962 PF04079 Putative transcriptional regulators (Ypuh-like) RB6963 PF04055 Radical SAM superfamily RB6967 PF01594 RB6967 RB6969 PF07394 RB6969 RB6971 PF07583 RB6971 RB6971 PF07587 RB6971 RB6973 PF13649 Methyltransferase domain RB6977 PF01704 UTP--glucose-1-phosphate uridylyltransferase RB6978 PF13437 HlyD family secretion protein RB6982 PF00005 ABC transporter RB6983 PF02687 RB6983 RB6983 PF12704 MacB-like periplasmic core domain RB6985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB6993 PF01507 Phosphoadenosine phosphosulfate reductase family RB6994 PF02082 Transcriptional regulator RB6996 PF00669 Bacterial flagellin N-terminal helical region RB6996 PF00700 Bacterial flagellin C-terminal helical region RB6996 PF07196 Flagellin hook IN motif RB700 PF05592 Bacterial alpha-L-rhamnosidase RB700 PF08531 Alpha-L-rhamnosidase N-terminal domain RB7000 PF01541 GIY-YIG catalytic domain RB7004 PF00106 short chain dehydrogenase RB7008 PF01926 50S ribosome-binding GTPase RB7008 PF13167 RB7008 RB7008 PF16360 RB7008 RB7010 PF01541 GIY-YIG catalytic domain RB7010 PF02151 UvrB/uvrC motif RB7010 PF08459 UvrC Helix-hairpin-helix N-terminal RB7019 PF02627 Carboxymuconolactone decarboxylase family RB7020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RB7020 PF02602 Uroporphyrinogen-III synthase HemD RB7022 PF01649 Ribosomal protein S20 RB7023 PF09335 RB7023 RB7028 PF13088 BNR repeat-like domain RB7030 PF07586 RB7030 RB7033 PF07624 RB7033 RB7033 PF07626 RB7033 RB7033 PF07627 RB7033 RB7033 PF07631 RB7033 RB7033 PF07635 RB7033 RB7033 PF07637 RB7033 RB7033 PF16841 RB7033 RB7038 PF07639 RB7038 RB704 PF01527 Transposase RB7058 PF00069 Protein kinase domain RB7058 PF02743 Cache domain RB706 PF00665 Integrase core domain RB706 PF13276 RB706 RB7061 PF06537 RB7061 RB7063 PF07595 RB7063 RB7070 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RB7072 PF03099 Biotin/lipoate A/B protein ligase family RB7074 PF02687 RB7074 RB7074 PF12704 MacB-like periplasmic core domain RB7078 PF02321 Outer membrane efflux protein RB708 PF00884 Sulfatase RB7081 PF13561 Enoyl-(Acyl carrier protein) reductase RB7084 PF00571 CBS domain RB7084 PF01368 DHH family RB7084 PF02833 DHHA2 domain RB7084 PF07085 DRTGG domain RB7087 PF02441 Flavoprotein RB7088 PF01192 RNA polymerase Rpb6 RB7090 PF00625 Guanylate kinase RB7091 PF03755 RB7091 RB7091 PF08340 RB7091 RB7093 PF03840 Preprotein translocase SecG subunit RB7095 PF00121 Triosephosphate isomerase RB7096 PF00793 DAHP synthetase I family RB7098 PF04542 Sigma-70 region 2 RB7098 PF08281 Sigma-70, region 4 RB7099 PF00092 von Willebrand factor type A domain RB7099 PF12034 RB7099 RB7099 PF12450 RB7099 RB7100 PF13803 RB7100 RB7102 PF01145 SPFH domain / Band 7 family RB7104 PF01145 SPFH domain / Band 7 family RB7108 PF07628 RB7108 RB711 PF13472 GDSL-like Lipase/Acylhydrolase family RB7110 PF07628 RB7110 RB7112 PF03147 Ferredoxin-fold anticodon binding domain RB7112 PF03483 B3/4 domain RB7112 PF03484 tRNA synthetase B5 domain RB7114 PF01409 tRNA synthetases class II core domain (F) RB7114 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RB7115 PF00453 Ribosomal protein L20 RB7117 PF01632 Ribosomal protein L35 RB7120 PF13360 PQQ-like domain RB7123 PF00072 Response regulator receiver domain RB7129 PF04023 FeoA domain RB7130 PF02421 Ferrous iron transport protein B RB7130 PF07664 RB7130 RB7130 PF07670 Nucleoside recognition RB7131 PF02470 RB7131 RB7134 PF00005 ABC transporter RB7135 PF02405 RB7135 RB714 PF07583 RB714 RB714 PF07587 RB714 RB714 PF07635 RB714 RB7144 PF01522 Polysaccharide deacetylase RB7146 PF00534 Glycosyl transferases group 1 RB7146 PF13439 Glycosyltransferase Family 4 RB7147 PF01553 Acyltransferase RB7152 PF06439 Domain of Unknown Function (DUF1080) RB7157 PF13469 Sulfotransferase family RB716 PF07394 RB716 RB7161 PF03819 MazG nucleotide pyrophosphohydrolase domain RB7166 PF00005 ABC transporter RB7167 PF07977 FabA-like domain RB7168 PF00550 Phosphopantetheine attachment site RB7169 PF07977 FabA-like domain RB7171 PF00109 Beta-ketoacyl synthase, N-terminal domain RB7171 PF02801 Beta-ketoacyl synthase, C-terminal domain RB7173 PF00348 Polyprenyl synthetase RB7175 PF01967 MoaC family RB7184 PF00072 Response regulator receiver domain RB7184 PF12728 Helix-turn-helix domain RB719 PF07636 RB719 RB7190 PF00498 FHA domain RB7190 PF07228 Stage II sporulation protein E (SpoIIE) RB7190 PF13185 GAF domain RB7193 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB7195 PF07621 RB7195 RB7196 PF05685 Putative restriction endonuclease RB7198 PF03965 Penicillinase repressor RB720 PF00884 Sulfatase RB7200 PF05569 BlaR1 peptidase M56 RB7200 PF13899 Thioredoxin-like RB7201 PF01541 GIY-YIG catalytic domain RB7201 PF02151 UvrB/uvrC motif RB7205 PF14094 RB7205 RB7206 PF01964 ThiC family RB7208 PF02151 UvrB/uvrC motif RB7209 PF14099 Polysaccharide lyase RB7210 PF01895 PhoU domain RB7211 PF00005 ABC transporter RB7212 PF00528 Binding-protein-dependent transport system inner membrane component RB7213 PF00528 Binding-protein-dependent transport system inner membrane component RB7215 PF12849 PBP superfamily domain RB7220 PF02554 RB7220 RB7220 PF13722 RB7220 RB7223 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB7225 PF03629 Domain of unknown function (DUF303) RB7228 PF07394 RB7228 RB7229 PF07583 RB7229 RB7229 PF07587 RB7229 RB7229 PF07635 RB7229 RB7229 PF13385 Concanavalin A-like lectin/glucanases superfamily RB723 PF07623 RB723 RB7232 PF00005 ABC transporter RB7235 PF07978 NIPSNAP RB7237 PF00488 MutS domain V RB7237 PF01624 MutS domain I RB7237 PF05188 MutS domain II RB7237 PF05190 MutS family domain IV RB7237 PF05192 MutS domain III RB7238 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB724 PF00884 Sulfatase RB7240 PF07593 RB7240 RB7240 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB7244 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RB7247 PF00120 Glutamine synthetase, catalytic domain RB7247 PF03951 Glutamine synthetase, beta-Grasp domain RB7251 PF07596 RB7251 RB7251 PF13633 Prokaryotic N-terminal methylation site RB7259 PF00133 tRNA synthetases class I (I, L, M and V) RB7259 PF08264 Anticodon-binding domain of tRNA RB7260 PF00551 Formyl transferase RB7263 PF13435 Cytochrome c554 and c-prime RB7275 PF00202 Aminotransferase class-III RB7276 PF00501 AMP-binding enzyme RB7276 PF00550 Phosphopantetheine attachment site RB7276 PF12146 Putative lysophospholipase RB7276 PF13193 AMP-binding enzyme C-terminal domain RB7277 PF12146 Putative lysophospholipase RB728 PF00034 Cytochrome c RB728 PF06439 Domain of Unknown Function (DUF1080) RB7285 PF03279 RB7285 RB7287 PF09084 NMT1/THI5 like RB7288 PF00528 Binding-protein-dependent transport system inner membrane component RB7289 PF00005 ABC transporter RB7292 PF12706 Beta-lactamase superfamily domain RB7294 PF13561 Enoyl-(Acyl carrier protein) reductase RB7297 PF05618 Putative ATP-dependant zinc protease RB7299 PF02080 TrkA-C domain RB7299 PF08443 RimK-like ATP-grasp domain RB7300 