RB10025	SM00460	Transglutaminase/protease-like homologues
RB10027	SM00460	Transglutaminase/protease-like homologues
RB10039	SM00028	Tetratricopeptide repeats
RB10060	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RB10081	SM00382	ATPases associated with a variety of cellular activities
RB1009	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB10103	SM00612	RB10103
RB10108	SM00480	DNA polymerase III beta subunit
RB10113	SM00798	AICARFT/IMPCHase bienzyme
RB10113	SM00851	MGS-like domain
RB10119	SM00220	Serine/Threonine protein kinases, catalytic domain
RB10124	SM00564	beta-propeller repeat
RB10133	SM00220	Serine/Threonine protein kinases, catalytic domain
RB10149	SM00112	Cadherin repeats.
RB10160	SM00220	Serine/Threonine protein kinases, catalytic domain
RB10160	SM00320	WD40 repeats
RB10165	SM00460	Transglutaminase/protease-like homologues
RB10181	SM00382	ATPases associated with a variety of cellular activities
RB10196	SM00959	Rho termination factor, N-terminal domain
RB10217	SM00382	ATPases associated with a variety of cellular activities
RB10231	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
RB10242	SM00271	DnaJ molecular chaperone homology domain
RB10249	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB10275	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB10275	SM00876	Biotin and Thiamin Synthesis associated domain
RB10287	SM01130	RB10287
RB10308	SM00267	diguanylate cyclase
RB10308	SM00448	cheY-homologous receiver domain
RB10322	SM00387	Histidine kinase-like ATPases
RB10322	SM00388	His Kinase A (phosphoacceptor) domain
RB10323	SM00382	ATPases associated with a variety of cellular activities
RB10323	SM00448	cheY-homologous receiver domain
RB10329	SM00220	Serine/Threonine protein kinases, catalytic domain
RB10329	SM00448	cheY-homologous receiver domain
RB10330	SM00073	Histidine Phosphotransfer domain
RB10330	SM00387	Histidine kinase-like ATPases
RB10330	SM00388	His Kinase A (phosphoacceptor) domain
RB10330	SM00448	cheY-homologous receiver domain
RB10333	SM00220	Serine/Threonine protein kinases, catalytic domain
RB10338	SM00028	Tetratricopeptide repeats
RB10364	SM00382	ATPases associated with a variety of cellular activities
RB10367	SM00220	Serine/Threonine protein kinases, catalytic domain
RB10388	SM00220	Serine/Threonine protein kinases, catalytic domain
RB10416	SM00758	RB10416
RB10423	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
RB10423	SM00560	LamG-like jellyroll fold domain
RB10442	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB10446	SM00822	RB10446
RB10446	SM00825	Beta-ketoacyl synthase
RB10446	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RB10458	SM00360	RNA recognition motif
RB1046	SM00487	DEAD-like helicases superfamily
RB1046	SM00490	helicase superfamily c-terminal domain
RB10468	SM00316	Ribosomal protein S1-like RNA-binding domain
RB1048	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB10487	SM00487	DEAD-like helicases superfamily
RB10487	SM00490	helicase superfamily c-terminal domain
RB10487	SM00956	RB10487
RB10488	SM00073	Histidine Phosphotransfer domain
RB10488	SM00091	PAS domain
RB10488	SM00387	Histidine kinase-like ATPases
RB10488	SM00388	His Kinase A (phosphoacceptor) domain
RB10488	SM00448	cheY-homologous receiver domain
RB10491	SM00448	cheY-homologous receiver domain
RB10512	SM00460	Transglutaminase/protease-like homologues
RB10524	SM00316	Ribosomal protein S1-like RNA-binding domain
RB10541	SM00028	Tetratricopeptide repeats
RB10592	SM00878	Biotin carboxylase C-terminal domain
RB10616	SM00858	RB10616
RB10619	SM00881	CoA binding domain
RB10627	SM00883	Chaperonin 10 Kd subunit
RB1065	SM00938	Nitrogen regulatory protein P-II
RB10655	SM00342	helix_turn_helix, arabinose operon control protein
RB107	SM00564	beta-propeller repeat
RB10706	SM00564	beta-propeller repeat
RB10711	SM00292	breast cancer carboxy-terminal domain
RB10711	SM00532	Ligase N family
RB10716	SM00564	beta-propeller repeat
RB10733	SM00829	Enoylreductase
RB10770	SM00487	DEAD-like helicases superfamily
RB10770	SM00490	helicase superfamily c-terminal domain
RB10793	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RB10793	SM00382	ATPases associated with a variety of cellular activities
RB10818	SM00226	Low molecular weight phosphatase family
RB10839	SM00564	beta-propeller repeat
RB10852	SM00845	GatB domain
RB10855	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RB10880	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB10892	SM00387	Histidine kinase-like ATPases
RB10924	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB10924	SM00091	PAS domain
RB10924	SM00138	Methyltransferase, chemotaxis proteins 
RB10924	SM00387	Histidine kinase-like ATPases
RB10924	SM00388	His Kinase A (phosphoacceptor) domain
RB10924	SM00448	cheY-homologous receiver domain
RB10942	SM00028	Tetratricopeptide repeats
RB10957	SM00959	Rho termination factor, N-terminal domain
RB10967	SM00829	Enoylreductase
RB10985	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB10991	SM00347	helix_turn_helix multiple antibiotic resistance protein
RB10995	SM00220	Serine/Threonine protein kinases, catalytic domain
RB10999	SM00560	LamG-like jellyroll fold domain
RB11021	SM00382	ATPases associated with a variety of cellular activities
RB11030	SM00382	ATPases associated with a variety of cellular activities
RB11036	SM00382	ATPases associated with a variety of cellular activities
RB11036	SM00448	cheY-homologous receiver domain
RB11037	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RB11037	SM00387	Histidine kinase-like ATPases
RB11063	SM00947	Carbonic anhydrase
RB11075	SM00347	helix_turn_helix multiple antibiotic resistance protein
RB11090	SM00448	cheY-homologous receiver domain
RB11091	SM00091	PAS domain
RB11091	SM00387	Histidine kinase-like ATPases
RB11100	SM00529	Helix-turn-helix diphteria tox regulatory element
RB11118	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RB11133	SM00235	Zinc-dependent metalloprotease
RB11136	SM00028	Tetratricopeptide repeats
RB11136	SM00220	Serine/Threonine protein kinases, catalytic domain
RB11142	SM00564	beta-propeller repeat
RB11151	SM00829	Enoylreductase
RB11162	SM00776	RB11162
RB11168	SM00450	Rhodanese Homology Domain
RB11171	SM00871	Bacterial transcription activator, effector binding domain
RB11173	SM00881	CoA binding domain
RB11174	SM00450	Rhodanese Homology Domain
RB11174	SM00849	Metallo-beta-lactamase superfamily
RB1118	SM01034	Sensors of blue-light using FAD
RB11186	SM00382	ATPases associated with a variety of cellular activities
RB11186	SM00448	cheY-homologous receiver domain
RB11191	SM00091	PAS domain
RB11191	SM00387	Histidine kinase-like ATPases
RB11191	SM00448	cheY-homologous receiver domain
RB11201	SM00448	cheY-homologous receiver domain
RB11203	SM00387	Histidine kinase-like ATPases
RB11203	SM00388	His Kinase A (phosphoacceptor) domain
RB11223	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RB11225	SM00450	Rhodanese Homology Domain
RB11227	SM00450	Rhodanese Homology Domain
RB11227	SM00849	Metallo-beta-lactamase superfamily
RB11244	SM00220	Serine/Threonine protein kinases, catalytic domain
RB11321	SM00028	Tetratricopeptide repeats
RB11334	SM00220	Serine/Threonine protein kinases, catalytic domain
RB11334	SM00320	WD40 repeats
RB11366	SM00530	Helix-turn-helix XRE-family like proteins 
RB11367	SM00028	Tetratricopeptide repeats
RB11370	SM00530	Helix-turn-helix XRE-family like proteins 
RB11371	SM00487	DEAD-like helicases superfamily
RB1140	SM00421	helix_turn_helix, Lux Regulon
RB1140	SM00448	cheY-homologous receiver domain
RB11401	SM00487	DEAD-like helicases superfamily
RB11401	SM00490	helicase superfamily c-terminal domain
RB11405	SM00507	HNH nucleases
RB11407	SM00487	DEAD-like helicases superfamily
RB11462	SM00881	CoA binding domain
RB11463	SM00564	beta-propeller repeat
RB11480	SM00347	helix_turn_helix multiple antibiotic resistance protein
RB11482	SM00849	Metallo-beta-lactamase superfamily
RB11502	SM00849	Metallo-beta-lactamase superfamily
RB11516	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB11563	SM00382	ATPases associated with a variety of cellular activities
RB11579	SM00382	ATPases associated with a variety of cellular activities
RB11579	SM00760	Bacterial dnaA protein helix-turn-helix domain
RB11594	SM00448	cheY-homologous receiver domain
RB11595	SM00382	ATPases associated with a variety of cellular activities
RB11604	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RB11604	SM00387	Histidine kinase-like ATPases
RB11604	SM00388	His Kinase A (phosphoacceptor) domain
RB11622	SM00487	DEAD-like helicases superfamily
RB11654	SM00631	RB11654
RB11660	SM00564	beta-propeller repeat
RB11668	SM00387	Histidine kinase-like ATPases
RB11668	SM00388	His Kinase A (phosphoacceptor) domain
RB11669	SM00382	ATPases associated with a variety of cellular activities
RB11669	SM00448	cheY-homologous receiver domain
RB11690	SM00957	SecA DEAD-like domain
RB11690	SM00958	SecA preprotein cross-linking domain
RB11706	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB11712	SM00487	DEAD-like helicases superfamily
RB11712	SM00490	helicase superfamily c-terminal domain
RB11769	SM00112	Cadherin repeats.
