RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 2.2E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 2.2E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 198 2.2E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 SUPERFAMILY SSF51735 30 291 1.79E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 Pfam PF00106 short chain dehydrogenase 32 215 5.5E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 169 2.1E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 2.1E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 2.1E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 2.1E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 107 118 2.1E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 Gene3D G3DSA:3.40.50.720 32 264 7.9E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2239 9c36ddc7dc95dd067735890dc8bfc84e 296 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 166 194 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB3228 1d49df7c4cf81a9b797b945910cc840e 962 Pfam PF07624 Protein of unknown function (DUF1585) 881 954 5.1E-21 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB3228 1d49df7c4cf81a9b797b945910cc840e 962 Pfam PF07626 Protein of unknown function (DUF1587) 200 263 3.5E-26 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB3228 1d49df7c4cf81a9b797b945910cc840e 962 Pfam PF07637 Protein of unknown function (DUF1595) 540 600 3.9E-19 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB3228 1d49df7c4cf81a9b797b945910cc840e 962 Pfam PF07627 Protein of unknown function (DUF1588) 768 864 7.0E-30 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB3228 1d49df7c4cf81a9b797b945910cc840e 962 Pfam PF07631 Protein of unknown function (DUF1592) 619 747 6.0E-36 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB3228 1d49df7c4cf81a9b797b945910cc840e 962 Pfam PF07635 Planctomycete cytochrome C 116 163 1.5E-5 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB2403 7d905923d8c4bd4ac9967b4e23531707 502 PRINTS PR00084 Mannitol dehydrogenase signature 227 240 6.8E-19 T 11-11-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RB2403 7d905923d8c4bd4ac9967b4e23531707 502 PRINTS PR00084 Mannitol dehydrogenase signature 188 201 6.8E-19 T 11-11-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RB2403 7d905923d8c4bd4ac9967b4e23531707 502 PRINTS PR00084 Mannitol dehydrogenase signature 34 44 6.8E-19 T 11-11-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RB2403 7d905923d8c4bd4ac9967b4e23531707 502 PRINTS PR00084 Mannitol dehydrogenase signature 257 272 6.8E-19 T 11-11-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RB2403 7d905923d8c4bd4ac9967b4e23531707 502 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 33 197 1.7E-42 T 11-11-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 RB2403 7d905923d8c4bd4ac9967b4e23531707 502 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 226 470 1.7E-79 T 11-11-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 RB2403 7d905923d8c4bd4ac9967b4e23531707 502 Gene3D G3DSA:1.10.1040.10 292 495 5.5E-60 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RB2403 7d905923d8c4bd4ac9967b4e23531707 502 Gene3D G3DSA:3.40.50.720 9 290 2.2E-113 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2403 7d905923d8c4bd4ac9967b4e23531707 502 SUPERFAMILY SSF51735 9 290 2.13E-103 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2403 7d905923d8c4bd4ac9967b4e23531707 502 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 227 239 - T 11-11-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RB2403 7d905923d8c4bd4ac9967b4e23531707 502 SUPERFAMILY SSF48179 292 490 1.02E-54 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB171 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB171 7fcf33e14d5175490c9eb8baa8fb6c99 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB171 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB171 7fcf33e14d5175490c9eb8baa8fb6c99 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB11803 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB11803 7fcf33e14d5175490c9eb8baa8fb6c99 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB11803 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB11803 7fcf33e14d5175490c9eb8baa8fb6c99 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB1190 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB1190 7fcf33e14d5175490c9eb8baa8fb6c99 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB1190 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB1190 7fcf33e14d5175490c9eb8baa8fb6c99 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB706 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB706 7fcf33e14d5175490c9eb8baa8fb6c99 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB706 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB706 7fcf33e14d5175490c9eb8baa8fb6c99 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB11750 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB11750 7fcf33e14d5175490c9eb8baa8fb6c99 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB11750 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB11750 7fcf33e14d5175490c9eb8baa8fb6c99 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB4300 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB4300 7fcf33e14d5175490c9eb8baa8fb6c99 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB4300 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB4300 7fcf33e14d5175490c9eb8baa8fb6c99 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12941 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB12941 7fcf33e14d5175490c9eb8baa8fb6c99 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12941 7fcf33e14d5175490c9eb8baa8fb6c99 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB12941 7fcf33e14d5175490c9eb8baa8fb6c99 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB148 d33423bb2c81661261728eb2fd37db97 683 SUPERFAMILY SSF52540 408 453 2.75E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB148 d33423bb2c81661261728eb2fd37db97 683 SUPERFAMILY SSF52540 31 286 2.75E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB148 d33423bb2c81661261728eb2fd37db97 683 SMART SM00957 27 442 4.4E-102 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RB148 d33423bb2c81661261728eb2fd37db97 683 Gene3D G3DSA:3.40.50.300 43 286 1.6E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB148 d33423bb2c81661261728eb2fd37db97 683 Gene3D G3DSA:3.40.50.300 409 452 1.6E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB148 d33423bb2c81661261728eb2fd37db97 683 SUPERFAMILY SSF52540 460 607 1.27E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB148 d33423bb2c81661261728eb2fd37db97 683 Pfam PF07517 SecA DEAD-like domain 35 442 7.9E-73 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RB148 d33423bb2c81661261728eb2fd37db97 683 Pfam PF01043 SecA preprotein cross-linking domain 299 398 1.7E-19 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB148 d33423bb2c81661261728eb2fd37db97 683 Gene3D G3DSA:3.90.1440.10 294 408 1.1E-26 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB148 d33423bb2c81661261728eb2fd37db97 683 SMART SM00958 289 398 3.8E-21 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB148 d33423bb2c81661261728eb2fd37db97 683 Gene3D G3DSA:3.40.50.300 458 609 1.1E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB148 d33423bb2c81661261728eb2fd37db97 683 SUPERFAMILY SSF81767 295 408 1.44E-26 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB148 d33423bb2c81661261728eb2fd37db97 683 PRINTS PR00906 SecA protein signature 96 120 1.3E-31 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB148 d33423bb2c81661261728eb2fd37db97 683 PRINTS PR00906 SecA protein signature 140 154 1.3E-31 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB148 d33423bb2c81661261728eb2fd37db97 683 PRINTS PR00906 SecA protein signature 379 401 1.3E-31 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB148 d33423bb2c81661261728eb2fd37db97 683 PRINTS PR00906 SecA protein signature 416 433 1.3E-31 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB148 d33423bb2c81661261728eb2fd37db97 683 PRINTS PR00906 SecA protein signature 209 229 1.3E-31 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB148 d33423bb2c81661261728eb2fd37db97 683 PRINTS PR00906 SecA protein signature 156 166 1.3E-31 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11273 2db2e8efc27b0a7ea21150c7a5ed4590 408 Gene3D G3DSA:1.20.1250.20 15 192 4.8E-26 T 11-11-2016 RB11273 2db2e8efc27b0a7ea21150c7a5ed4590 408 SUPERFAMILY SSF103473 15 394 3.27E-49 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB11273 2db2e8efc27b0a7ea21150c7a5ed4590 408 Pfam PF07690 Major Facilitator Superfamily 19 359 2.6E-35 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB9898 9b4f4f6782b6d24b669ed14d4f68a907 208 Gene3D G3DSA:3.40.50.880 16 202 5.2E-39 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9898 9b4f4f6782b6d24b669ed14d4f68a907 208 SUPERFAMILY SSF52317 21 186 2.45E-38 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9898 9b4f4f6782b6d24b669ed14d4f68a907 208 Pfam PF01965 DJ-1/PfpI family 23 186 4.8E-31 T 11-11-2016 IPR002818 DJ-1/PfpI RB11494 07e1251a7cc698f0c73b032ee713c50b 293 Gene3D G3DSA:3.40.50.720 6 224 8.1E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11494 07e1251a7cc698f0c73b032ee713c50b 293 Pfam PF13460 NAD(P)H-binding 15 159 2.8E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11494 07e1251a7cc698f0c73b032ee713c50b 293 SUPERFAMILY SSF51735 9 238 2.16E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 SUPERFAMILY SSF48256 71 495 1.02E-162 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 Gene3D G3DSA:1.10.230.10 347 440 1.3E-38 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 ProSitePatterns PS00480 Citrate synthase signature. 370 382 - T 11-11-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 79 489 3.1E-188 T 11-11-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 PRINTS PR00143 Citrate synthase signature 285 300 8.1E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 PRINTS PR00143 Citrate synthase signature 426 442 8.1E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 PRINTS PR00143 Citrate synthase signature 307 335 8.1E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 PRINTS PR00143 Citrate synthase signature 363 383 8.1E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 PRINTS PR00143 Citrate synthase signature 231 244 8.1E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 PRINTS PR00143 Citrate synthase signature 446 460 8.1E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 Gene3D G3DSA:1.10.580.10 119 346 4.2E-95 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RB6683 37650ca8cff93c88b960b0b2d085ed0a 495 Pfam PF00285 Citrate synthase, C-terminal domain 112 478 2.7E-135 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 RB7584 c94cde1e3be7116af8bdc505ff7a7020 500 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 8 493 53.671 T 11-11-2016 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 RB7584 c94cde1e3be7116af8bdc505ff7a7020 500 Pfam PF00266 Aminotransferase class-V 147 280 4.3E-12 T 11-11-2016 IPR000192 Aminotransferase class V domain RB7584 c94cde1e3be7116af8bdc505ff7a7020 500 SUPERFAMILY SSF53383 27 491 3.93E-100 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB7584 c94cde1e3be7116af8bdc505ff7a7020 500 Gene3D G3DSA:3.40.640.10 87 288 9.4E-31 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB12326 b125f848a2449342b4b964e956cee40c 718 SMART SM00388 349 415 1.1E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB12326 b125f848a2449342b4b964e956cee40c 718 SUPERFAMILY SSF47384 332 416 9.42E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB12326 b125f848a2449342b4b964e956cee40c 718 Gene3D G3DSA:3.40.50.2300 592 716 1.6E-33 T 11-11-2016 RB12326 b125f848a2449342b4b964e956cee40c 718 SUPERFAMILY SSF55874 404 577 7.2E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12326 b125f848a2449342b4b964e956cee40c 718 SUPERFAMILY SSF52172 594 715 2.56E-33 T 11-11-2016 IPR011006 CheY-like superfamily RB12326 b125f848a2449342b4b964e956cee40c 718 SMART SM00091 204 269 4.9E-4 T 11-11-2016 IPR000014 PAS domain RB12326 b125f848a2449342b4b964e956cee40c 718 SMART SM00387 462 576 4.1E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12326 b125f848a2449342b4b964e956cee40c 718 SMART SM00065 54 200 8.3E-19 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB12326 b125f848a2449342b4b964e956cee40c 718 Pfam PF01590 GAF domain 56 190 1.2E-12 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB12326 b125f848a2449342b4b964e956cee40c 718 Pfam PF00072 Response regulator receiver domain 597 707 7.3E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12326 b125f848a2449342b4b964e956cee40c 718 Gene3D G3DSA:3.30.565.10 402 578 5.0E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12326 b125f848a2449342b4b964e956cee40c 718 Gene3D G3DSA:3.30.450.20 204 320 4.9E-18 T 11-11-2016 RB12326 b125f848a2449342b4b964e956cee40c 718 Pfam PF00512 His Kinase A (phospho-acceptor) domain 350 414 9.4E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB12326 b125f848a2449342b4b964e956cee40c 718 Pfam PF08448 PAS fold 212 323 4.5E-9 T 11-11-2016 IPR013656 PAS fold-4 RB12326 b125f848a2449342b4b964e956cee40c 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 573 1.7E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12326 b125f848a2449342b4b964e956cee40c 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 513 1.7E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12326 b125f848a2449342b4b964e956cee40c 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 527 1.7E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12326 b125f848a2449342b4b964e956cee40c 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 552 1.7E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12326 b125f848a2449342b4b964e956cee40c 718 SUPERFAMILY SSF55785 191 320 2.27E-16 T 11-11-2016 IPR000014 PAS domain RB12326 b125f848a2449342b4b964e956cee40c 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 203 322 2.2E-13 T 11-11-2016 IPR000014 PAS domain RB12326 b125f848a2449342b4b964e956cee40c 718 SMART SM00448 595 708 8.2E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12326 b125f848a2449342b4b964e956cee40c 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 573 4.9E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12326 b125f848a2449342b4b964e956cee40c 718 Gene3D G3DSA:1.10.287.130 343 401 2.7E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB12326 b125f848a2449342b4b964e956cee40c 718 Gene3D G3DSA:3.30.450.40 55 203 1.7E-24 T 11-11-2016 IPR029016 GAF domain-like RB12326 b125f848a2449342b4b964e956cee40c 718 SUPERFAMILY SSF55781 56 201 1.46E-27 T 11-11-2016 IPR029016 GAF domain-like RB12812 c84807293145b9d362879d17646e74c5 407 SUPERFAMILY SSF53901 36 383 4.07E-39 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB12812 c84807293145b9d362879d17646e74c5 407 Pfam PF00108 Thiolase, N-terminal domain 105 188 3.0E-7 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RB12812 c84807293145b9d362879d17646e74c5 407 Gene3D G3DSA:3.40.47.10 41 225 2.1E-30 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB12812 c84807293145b9d362879d17646e74c5 407 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 294 379 2.4E-14 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RB12812 c84807293145b9d362879d17646e74c5 407 Gene3D G3DSA:3.40.47.10 226 385 2.8E-22 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 Gene3D G3DSA:3.30.200.20 34 96 3.2E-37 T 11-11-2016 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 Gene3D G3DSA:3.30.200.20 133 154 3.2E-37 T 11-11-2016 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 SUPERFAMILY SSF56104 35 331 5.89E-91 T 11-11-2016 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 ProSitePatterns PS01058 SAICAR synthetase signature 2. 241 249 - T 11-11-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 36 328 7.1E-65 T 11-11-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 Pfam PF01259 SAICAR synthetase 36 304 3.7E-98 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 Gene3D G3DSA:3.30.470.20 155 283 3.4E-51 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 ProSitePatterns PS01057 SAICAR synthetase signature 1. 143 157 - T 11-11-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB12194 41a8322b14cea9d125bdc57c4b9a707e 332 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 31 328 23.47 T 11-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB11194 e1e0696d43872e45f991a5db6b50cc7e 127 Pfam PF03831 PhnA domain 60 127 1.4E-33 T 11-11-2016 IPR013988 PhnA protein, C-terminal RB11194 e1e0696d43872e45f991a5db6b50cc7e 127 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 18 127 1.7E-45 T 11-11-2016 IPR004624 PhnA protein RB11194 e1e0696d43872e45f991a5db6b50cc7e 127 Gene3D G3DSA:2.30.30.40 59 127 2.3E-36 T 11-11-2016 RB11194 e1e0696d43872e45f991a5db6b50cc7e 127 SUPERFAMILY SSF57783 18 52 3.57E-13 T 11-11-2016 RB11194 e1e0696d43872e45f991a5db6b50cc7e 127 Gene3D G3DSA:2.20.25.10 16 56 3.0E-21 T 11-11-2016 RB11194 e1e0696d43872e45f991a5db6b50cc7e 127 Pfam PF08274 PhnA Zinc-Ribbon 19 47 1.3E-14 T 11-11-2016 IPR013987 PhnA protein, N-terminal RB11194 e1e0696d43872e45f991a5db6b50cc7e 127 SUPERFAMILY SSF82057 57 127 2.29E-28 T 11-11-2016 RB12824 8565e73785ae0dbc06245d738ba0c321 146 Pfam PF00886 Ribosomal protein S16 9 69 3.2E-23 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12824 8565e73785ae0dbc06245d738ba0c321 146 Gene3D G3DSA:3.30.1320.10 2 80 2.8E-30 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12824 8565e73785ae0dbc06245d738ba0c321 146 SUPERFAMILY SSF54565 2 85 9.16E-29 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12824 8565e73785ae0dbc06245d738ba0c321 146 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 79 22.216 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12824 8565e73785ae0dbc06245d738ba0c321 146 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 3.5E-28 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 Pfam PF01043 SecA preprotein cross-linking domain 340 453 2.0E-20 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 SUPERFAMILY SSF81767 338 461 1.2E-27 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 SMART SM00957 87 497 1.9E-176 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 Gene3D G3DSA:3.40.50.300 99 330 9.2E-86 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2013 c81a055b8425d5a4aa4cb158a0552285 733 Gene3D G3DSA:3.40.50.300 464 511 9.2E-86 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2013 c81a055b8425d5a4aa4cb158a0552285 733 Pfam PF07517 SecA DEAD-like domain 93 496 6.2E-103 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 Gene3D G3DSA:3.90.1440.10 339 461 2.3E-29 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 Pfam PF00271 Helicase conserved C-terminal domain 529 645 1.1E-4 T 11-11-2016 IPR001650 Helicase, C-terminal RB2013 c81a055b8425d5a4aa4cb158a0552285 733 SMART SM00958 334 453 2.4E-24 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 PRINTS PR00906 SecA protein signature 252 272 1.7E-54 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 PRINTS PR00906 SecA protein signature 434 456 1.7E-54 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 PRINTS PR00906 SecA protein signature 471 488 1.7E-54 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 PRINTS PR00906 SecA protein signature 183 197 1.7E-54 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 PRINTS PR00906 SecA protein signature 145 169 1.7E-54 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 PRINTS PR00906 SecA protein signature 199 209 1.7E-54 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 PRINTS PR00906 SecA protein signature 508 521 1.7E-54 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 ProSitePatterns PS01312 SecA family signature. 595 610 - T 11-11-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 Hamap MF_01382 Protein translocase subunit SecA [secA]. 86 733 14.558 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB2013 c81a055b8425d5a4aa4cb158a0552285 733 Gene3D G3DSA:3.40.50.300 514 662 2.1E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2013 c81a055b8425d5a4aa4cb158a0552285 733 SUPERFAMILY SSF52540 512 661 9.12E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2013 c81a055b8425d5a4aa4cb158a0552285 733 SUPERFAMILY SSF52540 99 330 9.31E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2013 c81a055b8425d5a4aa4cb158a0552285 733 SUPERFAMILY SSF52540 463 510 9.31E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11242 90708003961a48720f358ff0c9c66355 201 SUPERFAMILY SSF88946 20 99 1.73E-17 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11242 90708003961a48720f358ff0c9c66355 201 Gene3D G3DSA:1.10.1740.10 11 116 3.5E-18 T 11-11-2016 RB11242 90708003961a48720f358ff0c9c66355 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 189 8.7E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11242 90708003961a48720f358ff0c9c66355 201 Pfam PF04542 Sigma-70 region 2 28 94 3.6E-14 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4759 078df554a8e68eadf856e03e18d78415 418 SMART SM00387 309 415 1.1E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4759 078df554a8e68eadf856e03e18d78415 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 204 267 1.3E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4759 078df554a8e68eadf856e03e18d78415 418 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 412 3.5E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4759 078df554a8e68eadf856e03e18d78415 418 Gene3D G3DSA:3.30.565.10 271 413 3.8E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4759 078df554a8e68eadf856e03e18d78415 418 Pfam PF13426 PAS domain 58 162 2.9E-15 T 11-11-2016 IPR000014 PAS domain RB4759 078df554a8e68eadf856e03e18d78415 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 393 3.2E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4759 078df554a8e68eadf856e03e18d78415 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 3.2E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4759 078df554a8e68eadf856e03e18d78415 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 374 3.2E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4759 078df554a8e68eadf856e03e18d78415 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 412 3.2E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4759 078df554a8e68eadf856e03e18d78415 418 Gene3D G3DSA:3.30.450.20 44 161 3.0E-25 T 11-11-2016 RB4759 078df554a8e68eadf856e03e18d78415 418 SUPERFAMILY SSF55785 58 172 2.39E-30 T 11-11-2016 IPR000014 PAS domain RB4759 078df554a8e68eadf856e03e18d78415 418 SMART SM00388 203 270 4.6E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4759 078df554a8e68eadf856e03e18d78415 418 SMART SM00091 47 113 2.8E-12 T 11-11-2016 IPR000014 PAS domain RB4759 078df554a8e68eadf856e03e18d78415 418 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 44 170 3.3E-31 T 11-11-2016 IPR000014 PAS domain RB4759 078df554a8e68eadf856e03e18d78415 418 SUPERFAMILY SSF47384 198 269 1.29E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4759 078df554a8e68eadf856e03e18d78415 418 SUPERFAMILY SSF55874 263 413 1.31E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4759 078df554a8e68eadf856e03e18d78415 418 Gene3D G3DSA:1.10.287.130 202 266 2.0E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF47336 3283 3355 1.57E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 580 886 2.5E-109 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF51735 1631 1793 2.33E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF14765 Polyketide synthase dehydratase 960 1260 1.3E-45 T 11-11-2016 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.30.70.250 704 775 1.7E-7 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SMART SM00825 Beta-ketoacyl synthase 23 451 1.4E-209 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF47336 2143 2216 4.71E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1867 2047 8.3E-53 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.50.720 1866 2049 1.6E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.50.720 2097 2117 1.6E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2908 2919 - T 11-11-2016 IPR020845 AMP-binding, conserved site RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF51735 1864 2100 3.73E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.50.1820 3581 3648 9.7E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.50.1820 3389 3503 9.7E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF00698 Acyl transferase domain 578 888 4.5E-66 T 11-11-2016 IPR014043 Acyl transferase RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF55048 705 775 3.79E-11 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF50129 1530 1657 8.33E-28 T 11-11-2016 IPR011032 GroES-like RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SMART SM00829 1531 1844 6.7E-137 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:1.10.1200.10 2143 2215 1.3E-8 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.30.300.30 3157 3294 4.8E-30 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF08659 KR domain 1867 2044 2.5E-64 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:2.30.38.10 3076 3150 6.8E-17 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.90.180.10 1534 1664 1.8E-38 T 11-11-2016 IPR011032 GroES-like RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.47.10 19 284 1.2E-96 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.366.10 577 700 3.5E-70 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.366.10 776 885 3.5E-70 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2169 2184 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF00975 Thioesterase domain 3400 3641 9.6E-32 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF13745 HxxPF-repeated domain 2569 2674 3.8E-16 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF53474 3387 3647 7.23E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF13193 AMP-binding enzyme C-terminal domain 3169 3262 2.2E-8 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF00107 Zinc-binding dehydrogenase 1670 1775 3.0E-16 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 185 201 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:1.10.1200.10 3295 3357 3.7E-20 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF52777 2439 2695 4.22E-49 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 401 513 8.7E-14 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SMART SM00824 Thioesterase 3412 3647 2.5E-7 T 11-11-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF00668 Condensation domain 2246 2547 4.2E-62 T 11-11-2016 IPR001242 Condensation domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 21 272 3.1E-88 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF56801 2791 3302 2.35E-111 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.50.980 2917 3075 9.9E-35 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 280 398 7.0E-40 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF00501 AMP-binding enzyme 2791 3160 1.0E-63 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SMART SM00823 Phosphopantetheine attachment site 2143 2214 6.7E-17 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SMART SM00823 Phosphopantetheine attachment site 3289 3358 3.0E-10 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF00550 Phosphopantetheine attachment site 2150 2209 7.6E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF00550 Phosphopantetheine attachment site 3292 3353 3.0E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3313 3328 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.50.720 1665 1761 2.0E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.47.10 286 452 2.3E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1548 1607 4.1E-7 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF52151 777 872 2.25E-62 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF52151 577 706 2.25E-62 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 Gene3D G3DSA:3.40.50.980 2791 2916 1.7E-20 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF53901 19 141 6.7E-99 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF53901 168 394 6.7E-99 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF53901 426 446 6.7E-99 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF51735 1262 1502 5.51E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SUPERFAMILY SSF52777 2250 2428 5.67E-41 T 11-11-2016 RB6500 1b2404b9b7706e7a648ab56edbd128ff 3665 SMART SM00826 960 1130 7.2E-27 T 11-11-2016 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB13005 685bb1c6591906ce94596242431919be 604 SUPERFAMILY SSF81901 104 267 4.27E-42 T 11-11-2016 RB13005 685bb1c6591906ce94596242431919be 604 SUPERFAMILY SSF81901 246 412 6.45E-42 T 11-11-2016 RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 185 220 1.2E-6 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 403 436 1.7E-5 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 368 399 1.2E-5 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 149 183 2.3E-9 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 223 252 0.34 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 258 292 1.7E-10 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 511 544 1.7E-7 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 113 147 1.6E-10 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 473 506 1.3E-7 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 294 328 1.8E-4 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 330 363 2.7E-7 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 Pfam PF08238 Sel1 repeat 437 470 6.1E-11 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 509 544 3.3E-11 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 149 184 2.3E-9 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 185 220 4.1E-9 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 401 436 6.6E-4 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 293 328 2.9E-6 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 257 292 8.9E-11 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 221 256 6.4 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 113 148 1.4E-10 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 365 400 0.024 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 437 472 2.9E-11 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 473 508 4.1E-9 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SMART SM00671 329 364 9.8E-8 T 11-11-2016 IPR006597 Sel1-like repeat RB13005 685bb1c6591906ce94596242431919be 604 SUPERFAMILY SSF81901 388 552 1.48E-43 T 11-11-2016 RB13005 685bb1c6591906ce94596242431919be 604 Gene3D G3DSA:1.25.40.10 466 552 2.5E-28 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13005 685bb1c6591906ce94596242431919be 604 Gene3D G3DSA:1.25.40.10 392 465 9.5E-26 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13005 685bb1c6591906ce94596242431919be 604 Gene3D G3DSA:1.25.40.10 104 192 6.9E-27 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13005 685bb1c6591906ce94596242431919be 604 Gene3D G3DSA:1.25.40.10 195 326 2.6E-38 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13005 685bb1c6591906ce94596242431919be 604 Gene3D G3DSA:1.25.40.10 327 391 7.5E-23 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9561 cfa800b3658dee38d408d93309ecb2af 247 Pfam PF08281 Sigma-70, region 4 181 231 5.6E-8 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9561 cfa800b3658dee38d408d93309ecb2af 247 SUPERFAMILY SSF88659 177 236 3.36E-10 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9561 cfa800b3658dee38d408d93309ecb2af 247 Pfam PF04542 Sigma-70 region 2 89 152 3.7E-8 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9561 cfa800b3658dee38d408d93309ecb2af 247 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 80 237 2.6E-50 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB9561 cfa800b3658dee38d408d93309ecb2af 247 Gene3D G3DSA:1.10.1740.10 80 168 8.8E-14 T 11-11-2016 RB9561 cfa800b3658dee38d408d93309ecb2af 247 SUPERFAMILY SSF88946 77 166 1.53E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9561 cfa800b3658dee38d408d93309ecb2af 247 Gene3D G3DSA:1.10.10.10 177 237 3.9E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9561 cfa800b3658dee38d408d93309ecb2af 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 236 4.4E-17 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7435 afe9861caed04dba96bd8e10b9782a4e 257 Pfam PF02673 Bacitracin resistance protein BacA 8 249 4.1E-67 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RB7435 afe9861caed04dba96bd8e10b9782a4e 257 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 255 16.709 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RB4580 b11f6c8f01a1f92bd6ac902373902000 794 SUPERFAMILY SSF109604 703 729 4.35E-18 T 11-11-2016 RB4580 b11f6c8f01a1f92bd6ac902373902000 794 SUPERFAMILY SSF109604 572 675 4.35E-18 T 11-11-2016 RB4580 b11f6c8f01a1f92bd6ac902373902000 794 TIGRFAM TIGR00277 HDIG: HDIG domain 578 675 1.5E-23 T 11-11-2016 IPR006675 HDIG domain RB4580 b11f6c8f01a1f92bd6ac902373902000 794 Gene3D G3DSA:1.10.3210.10 708 747 7.8E-27 T 11-11-2016 IPR006674 HD domain RB4580 b11f6c8f01a1f92bd6ac902373902000 794 Gene3D G3DSA:1.10.3210.10 575 675 7.8E-27 T 11-11-2016 IPR006674 HD domain RB4580 b11f6c8f01a1f92bd6ac902373902000 794 Pfam PF07697 7TM-HD extracellular 73 329 2.0E-13 T 11-11-2016 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain RB4580 b11f6c8f01a1f92bd6ac902373902000 794 Pfam PF07698 7TM receptor with intracellular HD hydrolase 356 555 1.5E-12 T 11-11-2016 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain RB4580 b11f6c8f01a1f92bd6ac902373902000 794 Pfam PF01966 HD domain 580 726 4.8E-18 T 11-11-2016 IPR006674 HD domain RB4580 b11f6c8f01a1f92bd6ac902373902000 794 SMART SM00471 576 737 1.0E-10 T 11-11-2016 IPR003607 HD/PDEase domain RB3816 c1dc958b9f86718b59b3eacbb5f416b2 303 SUPERFAMILY SSF51735 9 169 1.17E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3816 c1dc958b9f86718b59b3eacbb5f416b2 303 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 168 8.6E-48 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RB3816 c1dc958b9f86718b59b3eacbb5f416b2 303 Gene3D G3DSA:3.40.50.720 8 170 9.1E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3816 c1dc958b9f86718b59b3eacbb5f416b2 303 Gene3D G3DSA:1.10.1040.10 171 298 4.3E-43 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RB3816 c1dc958b9f86718b59b3eacbb5f416b2 303 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 288 1.1E-37 T 11-11-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RB3816 c1dc958b9f86718b59b3eacbb5f416b2 303 SUPERFAMILY SSF48179 170 292 9.86E-38 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB3816 c1dc958b9f86718b59b3eacbb5f416b2 303 PIRSF PIRSF000103 3 299 1.0E-65 T 11-11-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 RB6991 539d83e25a0614ebb170cca7c6511284 499 Gene3D G3DSA:1.25.40.10 171 236 2.5E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6991 539d83e25a0614ebb170cca7c6511284 499 Gene3D G3DSA:1.25.10.10 329 408 1.4E-4 T 11-11-2016 IPR011989 Armadillo-like helical RB6991 539d83e25a0614ebb170cca7c6511284 499 SUPERFAMILY SSF48371 325 416 9.21E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB13327 fd4f5833d8ce324455afb6690f6b7e4b 421 Pfam PF13633 Prokaryotic N-terminal methylation site 17 42 2.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13327 fd4f5833d8ce324455afb6690f6b7e4b 421 Pfam PF07596 Protein of unknown function (DUF1559) 43 379 1.7E-62 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB13327 fd4f5833d8ce324455afb6690f6b7e4b 421 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13327 fd4f5833d8ce324455afb6690f6b7e4b 421 SUPERFAMILY SSF54523 19 169 2.59E-28 T 11-11-2016 RB13327 fd4f5833d8ce324455afb6690f6b7e4b 421 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 6.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13327 fd4f5833d8ce324455afb6690f6b7e4b 421 Gene3D G3DSA:3.30.700.10 19 93 9.6E-9 T 11-11-2016 RB10206 93b6ec62c329a4c40ffc212975e5dde3 349 Hamap MF_01393 ATP synthase subunit a [atpB]. 48 308 12.018 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB10206 93b6ec62c329a4c40ffc212975e5dde3 349 Pfam PF00119 ATP synthase A chain 57 301 7.2E-41 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB10206 93b6ec62c329a4c40ffc212975e5dde3 349 SUPERFAMILY SSF81336 117 301 1.07E-31 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB10206 93b6ec62c329a4c40ffc212975e5dde3 349 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 63 302 1.9E-31 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB10206 93b6ec62c329a4c40ffc212975e5dde3 349 PRINTS PR00123 ATP synthase A subunit signature 288 303 7.9E-6 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB10206 93b6ec62c329a4c40ffc212975e5dde3 349 PRINTS PR00123 ATP synthase A subunit signature 124 140 7.9E-6 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB10206 93b6ec62c329a4c40ffc212975e5dde3 349 Gene3D G3DSA:1.20.120.220 119 306 1.2E-35 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB12327 fa07bfaa24f56fcd10f26cf2aca25f88 686 SUPERFAMILY SSF103473 42 416 7.32E-29 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB12327 fa07bfaa24f56fcd10f26cf2aca25f88 686 SUPERFAMILY SSF103473 636 661 7.32E-29 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB12327 fa07bfaa24f56fcd10f26cf2aca25f88 686 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 90 114 - T 11-11-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RB12327 fa07bfaa24f56fcd10f26cf2aca25f88 686 Gene3D G3DSA:1.20.1250.20 637 663 3.7E-6 T 11-11-2016 RB12327 fa07bfaa24f56fcd10f26cf2aca25f88 686 Gene3D G3DSA:1.20.1250.20 252 417 3.7E-6 T 11-11-2016 RB12327 fa07bfaa24f56fcd10f26cf2aca25f88 686 Gene3D G3DSA:1.20.1250.20 38 219 4.9E-14 T 11-11-2016 RB12327 fa07bfaa24f56fcd10f26cf2aca25f88 686 Pfam PF00854 POT family 243 413 2.1E-38 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 RB12327 fa07bfaa24f56fcd10f26cf2aca25f88 686 Pfam PF00854 POT family 101 229 1.1E-41 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PIRSF PIRSF000350 6 487 5.3E-101 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 32 344 4.1E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11205 f457fc50a8a93590269a94de81cbcfda 507 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 66 76 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 448 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 368 389 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 300 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 328 335 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 199 224 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 33 55 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 65 80 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 455 475 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 172 5.2E-54 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 SUPERFAMILY SSF55424 371 481 2.92E-33 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RB11205 f457fc50a8a93590269a94de81cbcfda 507 Gene3D G3DSA:3.50.50.60 31 169 1.1E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 4.2E-30 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 301 4.2E-30 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 313 335 4.2E-30 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 34 53 4.2E-30 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 4.2E-30 T 11-11-2016 RB11205 f457fc50a8a93590269a94de81cbcfda 507 Gene3D G3DSA:3.30.390.30 369 483 3.1E-36 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB11205 f457fc50a8a93590269a94de81cbcfda 507 Gene3D G3DSA:3.50.50.60 170 354 3.0E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11205 f457fc50a8a93590269a94de81cbcfda 507 SUPERFAMILY SSF51905 22 394 3.7E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11205 f457fc50a8a93590269a94de81cbcfda 507 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 372 479 3.9E-29 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB130 2374efd3465192801bd7463b2ce87b43 413 Gene3D G3DSA:3.30.700.10 10 77 1.3E-4 T 11-11-2016 RB130 2374efd3465192801bd7463b2ce87b43 413 Pfam PF07596 Protein of unknown function (DUF1559) 34 371 2.3E-49 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB130 2374efd3465192801bd7463b2ce87b43 413 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 2.2E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB130 2374efd3465192801bd7463b2ce87b43 413 SUPERFAMILY SSF54523 10 176 3.14E-22 T 11-11-2016 RB130 2374efd3465192801bd7463b2ce87b43 413 Pfam PF13633 Prokaryotic N-terminal methylation site 8 33 9.1E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB2349 47fe3acf31f4b085e983b362a35cd336 417 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 7 30 1.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB2349 47fe3acf31f4b085e983b362a35cd336 417 SUPERFAMILY SSF54523 11 156 2.12E-21 T 11-11-2016 RB2349 47fe3acf31f4b085e983b362a35cd336 417 Gene3D G3DSA:3.30.700.10 11 74 9.9E-6 T 11-11-2016 RB2349 47fe3acf31f4b085e983b362a35cd336 417 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 1.0E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB2349 47fe3acf31f4b085e983b362a35cd336 417 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB2349 47fe3acf31f4b085e983b362a35cd336 417 Pfam PF07596 Protein of unknown function (DUF1559) 35 383 2.3E-49 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 SUPERFAMILY SSF53927 214 523 7.82E-110 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 Pfam PF01808 AICARFT/IMPCHase bienzyme 139 457 1.9E-103 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 Gene3D G3DSA:3.40.50.1380 5 191 1.6E-76 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 523 42.439 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 Pfam PF02142 MGS-like domain 19 133 2.3E-26 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 Gene3D G3DSA:3.40.140.20 245 366 3.9E-35 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 Gene3D G3DSA:3.40.140.20 374 513 1.3E-51 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 SMART SM00798 139 458 4.1E-166 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 SUPERFAMILY SSF52335 7 197 3.4E-64 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 PIRSF PIRSF000414 2 523 4.3E-208 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 523 7.4E-185 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB10113 8f2e64b2c3aa58bb08a270ff87d84987 523 SMART SM00851 19 134 1.1E-52 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain RB5259 7f90a708455e39c422e512bddaeabbc0 914 SUPERFAMILY SSF52540 556 785 1.73E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5259 7f90a708455e39c422e512bddaeabbc0 914 Pfam PF00271 Helicase conserved C-terminal domain 635 745 1.1E-19 T 11-11-2016 IPR001650 Helicase, C-terminal RB5259 7f90a708455e39c422e512bddaeabbc0 914 SUPERFAMILY SSF52540 340 553 4.97E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5259 7f90a708455e39c422e512bddaeabbc0 914 SMART SM00487 342 524 2.7E-28 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB5259 7f90a708455e39c422e512bddaeabbc0 914 SMART SM00490 663 745 3.9E-21 T 11-11-2016 IPR001650 Helicase, C-terminal RB5259 7f90a708455e39c422e512bddaeabbc0 914 Gene3D G3DSA:3.40.50.300 341 509 5.8E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5259 7f90a708455e39c422e512bddaeabbc0 914 Pfam PF00176 SNF2 family N-terminal domain 364 600 3.5E-40 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RB5259 7f90a708455e39c422e512bddaeabbc0 914 Gene3D G3DSA:3.40.50.300 631 753 3.1E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 Gene3D G3DSA:2.60.34.10 355 547 8.3E-45 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 Gene3D G3DSA:3.30.420.40 17 182 8.1E-50 T 11-11-2016 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 321 335 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 Gene3D G3DSA:3.90.640.10 215 299 3.1E-10 T 11-11-2016 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 181 194 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 Gene3D G3DSA:3.30.420.40 183 214 4.9E-28 T 11-11-2016 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 Gene3D G3DSA:3.30.420.40 303 345 4.9E-28 T 11-11-2016 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 SUPERFAMILY SSF53067 176 365 2.4E-49 T 11-11-2016 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 PRINTS PR00301 70kDa heat shock protein signature 349 369 1.7E-44 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 PRINTS PR00301 70kDa heat shock protein signature 374 393 1.7E-44 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 PRINTS PR00301 70kDa heat shock protein signature 127 147 1.7E-44 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 PRINTS PR00301 70kDa heat shock protein signature 318 334 1.7E-44 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 PRINTS PR00301 70kDa heat shock protein signature 187 197 1.7E-44 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 PRINTS PR00301 70kDa heat shock protein signature 16 29 1.7E-44 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 PRINTS PR00301 70kDa heat shock protein signature 462 478 1.7E-44 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 PRINTS PR00301 70kDa heat shock protein signature 44 56 1.7E-44 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 SUPERFAMILY SSF53067 17 172 4.21E-47 T 11-11-2016 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 SUPERFAMILY SSF100920 372 526 2.62E-33 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 Pfam PF00012 Hsp70 protein 18 89 1.1E-15 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 Pfam PF00012 Hsp70 protein 96 556 1.8E-123 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB2429 bfb25f43b07dabb3f3099cd9360ce1d2 587 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 20 27 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB2872 284003c09abe68315020985a30b70aad 659 SUPERFAMILY SSF55785 281 407 1.68E-15 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 SMART SM00387 536 646 3.2E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2872 284003c09abe68315020985a30b70aad 659 SUPERFAMILY SSF55785 78 166 2.62E-9 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 SUPERFAMILY SSF55785 155 282 1.24E-20 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 539 645 4.7E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2872 284003c09abe68315020985a30b70aad 659 Pfam PF13426 PAS domain 308 408 0.05 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 Pfam PF00512 His Kinase A (phospho-acceptor) domain 430 494 6.9E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2872 284003c09abe68315020985a30b70aad 659 Gene3D G3DSA:3.30.565.10 512 646 1.3E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2872 284003c09abe68315020985a30b70aad 659 SUPERFAMILY SSF55874 486 644 2.1E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2872 284003c09abe68315020985a30b70aad 659 SMART SM00091 170 235 8.3E-10 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 SMART SM00091 296 362 0.058 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 SUPERFAMILY SSF47384 413 495 8.83E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2872 284003c09abe68315020985a30b70aad 659 SMART SM00086 369 409 12.0 T 11-11-2016 IPR001610 PAC motif RB2872 284003c09abe68315020985a30b70aad 659 SMART SM00086 242 284 410.0 T 11-11-2016 IPR001610 PAC motif RB2872 284003c09abe68315020985a30b70aad 659 SMART SM00086 116 158 1.1E-4 T 11-11-2016 IPR001610 PAC motif RB2872 284003c09abe68315020985a30b70aad 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 643 7.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2872 284003c09abe68315020985a30b70aad 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 624 7.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2872 284003c09abe68315020985a30b70aad 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 601 7.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2872 284003c09abe68315020985a30b70aad 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 587 7.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2872 284003c09abe68315020985a30b70aad 659 Gene3D G3DSA:3.30.450.20 282 407 5.6E-15 T 11-11-2016 RB2872 284003c09abe68315020985a30b70aad 659 Pfam PF08448 PAS fold 176 283 4.7E-11 T 11-11-2016 IPR013656 PAS fold-4 RB2872 284003c09abe68315020985a30b70aad 659 Pfam PF08447 PAS fold 71 151 4.3E-8 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB2872 284003c09abe68315020985a30b70aad 659 Gene3D G3DSA:1.10.287.130 420 493 6.1E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2872 284003c09abe68315020985a30b70aad 659 Gene3D G3DSA:3.30.450.20 83 168 4.1E-12 T 11-11-2016 RB2872 284003c09abe68315020985a30b70aad 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 172 291 3.3E-14 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 293 413 1.0E-10 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 87 165 8.5E-6 T 11-11-2016 IPR000014 PAS domain RB2872 284003c09abe68315020985a30b70aad 659 Gene3D G3DSA:3.30.450.20 169 281 2.3E-21 T 11-11-2016 RB2872 284003c09abe68315020985a30b70aad 659 SMART SM00388 429 497 7.4E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF00989 PAS fold 870 976 6.0E-13 T 11-11-2016 IPR013767 PAS fold GO:0006355 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF00989 PAS fold 1119 1233 1.5E-12 T 11-11-2016 IPR013767 PAS fold GO:0006355 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF55874 1311 1485 5.89E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF00072 Response regulator receiver domain 1517 1630 3.