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RB7301 PF00270 DEAD/DEAH box helicase RB7301 PF00271 Helicase conserved C-terminal domain RB7306 PF13458 Periplasmic binding protein RB7308 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB7308 PF13426 PAS domain RB7314 PF13407 Periplasmic binding protein domain RB7317 PF00270 DEAD/DEAH box helicase RB7317 PF00271 Helicase conserved C-terminal domain RB7321 PF00404 Dockerin type I repeat RB7321 PF04151 Bacterial pre-peptidase C-terminal domain RB7321 PF07595 RB7321 RB7341 PF00404 Dockerin type I repeat RB7341 PF13229 Right handed beta helix region RB7359 PF00171 Aldehyde dehydrogenase family RB736 PF05592 Bacterial alpha-L-rhamnosidase RB736 PF06439 Domain of Unknown Function (DUF1080) RB7360 PF01052 Surface presentation of antigens (SPOA) RB7360 PF02154 Flagellar motor switch protein FliM RB7367 PF13180 PDZ domain RB7367 PF13365 Trypsin-like peptidase domain RB7368 PF13180 PDZ domain RB7368 PF13365 Trypsin-like peptidase domain RB7371 PF13180 PDZ domain RB7371 PF13365 Trypsin-like peptidase domain RB7374 PF05990 Alpha/beta hydrolase of unknown function (DUF900) RB7375 PF01546 Peptidase family M20/M25/M40 RB7375 PF07687 Peptidase dimerisation domain RB7376 PF11736 Protein of unknown function (DUF3299) RB7381 PF11736 Protein of unknown function (DUF3299) RB7382 PF01261 Xylose isomerase-like TIM barrel RB7385 PF00106 short chain dehydrogenase RB7388 PF00589 Phage integrase family RB7388 PF13495 Phage integrase, N-terminal SAM-like domain RB7389 PF04986 RB7389 RB7389 PF14319 RB7389 RB7399 PF00589 Phage integrase family RB7399 PF13495 Phage integrase, N-terminal SAM-like domain RB7404 PF01903 CbiX RB7408 PF03572 Peptidase family S41 RB7408 PF13180 PDZ domain RB741 PF13385 Concanavalin A-like lectin/glucanases superfamily RB7410 PF00512 His Kinase A (phospho-acceptor) domain RB7410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB7410 PF08448 PAS fold RB7418 PF00034 Cytochrome c RB7424 PF00266 Aminotransferase class-V RB7425 PF02445 Quinolinate synthetase A protein RB7428 PF04241 RB7428 RB7429 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RB7429 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RB7430 PF01979 Amidohydrolase family RB7431 PF00825 Ribonuclease P RB7433 PF04018 RB7433 RB7435 PF02673 RB7435 RB7437 PF01726 LexA DNA binding domain RB7443 PF00460 Flagella basal body rod protein RB7443 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RB7444 PF02049 RB7444 RB7445 PF01514 Secretory protein of YscJ/FliF family RB7445 PF08345 RB7445 RB745 PF01738 Dienelactone hydrolase family RB7452 PF00856 SET domain RB7453 PF00266 Aminotransferase class-V RB7455 PF07639 RB7455 RB7461 PF00072 Response regulator receiver domain RB7461 PF08448 PAS fold RB7461 PF13185 GAF domain RB7465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RB7465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RB7468 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RB7468 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RB7474 PF00072 Response regulator receiver domain RB7474 PF00512 His Kinase A (phospho-acceptor) domain RB7474 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB7474 PF08448 PAS fold RB7481 PF00884 Sulfatase RB7482 PF01370 NAD dependent epimerase/dehydratase family RB7488 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB749 PF13360 PQQ-like domain RB7491 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RB7494 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB7494 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RB7495 PF07619 RB7495 RB7495 PF07622 RB7495 RB7495 PF13432 Tetratricopeptide repeat RB7500 PF07726 ATPase family associated with various cellular activities (AAA) RB7501 PF01882 RB7501 RB7502 PF07584 RB7502 RB7502 PF13519 von Willebrand factor type A domain RB7503 PF00092 von Willebrand factor type A domain RB7503 PF07090 Protein of unknown function (DUF1355) RB7503 PF13768 von Willebrand factor type A domain RB7510 PF07075 Protein of unknown function (DUF1343) RB7512 PF00474 Sodium:solute symporter family RB7514 PF13580 SIS domain RB7515 PF01869 BadF/BadG/BcrA/BcrD ATPase family RB752 PF13502 RB752 RB7521 PF01841 Transglutaminase-like superfamily RB7538 PF13360 PQQ-like domain RB754 PF10531 SLBB domain RB7541 PF13360 PQQ-like domain RB7546 PF02219 Methylenetetrahydrofolate reductase RB7548 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RB7554 PF07811 RB7554 RB7557 PF00092 von Willebrand factor type A domain RB7557 PF13400 RB7557 RB7559 PF07811 RB7559 RB756 PF05569 BlaR1 peptidase M56 RB7560 PF00884 Sulfatase RB7562 PF07859 alpha/beta hydrolase fold RB7564 PF00266 Aminotransferase class-V RB7565 PF01757 RB7565 RB7569 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RB7569 PF06827 Zinc finger found in FPG and IleRS RB7569 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RB757 PF03965 Penicillinase repressor RB7572 PF00365 Phosphofructokinase RB7574 PF04028 RB7574 RB7578 PF02599 Global regulator protein family RB7579 PF00072 Response regulator receiver domain RB7579 PF00158 Sigma-54 interaction domain RB7579 PF02954 Bacterial regulatory protein, Fis family RB7580 PF08543 Phosphomethylpyrimidine kinase RB7583 PF03099 Biotin/lipoate A/B protein ligase family RB7584 PF00266 Aminotransferase class-V RB7585 PF02347 Glycine cleavage system P-protein RB7586 PF01597 Glycine cleavage H-protein RB7587 PF01571 Aminomethyltransferase folate-binding domain RB7587 PF08669 Glycine cleavage T-protein C-terminal barrel domain RB7590 PF00675 Insulinase (Peptidase family M16) RB7590 PF05193 Peptidase M16 inactive domain RB7592 PF00355 Rieske [2Fe-2S] domain RB7597 PF01047 MarR family RB7598 PF00753 Metallo-beta-lactamase superfamily RB7598 PF14863 Alkyl sulfatase dimerisation RB760 PF00884 Sulfatase RB7600 PF00749 tRNA synthetases class I (E and Q), catalytic domain RB7603 PF02321 Outer membrane efflux protein RB7615 PF00583 Acetyltransferase (GNAT) family RB7616 PF02589 Uncharacterised ACR, YkgG family COG1556 RB7618 PF02589 Uncharacterised ACR, YkgG family COG1556 RB7618 PF11870 RB7618 RB7618 PF13183 4Fe-4S dicluster domain RB7619 PF02754 RB7619 RB7623 PF00206 Lyase RB7623 PF10415 Fumarase C C-terminus RB7625 PF02447 RB7625 RB7627 PF00013 KH domain RB7627 PF01966 HD domain RB7627 PF12072 RB7627 RB7629 PF01171 PP-loop family RB763 PF00884 Sulfatase RB763 PF03629 Domain of unknown function (DUF303) RB7633 PF00005 ABC transporter RB7634 PF02517 CAAX protease self-immunity RB7634 PF12679 RB7634 RB7643 PF00535 Glycosyl transferase family 2 RB7652 PF00056 lactate/malate dehydrogenase, NAD binding domain RB7652 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RB7661 PF00155 Aminotransferase class I and II RB7662 PF00475 Imidazoleglycerol-phosphate dehydratase RB7663 PF02367 Uncharacterised P-loop hydrolase UPF0079 RB7673 PF01957 NfeD-like C-terminal, partner-binding RB7675 PF02386 Cation transport protein RB7678 PF00775 Dioxygenase RB7685 PF07596 RB7685 RB7685 PF13633 Prokaryotic