RB11769	SM00237	Domains in Na-Ca exchangers and integrin-beta4
RB11817	SM00382	ATPases associated with a variety of cellular activities
RB11817	SM00843	RB11817
RB11822	SM00116	Domain in cystathionine beta-synthase and other proteins.
RB11822	SM01240	RB11822
RB11832	SM00562	RB11832
RB11859	SM00849	Metallo-beta-lactamase superfamily
RB11863	SM00382	ATPases associated with a variety of cellular activities
RB11879	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB11916	SM00460	Transglutaminase/protease-like homologues
RB11930	SM00382	ATPases associated with a variety of cellular activities
RB11947	SM00382	ATPases associated with a variety of cellular activities
RB11955	SM00220	Serine/Threonine protein kinases, catalytic domain
RB11975	SM00822	RB11975
RB11975	SM00823	Phosphopantetheine attachment site
RB11975	SM00824	Thioesterase
RB11975	SM00825	Beta-ketoacyl synthase
RB11975	SM00826	RB11975
RB11975	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RB11975	SM00829	Enoylreductase
RB11975	SM01294	RB11975
RB11976	SM00448	cheY-homologous receiver domain
RB11976	SM00862	Transcriptional regulatory protein, C terminal
RB11985	SM00829	Enoylreductase
RB11986	SM00091	PAS domain
RB11986	SM00387	Histidine kinase-like ATPases
RB11986	SM00388	His Kinase A (phosphoacceptor) domain
RB11986	SM00448	cheY-homologous receiver domain
RB11988	SM00220	Serine/Threonine protein kinases, catalytic domain
RB12013	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RB12047	SM00487	DEAD-like helicases superfamily
RB12047	SM00490	helicase superfamily c-terminal domain
RB12056	SM00028	Tetratricopeptide repeats
RB12108	SM00382	ATPases associated with a variety of cellular activities
RB12108	SM00448	cheY-homologous receiver domain
RB12113	SM00851	MGS-like domain
RB12113	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RB12116	SM00292	breast cancer carboxy-terminal domain
RB12116	SM00479	RB12116
RB1212	SM00116	Domain in cystathionine beta-synthase and other proteins.
RB1212	SM00924	MgtE intracellular N domain
RB12129	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RB1213	SM00841	Elongation factor P, C-terminal
RB1213	SM01185	RB1213
RB12138	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB12148	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB12148	SM00245	tail specific protease
RB12178	SM00858	RB12178
RB12183	SM00267	diguanylate cyclase
RB12205	SM00530	Helix-turn-helix XRE-family like proteins 
RB12238	SM00749	bacterial OsmY and nodulation domain
RB12241	SM00710	Parallel beta-helix repeats
RB12256	SM00014	Acid phosphatase homologues
RB12292	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RB12292	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RB12296	SM00822	RB12296
RB12310	SM00220	Serine/Threonine protein kinases, catalytic domain
RB12315	SM01266	RB12315
RB12326	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RB12326	SM00091	PAS domain
RB12326	SM00387	Histidine kinase-like ATPases
RB12326	SM00388	His Kinase A (phosphoacceptor) domain
RB12326	SM00448	cheY-homologous receiver domain
RB1233	SM00363	S4 RNA-binding domain
RB1233	SM01390	RB1233
RB12343	SM00642	Alpha-amylase domain
RB12360	SM00640	Glycosyl hydrolases family 32
RB12377	SM00650	Ribosomal RNA adenine dimethylases
RB12381	SM01192	RB12381
RB12381	SM01193	RB12381
RB12409	SM00327	von Willebrand factor (vWF) type A domain
RB12421	SM00367	Leucine-rich repeat - CC (cysteine-containing) subfamily
RB12421	SM00368	Leucine rich repeat, ribonuclease inhibitor type
RB12434	SM00028	Tetratricopeptide repeats
RB12436	SM00529	Helix-turn-helix diphteria tox regulatory element
RB12437	SM00529	Helix-turn-helix diphteria tox regulatory element
RB12438	SM00382	ATPases associated with a variety of cellular activities
RB1248	SM00382	ATPases associated with a variety of cellular activities
RB12486	SM00220	Serine/Threonine protein kinases, catalytic domain
RB12500	SM00382	ATPases associated with a variety of cellular activities
RB12549	SM00981	RB12549
RB12562	SM00564	beta-propeller repeat
RB12571	SM00240	Forkhead associated domain
RB12571	SM00267	diguanylate cyclase
RB12572	SM00220	Serine/Threonine protein kinases, catalytic domain
RB12577	SM00841	Elongation factor P, C-terminal
RB12577	SM01185	RB12577
RB12597	SM01329	RB12597
RB1262	SM00481	DNA polymerase alpha chain like domain
RB12626	SM00662	RNA polymerases D
RB12633	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
RB12646	SM00387	Histidine kinase-like ATPases
RB12646	SM00388	His Kinase A (phosphoacceptor) domain
RB12661	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RB12746	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RB12746	SM01232	RB12746
RB12752	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB12756	SM00917	LeuA allosteric (dimerisation) domain
RB12766	SM00052	Putative diguanylate phosphodiesterase
RB12766	SM00240	Forkhead associated domain
RB12768	SM00382	ATPases associated with a variety of cellular activities
RB12773	SM00382	ATPases associated with a variety of cellular activities
RB12774	SM00382	ATPases associated with a variety of cellular activities
RB12799	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RB12799	SM00474	3'-5' exonuclease
RB12799	SM00475	5'-3' exonuclease
RB12799	SM00482	DNA polymerase A domain
RB12825	SM00382	ATPases associated with a variety of cellular activities
RB12825	SM00962	SRP54-type protein, GTPase domain
RB12825	SM00963	SRP54-type protein, helical bundle domain
RB12858	SM00382	ATPases associated with a variety of cellular activities
RB12859	SM00382	ATPases associated with a variety of cellular activities
RB1288	SM00248	ankyrin repeats
RB12881	SM00448	cheY-homologous receiver domain
RB12885	SM00363	S4 RNA-binding domain
RB12921	SM00861	Transketolase, pyrimidine binding domain
RB12924	SM00788	Adenylosuccinate synthetase
RB12949	SM00387	Histidine kinase-like ATPases
RB12952	SM00448	cheY-homologous receiver domain
RB13005	SM00671	Sel1-like repeats.