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:3.30.450.20 747 857 1.1E-8 T 11-11-2016 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1368 1482 5.1E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF13426 PAS domain 999 1103 2.3E-21 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF55785 1101 1233 1.66E-18 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 PRINTS PR00996 Glutamate methyltransferase family signature 328 348 6.7E-20 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 PRINTS PR00996 Glutamate methyltransferase family signature 253 266 6.7E-20 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 PRINTS PR00996 Glutamate methyltransferase family signature 364 380 6.7E-20 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 PRINTS PR00996 Glutamate methyltransferase family signature 430 444 6.7E-20 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 PRINTS PR00996 Glutamate methyltransferase family signature 290 302 6.7E-20 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 PRINTS PR00996 Glutamate methyltransferase family signature 449 472 6.7E-20 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:3.40.50.2300 1515 1635 2.8E-33 T 11-11-2016 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00086 1195 1236 1.1 T 11-11-2016 IPR001610 PAC motif RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00086 1062 1104 1.1E-8 T 11-11-2016 IPR001610 PAC motif RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00086 939 979 10.0 T 11-11-2016 IPR001610 PAC motif RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:3.30.450.20 998 1102 7.2E-35 T 11-11-2016 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1256 1320 2.2E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF01739 CheR methyltransferase, SAM binding domain 298 487 9.1E-51 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF52172 1515 1635 2.13E-30 T 11-11-2016 IPR011006 CheY-like superfamily RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:1.10.155.10 228 294 1.1E-13 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF55785 879 987 1.57E-20 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:3.30.565.10 1324 1483 8.8E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00138 231 490 7.7E-74 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:3.40.50.150 296 489 2.8E-59 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF55785 740 857 1.87E-8 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00388 1256 1321 2.4E-24 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:1.10.287.130 1252 1317 3.2E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF55785 996 1104 1.4E-26 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF53335 297 489 1.33E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1114 1243 1.8E-13 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 870 984 1.2E-19 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 985 1109 1.3E-17 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF01339 CheB methylesterase 33 208 3.5E-51 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF13596 PAS domain 755 857 3.5E-15 T 11-11-2016 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Pfam PF03705 CheR methyltransferase, all-alpha domain 234 282 5.5E-12 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00091 753 818 0.0031 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00091 868 934 1.9E-9 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00091 987 1060 7.8E-4 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00091 1116 1184 8.0E-4 T 11-11-2016 IPR000014 PAS domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF47757 224 299 2.88E-14 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:3.40.50.180 26 212 1.8E-59 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF52738 28 213 1.18E-53 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SUPERFAMILY SSF47384 1241 1322 1.16E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00448 1515 1631 2.6E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 SMART SM00387 1368 1483 2.2E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:3.30.450.20 1103 1233 4.7E-19 T 11-11-2016 RB4511 3d79c34b9861e7eebfaaf873c56ab804 1637 Gene3D G3DSA:3.30.450.20 868 977 3.8E-19 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 SMART SM00450 464 560 2.6E-8 T 11-11-2016 IPR001763 Rhodanese-like domain RB8937 89e700893c9ea340770a8745f7ebf33b 560 Pfam PF00581 Rhodanese-like domain 477 551 1.7E-4 T 11-11-2016 IPR001763 Rhodanese-like domain RB8937 89e700893c9ea340770a8745f7ebf33b 560 Gene3D G3DSA:3.50.50.60 128 328 6.4E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8937 89e700893c9ea340770a8745f7ebf33b 560 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 314 1.9E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8937 89e700893c9ea340770a8745f7ebf33b 560 Gene3D G3DSA:3.50.50.60 9 127 6.5E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8937 89e700893c9ea340770a8745f7ebf33b 560 Gene3D G3DSA:3.40.250.10 476 552 1.7E-17 T 11-11-2016 IPR001763 Rhodanese-like domain RB8937 89e700893c9ea340770a8745f7ebf33b 560 Gene3D G3DSA:3.30.390.30 351 460 1.2E-38 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 4.3E-23 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 265 4.3E-23 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 4.3E-23 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 117 135 4.3E-23 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 4.3E-23 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 SUPERFAMILY SSF52821 471 551 9.04E-19 T 11-11-2016 IPR001763 Rhodanese-like domain RB8937 89e700893c9ea340770a8745f7ebf33b 560 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 445 9.9E-13 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB8937 89e700893c9ea340770a8745f7ebf33b 560 SUPERFAMILY SSF55424 339 461 4.12E-32 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RB8937 89e700893c9ea340770a8745f7ebf33b 560 SUPERFAMILY SSF51905 6 328 5.77E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 3.4E-15 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 3.4E-15 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 250 264 3.4E-15 T 11-11-2016 RB8937 89e700893c9ea340770a8745f7ebf33b 560 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 3.4E-15 T 11-11-2016 RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Gene3D G3DSA:1.10.1330.10 1987 2049 1.1E-8 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SUPERFAMILY SSF63446 1983 2048 5.1E-9 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SUPERFAMILY SSF63825 166 399 7.06E-5 T 11-11-2016 RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Gene3D G3DSA:2.60.40.670 1422 1501 1.6E-7 T 11-11-2016 IPR000601 PKD domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Gene3D G3DSA:2.60.40.670 1023 1099 1.8E-4 T 11-11-2016 IPR000601 PKD domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SUPERFAMILY SSF49899 1740 1960 7.24E-26 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SMART SM00560 1804 1953 3.4E-4 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SMART SM00560 1572 1721 0.0014 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1797 1955 3.3E-16 T 11-11-2016 RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1565 1723 1.1E-15 T 11-11-2016 RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SUPERFAMILY SSF49299 983 1098 5.69E-5 T 11-11-2016 IPR000601 PKD domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SUPERFAMILY SSF49299 1423 1501 3.66E-7 T 11-11-2016 IPR000601 PKD domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 528 567 6.9E-7 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 803 850 6.9E-10 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 382 426 9.1E-16 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 617 663 2.0E-14 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 64 105 1.2E-13 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 852 894 5.0E-14 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 334 380 1.1E-17 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 569 614 1.8E-15 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 197 241 7.2E-19 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 666 710 7.8E-6 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 151 182 5.8E-9 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 245 289 3.6E-9 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 429 462 5.6E-8 T 11-11-2016 IPR030916 ELWxxDGT repeat RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Gene3D G3DSA:2.60.120.200 1503 1726 9.6E-20 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Gene3D G3DSA:2.60.120.200 1727 1959 5.2E-22 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SUPERFAMILY SSF49899 1508 1727 3.96E-25 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Pfam PF00404 Dockerin type I repeat 1987 2007 2.0E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Pfam PF00404 Dockerin type I repeat 2027 2047 7.7E-7 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 Gene3D G3DSA:2.60.40.670 1134 1190 6.0E-6 T 11-11-2016 IPR000601 PKD domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SMART SM00089 1013 1100 0.014 T 11-11-2016 IPR022409 PKD/Chitinase domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SMART SM00089 1121 1193 8.8 T 11-11-2016 IPR022409 PKD/Chitinase domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SMART SM00089 1417 1502 1.8 T 11-11-2016 IPR022409 PKD/Chitinase domain RB10423 e923ab99abc1797c1c30a81e9cc40508 2079 SUPERFAMILY SSF49299 1065 1190 2.26E-9 T 11-11-2016 IPR000601 PKD domain RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 SMART SM00487 345 530 3.3E-18 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 Pfam PF00271 Helicase conserved C-terminal domain 617 714 1.7E-8 T 11-11-2016 IPR001650 Helicase, C-terminal RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 Pfam PF08463 EcoEI R protein C-terminal 983 1128 1.8E-16 T 11-11-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 Gene3D G3DSA:3.40.50.300 349 514 4.2E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 SUPERFAMILY SSF52540 302 544 1.8E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 206 307 1.8E-6 T 11-11-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 SUPERFAMILY SSF52540 635 737 3.87E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 SUPERFAMILY SSF52540 372 420 3.87E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 Pfam PF13643 Domain of unknown function (DUF4145) 20 111 1.5E-10 T 11-11-2016 IPR025285 Domain of unknown function DUF4145 RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 Gene3D G3DSA:3.40.50.300 612 715 5.5E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11622 91e92e205779fd0a0e9d4dea4d0e6f01 1137 Pfam PF04851 Type III restriction enzyme, res subunit 348 503 1.8E-34 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RB10133 86473c160752af4c1f8934fa329eadaa 364 Gene3D G3DSA:1.10.510.10 86 269 1.2E-53 T 11-11-2016 RB10133 86473c160752af4c1f8934fa329eadaa 364 Pfam PF00069 Protein kinase domain 13 268 2.6E-49 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10133 86473c160752af4c1f8934fa329eadaa 364 SUPERFAMILY SSF56112 7 273 1.04E-73 T 11-11-2016 IPR011009 Protein kinase-like domain RB10133 86473c160752af4c1f8934fa329eadaa 364 Gene3D G3DSA:3.30.200.20 6 85 1.4E-15 T 11-11-2016 RB10133 86473c160752af4c1f8934fa329eadaa 364 SMART SM00220 10 279 4.3E-58 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10133 86473c160752af4c1f8934fa329eadaa 364 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 140 152 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB8533 2c511b58da6f478a32ab4336818a132d 196 Gene3D G3DSA:3.40.50.880 24 196 4.3E-45 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8533 2c511b58da6f478a32ab4336818a132d 196 SUPERFAMILY SSF52317 29 195 1.48E-44 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8533 2c511b58da6f478a32ab4336818a132d 196 Pfam PF01965 DJ-1/PfpI family 30 193 3.4E-41 T 11-11-2016 IPR002818 DJ-1/PfpI RB8533 2c511b58da6f478a32ab4336818a132d 196 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 35 195 1.9E-42 T 11-11-2016 IPR006286 Peptidase C56, PfpI RB7510 b3b9dd86588a9a346a15f2eafd4709b7 408 Pfam PF07075 Protein of unknown function (DUF1343) 54 407 1.7E-132 T 11-11-2016 IPR008302 Uncharacterised conserved protein UCP016719 RB7510 b3b9dd86588a9a346a15f2eafd4709b7 408 PIRSF PIRSF016719 1 408 2.5E-130 T 11-11-2016 IPR008302 Uncharacterised conserved protein UCP016719 RB7926 385a6507a78eb25f54cdc52971279f4d 242 Gene3D G3DSA:1.10.1740.10 30 109 9.9E-8 T 11-11-2016 RB7926 385a6507a78eb25f54cdc52971279f4d 242 Pfam PF04542 Sigma-70 region 2 39 105 1.8E-5 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7926 385a6507a78eb25f54cdc52971279f4d 242 Gene3D G3DSA:1.10.10.10 186 218 1.8E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7926 385a6507a78eb25f54cdc52971279f4d 242 SUPERFAMILY SSF88946 30 110 7.85E-7 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7745 d5d4a58f70822c6a9868196adf07f888 1047 SUPERFAMILY SSF103515 765 1047 1.06E-49 T 11-11-2016 IPR005546 Autotransporter beta-domain RB7745 d5d4a58f70822c6a9868196adf07f888 1047 SUPERFAMILY SSF103515 678 705 1.06E-49 T 11-11-2016 IPR005546 Autotransporter beta-domain RB7745 d5d4a58f70822c6a9868196adf07f888 1047 Pfam PF03797 Autotransporter beta-domain 768 1031 2.4E-47 T 11-11-2016 IPR005546 Autotransporter beta-domain RB7745 d5d4a58f70822c6a9868196adf07f888 1047 SUPERFAMILY SSF51126 243 596 4.08E-5 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB7745 d5d4a58f70822c6a9868196adf07f888 1047 Gene3D G3DSA:2.40.128.130 768 1047 3.9E-51 T 11-11-2016 IPR005546 Autotransporter beta-domain RB7745 d5d4a58f70822c6a9868196adf07f888 1047 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 517 1034 1.0E-15 T 11-11-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 RB7745 d5d4a58f70822c6a9868196adf07f888 1047 SMART SM00869 769 1037 1.1E-39 T 11-11-2016 IPR005546 Autotransporter beta-domain RB7713 a84aeec0eb6f6a6c0a8c834832959671 233 Gene3D G3DSA:3.40.50.1110 31 222 5.0E-20 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7713 a84aeec0eb6f6a6c0a8c834832959671 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 36 209 1.1E-8 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7713 a84aeec0eb6f6a6c0a8c834832959671 233 SUPERFAMILY SSF52266 31 222 1.11E-25 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB12538 ba407c6a102469ed1af475529ef6425f 801 SUPERFAMILY SSF82171 443 571 7.26E-8 T 11-11-2016 RB12538 ba407c6a102469ed1af475529ef6425f 801 Gene3D G3DSA:2.130.10.10 439 541 8.7E-5 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB12538 ba407c6a102469ed1af475529ef6425f 801 Pfam PF03983 SLA1 homology domain 1, SHD1 87 128 6.2E-7 T 11-11-2016 IPR007131 SLA1 homology domain 1, SHD1 GO:0008092|GO:0030674|GO:0042802|GO:0043130 RB1743 7033ed688de08c125e4ca5a672fef829 341 Pfam PF13280 WYL domain 156 336 6.2E-38 T 11-11-2016 IPR026881 WYL domain RB12669 022c201acdd7f28dd9692a6d5b786d91 473 Pfam PF03916 Polysulphide reductase, NrfD 78 404 8.8E-25 T 11-11-2016 IPR005614 NrfD family RB11165 177f768943d879bdec3faf76f6e5ab9c 521 Pfam PF02335 Cytochrome c552 56 516 2.6E-117 T 11-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB11165 177f768943d879bdec3faf76f6e5ab9c 521 Gene3D G3DSA:1.20.140.10 393 513 2.5E-41 T 11-11-2016 RB11165 177f768943d879bdec3faf76f6e5ab9c 521 SUPERFAMILY SSF48695 50 162 9.4E-124 T 11-11-2016 IPR011031 Multihaem cytochrome RB11165 177f768943d879bdec3faf76f6e5ab9c 521 SUPERFAMILY SSF48695 197 502 9.4E-124 T 11-11-2016 IPR011031 Multihaem cytochrome RB11165 177f768943d879bdec3faf76f6e5ab9c 521 PIRSF PIRSF000243 1 521 1.1E-192 T 11-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB11165 177f768943d879bdec3faf76f6e5ab9c 521 Gene3D G3DSA:1.10.710.10 219 392 1.4E-15 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB11165 177f768943d879bdec3faf76f6e5ab9c 521 Gene3D G3DSA:1.10.710.10 128 166 1.4E-15 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB9654 a8490573efad6f6962505c928c8df91e 699 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 388 691 1.1E-119 T 11-11-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RB9654 a8490573efad6f6962505c928c8df91e 699 Gene3D G3DSA:3.40.50.300 9 187 7.2E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9654 a8490573efad6f6962505c928c8df91e 699 SUPERFAMILY SSF75138 211 328 5.89E-19 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RB9654 a8490573efad6f6962505c928c8df91e 699 Gene3D G3DSA:3.40.1390.20 205 348 1.0E-26 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RB9654 a8490573efad6f6962505c928c8df91e 699 Pfam PF07085 DRTGG domain 215 327 8.7E-23 T 11-11-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RB9654 a8490573efad6f6962505c928c8df91e 699 PIRSF PIRSF006107 2 699 4.5E-178 T 11-11-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RB9654 a8490573efad6f6962505c928c8df91e 699 Pfam PF13500 AAA domain 4 192 4.1E-19 T 11-11-2016 RB9654 a8490573efad6f6962505c928c8df91e 699 SUPERFAMILY SSF52540 7 184 5.31E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9654 a8490573efad6f6962505c928c8df91e 699 Gene3D G3DSA:3.40.50.10750 509 667 1.0E-66 T 11-11-2016 RB9654 a8490573efad6f6962505c928c8df91e 699 SUPERFAMILY SSF53659 371 695 8.22E-96 T 11-11-2016 RB9654 a8490573efad6f6962505c928c8df91e 699 Pfam PF01515 Phosphate acetyl/butaryl transferase 373 691 4.0E-123 T 11-11-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RB3239 afb11346fdf12d8671a064721b9c751e 272 Pfam PF07582 AP endonuclease family 2 C terminus 228 270 1.9E-4 T 11-11-2016 IPR011418 AP endonuclease, family 2, C-terminal RB3239 afb11346fdf12d8671a064721b9c751e 272 Gene3D G3DSA:3.20.20.150 7 271 1.3E-59 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB3239 afb11346fdf12d8671a064721b9c751e 272 SUPERFAMILY SSF51658 4 268 2.62E-55 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB3239 afb11346fdf12d8671a064721b9c751e 272 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 9.0E-30 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB2710 5a0d496548274127a87ec0c478577f19 340 Gene3D G3DSA:1.20.1540.10 125 160 1.2E-30 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB2710 5a0d496548274127a87ec0c478577f19 340 Gene3D G3DSA:1.20.1540.10 193 335 1.2E-30 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB2710 5a0d496548274127a87ec0c478577f19 340 Pfam PF01694 Rhomboid family 195 336 7.2E-29 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB2710 5a0d496548274127a87ec0c478577f19 340 SUPERFAMILY SSF144091 193 335 1.19E-36 T 11-11-2016 RB2710 5a0d496548274127a87ec0c478577f19 340 SUPERFAMILY SSF144091 125 157 1.19E-36 T 11-11-2016 RB2710 5a0d496548274127a87ec0c478577f19 340 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 12 77 8.4E-12 T 11-11-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 RB1517 5880221938883770eb7e8d8a38190019 229 Pfam PF00005 ABC transporter 21 169 1.5E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB1517 5880221938883770eb7e8d8a38190019 229 SUPERFAMILY SSF52540 2 222 2.47E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1517 5880221938883770eb7e8d8a38190019 229 Gene3D G3DSA:3.40.50.300 2 223 1.4E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1517 5880221938883770eb7e8d8a38190019 229 SMART SM00382 30 224 4.8E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9350 34518d8ece64ab05c6227ec69b9a7762 733 Gene3D G3DSA:1.10.10.10 645 718 1.0E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9350 34518d8ece64ab05c6227ec69b9a7762 733 SUPERFAMILY SSF46785 635 713 2.57E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9350 34518d8ece64ab05c6227ec69b9a7762 733 Gene3D G3DSA:3.40.50.300 71 129 1.4E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9350 34518d8ece64ab05c6227ec69b9a7762 733 Gene3D G3DSA:3.40.50.300 276 315 1.4E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9696 05b5648cab97e2afe91ec47295590c02 633 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 633 3.2E-202 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like RB9696 05b5648cab97e2afe91ec47295590c02 633 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 631 2.0E-213 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like RB9696 05b5648cab97e2afe91ec47295590c02 633 PIRSF PIRSF028304 1 633 1.3E-168 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 Gene3D G3DSA:3.40.50.300 13 245 3.0E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 SUPERFAMILY SSF52540 278 491 7.02E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 Pfam PF00005 ABC transporter 30 179 2.3E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 Pfam PF00005 ABC transporter 282 430 2.1E-18 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 SUPERFAMILY SSF52540 15 240 1.41E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 SMART SM00382 39 227 7.8E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 SMART SM00382 288 479 6.8E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9385 3597235cf3a317a9b2d2d585ce428c5b 507 Gene3D G3DSA:3.40.50.300 278 495 4.7E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6686 d54b682f77e60b5970b0225b77b3e517 268 SMART SM00862 178 254 2.1E-23 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RB6686 d54b682f77e60b5970b0225b77b3e517 268 SMART SM00448 21 134 9.0E-37 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB6686 d54b682f77e60b5970b0225b77b3e517 268 Pfam PF00072 Response regulator receiver domain 23 134 5.7E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB6686 d54b682f77e60b5970b0225b77b3e517 268 Pfam PF00486 Transcriptional regulatory protein, C terminal 178 254 1.3E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RB6686 d54b682f77e60b5970b0225b77b3e517 268 Gene3D G3DSA:1.10.10.10 158 255 1.5E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6686 d54b682f77e60b5970b0225b77b3e517 268 Gene3D G3DSA:3.40.50.2300 13 140 1.4E-36 T 11-11-2016 RB6686 d54b682f77e60b5970b0225b77b3e517 268 SUPERFAMILY SSF46894 158 255 5.1E-26 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB6686 d54b682f77e60b5970b0225b77b3e517 268 SUPERFAMILY SSF52172 15 141 2.56E-36 T 11-11-2016 IPR011006 CheY-like superfamily RB13264 2942bdaea93d2ec19578477b0e0682d7 671 Pfam PF13193 AMP-binding enzyme C-terminal domain 559 636 5.4E-27 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain RB13264 2942bdaea93d2ec19578477b0e0682d7 671 Gene3D G3DSA:2.30.38.10 467 544 4.3E-11 T 11-11-2016 RB13264 2942bdaea93d2ec19578477b0e0682d7 671 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 28 671 52.132 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 RB13264 2942bdaea93d2ec19578477b0e0682d7 671 SUPERFAMILY SSF56801 39 658 1.03E-174 T 11-11-2016 RB13264 2942bdaea93d2ec19578477b0e0682d7 671 Gene3D G3DSA:3.40.50.980 295 452 1.5E-26 T 11-11-2016 RB13264 2942bdaea93d2ec19578477b0e0682d7 671 Gene3D G3DSA:3.40.50.980 109 294 8.9E-39 T 11-11-2016 RB13264 2942bdaea93d2ec19578477b0e0682d7 671 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 46 669 2.1E-303 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 RB13264 2942bdaea93d2ec19578477b0e0682d7 671 Pfam PF00501 AMP-binding enzyme 109 550 2.4E-94 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RB13264 2942bdaea93d2ec19578477b0e0682d7 671 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 51 104 5.7E-17 T 11-11-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RB13264 2942bdaea93d2ec19578477b0e0682d7 671 ProSitePatterns PS00455 Putative AMP-binding domain signature. 289 300 - T 11-11-2016 IPR020845 AMP-binding, conserved site RB13264 2942bdaea93d2ec19578477b0e0682d7 671 Gene3D G3DSA:3.30.300.30 547 648 6.5E-27 T 11-11-2016 RB8840 9c25dedeb4cf99601544b7f40f74d236 94 ProSitePatterns PS00151 Acylphosphatase signature 2. 37 53 - T 11-11-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RB8840 9c25dedeb4cf99601544b7f40f74d236 94 Gene3D G3DSA:3.30.70.100 5 94 2.7E-18 T 11-11-2016 RB8840 9c25dedeb4cf99601544b7f40f74d236 94 Pfam PF00708 Acylphosphatase 6 93 1.3E-18 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RB8840 9c25dedeb4cf99601544b7f40f74d236 94 SUPERFAMILY SSF54975 4 93 7.41E-18 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Gene3D G3DSA:3.90.800.10 97 221 1.5E-34 T 11-11-2016 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Gene3D G3DSA:1.10.1160.10 278 289 4.0E-25 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Gene3D G3DSA:1.10.1160.10 323 390 4.0E-25 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 32 541 31.049 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Gene3D G3DSA:1.10.10.350 441 541 2.7E-26 T 11-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 32 290 8.1E-78 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 323 381 4.6E-7 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 PRINTS PR00987 Glutamyl-tRNA synthetase signature 64 77 3.4E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 PRINTS PR00987 Glutamyl-tRNA synthetase signature 221 231 3.4E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 PRINTS PR00987 Glutamyl-tRNA synthetase signature 49 60 3.4E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 PRINTS PR00987 Glutamyl-tRNA synthetase signature 237 245 3.4E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 47 3.4E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 38 49 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Gene3D G3DSA:3.40.50.620 32 96 1.9E-47 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB7600 2ce6afbed10f29ee9031504376a58c8c 545 Gene3D G3DSA:3.40.50.620 223 272 1.9E-47 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB7600 2ce6afbed10f29ee9031504376a58c8c 545 SUPERFAMILY SSF48163 376 541 2.88E-30 T 11-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 SUPERFAMILY SSF52374 32 285 3.49E-103 T 11-11-2016 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 SUPERFAMILY SSF52374 319 374 3.49E-103 T 11-11-2016 RB7600 2ce6afbed10f29ee9031504376a58c8c 545 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 32 285 2.1E-93 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RB5681 02ffb27aee927da007b468ee68e5bba2 587 TIGRFAM TIGR00115 tig: trigger factor 118 526 1.3E-94 T 11-11-2016 IPR005215 Trigger factor GO:0015031 RB5681 02ffb27aee927da007b468ee68e5bba2 587 Hamap MF_00303 Trigger factor [tig]. 106 533 15.509 T 11-11-2016 IPR005215 Trigger factor GO:0015031 RB5681 02ffb27aee927da007b468ee68e5bba2 587 Pfam PF05697 Bacterial trigger factor protein (TF) 108 250 1.7E-29 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RB5681 02ffb27aee927da007b468ee68e5bba2 587 SUPERFAMILY SSF102735 106 236 2.75E-26 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RB5681 02ffb27aee927da007b468ee68e5bba2 587 SUPERFAMILY SSF109998 358 540 3.27E-35 T 11-11-2016 IPR027304 Trigger factor/SurA domain RB5681 02ffb27aee927da007b468ee68e5bba2 587 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 373 527 6.9E-25 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RB5681 02ffb27aee927da007b468ee68e5bba2 587 Gene3D G3DSA:3.30.70.1050 107 223 3.0E-23 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RB5681 02ffb27aee927da007b468ee68e5bba2 587 SUPERFAMILY SSF54534 239 357 5.79E-8 T 11-11-2016 RB5681 02ffb27aee927da007b468ee68e5bba2 587 Gene3D G3DSA:1.10.3120.10 316 501 2.1E-34 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RB10536 afef80aa8827c97c2eaaa13015e647f1 235 SUPERFAMILY SSF160537 2 56 5.49E-23 T 11-11-2016 IPR007170 Stage V sporulation protein G GO:0030435 RB10536 afef80aa8827c97c2eaaa13015e647f1 235 SUPERFAMILY SSF160537 89 121 5.49E-23 T 11-11-2016 IPR007170 Stage V sporulation protein G GO:0030435 RB10536 afef80aa8827c97c2eaaa13015e647f1 235 Pfam PF04026 SpoVG 2 114 2.6E-32 T 11-11-2016 IPR007170 Stage V sporulation protein G GO:0030435 RB10536 afef80aa8827c97c2eaaa13015e647f1 235 Gene3D G3DSA:3.30.1120.40 2 53 2.2E-35 T 11-11-2016 IPR007170 Stage V sporulation protein G GO:0030435 RB10536 afef80aa8827c97c2eaaa13015e647f1 235 Gene3D G3DSA:3.30.1120.40 86 116 2.2E-35 T 11-11-2016 IPR007170 Stage V sporulation protein G GO:0030435 RB7211 f75cfb73509715ea6a54b6213b7cf2b1 282 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 36 282 1.6E-117 T 11-11-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RB7211 f75cfb73509715ea6a54b6213b7cf2b1 282 Pfam PF00005 ABC transporter 52 206 6.4E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB7211 f75cfb73509715ea6a54b6213b7cf2b1 282 ProSitePatterns PS00211 ABC transporters family signature. 179 193 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7211 f75cfb73509715ea6a54b6213b7cf2b1 282 Gene3D G3DSA:3.40.50.300 29 273 5.7E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7211 f75cfb73509715ea6a54b6213b7cf2b1 282 SMART SM00382 60 261 3.4E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7211 f75cfb73509715ea6a54b6213b7cf2b1 282 SUPERFAMILY SSF52540 35 269 6.41E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11131 90055abb807b02d3127066d3513e4cc8 779 Gene3D G3DSA:1.10.1330.10 112 160 1.8E-4 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB11131 90055abb807b02d3127066d3513e4cc8 779 PRINTS PR00457 Animal haem peroxidase signature 416 442 1.3E-32 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 PRINTS PR00457 Animal haem peroxidase signature 259 274 1.3E-32 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 PRINTS PR00457 Animal haem peroxidase signature 466 476 1.3E-32 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 PRINTS PR00457 Animal haem peroxidase signature 214 225 1.3E-32 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 PRINTS PR00457 Animal haem peroxidase signature 391 411 1.3E-32 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 PRINTS PR00457 Animal haem peroxidase signature 655 669 1.3E-32 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 PRINTS PR00457 Animal haem peroxidase signature 373 391 1.3E-32 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 PRINTS PR00457 Animal haem peroxidase signature 586 606 1.3E-32 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 SUPERFAMILY SSF117074 707 753 5.23E-5 T 11-11-2016 RB11131 90055abb807b02d3127066d3513e4cc8 779 Pfam PF03098 Animal haem peroxidase 191 678 2.2E-154 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 SUPERFAMILY SSF63446 108 165 2.75E-10 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB11131 90055abb807b02d3127066d3513e4cc8 779 SUPERFAMILY SSF48113 187 680 6.12E-151 T 11-11-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB11131 90055abb807b02d3127066d3513e4cc8 779 Gene3D G3DSA:2.60.40.10 709 757 4.8E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB11131 90055abb807b02d3127066d3513e4cc8 779 Pfam PF00404 Dockerin type I repeat 112 131 2.4E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB11131 90055abb807b02d3127066d3513e4cc8 779 Pfam PF00404 Dockerin type I repeat 144 163 2.9E-6 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB11131 90055abb807b02d3127066d3513e4cc8 779 Gene3D G3DSA:1.10.640.10 318 678 1.6E-137 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11131 90055abb807b02d3127066d3513e4cc8 779 Gene3D G3DSA:1.10.640.10 183 274 1.6E-137 T 11-11-2016 IPR019791 Haem peroxidase, animal RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 Gene3D G3DSA:2.160.20.20 542 692 7.4E-4 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 57 538 3.2E-123 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 SUPERFAMILY SSF69255 396 484 2.59E-32 T 11-11-2016 RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 SUPERFAMILY SSF69349 474 655 8.63E-27 T 11-11-2016 RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 Gene3D G3DSA:2.40.50.230 402 484 3.6E-37 T 11-11-2016 IPR006531 Gp5 N-terminal RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 SUPERFAMILY SSF69279 223 395 3.23E-32 T 11-11-2016 RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 Pfam PF05954 Phage late control gene D protein (GPD) 62 358 1.2E-80 T 11-11-2016 RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 SUPERFAMILY SSF69279 45 219 1.91E-53 T 11-11-2016 RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 44 555 2.8E-184 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RB9699 01bcfdad6708a714b6dfd1fbe7f0bc1b 697 Gene3D G3DSA:3.55.50.10 131 224 4.5E-32 T 11-11-2016 RB7020 bf9946c06f8dea1035e7089f935a243c 510 SUPERFAMILY SSF53790 9 266 2.09E-68 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RB7020 bf9946c06f8dea1035e7089f935a243c 510 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 13 249 5.2E-77 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RB7020 bf9946c06f8dea1035e7089f935a243c 510 Gene3D G3DSA:3.40.50.10090 396 507 3.8E-20 T 11-11-2016 RB7020 bf9946c06f8dea1035e7089f935a243c 510 Gene3D G3DSA:3.30.950.10 128 268 3.6E-47 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RB7020 bf9946c06f8dea1035e7089f935a243c 510 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 225 2.7E-44 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RB7020 bf9946c06f8dea1035e7089f935a243c 510 Gene3D G3DSA:3.40.50.10090 269 385 1.7E-33 T 11-11-2016 RB7020 bf9946c06f8dea1035e7089f935a243c 510 Pfam PF02602 Uroporphyrinogen-III synthase HemD 277 502 4.6E-59 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB7020 bf9946c06f8dea1035e7089f935a243c 510 Gene3D G3DSA:3.40.1010.10 12 127 5.2E-39 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RB7020 bf9946c06f8dea1035e7089f935a243c 510 SUPERFAMILY SSF69618 263 506 2.75E-66 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB7020 bf9946c06f8dea1035e7089f935a243c 510 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 18 32 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RB7193 d507a444b8840c26fc04dd3ba2951bde 373 Gene3D G3DSA:3.40.50.720 3 157 2.0E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7193 d507a444b8840c26fc04dd3ba2951bde 373 SUPERFAMILY SSF51735 4 175 1.15E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7193 d507a444b8840c26fc04dd3ba2951bde 373 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 139 1.2E-19 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB7193 d507a444b8840c26fc04dd3ba2951bde 373 SUPERFAMILY SSF55347 161 338 5.07E-29 T 11-11-2016 RB7193 d507a444b8840c26fc04dd3ba2951bde 373 Gene3D G3DSA:3.30.360.10 162 277 4.7E-22 T 11-11-2016 RB7193 d507a444b8840c26fc04dd3ba2951bde 373 Gene3D G3DSA:3.30.360.10 325 373 4.7E-22 T 11-11-2016 RB2244 affe4bbe3516b13111987564639524e4 192 ProSitePatterns PS00460 Glutathione peroxidases active site. 53 68 - T 11-11-2016 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 RB2244 affe4bbe3516b13111987564639524e4 192 PRINTS PR01011 Glutathione peroxidase family signature 86 102 1.0E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RB2244 affe4bbe3516b13111987564639524e4 192 PRINTS PR01011 Glutathione peroxidase family signature 51 68 1.0E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RB2244 affe4bbe3516b13111987564639524e4 192 PRINTS PR01011 Glutathione peroxidase family signature 152 161 1.0E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RB2244 affe4bbe3516b13111987564639524e4 192 SUPERFAMILY SSF52833 35 190 2.12E-55 T 11-11-2016 IPR012336 Thioredoxin-like fold RB2244 affe4bbe3516b13111987564639524e4 192 Gene3D G3DSA:3.40.30.10 35 191 3.2E-65 T 11-11-2016 IPR012336 Thioredoxin-like fold RB2244 affe4bbe3516b13111987564639524e4 192 Pfam PF00255 Glutathione peroxidase 35 139 7.6E-42 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RB2244 affe4bbe3516b13111987564639524e4 192 PIRSF PIRSF000303 10 192 1.0E-65 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RB2244 affe4bbe3516b13111987564639524e4 192 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 89 96 - T 11-11-2016 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 RB6221 3588dbf5dcd7168c8e1eee4cf8b41bd5 1005 Pfam PF17148 Domain of unknown function (DUF5117) 100 269 1.9E-18 T 11-11-2016 IPR033413 Domain of unknown function DUF5117 RB6221 3588dbf5dcd7168c8e1eee4cf8b41bd5 1005 Gene3D G3DSA:3.40.390.10 575 656 2.0E-14 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB6221 3588dbf5dcd7168c8e1eee4cf8b41bd5 1005 Gene3D G3DSA:3.40.390.10 212 387 2.0E-14 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB6221 3588dbf5dcd7168c8e1eee4cf8b41bd5 1005 SUPERFAMILY SSF55486 569 655 3.84E-24 T 11-11-2016 RB6221 3588dbf5dcd7168c8e1eee4cf8b41bd5 1005 SUPERFAMILY SSF55486 233 378 3.84E-24 T 11-11-2016 RB6221 3588dbf5dcd7168c8e1eee4cf8b41bd5 1005 Pfam PF16313 Met-zincin 566 883 3.8E-83 T 11-11-2016 IPR032534 Domian of unknown function DUF4953 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 PIRSF PIRSF000171 13 552 6.7E-42 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 Gene3D G3DSA:3.90.700.10 243 347 1.6E-38 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 Gene3D G3DSA:3.50.50.60 17 242 8.5E-96 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 Gene3D G3DSA:3.50.50.60 348 410 8.5E-96 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 1.8E-6 T 11-11-2016 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 1.8E-6 T 11-11-2016 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 SUPERFAMILY SSF51905 355 414 1.96E-63 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 SUPERFAMILY SSF51905 16 263 1.96E-63 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 Gene3D G3DSA:1.20.58.100 429 531 4.4E-27 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 Pfam PF00890 FAD binding domain 21 391 2.6E-99 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 533 2.1E-17 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 SUPERFAMILY SSF56425 237 352 2.99E-40 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 SUPERFAMILY SSF46977 430 544 1.27E-32 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB3824 9ef95e04d10e7b977831a8caa89f4cc6 560 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 20 515 6.8E-166 T 11-11-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 RB2568 28bb8df2eca19a628d1d55b40b6acb15 287 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 184 1.7E-42 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB2568 28bb8df2eca19a628d1d55b40b6acb15 287 Gene3D G3DSA:3.40.225.10 5 207 2.6E-60 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB2568 28bb8df2eca19a628d1d55b40b6acb15 287 SMART SM01007 9 185 4.3E-55 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB2568 28bb8df2eca19a628d1d55b40b6acb15 287 SUPERFAMILY SSF53639 4 213 7.46E-61 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB12191 f8f032e7f8d794fcc3644650a42ab725 457 SUPERFAMILY SSF52402 152 308 9.27E-12 T 11-11-2016 RB12191 f8f032e7f8d794fcc3644650a42ab725 457 Gene3D G3DSA:3.40.50.620 134 308 3.6E-16 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB12191 f8f032e7f8d794fcc3644650a42ab725 457 Pfam PF00733 Asparagine synthase 169 309 2.7E-12 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 Gene3D G3DSA:2.40.10.10 320 432 4.3E-45 T 11-11-2016 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 Gene3D G3DSA:2.30.42.10 433 529 2.5E-28 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 Gene3D G3DSA:2.30.42.10 538 628 3.6E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 SUPERFAMILY SSF50156 538 628 1.18E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 Pfam PF13365 Trypsin-like peptidase domain 255 392 8.6E-35 T 11-11-2016 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 194 626 2.9E-137 T 11-11-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 SUPERFAMILY SSF50156 389 514 7.79E-24 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 Gene3D G3DSA:2.40.10.10 188 319 1.2E-36 T 11-11-2016 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 SUPERFAMILY SSF50494 192 427 2.02E-66 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 SMART SM00228 537 621 2.5E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 SMART SM00228 431 513 2.7E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 Pfam PF13180 PDZ domain 538 623 1.4E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 Pfam PF13180 PDZ domain 431 522 5.3E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 PRINTS PR00834 HtrA/DegQ protease family signature 285 305 4.3E-54 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 PRINTS PR00834 HtrA/DegQ protease family signature 385 402 4.3E-54 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 PRINTS PR00834 HtrA/DegQ protease family signature 363 380 4.3E-54 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 PRINTS PR00834 HtrA/DegQ protease family signature 325 349 4.3E-54 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 PRINTS PR00834 HtrA/DegQ protease family signature 471 483 4.3E-54 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB1359 5bbf594e9b4cb3addeaaf659a34e52c3 629 PRINTS PR00834 HtrA/DegQ protease family signature 264 276 4.3E-54 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB6315 4fc50275fc8c4ad2129be12cddc41563 257 Gene3D G3DSA:3.40.50.2300 27 159 1.2E-8 T 11-11-2016 RB6315 4fc50275fc8c4ad2129be12cddc41563 257 SUPERFAMILY SSF52172 33 163 1.87E-7 T 11-11-2016 IPR011006 CheY-like superfamily RB6315 4fc50275fc8c4ad2129be12cddc41563 257 SUPERFAMILY SSF46894 148 219 2.28E-10 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB6315 4fc50275fc8c4ad2129be12cddc41563 257 Gene3D G3DSA:1.10.10.10 160 218 3.9E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6315 4fc50275fc8c4ad2129be12cddc41563 257 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 3.0E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB6315 4fc50275fc8c4ad2129be12cddc41563 257 SMART SM00421 156 213 5.1E-7 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 PIRSF PIRSF000094 25 289 4.7E-87 T 11-11-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 SUPERFAMILY SSF51735 29 285 1.69E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 37 282 3.1E-71 T 11-11-2016 RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 209 3.6E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 180 3.6E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 126 3.6E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 245 265 3.6E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 3.6E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10790 91c420de7ba7ea5017cb7ad0246c81aa 299 Gene3D G3DSA:3.40.50.720 26 284 7.5E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SUPERFAMILY SSF63446 73 132 1.41E-6 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SUPERFAMILY SSF141072 584 661 4.71E-15 T 11-11-2016 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Gene3D G3DSA:3.90.182.10 251 390 3.2E-29 T 11-11-2016 IPR011658 PA14 domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Gene3D G3DSA:3.90.182.10 451 574 2.4E-9 T 11-11-2016 IPR011658 PA14 domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Gene3D G3DSA:2.60.120.260 721 839 4.6E-6 T 11-11-2016 IPR008979 Galactose-binding domain-like RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Gene3D G3DSA:1.10.1330.10 73 129 1.1E-4 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SMART SM00758 396 556 3.5E-30 T 11-11-2016 IPR011658 PA14 domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SMART SM00758 249 385 8.2E-5 T 11-11-2016 IPR011658 PA14 domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Pfam PF00404 Dockerin type I repeat 111 131 1.2E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Pfam PF00404 Dockerin type I repeat 73 92 1.6E-4 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SUPERFAMILY SSF56988 452 584 3.4E-6 T 11-11-2016 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Pfam PF07691 PA14 domain 397 554 1.3E-26 T 11-11-2016 IPR011658 PA14 domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Pfam PF07691 PA14 domain 250 364 8.6E-13 T 11-11-2016 IPR011658 PA14 domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SUPERFAMILY SSF49785 721 842 3.74E-23 T 11-11-2016 IPR008979 Galactose-binding domain-like RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Gene3D G3DSA:2.60.120.200 1311 1448 1.3E-10 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Pfam PF03160 Calx-beta domain 583 655 2.2E-7 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SUPERFAMILY SSF51445 894 1231 1.72E-49 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Pfam PF07595 Planctomycete extracellular 39 60 1.1E-5 T 11-11-2016 IPR011506 Planctomycete extracellular RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Pfam PF00331 Glycosyl hydrolase family 10 930 1229 2.3E-23 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1326 1448 2.1E-10 T 11-11-2016 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SUPERFAMILY SSF49899 1316 1448 5.81E-11 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 Gene3D G3DSA:3.20.20.80 908 1236 4.3E-46 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB10416 b1d9521154d09d7690a0cd67bc742be7 1564 SUPERFAMILY SSF56988 250 388 7.19E-25 T 11-11-2016 RB9275 667dec60414a04147db8f0b9899867d6 141 Gene3D G3DSA:2.30.330.10 61 139 2.0E-30 T 11-11-2016 RB9275 667dec60414a04147db8f0b9899867d6 141 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 65 138 1.1E-31 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 RB9275 667dec60414a04147db8f0b9899867d6 141 SUPERFAMILY SSF101801 64 139 3.27E-23 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) RB9275 667dec60414a04147db8f0b9899867d6 141 PRINTS PR00956 Flagellar motor switch protein FliN signature 67 83 1.4E-24 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 RB9275 667dec60414a04147db8f0b9899867d6 141 PRINTS PR00956 Flagellar motor switch protein FliN signature 100 113 1.4E-24 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 RB9275 667dec60414a04147db8f0b9899867d6 141 PRINTS PR00956 Flagellar motor switch protein FliN signature 84 100 1.4E-24 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 RB9275 667dec60414a04147db8f0b9899867d6 141 PRINTS PR00956 Flagellar motor switch protein FliN signature 113 128 1.4E-24 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 RB9275 667dec60414a04147db8f0b9899867d6 141 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 67 137 1.8E-25 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) RB5399 1ea7245e8a452b17d82d66060c46ba6e 336 SUPERFAMILY SSF54523 29 148 4.08E-23 T 11-11-2016 RB5399 1ea7245e8a452b17d82d66060c46ba6e 336 Gene3D G3DSA:3.30.700.10 29 74 4.1E-6 T 11-11-2016 RB5399 1ea7245e8a452b17d82d66060c46ba6e 336 Pfam PF13633 Prokaryotic N-terminal methylation site 27 52 1.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5399 1ea7245e8a452b17d82d66060c46ba6e 336 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 27 48 2.2E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5399 1ea7245e8a452b17d82d66060c46ba6e 336 Pfam PF07596 Protein of unknown function (DUF1559) 53 316 6.6E-75 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 SUPERFAMILY SSF82866 852 1079 4.45E-46 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Gene3D G3DSA:3.30.70.1430 606 717 2.5E-7 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Gene3D G3DSA:3.30.70.1430 44 134 1.2E-17 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 SUPERFAMILY SSF82693 184 213 3.4E-8 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 SUPERFAMILY SSF82693 300 356 3.4E-8 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 SUPERFAMILY SSF82866 324 518 3.14E-40 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Gene3D G3DSA:3.30.2090.10 777 853 8.7E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB5490 270e1b574a9a6357ef8172febefbaae0 1092 PRINTS PR00702 Acriflavin resistance protein family signature 416 440 5.8E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.8E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 PRINTS PR00702 Acriflavin resistance protein family signature 362 385 5.8E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 PRINTS PR00702 Acriflavin resistance protein family signature 675 689 5.8E-19 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 SUPERFAMILY SSF82693 605 716 4.71E-7 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 SUPERFAMILY SSF82714 214 297 9.29E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Pfam PF00873 AcrB/AcrD/AcrF family 11 1077 2.6E-156 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Gene3D G3DSA:1.20.1640.10 335 518 2.2E-45 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Gene3D G3DSA:3.30.2090.10 213 298 6.1E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB5490 270e1b574a9a6357ef8172febefbaae0 1092 SUPERFAMILY SSF82693 42 131 1.73E-15 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Gene3D G3DSA:3.30.70.1320 187 210 8.2E-6 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Gene3D G3DSA:3.30.70.1320 302 334 8.2E-6 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 Gene3D G3DSA:1.10.3850.10 860 1078 4.3E-57 T 11-11-2016 RB5490 270e1b574a9a6357ef8172febefbaae0 1092 SUPERFAMILY SSF82714 777 853 3.4E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB7095 a5a977a6ba8eab6007685305a377ebf8 254 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 251 42.111 T 11-11-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB7095 a5a977a6ba8eab6007685305a377ebf8 254 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 11-11-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB7095 a5a977a6ba8eab6007685305a377ebf8 254 Pfam PF00121 Triosephosphate isomerase 6 248 6.6E-95 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB7095 a5a977a6ba8eab6007685305a377ebf8 254 Gene3D G3DSA:3.20.20.70 3 251 2.3E-105 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB7095 a5a977a6ba8eab6007685305a377ebf8 254 SUPERFAMILY SSF51351 3 250 4.19E-93 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB7095 a5a977a6ba8eab6007685305a377ebf8 254 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 242 2.4E-64 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB12381 375e1d5b772c156da1400595d8ed3080 428 PIRSF PIRSF001400 1 425 2.1E-194 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 ProSitePatterns PS00164 Enolase signature. 334 347 - T 11-11-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB12381 375e1d5b772c156da1400595d8ed3080 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 4.3E-130 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 Gene3D G3DSA:3.20.20.120 129 420 1.1E-131 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB12381 375e1d5b772c156da1400595d8ed3080 428 Gene3D G3DSA:3.30.390.10 4 126 4.6E-57 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 SUPERFAMILY SSF54826 3 136 1.26E-57 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 Hamap MF_00318 Enolase [eno]. 