N-terminal methylation site RB7688 PF07636 RB7688 RB7692 PF13435 Cytochrome c554 and c-prime RB7705 PF00994 Probable molybdopterin binding domain RB7706 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RB7706 PF00999 Sodium/hydrogen exchanger family RB7709 PF07621 RB7709 RB7713 PF13472 GDSL-like Lipase/Acylhydrolase family RB772 PF00884 Sulfatase RB772 PF14707 C-terminal region of aryl-sulfatase RB7728 PF14317 RB7728 RB773 PF00884 Sulfatase RB7734 PF07607 RB7734 RB774 PF06439 Domain of Unknown Function (DUF1080) RB7745 PF03797 Autotransporter beta-domain RB7750 PF10088 RB7750 RB7754 PF13560 Helix-turn-helix domain RB7760 PF07394 RB7760 RB7762 PF07583 RB7762 RB7762 PF07587 RB7762 RB7762 PF07635 RB7762 RB7769 PF00884 Sulfatase RB7772 PF00884 Sulfatase RB7773 PF12831 FAD dependent oxidoreductase RB7777 PF04205 FMN-binding domain RB7777 PF12801 RB7777 RB778 PF07596 RB778 RB778 PF13633 Prokaryotic N-terminal methylation site RB7781 PF00211 Adenylate and Guanylate cyclase catalytic domain RB7785 PF11199 RB7785 RB7797 PF04542 Sigma-70 region 2 RB7798 PF00069 Protein kinase domain RB7800 PF13366 RB7800 RB7803 PF01208 Uroporphyrinogen decarboxylase (URO-D) RB7803 PF02602 Uroporphyrinogen-III synthase HemD RB7807 PF02390 Putative methyltransferase RB7812 PF00378 Enoyl-CoA hydratase/isomerase family RB7813 PF01904 Protein of unknown function DUF72 RB7818 PF00164 Ribosomal protein S12/S23 RB7820 PF00177 Ribosomal protein S7p/S5e RB7821 PF00009 Elongation factor Tu GTP binding domain RB7821 PF00679 Elongation factor G C-terminus RB7821 PF03144 Elongation factor Tu domain 2 RB7821 PF03764 Elongation factor G, domain IV RB7821 PF14492 Elongation Factor G, domain II RB7822 PF10816 RB7822 RB7823 PF00155 Aminotransferase class I and II RB7824 PF10825 RB7824 RB7829 PF00338 Ribosomal protein S10p/S20e RB783 PF01758 Sodium Bile acid symporter family RB7833 PF00297 Ribosomal protein L3 RB7834 PF00573 Ribosomal protein L4/L1 family RB7836 PF00276 Ribosomal protein L23 RB7837 PF00181 Ribosomal Proteins L2, RNA binding domain RB7837 PF03947 Ribosomal Proteins L2, C-terminal domain RB7838 PF00203 Ribosomal protein S19 RB7839 PF00237 Ribosomal protein L22p/L17e RB7840 PF00189 Ribosomal protein S3, C-terminal domain RB7840 PF07650 KH domain RB7841 PF00252 Ribosomal protein L16p/L10e RB7846 PF00831 Ribosomal L29 protein RB7849 PF00366 Ribosomal protein S17 RB7850 PF00238 Ribosomal protein L14p/L23e RB7851 PF00467 KOW motif RB7851 PF17136 RB7851 RB7852 PF00281 Ribosomal protein L5 RB7852 PF00673 ribosomal L5P family C-terminus RB7854 PF00253 Ribosomal protein S14p/S29e RB7855 PF00410 Ribosomal protein S8 RB7856 PF00347 Ribosomal protein L6 RB7857 PF00861 Ribosomal L18p/L5e family RB7859 PF00333 Ribosomal protein S5, N-terminal domain RB7859 PF03719 Ribosomal protein S5, C-terminal domain RB7863 PF00828 Ribosomal protein L18e/L15 RB7866 PF00344 SecY translocase RB7867 PF00406 Adenylate kinase RB7868 PF00578 AhpC/TSA family RB7869 PF13472 GDSL-like Lipase/Acylhydrolase family RB787 PF01609 Transposase DDE domain RB7871 PF04734 Neutral/alkaline non-lysosomal ceramidase RB7875 PF00884 Sulfatase RB7875 PF14707 C-terminal region of aryl-sulfatase RB7879 PF00884 Sulfatase RB7883 PF01119 DNA mismatch repair protein, C-terminal domain RB7883 PF08676 MutL C terminal dimerisation domain RB7883 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB7885 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RB7894 PF00009 Elongation factor Tu GTP binding domain RB7894 PF03143 Elongation factor Tu C-terminal domain RB7894 PF03144 Elongation factor Tu domain 2 RB7897 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RB7898 PF02357 Transcription termination factor nusG RB7899 PF00298 Ribosomal protein L11, RNA binding domain RB7899 PF03946 Ribosomal protein L11, N-terminal domain RB7900 PF01641 SelR domain RB7903 PF00005 ABC transporter RB7906 PF03602 Conserved hypothetical protein 95 RB7907 PF07859 alpha/beta hydrolase fold RB7911 PF13365 Trypsin-like peptidase domain RB7919 PF00069 Protein kinase domain RB792 PF00999 Sodium/hydrogen exchanger family RB7924 PF08281 Sigma-70, region 4 RB7926 PF04542 Sigma-70 region 2 RB7928 PF00069 Protein kinase domain RB7928 PF06271 RB7928 RB7940 PF01432 Peptidase family M3 RB7941 PF00009 Elongation factor Tu GTP binding domain RB7941 PF01583 Adenylylsulphate kinase RB7943 PF01507 Phosphoadenosine phosphosulfate reductase family RB7945 PF02527 rRNA small subunit methyltransferase G RB7947 PF13181 Tetratricopeptide repeat RB7947 PF13432 Tetratricopeptide repeat RB7957 PF01131 DNA topoisomerase RB7957 PF01751 Toprim domain RB7957 PF13368 RB7957 RB7959 PF00005 ABC transporter RB7960 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain RB7962 PF02151 UvrB/uvrC motif RB7967 PF00425 chorismate binding enzyme RB7967 PF04715 Anthranilate synthase component I, N terminal region RB7970 PF10077 RB7970 RB7973 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB7973 PF13472 GDSL-like Lipase/Acylhydrolase family RB7985 PF01112 Asparaginase RB7985 PF14534 Domain of unknown function (DUF4440) RB7987 PF07583 RB7987 RB7987 PF07635 RB7987 RB7989 PF07583 RB7989 RB7989 PF07587 RB7989 RB7991 PF07394 RB7991 RB7995 PF00884 Sulfatase RB7998 PF01370 NAD dependent epimerase/dehydratase family RB7999 PF00701 Dihydrodipicolinate synthetase family RB8 PF00176 SNF2 family N-terminal domain RB8 PF00271 Helicase conserved C-terminal domain RB8002 PF00884 Sulfatase RB8008 PF07596 RB8008 RB8008 PF13633 Prokaryotic N-terminal methylation site RB8011 PF07608 RB8011 RB8016 PF01699 Sodium/calcium exchanger protein RB8018 PF07624 RB8018 RB8018 PF07626 RB8018 RB8018 PF07627 RB8018 RB8018 PF07631 RB8018 RB8018 PF07635 RB8018 RB8018 PF07637 RB8018 RB8022 PF07586 RB8022 RB8026 PF03781 Sulfatase-modifying factor enzyme 1 RB8027 PF07638 ECF sigma factor RB8028 PF00069 Protein kinase domain RB8029 PF13561 Enoyl-(Acyl carrier protein) reductase RB8030 PF00884 Sulfatase RB8031 PF10282 Lactonase, 7-bladed beta-propeller RB8035 PF02080 TrkA-C domain RB8035 PF02254 TrkA-N domain RB8037 PF12710 haloacid dehalogenase-like hydrolase RB8037 PF13740 ACT domain RB8038 PF01968 Hydantoinase/oxoprolinase RB8038 PF02538 RB8038 RB8038 PF05378 RB8038 RB8039 PF13360 PQQ-like domain RB8046 PF02687 RB8046 RB8049 PF03477 ATP cone domain RB8052 PF03703 RB8052 RB8060 PF00588 SpoU rRNA Methylase family RB8062 PF06733 DEAD_2 RB8062 PF13307 Helicase C-terminal domain RB807 PF01609 Transposase DDE domain RB807 PF13808 RB807 RB8071 PF11104 Type IV pilus assembly protein PilM; RB8071 PF12773 RB8071 RB8073 PF04616 Glycosyl hydrolases family 43 RB8076 PF03652 Uncharacterised protein family (UPF0081) RB8077 PF01364 Peptidase family C25 RB8078 PF00884 Sulfatase RB8078 PF14707 C-terminal region of aryl-sulfatase RB8080 PF00977 Histidine biosynthesis protein RB8082 PF04244 Deoxyribodipyrimidine photo-lyase-related protein RB8085 PF13360 PQQ-like domain RB8089 PF07589 RB8089 RB8091 PF07596 RB8091 RB8093 PF07610 RB8093 RB8096 