RB13037	SM00382	ATPases associated with a variety of cellular activities
RB13038	SM00460	Transglutaminase/protease-like homologues
RB13048	SM00564	beta-propeller repeat
RB13091	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RB13094	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RB1310	SM00382	ATPases associated with a variety of cellular activities
RB13112	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB13112	SM00091	PAS domain
RB13112	SM00387	Histidine kinase-like ATPases
RB13112	SM00388	His Kinase A (phosphoacceptor) domain
RB13112	SM00448	cheY-homologous receiver domain
RB13118	SM00448	cheY-homologous receiver domain
RB13118	SM01012	RB13118
RB13139	SM00342	helix_turn_helix, arabinose operon control protein
RB13162	SM00710	Parallel beta-helix repeats
RB13165	SM00342	helix_turn_helix, arabinose operon control protein
RB1317	SM00917	LeuA allosteric (dimerisation) domain
RB13175	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB13175	SM00091	PAS domain
RB13175	SM00387	Histidine kinase-like ATPases
RB13175	SM00388	His Kinase A (phosphoacceptor) domain
RB13175	SM00448	cheY-homologous receiver domain
RB13180	SM00382	ATPases associated with a variety of cellular activities
RB13181	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB13181	SM00091	PAS domain
RB13181	SM00387	Histidine kinase-like ATPases
RB13181	SM00388	His Kinase A (phosphoacceptor) domain
RB13181	SM00448	cheY-homologous receiver domain
RB13193	SM00382	ATPases associated with a variety of cellular activities
RB13225	SM00487	DEAD-like helicases superfamily
RB13225	SM00490	helicase superfamily c-terminal domain
RB13237	SM00327	von Willebrand factor (vWF) type A domain
RB1325	SM00382	ATPases associated with a variety of cellular activities
RB13260	SM00829	Enoylreductase
RB13265	SM00220	Serine/Threonine protein kinases, catalytic domain
RB13291	SM00965	Secretin and TonB N terminus short domain
RB13330	SM00028	Tetratricopeptide repeats
RB1357	SM00267	diguanylate cyclase
RB1359	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB1363	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RB1363	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RB140	SM00220	Serine/Threonine protein kinases, catalytic domain
RB1411	SM01130	RB1411
RB1444	SM00028	Tetratricopeptide repeats
RB1451	SM00564	beta-propeller repeat
RB1454	SM00342	helix_turn_helix, arabinose operon control protein
RB148	SM00957	SecA DEAD-like domain
RB148	SM00958	SecA preprotein cross-linking domain
RB1483	SM00387	Histidine kinase-like ATPases
RB1485	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RB1485	SM00481	DNA polymerase alpha chain like domain
RB1485	SM00483	DNA polymerase X family
RB1488	SM00100	Cyclic nucleotide-monophosphate binding domain
RB1499	SM00382	ATPases associated with a variety of cellular activities
RB1502	SM00448	cheY-homologous receiver domain
RB1517	SM00382	ATPases associated with a variety of cellular activities
RB1529	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB1532	SM00220	Serine/Threonine protein kinases, catalytic domain
RB154	SM00112	Cadherin repeats.
RB154	SM00135	Low-density lipoprotein-receptor YWTD domain
RB1577	SM00487	DEAD-like helicases superfamily
RB1577	SM00490	helicase superfamily c-terminal domain
RB1586	SM00825	Beta-ketoacyl synthase
RB159	SM00387	Histidine kinase-like ATPases
RB159	SM00388	His Kinase A (phosphoacceptor) domain
RB159	SM00448	cheY-homologous receiver domain
RB161	SM00448	cheY-homologous receiver domain
RB161	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB1630	SM00838	Elongation factor G C-terminus
RB1651	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB1656	SM00091	PAS domain
RB1656	SM00267	diguanylate cyclase
RB1656	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB1661	SM00034	C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
RB1661	SM00112	Cadherin repeats.
RB1661	SM00159	Pentraxin / C-reactive protein / pentaxin family
RB1661	SM00282	Laminin G domain
RB1661	SM00560	LamG-like jellyroll fold domain
RB1661	SM00710	Parallel beta-helix repeats
RB1706	SM00382	ATPases associated with a variety of cellular activities
RB1706	SM00760	Bacterial dnaA protein helix-turn-helix domain
RB1708	SM00382	ATPases associated with a variety of cellular activities
RB1711	SM00448	cheY-homologous receiver domain
RB1739	SM00460	Transglutaminase/protease-like homologues
RB1759	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB1764	SM00448	cheY-homologous receiver domain
RB1784	SM00984	UDP binding domain
RB1789	SM00240	Forkhead associated domain
RB1821	SM00220	Serine/Threonine protein kinases, catalytic domain
RB1833	SM00900	RB1833
RB1856	SM01004	Delta-aminolevulinic acid dehydratase
RB1862	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RB1866	SM00382	ATPases associated with a variety of cellular activities
RB1883	SM00382	ATPases associated with a variety of cellular activities
RB1889	SM00220	Serine/Threonine protein kinases, catalytic domain
RB1889	SM00320	WD40 repeats
RB1892	SM00220	Serine/Threonine protein kinases, catalytic domain
RB1892	SM00320	WD40 repeats
RB1893	SM00220	Serine/Threonine protein kinases, catalytic domain
RB1893	SM00320	WD40 repeats
RB1895	SM00382	ATPases associated with a variety of cellular activities
RB1895	SM00487	DEAD-like helicases superfamily
RB1900	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RB1917	SM00320	WD40 repeats
RB1924	SM00237	Domains in Na-Ca exchangers and integrin-beta4
RB1964	SM00028	Tetratricopeptide repeats
RB1972	SM00752	Horizontally Transferred TransMembrane Domain
RB2008	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB2008	SM00387	Histidine kinase-like ATPases
RB2008	SM00388	His Kinase A (phosphoacceptor) domain
RB2013	SM00957	SecA DEAD-like domain
RB2013	SM00958	SecA preprotein cross-linking domain
RB2024	SM00316	Ribosomal protein S1-like RNA-binding domain
RB2055	SM00327	von Willebrand factor (vWF) type A domain
RB2062	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB2066	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB2086	SM00028	Tetratricopeptide repeats
RB2103	SM00823	Phosphopantetheine attachment site
RB2103	SM01294	RB2103
RB2117	SM00028	Tetratricopeptide repeats
RB2143	SM00861	Transketolase, pyrimidine binding domain
RB2162	SM00220	Serine/Threonine protein kinases, catalytic domain
RB2174	SM00448	cheY-homologous receiver domain