2 411 44.6 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 SMART SM01193 4 134 4.6E-97 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 SUPERFAMILY SSF51604 139 419 1.1E-126 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB12381 375e1d5b772c156da1400595d8ed3080 428 SMART SM01192 139 425 5.3E-218 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 419 1.6E-207 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 Pfam PF03952 Enolase, N-terminal domain 4 134 4.2E-60 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 PRINTS PR00148 Enolase signature 363 380 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 PRINTS PR00148 Enolase signature 334 348 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 PRINTS PR00148 Enolase signature 37 51 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 PRINTS PR00148 Enolase signature 311 322 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 PRINTS PR00148 Enolase signature 107 123 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB12381 375e1d5b772c156da1400595d8ed3080 428 PRINTS PR00148 Enolase signature 161 174 1.9E-44 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB3145 471050bda8a3cf696c05980807790f74 382 Pfam PF04986 Putative transposase 141 309 1.3E-44 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB3145 471050bda8a3cf696c05980807790f74 382 Pfam PF14319 Transposase zinc-binding domain 8 111 2.0E-32 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB2559 471050bda8a3cf696c05980807790f74 382 Pfam PF04986 Putative transposase 141 309 1.3E-44 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB2559 471050bda8a3cf696c05980807790f74 382 Pfam PF14319 Transposase zinc-binding domain 8 111 2.0E-32 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB10240 d1f618ed92e2e88b7e59e21939f0acfd 505 SUPERFAMILY SSF54523 33 170 3.77E-9 T 11-11-2016 RB10240 d1f618ed92e2e88b7e59e21939f0acfd 505 Pfam PF07596 Protein of unknown function (DUF1559) 59 370 4.5E-46 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB4514 3fcd6273b59322998b62c1dbbdbc0b0e 238 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 212 1.6E-15 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4514 3fcd6273b59322998b62c1dbbdbc0b0e 238 Gene3D G3DSA:1.10.1740.10 22 120 3.1E-24 T 11-11-2016 RB4514 3fcd6273b59322998b62c1dbbdbc0b0e 238 SUPERFAMILY SSF88946 22 119 4.24E-24 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4514 3fcd6273b59322998b62c1dbbdbc0b0e 238 Pfam PF04542 Sigma-70 region 2 46 111 3.1E-13 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5671 0e51c91b5ef58f76e06aa2b237ca6aad 703 SUPERFAMILY SSF56317 17 304 3.53E-41 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5671 0e51c91b5ef58f76e06aa2b237ca6aad 703 Gene3D G3DSA:3.40.50.620 361 680 1.9E-52 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB5671 0e51c91b5ef58f76e06aa2b237ca6aad 703 Pfam PF02540 NAD synthase 390 581 5.8E-17 T 11-11-2016 IPR022310 NAD/GMP synthase RB5671 0e51c91b5ef58f76e06aa2b237ca6aad 703 Pfam PF00795 Carbon-nitrogen hydrolase 20 257 3.1E-8 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5671 0e51c91b5ef58f76e06aa2b237ca6aad 703 Gene3D G3DSA:3.60.110.10 19 304 2.2E-39 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5671 0e51c91b5ef58f76e06aa2b237ca6aad 703 PIRSF PIRSF006630 16 701 3.7E-127 T 11-11-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 RB5671 0e51c91b5ef58f76e06aa2b237ca6aad 703 SUPERFAMILY SSF52402 360 682 5.76E-55 T 11-11-2016 RB9584 02b24c0a44f80634656777910f8716f2 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 5.9E-9 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB9584 02b24c0a44f80634656777910f8716f2 328 Gene3D G3DSA:3.90.180.10 1 150 1.9E-45 T 11-11-2016 IPR011032 GroES-like RB9584 02b24c0a44f80634656777910f8716f2 328 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 11-11-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RB9584 02b24c0a44f80634656777910f8716f2 328 SUPERFAMILY SSF51735 119 296 1.6E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9584 02b24c0a44f80634656777910f8716f2 328 Pfam PF13602 Zinc-binding dehydrogenase 194 326 1.1E-24 T 11-11-2016 RB9584 02b24c0a44f80634656777910f8716f2 328 SMART SM00829 10 326 3.3E-36 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB9584 02b24c0a44f80634656777910f8716f2 328 Gene3D G3DSA:3.40.50.720 151 260 3.4E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9584 02b24c0a44f80634656777910f8716f2 328 SUPERFAMILY SSF50129 1 153 8.83E-36 T 11-11-2016 IPR011032 GroES-like RB6873 8db599f9c2185504ba3eef0eeff0bd45 482 SUPERFAMILY SSF53649 55 466 8.57E-122 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6873 8db599f9c2185504ba3eef0eeff0bd45 482 ProSitePatterns PS00149 Sulfatases signature 2. 151 161 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB6873 8db599f9c2185504ba3eef0eeff0bd45 482 Gene3D G3DSA:3.40.720.10 53 373 6.3E-105 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB6873 8db599f9c2185504ba3eef0eeff0bd45 482 Gene3D G3DSA:3.30.1120.10 374 466 3.0E-19 T 11-11-2016 RB6873 8db599f9c2185504ba3eef0eeff0bd45 482 Pfam PF00884 Sulfatase 56 357 5.3E-73 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB4174 2c3a627265d2d922f7b2ce5713c6b3b2 193 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 4 47 6.3E-11 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 RB4174 2c3a627265d2d922f7b2ce5713c6b3b2 193 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 48 193 1.1E-46 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 RB4174 2c3a627265d2d922f7b2ce5713c6b3b2 193 SUPERFAMILY SSF47240 1 193 2.32E-65 T 11-11-2016 IPR009078 Ferritin-like superfamily RB4174 2c3a627265d2d922f7b2ce5713c6b3b2 193 PIRSF PIRSF020736 1 193 8.9E-75 T 11-11-2016 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 RB4174 2c3a627265d2d922f7b2ce5713c6b3b2 193 Gene3D G3DSA:1.20.1260.10 2 193 6.5E-66 T 11-11-2016 IPR012347 Ferritin-related RB4989 acb6bed5e2b06a09c47bd7c5b36bb557 438 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 98 122 2.4E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4989 acb6bed5e2b06a09c47bd7c5b36bb557 438 Gene3D G3DSA:3.30.700.10 104 162 3.3E-7 T 11-11-2016 RB4989 acb6bed5e2b06a09c47bd7c5b36bb557 438 SUPERFAMILY SSF54523 104 198 1.1E-20 T 11-11-2016 RB4989 acb6bed5e2b06a09c47bd7c5b36bb557 438 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 103 123 1.9E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4989 acb6bed5e2b06a09c47bd7c5b36bb557 438 Pfam PF07596 Protein of unknown function (DUF1559) 128 420 9.6E-74 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6818 299a51b508203ee39291224e545a2775 304 Pfam PF00512 His Kinase A (phospho-acceptor) domain 83 151 9.1E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB6818 299a51b508203ee39291224e545a2775 304 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 197 299 3.3E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB6818 299a51b508203ee39291224e545a2775 304 Gene3D G3DSA:1.10.287.130 79 149 2.6E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB6818 299a51b508203ee39291224e545a2775 304 SUPERFAMILY SSF47384 72 151 7.65E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB6818 299a51b508203ee39291224e545a2775 304 SMART SM00387 195 301 2.7E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB6818 299a51b508203ee39291224e545a2775 304 SMART SM00388 82 153 1.6E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB6818 299a51b508203ee39291224e545a2775 304 SUPERFAMILY SSF55874 143 299 5.5E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB6818 299a51b508203ee39291224e545a2775 304 Gene3D G3DSA:3.30.565.10 157 300 1.1E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB6818 299a51b508203ee39291224e545a2775 304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 261 279 4.9E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB6818 299a51b508203ee39291224e545a2775 304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 298 4.9E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB6818 299a51b508203ee39291224e545a2775 304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 232 246 4.9E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB6818 299a51b508203ee39291224e545a2775 304 PRINTS PR00344 Bacterial sensor protein C-terminal signature 250 260 4.9E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4621 12ba09a0e4865361a485533d7663bdf8 1497 Pfam PF07995 Glucose / Sorbosone dehydrogenase 635 821 2.8E-6 T 11-11-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RB4621 12ba09a0e4865361a485533d7663bdf8 1497 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1358 1491 1.0E-29 T 11-11-2016 IPR013427 Haem-binding domain, putative RB4621 12ba09a0e4865361a485533d7663bdf8 1497 Pfam PF06283 Trehalose utilisation 54 276 7.1E-20 T 11-11-2016 IPR029010 ThuA-like domain RB4621 12ba09a0e4865361a485533d7663bdf8 1497 SUPERFAMILY SSF50952 519 882 3.92E-18 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB4621 12ba09a0e4865361a485533d7663bdf8 1497 SUPERFAMILY SSF46626 1467 1494 9.58E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4621 12ba09a0e4865361a485533d7663bdf8 1497 SUPERFAMILY SSF46626 1355 1422 9.58E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4621 12ba09a0e4865361a485533d7663bdf8 1497 SUPERFAMILY SSF49785 412 497 6.38E-11 T 11-11-2016 IPR008979 Galactose-binding domain-like RB4621 12ba09a0e4865361a485533d7663bdf8 1497 SMART SM00776 407 552 3.4E-50 T 11-11-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module RB4621 12ba09a0e4865361a485533d7663bdf8 1497 SUPERFAMILY SSF48371 921 1053 4.99E-14 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB4621 12ba09a0e4865361a485533d7663bdf8 1497 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 530 902 2.3E-88 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB4621 12ba09a0e4865361a485533d7663bdf8 1497 Gene3D G3DSA:1.25.10.10 919 1037 4.8E-13 T 11-11-2016 IPR011989 Armadillo-like helical RB4621 12ba09a0e4865361a485533d7663bdf8 1497 Gene3D G3DSA:1.25.10.10 1202 1300 4.8E-13 T 11-11-2016 IPR011989 Armadillo-like helical RB4621 12ba09a0e4865361a485533d7663bdf8 1497 Gene3D G3DSA:2.120.10.30 523 911 5.3E-46 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB4621 12ba09a0e4865361a485533d7663bdf8 1497 Gene3D G3DSA:1.10.760.10 1348 1494 1.1E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4621 12ba09a0e4865361a485533d7663bdf8 1497 SUPERFAMILY SSF52317 39 282 2.38E-38 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB4621 12ba09a0e4865361a485533d7663bdf8 1497 Pfam PF08305 NPCBM/NEW2 domain 415 499 3.5E-7 T 11-11-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module RB4621 12ba09a0e4865361a485533d7663bdf8 1497 Gene3D G3DSA:3.40.50.880 37 300 6.2E-39 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB4742 befef2c6d4b14c628addc93d33a02177 324 SUPERFAMILY SSF52402 10 145 2.26E-20 T 11-11-2016 RB4742 befef2c6d4b14c628addc93d33a02177 324 Gene3D G3DSA:3.40.50.620 141 302 4.2E-33 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB4742 befef2c6d4b14c628addc93d33a02177 324 PRINTS PR01438 Universal stress protein signature 277 299 2.1E-6 T 11-11-2016 IPR006015 Universal stress protein A RB4742 befef2c6d4b14c628addc93d33a02177 324 PRINTS PR01438 Universal stress protein signature 150 168 2.1E-6 T 11-11-2016 IPR006015 Universal stress protein A RB4742 befef2c6d4b14c628addc93d33a02177 324 PRINTS PR01438 Universal stress protein signature 259 271 2.1E-6 T 11-11-2016 IPR006015 Universal stress protein A RB4742 befef2c6d4b14c628addc93d33a02177 324 Pfam PF00582 Universal stress protein family 4 143 1.8E-15 T 11-11-2016 IPR006016 UspA GO:0006950 RB4742 befef2c6d4b14c628addc93d33a02177 324 Pfam PF00582 Universal stress protein family 150 299 6.7E-19 T 11-11-2016 IPR006016 UspA GO:0006950 RB4742 befef2c6d4b14c628addc93d33a02177 324 ProSitePatterns PS00482 Dihydroorotase signature 1. 239 247 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RB4742 befef2c6d4b14c628addc93d33a02177 324 SUPERFAMILY SSF52402 150 306 1.51E-27 T 11-11-2016 RB4742 befef2c6d4b14c628addc93d33a02177 324 Gene3D G3DSA:3.40.50.620 2 140 1.8E-20 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 SUPERFAMILY SSF88659 108 169 1.53E-8 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 Pfam PF07719 Tetratricopeptide repeat 369 399 1.6E-5 T 11-11-2016 IPR013105 Tetratricopeptide repeat 2 RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 Gene3D G3DSA:1.10.10.10 109 169 3.8E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 Gene3D G3DSA:1.10.1740.10 10 81 9.4E-10 T 11-11-2016 RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 Pfam PF08281 Sigma-70, region 4 119 167 2.2E-6 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 SUPERFAMILY SSF88946 11 91 1.92E-11 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 Pfam PF04542 Sigma-70 region 2 15 82 7.3E-10 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 Gene3D G3DSA:1.25.40.10 383 399 6.0E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 SUPERFAMILY SSF48452 314 405 2.28E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB555 dd802e6f964e4d03dfd0a6a6c27e8a75 419 Gene3D G3DSA:1.25.40.10 313 382 1.5E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5477 0b489b45853ca5e064af909d2f3c4c52 209 Pfam PF00072 Response regulator receiver domain 78 187 2.8E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5477 0b489b45853ca5e064af909d2f3c4c52 209 Gene3D G3DSA:3.40.50.2300 72 200 6.0E-23 T 11-11-2016 RB5477 0b489b45853ca5e064af909d2f3c4c52 209 SUPERFAMILY SSF52172 74 200 1.28E-23 T 11-11-2016 IPR011006 CheY-like superfamily RB5477 0b489b45853ca5e064af909d2f3c4c52 209 SMART SM00448 76 189 2.1E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB6821 f5a47acc0e9a328dcbd55b3971449127 424 Pfam PF00155 Aminotransferase class I and II 59 394 1.8E-40 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RB6821 f5a47acc0e9a328dcbd55b3971449127 424 SUPERFAMILY SSF53383 43 402 2.81E-75 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB6821 f5a47acc0e9a328dcbd55b3971449127 424 Gene3D G3DSA:3.40.640.10 75 299 5.0E-50 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB6821 f5a47acc0e9a328dcbd55b3971449127 424 Gene3D G3DSA:3.90.1150.10 300 407 3.7E-12 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB1381 5524ba8fbf08db4a002b206a88f6eb01 370 Pfam PF01916 Deoxyhypusine synthase 65 366 1.0E-36 T 11-11-2016 IPR002773 Deoxyhypusine synthase GO:0008612 Reactome: R-HSA-204626 RB1381 5524ba8fbf08db4a002b206a88f6eb01 370 Gene3D G3DSA:3.40.910.10 48 368 4.4E-65 T 11-11-2016 IPR002773 Deoxyhypusine synthase GO:0008612 Reactome: R-HSA-204626 RB1381 5524ba8fbf08db4a002b206a88f6eb01 370 SUPERFAMILY SSF52467 45 369 1.05E-77 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB10940 bb9f38200a698670e5abdf6265d9e24c 183 Pfam PF13673 Acetyltransferase (GNAT) domain 100 171 1.2E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB10940 bb9f38200a698670e5abdf6265d9e24c 183 Gene3D G3DSA:3.40.630.30 49 170 1.3E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10940 bb9f38200a698670e5abdf6265d9e24c 183 SUPERFAMILY SSF55729 35 173 1.92E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10793 68fbe8fe37249425d23edb767f70d6bd 654 Gene3D G3DSA:1.10.8.60 514 582 2.7E-23 T 11-11-2016 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 SUPERFAMILY SSF55781 158 327 1.48E-24 T 11-11-2016 IPR029016 GAF domain-like RB10793 68fbe8fe37249425d23edb767f70d6bd 654 Gene3D G3DSA:3.30.450.40 170 325 1.1E-25 T 11-11-2016 IPR029016 GAF domain-like RB10793 68fbe8fe37249425d23edb767f70d6bd 654 SMART SM00065 172 324 9.1E-11 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 SUPERFAMILY SSF46689 553 650 1.31E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 Pfam PF00158 Sigma-54 interaction domain 340 506 4.5E-68 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 SUPERFAMILY SSF52540 340 581 6.31E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10793 68fbe8fe37249425d23edb767f70d6bd 654 Pfam PF01590 GAF domain 177 314 4.3E-10 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 553 562 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB10793 68fbe8fe37249425d23edb767f70d6bd 654 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 631 651 2.1E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 614 631 2.1E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 Gene3D G3DSA:1.10.10.60 609 649 3.7E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 426 441 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 Pfam PF02954 Bacterial regulatory protein, Fis family 610 648 1.7E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB10793 68fbe8fe37249425d23edb767f70d6bd 654 Gene3D G3DSA:3.40.50.300 337 511 2.4E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10793 68fbe8fe37249425d23edb767f70d6bd 654 SMART SM00382 360 503 8.9E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB12262 47d5593c2587f20e64cbf66db8f50da4 417 PRINTS PR00406 Cytochrome B5 reductase signature 376 384 3.9E-7 T 11-11-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 PRINTS PR00406 Cytochrome B5 reductase signature 257 271 3.9E-7 T 11-11-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 PRINTS PR00406 Cytochrome B5 reductase signature 281 300 3.9E-7 T 11-11-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 PRINTS PR00406 Cytochrome B5 reductase signature 206 213 3.9E-7 T 11-11-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 Pfam PF00970 Oxidoreductase FAD-binding domain 167 269 3.9E-7 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 Pfam PF00042 Globin 17 111 7.5E-12 T 11-11-2016 IPR000971 Globin GO:0019825|GO:0020037 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 Pfam PF00175 Oxidoreductase NAD-binding domain 282 390 2.9E-17 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 Gene3D G3DSA:1.10.490.10 11 151 4.0E-49 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 SUPERFAMILY SSF63380 159 269 1.33E-24 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 Hamap MF_01252 Flavohemoprotein [hmp]. 10 414 55.777 T 11-11-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 SUPERFAMILY SSF52343 277 410 3.67E-36 T 11-11-2016 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 Gene3D G3DSA:2.40.30.10 160 270 1.1E-31 T 11-11-2016 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 Gene3D G3DSA:3.40.50.80 277 412 3.6E-37 T 11-11-2016 RB12262 47d5593c2587f20e64cbf66db8f50da4 417 SUPERFAMILY SSF46458 6 143 5.82E-41 T 11-11-2016 IPR009050 Globin-like RB3703 4ed6f411a23e61019ac06adc38d2cc5e 192 Gene3D G3DSA:3.40.190.10 2 52 1.8E-14 T 11-11-2016 RB3703 4ed6f411a23e61019ac06adc38d2cc5e 192 Pfam PF03466 LysR substrate binding domain 3 169 1.7E-29 T 11-11-2016 IPR005119 LysR, substrate-binding RB3703 4ed6f411a23e61019ac06adc38d2cc5e 192 Gene3D G3DSA:3.40.190.10 53 140 3.0E-26 T 11-11-2016 RB3703 4ed6f411a23e61019ac06adc38d2cc5e 192 SUPERFAMILY SSF53850 3 171 7.24E-27 T 11-11-2016 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 Gene3D G3DSA:2.40.10.10 251 333 3.7E-12 T 11-11-2016 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 SUPERFAMILY SSF50494 245 417 3.73E-33 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 Gene3D G3DSA:2.40.10.10 334 433 1.7E-18 T 11-11-2016 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 Pfam PF01223 DNA/RNA non-specific endonuclease 605 838 8.1E-55 T 11-11-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 Pfam PF13365 Trypsin-like peptidase domain 259 412 1.9E-20 T 11-11-2016 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 SUPERFAMILY SSF54060 607 839 1.18E-42 T 11-11-2016 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 SMART SM00477 612 844 1.0E-12 T 11-11-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 Gene3D G3DSA:3.40.570.10 607 840 3.4E-37 T 11-11-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 SMART SM00892 611 844 2.4E-59 T 11-11-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 PRINTS PR00839 V8 serine protease family signature 354 367 6.3E-15 T 11-11-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 PRINTS PR00839 V8 serine protease family signature 259 276 6.3E-15 T 11-11-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 PRINTS PR00839 V8 serine protease family signature 387 403 6.3E-15 T 11-11-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 PRINTS PR00839 V8 serine protease family signature 404 416 6.3E-15 T 11-11-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 PRINTS PR01774 Exfoliative toxin signature 389 413 8.6E-9 T 11-11-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 PRINTS PR01774 Exfoliative toxin signature 346 364 8.6E-9 T 11-11-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RB4270 f31afd71c5fc01e266a0447cae1dc02c 867 PRINTS PR01774 Exfoliative toxin signature 244 265 8.6E-9 T 11-11-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RB11579 7e1255e20dde0a858162d97d833a063f 420 Gene3D G3DSA:3.40.50.300 71 249 1.4E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11579 7e1255e20dde0a858162d97d833a063f 420 ProSitePatterns PS01008 DnaA protein signature. 378 397 - T 11-11-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RB11579 7e1255e20dde0a858162d97d833a063f 420 SUPERFAMILY SSF52540 92 124 8.22E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11579 7e1255e20dde0a858162d97d833a063f 420 SUPERFAMILY SSF52540 177 305 8.22E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11579 7e1255e20dde0a858162d97d833a063f 420 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 95 115 3.4E-10 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RB11579 7e1255e20dde0a858162d97d833a063f 420 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 378 397 3.4E-10 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RB11579 7e1255e20dde0a858162d97d833a063f 420 Pfam PF07728 AAA domain (dynein-related subfamily) 98 135 4.2E-5 T 11-11-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RB11579 7e1255e20dde0a858162d97d833a063f 420 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 329 397 6.9E-27 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RB11579 7e1255e20dde0a858162d97d833a063f 420 Gene3D G3DSA:1.10.1750.10 324 419 6.0E-32 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RB11579 7e1255e20dde0a858162d97d833a063f 420 SUPERFAMILY SSF48295 325 420 9.68E-29 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RB11579 7e1255e20dde0a858162d97d833a063f 420 SMART SM00382 94 250 3.0E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11579 7e1255e20dde0a858162d97d833a063f 420 SMART SM00760 328 397 2.2E-36 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RB11579 7e1255e20dde0a858162d97d833a063f 420 Pfam PF00308 Bacterial dnaA protein 145 302 1.9E-20 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.0E-18 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 8.0E-18 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.0E-18 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.0E-18 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 8.0E-18 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 5.2E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.2E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.2E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 Pfam PF00106 short chain dehydrogenase 2 198 7.6E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 SUPERFAMILY SSF51735 1 239 8.15E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 Gene3D G3DSA:3.40.50.720 2 237 1.3E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9586 9f04182dbe21d2b0c7e02a8ee6d1fdd9 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB2621 33a18965bf9a31eed27aaa7394a0cf55 229 SMART SM00448 4 118 4.8E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2621 33a18965bf9a31eed27aaa7394a0cf55 229 SUPERFAMILY SSF46894 132 227 8.22E-24 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB2621 33a18965bf9a31eed27aaa7394a0cf55 229 SUPERFAMILY SSF52172 2 129 7.54E-36 T 11-11-2016 IPR011006 CheY-like superfamily RB2621 33a18965bf9a31eed27aaa7394a0cf55 229 Gene3D G3DSA:1.10.10.10 134 229 8.5E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2621 33a18965bf9a31eed27aaa7394a0cf55 229 SMART SM00862 153 226 1.2E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RB2621 33a18965bf9a31eed27aaa7394a0cf55 229 Gene3D G3DSA:3.40.50.2300 2 127 7.6E-36 T 11-11-2016 RB2621 33a18965bf9a31eed27aaa7394a0cf55 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 6.6E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RB2621 33a18965bf9a31eed27aaa7394a0cf55 229 Pfam PF00072 Response regulator receiver domain 6 112 2.4E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7301 3e09475928d3516ccd78e93553733442 878 Pfam PF00270 DEAD/DEAH box helicase 66 207 5.8E-15 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB7301 3e09475928d3516ccd78e93553733442 878 SUPERFAMILY SSF52540 317 411 1.42E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7301 3e09475928d3516ccd78e93553733442 878 SUPERFAMILY SSF52540 66 284 1.42E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7301 3e09475928d3516ccd78e93553733442 878 SMART SM00490 311 397 2.3E-11 T 11-11-2016 IPR001650 Helicase, C-terminal RB7301 3e09475928d3516ccd78e93553733442 878 SMART SM00487 36 241 9.7E-26 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB7301 3e09475928d3516ccd78e93553733442 878 Gene3D G3DSA:3.40.50.300 320 405 5.4E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7301 3e09475928d3516ccd78e93553733442 878 Gene3D G3DSA:3.40.50.300 251 287 5.4E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7301 3e09475928d3516ccd78e93553733442 878 Pfam PF00271 Helicase conserved C-terminal domain 315 395 7.6E-5 T 11-11-2016 IPR001650 Helicase, C-terminal RB7301 3e09475928d3516ccd78e93553733442 878 Gene3D G3DSA:3.40.50.300 37 219 9.8E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8404 3819d3b03838fbf84fed48fb12343d63 239 Gene3D G3DSA:3.30.1600.10 17 56 1.2E-23 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain RB8404 3819d3b03838fbf84fed48fb12343d63 239 Gene3D G3DSA:3.30.1600.10 113 161 1.2E-23 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain RB8404 3819d3b03838fbf84fed48fb12343d63 239 Gene3D G3DSA:3.40.50.1220 2 16 9.8E-38 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB8404 3819d3b03838fbf84fed48fb12343d63 239 Gene3D G3DSA:3.40.50.1220 168 233 9.8E-38 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB8404 3819d3b03838fbf84fed48fb12343d63 239 Gene3D G3DSA:3.40.50.1220 66 112 9.8E-38 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB8404 3819d3b03838fbf84fed48fb12343d63 239 Pfam PF02146 Sir2 family 8 189 1.6E-46 T 11-11-2016 IPR003000 Sirtuin family GO:0070403 RB8404 3819d3b03838fbf84fed48fb12343d63 239 SUPERFAMILY SSF52467 2 236 9.82E-69 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB8404 3819d3b03838fbf84fed48fb12343d63 239 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 1 238 60.844 T 11-11-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 RB9308 a4eb1395c77dd4653823893596488727 629 Gene3D G3DSA:1.20.1600.10 375 611 1.7E-23 T 11-11-2016 RB9308 a4eb1395c77dd4653823893596488727 629 Pfam PF02321 Outer membrane efflux protein 418 600 1.4E-14 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB9308 a4eb1395c77dd4653823893596488727 629 SUPERFAMILY SSF56954 219 613 1.57E-32 T 11-11-2016 RB9308 a4eb1395c77dd4653823893596488727 629 SUPERFAMILY SSF56954 100 158 1.57E-32 T 11-11-2016 RB9308 a4eb1395c77dd4653823893596488727 629 Gene3D G3DSA:1.20.1600.10 95 128 1.1E-4 T 11-11-2016 RB9308 a4eb1395c77dd4653823893596488727 629 Gene3D G3DSA:1.20.1600.10 249 349 1.1E-4 T 11-11-2016 RB12534 190ed2207549467ef81fa9ae0c2adfcc 843 Pfam PF07637 Protein of unknown function (DUF1595) 431 489 2.1E-15 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB12534 190ed2207549467ef81fa9ae0c2adfcc 843 Pfam PF07631 Protein of unknown function (DUF1592) 498 626 6.8E-41 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB12534 190ed2207549467ef81fa9ae0c2adfcc 843 Pfam PF07635 Planctomycete cytochrome C 55 102 1.4E-5 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB12534 190ed2207549467ef81fa9ae0c2adfcc 843 Pfam PF07627 Protein of unknown function (DUF1588) 649 745 5.1E-32 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB12534 190ed2207549467ef81fa9ae0c2adfcc 843 Pfam PF07624 Protein of unknown function (DUF1585) 766 840 1.8E-19 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB12534 190ed2207549467ef81fa9ae0c2adfcc 843 Pfam PF07626 Protein of unknown function (DUF1587) 139 203 1.5E-14 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 SUPERFAMILY SSF55261 294 422 2.13E-35 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 Pfam PF01336 OB-fold nucleic acid binding domain 19 105 6.3E-13 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 Gene3D G3DSA:3.30.930.10 137 281 9.0E-110 T 11-11-2016 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 Gene3D G3DSA:3.30.930.10 418 587 9.0E-110 T 11-11-2016 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 588 6.5E-220 T 11-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 Pfam PF02938 GAD domain 313 407 2.4E-20 T 11-11-2016 IPR029351 GAD domain Reactome: R-HSA-379726 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 567 34.835 T 11-11-2016 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 Gene3D G3DSA:3.30.1360.30 282 417 2.1E-40 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 SUPERFAMILY SSF55681 428 588 6.57E-103 T 11-11-2016 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 SUPERFAMILY SSF55681 111 297 6.57E-103 T 11-11-2016 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 Gene3D G3DSA:2.40.50.140 3 111 1.3E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 4.6E-24 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 4.6E-24 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 195 207 4.6E-24 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 212 225 4.6E-24 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 123 562 1.4E-105 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8253 31deb674f0faa4a1cd38d0a27ce482a6 592 SUPERFAMILY SSF50249 2 108 9.21E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB11438 d6cd1103ab80b7a61d30028189ddf053 54 Pfam PF02810 SEC-C motif 32 50 1.1E-9 T 11-11-2016 IPR004027 SEC-C motif RB11438 d6cd1103ab80b7a61d30028189ddf053 54 Gene3D G3DSA:3.10.450.50 16 50 2.8E-10 T 11-11-2016 IPR032710 NTF2-like domain RB11438 d6cd1103ab80b7a61d30028189ddf053 54 SUPERFAMILY SSF103642 29 49 4.09E-8 T 11-11-2016 RB668 5e8b2ba25d3830a320ded841f0455b1c 296 SUPERFAMILY SSF53474 219 288 7.31E-40 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB668 5e8b2ba25d3830a320ded841f0455b1c 296 SUPERFAMILY SSF53474 19 151 7.31E-40 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB668 5e8b2ba25d3830a320ded841f0455b1c 296 Gene3D G3DSA:3.40.50.1820 27 287 2.2E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB668 5e8b2ba25d3830a320ded841f0455b1c 296 Pfam PF12146 Serine aminopeptidase, S33 43 274 6.6E-62 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 RB9666 527eb6a36dbdd2d7765d263371e6aeb9 227 SUPERFAMILY SSF144091 30 213 6.02E-18 T 11-11-2016 RB9666 527eb6a36dbdd2d7765d263371e6aeb9 227 Gene3D G3DSA:1.20.1540.10 35 212 9.5E-11 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB9666 527eb6a36dbdd2d7765d263371e6aeb9 227 Pfam PF01694 Rhomboid family 64 212 2.7E-10 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB9666 527eb6a36dbdd2d7765d263371e6aeb9 227 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 55 211 7.8E-42 T 11-11-2016 IPR023826 Rhomboid-like serine protease, proteobacteria RB8498 ea1ab73b5d0059f2b1ea00ad81f72da1 507 SUPERFAMILY SSF52425 24 202 2.62E-19 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB8498 ea1ab73b5d0059f2b1ea00ad81f72da1 507 Gene3D G3DSA:1.25.40.80 236 346 5.5E-27 T 11-11-2016 RB8498 ea1ab73b5d0059f2b1ea00ad81f72da1 507 SUPERFAMILY SSF48173 238 501 5.23E-55 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB8498 ea1ab73b5d0059f2b1ea00ad81f72da1 507 Gene3D G3DSA:1.10.579.10 347 483 1.4E-17 T 11-11-2016 RB4992 11286391cabbe5f25c729b4ff6a77318 446 Gene3D G3DSA:2.130.10.10 342 441 2.0E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB4992 11286391cabbe5f25c729b4ff6a77318 446 SUPERFAMILY SSF101908 277 434 8.63E-6 T 11-11-2016 RB251 289b495b5dde3523d86e941337f3024e 442 Pfam PF03129 Anticodon binding domain 353 426 1.2E-11 T 11-11-2016 IPR004154 Anticodon-binding RB251 289b495b5dde3523d86e941337f3024e 442 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 439 27.445 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 RB251 289b495b5dde3523d86e941337f3024e 442 SUPERFAMILY SSF55681 5 335 9.56E-76 T 11-11-2016 RB251 289b495b5dde3523d86e941337f3024e 442 Pfam PF13393 Histidyl-tRNA synthetase 9 327 2.7E-49 T 11-11-2016 RB251 289b495b5dde3523d86e941337f3024e 442 SUPERFAMILY SSF52954 342 426 5.59E-19 T 11-11-2016 IPR004154 Anticodon-binding RB251 289b495b5dde3523d86e941337f3024e 442 Gene3D G3DSA:3.30.930.10 2 191 2.3E-91 T 11-11-2016 RB251 289b495b5dde3523d86e941337f3024e 442 Gene3D G3DSA:3.30.930.10 244 335 2.3E-91 T 11-11-2016 RB251 289b495b5dde3523d86e941337f3024e 442 PIRSF PIRSF001549 1 440 2.3E-131 T 11-11-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 RB251 289b495b5dde3523d86e941337f3024e 442 Gene3D G3DSA:3.40.50.800 342 425 4.5E-23 T 11-11-2016 IPR004154 Anticodon-binding RB251 289b495b5dde3523d86e941337f3024e 442 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 424 1.4E-125 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 RB8588 03b7f076e5c09c38ab1534c751104972 115 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 43 58 - T 11-11-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RB8588 03b7f076e5c09c38ab1534c751104972 115 Pfam PF00381 PTS HPr component phosphorylation site 7 85 7.5E-26 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like RB8588 03b7f076e5c09c38ab1534c751104972 115 Gene3D G3DSA:3.30.1340.10 7 91 2.1E-29 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like RB8588 03b7f076e5c09c38ab1534c751104972 115 PRINTS PR00107 Phosphocarrier protein signature 42 57 4.3E-16 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like RB8588 03b7f076e5c09c38ab1534c751104972 115 PRINTS PR00107 Phosphocarrier protein signature 57 74 4.3E-16 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like RB8588 03b7f076e5c09c38ab1534c751104972 115 PRINTS PR00107 Phosphocarrier protein signature 17 33 4.3E-16 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like RB8588 03b7f076e5c09c38ab1534c751104972 115 SUPERFAMILY SSF55594 7 91 1.44E-24 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like RB8588 03b7f076e5c09c38ab1534c751104972 115 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 7 85 2.7E-25 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like RB1522 75bafc67403a41015abeb2cc20914f4c 387 Pfam PF13633 Prokaryotic N-terminal methylation site 40 65 2.4E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1522 75bafc67403a41015abeb2cc20914f4c 387 Pfam PF07596 Protein of unknown function (DUF1559) 66 368 1.1E-75 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB1522 75bafc67403a41015abeb2cc20914f4c 387 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 40 60 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1522 75bafc67403a41015abeb2cc20914f4c 387 Gene3D G3DSA:3.30.700.10 42 109 8.3E-7 T 11-11-2016 RB1522 75bafc67403a41015abeb2cc20914f4c 387 SUPERFAMILY SSF54523 42 171 4.0E-22 T 11-11-2016 RB1522 75bafc67403a41015abeb2cc20914f4c 387 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 39 61 2.2E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 Gene3D G3DSA:2.40.100.10 3 142 4.9E-66 T 11-11-2016 IPR029000 Cyclophilin-like domain RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 136 1.2E-52 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 PIRSF PIRSF001467 1 143 2.4E-60 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 SUPERFAMILY SSF50891 4 136 6.28E-61 T 11-11-2016 IPR029000 Cyclophilin-like domain RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 4.5E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 4.5E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 4.5E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 4.5E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 4.5E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB7244 c3bfa4d412508c56c1ee3af7ea8d99f3 143 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RB3488 d14b246b39ed22323ccb3876e34dabf4 414 Gene3D G3DSA:3.90.180.10 24 231 8.1E-43 T 11-11-2016 IPR011032 GroES-like RB3488 d14b246b39ed22323ccb3876e34dabf4 414 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 95 109 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RB3488 d14b246b39ed22323ccb3876e34dabf4 414 SUPERFAMILY SSF50129 34 231 8.52E-39 T 11-11-2016 IPR011032 GroES-like RB3488 d14b246b39ed22323ccb3876e34dabf4 414 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 58 186 1.8E-22 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB3488 d14b246b39ed22323ccb3876e34dabf4 414 Gene3D G3DSA:3.40.50.720 232 352 9.2E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3488 d14b246b39ed22323ccb3876e34dabf4 414 Pfam PF00107 Zinc-binding dehydrogenase 236 367 8.8E-19 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB3488 d14b246b39ed22323ccb3876e34dabf4 414 SUPERFAMILY SSF51735 194 363 1.4E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9932 d9aa76e41b11bc72131511804bc6651b 316 Gene3D G3DSA:3.20.20.150 6 288 7.5E-24 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB9932 d9aa76e41b11bc72131511804bc6651b 316 Pfam PF01261 Xylose isomerase-like TIM barrel 24 263 6.6E-23 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB9932 d9aa76e41b11bc72131511804bc6651b 316 SUPERFAMILY SSF51658 4 283 3.59E-27 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 224 1.5E-91 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 Gene3D G3DSA:3.40.50.790 68 158 4.9E-40 T 11-11-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 Gene3D G3DSA:3.30.190.20 17 67 2.2E-39 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 Gene3D G3DSA:3.30.190.20 160 223 2.2E-39 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 Pfam PF00687 Ribosomal protein L1p/L10e family 29 219 5.9E-51 T 11-11-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 SUPERFAMILY SSF56808 7 223 1.7E-75 T 11-11-2016 IPR023674 Ribosomal protein L1-like RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 225 38.209 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 ProSitePatterns PS01199 Ribosomal protein L1 signature. 119 138 - T 11-11-2016 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB12839 02334a1b3f1a9dad2f906eeec9e19f83 225 PIRSF PIRSF002155 1 225 1.5E-79 T 11-11-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 SUPERFAMILY SSF55205 53 491 3.18E-114 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 ProSitePatterns PS00104 EPSP synthase signature 1. 139 153 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 63 492 1.9E-119 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 59 494 31.756 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 58 488 2.1E-112 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 Gene3D G3DSA:3.65.10.10 71 300 9.1E-52 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 PIRSF PIRSF000505 41 498 3.6E-172 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 ProSitePatterns PS00885 EPSP synthase signature 2. 401 419 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RB2278 ac3da4b9ee7a383f682e1c1923e994b6 501 Gene3D G3DSA:3.65.10.10 301 491 2.2E-65 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RB11176 fd421be3023f71abeffde1640e3d2571 153 SUPERFAMILY SSF52799 6 141 3.91E-13 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like RB11176 fd421be3023f71abeffde1640e3d2571 153 Pfam PF04273 Putative phosphatase (DUF442) 6 107 3.0E-24 T 11-11-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 RB11176 fd421be3023f71abeffde1640e3d2571 153 Gene3D G3DSA:3.90.190.10 1 139 6.8E-41 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like RB6780 d9f253cb2407ffba3b192582435b7d4d 557 Gene3D G3DSA:1.10.10.10 484 550 1.7E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6780 d9f253cb2407ffba3b192582435b7d4d 557 Pfam PF04542 Sigma-70 region 2 381 437 2.2E-11 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 378 544 3.3E-28 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 PRINTS PR00046 Major sigma-70 factor signature 515 530 1.6E-21 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 PRINTS PR00046 Major sigma-70 factor signature 530 541 1.6E-21 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 PRINTS PR00046 Major sigma-70 factor signature 493 505 1.6E-21 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 PRINTS PR00046 Major sigma-70 factor signature 404 417 1.6E-21 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 PRINTS PR00046 Major sigma-70 factor signature 428 436 1.6E-21 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 515 541 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 Gene3D G3DSA:1.10.601.10 165 445 6.5E-40 T 11-11-2016 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 SUPERFAMILY SSF88946 107 335 1.44E-41 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 SUPERFAMILY SSF88946 364 445 1.44E-41 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 SUPERFAMILY SSF88659 466 548 1.83E-20 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6780 d9f253cb2407ffba3b192582435b7d4d 557 Pfam PF04545 Sigma-70, region 4 490 543 3.9E-19 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11673 754e808fbf9d33faf199711da4ef2990 598 SUPERFAMILY SSF54980 399 494 2.3E-21 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB11673 754e808fbf9d33faf199711da4ef2990 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 268.307 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 RB11673 754e808fbf9d33faf199711da4ef2990 598 SUPERFAMILY SSF50447 165 288 4.78E-29 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB11673 754e808fbf9d33faf199711da4ef2990 598 Gene3D G3DSA:3.40.50.300 2 192 1.2E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11673 754e808fbf9d33faf199711da4ef2990 598 Pfam PF06421 GTP-binding protein LepA C-terminus 488 594 7.8E-45 T 11-11-2016 IPR013842 GTP-binding protein LepA, C-terminal RB11673 754e808fbf9d33faf199711da4ef2990 598 SUPERFAMILY SSF52540 2 205 1.37E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11673 754e808fbf9d33faf199711da4ef2990 598 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.8E-53 T 11-11-2016 RB11673 754e808fbf9d33faf199711da4ef2990 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site RB11673 754e808fbf9d33faf199711da4ef2990 598 PRINTS PR00315 GTP-binding elongation factor signature 90 101 9.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB11673 754e808fbf9d33faf199711da4ef2990 598 PRINTS PR00315 GTP-binding elongation factor signature 49 57 9.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB11673 754e808fbf9d33faf199711da4ef2990 598 PRINTS PR00315 GTP-binding elongation factor signature 126 135 9.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB11673 754e808fbf9d33faf199711da4ef2990 598 PRINTS PR00315 GTP-binding elongation factor signature 74 84 9.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB11673 754e808fbf9d33faf199711da4ef2990 598 PRINTS PR00315 GTP-binding elongation factor signature 6 19 9.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB11673 754e808fbf9d33faf199711da4ef2990 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 174 1.5E-20 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB11673 754e808fbf9d33faf199711da4ef2990 598 Gene3D G3DSA:3.30.70.240 401 490 7.4E-18 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB11673 754e808fbf9d33faf199711da4ef2990 598 Gene3D G3DSA:3.30.70.870 294 369 4.1E-21 T 11-11-2016 RB11673 754e808fbf9d33faf199711da4ef2990 598 SUPERFAMILY SSF54980 294 370 8.27E-16 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB11673 754e808fbf9d33faf199711da4ef2990 598 Gene3D G3DSA:2.40.30.10 193 289 2.3E-22 T 11-11-2016 RB11673 754e808fbf9d33faf199711da4ef2990 598 TIGRFAM TIGR01393 lepA: elongation factor 4 2 596 8.5E-283 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 RB11673 754e808fbf9d33faf199711da4ef2990 598 Pfam PF00679 Elongation factor G C-terminus 400 486 5.1E-17 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB1756 40f24be3b617fe2c1561ab97114d6e98 336 Pfam PF13646 HEAT repeats 44 121 1.6E-6 T 11-11-2016 RB1756 40f24be3b617fe2c1561ab97114d6e98 336 SUPERFAMILY SSF46626 167 259 8.55E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1756 40f24be3b617fe2c1561ab97114d6e98 336 SUPERFAMILY SSF46626 298 322 8.55E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1756 40f24be3b617fe2c1561ab97114d6e98 336 Pfam PF00034 Cytochrome c 184 322 2.3E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1756 40f24be3b617fe2c1561ab97114d6e98 336 Gene3D G3DSA:1.10.760.10 298 322 3.4E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1756 40f24be3b617fe2c1561ab97114d6e98 336 Gene3D G3DSA:1.10.760.10 166 254 3.4E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1756 40f24be3b617fe2c1561ab97114d6e98 336 Gene3D G3DSA:1.25.10.10 44 121 1.2E-5 T 11-11-2016 IPR011989 Armadillo-like helical RB1756 40f24be3b617fe2c1561ab97114d6e98 336 SUPERFAMILY SSF48371 43 159 1.38E-8 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 ProSitePatterns PS00012 Phosphopantetheine attachment site. 691 706 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 Gene3D G3DSA:3.30.300.30 502 608 2.8E-16 T 11-11-2016 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 Pfam PF00550 Phosphopantetheine attachment site 681 732 1.8E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 Gene3D G3DSA:3.40.50.980 22 199 1.2E-31 T 11-11-2016 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 SMART SM00823 Phosphopantetheine attachment site 666 736 1.8E-14 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 SUPERFAMILY SSF56801 18 375 2.22E-112 T 11-11-2016 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 SUPERFAMILY SSF56801 417 612 2.22E-112 T 11-11-2016 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 Gene3D G3DSA:3.40.50.980 200 369 1.3E-35 T 11-11-2016 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 SUPERFAMILY SSF47336 681 753 1.3E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 Gene3D G3DSA:1.10.1200.10 678 738 2.0E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 Pfam PF00501 AMP-binding enzyme 29 511 1.3E-84 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 11-11-2016 IPR020845 AMP-binding, conserved site RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 Gene3D G3DSA:2.30.38.10 419 501 3.2E-19 T 11-11-2016 RB2103 46d4933d7b5f6c5072c9b56e7784d2cd 781 SMART SM01294 678 732 0.0024 T 11-11-2016 RB8077 eee2795b797662ef764f6ad499e6df5b 563 Gene3D G3DSA:3.40.50.1460 170 444 4.3E-34 T 11-11-2016 IPR029030 Caspase-like domain RB8077 eee2795b797662ef764f6ad499e6df5b 563 Pfam PF01364 Peptidase family C25 52 444 3.4E-56 T 11-11-2016 IPR001769 Gingipain GO:0006508|GO:0008234 RB8077 eee2795b797662ef764f6ad499e6df5b 563 Gene3D G3DSA:3.40.50.10390 43 168 9.6E-20 T 11-11-2016 IPR029031 Gingipain, N-terminal RB8077 eee2795b797662ef764f6ad499e6df5b 563 SUPERFAMILY SSF52129 41 447 5.13E-71 T 11-11-2016 IPR029030 Caspase-like domain RB12081 ea313949445aad61177bb29d4a1889dc 545 PIRSF PIRSF001267 28 540 1.4E-83 T 11-11-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 RB12081 ea313949445aad61177bb29d4a1889dc 545 Pfam PF02541 Ppx/GppA phosphatase family 59 342 5.1E-33 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 RB12081 ea313949445aad61177bb29d4a1889dc 545 Gene3D G3DSA:3.30.420.40 32 160 1.1E-35 T 11-11-2016 RB12081 ea313949445aad61177bb29d4a1889dc 545 SUPERFAMILY SSF109604 357 541 5.42E-45 T 11-11-2016 RB12081 ea313949445aad61177bb29d4a1889dc 545 Gene3D G3DSA:1.10.3210.10 371 491 2.4E-6 T 11-11-2016 IPR006674 HD domain RB12081 ea313949445aad61177bb29d4a1889dc 545 Pfam PF01966 HD domain 371 459 7.1E-9 T 11-11-2016 IPR006674 HD domain RB12081 ea313949445aad61177bb29d4a1889dc 545 SUPERFAMILY SSF53067 171 342 5.61E-26 T 11-11-2016 RB12081 ea313949445aad61177bb29d4a1889dc 545 SUPERFAMILY SSF53067 37 159 6.91E-28 T 11-11-2016 RB12081 ea313949445aad61177bb29d4a1889dc 545 Gene3D G3DSA:3.30.420.150 169 342 4.9E-21 T 11-11-2016 RB7430 d4115159169e310fcb34aab150b32e2a 456 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 46 444 4.3E-91 T 11-11-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RB7430 d4115159169e310fcb34aab150b32e2a 456 SUPERFAMILY SSF51556 78 390 9.68E-81 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB7430 d4115159169e310fcb34aab150b32e2a 456 Gene3D G3DSA:3.20.20.140 92 430 1.8E-83 T 11-11-2016 RB7430 d4115159169e310fcb34aab150b32e2a 456 Gene3D G3DSA:2.30.40.10 25 91 1.1E-10 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB7430 d4115159169e310fcb34aab150b32e2a 456 Pfam PF01979 Amidohydrolase family 74 443 1.2E-14 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB7430 d4115159169e310fcb34aab150b32e2a 456 SUPERFAMILY SSF51338 23 77 3.76E-19 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB7430 d4115159169e310fcb34aab150b32e2a 456 SUPERFAMILY SSF51338 390 446 3.76E-19 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB7430 d4115159169e310fcb34aab150b32e2a 456 Hamap MF_00220_B Dihydroorotase [pyrC]. 