PF07596 RB8096 RB8096 PF13633 Prokaryotic N-terminal methylation site RB8102 PF07596 RB8102 RB8102 PF13633 Prokaryotic N-terminal methylation site RB8113 PF00005 ABC transporter RB8116 PF00392 Bacterial regulatory proteins, gntR family RB8117 PF01943 RB8117 RB8123 PF07977 FabA-like domain RB8125 PF13561 Enoyl-(Acyl carrier protein) reductase RB8126 PF01063 Aminotransferase class IV RB8134 PF05496 Holliday junction DNA helicase ruvB N-terminus RB8134 PF12002 MgsA AAA+ ATPase C terminal RB8134 PF16193 RB8134 RB814 PF01527 Transposase RB8140 PF00578 AhpC/TSA family RB8149 PF02599 Global regulator protein family RB815 PF00665 Integrase core domain RB815 PF13276 RB815 RB8152 PF02082 Transcriptional regulator RB8153 PF09967 RB8153 RB8153 PF13203 RB8153 RB8157 PF07728 AAA domain (dynein-related subfamily) RB8161 PF03372 Endonuclease/Exonuclease/phosphatase family RB8163 PF01987 Mitochondrial biogenesis AIM24 RB8167 PF13432 Tetratricopeptide repeat RB8167 PF13485 Peptidase MA superfamily RB8171 PF13709 Domain of unknown function (DUF4159) RB8173 PF07726 ATPase family associated with various cellular activities (AAA) RB8174 PF01882 RB8174 RB8176 PF07584 RB8176 RB8176 PF13519 von Willebrand factor type A domain RB818 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RB818 PF08388 RB818 RB8188 PF01261 Xylose isomerase-like TIM barrel RB8189 PF00270 DEAD/DEAH box helicase RB8189 PF00271 Helicase conserved C-terminal domain RB8189 PF03880 DbpA RNA binding domain RB8194 PF07596 RB8194 RB8194 PF13633 Prokaryotic N-terminal methylation site RB8199 PF07596 RB8199 RB8199 PF13544 RB8199 RB82 PF01841 Transglutaminase-like superfamily RB8205 PF02245 Methylpurine-DNA glycosylase (MPG) RB8208 PF01979 Amidohydrolase family RB8209 PF02517 CAAX protease self-immunity RB8210 PF00005 ABC transporter RB8217 PF14385 RB8217 RB8219 PF00155 Aminotransferase class I and II RB8221 PF01053 Cys/Met metabolism PLP-dependent enzyme RB8222 PF00561 alpha/beta hydrolase fold RB8222 PF07021 Methionine biosynthesis protein MetW RB8223 PF07596 RB8223 RB8223 PF13633 Prokaryotic N-terminal methylation site RB8233 PF00762 Ferrochelatase RB8236 PF07876 Stress responsive A/B Barrel Domain RB8238 PF00578 AhpC/TSA family RB8238 PF10417 C-terminal domain of 1-Cys peroxiredoxin RB8240 PF02096 60Kd inner membrane protein RB8240 PF13180 PDZ domain RB8240 PF14849 YidC periplasmic domain RB8243 PF07621 RB8243 RB8246 PF00188 Cysteine-rich secretory protein family RB8248 PF01738 Dienelactone hydrolase family RB8253 PF00152 tRNA synthetases class II (D, K and N) RB8253 PF01336 OB-fold nucleic acid binding domain RB8253 PF02938 GAD domain RB8254 PF00582 Universal stress protein family RB8254 PF13520 Amino acid permease RB8260 PF02594 Uncharacterised ACR, YggU family COG1872 RB8262 PF00171 Aldehyde dehydrogenase family RB8262 PF01619 Proline dehydrogenase RB8265 PF13279 Thioesterase-like superfamily RB8266 PF01261 Xylose isomerase-like TIM barrel RB8268 PF01795 MraW methylase family RB8274 PF00498 FHA domain RB8274 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB8274 PF13185 GAF domain RB8284 PF01368 DHH family RB8284 PF02272 DHHA1 domain RB8286 PF01687 Riboflavin kinase RB8286 PF06574 FAD synthetase RB8287 PF01256 Carbohydrate kinase RB8290 PF02080 TrkA-C domain RB8290 PF02254 TrkA-N domain RB8290 PF07885 Ion channel RB8291 PF00731 AIR carboxylase RB8293 PF00764 Arginosuccinate synthase RB8295 PF07596 RB8295 RB8300 PF02580 D-Tyr-tRNA(Tyr) deacylase RB8301 PF04307 RB8301 RB8306 PF02674 RB8306 RB8310 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RB8311 PF00069 Protein kinase domain RB8313 PF00534 Glycosyl transferases group 1 RB8313 PF13579 Glycosyl transferase 4-like domain RB8316 PF04539 Sigma-70 region 3 RB8316 PF04542 Sigma-70 region 2 RB8316 PF04545 Sigma-70, region 4 RB832 PF00873 AcrB/AcrD/AcrF family RB8320 PF00448 SRP54-type protein, GTPase domain RB8323 PF00771 FHIPEP family RB8326 PF00069 Protein kinase domain RB8328 PF01336 OB-fold nucleic acid binding domain RB8328 PF01966 HD domain RB8329 PF06508 Queuosine biosynthesis protein QueC RB8343 PF00206 Lyase RB8343 PF10397 Adenylosuccinate lyase C-terminus RB8345 PF07642 RB8345 RB835 PF13437 HlyD family secretion protein RB8350 PF07642 RB8350 RB8359 PF02686 Glu-tRNAGln amidotransferase C subunit RB8362 PF13672 Protein phosphatase 2C RB8363 PF01546 Peptidase family M20/M25/M40 RB8363 PF07687 Peptidase dimerisation domain RB8368 PF00581 Rhodanese-like domain RB8370 PF07635 RB8370 RB8374 PF00117 Glutamine amidotransferase class-I RB8374 PF00958 GMP synthase C terminal domain RB8374 PF02540 NAD synthase RB8375 PF00005 ABC transporter RB8375 PF12848 ABC transporter RB838 PF00440 Bacterial regulatory proteins, tetR family RB838 PF09209 Domain of unknown function (DUF1956) RB8383 PF00343 Carbohydrate phosphorylase RB8384 PF13546 RB8384 RB8394 PF06067 RB8394 RB8396 PF00271 Helicase conserved C-terminal domain RB8396 PF04851 Type III restriction enzyme, res subunit RB8397 PF00271 Helicase conserved C-terminal domain RB8397 PF02151 UvrB/uvrC motif RB8397 PF04851 Type III restriction enzyme, res subunit RB8397 PF12344 Ultra-violet resistance protein B RB8399 PF00265 Thymidine kinase RB8402 PF00575 S1 RNA binding domain RB8402 PF00773 RNB domain RB8402 PF08206 Ribonuclease B OB domain RB8404 PF02146 Sir2 family RB8406 PF06445 GyrI-like small molecule binding domain RB8406 PF10604 Polyketide cyclase / dehydrase and lipid transport RB8407 PF03372 Endonuclease/Exonuclease/phosphatase family RB841 PF00082 Subtilase family RB8411 PF01381 Helix-turn-helix RB8418 PF00271 Helicase conserved C-terminal domain RB8418 PF04851 Type III restriction enzyme, res subunit RB8423 PF00884 Sulfatase RB8430 PF01566 RB8430 RB8432 PF02627 Carboxymuconolactone decarboxylase family RB8437 PF07583 RB8437 RB8437 PF07587 RB8437 RB8437 PF07635 RB8437 RB844 PF00404 Dockerin type I repeat RB844 PF07595 RB844 RB8440 PF07394 RB8440 RB8441 PF05569 BlaR1 peptidase M56 RB8445 PF03965 Penicillinase repressor RB8450 PF00578 AhpC/TSA family RB8455 PF01467 Cytidylyltransferase RB8456 PF05685 Putative restriction endonuclease RB8459 PF01084 Ribosomal protein S18 RB8462 PF03061 Thioesterase superfamily RB8465 PF01475 Ferric uptake regulator family RB8469 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RB8469 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RB8472 PF00474 Sodium:solute symporter family RB8476 PF13616 PPIC-type PPIASE domain RB8479 PF11958 Domain of unknown function (DUF3472) RB8479 PF16871 RB8479 RB8482 PF02666 RB8482 RB8484 PF03795 YCII-related domain RB8485 PF04542 Sigma-70 region 2 RB8485 PF08281 Sigma-70, region 4 RB8487 PF04972 BON domain RB8492 PF04542 Sigma-70 region 2 RB8492 PF08281 Sigma-70, region 4 RB8494 PF06750 RB8494 RB850 PF07639 RB850 RB8501 PF13088 BNR repeat-like domain RB8505 PF13360 PQQ-like domain RB8510 PF00742 Homoserine dehydrogenase RB8510 PF01842 ACT domain RB8510 PF03447 Homoserine dehydrogenase, NAD binding domain RB8515 PF14229 RB8515 