RB2226	SM00320	WD40 repeats
RB2242	SM00822	RB2242
RB2253	SM00881	CoA binding domain
RB2296	SM00470	ParB-like nuclease domain
RB2299	SM00091	PAS domain
RB2299	SM00220	Serine/Threonine protein kinases, catalytic domain
RB2396	SM00382	ATPases associated with a variety of cellular activities
RB2396	SM00448	cheY-homologous receiver domain
RB2408	SM01321	RB2408
RB2416	SM00460	Transglutaminase/protease-like homologues
RB2426	SM00271	DnaJ molecular chaperone homology domain
RB2434	SM00363	S4 RNA-binding domain
RB2440	SM00237	Domains in Na-Ca exchangers and integrin-beta4
RB2515	SM00984	UDP binding domain
RB2535	SM00354	helix_turn _helix lactose operon repressor
RB2543	SM00316	Ribosomal protein S1-like RNA-binding domain
RB2549	SM00387	Histidine kinase-like ATPases
RB2549	SM00388	His Kinase A (phosphoacceptor) domain
RB2550	SM00448	cheY-homologous receiver domain
RB2552	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RB2568	SM01007	Class II Aldolase and Adducin N-terminal domain
RB2585	SM00877	RB2585
RB2586	SM00877	RB2586
RB2590	SM00420	helix_turn_helix, Deoxyribose operon repressor
RB2590	SM01134	RB2590
RB2621	SM00448	cheY-homologous receiver domain
RB2621	SM00862	Transcriptional regulatory protein, C terminal
RB2627	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RB2638	SM00642	Alpha-amylase domain
RB2671	SM00240	Forkhead associated domain
RB2673	SM00220	Serine/Threonine protein kinases, catalytic domain
RB2680	SM00756	RB2680
RB2684	SM00342	helix_turn_helix, arabinose operon control protein
RB2717	SM00195	Dual specificity phosphatase, catalytic domain
RB2728	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RB2728	SM00387	Histidine kinase-like ATPases
RB2728	SM00388	His Kinase A (phosphoacceptor) domain
RB2731	SM00382	ATPases associated with a variety of cellular activities
RB2731	SM00448	cheY-homologous receiver domain
RB2743	SM00421	helix_turn_helix, Lux Regulon
RB2743	SM00448	cheY-homologous receiver domain
RB2746	SM01130	RB2746
RB279	SM00382	ATPases associated with a variety of cellular activities
RB2794	SM00476	deoxyribonuclease I
RB2809	SM00028	Tetratricopeptide repeats
RB2809	SM00567	E-Z type HEAT repeats
RB281	SM00883	Chaperonin 10 Kd subunit
RB2817	SM01350	RB2817
RB282	SM00670	Large family of predicted nucleotide-binding domains
RB2839	SM00316	Ribosomal protein S1-like RNA-binding domain
RB284	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB2855	SM00220	Serine/Threonine protein kinases, catalytic domain
RB2872	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB2872	SM00091	PAS domain
RB2872	SM00387	Histidine kinase-like ATPases
RB2872	SM00388	His Kinase A (phosphoacceptor) domain
RB2936	SM00248	ankyrin repeats
RB295	SM00852	Probable molybdopterin binding domain
RB2960	SM00564	beta-propeller repeat
RB2966	SM00382	ATPases associated with a variety of cellular activities
RB2975	SM00938	Nitrogen regulatory protein P-II
RB2982	SM00116	Domain in cystathionine beta-synthase and other proteins.
RB2986	SM00642	Alpha-amylase domain
RB299	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB3003	SM00564	beta-propeller repeat
RB301	SM00478	endonuclease III
RB301	SM00525	RB301
RB3023	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB307	SM00919	Malic enzyme, NAD binding domain
RB307	SM01274	RB307
RB3077	SM00710	Parallel beta-helix repeats
RB3103	SM00481	DNA polymerase alpha chain like domain
RB314	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RB316	SM00822	RB316
RB3174	SM00363	S4 RNA-binding domain
RB3195	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB3195	SM00245	tail specific protease
RB320	SM00825	Beta-ketoacyl synthase
RB321	SM00421	helix_turn_helix, Lux Regulon
RB321	SM00448	cheY-homologous receiver domain
RB3245	SM00331	Sigma factor PP2C-like phosphatases
RB3245	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RB3251	SM00052	Putative diguanylate phosphodiesterase
RB3251	SM00267	diguanylate cyclase
RB3251	SM00448	cheY-homologous receiver domain
RB3253	SM00382	ATPases associated with a variety of cellular activities
RB3266	SM00363	S4 RNA-binding domain
RB3271	SM00220	Serine/Threonine protein kinases, catalytic domain
RB3281	SM00411	bacterial (prokaryotic) histone like domain
RB3287	SM00382	ATPases associated with a variety of cellular activities
RB3313	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RB3313	SM00316	Ribosomal protein S1-like RNA-binding domain
RB3313	SM00732	Likely ribonuclease with RNase H fold.
RB334	SM00746	metallochaperone-like domain
RB3345	SM00342	helix_turn_helix, arabinose operon control protein
RB3352	SM01130	RB3352
RB3363	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB3363	SM00091	PAS domain
RB3363	SM00421	helix_turn_helix, Lux Regulon
RB3373	SM00028	Tetratricopeptide repeats
RB3373	SM00220	Serine/Threonine protein kinases, catalytic domain
RB3373	SM00387	Histidine kinase-like ATPases
RB3373	SM00388	His Kinase A (phosphoacceptor) domain
RB3373	SM00448	cheY-homologous receiver domain
RB3379	SM00028	Tetratricopeptide repeats
RB3388	SM00191	Integrin alpha (beta-propellor repeats).
RB3431	SM00464	Found in ATP-dependent protease La (LON)
RB3465	SM00434	DNA Topoisomerase IV
RB3466	SM00387	Histidine kinase-like ATPases
RB3466	SM00433	TopoisomeraseII
RB3482	SM00382	ATPases associated with a variety of cellular activities
RB3487	SM00342	helix_turn_helix, arabinose operon control protein
RB3496	SM00382	ATPases associated with a variety of cellular activities
RB3521	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RB3527	SM00912	haemagglutination activity domain
RB3549	SM00342	helix_turn_helix, arabinose operon control protein
RB3599	SM00612	RB3599
RB3605	SM00052	Putative diguanylate phosphodiesterase
RB3605	SM00267	diguanylate cyclase
RB3606	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB3606	SM00091	PAS domain
RB3606	SM00387	Histidine kinase-like ATPases
RB3614	SM00382	ATPases associated with a variety of cellular activities
RB3614	SM00448	cheY-homologous receiver domain
RB3615	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB3615	SM00091	PAS domain
RB3615	SM00387	Histidine kinase-like ATPases
RB3615	SM00388	His Kinase A (phosphoacceptor) domain
RB3627	SM00460	Transglutaminase/protease-like homologues
RB3653	SM00342	helix_turn_helix, arabinose operon control protein
RB3675	SM00333	Tudor domain
RB3675	SM00743	Tudor-like domain present in plant sequences.