23 448 33.202 T 11-11-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RB10346 536e72bee3ba81b944f12143f9aacef8 275 SUPERFAMILY SSF53335 223 265 2.05E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10346 536e72bee3ba81b944f12143f9aacef8 275 SUPERFAMILY SSF53335 13 171 2.05E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10346 536e72bee3ba81b944f12143f9aacef8 275 Pfam PF13847 Methyltransferase domain 47 169 3.5E-7 T 11-11-2016 IPR025714 Methyltransferase domain RB10346 536e72bee3ba81b944f12143f9aacef8 275 Gene3D G3DSA:3.40.50.150 13 238 6.9E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Gene3D G3DSA:1.10.150.80 820 892 1.5E-7 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Gene3D G3DSA:3.40.50.300 42 225 6.7E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 SUPERFAMILY SSF46785 639 739 5.03E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 SUPERFAMILY SSF52540 87 378 2.36E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Gene3D G3DSA:3.40.50.300 230 372 2.6E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Pfam PF09382 RQC domain 639 737 6.7E-20 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 SUPERFAMILY SSF47819 818 898 1.09E-12 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 SMART SM00956 638 743 1.2E-21 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Gene3D G3DSA:1.10.10.10 534 594 2.7E-39 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Gene3D G3DSA:1.10.10.10 631 746 2.7E-39 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 42 392 1.4E-124 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Pfam PF00271 Helicase conserved C-terminal domain 251 357 1.1E-18 T 11-11-2016 IPR001650 Helicase, C-terminal RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Pfam PF00570 HRDC domain 820 885 2.4E-10 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Pfam PF00270 DEAD/DEAH box helicase 50 211 6.4E-18 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 SMART SM00487 44 241 3.7E-33 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 Pfam PF16124 RecQ zinc-binding 546 594 1.4E-11 T 11-11-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RB10487 8028a787f8273ef3d4a4b31287ed7f8d 1002 SMART SM00490 275 357 6.6E-28 T 11-11-2016 IPR001650 Helicase, C-terminal RB773 fd762fe9ab27b62a94e31c4b710f6972 562 SUPERFAMILY SSF53649 121 557 2.04E-119 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB773 fd762fe9ab27b62a94e31c4b710f6972 562 ProSitePatterns PS00523 Sulfatases signature 1. 169 181 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB773 fd762fe9ab27b62a94e31c4b710f6972 562 Gene3D G3DSA:3.40.720.10 120 464 1.5E-102 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB773 fd762fe9ab27b62a94e31c4b710f6972 562 Pfam PF00884 Sulfatase 123 449 3.8E-70 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB773 fd762fe9ab27b62a94e31c4b710f6972 562 Gene3D G3DSA:3.30.1120.10 465 556 5.5E-16 T 11-11-2016 RB773 fd762fe9ab27b62a94e31c4b710f6972 562 ProSitePatterns PS00149 Sulfatases signature 2. 215 225 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB236 7eace5229c39d792e92646e98e5e65f7 432 Gene3D G3DSA:3.60.60.10 99 379 3.4E-47 T 11-11-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 Reactome: R-HSA-1660662 RB236 7eace5229c39d792e92646e98e5e65f7 432 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 92 300 3.3E-12 T 11-11-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RB236 7eace5229c39d792e92646e98e5e65f7 432 SUPERFAMILY SSF56235 92 380 6.02E-50 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB284 7bdd0be40778c8492cd6f0e4032579ee 392 SUPERFAMILY SSF109604 39 381 3.54E-67 T 11-11-2016 RB284 7bdd0be40778c8492cd6f0e4032579ee 392 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 27 382 30.422 T 11-11-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RB284 7bdd0be40778c8492cd6f0e4032579ee 392 Gene3D G3DSA:1.10.3210.10 45 230 1.0E-62 T 11-11-2016 IPR006674 HD domain RB284 7bdd0be40778c8492cd6f0e4032579ee 392 Gene3D G3DSA:1.10.3210.10 285 389 1.0E-62 T 11-11-2016 IPR006674 HD domain RB284 7bdd0be40778c8492cd6f0e4032579ee 392 Pfam PF01966 HD domain 87 207 4.3E-15 T 11-11-2016 IPR006674 HD domain RB284 7bdd0be40778c8492cd6f0e4032579ee 392 Pfam PF13286 Phosphohydrolase-associated domain 294 376 3.9E-20 T 11-11-2016 IPR026875 Phosphohydrolase-associated domain RB284 7bdd0be40778c8492cd6f0e4032579ee 392 TIGRFAM TIGR00277 HDIG: HDIG domain 85 157 2.3E-7 T 11-11-2016 IPR006675 HDIG domain RB284 7bdd0be40778c8492cd6f0e4032579ee 392 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 50 176 4.5E-48 T 11-11-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 RB284 7bdd0be40778c8492cd6f0e4032579ee 392 SMART SM00471 83 217 6.1E-13 T 11-11-2016 IPR003607 HD/PDEase domain RB12921 582aa1bd97f7faa4bc7d138481275938 683 Gene3D G3DSA:3.40.50.920 560 682 9.4E-45 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RB12921 582aa1bd97f7faa4bc7d138481275938 683 Pfam PF02780 Transketolase, C-terminal domain 563 677 6.4E-11 T 11-11-2016 IPR033248 Transketolase, C-terminal domain RB12921 582aa1bd97f7faa4bc7d138481275938 683 SUPERFAMILY SSF52518 360 548 4.17E-61 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB12921 582aa1bd97f7faa4bc7d138481275938 683 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 12 357 9.2E-128 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RB12921 582aa1bd97f7faa4bc7d138481275938 683 SUPERFAMILY SSF52922 556 682 1.1E-39 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RB12921 582aa1bd97f7faa4bc7d138481275938 683 SMART SM00861 374 546 4.9E-61 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RB12921 582aa1bd97f7faa4bc7d138481275938 683 ProSitePatterns PS00802 Transketolase signature 2. 488 504 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RB12921 582aa1bd97f7faa4bc7d138481275938 683 Gene3D G3DSA:3.40.50.970 352 557 1.5E-69 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB12921 582aa1bd97f7faa4bc7d138481275938 683 SUPERFAMILY SSF52518 9 342 7.02E-101 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB12921 582aa1bd97f7faa4bc7d138481275938 683 Pfam PF02779 Transketolase, pyrimidine binding domain 375 545 4.9E-38 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RB12921 582aa1bd97f7faa4bc7d138481275938 683 TIGRFAM TIGR00232 tktlase_bact: transketolase 14 681 1.6E-240 T 11-11-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RB12921 582aa1bd97f7faa4bc7d138481275938 683 Gene3D G3DSA:3.40.50.970 6 342 1.1E-111 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB12325 b4e755ff07d3b67c29b62669d0f97731 529 SUPERFAMILY SSF53649 49 501 1.06E-113 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB12325 b4e755ff07d3b67c29b62669d0f97731 529 Gene3D G3DSA:3.40.720.10 47 409 1.9E-98 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12325 b4e755ff07d3b67c29b62669d0f97731 529 Pfam PF00884 Sulfatase 50 391 6.3E-64 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB12325 b4e755ff07d3b67c29b62669d0f97731 529 Gene3D G3DSA:3.30.1120.10 410 502 6.3E-18 T 11-11-2016 RB12325 b4e755ff07d3b67c29b62669d0f97731 529 ProSitePatterns PS00149 Sulfatases signature 2. 145 155 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB12325 b4e755ff07d3b67c29b62669d0f97731 529 ProSitePatterns PS00523 Sulfatases signature 1. 97 109 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB12325 b4e755ff07d3b67c29b62669d0f97731 529 Pfam PF16385 Domain of unknown function 403 495 2.7E-11 T 11-11-2016 IPR032158 Domain of unknown function DUF4994 RB9228 cb47aa825d43349b12580698f24eb5dc 637 Gene3D G3DSA:3.90.1200.10 522 549 0.001 T 11-11-2016 RB9228 cb47aa825d43349b12580698f24eb5dc 637 SUPERFAMILY SSF56112 438 572 1.65E-9 T 11-11-2016 IPR011009 Protein kinase-like domain RB2146 37b0eb11b1ae31ae8e9d0ea0edc64b92 139 Gene3D G3DSA:1.10.287.1040 25 82 2.5E-17 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RB2146 37b0eb11b1ae31ae8e9d0ea0edc64b92 139 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 26 64 6.0E-16 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RB2146 37b0eb11b1ae31ae8e9d0ea0edc64b92 139 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 25 85 12.457 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RB2146 37b0eb11b1ae31ae8e9d0ea0edc64b92 139 Pfam PF02609 Exonuclease VII small subunit 26 76 2.3E-15 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RB2146 37b0eb11b1ae31ae8e9d0ea0edc64b92 139 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 25 78 5.0E-16 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RB2146 37b0eb11b1ae31ae8e9d0ea0edc64b92 139 SUPERFAMILY SSF116842 25 84 3.14E-14 T 11-11-2016 RB680 51a7c56b766ffddab6bbd740730df404 290 SMART SM00342 203 286 5.1E-29 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB680 51a7c56b766ffddab6bbd740730df404 290 SUPERFAMILY SSF46689 239 289 9.86E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB680 51a7c56b766ffddab6bbd740730df404 290 Gene3D G3DSA:2.60.120.280 19 173 5.9E-11 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB680 51a7c56b766ffddab6bbd740730df404 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB680 51a7c56b766ffddab6bbd740730df404 290 SUPERFAMILY SSF51182 14 92 4.15E-10 T 11-11-2016 IPR011051 RmlC-like cupin domain RB680 51a7c56b766ffddab6bbd740730df404 290 Pfam PF02311 AraC-like ligand binding domain 23 129 1.6E-9 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB680 51a7c56b766ffddab6bbd740730df404 290 Gene3D G3DSA:1.10.10.60 240 289 4.5E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB680 51a7c56b766ffddab6bbd740730df404 290 SUPERFAMILY SSF46689 188 237 3.76E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB680 51a7c56b766ffddab6bbd740730df404 290 Gene3D G3DSA:1.10.10.60 187 239 6.3E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB680 51a7c56b766ffddab6bbd740730df404 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 7.9E-8 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB680 51a7c56b766ffddab6bbd740730df404 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 7.9E-8 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB680 51a7c56b766ffddab6bbd740730df404 290 Pfam PF12833 Helix-turn-helix domain 210 288 2.0E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 ProSitePatterns PS01071 grpE protein signature. 150 193 - T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 Gene3D G3DSA:2.30.22.10 140 196 9.1E-22 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 SUPERFAMILY SSF58014 42 138 6.41E-21 T 11-11-2016 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 Hamap MF_01151 Protein GrpE [grpE]. 2 195 18.704 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 Gene3D G3DSA:3.90.20.20 39 138 4.5E-23 T 11-11-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 SUPERFAMILY SSF51064 140 196 2.35E-17 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 Pfam PF01025 GrpE 31 194 1.3E-48 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 PRINTS PR00773 GrpE protein signature 90 105 9.6E-24 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 PRINTS PR00773 GrpE protein signature 62 78 9.6E-24 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 PRINTS PR00773 GrpE protein signature 147 162 9.6E-24 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RB8974 2ee412e2a83da824d1ff3cb922be4daf 200 PRINTS PR00773 GrpE protein signature 174 193 9.6E-24 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RB3236 e8bbd117e98f64de354b86b4f2e1a7d3 510 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 413 429 - T 11-11-2016 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 RB3236 e8bbd117e98f64de354b86b4f2e1a7d3 510 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 459 4.8E-66 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RB3236 e8bbd117e98f64de354b86b4f2e1a7d3 510 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 34 460 8.0E-74 T 11-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 Gene3D G3DSA:3.40.50.2300 38 171 7.0E-32 T 11-11-2016 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 Pfam PF00072 Response regulator receiver domain 41 150 3.9E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 Gene3D G3DSA:1.10.8.60 352 428 2.3E-26 T 11-11-2016 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 Pfam PF00158 Sigma-54 interaction domain 180 346 2.5E-66 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 Gene3D G3DSA:1.10.10.60 429 484 4.2E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 203 216 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 Gene3D G3DSA:3.40.50.300 177 351 2.6E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 265 280 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 Pfam PF02954 Bacterial regulatory protein, Fis family 444 482 1.4E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 SMART SM00448 38 150 4.8E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 392 401 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 SUPERFAMILY SSF52540 179 421 9.57E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 SUPERFAMILY SSF46689 392 484 2.64E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 SMART SM00382 199 341 5.4E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain RB2396 832d2ca1c9f16f85d4f2d8d6a0b202a8 485 SUPERFAMILY SSF52172 37 224 1.12E-39 T 11-11-2016 IPR011006 CheY-like superfamily RB10638 9d3e7c1613e19023f794f6958049de83 260 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RB10638 9d3e7c1613e19023f794f6958049de83 260 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 37.985 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RB10638 9d3e7c1613e19023f794f6958049de83 260 Gene3D G3DSA:1.10.287.610 100 152 2.2E-15 T 11-11-2016 RB10638 9d3e7c1613e19023f794f6958049de83 260 Pfam PF00318 Ribosomal protein S2 9 224 2.7E-83 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB10638 9d3e7c1613e19023f794f6958049de83 260 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.0E-35 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB10638 9d3e7c1613e19023f794f6958049de83 260 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.0E-35 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB10638 9d3e7c1613e19023f794f6958049de83 260 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.0E-35 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB10638 9d3e7c1613e19023f794f6958049de83 260 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.0E-35 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB10638 9d3e7c1613e19023f794f6958049de83 260 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.0E-35 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB10638 9d3e7c1613e19023f794f6958049de83 260 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.0E-35 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB10638 9d3e7c1613e19023f794f6958049de83 260 Gene3D G3DSA:3.40.50.10490 158 244 3.0E-60 T 11-11-2016 RB10638 9d3e7c1613e19023f794f6958049de83 260 Gene3D G3DSA:3.40.50.10490 23 99 3.0E-60 T 11-11-2016 RB10638 9d3e7c1613e19023f794f6958049de83 260 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 226 3.9E-83 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RB10638 9d3e7c1613e19023f794f6958049de83 260 SUPERFAMILY SSF52313 6 232 2.88E-83 T 11-11-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain RB5918 1ab874e582bad633410d30d55ed2099d 252 Pfam PF02237 Biotin protein ligase C terminal domain 202 243 2.8E-4 T 11-11-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB5918 1ab874e582bad633410d30d55ed2099d 252 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 8 244 8.6E-37 T 11-11-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB5918 1ab874e582bad633410d30d55ed2099d 252 Gene3D G3DSA:3.30.930.10 8 195 1.4E-39 T 11-11-2016 RB5918 1ab874e582bad633410d30d55ed2099d 252 Gene3D G3DSA:2.30.30.100 201 243 6.9E-10 T 11-11-2016 RB5918 1ab874e582bad633410d30d55ed2099d 252 SUPERFAMILY SSF50037 201 243 4.58E-6 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal RB5918 1ab874e582bad633410d30d55ed2099d 252 Pfam PF03099 Biotin/lipoate A/B protein ligase family 10 123 2.3E-10 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RB5918 1ab874e582bad633410d30d55ed2099d 252 SUPERFAMILY SSF55681 7 188 5.96E-37 T 11-11-2016 RB6537 4678d26d201f169e8cff7d242d7b6cd2 384 Gene3D G3DSA:2.70.98.10 43 383 2.2E-140 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RB6537 4678d26d201f169e8cff7d242d7b6cd2 384 PIRSF PIRSF005096 29 384 2.9E-136 T 11-11-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 RB6537 4678d26d201f169e8cff7d242d7b6cd2 384 Pfam PF01263 Aldose 1-epimerase 47 379 1.4E-94 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RB6537 4678d26d201f169e8cff7d242d7b6cd2 384 SUPERFAMILY SSF74650 38 382 1.26E-119 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 568 733 8.3E-27 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 Gene3D G3DSA:3.30.1120.10 459 529 3.0E-12 T 11-11-2016 RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 Pfam PF00884 Sulfatase 46 428 2.8E-62 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 ProSitePatterns PS00523 Sulfatases signature 1. 92 104 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 ProSitePatterns PS00149 Sulfatases signature 2. 134 144 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 SUPERFAMILY SSF53649 328 529 2.97E-125 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 SUPERFAMILY SSF53649 44 278 2.97E-125 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 Gene3D G3DSA:3.40.50.1110 535 745 4.1E-64 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 SUPERFAMILY SSF52266 545 743 2.14E-52 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 Pfam PF16347 Domain of unknown function (DUF4976) 430 531 4.0E-28 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 Gene3D G3DSA:3.40.720.10 293 445 9.1E-121 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB973 d48fe44b3221c39f9dca82e6aa1787f4 747 Gene3D G3DSA:3.40.720.10 43 247 9.1E-121 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 Gene3D G3DSA:1.25.10.10 781 914 8.7E-8 T 11-11-2016 IPR011989 Armadillo-like helical RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 Gene3D G3DSA:1.25.10.10 1138 1208 8.7E-8 T 11-11-2016 IPR011989 Armadillo-like helical RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 Gene3D G3DSA:1.25.10.10 1071 1094 8.7E-8 T 11-11-2016 IPR011989 Armadillo-like helical RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 393 768 1.4E-58 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 Pfam PF06283 Trehalose utilisation 95 292 3.5E-35 T 11-11-2016 IPR029010 ThuA-like domain RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 SUPERFAMILY SSF52317 92 298 6.18E-45 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 SUPERFAMILY SSF46626 1341 1363 5.87E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 SUPERFAMILY SSF46626 1227 1288 5.87E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 Gene3D G3DSA:1.10.760.10 1341 1364 2.2E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 Gene3D G3DSA:1.10.760.10 1221 1305 2.2E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 SUPERFAMILY SSF50952 677 734 8.24E-6 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 SUPERFAMILY SSF50952 355 621 8.24E-6 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1234 1364 1.1E-30 T 11-11-2016 IPR013427 Haem-binding domain, putative RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 Gene3D G3DSA:3.40.50.880 89 300 3.0E-62 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 Pfam PF00034 Cytochrome c 1238 1364 1.2E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB524 28b5b85073a50125ba016bf5b6ab3e95 1557 SUPERFAMILY SSF48371 783 934 1.06E-8 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF51120 156 328 1.67E-6 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF51120 1123 1257 7.59E-7 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF51120 1289 1330 7.59E-7 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 Pfam PF07595 Planctomycete extracellular 16 39 1.8E-4 T 11-11-2016 IPR011506 Planctomycete extracellular RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF51120 688 840 5.76E-8 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF51120 529 644 5.76E-8 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SMART SM00112 63 141 0.0081 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 Gene3D G3DSA:2.60.40.670 2884 2957 2.2E-5 T 11-11-2016 IPR000601 PKD domain RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 Pfam PF07705 CARDB 2136 2256 6.4E-7 T 11-11-2016 IPR011635 CARDB domain RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF49299 2041 2130 1.29E-5 T 11-11-2016 IPR000601 PKD domain RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 Gene3D G3DSA:2.60.40.60 48 131 6.3E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF51120 2970 3122 9.94E-16 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 Gene3D G3DSA:2.60.40.670 2097 2130 6.2E-8 T 11-11-2016 IPR000601 PKD domain RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 Gene3D G3DSA:2.60.40.670 1947 1994 6.2E-8 T 11-11-2016 IPR000601 PKD domain RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF49313 48 135 1.44E-7 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF49299 2884 2955 7.98E-6 T 11-11-2016 IPR000601 PKD domain RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF51120 869 985 1.57E-5 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RB10149 ff0ba004b5235a4640cd5046a279a9cd 3178 SUPERFAMILY SSF51120 1026 1177 1.57E-5 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal RB5321 1f481ed18d85fefb073bc447e9514bfa 294 Gene3D G3DSA:3.20.20.150 9 291 2.0E-53 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB5321 1f481ed18d85fefb073bc447e9514bfa 294 SUPERFAMILY SSF51658 20 288 1.7E-50 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB5321 1f481ed18d85fefb073bc447e9514bfa 294 Pfam PF01261 Xylose isomerase-like TIM barrel 27 243 1.9E-33 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB5905 4bed200143ba51e3fdead8cd9fe3c775 226 Pfam PF00149 Calcineurin-like phosphoesterase 11 151 1.0E-11 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB5905 4bed200143ba51e3fdead8cd9fe3c775 226 Gene3D G3DSA:3.60.21.10 7 218 7.3E-47 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5905 4bed200143ba51e3fdead8cd9fe3c775 226 SUPERFAMILY SSF56300 9 210 1.47E-41 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB13025 3919b108a597dca1a40c1a8a70b186ac 193 Pfam PF01494 FAD binding domain 38 119 6.9E-10 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 RB13025 3919b108a597dca1a40c1a8a70b186ac 193 Gene3D G3DSA:3.50.50.60 77 150 1.5E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB13025 3919b108a597dca1a40c1a8a70b186ac 193 SUPERFAMILY SSF51905 70 182 1.5E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7852 2690e47861a5826cfa84931c32db05f7 196 Pfam PF00673 ribosomal L5P family C-terminus 91 184 3.1E-37 T 11-11-2016 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7852 2690e47861a5826cfa84931c32db05f7 196 SUPERFAMILY SSF55282 10 185 4.24E-71 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7852 2690e47861a5826cfa84931c32db05f7 196 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 8 186 41.258 T 11-11-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7852 2690e47861a5826cfa84931c32db05f7 196 Pfam PF00281 Ribosomal protein L5 31 87 8.1E-23 T 11-11-2016 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7852 2690e47861a5826cfa84931c32db05f7 196 PIRSF PIRSF002161 3 193 2.2E-68 T 11-11-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7852 2690e47861a5826cfa84931c32db05f7 196 ProSitePatterns PS00358 Ribosomal protein L5 signature. 64 80 - T 11-11-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7852 2690e47861a5826cfa84931c32db05f7 196 Gene3D G3DSA:3.30.1440.10 9 185 1.3E-70 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB5653 a35175febce65f067b625d73f7ee0499 500 SUPERFAMILY SSF51971 382 476 2.35E-8 T 11-11-2016 RB5653 a35175febce65f067b625d73f7ee0499 500 SUPERFAMILY SSF51971 144 414 2.12E-64 T 11-11-2016 RB5653 a35175febce65f067b625d73f7ee0499 500 Gene3D G3DSA:3.50.50.60 236 414 5.8E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5653 a35175febce65f067b625d73f7ee0499 500 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 133 1.5E-23 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RB5653 a35175febce65f067b625d73f7ee0499 500 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 487 1.0E-240 T 11-11-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RB5653 a35175febce65f067b625d73f7ee0499 500 Gene3D G3DSA:3.40.50.720 149 235 2.1E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5653 a35175febce65f067b625d73f7ee0499 500 Gene3D G3DSA:3.40.50.720 416 493 2.1E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5653 a35175febce65f067b625d73f7ee0499 500 Gene3D G3DSA:1.10.1060.10 3 148 3.5E-38 T 11-11-2016 RB5653 a35175febce65f067b625d73f7ee0499 500 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 469 5.0E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5653 a35175febce65f067b625d73f7ee0499 500 PRINTS PR00419 Adrenodoxin reductase family signature 212 222 5.4E-24 T 11-11-2016 RB5653 a35175febce65f067b625d73f7ee0499 500 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 5.4E-24 T 11-11-2016 RB5653 a35175febce65f067b625d73f7ee0499 500 PRINTS PR00419 Adrenodoxin reductase family signature 147 169 5.4E-24 T 11-11-2016 RB5653 a35175febce65f067b625d73f7ee0499 500 PRINTS PR00419 Adrenodoxin reductase family signature 170 183 5.4E-24 T 11-11-2016 RB5653 a35175febce65f067b625d73f7ee0499 500 SUPERFAMILY SSF46548 2 156 3.14E-36 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RB1939 22f778ca18b4ae70ad83da4163dabd6b 502 SUPERFAMILY SSF51735 103 273 1.44E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1939 22f778ca18b4ae70ad83da4163dabd6b 502 SUPERFAMILY SSF55347 247 397 7.85E-18 T 11-11-2016 RB1939 22f778ca18b4ae70ad83da4163dabd6b 502 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 108 240 3.6E-14 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB1939 22f778ca18b4ae70ad83da4163dabd6b 502 Gene3D G3DSA:3.30.360.10 256 458 6.6E-28 T 11-11-2016 RB1939 22f778ca18b4ae70ad83da4163dabd6b 502 Gene3D G3DSA:3.40.50.720 105 255 5.8E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 401 452 6.9E-7 T 11-11-2016 IPR013431 Delta-60 repeat RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 650 669 2.2E-5 T 11-11-2016 IPR013431 Delta-60 repeat RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 576 615 2.9E-4 T 11-11-2016 IPR013431 Delta-60 repeat RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 462 497 1.2E-6 T 11-11-2016 IPR013431 Delta-60 repeat RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 475 492 0.0011 T 11-11-2016 IPR013431 Delta-60 repeat RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 422 444 0.0025 T 11-11-2016 IPR013431 Delta-60 repeat RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 648 664 0.0049 T 11-11-2016 IPR013431 Delta-60 repeat RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 Pfam PF16841 Ca-dependent carbohydrate-binding module xylan-binding 182 268 3.3E-20 T 11-11-2016 IPR031768 Carbohydrate binding module, xylan-binding domain MetaCyc: PWY-6784 RB3950 f1a48b5c310be0bb6bb590c0f40eec47 714 Pfam PF16841 Ca-dependent carbohydrate-binding module xylan-binding 58 146 2.7E-16 T 11-11-2016 IPR031768 Carbohydrate binding module, xylan-binding domain MetaCyc: PWY-6784 RB9835 472cd191c18c3d6abbe661a4a2e95587 334 Gene3D G3DSA:3.30.70.520 178 321 1.1E-58 T 11-11-2016 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain RB9835 472cd191c18c3d6abbe661a4a2e95587 334 SUPERFAMILY SSF55112 13 168 8.37E-52 T 11-11-2016 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain RB9835 472cd191c18c3d6abbe661a4a2e95587 334 Hamap MF_00579 Formylmethanofuran--tetrahydromethanopterin formyltransferase [ftr]. 11 321 44.251 T 11-11-2016 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 RB9835 472cd191c18c3d6abbe661a4a2e95587 334 SUPERFAMILY SSF55112 169 321 1.41E-54 T 11-11-2016 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain RB9835 472cd191c18c3d6abbe661a4a2e95587 334 PIRSF PIRSF006414 11 322 4.3E-102 T 11-11-2016 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 RB9835 472cd191c18c3d6abbe661a4a2e95587 334 Gene3D G3DSA:3.30.70.520 27 177 1.3E-60 T 11-11-2016 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain RB9835 472cd191c18c3d6abbe661a4a2e95587 334 Pfam PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase 12 167 4.1E-57 T 11-11-2016 IPR022667 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal GO:0006730|GO:0016740 RB9835 472cd191c18c3d6abbe661a4a2e95587 334 Pfam PF02741 FTR, proximal lobe 170 320 5.2E-58 T 11-11-2016 IPR002770 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal GO:0006730|GO:0016740 RB9835 472cd191c18c3d6abbe661a4a2e95587 334 TIGRFAM TIGR03119 one_C_fhcD: formylmethanofuran--tetrahydromethanopterin N-formyltransferase 18 320 1.3E-138 T 11-11-2016 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 RB5008 88ce142265dd9ed4e29ec046a9bcc70a 395 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 79 301 7.7E-12 T 11-11-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 RB5008 88ce142265dd9ed4e29ec046a9bcc70a 395 SUPERFAMILY SSF51445 57 327 4.16E-40 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB5008 88ce142265dd9ed4e29ec046a9bcc70a 395 Gene3D G3DSA:3.20.20.80 54 328 4.9E-32 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB12864 c9935648de25910ef0e5bf4139505a70 397 Pfam PF00155 Aminotransferase class I and II 29 392 6.4E-87 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RB12864 c9935648de25910ef0e5bf4139505a70 397 PRINTS PR00799 Aspartate aminotransferase signature 206 218 3.3E-39 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RB12864 c9935648de25910ef0e5bf4139505a70 397 PRINTS PR00799 Aspartate aminotransferase signature 341 359 3.3E-39 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RB12864 c9935648de25910ef0e5bf4139505a70 397 PRINTS PR00799 Aspartate aminotransferase signature 175 194 3.3E-39 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RB12864 c9935648de25910ef0e5bf4139505a70 397 PRINTS PR00799 Aspartate aminotransferase signature 273 298 3.3E-39 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RB12864 c9935648de25910ef0e5bf4139505a70 397 Gene3D G3DSA:3.40.640.10 47 315 3.4E-102 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB12864 c9935648de25910ef0e5bf4139505a70 397 SUPERFAMILY SSF53383 3 396 3.61E-114 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB9923 da3cb7c07a906d97d7fbe57462142d96 212 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 185 8.5E-23 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain RB9923 da3cb7c07a906d97d7fbe57462142d96 212 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 13 182 1.5E-43 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RB9923 da3cb7c07a906d97d7fbe57462142d96 212 Gene3D G3DSA:2.40.240.10 11 98 4.7E-21 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB9923 da3cb7c07a906d97d7fbe57462142d96 212 Pfam PF01386 Ribosomal L25p family 12 95 1.5E-20 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RB9923 da3cb7c07a906d97d7fbe57462142d96 212 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 10 186 24.513 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RB9923 da3cb7c07a906d97d7fbe57462142d96 212 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 12 98 1.0E-44 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RB9923 da3cb7c07a906d97d7fbe57462142d96 212 SUPERFAMILY SSF50715 10 192 5.41E-46 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB9923 da3cb7c07a906d97d7fbe57462142d96 212 Gene3D G3DSA:2.170.120.20 101 192 4.9E-24 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain RB1477 fe31dd0721fbcd06f87d52cd8f043382 538 SUPERFAMILY SSF53649 73 524 4.71E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB1477 fe31dd0721fbcd06f87d52cd8f043382 538 ProSitePatterns PS00523 Sulfatases signature 1. 120 132 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB1477 fe31dd0721fbcd06f87d52cd8f043382 538 Pfam PF00884 Sulfatase 74 424 1.3E-66 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB1477 fe31dd0721fbcd06f87d52cd8f043382 538 Gene3D G3DSA:3.40.720.10 72 437 2.9E-107 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1477 fe31dd0721fbcd06f87d52cd8f043382 538 Gene3D G3DSA:3.30.1120.10 438 524 5.0E-17 T 11-11-2016 RB4981 8064a593602d6e67f0bbf571778bd1de 262 Gene3D G3DSA:3.40.50.720 2 257 5.0E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.1E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.1E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.1E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 SUPERFAMILY SSF51735 1 257 9.43E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.2E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.2E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.2E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 4.2E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.2E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.2E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4981 8064a593602d6e67f0bbf571778bd1de 262 Pfam PF00106 short chain dehydrogenase 8 194 2.1E-42 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7431 448c5b42b691079a886ae68f5a7bd7aa 146 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 76 107 3.0E-12 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RB7431 448c5b42b691079a886ae68f5a7bd7aa 146 Pfam PF00825 Ribonuclease P 12 131 8.6E-30 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RB7431 448c5b42b691079a886ae68f5a7bd7aa 146 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 17 131 7.5E-18 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RB7431 448c5b42b691079a886ae68f5a7bd7aa 146 SUPERFAMILY SSF54211 12 134 2.1E-23 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB7431 448c5b42b691079a886ae68f5a7bd7aa 146 Gene3D G3DSA:3.30.230.10 11 136 1.5E-30 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB7431 448c5b42b691079a886ae68f5a7bd7aa 146 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 12 134 16.799 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RB3822 343072b30284deac37a3eacf239eec89 250 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 65 248 2.8E-44 T 11-11-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 RB3822 343072b30284deac37a3eacf239eec89 250 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 29 248 30.133 T 11-11-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 RB3822 343072b30284deac37a3eacf239eec89 250 Pfam PF02666 Phosphatidylserine decarboxylase 74 244 8.8E-25 T 11-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 RB12205 f4938a14a7141d08a48ff95b1a953a78 216 Gene3D G3DSA:1.10.260.40 3 60 2.0E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB12205 f4938a14a7141d08a48ff95b1a953a78 216 SMART SM00530 7 61 0.0023 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB12205 f4938a14a7141d08a48ff95b1a953a78 216 SUPERFAMILY SSF47413 4 68 1.45E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB12205 f4938a14a7141d08a48ff95b1a953a78 216 Pfam PF01381 Helix-turn-helix 9 58 6.8E-6 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1821 2002 6.8E-50 T 11-11-2016 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SMART SM00826 960 1129 7.4E-40 T 11-11-2016 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.40.50.720 1626 1720 2.8E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF51735 1258 1465 7.72E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF00975 Thioesterase domain 2211 2465 1.1E-23 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.40.50.720 1821 2037 3.5E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF00550 Phosphopantetheine attachment site 2106 2169 3.5E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.30.70.250 717 783 1.3E-5 T 11-11-2016 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SMART SM00824 Thioesterase 2211 2468 2.0E-5 T 11-11-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF50129 1479 1625 7.86E-30 T 11-11-2016 IPR011032 GroES-like RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 52 303 2.0E-94 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF55048 716 784 1.44E-8 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF00107 Zinc-binding dehydrogenase 1631 1727 5.3E-22 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SMART SM00829 1491 1802 8.7E-170 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF00698 Acyl transferase domain 590 892 5.7E-55 T 11-11-2016 IPR014043 Acyl transferase RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:1.10.1200.10 2097 2174 7.9E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 312 428 1.3E-39 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.40.366.10 784 894 2.8E-85 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.40.366.10 582 711 2.8E-85 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.40.50.1820 2346 2466 1.3E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.40.50.1820 2199 2312 1.3E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF08659 KR domain 1822 2001 1.7E-61 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1510 1569 2.2E-5 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SMART SM00823 Phosphopantetheine attachment site 2102 2173 1.2E-11 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF53901 51 171 5.3E-98 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF53901 199 426 5.3E-98 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF51735 1819 2064 3.01E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.90.180.10 1485 1625 2.7E-46 T 11-11-2016 IPR011032 GroES-like RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF53474 2193 2466 3.81E-44 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF14765 Polyketide synthase dehydratase 960 1250 2.3E-66 T 11-11-2016 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SMART SM00825 Beta-ketoacyl synthase 54 481 2.8E-206 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.40.47.10 317 480 2.0E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF52151 785 886 1.07E-74 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF52151 587 717 1.07E-74 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 216 232 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF47336 2096 2179 1.18E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SUPERFAMILY SSF51735 1591 1751 3.18E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SMART SM01294 2103 2169 0.0021 T 11-11-2016 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 591 890 2.4E-111 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 432 552 2.9E-15 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB11975 aaa29be6159bb700632e0c532a1b4be2 2471 Gene3D G3DSA:3.40.47.10 51 315 7.6E-101 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB3338 6a565cd214faf00ff338412d57592357 384 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 24 143 1.5E-28 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB3338 6a565cd214faf00ff338412d57592357 384 SUPERFAMILY SSF55347 147 275 2.94E-16 T 11-11-2016 RB3338 6a565cd214faf00ff338412d57592357 384 Gene3D G3DSA:3.30.360.10 160 275 1.8E-27 T 11-11-2016 RB3338 6a565cd214faf00ff338412d57592357 384 Gene3D G3DSA:3.30.360.10 314 376 1.8E-27 T 11-11-2016 RB3338 6a565cd214faf00ff338412d57592357 384 SUPERFAMILY SSF51735 17 171 1.01E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3338 6a565cd214faf00ff338412d57592357 384 Gene3D G3DSA:3.40.50.720 18 159 1.4E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12337 c490540f03a8a78a7ac618e06282d5d1 759 Gene3D G3DSA:3.40.50.1820 500 759 3.8E-44 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB12337 c490540f03a8a78a7ac618e06282d5d1 759 SUPERFAMILY SSF50993 61 494 2.04E-101 T 11-11-2016 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 Pfam PF00326 Prolyl oligopeptidase family 551 759 3.6E-64 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 Gene3D G3DSA:2.130.10.120 134 491 1.6E-108 T 11-11-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 591 621 - T 11-11-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 66 485 7.3E-123 T 11-11-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 614 634 1.1E-56 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 556 580 1.1E-56 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 584 603 1.1E-56 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 669 684 1.1E-56 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 548 1.1E-56 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 688 710 1.1E-56 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RB12337 c490540f03a8a78a7ac618e06282d5d1 759 SUPERFAMILY SSF53474 498 758 8.91E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB490 ec3bcaccb19c92cd440a94b60eef59b5 447 SUPERFAMILY SSF53649 272 427 1.96E-17 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB490 ec3bcaccb19c92cd440a94b60eef59b5 447 Gene3D G3DSA:3.40.720.10 323 425 8.7E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB490 ec3bcaccb19c92cd440a94b60eef59b5 447 Pfam PF07394 Protein of unknown function (DUF1501) 46 446 3.4E-117 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF141072 1511 1621 1.2E-9 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 2105 2170 2.48E-9 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF50969 3268 3474 3.92E-11 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF63825 3662 3758 1.31E-5 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF50969 2245 2483 6.59E-13 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF63825 2634 2835 2.49E-11 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:2.60.40.10 2538 2593 1.9E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:2.60.40.10 2089 2169 1.1E-9 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:2.60.40.10 3908 3972 4.1E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:2.60.40.10 4227 4308 6.0E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:2.60.40.10 2201 2265 1.1E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:2.60.40.10 2877 2943 9.3E-11 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:2.60.40.10 3235 3301 1.2E-6 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:1.10.1330.10 4569 4629 4.1E-5 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 3544 3624 3.53E-5 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF141072 1110 1212 1.57E-16 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF50998 3919 4150 3.66E-12 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF50998 3725 3855 3.66E-12 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF50998 2972 3196 2.39E-6 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 2852 2953 2.48E-11 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF141072 1617 1751 5.62E-23 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 4231 4319 3.66E-7 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF141072 1393 1498 2.62E-16 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF141072 606 744 1.83E-10 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 801 821 0.042 T 11-11-2016 IPR013431 Delta-60 repeat RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 950 982 5.6E-4 T 11-11-2016 IPR013431 Delta-60 repeat RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 728 758 4.9E-5 T 11-11-2016 IPR013431 Delta-60 repeat RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF141072 493 607 5.75E-21 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 2177 2273 5.89E-10 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Gene3D G3DSA:2.60.40.60 4361 4439 4.5E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF03160 Calx-beta domain 1608 1711 0.0022 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF03160 Calx-beta domain 600 686 0.96 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF03160 Calx-beta domain 509 584 3.0E-6 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF03160 Calx-beta domain 1518 1592 0.017 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF03160 Calx-beta domain 1086 1181 4.5E-8 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 Pfam PF03160 Calx-beta domain 1388 1470 2.3E-7 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 781 827 7.0E-6 T 11-11-2016 IPR013431 Delta-60 repeat RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 941 988 3.0E-8 T 11-11-2016 IPR013431 Delta-60 repeat RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 726 767 7.3E-8 T 11-11-2016 IPR013431 Delta-60 repeat RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 1850 1938 9.55E-7 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 3208 3300 3.92E-11 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF63446 4567 4629 1.57E-5 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SMART SM00237 495 584 0.013 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SMART SM00237 1085 1182 0.0019 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SMART SM00237 1606 1711 0.013 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SMART SM00237 597 689 0.034 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SMART SM00237 1371 1469 0.0033 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 2531 2608 1.44E-6 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF117074 1936 2031 2.48E-6 T 11-11-2016 RB1924 f7237b38ae0b1ef853558b555a54ccce 4630 SUPERFAMILY SSF49313 4359 4428 3.0E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 216 226 - T 11-11-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 Gene3D G3DSA:3.90.550.10 27 302 1.4E-76 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 Gene3D G3DSA:3.90.550.10 348 391 1.4E-76 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 118 126 - T 11-11-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 SUPERFAMILY SSF53448 348 363 1.17E-74 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 SUPERFAMILY SSF53448 20 295 1.17E-74 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 SUPERFAMILY SSF51161 335 429 2.5E-19 T 11-11-2016 IPR011004 Trimeric LpxA-like RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 22 428 48.152 T 11-11-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 31 50 - T 11-11-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 26 401 1.0E-145 T 11-11-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB1358 098cb717cf5a1a6688e76ef582c9f34b 446 Pfam PF00483 Nucleotidyl transferase 27 291 3.8E-63 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RB8093 a2770b57f1cf6aeb686394b0e32db478 396 Gene3D G3DSA:2.60.40.360 67 168 1.0E-24 T 11-11-2016 IPR008962 PapD-like RB8093 a2770b57f1cf6aeb686394b0e32db478 396 Pfam PF07610 Protein of unknown function (DUF1573) 92 135 5.1E-12 T 11-11-2016 IPR011467 Protein of unknown function DUF1573 RB3070 b2f57a43350033cbc2ba888813926729 505 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 58 186 2.6E-19 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB3070 b2f57a43350033cbc2ba888813926729 505 SUPERFAMILY SSF51735 46 219 8.82E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3070 b2f57a43350033cbc2ba888813926729 505 Gene3D G3DSA:3.40.50.720 54 206 2.8E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3070 b2f57a43350033cbc2ba888813926729 505 Gene3D G3DSA:3.30.360.10 207 227 3.1E-16 T 11-11-2016 RB3070 b2f57a43350033cbc2ba888813926729 505 Gene3D G3DSA:3.30.360.10 265 441 3.1E-16 T 11-11-2016 RB3070 b2f57a43350033cbc2ba888813926729 505 SUPERFAMILY SSF55347 193 221 3.71E-16 T 11-11-2016 RB3070 b2f57a43350033cbc2ba888813926729 505 SUPERFAMILY SSF55347 258 408 3.71E-16 T 11-11-2016 RB3070 b2f57a43350033cbc2ba888813926729 505 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 18 49 0.0015 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RB4591 2ad8f178314056f8db5b02b9a9b8931b 276 Gene3D G3DSA:2.40.50.140 5 82 8.5E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB4591 2ad8f178314056f8db5b02b9a9b8931b 276 SUPERFAMILY SSF50249 4 79 2.23E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB4591 2ad8f178314056f8db5b02b9a9b8931b 276 SUPERFAMILY SSF57863 86 208 2.04E-26 T 11-11-2016 RB4591 2ad8f178314056f8db5b02b9a9b8931b 276 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 187 9.3E-30 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RB4591 2ad8f178314056f8db5b02b9a9b8931b 276 Hamap MF_00201 DNA repair protein RecO [recO]. 