RB8516 PF02321 Outer membrane efflux protein RB8522 PF00588 SpoU rRNA Methylase family RB8524 PF00501 AMP-binding enzyme RB8527 PF07596 RB8527 RB8527 PF13544 RB8527 RB8531 PF00902 Sec-independent protein translocase protein (TatC) RB8533 PF01965 DJ-1/PfpI family RB8540 PF00583 Acetyltransferase (GNAT) family RB8541 PF05343 M42 glutamyl aminopeptidase RB8542 PF00406 Adenylate kinase RB8543 PF01411 tRNA synthetases class II (A) RB8543 PF02272 DHHA1 domain RB8543 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RB8547 PF00557 Metallopeptidase family M24 RB8547 PF01321 Creatinase/Prolidase N-terminal domain RB8548 PF00364 Biotin-requiring enzyme RB8550 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RB8550 PF02785 Biotin carboxylase C-terminal domain RB8550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RB8551 PF01370 NAD dependent epimerase/dehydratase family RB8553 PF04542 Sigma-70 region 2 RB8555 PF00069 Protein kinase domain RB856 PF00056 lactate/malate dehydrogenase, NAD binding domain RB856 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RB8561 PF09594 RB8561 RB8562 PF01676 Metalloenzyme superfamily RB8562 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RB8563 PF01152 Bacterial-like globin RB8565 PF01261 Xylose isomerase-like TIM barrel RB8574 PF04371 Porphyromonas-type peptidyl-arginine deiminase RB8580 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RB8584 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RB8588 PF00381 PTS HPr component phosphorylation site RB8591 PF00391 PEP-utilising enzyme, mobile domain RB8591 PF02896 PEP-utilising enzyme, TIM barrel domain RB8591 PF05524 PEP-utilising enzyme, N-terminal RB8592 PF10105 RB8592 RB8595 PF00575 S1 RNA binding domain RB8595 PF10150 Ribonuclease E/G family RB8596 PF00884 Sulfatase RB8596 PF16347 RB8596 RB8597 PF00884 Sulfatase RB8598 PF00384 Molybdopterin oxidoreductase RB8598 PF01568 Molydopterin dinucleotide binding domain RB8604 PF01578 RB8604 RB8604 PF05140 RB8604 RB861 PF01618 RB861 RB8612 PF13649 Methyltransferase domain RB8613 PF13507 CobB/CobQ-like glutamine amidotransferase domain RB8615 PF00578 AhpC/TSA family RB8615 PF13620 Carboxypeptidase regulatory-like domain RB8628 PF05685 Putative restriction endonuclease RB8629 PF05685 Putative restriction endonuclease RB8633 PF00202 Aminotransferase class-III RB8635 PF00149 Calcineurin-like phosphoesterase RB8637 PF00300 Histidine phosphatase superfamily (branch 1) RB8639 PF13360 PQQ-like domain RB8644 PF01878 EVE domain RB8649 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RB865 PF12728 Helix-turn-helix domain RB8651 PF01882 RB8651 RB8674 PF00578 AhpC/TSA family RB8677 PF06745 KaiC RB8679 PF01593 Flavin containing amine oxidoreductase RB8680 PF00753 Metallo-beta-lactamase superfamily RB8680 PF07521 RNA-metabolising metallo-beta-lactamase RB8680 PF10996 Beta-Casp domain RB8684 PF07755 Protein of unknown function (DUF1611) RB8686 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RB8686 PF13378 Enolase C-terminal domain-like RB8687 PF00144 Beta-lactamase RB8687 PF01427 D-ala-D-ala dipeptidase RB8693 PF00005 ABC transporter RB8695 PF00392 Bacterial regulatory proteins, gntR family RB870 PF07596 RB870 RB870 PF13633 Prokaryotic N-terminal methylation site RB8701 PF04542 Sigma-70 region 2 RB8701 PF08281 Sigma-70, region 4 RB8707 PF00482 Type II secretion system (T2SS), protein F RB871 PF13432 Tetratricopeptide repeat RB8711 PF00482 Type II secretion system (T2SS), protein F RB8718 PF07596 RB8718 RB8718 PF13633 Prokaryotic N-terminal methylation site RB8722 PF01797 Transposase IS200 like RB8725 PF00471 Ribosomal protein L33 RB8726 PF01368 DHH family RB8728 PF13561 Enoyl-(Acyl carrier protein) reductase RB8731 PF00294 pfkB family carbohydrate kinase RB8738 PF14478 Domain of unknown function (DUF4430) RB874 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB8741 PF07736 Chorismate mutase type I RB8745 PF00158 Sigma-54 interaction domain RB8745 PF02954 Bacterial regulatory protein, Fis family RB8745 PF16697 RB8745 RB8746 PF05099 Tellurite resistance protein TerB RB8747 PF04127 DNA / pantothenate metabolism flavoprotein RB8748 PF01180 Dihydroorotate dehydrogenase RB8750 PF07081 Protein of unknown function (DUF1349) RB8752 PF07081 Protein of unknown function (DUF1349) RB8754 PF07719 Tetratricopeptide repeat RB8754 PF13584 RB8754 RB8759 PF13519 von Willebrand factor type A domain RB8763 PF00092 von Willebrand factor type A domain RB8763 PF07584 RB8763 RB8767 PF01882 RB8767 RB8768 PF07726 ATPase family associated with various cellular activities (AAA) RB8770 PF01145 SPFH domain / Band 7 family RB8773 PF01145 SPFH domain / Band 7 family RB8777 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RB8777 PF07497 Rho termination factor, RNA-binding domain RB8779 PF03313 RB8779 RB8779 PF03315 Serine dehydratase beta chain RB878 PF13435 Cytochrome c554 and c-prime RB8781 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB8783 PF03372 Endonuclease/Exonuclease/phosphatase family RB8788 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RB8788 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RB8789 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB8792 PF12566 RB8792 RB8796 PF00392 Bacterial regulatory proteins, gntR family RB8796 PF07729 FCD domain RB8797 PF00474 Sodium:solute symporter family RB8798 PF00701 Dihydrodipicolinate synthetase family RB8799 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB8799 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RB88 PF09423 PhoD-like phosphatase RB8806 PF01242 6-pyruvoyl tetrahydropterin synthase RB8807 PF04367 RB8807 RB8816 PF04542 Sigma-70 region 2 RB8820 PF00072 Response regulator receiver domain RB8820 PF02599 Global regulator protein family RB8823 PF00756 Putative esterase RB8824 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RB8827 PF03109 RB8827 RB8833 PF02535 RB8833 RB8834 PF01545 Cation efflux family RB8835 PF09423 PhoD-like phosphatase RB8838 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase RB8840 PF00708 Acylphosphatase RB8841 PF00521 DNA gyrase/topoisomerase IV, subunit A RB8841 PF03989 DNA gyrase C-terminal domain, beta-propeller RB8843 PF00004 ATPase family associated with various cellular activities (AAA) RB8848 PF13649 Methyltransferase domain RB885 PF07585 RB885 RB8851 PF01557 Fumarylacetoacetate (FAA) hydrolase family RB8853 PF00195 Chalcone and stilbene synthases, N-terminal domain RB8853 PF02797 Chalcone and stilbene synthases, C-terminal domain RB8854 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB8857 PF13649 Methyltransferase domain RB8859 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RB8859 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RB886 PF00028 Cadherin domain RB886 PF07595 RB886 RB8861 PF01790 RB8861 RB8870 PF01883 Domain of unknown function DUF59 RB8870 PF10609 ParA/MinD ATPase like RB8871 PF13561 Enoyl-(Acyl carrier protein) reductase RB8872 PF00230 Major intrinsic protein RB8873 PF00072 Response