RB3686	SM00829	Enoylreductase
RB3692	SM00342	helix_turn_helix, arabinose operon control protein
RB3714	SM00825	Beta-ketoacyl synthase
RB3729	SM00100	Cyclic nucleotide-monophosphate binding domain
RB3729	SM00382	ATPases associated with a variety of cellular activities
RB373	SM00382	ATPases associated with a variety of cellular activities
RB374	SM00382	ATPases associated with a variety of cellular activities
RB3767	SM01329	RB3767
RB3779	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB3779	SM00091	PAS domain
RB3779	SM00387	Histidine kinase-like ATPases
RB3779	SM01079	RB3779
RB378	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RB3784	SM00448	cheY-homologous receiver domain
RB3788	SM00382	ATPases associated with a variety of cellular activities
RB3792	SM00387	Histidine kinase-like ATPases
RB3792	SM00388	His Kinase A (phosphoacceptor) domain
RB3893	SM00220	Serine/Threonine protein kinases, catalytic domain
RB3895	SM00365	Leucine-rich repeat, SDS22-like subfamily
RB3895	SM00369	Leucine-rich repeats, typical (most populated) subfamily
RB3915	SM00986	Uracil DNA glycosylase superfamily
RB3915	SM00987	UreE urease accessory protein, C-terminal domain 
RB3946	SM01144	RB3946
RB4013	SM00487	DEAD-like helicases superfamily
RB4013	SM00490	helicase superfamily c-terminal domain
RB4013	SM00847	Helicase associated domain (HA2)  Add an annotation
RB4031	SM00220	Serine/Threonine protein kinases, catalytic domain
RB4053	SM00327	von Willebrand factor (vWF) type A domain
RB4069	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB4081	SM00382	ATPases associated with a variety of cellular activities
RB4097	SM00530	Helix-turn-helix XRE-family like proteins 
RB4131	SM00829	Enoylreductase
RB4136	SM00448	cheY-homologous receiver domain
RB4137	SM00387	Histidine kinase-like ATPases
RB4137	SM00388	His Kinase A (phosphoacceptor) domain
RB4173	SM00382	ATPases associated with a variety of cellular activities
RB4173	SM00962	SRP54-type protein, GTPase domain
RB4173	SM00963	SRP54-type protein, helical bundle domain
RB4179	SM00240	Forkhead associated domain
RB4179	SM00382	ATPases associated with a variety of cellular activities
RB4186	SM00220	Serine/Threonine protein kinases, catalytic domain
RB419	SM00220	Serine/Threonine protein kinases, catalytic domain
RB4201	SM00901	RB4201
RB423	SM00903	Flavin reductase like domain
RB4247	SM00487	DEAD-like helicases superfamily
RB4247	SM00490	helicase superfamily c-terminal domain
RB4247	SM00847	Helicase associated domain (HA2)  Add an annotation
RB4267	SM01057	Eukaryotic-type carbonic anhydrase
RB4270	SM00477	DNA/RNA non-specific endonuclease
RB4270	SM00892	DNA/RNA non-specific endonuclease
RB4282	SM00235	Zinc-dependent metalloprotease
RB4309	SM00382	ATPases associated with a variety of cellular activities
RB4366	SM00506	Appr-1"-p processing enzyme
RB4375	SM00237	Domains in Na-Ca exchangers and integrin-beta4
RB4375	SM00710	Parallel beta-helix repeats
RB4376	SM01060	RB4376
RB4399	SM00829	Enoylreductase
RB4422	SM00448	cheY-homologous receiver domain
RB4444	SM00710	Parallel beta-helix repeats
RB4487	SM00382	ATPases associated with a variety of cellular activities
RB4487	SM00448	cheY-homologous receiver domain
RB4508	SM00448	cheY-homologous receiver domain
RB4511	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB4511	SM00091	PAS domain
RB4511	SM00138	Methyltransferase, chemotaxis proteins 
RB4511	SM00387	Histidine kinase-like ATPases
RB4511	SM00388	His Kinase A (phosphoacceptor) domain
RB4511	SM00448	cheY-homologous receiver domain
RB4527	SM00825	Beta-ketoacyl synthase
RB4547	SM00248	ankyrin repeats
RB4578	SM01091	Transporter associated domain
RB4580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB460	SM00487	DEAD-like helicases superfamily
RB460	SM00490	helicase superfamily c-terminal domain
RB4605	SM01130	RB4605
RB4621	SM00776	RB4621
RB4632	SM01323	RB4632
RB4658	SM00116	Domain in cystathionine beta-synthase and other proteins.
RB4675	SM00840	RB4675
RB4681	SM00357	Cold shock protein domain
RB4685	SM00028	Tetratricopeptide repeats
RB4714	SM00382	ATPases associated with a variety of cellular activities
RB4728	SM00220	Serine/Threonine protein kinases, catalytic domain
RB4737	SM01133	RB4737
RB4758	SM00091	PAS domain
RB4758	SM00387	Histidine kinase-like ATPases
RB4758	SM00388	His Kinase A (phosphoacceptor) domain
RB4758	SM00448	cheY-homologous receiver domain
RB4759	SM00091	PAS domain
RB4759	SM00387	Histidine kinase-like ATPases
RB4759	SM00388	His Kinase A (phosphoacceptor) domain
RB4760	SM00448	cheY-homologous receiver domain
RB4788	SM00248	ankyrin repeats
RB4862	SM00710	Parallel beta-helix repeats
RB4866	SM00382	ATPases associated with a variety of cellular activities
RB4868	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB4881	SM01321	RB4881
RB4894	SM00642	Alpha-amylase domain
RB4904	SM00855	Phosphoglycerate mutase family
RB4906	SM00382	ATPases associated with a variety of cellular activities
RB492	SM00054	EF-hand, calcium binding motif
RB4925	SM00358	Double-stranded RNA binding motif
RB4925	SM00535	Ribonuclease III family
RB4928	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB4931	SM00935	Outer membrane protein (OmpH-like)
RB4958	SM00240	Forkhead associated domain
RB4960	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB4967	SM00420	helix_turn_helix, Deoxyribose operon repressor
RB4994	SM00387	Histidine kinase-like ATPases
RB4994	SM00388	His Kinase A (phosphoacceptor) domain
RB4997	SM00357	Cold shock protein domain
RB4997	SM00382	ATPases associated with a variety of cellular activities
RB4997	SM00959	Rho termination factor, N-terminal domain
RB4998	SM00478	endonuclease III
RB5005	SM00938	Nitrogen regulatory protein P-II
RB5028	SM00220	Serine/Threonine protein kinases, catalytic domain
RB5042	SM00849	Metallo-beta-lactamase superfamily
RB5055	SM00382	ATPases associated with a variety of cellular activities
RB5056	SM00382	ATPases associated with a variety of cellular activities
RB5097	SM00478	endonuclease III
RB5126	SM00567	E-Z type HEAT repeats
RB5152	SM00382	ATPases associated with a variety of cellular activities
RB5172	SM00858	RB5172
RB5178	SM00946	Prolyl-tRNA synthetase, C-terminal
RB5179	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RB5196	SM00642	Alpha-amylase domain
RB5200	SM00642	Alpha-amylase domain
RB522	SM00342	helix_turn_helix, arabinose operon control protein
RB5247	SM00320	WD40 repeats
RB5259	SM00487	DEAD-like helicases superfamily
RB5259	SM00490	helicase superfamily c-terminal domain
RB5272	SM00564	beta-propeller repeat
RB5275	SM00342	helix_turn_helix, arabinose operon control protein
RB5277	SM01130	RB5277
RB5308	SM00342	helix_turn_helix, arabinose operon control protein
RB5316	SM00656	RB5316
RB5319	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RB5320	SM00829	Enoylreductase
RB5334	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB5346	SM01321	RB5346
RB5367	SM00857	Resolvase, N terminal domain
RB5380	SM00564	beta-propeller repeat
RB539	SM00852	Probable molybdopterin binding domain
RB5416	SM00663	RNA polymerase I subunit A N-terminus
RB5421	SM00560	LamG-like jellyroll fold domain
RB5434	SM00838	Elongation factor G C-terminus
RB5434	SM00889	Elongation factor G, domain IV
RB5465	SM00267	diguanylate cyclase
RB5465	SM00448	cheY-homologous receiver domain
RB5471	SM00448	cheY-homologous receiver domain
RB5472	SM00448	cheY-homologous receiver domain
RB5477	SM00448	cheY-homologous receiver domain
RB5478	SM00448	cheY-homologous receiver domain
RB5479	SM00387	Histidine kinase-like ATPases
RB5479	SM00388	His Kinase A (phosphoacceptor) domain
RB5479	SM00448	cheY-homologous receiver domain
RB548	SM00642	Alpha-amylase domain
RB5482	SM00448	cheY-homologous receiver domain
RB5486	SM00320	WD40 repeats
RB5499	SM00710	Parallel beta-helix repeats
RB5507	SM00316	Ribosomal protein S1-like RNA-binding domain
RB5507	SM00322	K homology RNA-binding domain
RB5524	SM00710	Parallel beta-helix repeats
RB5557	SM00564	beta-propeller repeat
RB5566	SM00382	ATPases associated with a variety of cellular activities
RB5571	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB5593	SM00028	Tetratricopeptide repeats
RB5593	SM00220	Serine/Threonine protein kinases, catalytic domain
RB5606	SM00382	ATPases associated with a variety of cellular activities
RB5620	SM00986	Uracil DNA glycosylase superfamily
RB5620	SM00987	UreE urease accessory protein, C-terminal domain 
RB5645	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB5645	SM00758	RB5645
RB5647	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB5657	SM00886	Stress responsive A/B Barrel Domain
RB5670	SM00450	Rhodanese Homology Domain
RB5689	SM00341	Helicase and RNase D C-terminal
RB5689	SM00474	3'-5' exonuclease
RB5731	SM00220	Serine/Threonine protein kinases, catalytic domain
RB5734	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RB5736	SM00421	helix_turn_helix, Lux Regulon
RB5744	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RB5747	SM00836	DALR anticodon binding domain
RB5747	SM01016	Arginyl tRNA synthetase N terminal dom
RB577	SM00710	Parallel beta-helix repeats
RB5778	SM00098	Alkaline phosphatase homologues
RB5780	SM00448	cheY-homologous receiver domain
RB5786	SM00028	Tetratricopeptide repeats
RB5801	SM01387	RB5801
RB5804	SM00316	Ribosomal protein S1-like RNA-binding domain
RB5804	SM00322	K homology RNA-binding domain
RB5816	SM00812	Alpha-L-fucosidase
RB5830	SM00155	Phospholipase D. Active site motifs.