2 272 23.79 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RB4591 2ad8f178314056f8db5b02b9a9b8931b 276 Pfam PF11967 Recombination protein O N terminal 1 79 2.0E-17 T 11-11-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal RB4591 2ad8f178314056f8db5b02b9a9b8931b 276 Pfam PF02565 Recombination protein O C terminal 87 207 1.1E-17 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 7528 7590 2.6E-6 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 6252 6350 1.2E-14 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 6497 6591 2.5E-6 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 7365 7465 1.0E-9 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 2206 2230 130.0 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 7304 7341 9.3E-4 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 1342 1450 9.3E-6 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 1267 1315 9.5 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 5188 5283 4.0E-13 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 5660 5755 1.1E-9 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 6397 6474 5.7E-4 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 6628 6712 7.3E-4 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 4539 4639 2.8E-13 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 6737 6836 2.1E-11 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 4422 4517 5.9E-7 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 2762 2864 1.3E-4 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 6133 6234 8.2E-15 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 4821 4934 0.062 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 7662 7717 70.0 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 4955 5052 5.1E-17 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 5773 5868 1.0E-10 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 5072 5167 5.9E-10 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 2895 2999 1.0E-5 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 5546 5640 9.2E-10 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 5426 5523 2.8E-13 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 2374 2396 110.0 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 5942 5985 1.1 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 6043 6105 5.4E-6 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 5304 5403 6.5E-14 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF03160 Calx-beta domain 4674 4743 5.2 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 5083 5198 2.35E-17 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 1351 1484 1.7E-11 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 5314 5433 2.62E-23 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 4428 4544 1.23E-14 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF63829 188 410 8.5E-15 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Pfam PF00028 Cadherin domain 7754 7844 1.2E-9 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 6144 6261 3.92E-22 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 4542 4681 1.57E-24 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 5999 6106 0.037 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 7502 7591 0.017 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 6251 6351 4.4E-10 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 5543 5641 6.5E-4 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 5771 5869 3.2E-7 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 6736 6836 4.4E-8 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 5423 5523 0.05 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 5303 5403 4.8E-12 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 4421 4518 0.0083 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 1341 1453 0.25 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 6495 6592 0.0093 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 5071 5167 5.5E-5 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 6373 6474 0.088 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 4536 4639 1.5E-14 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 5657 5755 6.5E-8 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 5187 5283 4.0E-12 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 4954 5053 2.8E-12 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 6132 6235 1.1E-13 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 7365 7467 0.02 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00237 6608 6712 0.01 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SMART SM00112 7772 7852 5.4E-14 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 6262 6380 5.1E-21 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 5668 5782 3.92E-23 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 2790 2902 3.14E-11 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 7517 7619 4.19E-15 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 7370 7496 5.23E-15 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 5910 6010 7.72E-10 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 2930 3043 1.57E-9 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 2373 2428 7.19E-6 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 6633 6744 1.31E-16 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 7252 7372 2.49E-14 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 6387 6504 1.44E-14 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 6506 6623 8.89E-17 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 6044 6140 8.11E-11 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 6742 6848 2.35E-17 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 5199 5313 3.79E-20 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 5782 5899 1.44E-22 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 7660 7750 6.8E-7 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 Gene3D G3DSA:2.60.40.60 7755 7846 2.5E-15 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 4832 4963 3.14E-7 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 5554 5667 5.62E-22 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF49313 7744 7847 2.71E-15 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 4965 5082 2.22E-21 T 11-11-2016 RB11769 3c18aef64e0a8d4844ff19478ce6c035 8173 SUPERFAMILY SSF141072 5431 5553 2.49E-23 T 11-11-2016 RB3614 0ecdda4fcda1754c76703438c42b7af7 488 Gene3D G3DSA:1.10.10.60 434 482 2.5E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3614 0ecdda4fcda1754c76703438c42b7af7 488 Gene3D G3DSA:3.40.50.300 171 344 1.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3614 0ecdda4fcda1754c76703438c42b7af7 488 SUPERFAMILY SSF52540 171 414 1.98E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3614 0ecdda4fcda1754c76703438c42b7af7 488 Gene3D G3DSA:3.40.50.2300 22 146 9.6E-34 T 11-11-2016 RB3614 0ecdda4fcda1754c76703438c42b7af7 488 SUPERFAMILY SSF46689 384 481 5.82E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3614 0ecdda4fcda1754c76703438c42b7af7 488 SUPERFAMILY SSF52172 22 216 1.57E-39 T 11-11-2016 IPR011006 CheY-like superfamily RB3614 0ecdda4fcda1754c76703438c42b7af7 488 SMART SM00382 192 335 2.7E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3614 0ecdda4fcda1754c76703438c42b7af7 488 Pfam PF00158 Sigma-54 interaction domain 172 339 3.4E-63 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB3614 0ecdda4fcda1754c76703438c42b7af7 488 Pfam PF00072 Response regulator receiver domain 24 134 2.5E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3614 0ecdda4fcda1754c76703438c42b7af7 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 196 209 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB3614 0ecdda4fcda1754c76703438c42b7af7 488 Gene3D G3DSA:1.10.8.60 345 419 9.4E-21 T 11-11-2016 RB3614 0ecdda4fcda1754c76703438c42b7af7 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 384 393 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB3614 0ecdda4fcda1754c76703438c42b7af7 488 SMART SM00448 22 133 2.3E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB9570 1d6a87492236bcbe00bee2079ec1c099 547 Gene3D G3DSA:1.10.8.60 404 455 1.1E-21 T 11-11-2016 RB9570 1d6a87492236bcbe00bee2079ec1c099 547 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 255 268 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB9570 1d6a87492236bcbe00bee2079ec1c099 547 SUPERFAMILY SSF52540 230 463 2.08E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9570 1d6a87492236bcbe00bee2079ec1c099 547 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 444 453 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB9570 1d6a87492236bcbe00bee2079ec1c099 547 SMART SM00065 36 206 2.4E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB9570 1d6a87492236bcbe00bee2079ec1c099 547 SUPERFAMILY SSF46689 444 544 7.62E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9570 1d6a87492236bcbe00bee2079ec1c099 547 Gene3D G3DSA:1.10.10.60 456 544 5.6E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9570 1d6a87492236bcbe00bee2079ec1c099 547 SMART SM00382 251 394 4.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9570 1d6a87492236bcbe00bee2079ec1c099 547 SUPERFAMILY SSF55781 37 208 1.13E-17 T 11-11-2016 IPR029016 GAF domain-like RB9570 1d6a87492236bcbe00bee2079ec1c099 547 Gene3D G3DSA:3.40.50.300 228 403 1.9E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9570 1d6a87492236bcbe00bee2079ec1c099 547 Gene3D G3DSA:3.30.450.40 26 199 3.6E-34 T 11-11-2016 IPR029016 GAF domain-like RB9570 1d6a87492236bcbe00bee2079ec1c099 547 Pfam PF13185 GAF domain 35 197 1.4E-11 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB9570 1d6a87492236bcbe00bee2079ec1c099 547 Pfam PF00158 Sigma-54 interaction domain 231 397 2.1E-70 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB9570 1d6a87492236bcbe00bee2079ec1c099 547 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 317 332 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB11043 e29d1855b9d6a03bd0452c9885616f30 337 SUPERFAMILY SSF47473 82 128 3.28E-7 T 11-11-2016 IPR011992 EF-hand domain pair RB11043 e29d1855b9d6a03bd0452c9885616f30 337 Gene3D G3DSA:1.10.238.10 85 134 1.8E-6 T 11-11-2016 IPR011992 EF-hand domain pair RB11043 e29d1855b9d6a03bd0452c9885616f30 337 ProSitePatterns PS00018 EF-hand calcium-binding domain. 112 124 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB11043 e29d1855b9d6a03bd0452c9885616f30 337 ProSitePatterns PS00018 EF-hand calcium-binding domain. 87 99 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB2731 66369f3825744ef233c3679c5fc212c3 498 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 276 291 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB2731 66369f3825744ef233c3679c5fc212c3 498 Gene3D G3DSA:1.10.10.60 448 489 2.0E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB2731 66369f3825744ef233c3679c5fc212c3 498 Gene3D G3DSA:3.40.50.300 188 362 1.0E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2731 66369f3825744ef233c3679c5fc212c3 498 SUPERFAMILY SSF52172 48 233 3.13E-38 T 11-11-2016 IPR011006 CheY-like superfamily RB2731 66369f3825744ef233c3679c5fc212c3 498 Gene3D G3DSA:1.10.8.60 363 437 2.4E-21 T 11-11-2016 RB2731 66369f3825744ef233c3679c5fc212c3 498 Gene3D G3DSA:3.40.50.2300 49 178 8.4E-33 T 11-11-2016 RB2731 66369f3825744ef233c3679c5fc212c3 498 SUPERFAMILY SSF52540 189 432 1.16E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2731 66369f3825744ef233c3679c5fc212c3 498 Pfam PF00072 Response regulator receiver domain 52 158 1.6E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2731 66369f3825744ef233c3679c5fc212c3 498 SMART SM00382 210 353 3.7E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB2731 66369f3825744ef233c3679c5fc212c3 498 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 402 411 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB2731 66369f3825744ef233c3679c5fc212c3 498 Pfam PF02954 Bacterial regulatory protein, Fis family 451 489 5.4E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB2731 66369f3825744ef233c3679c5fc212c3 498 SUPERFAMILY SSF46689 401 489 9.32E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB2731 66369f3825744ef233c3679c5fc212c3 498 SMART SM00448 50 161 4.4E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2731 66369f3825744ef233c3679c5fc212c3 498 Pfam PF00158 Sigma-54 interaction domain 190 356 3.4E-70 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB6292 b1c0e6c5ca663e38deeaf1f7ab4ed70a 272 Gene3D G3DSA:3.20.20.70 29 259 4.0E-18 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6292 b1c0e6c5ca663e38deeaf1f7ab4ed70a 272 SUPERFAMILY SSF51366 29 260 2.15E-18 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB6292 b1c0e6c5ca663e38deeaf1f7ab4ed70a 272 Pfam PF00977 Histidine biosynthesis protein 29 261 1.6E-45 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 RB10045 c36bddc5304e0d273c7183f680656533 436 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 32 52 2.8E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB10045 c36bddc5304e0d273c7183f680656533 436 Pfam PF07596 Protein of unknown function (DUF1559) 57 398 2.2E-61 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB10045 c36bddc5304e0d273c7183f680656533 436 Pfam PF13633 Prokaryotic N-terminal methylation site 32 56 1.4E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB10045 c36bddc5304e0d273c7183f680656533 436 SUPERFAMILY SSF54523 33 190 5.96E-26 T 11-11-2016 RB10045 c36bddc5304e0d273c7183f680656533 436 Gene3D G3DSA:3.30.700.10 33 91 2.8E-6 T 11-11-2016 RB6126 3ef7e6a777b49c24da800d5431f949af 427 Gene3D G3DSA:3.40.140.10 49 173 1.7E-26 T 11-11-2016 RB6126 3ef7e6a777b49c24da800d5431f949af 427 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 51 144 1.2E-14 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RB6126 3ef7e6a777b49c24da800d5431f949af 427 SUPERFAMILY SSF53927 49 190 3.44E-39 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 RB6126 3ef7e6a777b49c24da800d5431f949af 427 Gene3D G3DSA:3.40.430.10 174 427 5.2E-63 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RB6126 3ef7e6a777b49c24da800d5431f949af 427 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 53 422 1.0E-92 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 RB6126 3ef7e6a777b49c24da800d5431f949af 427 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 191 426 1.4E-44 T 11-11-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 RB6126 3ef7e6a777b49c24da800d5431f949af 427 Pfam PF01872 RibD C-terminal domain 192 421 1.2E-37 T 11-11-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RB6126 3ef7e6a777b49c24da800d5431f949af 427 SUPERFAMILY SSF53597 189 426 2.49E-46 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 Gene3D G3DSA:2.60.40.10 63 119 7.0E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 Gene3D G3DSA:2.60.40.10 1388 1448 1.5E-13 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 SUPERFAMILY SSF117074 46 147 6.67E-10 T 11-11-2016 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 SUPERFAMILY SSF117074 1357 1485 6.54E-18 T 11-11-2016 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 Pfam PF05738 Cna protein B-type domain 1419 1455 5.9E-7 T 11-11-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 Pfam PF01345 Domain of unknown function DUF11 869 909 1.1E-6 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 Pfam PF01345 Domain of unknown function DUF11 1239 1309 2.6E-14 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 Pfam PF01345 Domain of unknown function DUF11 689 757 2.7E-12 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 870 914 5.7E-10 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1263 1309 1.3E-14 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 576 609 2.1E-6 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 991 1041 5.2E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1159 1182 0.001 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB9053 80dfcf446b423e3f754dedad3e0848fb 1521 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 711 762 9.5E-15 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB299 01d9c8f7f2e0a356ac3bccdd88837b7f 422 Gene3D G3DSA:2.30.42.10 339 420 3.4E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB299 01d9c8f7f2e0a356ac3bccdd88837b7f 422 SUPERFAMILY SSF50156 335 415 1.28E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB299 01d9c8f7f2e0a356ac3bccdd88837b7f 422 SUPERFAMILY SSF52047 244 337 9.68E-5 T 11-11-2016 RB299 01d9c8f7f2e0a356ac3bccdd88837b7f 422 SMART SM00228 336 406 2.4E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB299 01d9c8f7f2e0a356ac3bccdd88837b7f 422 Gene3D G3DSA:1.25.10.10 56 154 0.001 T 11-11-2016 IPR011989 Armadillo-like helical RB299 01d9c8f7f2e0a356ac3bccdd88837b7f 422 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 334 401 2.1E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB299 01d9c8f7f2e0a356ac3bccdd88837b7f 422 Gene3D G3DSA:3.80.10.10 216 329 2.7E-6 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB7294 868962ada1d40b135aa31baebd7067bc 282 Gene3D G3DSA:3.40.50.720 17 263 7.6E-78 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7294 868962ada1d40b135aa31baebd7067bc 282 SUPERFAMILY SSF51735 19 263 4.0E-76 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7294 868962ada1d40b135aa31baebd7067bc 282 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 262 5.2E-61 T 11-11-2016 RB7294 868962ada1d40b135aa31baebd7067bc 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 1.7E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7294 868962ada1d40b135aa31baebd7067bc 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 1.7E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7294 868962ada1d40b135aa31baebd7067bc 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 1.7E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7294 868962ada1d40b135aa31baebd7067bc 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 1.7E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7294 868962ada1d40b135aa31baebd7067bc 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 1.7E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7294 868962ada1d40b135aa31baebd7067bc 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 1.7E-26 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11859 0cc230091e8b4d177416111adb5f5db3 283 Gene3D G3DSA:3.60.15.10 24 278 1.1E-74 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11859 0cc230091e8b4d177416111adb5f5db3 283 Pfam PF12706 Beta-lactamase superfamily domain 68 250 2.3E-39 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11859 0cc230091e8b4d177416111adb5f5db3 283 SMART SM00849 56 253 8.1E-6 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11859 0cc230091e8b4d177416111adb5f5db3 283 SUPERFAMILY SSF56281 24 279 3.54E-46 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB7692 be28dcc1cbbdba55dd20f147cbdba439 420 SUPERFAMILY SSF48695 72 101 1.09E-28 T 11-11-2016 IPR011031 Multihaem cytochrome RB7692 be28dcc1cbbdba55dd20f147cbdba439 420 SUPERFAMILY SSF48695 168 407 1.09E-28 T 11-11-2016 IPR011031 Multihaem cytochrome RB7692 be28dcc1cbbdba55dd20f147cbdba439 420 Gene3D G3DSA:1.10.710.10 221 386 4.9E-22 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB7692 be28dcc1cbbdba55dd20f147cbdba439 420 Gene3D G3DSA:1.10.710.10 71 114 4.9E-22 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB7692 be28dcc1cbbdba55dd20f147cbdba439 420 Pfam PF13435 Cytochrome c554 and c-prime 226 264 3.0E-5 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB1286 96d0a8361a1990cadb014f214175328b 401 Pfam PF13808 DDE_Tnp_1-associated 23 108 5.0E-30 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal RB1286 96d0a8361a1990cadb014f214175328b 401 Pfam PF01609 Transposase DDE domain 133 364 3.1E-13 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB10823 0c58f9452e5d6b6d6d6a6448ae82223e 258 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 92 237 4.7E-15 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB10823 0c58f9452e5d6b6d6d6a6448ae82223e 258 SUPERFAMILY SSF52266 47 247 2.82E-35 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB10823 0c58f9452e5d6b6d6d6a6448ae82223e 258 Gene3D G3DSA:3.40.50.1110 50 251 9.4E-32 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6482 e6d69383c67e1a8754627967c767a24f 256 SUPERFAMILY SSF55120 29 247 1.92E-53 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB6482 e6d69383c67e1a8754627967c767a24f 256 Pfam PF00849 RNA pseudouridylate synthase 37 194 4.9E-27 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB10129 78c01f1a3b8db574bcf1e482c07a0965 238 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 22 140 2.2E-22 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 RB10129 78c01f1a3b8db574bcf1e482c07a0965 238 Gene3D G3DSA:1.10.287.460 30 119 1.6E-20 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 RB10129 78c01f1a3b8db574bcf1e482c07a0965 238 Gene3D G3DSA:3.10.50.40 120 237 5.0E-53 T 11-11-2016 RB10129 78c01f1a3b8db574bcf1e482c07a0965 238 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 149 235 1.6E-30 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RB10129 78c01f1a3b8db574bcf1e482c07a0965 238 SUPERFAMILY SSF54534 33 237 1.18E-57 T 11-11-2016 RB1883 33dde6dc833e6056e85b1198018f8f01 616 Pfam PF13401 AAA domain 45 176 2.6E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1883 33dde6dc833e6056e85b1198018f8f01 616 SUPERFAMILY SSF52540 24 268 7.63E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1883 33dde6dc833e6056e85b1198018f8f01 616 Gene3D G3DSA:3.40.50.300 27 182 5.4E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1883 33dde6dc833e6056e85b1198018f8f01 616 SMART SM00382 42 182 0.0023 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1883 33dde6dc833e6056e85b1198018f8f01 616 Gene3D G3DSA:1.10.8.60 220 272 1.1E-4 T 11-11-2016 RB11203 3bb665874f357744833552e3023a7577 582 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 556 7.1E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11203 3bb665874f357744833552e3023a7577 582 Gene3D G3DSA:1.10.287.130 334 400 2.1E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11203 3bb665874f357744833552e3023a7577 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 2.9E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11203 3bb665874f357744833552e3023a7577 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 498 2.9E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11203 3bb665874f357744833552e3023a7577 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 2.9E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11203 3bb665874f357744833552e3023a7577 582 SUPERFAMILY SSF55785 214 324 1.27E-13 T 11-11-2016 IPR000014 PAS domain RB11203 3bb665874f357744833552e3023a7577 582 Pfam PF08447 PAS fold 229 317 2.6E-11 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB11203 3bb665874f357744833552e3023a7577 582 SMART SM00387 445 557 2.3E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11203 3bb665874f357744833552e3023a7577 582 SUPERFAMILY SSF47384 326 404 6.08E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11203 3bb665874f357744833552e3023a7577 582 Gene3D G3DSA:3.30.450.20 214 333 2.3E-18 T 11-11-2016 RB11203 3bb665874f357744833552e3023a7577 582 Pfam PF00512 His Kinase A (phospho-acceptor) domain 337 402 4.7E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11203 3bb665874f357744833552e3023a7577 582 SUPERFAMILY SSF55874 393 555 2.36E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11203 3bb665874f357744833552e3023a7577 582 SMART SM00388 336 404 1.2E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11203 3bb665874f357744833552e3023a7577 582 Gene3D G3DSA:3.30.565.10 403 561 6.8E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9922 14085a2a19b391e4215aac00ee259755 190 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 186 7.3E-60 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RB9922 14085a2a19b391e4215aac00ee259755 190 Pfam PF01195 Peptidyl-tRNA hydrolase 3 184 3.0E-57 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RB9922 14085a2a19b391e4215aac00ee259755 190 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 34.103 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RB9922 14085a2a19b391e4215aac00ee259755 190 SUPERFAMILY SSF53178 2 185 5.49E-67 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RB9922 14085a2a19b391e4215aac00ee259755 190 Gene3D G3DSA:3.40.50.1470 2 186 1.5E-71 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RB9922 14085a2a19b391e4215aac00ee259755 190 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 Gene3D G3DSA:1.10.1060.10 682 778 2.9E-13 T 11-11-2016 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 SUPERFAMILY SSF56176 278 323 1.19E-52 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 SUPERFAMILY SSF56176 42 236 1.19E-52 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 SUPERFAMILY SSF55103 327 572 5.23E-39 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 Gene3D G3DSA:3.30.43.10 40 131 4.4E-22 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 Pfam PF13534 4Fe-4S dicluster domain 686 762 6.3E-8 T 11-11-2016 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 Gene3D G3DSA:3.30.465.10 284 323 6.3E-23 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 Gene3D G3DSA:3.30.465.10 137 220 6.3E-23 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 Pfam PF02913 FAD linked oxidases, C-terminal domain 322 570 6.6E-39 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 SUPERFAMILY SSF46548 670 777 2.09E-11 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 Pfam PF02754 Cysteine-rich domain 990 1072 0.024 T 11-11-2016 IPR004017 Cysteine-rich domain RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 Pfam PF01565 FAD binding domain 77 214 4.8E-40 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RB5701 14879b404f27acffaf5b39b1ab1b3b2b 1111 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 748 759 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB7198 ad414a139a1879ce3666d19460d8da24 134 SUPERFAMILY SSF46785 12 130 1.59E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7198 ad414a139a1879ce3666d19460d8da24 134 PIRSF PIRSF019455 6 134 9.2E-23 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB7198 ad414a139a1879ce3666d19460d8da24 134 Gene3D G3DSA:1.10.10.10 13 82 5.4E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7198 ad414a139a1879ce3666d19460d8da24 134 Pfam PF03965 Penicillinase repressor 14 128 3.1E-31 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB641 d1a9002c40609a83733db97c3b975b99 1170 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 909 1019 1.7E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00387 908 1021 7.2E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF55785 173 282 9.83E-17 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF55874 851 1025 6.16E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB641 d1a9002c40609a83733db97c3b975b99 1170 Pfam PF08447 PAS fold 459 521 4.6E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB641 d1a9002c40609a83733db97c3b975b99 1170 Pfam PF08447 PAS fold 189 274 3.5E-14 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB641 d1a9002c40609a83733db97c3b975b99 1170 Pfam PF08447 PAS fold 696 779 4.2E-17 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF55785 402 527 8.2E-17 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 Pfam PF08448 PAS fold 298 407 1.6E-9 T 11-11-2016 IPR013656 PAS fold-4 RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:3.40.50.2300 1037 1151 1.2E-28 T 11-11-2016 RB641 d1a9002c40609a83733db97c3b975b99 1170 Pfam PF00072 Response regulator receiver domain 1042 1151 3.6E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB641 d1a9002c40609a83733db97c3b975b99 1170 Pfam PF00072 Response regulator receiver domain 28 141 4.3E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF52172 19 159 3.13E-16 T 11-11-2016 IPR011006 CheY-like superfamily RB641 d1a9002c40609a83733db97c3b975b99 1170 PRINTS PR00344 Bacterial sensor protein C-terminal signature 945 959 2.3E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB641 d1a9002c40609a83733db97c3b975b99 1170 PRINTS PR00344 Bacterial sensor protein C-terminal signature 963 973 2.3E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB641 d1a9002c40609a83733db97c3b975b99 1170 PRINTS PR00344 Bacterial sensor protein C-terminal signature 980 998 2.3E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB641 d1a9002c40609a83733db97c3b975b99 1170 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1005 1018 2.3E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:3.30.450.20 400 535 2.4E-22 T 11-11-2016 RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:3.30.565.10 849 1024 1.0E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00388 798 862 1.9E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:3.30.450.20 278 399 8.6E-20 T 11-11-2016 RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:3.30.450.20 536 656 1.1E-10 T 11-11-2016 RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00448 26 141 0.014 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00448 1040 1154 2.3E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00086 487 529 5.7E-7 T 11-11-2016 IPR001610 PAC motif RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00086 237 280 7.8E-7 T 11-11-2016 IPR001610 PAC motif RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00086 743 785 2.3E-6 T 11-11-2016 IPR001610 PAC motif RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00086 364 405 10.0 T 11-11-2016 IPR001610 PAC motif RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:3.30.450.20 661 782 2.9E-31 T 11-11-2016 RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:3.30.450.20 158 277 5.6E-20 T 11-11-2016 RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF55785 526 657 4.01E-11 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:3.40.50.2300 20 153 8.5E-16 T 11-11-2016 RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF55785 657 782 4.36E-26 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF47384 784 862 5.1E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB641 d1a9002c40609a83733db97c3b975b99 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 177 286 5.2E-12 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 667 791 4.0E-14 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 457 534 4.0E-9 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 411 5.4E-12 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00091 541 606 0.67 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00091 292 359 0.035 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00091 163 231 0.071 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SMART SM00091 671 737 0.007 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF52172 1039 1155 5.27E-28 T 11-11-2016 IPR011006 CheY-like superfamily RB641 d1a9002c40609a83733db97c3b975b99 1170 SUPERFAMILY SSF55785 277 403 5.96E-19 T 11-11-2016 IPR000014 PAS domain RB641 d1a9002c40609a83733db97c3b975b99 1170 Pfam PF00512 His Kinase A (phospho-acceptor) domain 799 860 1.4E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB641 d1a9002c40609a83733db97c3b975b99 1170 Gene3D G3DSA:1.10.287.130 792 848 2.3E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 SUPERFAMILY SSF52540 169 415 1.18E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4487 340e2676b6d66355814fa77bed5dbc8b 514 SUPERFAMILY SSF52172 27 213 1.21E-37 T 11-11-2016 IPR011006 CheY-like superfamily RB4487 340e2676b6d66355814fa77bed5dbc8b 514 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 468 485 6.7E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 485 505 6.7E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 SMART SM00382 189 340 6.2E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB4487 340e2676b6d66355814fa77bed5dbc8b 514 SMART SM00448 29 139 5.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 Gene3D G3DSA:1.10.10.60 438 504 2.8E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 Pfam PF00158 Sigma-54 interaction domain 170 336 1.4E-67 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 Gene3D G3DSA:3.40.50.2300 27 148 1.1E-31 T 11-11-2016 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 193 206 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 Pfam PF02954 Bacterial regulatory protein, Fis family 463 501 7.2E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 Gene3D G3DSA:3.40.50.300 168 341 2.5E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4487 340e2676b6d66355814fa77bed5dbc8b 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 383 392 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB4487 340e2676b6d66355814fa77bed5dbc8b 514 Pfam PF00072 Response regulator receiver domain 32 139 2.7E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 SUPERFAMILY SSF46689 438 504 7.89E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4487 340e2676b6d66355814fa77bed5dbc8b 514 Gene3D G3DSA:1.10.8.60 342 418 5.6E-19 T 11-11-2016 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 SUPERFAMILY SSF47384 416 497 2.16E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 Gene3D G3DSA:1.10.287.130 422 484 4.6E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 Gene3D G3DSA:3.30.565.10 485 648 9.5E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2728 a7bf844ee1123b85fbd6be270ef68474 673 Pfam PF00672 HAMP domain 319 386 1.6E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 Pfam PF00512 His Kinase A (phospho-acceptor) domain 421 498 5.5E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 SMART SM00387 540 649 5.4E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2728 a7bf844ee1123b85fbd6be270ef68474 673 SMART SM00304 338 390 3.8E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 591 7.6E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 605 7.6E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 626 7.6E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 646 7.6E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 SUPERFAMILY SSF158472 339 388 1.28E-5 T 11-11-2016 RB2728 a7bf844ee1123b85fbd6be270ef68474 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 647 5.8E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2728 a7bf844ee1123b85fbd6be270ef68474 673 SUPERFAMILY SSF55874 489 648 2.88E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2728 a7bf844ee1123b85fbd6be270ef68474 673 SMART SM00388 418 499 2.0E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 SUPERFAMILY SSF52200 148 241 2.49E-14 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 SUPERFAMILY SSF48452 857 1050 8.85E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Gene3D G3DSA:3.40.50.10140 152 240 4.0E-12 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Gene3D G3DSA:1.25.40.10 769 873 1.9E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Gene3D G3DSA:1.25.40.10 874 1056 6.4E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Pfam PF13181 Tetratricopeptide repeat 1026 1049 0.039 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 SUPERFAMILY SSF55811 17 127 1.3E-12 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Pfam PF13432 Tetratricopeptide repeat 858 924 0.0015 T 11-11-2016 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Gene3D G3DSA:3.90.79.10 4 151 3.3E-13 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Gene3D G3DSA:3.40.50.300 335 453 3.8E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Pfam PF00931 NB-ARC domain 343 507 6.4E-6 T 11-11-2016 IPR002182 NB-ARC GO:0043531 Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-6803207 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 SUPERFAMILY SSF52540 330 509 6.58E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Pfam PF00293 NUDIX domain 18 124 4.0E-7 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 SMART SM00028 813 846 9.6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 SMART SM00028 895 928 250.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 SMART SM00028 1021 1054 14.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 Pfam PF13676 TIR domain 154 246 9.5E-11 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB11321 990cf7d7516bd08a0c2669df78afc511 1146 SUPERFAMILY SSF48452 763 843 1.19E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4788 c861d6ba8e6bf2085a22fdfa617c8993 167 SUPERFAMILY SSF48403 13 152 4.26E-18 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB4788 c861d6ba8e6bf2085a22fdfa617c8993 167 Pfam PF12796 Ankyrin repeats (3 copies) 41 132 3.2E-7 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB4788 c861d6ba8e6bf2085a22fdfa617c8993 167 Gene3D G3DSA:1.25.40.20 13 153 6.2E-18 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB4788 c861d6ba8e6bf2085a22fdfa617c8993 167 SMART SM00248 33 63 2200.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB4788 c861d6ba8e6bf2085a22fdfa617c8993 167 SMART SM00248 101 130 100.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB4788 c861d6ba8e6bf2085a22fdfa617c8993 167 SMART SM00248 68 97 0.12 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB1527 3fbf042ef81b6e4142bf67094a0db3aa 259 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 86 245 9.9E-28 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB1527 3fbf042ef81b6e4142bf67094a0db3aa 259 SUPERFAMILY SSF52266 61 256 2.11E-51 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB1527 3fbf042ef81b6e4142bf67094a0db3aa 259 Gene3D G3DSA:3.40.50.1110 64 257 1.9E-54 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB12514 b08415dc1a7e4df1e804af7941b4d955 164 Pfam PF03963 Flagellar hook capping protein - N-terminal region 28 94 1.3E-16 T 11-11-2016 IPR005648 Flagellar hook capping protein RB486 ca62d39a1d45df9cba50ba2b860bad0c 227 Gene3D G3DSA:1.10.10.10 120 183 1.1E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB486 ca62d39a1d45df9cba50ba2b860bad0c 227 SUPERFAMILY SSF88946 8 113 3.73E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB486 ca62d39a1d45df9cba50ba2b860bad0c 227 Pfam PF08281 Sigma-70, region 4 124 177 4.7E-12 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB486 ca62d39a1d45df9cba50ba2b860bad0c 227 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 181 9.1E-24 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB486 ca62d39a1d45df9cba50ba2b860bad0c 227 Pfam PF04542 Sigma-70 region 2 31 94 1.6E-8 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB486 ca62d39a1d45df9cba50ba2b860bad0c 227 SUPERFAMILY SSF88659 114 182 4.11E-13 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB486 ca62d39a1d45df9cba50ba2b860bad0c 227 Gene3D G3DSA:1.10.1740.10 7 119 2.9E-14 T 11-11-2016 RB9664 e9cff7d12bcdae23eb456b7e5c38cc4f 764 SMART SM00327 342 517 2.6E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9664 e9cff7d12bcdae23eb456b7e5c38cc4f 764 Pfam PF08487 Vault protein inter-alpha-trypsin domain 74 184 2.7E-36 T 11-11-2016 IPR013694 VIT domain RB9664 e9cff7d12bcdae23eb456b7e5c38cc4f 764 SUPERFAMILY SSF53300 342 512 1.13E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9664 e9cff7d12bcdae23eb456b7e5c38cc4f 764 Pfam PF13768 von Willebrand factor type A domain 344 495 3.6E-18 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9664 e9cff7d12bcdae23eb456b7e5c38cc4f 764 SMART SM00609 61 186 4.2E-13 T 11-11-2016 IPR013694 VIT domain RB9664 e9cff7d12bcdae23eb456b7e5c38cc4f 764 Gene3D G3DSA:3.40.50.410 341 512 2.4E-14 T 11-11-2016 IPR002035 von Willebrand factor, type A RB11269 671b8e4086880f91860f5de304920f1e 281 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 197 270 4.9E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11269 671b8e4086880f91860f5de304920f1e 281 SUPERFAMILY SSF46626 186 278 7.03E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11269 671b8e4086880f91860f5de304920f1e 281 Gene3D G3DSA:1.10.760.10 58 166 8.5E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11269 671b8e4086880f91860f5de304920f1e 281 Gene3D G3DSA:1.10.760.10 167 210 1.0E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11269 671b8e4086880f91860f5de304920f1e 281 Gene3D G3DSA:1.10.760.10 211 276 8.9E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11269 671b8e4086880f91860f5de304920f1e 281 SUPERFAMILY SSF46626 64 175 2.54E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9486 bd21c16651efab5202e8f9377da5114b 174 Gene3D G3DSA:1.10.10.10 21 159 4.3E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9486 bd21c16651efab5202e8f9377da5114b 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 2.1E-6 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB9486 bd21c16651efab5202e8f9377da5114b 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 2.1E-6 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB9486 bd21c16651efab5202e8f9377da5114b 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 2.1E-6 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB9486 bd21c16651efab5202e8f9377da5114b 174 SMART SM00347 42 143 2.0E-26 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB9486 bd21c16651efab5202e8f9377da5114b 174 Pfam PF01047 MarR family 50 108 9.5E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB9486 bd21c16651efab5202e8f9377da5114b 174 SUPERFAMILY SSF46785 21 161 1.46E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9572 31d70c0d5d390bdb0bb578b050862162 834 SUPERFAMILY SSF46626 807 830 2.96E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9572 31d70c0d5d390bdb0bb578b050862162 834 SUPERFAMILY SSF46626 690 770 2.96E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9572 31d70c0d5d390bdb0bb578b050862162 834 SUPERFAMILY SSF48371 402 655 9.36E-9 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB9572 31d70c0d5d390bdb0bb578b050862162 834 Pfam PF00034 Cytochrome c 698 829 3.8E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9572 31d70c0d5d390bdb0bb578b050862162 834 Gene3D G3DSA:2.120.10.30 19 391 1.2E-30 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9572 31d70c0d5d390bdb0bb578b050862162 834 SUPERFAMILY SSF50952 49 396 4.84E-19 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB9572 31d70c0d5d390bdb0bb578b050862162 834 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 694 829 2.5E-26 T 11-11-2016 IPR013427 Haem-binding domain, putative RB9572 31d70c0d5d390bdb0bb578b050862162 834 Gene3D G3DSA:1.25.10.10 473 660 1.5E-8 T 11-11-2016 IPR011989 Armadillo-like helical RB9572 31d70c0d5d390bdb0bb578b050862162 834 Gene3D G3DSA:1.25.10.10 403 433 1.5E-8 T 11-11-2016 IPR011989 Armadillo-like helical RB9572 31d70c0d5d390bdb0bb578b050862162 834 Gene3D G3DSA:1.10.760.10 795 830 3.4E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9572 31d70c0d5d390bdb0bb578b050862162 834 Gene3D G3DSA:1.10.760.10 690 761 3.4E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9572 31d70c0d5d390bdb0bb578b050862162 834 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 50 391 1.9E-54 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB2154 e14b41837c5877bd301fce1560e73296 415 Pfam PF13197 Protein of unknown function (DUF4013) 201 301 2.0E-7 T 11-11-2016 IPR025098 Protein of unknown function DUF4013 RB3240 b40d788399e0ffc4605dd58e08c4f074 199 Gene3D G3DSA:3.10.50.40 88 198 1.5E-37 T 11-11-2016 RB3240 b40d788399e0ffc4605dd58e08c4f074 199 SUPERFAMILY SSF54534 88 198 3.34E-38 T 11-11-2016 RB3240 b40d788399e0ffc4605dd58e08c4f074 199 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 110 195 5.0E-22 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RB6377 ec9b2118183fc7f185587eab3d380034 681 SUPERFAMILY SSF53448 89 376 2.49E-23 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6377 ec9b2118183fc7f185587eab3d380034 681 Pfam PF13632 Glycosyl transferase family group 2 189 384 9.6E-17 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB9643 95c45c870e08dac2bcd17431d0bd3c91 420 Gene3D G3DSA:2.40.50.100 93 110 8.1E-11 T 11-11-2016 RB9643 95c45c870e08dac2bcd17431d0bd3c91 420 Gene3D G3DSA:2.40.50.100 197 226 8.1E-11 T 11-11-2016 RB9643 95c45c870e08dac2bcd17431d0bd3c91 420 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 330 3.2E-40 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB9643 95c45c870e08dac2bcd17431d0bd3c91 420 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 305 5.0E-19 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB9643 95c45c870e08dac2bcd17431d0bd3c91 420 SUPERFAMILY SSF111369 56 275 1.07E-20 T 11-11-2016 RB1499 301965181d0b073d135e76b0ea412861 372 SUPERFAMILY SSF52540 72 352 9.71E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1499 301965181d0b073d135e76b0ea412861 372 PIRSF PIRSF002849 34 370 4.5E-134 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB1499 301965181d0b073d135e76b0ea412861 372 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 96 226 4.9E-64 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB1499 301965181d0b073d135e76b0ea412861 372 Gene3D G3DSA:3.40.50.300 78 242 9.4E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1499 301965181d0b073d135e76b0ea412861 372 SMART SM00382 93 234 0.0024 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1499 301965181d0b073d135e76b0ea412861 372 Gene3D G3DSA:1.10.8.300 257 364 1.1E-37 T 11-11-2016 RB9692 3373e20c059b36d64424838d649351cf 159 Pfam PF05638 Type VI secretion system effector, Hcp 3 135 7.8E-27 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp RB9692 3373e20c059b36d64424838d649351cf 159 SUPERFAMILY SSF141452 2 157 1.02E-32 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp RB9692 3373e20c059b36d64424838d649351cf 159 Gene3D G3DSA:2.30.110.20 2 157 1.7E-33 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 Gene3D G3DSA:3.40.50.620 270 462 6.0E-53 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 SUPERFAMILY SSF54810 467 587 2.62E-51 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 77 587 53.724 T 11-11-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 SUPERFAMILY SSF52402 255 508 1.5E-53 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 Pfam PF00958 GMP synthase C terminal domain 495 586 4.1E-45 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00097 Anthranilate synthase component II signature 124 133 1.2E-5 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00097 Anthranilate synthase component II signature 151 162 1.2E-5 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00097 Anthranilate synthase component II signature 239 252 1.2E-5 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 Gene3D G3DSA:3.40.50.880 76 266 9.1E-66 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 Gene3D G3DSA:3.30.300.10 463 587 3.7E-53 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 SUPERFAMILY SSF52317 69 299 3.67E-63 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 80 266 1.4E-77 T 11-11-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 151 167 1.3E-5 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 94 1.3E-5 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 121 135 1.3E-5 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 Pfam PF00117 Glutamine amidotransferase class-I 82 262 2.9E-45 T 11-11-2016 IPR017926 Glutamine amidotransferase RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 Pfam PF02540 NAD synthase 282 317 1.8E-6 T 11-11-2016 IPR022310 NAD/GMP synthase RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00096 Glutamine amidotransferase superfamily signature 239 252 6.5E-8 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00096 Glutamine amidotransferase superfamily signature 124 133 6.5E-8 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 PRINTS PR00096 Glutamine amidotransferase superfamily signature 151 162 6.5E-8 T 11-11-2016 RB8374 78a8d2245ea98c3f9fdf8d72eb11fc5e 587 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 274 587 1.7E-142 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 Gene3D G3DSA:2.130.10.130 512 669 1.4E-11 T 11-11-2016 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 Gene3D G3DSA:2.130.10.130 722 935 6.0E-13 T 11-11-2016 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 590 669 1.4E-12 T 11-11-2016 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 SMART SM00028 295 328 1.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 SMART SM00028 93 126 71.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 SMART SM00028 128 161 63.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 SUPERFAMILY SSF69318 519 937 6.8E-48 T 11-11-2016 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 Gene3D G3DSA:1.25.40.10 89 259 2.3E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 Gene3D G3DSA:1.25.40.10 295 411 2.3E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 Pfam PF07593 ASPIC and UnbV 966 1032 1.3E-13 T 11-11-2016 IPR011519 ASPIC/UnbV RB9073 532b48550c2b19715b52c71c1036ba4f 1041 SUPERFAMILY SSF48452 92 186 1.63E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9073 532b48550c2b19715b52c71c1036ba4f 1041 SUPERFAMILY SSF48452 217 332 1.63E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5111 32ad697ba8cdecb603f9912513690727 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.3E-16 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB5111 32ad697ba8cdecb603f9912513690727 211 Gene3D G3DSA:1.10.10.60 53 74 3.9E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5111 32ad697ba8cdecb603f9912513690727 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 66 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RB5111 32ad697ba8cdecb603f9912513690727 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 8.8E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB5111 32ad697ba8cdecb603f9912513690727 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 8.8E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB5111 32ad697ba8cdecb603f9912513690727 211 Gene3D G3DSA:1.10.10.60 20 52 1.2E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5111 32ad697ba8cdecb603f9912513690727 211 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 153 207 2.8E-16 T 11-11-2016 RB5111 32ad697ba8cdecb603f9912513690727 211 Gene3D G3DSA:1.10.357.10 75 209 3.2E-36 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RB5111 32ad697ba8cdecb603f9912513690727 211 SUPERFAMILY SSF48498 89 207 5.07E-6 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RB5111 32ad697ba8cdecb603f9912513690727 211 SUPERFAMILY SSF46689 14 91 7.98E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB10567 a9e54bf9c2583ac6b09ff21adc8d7b5a 267 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 46 116 1.5E-14 T 11-11-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 RB10567 a9e54bf9c2583ac6b09ff21adc8d7b5a 267 SUPERFAMILY SSF55729 109 263 1.02E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10567 a9e54bf9c2583ac6b09ff21adc8d7b5a 267 PIRSF PIRSF037208 29 267 6.8E-89 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RB10567 a9e54bf9c2583ac6b09ff21adc8d7b5a 267 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 139 257 2.1E-26 T 11-11-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 RB10531 d89b16a9b606144d76a7632e18430ce3 43 Pfam PF07625 Protein of unknown function (DUF1586) 11 30 4.6E-11 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB10966 585309e3fcdfd0775bf3741a6da0ec8d 60 Pfam PF01679 Proteolipid membrane potential modulator 3 49 3.5E-15 T 11-11-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 RB10420 5a62c65c4c9f93f77850f2d74f4a6b1c 363 TIGRFAM TIGR03032 TIGR03032: TIGR03032 family protein 14 351 6.5E-144 T 11-11-2016 IPR017481 Conserved hypothetical protein CHP03032 RB10420 5a62c65c4c9f93f77850f2d74f4a6b1c 363 SUPERFAMILY SSF63825 116 278 6.15E-6 T 11-11-2016 RB10420 5a62c65c4c9f93f77850f2d74f4a6b1c 363 Pfam PF16261 Domain of unknown function (DUF4915) 21 333 1.8E-116 T 11-11-2016 IPR017481 Conserved hypothetical protein CHP03032 RB11985 b7eeee602c580fdabff3a0ee49d745c3 335 SUPERFAMILY SSF50129 3 152 3.2E-41 T 11-11-2016 IPR011032 GroES-like RB11985 b7eeee602c580fdabff3a0ee49d745c3 335 Pfam PF00107 Zinc-binding dehydrogenase 159 284 5.5E-26 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB11985 b7eeee602c580fdabff3a0ee49d745c3 335 Gene3D G3DSA:3.40.50.720 154 268 3.2E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11985 b7eeee602c580fdabff3a0ee49d745c3 335 SMART SM00829 13 331 1.8E-18 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB11985 b7eeee602c580fdabff3a0ee49d745c3 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 91 1.2E-10 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB11985 b7eeee602c580fdabff3a0ee49d745c3 335 Gene3D G3DSA:3.90.180.10 4 153 8.9E-46 T 11-11-2016 IPR011032 GroES-like RB11985 b7eeee602c580fdabff3a0ee49d745c3 335 SUPERFAMILY SSF51735 120 293 4.03E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9598 ea1fc7d52fb8bf7389370d704e0ff346 446 SUPERFAMILY SSF53649 276 428 7.19E-13 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9598 ea1fc7d52fb8bf7389370d704e0ff346 446 Pfam PF07394 Protein of unknown function (DUF1501) 52 445 2.5E-117 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB1464 46a586bfa561ab3fd85db7b5f5a6eb92 622 SUPERFAMILY SSF53649 32 502 1.45E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB1464 46a586bfa561ab3fd85db7b5f5a6eb92 622 Pfam PF00884 Sulfatase 34 385 8.9E-55 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB1464 46a586bfa561ab3fd85db7b5f5a6eb92 622 ProSitePatterns PS00149 Sulfatases signature 2. 