regulator receiver domain RB8873 PF00512 His Kinase A (phospho-acceptor) domain RB8873 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB8873 PF05227 CHASE3 domain RB8873 PF08447 PAS fold RB8882 PF07596 RB8882 RB8882 PF13544 RB8882 RB8885 PF05787 Bacterial protein of unknown function (DUF839) RB8889 PF09423 PhoD-like phosphatase RB8889 PF16655 RB8889 RB8892 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB8892 PF13472 GDSL-like Lipase/Acylhydrolase family RB8895 PF13088 BNR repeat-like domain RB89 PF12697 Alpha/beta hydrolase family RB8901 PF13036 Protein of unknown function (DUF3897) RB8904 PF01370 NAD dependent epimerase/dehydratase family RB8905 PF00535 Glycosyl transferase family 2 RB8909 PF01895 PhoU domain RB8909 PF02690 RB8909 RB8913 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RB8919 PF00133 tRNA synthetases class I (I, L, M and V) RB8919 PF08264 Anticodon-binding domain of tRNA RB8919 PF13603 Leucyl-tRNA synthetase, Domain 2 RB8921 PF01757 RB8921 RB8924 PF01676 Metalloenzyme superfamily RB8924 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase RB8926 PF00696 Amino acid kinase family RB8926 PF13840 ACT domain RB8927 PF00034 Cytochrome c RB8927 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB8928 PF01553 Acyltransferase RB8929 PF00069 Protein kinase domain RB893 PF13620 Carboxypeptidase regulatory-like domain RB8932 PF09837 Uncharacterized protein conserved in bacteria (DUF2064) RB8935 PF01266 FAD dependent oxidoreductase RB8937 PF00581 Rhodanese-like domain RB8937 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RB8937 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB8939 PF12840 Helix-turn-helix domain RB8941 PF00171 Aldehyde dehydrogenase family RB8945 PF07596 RB8945 RB8966 PF00118 TCP-1/cpn60 chaperonin family RB8969 PF00166 Chaperonin 10 Kd subunit RB8970 PF00118 TCP-1/cpn60 chaperonin family RB8972 PF00226 DnaJ domain RB8972 PF00684 DnaJ central domain RB8972 PF01556 DnaJ C terminal domain RB8974 PF01025 GrpE RB8976 PF09723 RB8976 RB8978 PF12706 Beta-lactamase superfamily domain RB8979 PF03313 RB8979 RB898 PF07394 RB898 RB8980 PF07596 RB8980 RB8983 PF07726 ATPase family associated with various cellular activities (AAA) RB8985 PF04480 Protein of unknown function (DUF559) RB8988 PF01882 RB8988 RB8992 PF07584 RB8992 RB900 PF07583 RB900 RB900 PF07587 RB900 RB900 PF07635 RB900 RB9012 PF00578 AhpC/TSA family RB9015 PF07625 RB9015 RB9017 PF04542 Sigma-70 region 2 RB9019 PF00069 Protein kinase domain RB9026 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB9029 PF01431 Peptidase family M13 RB9029 PF05649 Peptidase family M13 RB9039 PF07394 RB9039 RB9042 PF07583 RB9042 RB9042 PF07587 RB9042 RB9042 PF07635 RB9042 RB9047 PF07585 RB9047 RB9053 PF01345 RB9053 RB9053 PF05738 Cna protein B-type domain RB9063 PF07585 RB9063 RB9066 PF07593 RB9066 RB9066 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB9070 PF07596 RB9070 RB9070 PF13633 Prokaryotic N-terminal methylation site RB9073 PF07593 RB9073 RB9073 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB9076 PF00005 ABC transporter RB9076 PF12848 ABC transporter RB9076 PF16326 RB9076 RB9078 PF00676 Dehydrogenase E1 component RB9078 PF02779 Transketolase, pyrimidine binding domain RB9078 PF16078 RB9078 RB9078 PF16870 RB9078 RB908 PF04773 FecR protein RB9080 PF12697 Alpha/beta hydrolase family RB9083 PF02834 LigT like Phosphoesterase RB9084 PF00814 Glycoprotease family RB9087 PF13430 RB9087 RB9089 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RB9090 PF02548 Ketopantoate hydroxymethyltransferase RB9091 PF00884 Sulfatase RB9094 PF00483 Nucleotidyl transferase RB9096 PF01704 UTP--glucose-1-phosphate uridylyltransferase RB9101 PF04264 YceI-like domain RB9103 PF00004 ATPase family associated with various cellular activities (AAA) RB9103 PF02861 Clp amino terminal domain RB9103 PF07724 AAA domain (Cdc48 subfamily) RB9103 PF10431 C-terminal, D2-small domain, of ClpB protein RB9105 PF00012 Hsp70 protein RB9107 PF00800 Prephenate dehydratase RB9108 PF07726 ATPase family associated with various cellular activities (AAA) RB9109 PF00204 DNA gyrase B RB9109 PF00986 DNA gyrase B subunit, carboxyl terminus RB9109 PF01751 Toprim domain RB9109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB9110 PF13360 PQQ-like domain RB9113 PF01965 DJ-1/PfpI family RB9115 PF02021 Uncharacterised protein family UPF0102 RB9116 PF01546 Peptidase family M20/M25/M40 RB9116 PF07687 Peptidase dimerisation domain RB9119 PF00571 CBS domain RB9119 PF01769 Divalent cation transporter RB9119 PF03448 MgtE intracellular N domain RB912 PF04542 Sigma-70 region 2 RB912 PF08281 Sigma-70, region 4 RB9120 PF00034 Cytochrome c RB9120 PF02837 Glycosyl hydrolases family 2, sugar binding domain RB9120 PF13646 HEAT repeats RB9128 PF10755 RB9128 RB913 PF04230 RB913 RB9132 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB9132 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RB9133 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RB9134 PF00579 tRNA synthetases class I (W and Y) RB9134 PF01479 S4 domain RB9136 PF00331 Glycosyl hydrolase family 10 RB9141 PF05175 Methyltransferase small domain RB9146 PF13204 Protein of unknown function (DUF4038) RB9146 PF16586 RB9146 RB9156 PF07593 RB9156 RB9156 PF13432 Tetratricopeptide repeat RB9156 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB9159 PF07596 RB9159 RB9164 PF00578 AhpC/TSA family RB9168 PF16363 RB9168 RB9169 PF02350 UDP-N-acetylglucosamine 2-epimerase RB9174 PF07596 RB9174 RB9174 PF13633 Prokaryotic N-terminal methylation site RB918 PF00589 Phage integrase family RB9183 PF02563 Polysaccharide biosynthesis/export protein RB9183 PF10531 SLBB domain RB9188 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RB9188 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RB9190 PF00111 2Fe-2S iron-sulfur cluster binding domain RB9191 PF07625 RB9191 RB9192 PF00884 Sulfatase RB9196 PF06439 Domain of Unknown Function (DUF1080) RB92 PF09423 PhoD-like phosphatase RB92 PF13385 Concanavalin A-like lectin/glucanases superfamily RB9200 PF13242 HAD-hyrolase-like RB9200 PF13344 Haloacid dehalogenase-like hydrolase RB9201 PF00207 Alpha-2-macroglobulin family RB9201 PF01835 MG2 domain RB9208 PF01925 RB9208 RB9210 PF00266 Aminotransferase class-V RB9215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RB9215 PF00364 Biotin-requiring enzyme RB9215 PF02817 e3 binding domain RB9216 PF12796 Ankyrin repeats (3 copies) RB9216 PF13637 Ankyrin repeats (many copies) RB9218 PF03853 YjeF-related protein N-terminus RB9222 PF13180 PDZ domain RB9222 PF13899 Thioredoxin-like RB9232 PF07592 RB9232 RB9235 PF05050 Methyltransferase FkbM domain RB9237 PF00535 Glycosyl transferase family 2 RB9238 PF01531 RB9238 RB9239 PF05050 Methyltransferase FkbM domain RB9241 PF05050 Methyltransferase FkbM domain RB9245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RB925 PF04986 RB925 RB925 PF14319 RB925 RB9255 PF01134 Glucose inhibited division protein A RB9255 PF13932 GidA