RB5841	SM00560	LamG-like jellyroll fold domain
RB5858	SM00530	Helix-turn-helix XRE-family like proteins 
RB5871	SM00382	ATPases associated with a variety of cellular activities
RB5876	SM00560	LamG-like jellyroll fold domain
RB5881	SM00530	Helix-turn-helix XRE-family like proteins 
RB5884	SM00470	ParB-like nuclease domain
RB5901	SM00327	von Willebrand factor (vWF) type A domain
RB5920	SM00320	WD40 repeats
RB5943	SM00448	cheY-homologous receiver domain
RB5948	SM00829	Enoylreductase
RB5964	SM00267	diguanylate cyclase
RB5964	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB5969	SM00341	Helicase and RNase D C-terminal
RB5969	SM00487	DEAD-like helicases superfamily
RB5969	SM00490	helicase superfamily c-terminal domain
RB5969	SM00956	RB5969
RB5972	SM00382	ATPases associated with a variety of cellular activities
RB601	SM00248	ankyrin repeats
RB6033	SM00028	Tetratricopeptide repeats
RB6033	SM00220	Serine/Threonine protein kinases, catalytic domain
RB6042	SM01091	Transporter associated domain
RB6065	SM00968	SMC proteins Flexible Hinge Domain
RB6070	SM00507	HNH nucleases
RB6107	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
RB6120	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB6127	SM00327	von Willebrand factor (vWF) type A domain
RB6135	SM01001	AIR carboxylase
RB614	SM00564	beta-propeller repeat
RB617	SM00320	WD40 repeats
RB6201	SM00487	DEAD-like helicases superfamily
RB6201	SM00490	helicase superfamily c-terminal domain
RB6201	SM00982	RB6201
RB6201	SM01058	CarD-like/TRCF domain
RB6207	SM00564	beta-propeller repeat
RB6211	SM00028	Tetratricopeptide repeats
RB6217	SM00448	cheY-homologous receiver domain
RB6236	SM00382	ATPases associated with a variety of cellular activities
RB6238	SM00116	Domain in cystathionine beta-synthase and other proteins.
RB6255	SM00028	Tetratricopeptide repeats
RB6276	SM00411	bacterial (prokaryotic) histone like domain
RB6285	SM00996	S-adenosyl-L-homocysteine hydrolase
RB6285	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
RB631	SM00220	Serine/Threonine protein kinases, catalytic domain
RB6315	SM00421	helix_turn_helix, Lux Regulon
RB6327	SM00822	RB6327
RB6328	SM01118	RB6328
RB6344	SM00400	zinc finger
RB6344	SM00493	RB6344
RB638	SM00564	beta-propeller repeat
RB6395	SM00028	Tetratricopeptide repeats
RB6403	SM00091	PAS domain
RB6403	SM00421	helix_turn_helix, Lux Regulon
RB641	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB641	SM00091	PAS domain
RB641	SM00387	Histidine kinase-like ATPases
RB641	SM00388	His Kinase A (phosphoacceptor) domain
RB641	SM00448	cheY-homologous receiver domain
RB6417	SM00240	Forkhead associated domain
RB6428	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
RB6446	SM00327	von Willebrand factor (vWF) type A domain
RB6466	SM00838	Elongation factor G C-terminus
RB6467	SM00855	Phosphoglycerate mutase family
RB6469	SM00382	ATPases associated with a variety of cellular activities
RB6483	SM00487	DEAD-like helicases superfamily
RB6483	SM00490	helicase superfamily c-terminal domain
RB6485	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB6486	SM00564	beta-propeller repeat
RB6489	SM01119	RB6489
RB6490	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB6492	SM00493	RB6492
RB6494	SM00382	ATPases associated with a variety of cellular activities
RB6500	SM00822	RB6500
RB6500	SM00823	Phosphopantetheine attachment site
RB6500	SM00824	Thioesterase
RB6500	SM00825	Beta-ketoacyl synthase
RB6500	SM00826	RB6500
RB6500	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RB6500	SM00829	Enoylreductase
RB6533	SM00563	Phosphate acyltransferases
RB6542	SM00342	helix_turn_helix, arabinose operon control protein
RB6552	SM00937	RB6552
RB6603	SM00382	ATPases associated with a variety of cellular activities
RB6616	SM01209	RB6616
RB6616	SM01210	RB6616
RB6669	SM00382	ATPases associated with a variety of cellular activities
RB6671	SM00028	Tetratricopeptide repeats
RB6686	SM00448	cheY-homologous receiver domain
RB6686	SM00862	Transcriptional regulatory protein, C terminal
RB6729	SM01133	RB6729
RB6751	SM00382	ATPases associated with a variety of cellular activities
RB6751	SM01086	C-terminal, D2-small domain, of ClpB protein
RB6763	SM00587	ZnF_C4 abd HLH domain containing kinases domain
RB680	SM00342	helix_turn_helix, arabinose operon control protein
RB6802	SM00822	RB6802
RB681	SM01007	Class II Aldolase and Adducin N-terminal domain
RB6818	SM00387	Histidine kinase-like ATPases
RB6818	SM00388	His Kinase A (phosphoacceptor) domain
RB6827	SM00220	Serine/Threonine protein kinases, catalytic domain
RB6844	SM01400	RB6844
RB6883	SM00382	ATPases associated with a variety of cellular activities
RB693	SM01321	RB693
RB6930	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
RB6945	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RB6945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RB6959	SM00382	ATPases associated with a variety of cellular activities
RB6982	SM00382	ATPases associated with a variety of cellular activities
RB7004	SM00822	RB7004
RB7010	SM00465	GIY-YIG type nucleases (URI domain)
RB7058	SM00220	Serine/Threonine protein kinases, catalytic domain
RB7081	SM00822	RB7081
RB7084	SM00116	Domain in cystathionine beta-synthase and other proteins.