145 155 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB1464 46a586bfa561ab3fd85db7b5f5a6eb92 622 Gene3D G3DSA:3.40.720.10 32 406 1.9E-93 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1464 46a586bfa561ab3fd85db7b5f5a6eb92 622 Gene3D G3DSA:3.30.1120.10 420 506 1.5E-11 T 11-11-2016 RB8167 00a9a453cec67345f0e022d3737f0c39 922 SUPERFAMILY SSF48452 793 901 6.41E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 SMART SM00028 815 848 24.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 SMART SM00028 224 257 65.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 SMART SM00028 114 147 33.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 SMART SM00028 850 883 6.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 Pfam PF13432 Tetratricopeptide repeat 118 146 0.015 T 11-11-2016 RB8167 00a9a453cec67345f0e022d3737f0c39 922 Pfam PF13432 Tetratricopeptide repeat 228 289 0.0017 T 11-11-2016 RB8167 00a9a453cec67345f0e022d3737f0c39 922 Pfam PF13432 Tetratricopeptide repeat 805 849 0.011 T 11-11-2016 RB8167 00a9a453cec67345f0e022d3737f0c39 922 Pfam PF13485 Peptidase MA superfamily 538 669 1.1E-9 T 11-11-2016 RB8167 00a9a453cec67345f0e022d3737f0c39 922 Gene3D G3DSA:1.25.40.10 85 165 4.3E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 SUPERFAMILY SSF48452 122 151 6.65E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 SUPERFAMILY SSF48452 192 432 6.65E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 Gene3D G3DSA:1.25.40.10 218 432 3.6E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8167 00a9a453cec67345f0e022d3737f0c39 922 Gene3D G3DSA:1.25.40.10 705 896 2.9E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12409 7479664c1545e4d5c6f97885ca76b134 1032 Pfam PF13519 von Willebrand factor type A domain 90 192 9.9E-13 T 11-11-2016 IPR002035 von Willebrand factor, type A RB12409 7479664c1545e4d5c6f97885ca76b134 1032 Gene3D G3DSA:3.40.50.880 306 461 4.6E-61 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB12409 7479664c1545e4d5c6f97885ca76b134 1032 Gene3D G3DSA:3.40.50.880 645 744 4.6E-61 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB12409 7479664c1545e4d5c6f97885ca76b134 1032 SUPERFAMILY SSF53300 475 633 3.52E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB12409 7479664c1545e4d5c6f97885ca76b134 1032 Pfam PF07090 Putative glutamine amidotransferase 643 743 4.4E-8 T 11-11-2016 IPR010768 Putative glutamine amidotransferase RB12409 7479664c1545e4d5c6f97885ca76b134 1032 SMART SM00327 461 637 0.42 T 11-11-2016 IPR002035 von Willebrand factor, type A RB12409 7479664c1545e4d5c6f97885ca76b134 1032 SMART SM00327 87 252 4.1E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB12409 7479664c1545e4d5c6f97885ca76b134 1032 Pfam PF13768 von Willebrand factor type A domain 476 617 9.5E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB12409 7479664c1545e4d5c6f97885ca76b134 1032 SUPERFAMILY SSF52317 642 744 2.14E-44 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB12409 7479664c1545e4d5c6f97885ca76b134 1032 SUPERFAMILY SSF52317 318 457 2.14E-44 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB12409 7479664c1545e4d5c6f97885ca76b134 1032 Gene3D G3DSA:3.40.50.410 88 221 4.4E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A RB12409 7479664c1545e4d5c6f97885ca76b134 1032 Gene3D G3DSA:3.40.50.410 523 633 6.0E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB12409 7479664c1545e4d5c6f97885ca76b134 1032 SUPERFAMILY SSF53300 87 229 3.71E-16 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6484 edb02f4aaa57df8b865f210c4ad3d9f3 306 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB6484 edb02f4aaa57df8b865f210c4ad3d9f3 306 SUPERFAMILY SSF51717 10 294 2.09E-92 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB6484 edb02f4aaa57df8b865f210c4ad3d9f3 306 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 66 79 - T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB6484 edb02f4aaa57df8b865f210c4ad3d9f3 306 Gene3D G3DSA:3.20.20.20 17 294 1.5E-103 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB6484 edb02f4aaa57df8b865f210c4ad3d9f3 306 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 293 1.3E-91 T 11-11-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 RB6484 edb02f4aaa57df8b865f210c4ad3d9f3 306 Pfam PF00809 Pterin binding enzyme 23 279 2.2E-79 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB7959 e7fa25b794b780ba488e411173d176bd 2211 ProSitePatterns PS00211 ABC transporters family signature. 1868 1882 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.40.50.300 526 643 9.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.40.50.300 655 727 1.2E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.40.50.300 1010 1062 1.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.40.50.300 1647 1712 2.3E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.40.50.300 9 55 9.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.40.50.300 1511 1628 1.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.40.50.300 868 985 1.2E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.40.50.300 1859 1967 2.3E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 ProSitePatterns PS00211 ABC transporters family signature. 877 891 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7959 e7fa25b794b780ba488e411173d176bd 2211 SUPERFAMILY SSF52540 661 952 2.27E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 SUPERFAMILY SSF52540 14 227 8.67E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 SUPERFAMILY SSF52540 478 617 8.67E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Pfam PF00005 ABC transporter 671 907 6.0E-7 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Pfam PF00005 ABC transporter 1662 1898 1.0E-10 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.30.1490.20 1141 1164 1.8E-18 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.30.1490.20 1211 1252 1.8E-18 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.30.1490.20 169 176 1.4E-7 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:3.30.1490.20 223 259 1.4E-7 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB7959 e7fa25b794b780ba488e411173d176bd 2211 ProSitePatterns PS00211 ABC transporters family signature. 535 549 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7959 e7fa25b794b780ba488e411173d176bd 2211 ProSitePatterns PS00211 ABC transporters family signature. 1520 1534 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7959 e7fa25b794b780ba488e411173d176bd 2211 SMART SM00382 1671 1944 0.49 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7959 e7fa25b794b780ba488e411173d176bd 2211 SMART SM00382 27 612 4.5 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7959 e7fa25b794b780ba488e411173d176bd 2211 SMART SM00382 680 1021 3.2 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7959 e7fa25b794b780ba488e411173d176bd 2211 SMART SM00382 1034 1598 8.3 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7959 e7fa25b794b780ba488e411173d176bd 2211 SUPERFAMILY SSF52540 1463 1602 2.79E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 SUPERFAMILY SSF52540 1023 1215 2.79E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.20.1580.10 741 867 5.9E-52 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.20.1580.10 1733 1858 1.3E-46 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.20.1580.10 96 133 1.1E-47 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.20.1580.10 1440 1510 4.4E-46 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.20.1580.10 445 525 1.1E-47 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.20.1580.10 1103 1140 4.4E-46 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.20.1580.10 280 313 1.1E-47 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.20.1580.10 1266 1299 4.4E-46 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 SUPERFAMILY SSF52540 1652 1951 2.84E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7959 e7fa25b794b780ba488e411173d176bd 2211 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 8 972 0.0 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RB7959 e7fa25b794b780ba488e411173d176bd 2211 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 1015 1963 0.0 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.10.8.280 1304 1439 1.6E-11 T 11-11-2016 RB7959 e7fa25b794b780ba488e411173d176bd 2211 Gene3D G3DSA:1.10.8.280 316 444 4.0E-22 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 SUPERFAMILY SSF82866 821 1044 1.03E-50 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 SUPERFAMILY SSF82693 45 133 2.62E-21 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 Gene3D G3DSA:3.30.2090.10 187 268 5.6E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 Gene3D G3DSA:3.30.2090.10 740 822 1.4E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 3 1042 0.0 T 11-11-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 Gene3D G3DSA:3.30.70.1430 45 133 1.2E-23 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 SUPERFAMILY SSF82714 188 269 1.57E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 SUPERFAMILY SSF82714 740 821 7.32E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 Pfam PF00873 AcrB/AcrD/AcrF family 8 1041 2.4E-278 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 5.5E-5 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.5E-5 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 Gene3D G3DSA:1.10.3850.10 279 520 8.4E-52 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 Gene3D G3DSA:1.10.3850.10 829 1043 7.0E-53 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 SUPERFAMILY SSF82866 295 420 2.62E-37 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 SUPERFAMILY SSF82866 448 519 2.62E-37 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 SUPERFAMILY SSF82693 143 185 2.62E-17 T 11-11-2016 RB11240 92e29bb3c5af4e55181482ca7a45c3fa 1053 SUPERFAMILY SSF82693 272 328 2.62E-17 T 11-11-2016 RB7398 d0ff2ded9dbac26977f44f6d0e8e3d71 212 SUPERFAMILY SSF54593 99 209 3.62E-16 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB7398 d0ff2ded9dbac26977f44f6d0e8e3d71 212 Gene3D G3DSA:3.10.180.10 98 209 4.6E-14 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB10009 2dd1cc5121abcee1593795860c19a53f 127 SUPERFAMILY SSF50249 16 79 2.17E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10009 2dd1cc5121abcee1593795860c19a53f 127 Gene3D G3DSA:2.40.50.140 21 85 1.8E-11 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10009 2dd1cc5121abcee1593795860c19a53f 127 Pfam PF00313 'Cold-shock' DNA-binding domain 24 78 1.1E-9 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RB7619 87257aeacb32a8e399da5ea648d4af08 278 Pfam PF02754 Cysteine-rich domain 17 98 7.6E-12 T 11-11-2016 IPR004017 Cysteine-rich domain RB7619 87257aeacb32a8e399da5ea648d4af08 278 Pfam PF02754 Cysteine-rich domain 143 237 5.5E-7 T 11-11-2016 IPR004017 Cysteine-rich domain RB5932 f6319e914ebfc26cc09fc749542a13c1 659 Gene3D G3DSA:1.10.600.10 318 633 2.6E-65 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB5932 f6319e914ebfc26cc09fc749542a13c1 659 SUPERFAMILY SSF48576 321 633 1.44E-60 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB5932 f6319e914ebfc26cc09fc749542a13c1 659 Pfam PF01976 Protein of unknown function DUF116 86 233 3.2E-38 T 11-11-2016 IPR002829 Protein of unknown function DUF116 RB5932 f6319e914ebfc26cc09fc749542a13c1 659 Pfam PF00348 Polyprenyl synthetase 323 569 8.0E-43 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 RB4017 0fc5dd3d40256737fc979e9435837e89 621 Pfam PF00884 Sulfatase 268 435 1.4E-22 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB4017 0fc5dd3d40256737fc979e9435837e89 621 Pfam PF00884 Sulfatase 154 256 3.7E-20 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB4017 0fc5dd3d40256737fc979e9435837e89 621 Gene3D G3DSA:3.30.1120.10 474 490 7.4E-22 T 11-11-2016 RB4017 0fc5dd3d40256737fc979e9435837e89 621 Gene3D G3DSA:3.30.1120.10 529 581 7.4E-22 T 11-11-2016 RB4017 0fc5dd3d40256737fc979e9435837e89 621 Gene3D G3DSA:3.40.720.10 284 473 9.3E-33 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4017 0fc5dd3d40256737fc979e9435837e89 621 Gene3D G3DSA:3.40.720.10 151 275 1.2E-34 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4017 0fc5dd3d40256737fc979e9435837e89 621 SUPERFAMILY SSF53649 152 488 1.67E-94 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB4017 0fc5dd3d40256737fc979e9435837e89 621 SUPERFAMILY SSF53649 527 572 1.67E-94 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8031 d3bce047a481cb59104556aae5d8bc04 396 SUPERFAMILY SSF51004 64 394 2.2E-42 T 11-11-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RB8031 d3bce047a481cb59104556aae5d8bc04 396 Gene3D G3DSA:2.130.10.10 43 394 3.9E-93 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB8031 d3bce047a481cb59104556aae5d8bc04 396 Pfam PF10282 Lactonase, 7-bladed beta-propeller 44 394 1.5E-112 T 11-11-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 RB12661 07f7e4faf1cda54f66d343652e0a9548 302 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 3 291 38.362 T 11-11-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686 RB12661 07f7e4faf1cda54f66d343652e0a9548 302 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 20 274 1.2E-28 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB12661 07f7e4faf1cda54f66d343652e0a9548 302 Gene3D G3DSA:3.20.20.70 7 284 5.3E-63 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB12661 07f7e4faf1cda54f66d343652e0a9548 302 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 4 280 8.3E-105 T 11-11-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686 RB12661 07f7e4faf1cda54f66d343652e0a9548 302 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 100 113 - T 11-11-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB12661 07f7e4faf1cda54f66d343652e0a9548 302 SMART SM00934 18 280 4.7E-37 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB12661 07f7e4faf1cda54f66d343652e0a9548 302 SUPERFAMILY SSF51366 4 282 5.97E-73 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB289 f099ab18550181831f881352127d7ceb 302 Gene3D G3DSA:3.90.550.10 63 232 1.6E-21 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB289 f099ab18550181831f881352127d7ceb 302 Pfam PF00535 Glycosyl transferase family 2 63 185 3.3E-25 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB289 f099ab18550181831f881352127d7ceb 302 SUPERFAMILY SSF53448 58 284 7.11E-33 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Gene3D G3DSA:1.10.287.130 321 387 5.3E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 52 180 2.7E-7 T 11-11-2016 IPR000014 PAS domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 185 313 1.4E-6 T 11-11-2016 IPR000014 PAS domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Gene3D G3DSA:3.30.450.20 51 168 5.4E-14 T 11-11-2016 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SUPERFAMILY SSF52172 577 695 2.85E-34 T 11-11-2016 IPR011006 CheY-like superfamily RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Pfam PF08447 PAS fold 80 164 1.5E-8 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Pfam PF08447 PAS fold 211 287 3.1E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SMART SM00448 577 691 1.8E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SMART SM00387 438 551 4.6E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Gene3D G3DSA:3.30.565.10 397 546 1.1E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 549 2.4E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 504 3.4E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 490 3.4E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 3.4E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 3.4E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Pfam PF00072 Response regulator receiver domain 579 691 3.5E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SUPERFAMILY SSF55785 171 304 7.15E-17 T 11-11-2016 IPR000014 PAS domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SMART SM00091 186 253 23.0 T 11-11-2016 IPR000014 PAS domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SMART SM00091 54 121 0.28 T 11-11-2016 IPR000014 PAS domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SUPERFAMILY SSF55874 380 548 4.06E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Pfam PF00512 His Kinase A (phospho-acceptor) domain 326 391 1.7E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SUPERFAMILY SSF47384 311 392 3.92E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SUPERFAMILY SSF55785 64 176 4.71E-11 T 11-11-2016 IPR000014 PAS domain RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SMART SM00388 326 391 7.4E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Gene3D G3DSA:3.30.450.20 169 320 1.8E-30 T 11-11-2016 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 Gene3D G3DSA:3.40.50.2300 577 695 5.4E-36 T 11-11-2016 RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SMART SM00086 129 174 42.0 T 11-11-2016 IPR001610 PAC motif RB13112 b3c49e37b1a6cccc3300f4c46257a67f 697 SMART SM00086 261 306 5.5E-5 T 11-11-2016 IPR001610 PAC motif RB4601 e89bc8ca120c453c8383a10b05e2dcd3 318 SUPERFAMILY SSF54523 31 122 2.35E-11 T 11-11-2016 RB4601 e89bc8ca120c453c8383a10b05e2dcd3 318 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 28 48 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4601 e89bc8ca120c453c8383a10b05e2dcd3 318 Pfam PF07596 Protein of unknown function (DUF1559) 55 295 1.2E-35 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB4173 96e361503782d9f1903fd5d2f65414be 337 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 65 336 58.92 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RB4173 96e361503782d9f1903fd5d2f65414be 337 SMART SM00963 40 121 2.1E-5 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB4173 96e361503782d9f1903fd5d2f65414be 337 SUPERFAMILY SSF52540 133 335 4.46E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4173 96e361503782d9f1903fd5d2f65414be 337 Gene3D G3DSA:3.40.50.300 146 336 9.4E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4173 96e361503782d9f1903fd5d2f65414be 337 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 309 322 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB4173 96e361503782d9f1903fd5d2f65414be 337 SMART SM00962 135 336 1.3E-105 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB4173 96e361503782d9f1903fd5d2f65414be 337 SUPERFAMILY SSF47364 35 113 1.94E-11 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB4173 96e361503782d9f1903fd5d2f65414be 337 Pfam PF00448 SRP54-type protein, GTPase domain 135 335 1.9E-70 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB4173 96e361503782d9f1903fd5d2f65414be 337 Gene3D G3DSA:1.20.120.140 66 145 5.4E-16 T 11-11-2016 RB4173 96e361503782d9f1903fd5d2f65414be 337 SMART SM00382 134 312 1.9E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain RB4173 96e361503782d9f1903fd5d2f65414be 337 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 67 334 2.1E-93 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RB6823 cde9e323efdceb53340b8ced8673443e 568 PRINTS PR00046 Major sigma-70 factor signature 370 378 1.6E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 PRINTS PR00046 Major sigma-70 factor signature 346 359 1.6E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 PRINTS PR00046 Major sigma-70 factor signature 530 541 1.6E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 PRINTS PR00046 Major sigma-70 factor signature 515 530 1.6E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 PRINTS PR00046 Major sigma-70 factor signature 494 506 1.6E-28 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 SUPERFAMILY SSF88659 395 468 1.44E-19 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 Gene3D G3DSA:1.10.601.10 130 391 5.7E-62 T 11-11-2016 RB6823 cde9e323efdceb53340b8ced8673443e 568 Gene3D G3DSA:1.10.601.10 69 129 1.2E-5 T 11-11-2016 RB6823 cde9e323efdceb53340b8ced8673443e 568 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 323 543 3.2E-36 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 SUPERFAMILY SSF88946 100 178 6.02E-54 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 SUPERFAMILY SSF88946 290 392 6.02E-54 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 Pfam PF04545 Sigma-70, region 4 490 542 2.3E-17 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 Gene3D G3DSA:1.10.10.10 485 555 1.7E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6823 cde9e323efdceb53340b8ced8673443e 568 Pfam PF04542 Sigma-70 region 2 326 392 6.7E-20 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 SUPERFAMILY SSF88659 453 547 5.05E-25 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 Pfam PF00140 Sigma-70 factor, region 1.2 103 134 1.5E-11 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 515 541 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6823 cde9e323efdceb53340b8ced8673443e 568 Gene3D G3DSA:1.10.10.10 392 445 1.9E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6823 cde9e323efdceb53340b8ced8673443e 568 Pfam PF04539 Sigma-70 region 3 402 474 4.4E-21 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 Pfam PF13537 Glutamine amidotransferase domain 59 176 3.3E-45 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 Gene3D G3DSA:3.60.20.10 1 231 1.9E-75 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 Gene3D G3DSA:3.40.50.620 482 632 1.9E-89 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 Gene3D G3DSA:3.40.50.620 232 385 1.9E-89 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 SUPERFAMILY SSF56235 1 233 8.58E-66 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 PIRSF PIRSF001589 1 634 1.0E-176 T 11-11-2016 RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 Pfam PF00733 Asparagine synthase 249 632 9.1E-105 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 SUPERFAMILY SSF52402 241 389 4.19E-84 T 11-11-2016 RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 SUPERFAMILY SSF52402 487 626 4.19E-84 T 11-11-2016 RB4577 cdddde4cb41615eb20881a8bdb702ecf 634 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 567 8.6E-146 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 RB12766 577c460eda2b8ee855d0e5478c93efd9 371 SUPERFAMILY SSF141868 144 370 1.44E-45 T 11-11-2016 IPR001633 EAL domain RB12766 577c460eda2b8ee855d0e5478c93efd9 371 Gene3D G3DSA:2.60.200.20 32 117 5.3E-21 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB12766 577c460eda2b8ee855d0e5478c93efd9 371 SUPERFAMILY SSF49879 30 120 4.21E-21 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB12766 577c460eda2b8ee855d0e5478c93efd9 371 Pfam PF00498 FHA domain 46 108 1.0E-14 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB12766 577c460eda2b8ee855d0e5478c93efd9 371 SMART SM00052 135 371 2.1E-11 T 11-11-2016 IPR001633 EAL domain RB12766 577c460eda2b8ee855d0e5478c93efd9 371 SMART SM00240 44 94 1.3E-9 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB12766 577c460eda2b8ee855d0e5478c93efd9 371 Pfam PF00563 EAL domain 143 368 4.7E-39 T 11-11-2016 IPR001633 EAL domain RB12766 577c460eda2b8ee855d0e5478c93efd9 371 Gene3D G3DSA:3.20.20.450 146 371 8.2E-44 T 11-11-2016 IPR001633 EAL domain RB11401 965742ed3295c44c04cbb9b12f06be45 1071 Gene3D G3DSA:3.40.50.300 351 511 3.7E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11401 965742ed3295c44c04cbb9b12f06be45 1071 SMART SM00490 606 687 2.1E-10 T 11-11-2016 IPR001650 Helicase, C-terminal RB11401 965742ed3295c44c04cbb9b12f06be45 1071 SMART SM00487 350 542 1.5E-9 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB11401 965742ed3295c44c04cbb9b12f06be45 1071 SUPERFAMILY SSF52540 405 547 2.33E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11401 965742ed3295c44c04cbb9b12f06be45 1071 SUPERFAMILY SSF52540 575 705 2.33E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11401 965742ed3295c44c04cbb9b12f06be45 1071 Pfam PF11907 Domain of unknown function (DUF3427) 817 1064 4.6E-29 T 11-11-2016 IPR021835 Protein of unknown function DUF3427 RB11401 965742ed3295c44c04cbb9b12f06be45 1071 SUPERFAMILY SSF56024 187 316 3.36E-9 T 11-11-2016 RB11401 965742ed3295c44c04cbb9b12f06be45 1071 Gene3D G3DSA:3.40.50.300 580 705 3.5E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11401 965742ed3295c44c04cbb9b12f06be45 1071 Pfam PF13091 PLD-like domain 185 314 1.1E-9 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RB11401 965742ed3295c44c04cbb9b12f06be45 1071 Pfam PF04851 Type III restriction enzyme, res subunit 353 507 1.4E-28 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RB11401 965742ed3295c44c04cbb9b12f06be45 1071 Gene3D G3DSA:3.30.870.10 195 317 2.9E-7 T 11-11-2016 RB11401 965742ed3295c44c04cbb9b12f06be45 1071 Pfam PF00271 Helicase conserved C-terminal domain 589 685 3.6E-10 T 11-11-2016 IPR001650 Helicase, C-terminal RB9364 8989b1e0ea78fdd2ff58558c6c318e1a 538 Gene3D G3DSA:1.10.8.60 370 447 3.9E-13 T 11-11-2016 RB9364 8989b1e0ea78fdd2ff58558c6c318e1a 538 Pfam PF00158 Sigma-54 interaction domain 195 361 1.1E-51 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB9364 8989b1e0ea78fdd2ff58558c6c318e1a 538 SMART SM00382 214 360 3.6E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9364 8989b1e0ea78fdd2ff58558c6c318e1a 538 PIRSF PIRSF037354 2 538 8.5E-294 T 11-11-2016 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 RB9364 8989b1e0ea78fdd2ff58558c6c318e1a 538 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 3 192 4.8E-83 T 11-11-2016 IPR009715 Regulator of RNA terminal phosphate cyclase RB9364 8989b1e0ea78fdd2ff58558c6c318e1a 538 Gene3D G3DSA:3.40.50.300 195 366 1.6E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9364 8989b1e0ea78fdd2ff58558c6c318e1a 538 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 283 298 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB9364 8989b1e0ea78fdd2ff58558c6c318e1a 538 SUPERFAMILY SSF52540 197 445 1.57E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2121 7bde91876600b7eeea265b215dfef5c6 298 Gene3D G3DSA:3.40.50.300 30 294 4.3E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2121 7bde91876600b7eeea265b215dfef5c6 298 PIRSF PIRSF028756 23 297 6.5E-74 T 11-11-2016 IPR016898 Polyphosphate kinase 2 RB2121 7bde91876600b7eeea265b215dfef5c6 298 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 31 284 2.4E-109 T 11-11-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 RB2121 7bde91876600b7eeea265b215dfef5c6 298 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 51 274 2.3E-72 T 11-11-2016 IPR022488 Polyphosphate kinase-2-related RB2121 7bde91876600b7eeea265b215dfef5c6 298 SUPERFAMILY SSF52540 80 263 1.69E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10106 9152890cf1a772f63824782fd53f985e 126 Gene3D G3DSA:3.30.70.830 9 125 1.5E-35 T 11-11-2016 RB10106 9152890cf1a772f63824782fd53f985e 126 SUPERFAMILY SSF54913 24 125 1.04E-33 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RB10106 9152890cf1a772f63824782fd53f985e 126 Pfam PF03091 CutA1 divalent ion tolerance protein 26 122 7.1E-32 T 11-11-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 SUPERFAMILY SSF50249 427 548 6.51E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 Gene3D G3DSA:3.30.1490.70 201 242 1.3E-15 T 11-11-2016 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 Gene3D G3DSA:3.30.1490.70 380 423 1.3E-15 T 11-11-2016 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 Pfam PF04679 ATP dependent DNA ligase C terminal region 444 533 2.7E-12 T 11-11-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 Pfam PF01068 ATP dependent DNA ligase domain 235 423 4.0E-26 T 11-11-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 SUPERFAMILY SSF56091 323 424 8.15E-47 T 11-11-2016 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 SUPERFAMILY SSF56091 171 290 8.15E-47 T 11-11-2016 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 238 246 - T 11-11-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 Pfam PF04675 DNA ligase N terminus 3 163 7.5E-20 T 11-11-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 Gene3D G3DSA:3.30.470.30 243 367 6.2E-24 T 11-11-2016 RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 Gene3D G3DSA:2.40.50.140 427 548 1.2E-36 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1571 b9b29cabd90c5ed4cd78a26643f4a519 564 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 548 4.2E-192 T 11-11-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family RB8924 8277af221317eeec34265749d81ba6c2 413 Pfam PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 37 217 1.4E-45 T 11-11-2016 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8924 8277af221317eeec34265749d81ba6c2 413 PIRSF PIRSF006392 1 413 2.8E-148 T 11-11-2016 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8924 8277af221317eeec34265749d81ba6c2 413 TIGRFAM TIGR02535 hyp_Hser_kinase: proposed homoserine kinase 1 411 2.9E-184 T 11-11-2016 IPR023665 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, prokaryotes GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8924 8277af221317eeec34265749d81ba6c2 413 TIGRFAM TIGR00306 apgM: phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal form 4 409 4.0E-105 T 11-11-2016 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8924 8277af221317eeec34265749d81ba6c2 413 Pfam PF01676 Metalloenzyme superfamily 1 391 2.7E-37 T 11-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 RB8924 8277af221317eeec34265749d81ba6c2 413 Gene3D G3DSA:3.40.720.10 205 387 1.6E-27 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8924 8277af221317eeec34265749d81ba6c2 413 Gene3D G3DSA:3.40.720.10 2 80 1.6E-27 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8924 8277af221317eeec34265749d81ba6c2 413 SUPERFAMILY SSF53649 1 70 4.45E-32 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8924 8277af221317eeec34265749d81ba6c2 413 SUPERFAMILY SSF53649 201 388 4.45E-32 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Gene3D G3DSA:1.10.10.10 360 531 4.0E-38 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Pfam PF14493 Helix-turn-helix domain 651 735 1.7E-21 T 11-11-2016 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 29 616 1.8E-215 T 11-11-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Pfam PF00270 DEAD/DEAH box helicase 43 204 7.0E-18 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Gene3D G3DSA:1.10.150.80 547 621 4.4E-21 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Pfam PF00570 HRDC domain 548 614 6.0E-21 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Pfam PF09382 RQC domain 429 532 6.4E-27 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 SMART SM00487 37 231 1.3E-28 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 SUPERFAMILY SSF52540 25 219 3.58E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Pfam PF16124 RecQ zinc-binding 359 419 8.2E-11 T 11-11-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 SUPERFAMILY SSF52540 223 471 4.16E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 SMART SM00490 265 346 3.0E-25 T 11-11-2016 IPR001650 Helicase, C-terminal RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 SMART SM00956 427 529 2.1E-33 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 30 475 8.9E-150 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 SUPERFAMILY SSF47819 540 626 1.37E-24 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Gene3D G3DSA:3.40.50.300 222 359 1.4E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Gene3D G3DSA:3.40.50.300 27 219 2.9E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 Pfam PF00271 Helicase conserved C-terminal domain 238 346 3.8E-17 T 11-11-2016 IPR001650 Helicase, C-terminal RB5969 8463f88e60b0655497ae48b9d5e1f99f 749 SMART SM00341 544 624 2.0E-12 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RB9728 75e9073d2654293c8a61cace2b5e8b2b 172 Pfam PF04542 Sigma-70 region 2 16 77 2.5E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9728 75e9073d2654293c8a61cace2b5e8b2b 172 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 7 163 6.0E-51 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB9728 75e9073d2654293c8a61cace2b5e8b2b 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 162 2.6E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9728 75e9073d2654293c8a61cace2b5e8b2b 172 SUPERFAMILY SSF88946 12 89 1.55E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9728 75e9073d2654293c8a61cace2b5e8b2b 172 Pfam PF08281 Sigma-70, region 4 110 158 1.3E-8 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9728 75e9073d2654293c8a61cace2b5e8b2b 172 SUPERFAMILY SSF88659 105 163 8.78E-9 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9728 75e9073d2654293c8a61cace2b5e8b2b 172 Gene3D G3DSA:1.10.1740.10 16 87 4.0E-14 T 11-11-2016 RB9728 75e9073d2654293c8a61cace2b5e8b2b 172 Gene3D G3DSA:1.10.10.10 104 164 1.2E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3395 ffefb31531a5a44268415592a785ad62 398 Pfam PF07596 Protein of unknown function (DUF1559) 34 351 2.7E-63 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB3395 ffefb31531a5a44268415592a785ad62 398 SUPERFAMILY SSF54523 10 154 8.63E-28 T 11-11-2016 RB3395 ffefb31531a5a44268415592a785ad62 398 Gene3D G3DSA:3.30.700.10 10 73 6.9E-7 T 11-11-2016 RB3395 ffefb31531a5a44268415592a785ad62 398 Pfam PF13633 Prokaryotic N-terminal methylation site 8 33 1.2E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3395 ffefb31531a5a44268415592a785ad62 398 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.7E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3395 ffefb31531a5a44268415592a785ad62 398 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5876 9bd06455fc336863f4ef0f46dd2baa28 328 Gene3D G3DSA:1.10.510.10 1 98 2.4E-15 T 11-11-2016 RB5876 9bd06455fc336863f4ef0f46dd2baa28 328 SUPERFAMILY SSF49899 126 282 6.14E-21 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5876 9bd06455fc336863f4ef0f46dd2baa28 328 Gene3D G3DSA:2.60.120.200 134 283 9.9E-17 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5876 9bd06455fc336863f4ef0f46dd2baa28 328 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 158 282 2.7E-19 T 11-11-2016 RB5876 9bd06455fc336863f4ef0f46dd2baa28 328 Pfam PF00069 Protein kinase domain 1 84 1.0E-7 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB5876 9bd06455fc336863f4ef0f46dd2baa28 328 SUPERFAMILY SSF56112 1 101 1.66E-16 T 11-11-2016 IPR011009 Protein kinase-like domain RB5876 9bd06455fc336863f4ef0f46dd2baa28 328 SMART SM00560 161 281 0.0033 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB10078 daab036a5e41389eaee87fcc8df92c50 688 SUPERFAMILY SSF50494 607 644 3.65E-21 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB10078 daab036a5e41389eaee87fcc8df92c50 688 SUPERFAMILY SSF50494 178 276 3.65E-21 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB10078 daab036a5e41389eaee87fcc8df92c50 688 SUPERFAMILY SSF50494 67 100 3.65E-21 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB10078 daab036a5e41389eaee87fcc8df92c50 688 Gene3D G3DSA:2.40.10.10 604 661 3.0E-9 T 11-11-2016 RB10078 daab036a5e41389eaee87fcc8df92c50 688 Pfam PF10459 Peptidase S46 28 687 1.4E-203 T 11-11-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 RB10078 daab036a5e41389eaee87fcc8df92c50 688 Gene3D G3DSA:2.40.10.10 64 93 1.2E-5 T 11-11-2016 RB1819 722f58d8db2ffdc9965f4b724763d683 334 Gene3D G3DSA:3.40.50.720 16 188 2.4E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1819 722f58d8db2ffdc9965f4b724763d683 334 Gene3D G3DSA:3.90.25.10 189 328 1.1E-36 T 11-11-2016 RB1819 722f58d8db2ffdc9965f4b724763d683 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 20 256 1.5E-48 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB1819 722f58d8db2ffdc9965f4b724763d683 334 SUPERFAMILY SSF51735 11 326 2.07E-75 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6447 b89b6f44305227ce5e452eaff7a4806d 767 Pfam PF07584 Aerotolerance regulator N-terminal 1 76 3.7E-14 T 11-11-2016 IPR024163 Aerotolerance regulator, N-terminal RB6447 b89b6f44305227ce5e452eaff7a4806d 767 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 81 2.9E-28 T 11-11-2016 IPR011933 Double transmembrane domain RB6447 b89b6f44305227ce5e452eaff7a4806d 767 SUPERFAMILY SSF53300 88 210 3.21E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 SUPERFAMILY SSF51735 9 264 4.1E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 Gene3D G3DSA:3.40.50.720 5 265 1.4E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 1.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.6E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 264 5.1E-45 T 11-11-2016 RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.3E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.3E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8728 d0c8c211edc9b5a3b2e06da44ca094f2 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.3E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4029 87badf89d72bea06e1392269b91744a9 154 SUPERFAMILY SSF143011 76 139 1.24E-5 T 11-11-2016 RB4029 87badf89d72bea06e1392269b91744a9 154 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 58 142 3.6E-13 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RB6885 eda2d162e9c592cb226251425589ca9a 770 Gene3D G3DSA:1.10.710.10 615 752 4.7E-15 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6885 eda2d162e9c592cb226251425589ca9a 770 Pfam PF13435 Cytochrome c554 and c-prime 621 701 3.7E-12 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6885 eda2d162e9c592cb226251425589ca9a 770 SUPERFAMILY SSF56300 322 596 7.59E-25 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB6885 eda2d162e9c592cb226251425589ca9a 770 Gene3D G3DSA:3.60.21.10 323 596 1.1E-15 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB6885 eda2d162e9c592cb226251425589ca9a 770 SUPERFAMILY SSF48695 615 758 5.33E-19 T 11-11-2016 IPR011031 Multihaem cytochrome RB8820 3df5d4035ca411913c31dc27c2d131ec 276 Pfam PF00072 Response regulator receiver domain 153 264 3.6E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB8820 3df5d4035ca411913c31dc27c2d131ec 276 Gene3D G3DSA:3.40.50.2300 148 265 1.7E-23 T 11-11-2016 RB8820 3df5d4035ca411913c31dc27c2d131ec 276 SUPERFAMILY SSF52172 149 266 3.27E-23 T 11-11-2016 IPR011006 CheY-like superfamily RB8820 3df5d4035ca411913c31dc27c2d131ec 276 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 11 58 2.0E-4 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB8820 3df5d4035ca411913c31dc27c2d131ec 276 SMART SM00448 150 264 1.8E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB8820 3df5d4035ca411913c31dc27c2d131ec 276 SUPERFAMILY SSF117130 10 65 1.22E-9 T 11-11-2016 RB8820 3df5d4035ca411913c31dc27c2d131ec 276 Pfam PF02599 Global regulator protein family 11 61 2.1E-13 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF00059 Lectin C-type domain 2470 2573 3.0E-5 T 11-11-2016 IPR001304 C-type lectin RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49313 6608 6704 8.64E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49313 7305 7385 6.94E-7 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.40.60 3254 3343 2.3E-9 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.40.60 7293 7386 5.8E-10 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.40.60 2586 2649 1.9E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 PRINTS PR00205 Cadherin signature 6120 6139 8.8E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 PRINTS PR00205 Cadherin signature 6952 6971 8.8E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 PRINTS PR00205 Cadherin signature 7233 7259 8.8E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 PRINTS PR00205 Cadherin signature 6676 6688 8.8E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 PRINTS PR00895 Pentaxin signature 1652 1671 2.8E-11 T 11-11-2016 IPR001759 Pentaxin-related RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 PRINTS PR00895 Pentaxin signature 1632 1651 2.8E-11 T 11-11-2016 IPR001759 Pentaxin-related RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 PRINTS PR00895 Pentaxin signature 1605 1623 2.8E-11 T 11-11-2016 IPR001759 Pentaxin-related RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 PRINTS PR00895 Pentaxin signature 1559 1573 2.8E-11 T 11-11-2016 IPR001759 Pentaxin-related RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.40.60 6978 7064 1.5E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.40.60 7083 7170 2.4E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49313 2576 2649 1.06E-7 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF69304 460 692 3.4E-6 T 11-11-2016 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF14252 Domain of unknown function (DUF4347) 322 490 3.3E-46 T 11-11-2016 IPR025592 Domain of unknown function DUF4347 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 3601 3623 170.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 5182 5212 4800.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 3625 3657 4.7 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 3549 3571 2100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 3659 3681 4.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 4327 4372 6500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 972 998 3200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 6247 6271 3100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 1138 1158 2700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 2236 2257 8000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 3489 3512 900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 3573 3600 21.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 1105 1133 19.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 3683 3717 830.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 1051 1072 1400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 6398 6418 8400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00710 6114 6135 2000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00034 1772 1917 0.016 T 11-11-2016 IPR001304 C-type lectin RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00034 2434 2577 7.1E-4 T 11-11-2016 IPR001304 C-type lectin RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF00354 Pentaxin family 2099 2212 1.0E-10 T 11-11-2016 IPR001759 Pentaxin-related RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF00354 Pentaxin family 1538 1698 5.1E-19 T 11-11-2016 IPR001759 Pentaxin-related RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF56436 2442 2576 1.45E-16 T 11-11-2016 IPR016187 C-type lectin fold RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.120.200 1533 1712 1.0E-38 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.120.200 2029 2212 1.9E-30 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49899 2012 2212 2.61E-23 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.40.60 1925 1983 3.9E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1327 1489 3.0E-22 T 11-11-2016 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 3862 4016 1.5E-32 T 11-11-2016 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 2812 2961 6.2E-22 T 11-11-2016 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00159 1517 1720 9.0E-9 T 11-11-2016 IPR001759 Pentaxin-related RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.120.200 3855 4017 5.7E-33 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49313 1925 1993 4.28E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF51126 897 1274 7.85E-34 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49313 7188 7274 9.95E-15 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF88633 5135 5342 1.77E-6 T 11-11-2016 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00282 2032 2172 0.4 T 11-11-2016 IPR001791 Laminin G domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00282 3880 4008 0.36 T 11-11-2016 IPR001791 Laminin G domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00282 1346 1483 8.0E-7 T 11-11-2016 IPR001791 Laminin G domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 TIGRFAM TIGR01376 POMP_repeat: chlamydial polymorphic outer membrane protein repeat 1088 1111 6.4E-4 T 11-11-2016 IPR003368 Polymorphic outer membrane protein repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF04862 Protein of unknown function (DUF642) 2277 2419 4.2E-11 T 11-11-2016 IPR006946 Domain of unknown function DUF642 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF04862 Protein of unknown function (DUF642) 4598 4703 7.3E-7 T 11-11-2016 IPR006946 Domain of unknown function DUF642 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49313 7083 7171 2.88E-10 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:3.10.100.10 2438 2579 4.7E-18 T 11-11-2016 IPR016186 C-type lectin-like RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF56436 1783 1915 1.61E-17 T 11-11-2016 IPR016187 C-type lectin fold RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49785 4573 4704 3.06E-5 T 11-11-2016 IPR008979 Galactose-binding domain-like RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49899 3850 4017 4.75E-37 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF00028 Cadherin domain 6979 7064 5.1E-9 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF00028 Cadherin domain 7189 7273 5.9E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF00028 Cadherin domain 7083 7164 9.4E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.40.60 7189 7277 3.8E-16 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Pfam PF16184 Cadherin-like 3113 3219 1.0E-20 T 11-11-2016 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:3.10.100.10 1779 1915 2.7E-18 T 11-11-2016 IPR016186 C-type lectin-like RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49899 1518 1704 1.03E-30 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00560 2828 2958 6.6E-4 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00560 3880 4013 3.6E-5 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.120.200 1278 1495 1.2E-33 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.120.200 4027 4083 9.4E-4 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 Gene3D G3DSA:2.60.120.200 2759 2963 4.1E-28 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00112 3265 3347 0.0034 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00112 1915 1998 0.13 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00112 7202 7281 1.1E-13 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00112 6993 7071 5.7E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00112 2575 2654 4.1E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00112 7098 7177 6.7E-9 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SMART SM00112 7308 7387 1.2E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49313 3252 3342 9.95E-10 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF51126 3443 3503 2.32E-17 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF51126 3541 3702 2.32E-17 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49899 2751 2965 2.61E-30 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49313 6964 7076 2.22E-11 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 4120 4192 5.4E-8 T 11-11-2016 IPR010221 VCBS repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 6895 6982 9.2E-13 T 11-11-2016 IPR010221 VCBS repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 6790 6853 2.0E-4 T 11-11-2016 IPR010221 VCBS repeat RB1661 859dbfb0eaee44236f90a9f6f05596d9 7716 SUPERFAMILY SSF49899 1279 1495 3.63E-34 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5071 dc2764eba42eb08def4a8db89cf0acf3 302 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5071 dc2764eba42eb08def4a8db89cf0acf3 302 Pfam PF07596 Protein of unknown function (DUF1559) 42 288 2.4E-55 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5071 dc2764eba42eb08def4a8db89cf0acf3 302 SUPERFAMILY SSF54523 18 156 1.96E-19 T 11-11-2016 RB5071 dc2764eba42eb08def4a8db89cf0acf3 302 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 14 35 1.7E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5071 dc2764eba42eb08def4a8db89cf0acf3 302 Gene3D G3DSA:3.30.700.10 18 92 4.7E-8 T 11-11-2016 RB5071 dc2764eba42eb08def4a8db89cf0acf3 302 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 1.4E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8926 fad1211fc05a506d8a579f064e1646ce 595 SUPERFAMILY SSF53633 3 242 6.15E-72 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB8926 fad1211fc05a506d8a579f064e1646ce 595 Pfam PF00696 Amino acid kinase family 3 230 2.0E-50 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB8926 fad1211fc05a506d8a579f064e1646ce 595 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 401 2.2E-125 T 11-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RB8926 fad1211fc05a506d8a579f064e1646ce 595 Pfam PF13840 ACT domain 335 397 2.1E-12 T 11-11-2016 IPR027795 GATS-like ACT domain RB8926 fad1211fc05a506d8a579f064e1646ce 595 SUPERFAMILY SSF55021 436 516 5.35E-15 T 11-11-2016 RB8926 fad1211fc05a506d8a579f064e1646ce 595 SUPERFAMILY SSF55021 249 324 3.44E-14 T 11-11-2016 RB8926 fad1211fc05a506d8a579f064e1646ce 595 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 400 1.2E-112 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RB8926 fad1211fc05a506d8a579f064e1646ce 595 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RB8926 fad1211fc05a506d8a579f064e1646ce 595 Gene3D G3DSA:3.40.1160.10 1 245 3.3E-68 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB8926 fad1211fc05a506d8a579f064e1646ce 595 SUPERFAMILY SSF55021 520 592 2.37E-12 T 11-11-2016 RB8926 fad1211fc05a506d8a579f064e1646ce 595 SUPERFAMILY SSF55021 324 403 2.82E-24 T 11-11-2016 RB8266 66bc4061f528a522527083facec08846 349 Pfam PF01261 Xylose isomerase-like TIM barrel 94 294 5.9E-29 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8266 66bc4061f528a522527083facec08846 349 Gene3D G3DSA:3.20.20.150 88 318 1.5E-39 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8266 66bc4061f528a522527083facec08846 349 SUPERFAMILY SSF51658 84 341 1.17E-44 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB11116 465fa289f7e4f5f10311c0fa9343af2f 549 SUPERFAMILY SSF53649 43 537 2.18E-145 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB11116 465fa289f7e4f5f10311c0fa9343af2f 549 Pfam PF00884 Sulfatase 45 438 1.8E-74 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB11116 465fa289f7e4f5f10311c0fa9343af2f 549 Gene3D G3DSA:3.30.1120.10 470 544 3.1E-20 T 11-11-2016 RB11116 465fa289f7e4f5f10311c0fa9343af2f 549 Gene3D G3DSA:3.40.720.10 42 465 2.5E-124 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8788 d824094121dc57f18e2633eb0cdec017 564 PIRSF PIRSF000538 20 562 3.0E-58 T 11-11-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RB8788 d824094121dc57f18e2633eb0cdec017 564 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 22 297 1.0E-14 T 11-11-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RB8788 d824094121dc57f18e2633eb0cdec017 564 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 309 507 5.7E-50 T 11-11-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RB8788 d824094121dc57f18e2633eb0cdec017 564 SUPERFAMILY SSF53067 301 560 1.03E-52 T 11-11-2016 RB8788 d824094121dc57f18e2633eb0cdec017 564 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 406 426 - T 11-11-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RB8788 d824094121dc57f18e2633eb0cdec017 564 Gene3D G3DSA:3.30.420.40 302 559 5.5E-50 T 11-11-2016 RB8788 d824094121dc57f18e2633eb0cdec017 564 Gene3D G3DSA:3.30.420.40 21 299 2.8E-41 T 11-11-2016 RB8788 d824094121dc57f18e2633eb0cdec017 564 SUPERFAMILY SSF53067 23 302 1.04E-38 T 11-11-2016 RB9945 52cc3a0625e5c74dbbf69e76d895f1a8 317 SUPERFAMILY SSF52317 240 300 3.89E-33 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9945 52cc3a0625e5c74dbbf69e76d895f1a8 317 SUPERFAMILY SSF52317 35 197 3.89E-33 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9945 52cc3a0625e5c74dbbf69e76d895f1a8 317 Gene3D G3DSA:3.40.50.880 34 302 1.5E-22 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9945 52cc3a0625e5c74dbbf69e76d895f1a8 317 Pfam PF06283 Trehalose utilisation 38 285 7.3E-11 T 11-11-2016 IPR029010 ThuA-like domain RB12229 c3978a36a0a60714bb11c25323565052 187 Pfam PF07617 Protein of unknown function (DUF1579) 30 183 2.1E-55 T 11-11-2016 IPR011473 Protein of unknown function DUF1579 RB10510 127d97ff53e2d41e5182b2c061d84e9a 229 Gene3D G3DSA:3.40.50.300 1 212 9.9E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10510 127d97ff53e2d41e5182b2c061d84e9a 229 Pfam PF02224 Cytidylate kinase 3 212 1.0E-68 T 11-11-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RB10510 127d97ff53e2d41e5182b2c061d84e9a 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 209 4.8E-62 T 11-11-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RB10510 127d97ff53e2d41e5182b2c061d84e9a 229 Hamap MF_00238 Cytidylate kinase [cmk]. 