associated domain 3 RB9260 PF13620 Carboxypeptidase regulatory-like domain RB9262 PF00171 Aldehyde dehydrogenase family RB9268 PF06289 RB9268 RB9269 PF01618 RB9269 RB927 PF00589 Phage integrase family RB9271 PF00691 OmpA family RB9271 PF13677 RB9271 RB9275 PF01052 Surface presentation of antigens (SPOA) RB9276 PF04347 RB9276 RB9278 PF00875 DNA photolyase RB9278 PF13450 NAD(P)-binding Rossmann-like domain RB9280 PF01593 Flavin containing amine oxidoreductase RB9283 PF00494 Squalene/phytoene synthase RB9284 PF00494 Squalene/phytoene synthase RB9288 PF02401 LytB protein RB9289 PF07593 RB9289 RB9289 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella RB9292 PF00128 Alpha amylase, catalytic domain RB9292 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RB9298 PF07596 RB9298 RB9298 PF13633 Prokaryotic N-terminal methylation site RB9304 PF01197 Ribosomal protein L31 RB9305 PF00472 RF-1 domain RB9305 PF03462 PCRF domain RB9306 PF05175 Methyltransferase small domain RB9308 PF02321 Outer membrane efflux protein RB9311 PF13533 Biotin-lipoyl like RB9313 PF13533 Biotin-lipoyl like RB9313 PF16576 RB9313 RB9315 PF13437 HlyD family secretion protein RB9317 PF00069 Protein kinase domain RB9317 PF00400 WD domain, G-beta repeat RB9326 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RB9329 PF00400 WD domain, G-beta repeat RB9330 PF05738 Cna protein B-type domain RB9330 PF07595 RB9330 RB9330 PF13620 Carboxypeptidase regulatory-like domain RB9338 PF08714 Formaldehyde-activating enzyme (Fae) RB934 PF04986 RB934 RB934 PF14319 RB934 RB9340 PF13646 HEAT repeats RB9344 PF00176 SNF2 family N-terminal domain RB9344 PF00271 Helicase conserved C-terminal domain RB9345 PF07636 RB9345 RB9353 PF00376 MerR family regulatory protein RB9356 PF07617 RB9356 RB9359 PF01137 RNA 3'-terminal phosphate cyclase RB9360 PF01139 tRNA-splicing ligase RtcB RB9364 PF00158 Sigma-54 interaction domain RB9364 PF06956 RB9364 RB9366 PF13593 SBF-like CPA transporter family (DUF4137) RB9367 PF01261 Xylose isomerase-like TIM barrel RB9372 PF00117 Glutamine amidotransferase class-I RB9374 PF00270 DEAD/DEAH box helicase RB9374 PF00271 Helicase conserved C-terminal domain RB9374 PF16124 RB9374 RB9376 PF00028 Cadherin domain RB9376 PF00404 Dockerin type I repeat RB9382 PF13180 PDZ domain RB9382 PF13365 Trypsin-like peptidase domain RB9384 PF02653 RB9384 RB9385 PF00005 ABC transporter RB9386 PF00578 AhpC/TSA family RB9390 PF03958 Bacterial type II/III secretion system short domain RB9395 PF03176 MMPL family RB940 PF15892 RB940 RB9401 PF00919 Uncharacterized protein family UPF0004 RB9401 PF01938 TRAM domain RB9401 PF04055 Radical SAM superfamily RB9402 PF00675 Insulinase (Peptidase family M16) RB9402 PF05193 Peptidase M16 inactive domain RB9404 PF00675 Insulinase (Peptidase family M16) RB9404 PF05193 Peptidase M16 inactive domain RB941 PF12831 FAD dependent oxidoreductase RB9411 PF01609 Transposase DDE domain RB9418 PF00512 His Kinase A (phospho-acceptor) domain RB9418 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB9418 PF03924 CHASE domain RB9418 PF13426 PAS domain RB9420 PF00005 ABC transporter RB9420 PF00664 ABC transporter transmembrane region RB9421 PF07584 RB9421 RB9421 PF07705 CARDB RB9421 PF13519 von Willebrand factor type A domain RB9424 PF01882 RB9424 RB9427 PF00092 von Willebrand factor type A domain RB9428 PF00512 His Kinase A (phospho-acceptor) domain RB9428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RB9431 PF00072 Response regulator receiver domain RB9431 PF00486 Transcriptional regulatory protein, C terminal RB9433 PF05685 Putative restriction endonuclease RB9435 PF00069 Protein kinase domain RB9435 PF07596 RB9435 RB9437 PF04542 Sigma-70 region 2 RB9439 PF06439 Domain of Unknown Function (DUF1080) RB9439 PF07691 PA14 domain RB9439 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB9442 PF04734 Neutral/alkaline non-lysosomal ceramidase RB9445 PF01925 RB9445 RB9447 PF00583 Acetyltransferase (GNAT) family RB9448 PF09685 RB9448 RB945 PF02652 RB945 RB9469 PF07635 RB9469 RB9470 PF02503 Polyphosphate kinase middle domain RB9470 PF13089 Polyphosphate kinase N-terminal domain RB9470 PF13090 Polyphosphate kinase C-terminal domain RB9477 PF00005 ABC transporter RB9478 PF10672 S-adenosylmethionine-dependent methyltransferase RB9480 PF07596 RB9480 RB9484 PF13454 FAD-NAD(P)-binding RB9486 PF01047 MarR family RB9488 PF03601 RB9488 RB9493 PF13508 Acetyltransferase (GNAT) domain RB9494 PF02678 Pirin RB9494 PF05726 Pirin C-terminal cupin domain RB9498 PF00884 Sulfatase RB9498 PF14707 C-terminal region of aryl-sulfatase RB9499 PF07726 ATPase family associated with various cellular activities (AAA) RB950 PF13520 Amino acid permease RB9500 PF01882 RB9500 RB9501 PF14316 RB9501 RB9502 PF00092 von Willebrand factor type A domain RB9504 PF13519 von Willebrand factor type A domain RB9505 PF07719 Tetratricopeptide repeat RB9506 PF13584 RB9506 RB9508 PF04966 Carbohydrate-selective porin, OprB family RB9518 PF03983 SLA1 homology domain 1, SHD1 RB9520 PF02530 RB9520 RB9522 PF11742 RB9522 RB9526 PF13533 Biotin-lipoyl like RB9526 PF16576 RB9526 RB9530 PF00884 Sulfatase RB9530 PF14707 C-terminal region of aryl-sulfatase RB9533 PF13091 PLD-like domain RB9533 PF13396 RB9533 RB9535 PF13520 Amino acid permease RB9536 PF07885 Ion channel RB9541 PF16576 RB9541 RB9542 PF00873 AcrB/AcrD/AcrF family RB9543 PF01594 RB9543 RB9546 PF01738 Dienelactone hydrolase family RB9549 PF00884 Sulfatase RB9550 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RB9551 PF02374 Anion-transporting ATPase RB9555 PF06953 Arsenical resistance operon trans-acting repressor ArsD RB956 PF04986 RB956 RB956 PF14319 RB956 RB9561 PF04542 Sigma-70 region 2 RB9561 PF08281 Sigma-70, region 4 RB9563 PF04773 FecR protein RB9565 PF00561 alpha/beta hydrolase fold RB9567 PF07080 Protein of unknown function (DUF1348) RB9569 PF02627 Carboxymuconolactone decarboxylase family RB957 PF00589 Phage integrase family RB9570 PF00158 Sigma-54 interaction domain RB9570 PF13185 GAF domain RB9572 PF00034 Cytochrome c RB9574 PF13561 Enoyl-(Acyl carrier protein) reductase RB9581 PF01638 HxlR-like helix-turn-helix RB9584 PF08240 Alcohol dehydrogenase GroES-like domain RB9584 PF13602 Zinc-binding dehydrogenase RB9585 PF00296 Luciferase-like monooxygenase RB9586 PF00106 short chain dehydrogenase RB9587 PF04434 RB9587 RB9588 PF10021 Uncharacterized protein conserved in bacteria (DUF2263) RB9591 PF10127 RB9591 RB9592 PF10127 RB9592 RB9593 PF07583 RB9593 RB9593 PF07587 RB9593 RB9598 PF07394 RB9598 RB9604 PF07635 RB9604 RB9604 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RB9606 PF03983 SLA1 homology domain 1, SHD1 RB9610 PF07993 Male sterility protein RB9611 PF00005 ABC transporter RB9611 PF02687 RB9611 RB9611 PF12704 MacB-like periplasmic core domain RB9612 PF00005 ABC transporter RB9612 PF00664 ABC transporter transmembrane region RB9614 PF04488 Glycosyltransferase sugar-binding region containing DXD motif RB9617 PF00534 Glycosyl transferases group 1 