RB7084	SM01131	RB7084
RB7090	SM00072	Guanylate kinase homologues.
RB7099	SM00327	von Willebrand factor (vWF) type A domain
RB7104	SM00244	prohibitin homologues
RB7112	SM00873	B3/4 domain
RB7112	SM00874	tRNA synthetase B5 domain
RB7112	SM00896	Ferredoxin-fold anticodon binding domain
RB7123	SM00448	cheY-homologous receiver domain
RB7129	SM00899	RB7129
RB7134	SM00382	ATPases associated with a variety of cellular activities
RB7147	SM00563	Phosphate acyltransferases
RB7166	SM00382	ATPases associated with a variety of cellular activities
RB7171	SM00825	Beta-ketoacyl synthase
RB7184	SM00448	cheY-homologous receiver domain
RB7190	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RB7190	SM00240	Forkhead associated domain
RB7190	SM00331	Sigma factor PP2C-like phosphatases
RB7201	SM00465	GIY-YIG type nucleases (URI domain)
RB7211	SM00382	ATPases associated with a variety of cellular activities
RB7229	SM00560	LamG-like jellyroll fold domain
RB7232	SM00382	ATPases associated with a variety of cellular activities
RB7237	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
RB7237	SM00534	ATPase domain of DNA mismatch repair MUTS family
RB7247	SM01230	RB7247
RB7276	SM00823	Phosphopantetheine attachment site
RB7289	SM00382	ATPases associated with a variety of cellular activities
RB7301	SM00487	DEAD-like helicases superfamily
RB7301	SM00490	helicase superfamily c-terminal domain
RB7308	SM00387	Histidine kinase-like ATPases
RB7317	SM00487	DEAD-like helicases superfamily
RB7317	SM00490	helicase superfamily c-terminal domain
RB7321	SM00710	Parallel beta-helix repeats
RB7341	SM00710	Parallel beta-helix repeats
RB7367	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB7368	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB7371	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB7408	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB7408	SM00245	tail specific protease
RB7410	SM00091	PAS domain
RB7410	SM00387	Histidine kinase-like ATPases
RB7410	SM00388	His Kinase A (phosphoacceptor) domain
RB7452	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
RB7461	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RB7461	SM00091	PAS domain
RB7461	SM00448	cheY-homologous receiver domain
RB7474	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RB7474	SM00091	PAS domain
RB7474	SM00387	Histidine kinase-like ATPases
RB7474	SM00388	His Kinase A (phosphoacceptor) domain
RB7474	SM00448	cheY-homologous receiver domain
RB7488	SM00387	Histidine kinase-like ATPases
RB7488	SM00388	His Kinase A (phosphoacceptor) domain
RB749	SM00564	beta-propeller repeat
RB7495	SM00028	Tetratricopeptide repeats
RB7500	SM00382	ATPases associated with a variety of cellular activities
RB7501	SM00327	von Willebrand factor (vWF) type A domain
RB7502	SM00327	von Willebrand factor (vWF) type A domain
RB7503	SM00327	von Willebrand factor (vWF) type A domain
RB7521	SM00460	Transglutaminase/protease-like homologues
RB7541	SM00564	beta-propeller repeat
RB7557	SM00327	von Willebrand factor (vWF) type A domain
RB7569	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RB7569	SM01232	RB7569
RB7579	SM00382	ATPases associated with a variety of cellular activities
RB7579	SM00448	cheY-homologous receiver domain
RB7597	SM00347	helix_turn_helix multiple antibiotic resistance protein
RB7598	SM00849	Metallo-beta-lactamase superfamily
RB7627	SM00322	K homology RNA-binding domain
RB7627	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB7633	SM00382	ATPases associated with a variety of cellular activities
RB7705	SM00852	Probable molybdopterin binding domain
RB7745	SM00869	Autotransporter beta-domain
RB7754	SM00530	Helix-turn-helix XRE-family like proteins 
RB7777	SM00900	RB7777
RB7781	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RB7781	SM01080	RB7781
RB7798	SM00220	Serine/Threonine protein kinases, catalytic domain
RB7821	SM00838	Elongation factor G C-terminus
RB7821	SM00889	Elongation factor G, domain IV
RB7829	SM01403	RB7829
RB7837	SM01382	RB7837
RB7837	SM01383	RB7837
RB7840	SM00322	K homology RNA-binding domain
RB7850	SM01374	RB7850
RB7851	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RB7883	SM00853	MutL C terminal dimerisation domain
RB7883	SM01340	RB7883
RB7898	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RB7898	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RB7899	SM00649	Ribosomal protein L11/L12
RB7903	SM00382	ATPases associated with a variety of cellular activities
RB7919	SM00220	Serine/Threonine protein kinases, catalytic domain
RB7928	SM00220	Serine/Threonine protein kinases, catalytic domain
RB7947	SM00028	Tetratricopeptide repeats
RB7957	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RB7957	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RB7957	SM00493	RB7957
RB7959	SM00382	ATPases associated with a variety of cellular activities
RB7999	SM01130	RB7999
RB8	SM00487	DEAD-like helicases superfamily
RB8	SM00490	helicase superfamily c-terminal domain
RB8028	SM00220	Serine/Threonine protein kinases, catalytic domain
RB8029	SM00822	RB8029
RB8062	SM00487	DEAD-like helicases superfamily
RB8062	SM00488	RB8062
RB8062	SM00491	RB8062
RB8076	SM00732	Likely ribonuclease with RNase H fold.
RB8113	SM00382	ATPases associated with a variety of cellular activities
RB8116	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RB8134	SM00382	ATPases associated with a variety of cellular activities
RB8167	SM00028	Tetratricopeptide repeats
RB8174	SM00327	von Willebrand factor (vWF) type A domain
RB8189	SM00487	DEAD-like helicases superfamily
RB8189	SM00490	helicase superfamily c-terminal domain
RB8236	SM00886	Stress responsive A/B Barrel Domain
RB8240	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB8260	SM01152	RB8260
RB8274	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RB8274	SM00240	Forkhead associated domain
RB8274	SM00387	Histidine kinase-like ATPases
RB8274	SM00388	His Kinase A (phosphoacceptor) domain
RB8286	SM00904	Riboflavin kinase
RB8291	SM01001	AIR carboxylase
RB8311	SM00220	Serine/Threonine protein kinases, catalytic domain
RB8320	SM00382	ATPases associated with a variety of cellular activities
RB8320	SM00962	SRP54-type protein, GTPase domain
RB8326	SM00220	Serine/Threonine protein kinases, catalytic domain
RB8328	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RB8343	SM00998	Adenylosuccinate lyase C-terminus
RB8362	SM00331	Sigma factor PP2C-like phosphatases
RB8362	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RB8368	SM00450	Rhodanese Homology Domain
RB8375	SM00382	ATPases associated with a variety of cellular activities
RB8396	SM00487	DEAD-like helicases superfamily
RB8396	SM00490	helicase superfamily c-terminal domain
RB8397	SM00487	DEAD-like helicases superfamily
RB8397	SM00490	helicase superfamily c-terminal domain
RB8402	SM00955	RB8402
RB8406	SM00871	Bacterial transcription activator, effector binding domain
RB8411	SM00530	Helix-turn-helix XRE-family like proteins 
RB8418	SM00487	DEAD-like helicases superfamily
RB8418	SM00490	helicase superfamily c-terminal domain
RB8505	SM00564	beta-propeller repeat
RB8543	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RB8550	SM00878	Biotin carboxylase C-terminal domain
RB8555	SM00220	Serine/Threonine protein kinases, catalytic domain
RB8595	SM00316	Ribosomal protein S1-like RNA-binding domain
RB8613	SM01211	RB8613
RB8637	SM00855	Phosphoglycerate mutase family
RB8639	SM00564	beta-propeller repeat
RB8680	SM00849	Metallo-beta-lactamase superfamily
RB8680	SM01027	Beta-Casp domain
RB8686	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RB8693	SM00382	ATPases associated with a variety of cellular activities
RB8695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RB8722	SM01321	RB8722
RB8745	SM00240	Forkhead associated domain
RB8745	SM00382	ATPases associated with a variety of cellular activities
RB8754	SM00028	Tetratricopeptide repeats
RB8759	SM00327	von Willebrand factor (vWF) type A domain
RB8763	SM00327	von Willebrand factor (vWF) type A domain
RB8767	SM00327	von Willebrand factor (vWF) type A domain
RB8768	SM00382	ATPases associated with a variety of cellular activities
RB8773	SM00244	prohibitin homologues
RB8777	SM00382	ATPases associated with a variety of cellular activities
RB8796	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RB8796	SM00895	RB8796
RB8798	SM01130	RB8798
RB8820	SM00448	cheY-homologous receiver domain
RB8841	SM00434	DNA Topoisomerase IV
RB8843	SM00382	ATPases associated with a variety of cellular activities
RB886	SM00112	Cadherin repeats.