1 215 30.53 T 11-11-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RB10510 127d97ff53e2d41e5182b2c061d84e9a 229 SUPERFAMILY SSF52540 1 213 2.04E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB539 5de143165e5fcd7741692413de35c949 452 SUPERFAMILY SSF53218 31 238 7.07E-41 T 11-11-2016 IPR001453 MoaB/Mog domain RB539 5de143165e5fcd7741692413de35c949 452 Gene3D G3DSA:3.40.980.10 31 244 1.0E-31 T 11-11-2016 IPR001453 MoaB/Mog domain RB539 5de143165e5fcd7741692413de35c949 452 SMART SM00852 35 207 5.6E-43 T 11-11-2016 IPR001453 MoaB/Mog domain RB539 5de143165e5fcd7741692413de35c949 452 PIRSF PIRSF006728 31 451 7.2E-141 T 11-11-2016 IPR008135 Competence-induced protein CinA RB539 5de143165e5fcd7741692413de35c949 452 Pfam PF00994 Probable molybdopterin binding domain 35 204 1.4E-35 T 11-11-2016 IPR001453 MoaB/Mog domain RB334 dbd1779fb05229024b7322c3e80c6c41 807 Gene3D G3DSA:3.40.50.1000 460 504 9.4E-53 T 11-11-2016 IPR023214 HAD-like domain RB334 dbd1779fb05229024b7322c3e80c6c41 807 Gene3D G3DSA:3.40.50.1000 617 758 9.4E-53 T 11-11-2016 IPR023214 HAD-like domain RB334 dbd1779fb05229024b7322c3e80c6c41 807 SUPERFAMILY SSF81653 290 387 1.01E-26 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 SUPERFAMILY SSF81665 388 483 1.31E-14 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 SUPERFAMILY SSF81665 738 769 1.31E-14 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 SUPERFAMILY SSF81665 251 291 1.31E-14 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 SMART SM00746 18 55 3.1E-9 T 11-11-2016 IPR011017 TRASH domain RB334 dbd1779fb05229024b7322c3e80c6c41 807 Gene3D G3DSA:3.40.1110.10 505 616 4.9E-25 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 712 724 1.9E-26 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 489 503 1.9E-26 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 337 351 1.9E-26 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 646 1.9E-26 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 689 708 1.9E-26 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 625 1.9E-26 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 SUPERFAMILY SSF47240 9 56 3.51E-6 T 11-11-2016 IPR009078 Ferritin-like superfamily RB334 dbd1779fb05229024b7322c3e80c6c41 807 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 491 497 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RB334 dbd1779fb05229024b7322c3e80c6c41 807 SUPERFAMILY SSF56784 487 507 1.21E-56 T 11-11-2016 IPR023214 HAD-like domain RB334 dbd1779fb05229024b7322c3e80c6c41 807 SUPERFAMILY SSF56784 546 796 1.21E-56 T 11-11-2016 IPR023214 HAD-like domain RB334 dbd1779fb05229024b7322c3e80c6c41 807 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 217 798 7.3E-191 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RB334 dbd1779fb05229024b7322c3e80c6c41 807 Pfam PF00122 E1-E2 ATPase 258 480 9.0E-67 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RB334 dbd1779fb05229024b7322c3e80c6c41 807 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 259 767 7.6E-89 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RB334 dbd1779fb05229024b7322c3e80c6c41 807 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 197 799 4.1E-176 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00943 Copper-transporting ATPase signature 472 487 1.4E-7 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00943 Copper-transporting ATPase signature 200 219 1.4E-7 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00943 Copper-transporting ATPase signature 257 276 1.4E-7 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00943 Copper-transporting ATPase signature 410 424 1.4E-7 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 PRINTS PR00943 Copper-transporting ATPase signature 666 683 1.4E-7 T 11-11-2016 RB334 dbd1779fb05229024b7322c3e80c6c41 807 Pfam PF04945 YHS domain 17 56 2.0E-14 T 11-11-2016 IPR007029 YHS domain RB334 dbd1779fb05229024b7322c3e80c6c41 807 Gene3D G3DSA:2.70.150.10 238 387 1.1E-30 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RB334 dbd1779fb05229024b7322c3e80c6c41 807 Pfam PF00702 haloacid dehalogenase-like hydrolase 485 702 4.0E-46 T 11-11-2016 RB6502 55efce9254f99c069f46e16e73937294 379 Pfam PF02687 FtsX-like permease family 256 371 1.1E-16 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB6502 55efce9254f99c069f46e16e73937294 379 Pfam PF12704 MacB-like periplasmic core domain 18 218 5.9E-11 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB6276 0fb2dd0e3d171da90c9826dd23bebf42 105 SUPERFAMILY SSF47729 10 105 5.59E-18 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RB6276 0fb2dd0e3d171da90c9826dd23bebf42 105 SMART SM00411 9 105 9.3E-11 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RB6276 0fb2dd0e3d171da90c9826dd23bebf42 105 Pfam PF00216 Bacterial DNA-binding protein 10 105 1.6E-21 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RB6276 0fb2dd0e3d171da90c9826dd23bebf42 105 Gene3D G3DSA:4.10.520.10 10 105 5.9E-21 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RB12656 070610f2144b34e96cb40981149682a7 511 ProSitePatterns PS01244 Aconitase family signature 2. 442 455 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 Gene3D G3DSA:3.40.1060.10 213 318 4.0E-37 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 Gene3D G3DSA:3.30.499.10 47 203 7.3E-22 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 SUPERFAMILY SSF53732 45 509 1.19E-159 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 Gene3D G3DSA:3.30.499.10 378 509 6.1E-62 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 Gene3D G3DSA:3.30.499.10 337 346 6.1E-62 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 164 177 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 240 253 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 329 343 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 386 397 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 442 455 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 127 140 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 254 267 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 153 161 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 PRINTS PR00415 Aconitase family signature 178 193 3.2E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 46 509 58.998 T 11-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 47 507 3.6E-231 T 11-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 Pfam PF00330 Aconitase family (aconitate hydratase) 52 500 4.5E-151 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB12656 070610f2144b34e96cb40981149682a7 511 ProSitePatterns PS00450 Aconitase family signature 1. 382 398 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RB1321 ca412de2c23cee01d0a16f493dd15fe8 325 Gene3D G3DSA:3.30.420.40 142 303 4.2E-31 T 11-11-2016 RB1321 ca412de2c23cee01d0a16f493dd15fe8 325 SUPERFAMILY SSF53067 5 319 1.73E-52 T 11-11-2016 RB1321 ca412de2c23cee01d0a16f493dd15fe8 325 Pfam PF00480 ROK family 6 318 9.1E-51 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RB1321 ca412de2c23cee01d0a16f493dd15fe8 325 Gene3D G3DSA:3.30.420.40 4 141 1.6E-39 T 11-11-2016 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 Gene3D G3DSA:1.25.40.10 143 365 1.5E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 SUPERFAMILY SSF48452 144 191 5.31E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 SUPERFAMILY SSF48452 328 360 5.31E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 SUPERFAMILY SSF48452 246 282 5.31E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 599 659 2.8E-12 T 11-11-2016 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 802 868 3.2E-10 T 11-11-2016 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 Gene3D G3DSA:2.130.10.130 507 728 2.4E-17 T 11-11-2016 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 Gene3D G3DSA:2.130.10.130 729 945 7.2E-18 T 11-11-2016 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 SUPERFAMILY SSF69318 528 945 2.88E-52 T 11-11-2016 RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 Pfam PF07593 ASPIC and UnbV 966 1036 7.2E-17 T 11-11-2016 IPR011519 ASPIC/UnbV RB3388 49a1ce2538b8498165d7a983ce470aa5 1052 SMART SM00191 587 634 0.0025 T 11-11-2016 IPR013519 Integrin alpha beta-propellor Reactome: R-HSA-216083 RB3487 aab98723fe1288225821526c85590b62 289 Gene3D G3DSA:1.10.10.60 235 283 2.9E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3487 aab98723fe1288225821526c85590b62 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB3487 aab98723fe1288225821526c85590b62 289 Pfam PF12833 Helix-turn-helix domain 205 282 1.4E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3487 aab98723fe1288225821526c85590b62 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 5.6E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB3487 aab98723fe1288225821526c85590b62 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 5.6E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB3487 aab98723fe1288225821526c85590b62 289 SMART SM00342 198 281 1.4E-25 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3487 aab98723fe1288225821526c85590b62 289 SUPERFAMILY SSF46689 235 285 1.12E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3487 aab98723fe1288225821526c85590b62 289 Gene3D G3DSA:1.10.10.60 190 234 6.8E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3487 aab98723fe1288225821526c85590b62 289 Gene3D G3DSA:2.60.120.10 24 77 6.6E-5 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB3267 7500f00acb1e2fadb696457d6b17f01f 432 Gene3D G3DSA:3.20.20.80 82 218 1.5E-7 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB3267 7500f00acb1e2fadb696457d6b17f01f 432 SUPERFAMILY SSF51445 83 183 3.79E-6 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB5747 f7b2dc6504dd444f8a8b729387558815 671 Gene3D G3DSA:3.40.50.620 285 536 2.8E-101 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB5747 f7b2dc6504dd444f8a8b729387558815 671 Gene3D G3DSA:3.40.50.620 110 200 2.8E-101 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB5747 f7b2dc6504dd444f8a8b729387558815 671 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 124 135 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB5747 f7b2dc6504dd444f8a8b729387558815 671 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 671 25.514 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 285 671 1.4E-89 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 Pfam PF05746 DALR anticodon binding domain 544 671 3.5E-27 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RB5747 f7b2dc6504dd444f8a8b729387558815 671 SMART SM01016 5 88 3.5E-26 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 Gene3D G3DSA:3.30.1360.70 2 105 5.2E-27 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 Gene3D G3DSA:1.10.730.10 538 671 2.3E-34 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB5747 f7b2dc6504dd444f8a8b729387558815 671 SMART SM00836 544 671 1.4E-37 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RB5747 f7b2dc6504dd444f8a8b729387558815 671 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 88 1.4E-21 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 SUPERFAMILY SSF55190 10 101 4.45E-20 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 Pfam PF00750 tRNA synthetases class I (R) 97 203 4.8E-34 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 Pfam PF00750 tRNA synthetases class I (R) 303 529 5.0E-57 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 SUPERFAMILY SSF52374 112 200 1.16E-78 T 11-11-2016 RB5747 f7b2dc6504dd444f8a8b729387558815 671 SUPERFAMILY SSF52374 286 536 1.16E-78 T 11-11-2016 RB5747 f7b2dc6504dd444f8a8b729387558815 671 SUPERFAMILY SSF47323 538 671 3.07E-31 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB5747 f7b2dc6504dd444f8a8b729387558815 671 PRINTS PR01038 Arginyl-tRNA synthetase signature 155 168 4.4E-18 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 PRINTS PR01038 Arginyl-tRNA synthetase signature 131 147 4.4E-18 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RB5747 f7b2dc6504dd444f8a8b729387558815 671 PRINTS PR01038 Arginyl-tRNA synthetase signature 116 131 4.4E-18 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RB4160 29d46706c8eb8c2ae05500b8c4e869bc 386 Gene3D G3DSA:3.20.20.70 23 354 1.0E-65 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB4160 29d46706c8eb8c2ae05500b8c4e869bc 386 PIRSF PIRSF004762 2 373 1.3E-109 T 11-11-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 RB4160 29d46706c8eb8c2ae05500b8c4e869bc 386 Pfam PF04055 Radical SAM superfamily 67 239 2.7E-14 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB4160 29d46706c8eb8c2ae05500b8c4e869bc 386 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 23 360 1.0E-152 T 11-11-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 RB4160 29d46706c8eb8c2ae05500b8c4e869bc 386 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 21 364 51.889 T 11-11-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 RB4160 29d46706c8eb8c2ae05500b8c4e869bc 386 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 59 360 2.3E-114 T 11-11-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 RB4160 29d46706c8eb8c2ae05500b8c4e869bc 386 SUPERFAMILY SSF102114 22 354 1.24E-52 T 11-11-2016 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 44 5.9E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 92 110 5.9E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 PIRSF PIRSF006485 20 460 1.1E-145 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 SUPERFAMILY SSF52540 22 186 3.11E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 Pfam PF01926 50S ribosome-binding GTPase 197 315 1.4E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 Pfam PF01926 50S ribosome-binding GTPase 23 139 4.9E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 Gene3D G3DSA:3.40.50.300 194 378 1.4E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 SUPERFAMILY SSF52540 158 455 6.69E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 Hamap MF_00195 GTPase Der [der]. 21 455 34.204 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 22 451 8.3E-153 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 372 451 2.9E-26 T 11-11-2016 IPR032859 GTPase Der, C-terminal KH-domain-like RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 Gene3D G3DSA:3.30.300.20 379 454 5.9E-27 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 195 359 2.7E-25 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 23 178 4.1E-24 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB5619 5b0ccf73b5550c4f4e90e7225c16d90e 472 Gene3D G3DSA:3.40.50.300 24 186 1.5E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13225 12aa392c5f544c484c20b710999230dc 560 SMART SM00487 88 284 1.7E-30 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB13225 12aa392c5f544c484c20b710999230dc 560 Pfam PF16124 RecQ zinc-binding 507 552 6.1E-6 T 11-11-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RB13225 12aa392c5f544c484c20b710999230dc 560 SMART SM00490 323 399 2.8E-21 T 11-11-2016 IPR001650 Helicase, C-terminal RB13225 12aa392c5f544c484c20b710999230dc 560 Pfam PF00270 DEAD/DEAH box helicase 95 256 2.6E-21 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB13225 12aa392c5f544c484c20b710999230dc 560 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 83 418 7.3E-105 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RB13225 12aa392c5f544c484c20b710999230dc 560 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 207 216 - T 11-11-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 RB13225 12aa392c5f544c484c20b710999230dc 560 SUPERFAMILY SSF52540 131 418 3.23E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13225 12aa392c5f544c484c20b710999230dc 560 Gene3D G3DSA:3.40.50.300 79 269 4.0E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13225 12aa392c5f544c484c20b710999230dc 560 Pfam PF00271 Helicase conserved C-terminal domain 297 399 7.1E-15 T 11-11-2016 IPR001650 Helicase, C-terminal RB13225 12aa392c5f544c484c20b710999230dc 560 Gene3D G3DSA:3.40.50.300 509 538 3.4E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13225 12aa392c5f544c484c20b710999230dc 560 Gene3D G3DSA:3.40.50.300 270 427 3.4E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13037 a0268ffd87217393b220443e5a1d64f6 315 PIRSF PIRSF002849 1 314 2.6E-120 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB13037 a0268ffd87217393b220443e5a1d64f6 315 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 45 174 5.2E-60 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB13037 a0268ffd87217393b220443e5a1d64f6 315 SMART SM00382 42 183 9.2E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain RB13037 a0268ffd87217393b220443e5a1d64f6 315 Gene3D G3DSA:1.10.8.300 208 309 1.2E-28 T 11-11-2016 RB13037 a0268ffd87217393b220443e5a1d64f6 315 Gene3D G3DSA:3.40.50.300 28 191 5.4E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13037 a0268ffd87217393b220443e5a1d64f6 315 SUPERFAMILY SSF52540 12 291 6.96E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 SMART SM00220 147 410 1.6E-36 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 153 176 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 Gene3D G3DSA:3.30.200.20 143 253 8.3E-23 T 11-11-2016 RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 SMART SM00091 679 747 16.0 T 11-11-2016 IPR000014 PAS domain RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 SMART SM00091 536 602 0.0015 T 11-11-2016 IPR000014 PAS domain RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 Pfam PF08447 PAS fold 702 788 1.2E-13 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 Pfam PF13188 PAS domain 536 602 4.7E-7 T 11-11-2016 IPR000014 PAS domain RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 532 588 4.0E-9 T 11-11-2016 IPR000014 PAS domain RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 SUPERFAMILY SSF55785 664 789 8.55E-14 T 11-11-2016 IPR000014 PAS domain RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 Gene3D G3DSA:1.10.510.10 254 439 2.7E-31 T 11-11-2016 RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 SUPERFAMILY SSF56112 146 414 6.61E-57 T 11-11-2016 IPR011009 Protein kinase-like domain RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 Gene3D G3DSA:3.30.450.20 662 790 7.0E-22 T 11-11-2016 RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 Gene3D G3DSA:3.30.450.20 524 661 8.1E-15 T 11-11-2016 RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 SUPERFAMILY SSF55785 522 617 5.41E-12 T 11-11-2016 IPR000014 PAS domain RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 264 276 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB2299 91ab0c35a978e9bde9b751aa507ad10c 797 Pfam PF00069 Protein kinase domain 147 401 4.8E-36 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB492 0f840676633b4e26f2e3b4894dad2c14 583 SMART SM00054 347 375 130.0 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB492 0f840676633b4e26f2e3b4894dad2c14 583 SMART SM00054 476 504 16.0 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB492 0f840676633b4e26f2e3b4894dad2c14 583 SMART SM00054 554 582 22.0 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB492 0f840676633b4e26f2e3b4894dad2c14 583 SMART SM00054 267 295 3.1 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB492 0f840676633b4e26f2e3b4894dad2c14 583 Gene3D G3DSA:1.10.238.10 264 305 3.1E-4 T 11-11-2016 IPR011992 EF-hand domain pair RB492 0f840676633b4e26f2e3b4894dad2c14 583 ProSitePatterns PS00018 EF-hand calcium-binding domain. 276 288 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB492 0f840676633b4e26f2e3b4894dad2c14 583 Gene3D G3DSA:1.10.238.10 306 378 2.6E-7 T 11-11-2016 IPR011992 EF-hand domain pair RB492 0f840676633b4e26f2e3b4894dad2c14 583 Gene3D G3DSA:1.10.238.10 472 577 1.5E-6 T 11-11-2016 IPR011992 EF-hand domain pair RB492 0f840676633b4e26f2e3b4894dad2c14 583 Pfam PF13202 EF hand 271 288 0.055 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB492 0f840676633b4e26f2e3b4894dad2c14 583 SUPERFAMILY SSF47473 340 375 5.11E-12 T 11-11-2016 IPR011992 EF-hand domain pair RB492 0f840676633b4e26f2e3b4894dad2c14 583 SUPERFAMILY SSF47473 269 295 5.11E-12 T 11-11-2016 IPR011992 EF-hand domain pair RB492 0f840676633b4e26f2e3b4894dad2c14 583 SUPERFAMILY SSF47473 466 552 5.11E-12 T 11-11-2016 IPR011992 EF-hand domain pair RB492 0f840676633b4e26f2e3b4894dad2c14 583 ProSitePatterns PS00018 EF-hand calcium-binding domain. 356 368 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB11090 89a7e5b075abbafdedb9c412af8bb0f6 382 SUPERFAMILY SSF52172 8 133 3.56E-25 T 11-11-2016 IPR011006 CheY-like superfamily RB11090 89a7e5b075abbafdedb9c412af8bb0f6 382 Pfam PF00072 Response regulator receiver domain 9 120 1.3E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11090 89a7e5b075abbafdedb9c412af8bb0f6 382 Gene3D G3DSA:3.40.50.2300 8 134 5.6E-29 T 11-11-2016 RB11090 89a7e5b075abbafdedb9c412af8bb0f6 382 SMART SM00448 7 119 2.6E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 SMART SM00382 33 222 1.1E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 SMART SM00382 288 483 8.9E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 SUPERFAMILY SSF52540 259 495 2.27E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 SUPERFAMILY SSF52540 8 235 4.02E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 Pfam PF00005 ABC transporter 280 434 3.0E-17 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 Pfam PF00005 ABC transporter 24 174 4.8E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 Gene3D G3DSA:3.40.50.300 256 500 2.9E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3496 5f9154e3255acfcf38b5b1ee8615a785 511 Gene3D G3DSA:3.40.50.300 6 239 3.3E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6808 0023277555d7d439eff0af2b73a186e2 202 SUPERFAMILY SSF51230 55 187 9.03E-25 T 11-11-2016 IPR011053 Single hybrid motif RB6808 0023277555d7d439eff0af2b73a186e2 202 Gene3D G3DSA:2.40.50.100 58 188 2.2E-28 T 11-11-2016 RB6808 0023277555d7d439eff0af2b73a186e2 202 Pfam PF01597 Glycine cleavage H-protein 83 187 1.7E-20 T 11-11-2016 IPR002930 Glycine cleavage system H-protein RB5154 a82c6fec356febdec9398e8794956197 727 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 187 246 1.3E-16 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RB5154 a82c6fec356febdec9398e8794956197 727 Pfam PF00717 Peptidase S24-like 186 242 2.3E-11 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B RB5154 a82c6fec356febdec9398e8794956197 727 SUPERFAMILY SSF51306 187 241 6.8E-22 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RB5154 a82c6fec356febdec9398e8794956197 727 SUPERFAMILY SSF51306 110 129 6.8E-22 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RB5154 a82c6fec356febdec9398e8794956197 727 SUPERFAMILY SSF51306 592 723 2.09E-11 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RB5154 a82c6fec356febdec9398e8794956197 727 Gene3D G3DSA:2.10.109.10 187 231 2.2E-38 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RB5154 a82c6fec356febdec9398e8794956197 727 Gene3D G3DSA:2.10.109.10 645 711 2.2E-38 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RB5154 a82c6fec356febdec9398e8794956197 727 Gene3D G3DSA:2.10.109.10 108 129 2.2E-38 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RB5154 a82c6fec356febdec9398e8794956197 727 ProSitePatterns PS00760 Signal peptidases I lysine active site. 223 235 - T 11-11-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RB9168 b7499fe7c0c97ceec69e8a434aa22422 330 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 311 2.8E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9168 b7499fe7c0c97ceec69e8a434aa22422 330 PRINTS PR01713 Nucleotide sugar epimerase signature 222 237 5.1E-18 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RB9168 b7499fe7c0c97ceec69e8a434aa22422 330 PRINTS PR01713 Nucleotide sugar epimerase signature 243 258 5.1E-18 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RB9168 b7499fe7c0c97ceec69e8a434aa22422 330 PRINTS PR01713 Nucleotide sugar epimerase signature 283 300 5.1E-18 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RB9168 b7499fe7c0c97ceec69e8a434aa22422 330 PRINTS PR01713 Nucleotide sugar epimerase signature 35 51 5.1E-18 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RB9168 b7499fe7c0c97ceec69e8a434aa22422 330 SUPERFAMILY SSF51735 6 323 1.52E-90 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9168 b7499fe7c0c97ceec69e8a434aa22422 330 Gene3D G3DSA:3.90.25.10 205 320 5.5E-25 T 11-11-2016 RB9168 b7499fe7c0c97ceec69e8a434aa22422 330 Gene3D G3DSA:3.40.50.720 7 204 1.1E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9629 964b5794bf9a9bb3e1b26afff627bc7f 330 PRINTS PR00075 Fatty acid desaturase family 1 signature 79 99 4.6E-11 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB9629 964b5794bf9a9bb3e1b26afff627bc7f 330 PRINTS PR00075 Fatty acid desaturase family 1 signature 56 78 4.6E-11 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB9629 964b5794bf9a9bb3e1b26afff627bc7f 330 PRINTS PR00075 Fatty acid desaturase family 1 signature 116 145 4.6E-11 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB9629 964b5794bf9a9bb3e1b26afff627bc7f 330 Pfam PF00487 Fatty acid desaturase 63 291 1.7E-15 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 528 2.3E-175 T 11-11-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 Gene3D G3DSA:3.40.50.720 2 106 4.7E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 SUPERFAMILY SSF55021 443 527 4.58E-14 T 11-11-2016 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 Pfam PF01842 ACT domain 456 518 1.0E-9 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 314 6.6E-30 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 SUPERFAMILY SSF51735 98 283 8.86E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 SUPERFAMILY SSF52283 1 136 9.83E-34 T 11-11-2016 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 Gene3D G3DSA:3.30.1330.90 319 445 4.4E-27 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 282 4.0E-59 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 SUPERFAMILY SSF143548 320 448 9.15E-24 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 Gene3D G3DSA:3.40.50.720 107 284 9.8E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6248 fe0eeb9d2ced8711ada8e069158890a5 540 Gene3D G3DSA:3.30.70.260 446 527 1.4E-17 T 11-11-2016 RB3784 450e318662c77292447b642994c01d3d 151 Gene3D G3DSA:3.40.50.2300 16 142 6.2E-33 T 11-11-2016 RB3784 450e318662c77292447b642994c01d3d 151 Pfam PF00072 Response regulator receiver domain 17 128 1.1E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3784 450e318662c77292447b642994c01d3d 151 SMART SM00448 15 127 4.3E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3784 450e318662c77292447b642994c01d3d 151 SUPERFAMILY SSF52172 15 134 6.55E-28 T 11-11-2016 IPR011006 CheY-like superfamily RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 SMART SM00878 365 472 4.9E-52 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Pfam PF02785 Biotin carboxylase C-terminal domain 365 472 3.0E-32 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 20 1166 0.0 T 11-11-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Pfam PF00682 HMGL-like 556 826 1.4E-25 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 309 316 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Gene3D G3DSA:1.10.10.60 972 1008 3.1E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 SUPERFAMILY SSF56059 100 356 9.37E-65 T 11-11-2016 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Pfam PF02436 Conserved carboxylase domain 850 1049 1.8E-68 T 11-11-2016 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Pfam PF00364 Biotin-requiring enzyme 1100 1164 1.2E-17 T 11-11-2016 IPR000089 Biotin/lipoyl attachment RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1122 1139 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Gene3D G3DSA:3.40.50.20 18 146 2.3E-44 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 170 184 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 SUPERFAMILY SSF51230 1090 1166 1.31E-21 T 11-11-2016 IPR011053 Single hybrid motif RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 SUPERFAMILY SSF51246 361 478 3.09E-36 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Gene3D G3DSA:2.40.50.100 1091 1165 2.0E-24 T 11-11-2016 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Gene3D G3DSA:3.30.470.20 221 477 5.6E-94 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Pfam PF00289 Biotin carboxylase, N-terminal domain 18 126 1.1E-38 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 PIRSF PIRSF001594 13 1166 0.0 T 11-11-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Gene3D G3DSA:3.20.20.70 533 840 4.6E-127 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 SUPERFAMILY SSF51569 546 857 1.04E-77 T 11-11-2016 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Gene3D G3DSA:3.10.600.10 1009 1086 1.5E-35 T 11-11-2016 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 SUPERFAMILY SSF52440 12 130 1.51E-42 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Gene3D G3DSA:3.30.1490.20 147 219 3.4E-27 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 SUPERFAMILY SSF89000 854 1030 1.73E-51 T 11-11-2016 RB10592 20ced2ea1a7ea511a9049ed28a58e61d 1166 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 132 345 1.7E-71 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:1.25.40.10 1144 1177 3.7E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:1.25.40.10 918 1019 3.7E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF47384 1418 1499 1.29E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1621 1639 6.2E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1586 1600 6.2E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1604 1614 6.2E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF48452 745 818 1.09E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF48452 934 998 1.09E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:1.25.40.10 1035 1095 2.8E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:1.25.40.10 743 813 2.8E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SMART SM00028 1143 1176 21.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SMART SM00028 684 717 190.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SMART SM00028 1051 1084 41.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SMART SM00028 780 813 0.33 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Pfam PF00072 Response regulator receiver domain 1695 1806 6.8E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Pfam PF01627 Hpt domain 1899 1968 9.9E-9 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:3.40.50.300 424 491 7.4E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:3.40.50.300 301 363 7.4E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SMART SM00387 1545 1661 9.3E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:3.30.200.20 7 116 4.1E-5 T 11-11-2016 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SMART SM00448 1693 1806 6.8E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:1.10.287.130 1424 1494 1.7E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:3.30.450.40 1232 1383 1.6E-6 T 11-11-2016 IPR029016 GAF domain-like RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Pfam PF00069 Protein kinase domain 18 265 8.7E-20 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1546 1658 7.1E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1431 1497 3.2E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF56112 12 268 1.22E-35 T 11-11-2016 IPR011009 Protein kinase-like domain RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SMART SM00220 17 278 1.2E-11 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF52540 295 553 2.0E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF47226 1886 1975 2.49E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF48452 1135 1172 1.49E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF48452 1049 1092 1.49E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF48452 945 1012 1.49E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:3.30.565.10 1511 1656 1.7E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SMART SM00388 1431 1498 1.4E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF52172 1692 1808 5.41E-35 T 11-11-2016 IPR011006 CheY-like superfamily RB3373 2963d825115d0fbee3bac2045fc6affb 1998 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 134 146 - T 11-11-2016 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Pfam PF13191 AAA ATPase domain 302 481 1.3E-21 T 11-11-2016 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:1.20.120.160 1886 1975 5.2E-15 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF55874 1487 1657 2.62E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3373 2963d825115d0fbee3bac2045fc6affb 1998 SUPERFAMILY SSF55781 1232 1387 2.9E-10 T 11-11-2016 IPR029016 GAF domain-like RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:3.40.50.2300 1691 1808 4.5E-36 T 11-11-2016 RB3373 2963d825115d0fbee3bac2045fc6affb 1998 Gene3D G3DSA:1.10.510.10 117 271 2.0E-22 T 11-11-2016 RB12734 5537d32a2b9960b3f86d7234536b12ff 567 Pfam PF07587 Protein of unknown function (DUF1553) 316 538 7.4E-29 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB12734 5537d32a2b9960b3f86d7234536b12ff 567 Pfam PF07583 Protein of unknown function (DUF1549) 51 248 1.2E-45 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB6426 7d6f90c31973570875ed9dec378d9528 442 Pfam PF13480 Acetyltransferase (GNAT) domain 228 381 2.0E-29 T 11-11-2016 RB6426 7d6f90c31973570875ed9dec378d9528 442 SUPERFAMILY SSF55729 208 394 1.36E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 Pfam PF00404 Dockerin type I repeat 1600 1620 8.3E-7 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 Pfam PF00404 Dockerin type I repeat 1559 1578 5.3E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 141 221 1.5E-12 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 Gene3D G3DSA:2.60.120.380 133 233 1.9E-5 T 11-11-2016 RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 Gene3D G3DSA:2.60.40.10 520 585 7.8E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 SUPERFAMILY SSF89260 133 233 2.88E-5 T 11-11-2016 RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 Gene3D G3DSA:1.10.1330.10 1558 1620 5.1E-5 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 SUPERFAMILY SSF117074 616 668 2.35E-5 T 11-11-2016 RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 Pfam PF07595 Planctomycete extracellular 38 60 1.0E-4 T 11-11-2016 IPR011506 Planctomycete extracellular RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 SUPERFAMILY SSF55486 338 442 1.33E-5 T 11-11-2016 RB12697 5d50aa92c931fd3fe046e6b6e477bc8b 1703 SUPERFAMILY SSF63446 1558 1623 8.14E-8 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB481 5e9169f85e4b79cf9dd11b51529de282 1134 Pfam PF07619 Protein of unknown function (DUF1581) 384 467 1.3E-30 T 11-11-2016 IPR022660 Domain of unknown function DUF1581 RB481 5e9169f85e4b79cf9dd11b51529de282 1134 Pfam PF07622 Protein of unknown function (DUF1583) 486 873 3.1E-160 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB13298 8c462491fbe002d5eb5f19f570b12553 482 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 161 186 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RB13298 8c462491fbe002d5eb5f19f570b12553 482 Pfam PF00474 Sodium:solute symporter family 46 435 1.2E-20 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF141072 2672 2788 3.14E-22 T 11-11-2016 RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Pfam PF00404 Dockerin type I repeat 2940 2960 2.2E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 1081 1266 1.02E-8 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 1865 2036 7.53E-7 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 947 971 2600.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 912 943 1200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1876 1902 5100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2115 2136 25.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 250 271 760.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1535 1556 1500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 160 185 2900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1668 1694 1300.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1933 1962 770.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2498 2518 2500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 363 392 490.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 975 996 2500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 545 566 100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 997 1031 5900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1730 1768 910.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2520 2546 2000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 306 332 5100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2551 2571 6800.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1820 1841 760.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1178 1236 7200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2263 2284 860.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2410 2465 3700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1122 1143 2200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1089 1118 2200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 217 246 4400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1032 1064 4200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2382 2406 3200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1469 1500 2600.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 628 653 3100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2198 2236 5100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 2137 2171 380.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00710 1695 1729 6000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 2140 2301 7.43E-9 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 2457 2662 2.45E-17 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 2308 2447 2.93E-10 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 457 681 7.01E-7 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SMART SM00237 2655 2765 0.0069 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 295 461 4.46E-12 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 77 238 4.46E-12 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 1777 1950 2.6E-15 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 797 1074 2.1E-18 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 1598 1772 4.6E-15 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 500 652 2.1E-8 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 2308 2435 2.0E-13 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 1954 2147 8.2E-8 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 2148 2301 3.4E-13 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 1443 1597 4.6E-13 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 1079 1277 2.5E-14 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 76 379 1.9E-23 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 Gene3D G3DSA:2.160.20.10 2441 2662 9.1E-26 T 11-11-2016 IPR012334 Pectin lyase fold RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 1719 1848 1.51E-13 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 1648 1689 1.51E-13 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 1415 1689 4.93E-13 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 903 1102 4.71E-15 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4375 4c0be1573cb7b9969229a0bbccdee172 3056 SUPERFAMILY SSF51126 794 874 4.71E-15 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 SUPERFAMILY SSF52540 194 382 1.64E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 SUPERFAMILY SSF52540 101 158 1.64E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Gene3D G3DSA:3.40.50.300 299 389 3.8E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 284 1.3E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Pfam PF12631 MnmE helical domain 129 462 1.5E-45 T 11-11-2016 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 SUPERFAMILY SSF103025 7 126 5.41E-21 T 11-11-2016 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 SUPERFAMILY SSF116878 127 226 3.4E-37 T 11-11-2016 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 SUPERFAMILY SSF116878 390 465 3.4E-37 T 11-11-2016 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 126 2.8E-21 T 11-11-2016 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Gene3D G3DSA:1.20.120.430 395 465 3.9E-46 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Gene3D G3DSA:1.20.120.430 245 277 3.9E-46 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Gene3D G3DSA:1.20.120.430 128 188 3.9E-46 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Gene3D G3DSA:3.30.1360.120 4 127 6.5E-22 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Pfam PF01926 50S ribosome-binding GTPase 224 344 5.0E-17 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB11877 7fe4533b4712c5ced0b27a7123356d5a 465 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 465 24.364 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 RB2647 3e305cd82d235e37954eb9048ae611d0 257 SUPERFAMILY SSF49503 95 197 2.95E-15 T 11-11-2016 IPR008972 Cupredoxin RB2647 3e305cd82d235e37954eb9048ae611d0 257 Gene3D G3DSA:2.60.40.420 93 181 1.3E-10 T 11-11-2016 IPR008972 Cupredoxin RB5825 7765c98eec919e3b1add1346576bc02f 295 Gene3D G3DSA:3.40.50.1820 46 287 6.1E-44 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5825 7765c98eec919e3b1add1346576bc02f 295 Pfam PF01738 Dienelactone hydrolase family 76 287 1.0E-45 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 RB5825 7765c98eec919e3b1add1346576bc02f 295 SUPERFAMILY SSF53474 49 287 7.8E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 SUPERFAMILY SSF50447 172 294 8.94E-29 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Gene3D G3DSA:3.30.70.870 299 375 8.9E-23 T 11-11-2016 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Pfam PF03144 Elongation factor Tu domain 2 212 281 1.9E-12 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Gene3D G3DSA:3.40.50.300 7 199 6.1E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Pfam PF06421 GTP-binding protein LepA C-terminus 495 600 3.0E-48 T 11-11-2016 IPR013842 GTP-binding protein LepA, C-terminal RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 TIGRFAM TIGR01393 lepA: elongation factor 4 11 601 4.1E-266 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 SUPERFAMILY SSF54980 298 377 3.45E-16 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 PRINTS PR00315 GTP-binding elongation factor signature 81 91 6.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 PRINTS PR00315 GTP-binding elongation factor signature 57 65 6.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 PRINTS PR00315 GTP-binding elongation factor signature 97 108 6.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 PRINTS PR00315 GTP-binding elongation factor signature 133 142 6.0E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Gene3D G3DSA:3.30.70.240 409 497 3.6E-19 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 SMART SM00838 409 494 0.0037 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Hamap MF_00071 Elongation factor 4 [lepA]. 1 604 255.126 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 SUPERFAMILY SSF54980 407 501 8.15E-24 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Gene3D G3DSA:2.40.30.10 200 295 1.6E-22 T 11-11-2016 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Pfam PF00009 Elongation factor Tu GTP binding domain 11 188 9.8E-52 T 11-11-2016 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 182 2.7E-21 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 SUPERFAMILY SSF52540 8 194 4.64E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1630 e68548681a9fab7dbfdbef2473ba6eb9 604 Pfam PF00679 Elongation factor G C-terminus 407 492 2.6E-21 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB1610 623d264a67755098e0fe7eb09badc46a 541 Pfam PF00884 Sulfatase 33 427 1.4E-81 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB1610 623d264a67755098e0fe7eb09badc46a 541 Gene3D G3DSA:3.40.720.10 31 449 4.0E-123 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1610 623d264a67755098e0fe7eb09badc46a 541 Gene3D G3DSA:3.30.1120.10 458 528 7.1E-21 T 11-11-2016 RB1610 623d264a67755098e0fe7eb09badc46a 541 SUPERFAMILY SSF53649 32 524 2.33E-142 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 Gene3D G3DSA:1.10.275.10 3 147 9.6E-52 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 SUPERFAMILY SSF48557 3 470 2.67E-132 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 Gene3D G3DSA:1.20.200.10 148 413 3.8E-87 T 11-11-2016 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 PRINTS PR00149 Fumarate lyase superfamily signature 189 207 7.2E-28 T 11-11-2016 IPR000362 Fumarate lyase family RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 7.2E-28 T 11-11-2016 IPR000362 Fumarate lyase family RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 PRINTS PR00149 Fumarate lyase superfamily signature 280 307 7.2E-28 T 11-11-2016 IPR000362 Fumarate lyase family RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 PRINTS PR00149 Fumarate lyase superfamily signature 326 342 7.2E-28 T 11-11-2016 IPR000362 Fumarate lyase family RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 PRINTS PR00145 Argininosuccinate lyase family signature 326 342 4.1E-5 T 11-11-2016 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 PRINTS PR00145 Argininosuccinate lyase family signature 184 204 4.1E-5 T 11-11-2016 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 PRINTS PR00145 Argininosuccinate lyase family signature 142 164 4.1E-5 T 11-11-2016 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 472 72.343 T 11-11-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 ProSitePatterns PS00163 Fumarate lyases signature. 326 335 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 Pfam PF00206 Lyase 12 351 4.6E-91 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 Pfam PF10415 Fumarase C C-terminus 419 470 4.5E-18 T 11-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RB7623 f7f028295fadb8c4df3bc440d6a1a77a 474 Gene3D G3DSA:1.10.40.30 419 473 9.8E-20 T 11-11-2016 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SUPERFAMILY SSF52172 740 860 1.85E-31 T 11-11-2016 IPR011006 CheY-like superfamily RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00091 327 393 2.6E-6 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00091 201 268 7.2 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00091 76 142 2.8 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Pfam PF08448 PAS fold 85 191 2.6E-14 T 11-11-2016 IPR013656 PAS fold-4 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Pfam PF08448 PAS fold 334 449 1.0E-10 T 11-11-2016 IPR013656 PAS fold-4 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Pfam PF08448 PAS fold 207 316 6.2E-15 T 11-11-2016 IPR013656 PAS fold-4 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 674 9.