RB962 PF13495 Phage integrase, N-terminal SAM-like domain RB9620 PF14907 Uncharacterised nucleotidyltransferase RB9623 PF00535 Glycosyl transferase family 2 RB9625 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RB9627 PF13692 Glycosyl transferases group 1 RB9629 PF00487 RB9629 RB9631 PF00668 Condensation domain RB9637 PF00535 Glycosyl transferase family 2 RB9640 PF13506 Glycosyl transferase family 21 RB9643 PF16576 RB9643 RB9646 PF02321 Outer membrane efflux protein RB9648 PF13641 Glycosyltransferase like family 2 RB9650 PF00884 Sulfatase RB9650 PF16347 RB9650 RB9651 PF03629 Domain of unknown function (DUF303) RB9654 PF01515 Phosphate acetyl/butaryl transferase RB9654 PF07085 DRTGG domain RB9654 PF13500 AAA domain RB9655 PF00871 Acetokinase family RB9657 PF00248 Aldo/keto reductase family RB9658 PF09905 Uncharacterized conserved protein (DUF2132) RB9659 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RB9660 PF13564 RB9660 RB9661 PF12833 Helix-turn-helix domain RB9661 PF12852 Cupin RB9664 PF08487 RB9664 RB9664 PF13768 von Willebrand factor type A domain RB9666 PF01694 Rhomboid family RB9670 PF01797 Transposase IS200 like RB9674 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RB9674 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RB9679 PF05936 RB9679 RB9684 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) RB9685 PF14331 RB9685 RB9687 PF06812 RB9687 RB9689 PF05591 RB9689 RB9690 PF05943 RB9690 RB9692 PF05638 Protein of unknown function (DUF796) RB9693 PF04965 Gene 25-like lysozyme RB9696 PF05947 RB9696 RB9698 PF06996 RB9698 RB9699 PF05954 Phage late control gene D protein (GPD) RB9702 PF05488 PAAR motif RB971 PF01734 Patatin-like phospholipase RB9713 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB9722 PF01161 Phosphatidylethanolamine-binding protein RB9722 PF14240 RB9722 RB9728 PF04542 Sigma-70 region 2 RB9728 PF08281 Sigma-70, region 4 RB973 PF00884 Sulfatase RB973 PF13472 GDSL-like Lipase/Acylhydrolase family RB973 PF16347 RB973 RB9732 PF00756 Putative esterase RB9732 PF08450 SMP-30/Gluconolaconase/LRE-like region RB974 PF02639 RB974 RB9745 PF00069 Protein kinase domain RB9748 PF01180 Dihydroorotate dehydrogenase RB9751 PF06283 Trehalose utilisation RB9755 PF00884 Sulfatase RB9765 PF00082 Subtilase family RB9766 PF00004 ATPase family associated with various cellular activities (AAA) RB977 PF01979 Amidohydrolase family RB977 PF07969 Amidohydrolase family RB9771 PF00929 Exonuclease RB9790 PF01230 HIT domain RB9791 PF04002 RadC-like JAB domain RB9794 PF00543 Nitrogen regulatory protein P-II RB9795 PF01118 Semialdehyde dehydrogenase, NAD binding domain RB9795 PF02774 Semialdehyde dehydrogenase, dimerisation domain RB9798 PF13443 Cro/C1-type HTH DNA-binding domain RB9808 PF01078 Magnesium chelatase, subunit ChlI RB9808 PF13335 RB9808 RB9808 PF13541 Subunit ChlI of Mg-chelatase RB981 PF01979 Amidohydrolase family RB9810 PF01609 Transposase DDE domain RB9821 PF08282 haloacid dehalogenase-like hydrolase RB9823 PF00571 CBS domain RB9823 PF01380 SIS domain RB9826 PF06271 RB9826 RB983 PF13360 PQQ-like domain RB9832 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RB9832 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RB9832 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RB9832 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RB9834 PF07969 Amidohydrolase family RB9835 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase RB9835 PF02741 FTR, proximal lobe RB9836 PF01493 GXGXG motif RB9840 PF00753 Metallo-beta-lactamase superfamily RB9840 PF03772 RB9840 RB9840 PF13567 RB9840 RB9844 PF01578 RB9844 RB9848 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RB9848 PF01488 Shikimate / quinate 5-dehydrogenase RB9848 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RB9849 PF06439 Domain of Unknown Function (DUF1080) RB9852 PF04542 Sigma-70 region 2 RB9852 PF08281 Sigma-70, region 4 RB9854 PF00069 Protein kinase domain RB9855 PF13231 RB9855 RB9857 PF00809 Pterin binding enzyme RB9857 PF02310 B12 binding domain RB9857 PF02574 Homocysteine S-methyltransferase RB9857 PF02607 B12 binding domain RB9857 PF02965 Vitamin B12 dependent methionine synthase, activation domain RB9860 PF04909 Amidohydrolase RB9867 PF14063 RB9867 RB9869 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RB9869 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain RB9871 PF01842 ACT domain RB9871 PF10369 Small subunit of acetolactate synthase RB9874 PF02616 ScpA/B protein RB9876 PF04055 Radical SAM superfamily RB9876 PF06969 HemN C-terminal domain RB9879 PF08448 PAS fold RB9879 PF12833 Helix-turn-helix domain RB988 PF14080 RB988 RB9884 PF07583 RB9884 RB9884 PF07587 RB9884 RB9884 PF07635 RB9884 RB9884 PF13385 Concanavalin A-like lectin/glucanases superfamily RB9886 PF07394 RB9886 RB9886 PF07640 RB9886 RB9890 PF07992 Pyridine nucleotide-disulphide oxidoreductase RB9892 PF01654 RB9892 RB9894 PF02322 RB9894 RB9895 PF07196 Flagellin hook IN motif RB9898 PF01965 DJ-1/PfpI family RB990 PF07690 Major Facilitator Superfamily RB9905 PF01609 Transposase DDE domain RB9905 PF13340 RB9905 RB9907 PF13546 RB9907 RB9911 PF00331 Glycosyl hydrolase family 10 RB9916 PF01281 Ribosomal protein L9, N-terminal domain RB9916 PF03948 Ribosomal protein L9, C-terminal domain RB9917 PF00436 Single-strand binding protein family RB9920 PF01250 Ribosomal protein S6 RB9922 PF01195 Peptidyl-tRNA hydrolase RB9923 PF01386 Ribosomal L25p family RB9923 PF14693 Ribosomal protein TL5, C-terminal domain RB9927 PF06689 ClpX C4-type zinc finger RB9927 PF07724 AAA domain (Cdc48 subfamily) RB9927 PF10431 C-terminal, D2-small domain, of ClpB protein RB993 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RB9932 PF01261 Xylose isomerase-like TIM barrel RB9937 PF07690 Major Facilitator Superfamily RB9942 PF10119 RB9942 RB9942 PF13847 Methyltransferase domain RB9943 PF01773 Na+ dependent nucleoside transporter N-terminus RB9943 PF07662 Na+ dependent nucleoside transporter C-terminus RB9943 PF07670 Nucleoside recognition RB9945 PF06283 Trehalose utilisation RB9948 PF12867 DinB superfamily RB9950 PF00404 Dockerin type I repeat RB9950 PF03160 Calx-beta domain RB9952 PF01975 Survival protein SurE RB9953 PF02696 RB9953 RB9955 PF07586 RB9955 RB9957 PF07627 RB9957 RB9957 PF07631 RB9957 RB9957 PF07691 PA14 domain RB9957 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RB9966 PF04055 Radical SAM superfamily RB9966 PF13353 4Fe-4S single cluster domain RB997 PF00376 MerR family regulatory protein RB997 PF13432 Tetratricopeptide repeat RB9971 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB9973 PF07640 RB9973 RB9973 PF09492 Pectic acid lyase RB9979 PF00488 MutS domain V RB9982 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RB9983 PF01238 Phosphomannose isomerase type I RB9985 PF09970 RB9985 RB9992 PF01458 Uncharacterized protein family (UPF0051) RB9995 PF01458 Uncharacterized protein family (UPF0051) RB9998 PF00005 ABC transporter RB9999 PF13463 Winged helix DNA-binding domain