RB886	SM00736	Dystroglycan-type cadherin-like domains.
RB8871	SM00822	RB8871
RB8873	SM00387	Histidine kinase-like ATPases
RB8873	SM00388	His Kinase A (phosphoacceptor) domain
RB8873	SM00448	cheY-homologous receiver domain
RB8928	SM00563	Phosphate acyltransferases
RB8929	SM00220	Serine/Threonine protein kinases, catalytic domain
RB8937	SM00450	Rhodanese Homology Domain
RB8939	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RB8969	SM00883	Chaperonin 10 Kd subunit
RB8972	SM00271	DnaJ molecular chaperone homology domain
RB8976	SM00834	Putative regulatory protein
RB8978	SM00849	Metallo-beta-lactamase superfamily
RB9019	SM00220	Serine/Threonine protein kinases, catalytic domain
RB9066	SM00028	Tetratricopeptide repeats
RB9073	SM00028	Tetratricopeptide repeats
RB9076	SM00382	ATPases associated with a variety of cellular activities
RB9078	SM00861	Transketolase, pyrimidine binding domain
RB9101	SM00867	YceI-like domain 
RB9103	SM00382	ATPases associated with a variety of cellular activities
RB9103	SM01086	C-terminal, D2-small domain, of ClpB protein
RB9108	SM00382	ATPases associated with a variety of cellular activities
RB9109	SM00387	Histidine kinase-like ATPases
RB9109	SM00433	TopoisomeraseII
RB9110	SM00564	beta-propeller repeat
RB9119	SM00116	Domain in cystathionine beta-synthase and other proteins.
RB9119	SM00924	MgtE intracellular N domain
RB9136	SM00633	Glycosyl hydrolase family 10
RB9156	SM00028	Tetratricopeptide repeats
RB9201	SM01360	RB9201
RB9212	SM00476	deoxyribonuclease I
RB9216	SM00248	ankyrin repeats
RB9222	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB9255	SM01228	RB9255
RB9292	SM00642	Alpha-amylase domain
RB9305	SM00937	RB9305
RB9317	SM00220	Serine/Threonine protein kinases, catalytic domain
RB9317	SM00320	WD40 repeats
RB9329	SM00320	WD40 repeats
RB9340	SM00567	E-Z type HEAT repeats
RB9344	SM00487	DEAD-like helicases superfamily
RB9344	SM00490	helicase superfamily c-terminal domain
RB9364	SM00382	ATPases associated with a variety of cellular activities
RB9374	SM00487	DEAD-like helicases superfamily
RB9374	SM00490	helicase superfamily c-terminal domain
RB9376	SM00112	Cadherin repeats.
RB9382	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RB9385	SM00382	ATPases associated with a variety of cellular activities
RB9401	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB9418	SM00091	PAS domain
RB9418	SM00387	Histidine kinase-like ATPases
RB9418	SM00388	His Kinase A (phosphoacceptor) domain
RB9418	SM01079	RB9418
RB9420	SM00382	ATPases associated with a variety of cellular activities
RB9421	SM00327	von Willebrand factor (vWF) type A domain
RB9427	SM00327	von Willebrand factor (vWF) type A domain
RB9428	SM00387	Histidine kinase-like ATPases
RB9428	SM00388	His Kinase A (phosphoacceptor) domain
RB9431	SM00448	cheY-homologous receiver domain
RB9431	SM00862	Transcriptional regulatory protein, C terminal
RB9435	SM00220	Serine/Threonine protein kinases, catalytic domain
RB9439	SM00758	RB9439
RB9477	SM00382	ATPases associated with a variety of cellular activities
RB9486	SM00347	helix_turn_helix multiple antibiotic resistance protein
RB9502	SM00327	von Willebrand factor (vWF) type A domain
RB9505	SM00028	Tetratricopeptide repeats
RB9533	SM00155	Phospholipase D. Active site motifs.
RB9551	SM00382	ATPases associated with a variety of cellular activities
RB9570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RB9570	SM00382	ATPases associated with a variety of cellular activities
RB9574	SM00822	RB9574
RB9584	SM00829	Enoylreductase
RB9604	SM00320	WD40 repeats
RB9611	SM00382	ATPases associated with a variety of cellular activities
RB9612	SM00382	ATPases associated with a variety of cellular activities
RB9661	SM00342	helix_turn_helix, arabinose operon control protein
RB9664	SM00327	von Willebrand factor (vWF) type A domain
RB9664	SM00609	Vault protein Inter-alpha-Trypsin domain
RB9670	SM01321	RB9670
RB9674	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
RB9710	SM00327	von Willebrand factor (vWF) type A domain
RB9745	SM00220	Serine/Threonine protein kinases, catalytic domain
RB9766	SM00382	ATPases associated with a variety of cellular activities
RB9769	SM00226	Low molecular weight phosphatase family
RB9771	SM00479	RB9771
RB9794	SM00938	Nitrogen regulatory protein P-II
RB9795	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RB9808	SM00382	ATPases associated with a variety of cellular activities
RB9823	SM00116	Domain in cystathionine beta-synthase and other proteins.
RB9840	SM00849	Metallo-beta-lactamase superfamily
RB9854	SM00220	Serine/Threonine protein kinases, catalytic domain
RB9857	SM01018	B12 binding domain
RB9876	SM00729	Elongator protein 3, MiaB family, Radical SAM
RB9879	SM00091	PAS domain
RB9879	SM00342	helix_turn_helix, arabinose operon control protein
RB9911	SM00633	Glycosyl hydrolase family 10
RB9927	SM00382	ATPases associated with a variety of cellular activities
RB9927	SM00994	ClpX C4-type zinc finger
RB9927	SM01086	C-terminal, D2-small domain, of ClpB protein
RB9957	SM00758	RB9957
RB997	SM00028	Tetratricopeptide repeats
RB997	SM00422	helix_turn_helix, mercury resistance
RB9979	SM00534	ATPase domain of DNA mismatch repair MUTS family
RB9998	SM00382	ATPases associated with a variety of cellular activities