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 9.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 635 9.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 693 9.5E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 2.0E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Gene3D G3DSA:3.40.50.2300 739 860 1.1E-32 T 11-11-2016 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SUPERFAMILY SSF47384 454 535 1.22E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00448 739 855 2.0E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Gene3D G3DSA:3.30.450.20 88 193 1.3E-14 T 11-11-2016 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SUPERFAMILY SSF55874 523 692 4.45E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SUPERFAMILY SSF55785 89 198 1.64E-12 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Gene3D G3DSA:3.30.565.10 538 693 2.5E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SUPERFAMILY SSF55785 186 313 1.27E-18 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00086 147 189 19.0 T 11-11-2016 IPR001610 PAC motif RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00086 402 449 15.0 T 11-11-2016 IPR001610 PAC motif RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00086 273 315 3.8 T 11-11-2016 IPR001610 PAC motif RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Gene3D G3DSA:1.10.287.130 461 530 2.7E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SUPERFAMILY SSF55785 312 447 7.33E-18 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Pfam PF00072 Response regulator receiver domain 741 855 1.3E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 694 1.3E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Gene3D G3DSA:3.30.450.20 194 312 3.6E-20 T 11-11-2016 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 Gene3D G3DSA:3.30.450.20 313 447 7.0E-19 T 11-11-2016 RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00387 581 696 7.1E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 86 195 1.8E-8 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 456 2.1E-9 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 197 322 4.7E-9 T 11-11-2016 IPR000014 PAS domain RB7474 fecde01c24eb1993b2ed3cfff9e10bdf 865 SMART SM00388 469 534 1.8E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB5986 136b62ce9f23702822f8c33e24b39781 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 300 9.5E-51 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RB5986 136b62ce9f23702822f8c33e24b39781 313 Gene3D G3DSA:3.40.50.1370 2 138 1.6E-47 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 281 292 5.1E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 5.1E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 46 60 5.1E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 5.1E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 5.1E-22 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB5986 136b62ce9f23702822f8c33e24b39781 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 142 7.5E-42 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RB5986 136b62ce9f23702822f8c33e24b39781 313 SUPERFAMILY SSF53671 2 303 1.2E-92 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 290 4.5E-23 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 264 4.5E-23 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 4.5E-23 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB5986 136b62ce9f23702822f8c33e24b39781 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 4.5E-23 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB5986 136b62ce9f23702822f8c33e24b39781 313 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 303 72.024 T 11-11-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RB5986 136b62ce9f23702822f8c33e24b39781 313 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 302 3.2E-105 T 11-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB5986 136b62ce9f23702822f8c33e24b39781 313 Gene3D G3DSA:3.40.50.1370 139 289 4.0E-53 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 Gene3D G3DSA:3.50.50.60 9 139 4.0E-12 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 SUPERFAMILY SSF51905 8 287 2.97E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 Gene3D G3DSA:3.40.50.720 140 190 3.9E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 12 314 3.6E-94 T 11-11-2016 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 4.4E-8 T 11-11-2016 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 4.4E-8 T 11-11-2016 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 4.4E-8 T 11-11-2016 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 196 5.4E-9 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 5.4E-9 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB13090 c6e4b7a6c93b16ae258be36d9dee3c0f 374 Gene3D G3DSA:3.50.50.60 191 319 1.5E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 SUPERFAMILY SSF52518 609 827 5.89E-47 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 SUPERFAMILY SSF52518 192 569 5.4E-77 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 Gene3D G3DSA:3.40.50.970 191 558 4.4E-67 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 Pfam PF02779 Transketolase, pyrimidine binding domain 626 820 1.4E-59 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 Pfam PF00676 Dehydrogenase E1 component 242 555 1.7E-51 T 11-11-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 SMART SM00861 627 820 4.4E-58 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 15 47 5.9E-10 T 11-11-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 825 965 1.9E-37 T 11-11-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 121 964 0.0 T 11-11-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 Gene3D G3DSA:3.40.50.970 626 825 3.3E-21 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB9078 71c3cf1beac0fae02fc66f1af6852b97 969 PIRSF PIRSF000157 2 967 0.0 T 11-11-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RB6530 3bf16bdfc15d10bd0d7b3d59920e674a 237 Gene3D G3DSA:1.10.10.10 3 99 7.0E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6530 3bf16bdfc15d10bd0d7b3d59920e674a 237 SUPERFAMILY SSF46785 97 174 1.64E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6530 3bf16bdfc15d10bd0d7b3d59920e674a 237 SUPERFAMILY SSF46785 15 94 1.2E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6530 3bf16bdfc15d10bd0d7b3d59920e674a 237 Hamap MF_01584 UPF0502 protein YceH [yceH]. 17 237 26.258 T 11-11-2016 IPR007432 Protein of unknown function DUF480 RB6530 3bf16bdfc15d10bd0d7b3d59920e674a 237 Gene3D G3DSA:1.10.10.10 104 174 1.1E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6530 3bf16bdfc15d10bd0d7b3d59920e674a 237 Pfam PF04337 Protein of unknown function, DUF480 17 156 1.0E-47 T 11-11-2016 IPR007432 Protein of unknown function DUF480 RB3023 65c89c508166090a3246cf33b9c72aa6 155 SMART SM00228 61 137 3.6E-5 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB3023 65c89c508166090a3246cf33b9c72aa6 155 Pfam PF13180 PDZ domain 64 146 4.5E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB3023 65c89c508166090a3246cf33b9c72aa6 155 Gene3D G3DSA:2.30.42.10 68 147 3.6E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB3023 65c89c508166090a3246cf33b9c72aa6 155 SUPERFAMILY SSF50156 62 146 9.73E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11817 ade9986a3c34d19ffae63e9d51794451 937 SMART SM00382 543 734 0.0011 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11817 ade9986a3c34d19ffae63e9d51794451 937 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 21 194 7.0E-20 T 11-11-2016 IPR025199 DNA translocase FtsK, 4TM region RB11817 ade9986a3c34d19ffae63e9d51794451 937 Pfam PF01580 FtsK/SpoIIIE family 507 712 1.5E-53 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RB11817 ade9986a3c34d19ffae63e9d51794451 937 SUPERFAMILY SSF52540 481 785 1.54E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11817 ade9986a3c34d19ffae63e9d51794451 937 SMART SM00843 818 883 4.7E-29 T 11-11-2016 IPR018541 FtsK gamma domain RB11817 ade9986a3c34d19ffae63e9d51794451 937 Gene3D G3DSA:3.40.50.300 482 778 1.1E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11817 ade9986a3c34d19ffae63e9d51794451 937 SUPERFAMILY SSF46785 820 885 7.07E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11817 ade9986a3c34d19ffae63e9d51794451 937 Pfam PF09397 Ftsk gamma domain 820 880 2.9E-24 T 11-11-2016 IPR018541 FtsK gamma domain RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 Gene3D G3DSA:3.30.70.260 361 407 1.1E-5 T 11-11-2016 RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 Pfam PF01842 ACT domain 362 435 4.8E-10 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 Gene3D G3DSA:3.40.50.720 12 158 3.7E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 SUPERFAMILY SSF55347 147 312 1.57E-47 T 11-11-2016 RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 193 215 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 PIRSF PIRSF000098 11 448 1.5E-162 T 11-11-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 SUPERFAMILY SSF55021 361 437 9.58E-9 T 11-11-2016 RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 Gene3D G3DSA:3.30.360.10 159 308 2.0E-49 T 11-11-2016 RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 20 139 2.4E-17 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 SUPERFAMILY SSF51735 14 168 9.2E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8510 8716a2b80b4e04e1d5083e39156ac36b 448 Pfam PF00742 Homoserine dehydrogenase 147 325 3.8E-58 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RB1538 b8f690746e43b104615e1d968eb2418a 489 Gene3D G3DSA:2.40.37.10 338 487 2.6E-29 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB1538 b8f690746e43b104615e1d968eb2418a 489 Gene3D G3DSA:2.40.37.10 279 292 2.6E-29 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB1538 b8f690746e43b104615e1d968eb2418a 489 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 114 126 2.2E-5 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB1538 b8f690746e43b104615e1d968eb2418a 489 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 228 241 2.2E-5 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB1538 b8f690746e43b104615e1d968eb2418a 489 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 356 375 2.2E-5 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB1538 b8f690746e43b104615e1d968eb2418a 489 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 268 281 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RB1538 b8f690746e43b104615e1d968eb2418a 489 SUPERFAMILY SSF50621 351 474 5.44E-12 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB1538 b8f690746e43b104615e1d968eb2418a 489 SUPERFAMILY SSF51419 325 369 7.56E-39 T 11-11-2016 IPR029066 PLP-binding barrel RB1538 b8f690746e43b104615e1d968eb2418a 489 SUPERFAMILY SSF51419 70 287 7.56E-39 T 11-11-2016 IPR029066 PLP-binding barrel RB1538 b8f690746e43b104615e1d968eb2418a 489 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 77 291 8.2E-20 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RB1538 b8f690746e43b104615e1d968eb2418a 489 Gene3D G3DSA:3.20.20.10 72 278 2.4E-31 T 11-11-2016 IPR029066 PLP-binding barrel RB11690 4b3928e706bd252160893f603578af59 1238 PRINTS PR00906 SecA protein signature 350 372 2.0E-62 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11690 4b3928e706bd252160893f603578af59 1238 PRINTS PR00906 SecA protein signature 387 404 2.0E-62 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11690 4b3928e706bd252160893f603578af59 1238 PRINTS PR00906 SecA protein signature 121 135 2.0E-62 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11690 4b3928e706bd252160893f603578af59 1238 PRINTS PR00906 SecA protein signature 83 107 2.0E-62 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11690 4b3928e706bd252160893f603578af59 1238 PRINTS PR00906 SecA protein signature 137 147 2.0E-62 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11690 4b3928e706bd252160893f603578af59 1238 PRINTS PR00906 SecA protein signature 190 210 2.0E-62 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11690 4b3928e706bd252160893f603578af59 1238 PRINTS PR00906 SecA protein signature 424 437 2.0E-62 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11690 4b3928e706bd252160893f603578af59 1238 Pfam PF07516 SecA Wing and Scaffold domain 689 943 1.9E-25 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Pfam PF07516 SecA Wing and Scaffold domain 1032 1149 2.6E-26 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Pfam PF02810 SEC-C motif 1217 1235 1.6E-8 T 11-11-2016 IPR004027 SEC-C motif RB11690 4b3928e706bd252160893f603578af59 1238 SUPERFAMILY SSF81886 692 806 3.79E-23 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 SUPERFAMILY SSF81767 256 379 1.2E-44 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 SUPERFAMILY SSF52540 500 690 1.77E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:3.40.50.300 508 691 4.2E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:3.40.50.300 430 460 4.2E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11690 4b3928e706bd252160893f603578af59 1238 SMART SM00957 26 413 1.7E-261 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 ProSitePatterns PS01312 SecA family signature. 558 573 - T 11-11-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RB11690 4b3928e706bd252160893f603578af59 1238 Pfam PF07517 SecA DEAD-like domain 27 413 1.3E-122 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 SMART SM00958 257 369 1.8E-61 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:3.40.50.300 23 257 3.2E-116 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:3.40.50.300 380 427 3.2E-116 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:3.90.1440.10 264 379 9.4E-48 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:1.10.3060.10 1071 1150 2.1E-37 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:1.10.3060.10 887 938 2.1E-37 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:1.10.3060.10 720 814 9.2E-18 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Gene3D G3DSA:1.10.3060.10 815 875 4.5E-4 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Pfam PF01043 SecA preprotein cross-linking domain 265 369 2.9E-38 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 SUPERFAMILY SSF81886 1213 1225 7.72E-30 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 SUPERFAMILY SSF81886 1038 1160 7.72E-30 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RB11690 4b3928e706bd252160893f603578af59 1238 Hamap MF_01382 Protein translocase subunit SecA [secA]. 25 1152 19.967 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RB11690 4b3928e706bd252160893f603578af59 1238 SUPERFAMILY SSF52540 27 257 2.83E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11690 4b3928e706bd252160893f603578af59 1238 SUPERFAMILY SSF52540 379 426 2.83E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4143 0971bf7da033bf7f7c96281c42d96348 499 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 481 1.2E-177 T 11-11-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RB4143 0971bf7da033bf7f7c96281c42d96348 499 Pfam PF01425 Amidase 21 473 2.4E-155 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RB4143 0971bf7da033bf7f7c96281c42d96348 499 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 8 484 95.371 T 11-11-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RB4143 0971bf7da033bf7f7c96281c42d96348 499 SUPERFAMILY SSF75304 3 491 1.7E-158 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RB4143 0971bf7da033bf7f7c96281c42d96348 499 Gene3D G3DSA:3.90.1300.10 4 493 8.7E-175 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RB4143 0971bf7da033bf7f7c96281c42d96348 499 ProSitePatterns PS00571 Amidases signature. 149 180 - T 11-11-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 RB8323 6797c903043de7339f7398b0226041c2 687 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 8 685 3.3E-248 T 11-11-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 RB8323 6797c903043de7339f7398b0226041c2 687 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 150 168 2.0E-52 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RB8323 6797c903043de7339f7398b0226041c2 687 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 231 245 2.0E-52 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RB8323 6797c903043de7339f7398b0226041c2 687 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 26 39 2.0E-52 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RB8323 6797c903043de7339f7398b0226041c2 687 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 180 197 2.0E-52 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RB8323 6797c903043de7339f7398b0226041c2 687 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 63 82 2.0E-52 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RB8323 6797c903043de7339f7398b0226041c2 687 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 131 147 2.0E-52 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RB8323 6797c903043de7339f7398b0226041c2 687 PIRSF PIRSF005419 1 687 1.8E-237 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RB8323 6797c903043de7339f7398b0226041c2 687 Pfam PF00771 FHIPEP family 20 677 6.2E-252 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 RB12994 0dafa602077ed54a26d9e67d3384bc10 620 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 537 548 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB12994 0dafa602077ed54a26d9e67d3384bc10 620 Gene3D G3DSA:3.30.70.20 517 544 2.7E-15 T 11-11-2016 RB12994 0dafa602077ed54a26d9e67d3384bc10 620 SUPERFAMILY SSF54862 459 607 5.19E-37 T 11-11-2016 RB12994 0dafa602077ed54a26d9e67d3384bc10 620 SUPERFAMILY SSF51206 32 100 1.04E-16 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like RB12994 0dafa602077ed54a26d9e67d3384bc10 620 SUPERFAMILY SSF51206 170 225 1.04E-16 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like RB12994 0dafa602077ed54a26d9e67d3384bc10 620 Gene3D G3DSA:3.30.70.20 462 516 1.8E-9 T 11-11-2016 RB12994 0dafa602077ed54a26d9e67d3384bc10 620 Gene3D G3DSA:3.30.70.20 545 605 1.6E-11 T 11-11-2016 RB12994 0dafa602077ed54a26d9e67d3384bc10 620 Pfam PF13247 4Fe-4S dicluster domain 500 553 4.3E-9 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB12994 0dafa602077ed54a26d9e67d3384bc10 620 Gene3D G3DSA:2.60.120.10 290 371 3.7E-4 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB12994 0dafa602077ed54a26d9e67d3384bc10 620 SUPERFAMILY SSF51206 289 374 2.09E-5 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like RB12994 0dafa602077ed54a26d9e67d3384bc10 620 Gene3D G3DSA:2.60.120.10 36 100 1.9E-16 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB12994 0dafa602077ed54a26d9e67d3384bc10 620 Gene3D G3DSA:2.60.120.10 170 231 1.9E-16 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB12994 0dafa602077ed54a26d9e67d3384bc10 620 Pfam PF00027 Cyclic nucleotide-binding domain 174 214 7.9E-8 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain RB379 3463ac55ed5fe31d14f2a7496331882c 613 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 124 530 1.7E-102 T 11-11-2016 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like RB379 3463ac55ed5fe31d14f2a7496331882c 613 SUPERFAMILY SSF55124 342 477 2.8E-24 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 Gene3D G3DSA:3.30.413.10 465 606 1.3E-30 T 11-11-2016 RB379 3463ac55ed5fe31d14f2a7496331882c 613 Gene3D G3DSA:3.30.413.10 203 367 1.5E-32 T 11-11-2016 RB379 3463ac55ed5fe31d14f2a7496331882c 613 Gene3D G3DSA:3.90.480.10 381 458 7.5E-36 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 Gene3D G3DSA:3.90.480.10 131 200 7.5E-36 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 SUPERFAMILY SSF56014 467 606 1.22E-31 T 11-11-2016 RB379 3463ac55ed5fe31d14f2a7496331882c 613 SUPERFAMILY SSF56014 203 369 1.2E-36 T 11-11-2016 RB379 3463ac55ed5fe31d14f2a7496331882c 613 PRINTS PR00397 Sirohaem Fe-binding site signature 510 528 9.6E-5 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 PRINTS PR00397 Sirohaem Fe-binding site signature 466 484 9.6E-5 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 133 187 2.3E-13 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 389 454 1.2E-20 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 510 526 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 SUPERFAMILY SSF55124 96 200 1.31E-18 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 498 588 2.3E-8 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB379 3463ac55ed5fe31d14f2a7496331882c 613 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 203 363 7.8E-29 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB3686 731a5f30aae4f79164e42c37c999eadb 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 3.2E-13 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB3686 731a5f30aae4f79164e42c37c999eadb 327 Gene3D G3DSA:3.40.50.720 150 240 8.0E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3686 731a5f30aae4f79164e42c37c999eadb 327 SMART SM00829 10 316 4.5E-38 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB3686 731a5f30aae4f79164e42c37c999eadb 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 11-11-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RB3686 731a5f30aae4f79164e42c37c999eadb 327 SUPERFAMILY SSF50129 1 148 8.22E-40 T 11-11-2016 IPR011032 GroES-like RB3686 731a5f30aae4f79164e42c37c999eadb 327 Pfam PF13602 Zinc-binding dehydrogenase 186 315 2.0E-25 T 11-11-2016 RB3686 731a5f30aae4f79164e42c37c999eadb 327 Gene3D G3DSA:3.90.180.10 1 149 4.2E-46 T 11-11-2016 IPR011032 GroES-like RB3686 731a5f30aae4f79164e42c37c999eadb 327 SUPERFAMILY SSF51735 116 285 5.01E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9037 6770df530d92eefae302e6afa5cf5f22 344 Gene3D G3DSA:1.25.40.10 156 334 2.5E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9037 6770df530d92eefae302e6afa5cf5f22 344 SUPERFAMILY SSF48452 156 340 2.09E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SUPERFAMILY SSF47384 735 772 5.49E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Gene3D G3DSA:3.30.565.10 847 1000 1.4E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SMART SM00086 426 468 7.0E-7 T 11-11-2016 IPR001610 PAC motif RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SMART SM00086 555 598 0.058 T 11-11-2016 IPR001610 PAC motif RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SMART SM00086 687 727 9.8 T 11-11-2016 IPR001610 PAC motif RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SUPERFAMILY SSF55785 363 467 1.13E-24 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 609 734 2.3E-8 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 358 475 2.8E-17 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SUPERFAMILY SSF55874 848 1001 3.01E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SMART SM00387 886 1003 7.1E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SMART SM00091 353 424 9.9E-5 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SMART SM00091 610 676 0.026 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SMART SM00091 480 548 4.0 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Gene3D G3DSA:3.30.450.20 606 725 3.7E-17 T 11-11-2016 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Gene3D G3DSA:1.10.287.130 812 840 2.4E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Gene3D G3DSA:1.10.287.130 737 768 2.4E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 890 1001 4.2E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SMART SM01079 69 270 2.8E-26 T 11-11-2016 IPR006189 CHASE domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Pfam PF08447 PAS fold 503 591 2.7E-14 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Gene3D G3DSA:3.30.450.20 364 458 1.1E-25 T 11-11-2016 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SUPERFAMILY SSF55785 595 725 6.46E-16 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Pfam PF03924 CHASE domain 72 255 2.2E-21 T 11-11-2016 IPR006189 CHASE domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Pfam PF13426 PAS domain 621 725 5.0E-8 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Pfam PF13426 PAS domain 364 467 8.7E-15 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 Gene3D G3DSA:3.30.450.20 459 605 6.7E-30 T 11-11-2016 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 SUPERFAMILY SSF55785 490 600 1.52E-14 T 11-11-2016 IPR000014 PAS domain RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 PRINTS PR00344 Bacterial sensor protein C-terminal signature 931 945 2.0E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1000 2.0E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 PRINTS PR00344 Bacterial sensor protein C-terminal signature 949 959 2.0E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3779 6e82eff7456e1225d1cf4a1d9a0ab9ad 1030 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 980 2.0E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12634 75d9c1e576d44876fc8f9d93aeea6f94 156 Gene3D G3DSA:1.20.120.400 25 149 3.7E-25 T 11-11-2016 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 RB12634 75d9c1e576d44876fc8f9d93aeea6f94 156 Pfam PF09055 Nickel-containing superoxide dismutase 22 149 6.1E-34 T 11-11-2016 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 RB9428 e41a16c6c8f7d922b5658739189af8b5 565 Gene3D G3DSA:1.10.287.130 311 389 1.8E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9428 e41a16c6c8f7d922b5658739189af8b5 565 SMART SM00387 437 547 1.0E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9428 e41a16c6c8f7d922b5658739189af8b5 565 Gene3D G3DSA:3.30.565.10 402 547 7.4E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9428 e41a16c6c8f7d922b5658739189af8b5 565 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 8.5E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB9428 e41a16c6c8f7d922b5658739189af8b5 565 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 526 8.5E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB9428 e41a16c6c8f7d922b5658739189af8b5 565 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 8.5E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB9428 e41a16c6c8f7d922b5658739189af8b5 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 544 8.1E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9428 e41a16c6c8f7d922b5658739189af8b5 565 SUPERFAMILY SSF55874 391 543 2.23E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9428 e41a16c6c8f7d922b5658739189af8b5 565 SUPERFAMILY SSF47384 306 390 5.1E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9428 e41a16c6c8f7d922b5658739189af8b5 565 Pfam PF00512 His Kinase A (phospho-acceptor) domain 322 391 1.8E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9428 e41a16c6c8f7d922b5658739189af8b5 565 SMART SM00388 319 395 9.3E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB6554 9741b3865fcff933c0a93e488901bd7e 399 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 2 385 38.954 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 RB6554 9741b3865fcff933c0a93e488901bd7e 399 Pfam PF03054 tRNA methyl transferase 3 384 2.2E-105 T 11-11-2016 RB6554 9741b3865fcff933c0a93e488901bd7e 399 Gene3D G3DSA:2.30.30.280 244 301 2.4E-14 T 11-11-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 RB6554 9741b3865fcff933c0a93e488901bd7e 399 SUPERFAMILY SSF52402 75 273 6.46E-44 T 11-11-2016 RB6554 9741b3865fcff933c0a93e488901bd7e 399 SUPERFAMILY SSF52402 2 41 6.46E-44 T 11-11-2016 RB6554 9741b3865fcff933c0a93e488901bd7e 399 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 384 3.5E-96 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 RB6554 9741b3865fcff933c0a93e488901bd7e 399 Gene3D G3DSA:3.40.50.620 71 236 1.8E-76 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB6554 9741b3865fcff933c0a93e488901bd7e 399 Gene3D G3DSA:3.40.50.620 2 39 1.8E-76 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB6554 9741b3865fcff933c0a93e488901bd7e 399 Gene3D G3DSA:2.40.30.10 305 389 3.5E-21 T 11-11-2016 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 77 2.5E-18 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 16 175 31.105 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 25 80 0.001 T 11-11-2016 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 SUPERFAMILY SSF52374 17 171 1.69E-37 T 11-11-2016 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 Pfam PF01467 Cytidylyltransferase-like 19 147 4.5E-18 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 99 115 9.2E-40 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 126 148 9.2E-40 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 63 87 9.2E-40 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 16 34 9.2E-40 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 34 55 9.2E-40 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 Gene3D G3DSA:3.40.50.620 13 173 1.5E-45 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB10654 0aabdfbcf482fe6c57287e13b7eb22e8 179 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 17 173 3.1E-54 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 RB11073 2b20b9b01040d1ca11ddd26b280d9a66 467 Gene3D G3DSA:2.40.50.100 72 104 5.6E-21 T 11-11-2016 RB11073 2b20b9b01040d1ca11ddd26b280d9a66 467 Gene3D G3DSA:2.40.50.100 221 250 5.6E-21 T 11-11-2016 RB11073 2b20b9b01040d1ca11ddd26b280d9a66 467 SUPERFAMILY SSF111369 134 192 2.09E-7 T 11-11-2016 RB11073 2b20b9b01040d1ca11ddd26b280d9a66 467 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 172 344 1.9E-8 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB11073 2b20b9b01040d1ca11ddd26b280d9a66 467 SUPERFAMILY SSF111369 194 349 3.92E-40 T 11-11-2016 RB11073 2b20b9b01040d1ca11ddd26b280d9a66 467 Pfam PF13533 Biotin-lipoyl like 72 119 1.2E-8 T 11-11-2016 RB11073 2b20b9b01040d1ca11ddd26b280d9a66 467 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 189 423 3.2E-47 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB11073 2b20b9b01040d1ca11ddd26b280d9a66 467 SUPERFAMILY SSF111369 61 135 1.96E-19 T 11-11-2016 RB9114 28b815b381f553d98b9a62e677afa085 524 SUPERFAMILY SSF53300 359 519 1.63E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9114 28b815b381f553d98b9a62e677afa085 524 Gene3D G3DSA:3.40.50.410 359 475 4.0E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9076 eae2feeb6b504883a2f92aee0671abd1 635 SMART SM00382 67 220 6.5E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9076 eae2feeb6b504883a2f92aee0671abd1 635 SMART SM00382 345 513 1.4E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9076 eae2feeb6b504883a2f92aee0671abd1 635 Pfam PF16326 ABC transporter C-terminal domain 568 630 1.5E-10 T 11-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RB9076 eae2feeb6b504883a2f92aee0671abd1 635 SUPERFAMILY SSF52540 35 238 1.19E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9076 eae2feeb6b504883a2f92aee0671abd1 635 Pfam PF12848 ABC transporter 225 300 1.1E-17 T 11-11-2016 IPR032781 ABC-transporter extension domain RB9076 eae2feeb6b504883a2f92aee0671abd1 635 SUPERFAMILY SSF52540 305 524 1.72E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9076 eae2feeb6b504883a2f92aee0671abd1 635 Pfam PF00005 ABC transporter 337 467 1.6E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9076 eae2feeb6b504883a2f92aee0671abd1 635 Pfam PF00005 ABC transporter 58 186 4.4E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9076 eae2feeb6b504883a2f92aee0671abd1 635 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB9076 eae2feeb6b504883a2f92aee0671abd1 635 Gene3D G3DSA:3.40.50.300 41 273 1.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9076 eae2feeb6b504883a2f92aee0671abd1 635 Gene3D G3DSA:3.40.50.300 319 530 1.9E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9076 eae2feeb6b504883a2f92aee0671abd1 635 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7010 cb7957540da96f64db653d0ec8951ece 474 Gene3D G3DSA:4.10.860.10 227 285 9.2E-17 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB7010 cb7957540da96f64db653d0ec8951ece 474 SUPERFAMILY SSF82771 55 139 1.7E-17 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily RB7010 cb7957540da96f64db653d0ec8951ece 474 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 311 459 6.3E-41 T 11-11-2016 IPR001162 UvrC family homology region RB7010 cb7957540da96f64db653d0ec8951ece 474 Pfam PF02151 UvrB/uvrC motif 249 282 3.8E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB7010 cb7957540da96f64db653d0ec8951ece 474 Gene3D G3DSA:3.40.1440.10 56 132 1.7E-5 T 11-11-2016 IPR027299 GIY-YIG domain RB7010 cb7957540da96f64db653d0ec8951ece 474 Pfam PF01541 GIY-YIG catalytic domain 57 131 1.1E-7 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily RB7010 cb7957540da96f64db653d0ec8951ece 474 SUPERFAMILY SSF46600 235 284 2.75E-11 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB7010 cb7957540da96f64db653d0ec8951ece 474 SMART SM00465 55 137 3.6E-11 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily RB1837 b19836b69907edb7b91fab91919cf054 419 Pfam PF00175 Oxidoreductase NAD-binding domain 290 397 1.6E-15 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RB1837 b19836b69907edb7b91fab91919cf054 419 Pfam PF00970 Oxidoreductase FAD-binding domain 215 278 6.8E-10 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RB1837 b19836b69907edb7b91fab91919cf054 419 PIRSF PIRSF000044 10 419 3.7E-228 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 RB1837 b19836b69907edb7b91fab91919cf054 419 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 14 419 62.33 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 RB1837 b19836b69907edb7b91fab91919cf054 419 Gene3D G3DSA:2.40.30.10 139 276 5.0E-58 T 11-11-2016 RB1837 b19836b69907edb7b91fab91919cf054 419 SUPERFAMILY SSF52343 271 415 1.23E-35 T 11-11-2016 RB1837 b19836b69907edb7b91fab91919cf054 419 SUPERFAMILY SSF54292 49 136 2.79E-22 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RB1837 b19836b69907edb7b91fab91919cf054 419 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 16 419 1.1E-201 T 11-11-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 RB1837 b19836b69907edb7b91fab91919cf054 419 Gene3D G3DSA:3.40.50.80 288 404 2.4E-38 T 11-11-2016 RB1837 b19836b69907edb7b91fab91919cf054 419 Gene3D G3DSA:3.10.20.30 54 138 4.0E-21 T 11-11-2016 IPR012675 Beta-grasp domain RB1837 b19836b69907edb7b91fab91919cf054 419 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 49 126 2.8E-12 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RB1837 b19836b69907edb7b91fab91919cf054 419 SUPERFAMILY SSF63380 116 284 4.43E-36 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB2693 8d55fd5a855315fecc00036be32f278e 989 Pfam PF07583 Protein of unknown function (DUF1549) 184 391 8.3E-78 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB2693 8d55fd5a855315fecc00036be32f278e 989 Pfam PF07587 Protein of unknown function (DUF1553) 703 957 4.4E-88 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB2693 8d55fd5a855315fecc00036be32f278e 989 SUPERFAMILY SSF46626 63 156 1.72E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2693 8d55fd5a855315fecc00036be32f278e 989 Pfam PF07635 Planctomycete cytochrome C 77 133 4.7E-15 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB11669 279e13255abd7c410f14afcded25f065 481 Gene3D G3DSA:1.10.10.60 409 478 6.1E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11669 279e13255abd7c410f14afcded25f065 481 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 175 188 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB11669 279e13255abd7c410f14afcded25f065 481 Pfam PF00158 Sigma-54 interaction domain 151 318 1.7E-69 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB11669 279e13255abd7c410f14afcded25f065 481 SUPERFAMILY SSF46689 400 478 2.29E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11669 279e13255abd7c410f14afcded25f065 481 Gene3D G3DSA:1.10.8.60 324 400 1.8E-19 T 11-11-2016 RB11669 279e13255abd7c410f14afcded25f065 481 Gene3D G3DSA:3.40.50.2300 6 129 1.4E-33 T 11-11-2016 RB11669 279e13255abd7c410f14afcded25f065 481 Pfam PF00072 Response regulator receiver domain 8 113 7.3E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11669 279e13255abd7c410f14afcded25f065 481 SUPERFAMILY SSF52172 6 196 1.18E-40 T 11-11-2016 IPR011006 CheY-like superfamily RB11669 279e13255abd7c410f14afcded25f065 481 Pfam PF02954 Bacterial regulatory protein, Fis family 438 474 2.1E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11669 279e13255abd7c410f14afcded25f065 481 SMART SM00448 5 116 2.0E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11669 279e13255abd7c410f14afcded25f065 481 Gene3D G3DSA:3.40.50.300 150 323 4.6E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11669 279e13255abd7c410f14afcded25f065 481 SMART SM00382 171 314 5.8E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11669 279e13255abd7c410f14afcded25f065 481 SUPERFAMILY SSF52540 152 392 4.84E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9132 66f04b17009fd985b245516bf02093e0 425 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 182 294 4.4E-7 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RB9132 66f04b17009fd985b245516bf02093e0 425 Gene3D G3DSA:3.30.360.10 364 412 8.2E-37 T 11-11-2016 RB9132 66f04b17009fd985b245516bf02093e0 425 Gene3D G3DSA:3.30.360.10 190 312 8.2E-37 T 11-11-2016 RB9132 66f04b17009fd985b245516bf02093e0 425 Gene3D G3DSA:3.40.50.720 35 189 1.9E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9132 66f04b17009fd985b245516bf02093e0 425 SUPERFAMILY SSF55347 176 349 2.62E-40 T 11-11-2016 RB9132 66f04b17009fd985b245516bf02093e0 425 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 169 2.0E-22 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB9132 66f04b17009fd985b245516bf02093e0 425 SUPERFAMILY SSF51735 21 202 2.63E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3735 fd4f024cc33dd20677b059efd973b66c 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 278 4.6E-97 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RB3735 fd4f024cc33dd20677b059efd973b66c 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 1.1E-99 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RB3735 fd4f024cc33dd20677b059efd973b66c 283 Gene3D G3DSA:3.40.50.620 2 176 6.5E-72 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB3735 fd4f024cc33dd20677b059efd973b66c 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 37.668 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RB3735 fd4f024cc33dd20677b059efd973b66c 283 Gene3D G3DSA:3.30.1300.10 178 280 3.3E-29 T 11-11-2016 RB3735 fd4f024cc33dd20677b059efd973b66c 283 SUPERFAMILY SSF52374 3 280 3.26E-99 T 11-11-2016 RB8440 149213f4f79108942d6a86e9802109e1 465 Pfam PF07394 Protein of unknown function (DUF1501) 50 463 3.7E-158 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB8440 149213f4f79108942d6a86e9802109e1 465 Gene3D G3DSA:3.40.720.10 343 449 1.3E-5 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8440 149213f4f79108942d6a86e9802109e1 465 SUPERFAMILY SSF53649 300 449 3.6E-20 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6497 c36f7367baa7b544577ce6c8e42e0a05 231 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 115 222 9.0E-24 T 11-11-2016 IPR018673 Protein of unknown function DUF2141 RB7375 e84070f7adbd6eca2caea472416af40f 412 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RB7375 e84070f7adbd6eca2caea472416af40f 412 Pfam PF07687 Peptidase dimerisation domain 211 309 1.1E-7 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB7375 e84070f7adbd6eca2caea472416af40f 412 SUPERFAMILY SSF53187 5 212 2.04E-66 T 11-11-2016 RB7375 e84070f7adbd6eca2caea472416af40f 412 SUPERFAMILY SSF53187 325 408 2.04E-66 T 11-11-2016 RB7375 e84070f7adbd6eca2caea472416af40f 412 Gene3D G3DSA:3.30.70.360 212 322 1.3E-29 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB7375 e84070f7adbd6eca2caea472416af40f 412 PIRSF PIRSF037215 2 411 7.9E-161 T 11-11-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 RB7375 e84070f7adbd6eca2caea472416af40f 412 SUPERFAMILY SSF55031 211 322 3.14E-27 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB7375 e84070f7adbd6eca2caea472416af40f 412 Pfam PF01546 Peptidase family M20/M25/M40 142 405 1.7E-11 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RB7375 e84070f7adbd6eca2caea472416af40f 412 Gene3D G3DSA:3.40.630.10 1 211 2.6E-97 T 11-11-2016 RB7375 e84070f7adbd6eca2caea472416af40f 412 Gene3D G3DSA:3.40.630.10 325 410 2.6E-97 T 11-11-2016 RB7375 e84070f7adbd6eca2caea472416af40f 412 TIGRFAM TIGR01882 peptidase-T: peptidase T 5 410 1.4E-115 T 11-11-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 RB9499 04549d0f0de934c3aa3f66bc24957204 375 Gene3D G3DSA:3.40.50.300 74 239 1.6E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9499 04549d0f0de934c3aa3f66bc24957204 375 PIRSF PIRSF002849 38 375 5.7E-132 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB9499 04549d0f0de934c3aa3f66bc24957204 375 SUPERFAMILY SSF52540 61 349 2.52E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9499 04549d0f0de934c3aa3f66bc24957204 375 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 93 223 9.4E-66 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB9499 04549d0f0de934c3aa3f66bc24957204 375 Gene3D G3DSA:1.10.8.300 257 372 5.2E-37 T 11-11-2016 RB997 823315727849d515d0304edf91eae688 508 SUPERFAMILY SSF52113 71 154 4.58E-6 T 11-11-2016 IPR001357 BRCT domain RB997 823315727849d515d0304edf91eae688 508 Gene3D G3DSA:1.10.1660.10 174 237 1.1E-6 T 11-11-2016 RB997 823315727849d515d0304edf91eae688 508 SMART SM00422 169 237 0.0067 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RB997 823315727849d515d0304edf91eae688 508 SMART SM00028 454 487 1.2 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB997 823315727849d515d0304edf91eae688 508 SMART SM00028 352 385 260.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB997 823315727849d515d0304edf91eae688 508 SMART SM00028 386 419 0.22 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB997 823315727849d515d0304edf91eae688 508 SMART SM00028 420 453 21.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB997 823315727849d515d0304edf91eae688 508 Pfam PF00376 MerR family regulatory protein 171 199 4.5E-8 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RB997 823315727849d515d0304edf91eae688 508 Gene3D G3DSA:3.40.50.10190 73 156 1.5E-6 T 11-11-2016 IPR001357 BRCT domain RB997 823315727849d515d0304edf91eae688 508 SUPERFAMILY SSF48452 349 490 3.23E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB997 823315727849d515d0304edf91eae688 508 Pfam PF13432 Tetratricopeptide repeat 362 418 0.0013 T 11-11-2016 RB997 823315727849d515d0304edf91eae688 508 Pfam PF13432 Tetratricopeptide repeat 426 488 7.7E-5 T 11-11-2016 RB997 823315727849d515d0304edf91eae688 508 SUPERFAMILY SSF46955 168 230 2.29E-8 T 11-11-2016 IPR009061 Putative DNA-binding domain RB997 823315727849d515d0304edf91eae688 508 Gene3D G3DSA:1.25.40.10 349 491 8.1E-29 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1212 080776bd03ed7c77650adfea67348827 449 SUPERFAMILY SSF54631 131 273 8.84E-29 T 11-11-2016 RB1212 080776bd03ed7c77650adfea67348827 449 Pfam PF00571 CBS domain 132 192 1.8E-7 T 11-11-2016 IPR000644 CBS domain RB1212 080776bd03ed7c77650adfea67348827 449 Pfam PF00571 CBS domain 199 252 2.4E-6 T 11-11-2016 IPR000644 CBS domain RB1212 080776bd03ed7c77650adfea67348827 449 Gene3D G3DSA:1.10.357.20 279 448 5.0E-47 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RB1212 080776bd03ed7c77650adfea67348827 449 SUPERFAMILY SSF161093 278 448 9.15E-41 T 11-11-2016 RB1212 080776bd03ed7c77650adfea67348827 449 SMART SM00116 139 192 0.87 T 11-11-2016 IPR000644 CBS domain RB1212 080776bd03ed7c77650adfea67348827 449 SMART SM00116 205 253 1.9E-4 T 11-11-2016 IPR000644 CBS domain RB1212 080776bd03ed7c77650adfea67348827 449 Gene3D G3DSA:1.25.60.10 6 124 5.4E-22 T 11-11-2016 RB1212 080776bd03ed7c77650adfea67348827 449 Gene3D G3DSA:3.10.580.10 125 261 5.1E-21 T 11-11-2016 RB1212 080776bd03ed7c77650adfea67348827 449 Pfam PF03448 MgtE intracellular N domain 30 129 3.7E-20 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain RB1212 080776bd03ed7c77650adfea67348827 449 Pfam PF01769 Divalent cation transporter 320 441 4.8E-25 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RB1212 080776bd03ed7c77650adfea67348827 449 SMART SM00924 29 132 8.1E-25 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain RB1212 080776bd03ed7c77650adfea67348827 449 TIGRFAM TIGR00400 mgtE: magnesium transporter 12 448 3.3E-102 T 11-11-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 RB1212 080776bd03ed7c77650adfea67348827 449 SUPERFAMILY SSF158791 5 127 3.01E-23 T 11-11-2016 RB9372 674f152edca7876a22ad05aee2d3b159 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 198 1.7E-66 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RB9372 674f152edca7876a22ad05aee2d3b159 205 Gene3D G3DSA:3.40.50.880 1 199 7.8E-78 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9372 674f152edca7876a22ad05aee2d3b159 205 Pfam PF00117 Glutamine amidotransferase class-I 4 189 4.5E-19 T 11-11-2016 IPR017926 Glutamine amidotransferase RB9372 674f152edca7876a22ad05aee2d3b159 205 SUPERFAMILY SSF52317 2 199 3.47E-56 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9372 674f152edca7876a22ad05aee2d3b159 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 200 35.432 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RB9372 674f152edca7876a22ad05aee2d3b159 205 PIRSF PIRSF000495 1 202 3.0E-71 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 SMART SM00564 750 781 170.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 SMART SM00564 521 552 0.064 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 SMART SM00564 654 686 800.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 SUPERFAMILY SSF50969 831 1122 1.65E-9 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 Pfam PF13360 PQQ-like domain 452 621 3.0E-13 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 SUPERFAMILY SSF50998 460 910 3.92E-28 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 Gene3D G3DSA:2.140.10.10 869 1125 7.1E-17 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 Gene3D G3DSA:2.140.10.10 645 805 7.1E-17 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB10706 59b7b15ad9e485e249ba47a2b5fa9719 1129 Gene3D G3DSA:2.140.10.10 444 620 2.0E-15 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB6466 5c0240de7d044c302461e7571c0140e5 640 Gene3D G3DSA:3.30.70.240 438 517 3.2E-27 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB6466 5c0240de7d044c302461e7571c0140e5 640 Gene3D G3DSA:3.40.50.300 36 239 2.7E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6466 5c0240de7d044c302461e7571c0140e5 640 SMART SM00838 436 520 1.5E-4 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB6466 5c0240de7d044c302461e7571c0140e5 640 Pfam PF03144 Elongation factor Tu domain 2 253 327 4.7E-8 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RB6466 5c0240de7d044c302461e7571c0140e5 640 SUPERFAMILY SSF50447 215 338 1.17E-25 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB6466 5c0240de7d044c302461e7571c0140e5 640 Gene3D G3DSA:2.40.50.250 519 613 2.1E-39 T 11-11-2016 RB6466 5c0240de7d044c302461e7571c0140e5 640 PRINTS PR00315 GTP-binding elongation factor signature 85 93 1.5E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB6466 5c0240de7d044c302461e7571c0140e5 640 PRINTS PR00315 GTP-binding elongation factor signature 105 115 1.5E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB6466 5c0240de7d044c302461e7571c0140e5 640 PRINTS PR00315 GTP-binding elongation factor signature 121 132 1.5E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB6466 5c0240de7d044c302461e7571c0140e5 640 PRINTS PR00315 GTP-binding elongation factor signature 41 54 1.5E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB6466 5c0240de7d044c302461e7571c0140e5 640 PRINTS PR00315 GTP-binding elongation factor signature 157 166 1.5E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB6466 5c0240de7d044c302461e7571c0140e5 640 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 39 177 3.0E-22 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB6466 5c0240de7d044c302461e7571c0140e5 640 SUPERFAMILY SSF54980 436 548 1.62E-25 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB6466 5c0240de7d044c302461e7571c0140e5 640 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 39 635 4.5E-256 T 11-11-2016 IPR006298 GTP-binding protein TypA GO:0005525 RB6466 5c0240de7d044c302461e7571c0140e5 640 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 78 93 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site RB6466 5c0240de7d044c302461e7571c0140e5 640 Pfam PF00679 Elongation factor G C-terminus 435 518 9.1E-21 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB6466 5c0240de7d044c302461e7571c0140e5 640 Gene3D G3DSA:2.40.30.10 240 341 2.7E-22 T 11-11-2016 RB6466 5c0240de7d044c302461e7571c0140e5 640 Pfam PF00009 Elongation factor Tu GTP binding domain 38 229 7.6E-54 T 11-11-2016 RB6466 5c0240de7d044c302461e7571c0140e5 640 SUPERFAMILY SSF52540 36 241 4.03E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6466 5c0240de7d044c302461e7571c0140e5 640 SUPERFAMILY SSF54980 340 425 1.19E-11 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB6466 5c0240de7d044c302461e7571c0140e5 640 Gene3D G3DSA:3.30.70.870 342 437 1.0E-34 T 11-11-2016 RB10025 5fd7cfc89df1ea9ce5ee2128ee21145c 309 SUPERFAMILY SSF54001 135 299 2.52E-38 T 11-11-2016 RB10025 5fd7cfc89df1ea9ce5ee2128ee21145c 309 Pfam PF01841 Transglutaminase-like superfamily 141 253 6.8E-23 T 11-11-2016 IPR002931 Transglutaminase-like RB10025 5fd7cfc89df1ea9ce5ee2128ee21145c 309 SMART SM00460 184 255 2.2E-19 T 11-11-2016 IPR002931 Transglutaminase-like RB10025 5fd7cfc89df1ea9ce5ee2128ee21145c 309 Gene3D G3DSA:3.90.260.10 165 257 5.4E-13 T 11-11-2016 IPR002931 Transglutaminase-like RB10025 5fd7cfc89df1ea9ce5ee2128ee21145c 309 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 10 90 6.3E-20 T 11-11-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RB12012 d5f200dd8d88f5fedd76259950f9f506 509 TIGRFAM TIGR01312 XylB: xylulokinase 5 492 7.9E-175 T 11-11-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 RB12012 d5f200dd8d88f5fedd76259950f9f506 509 Gene3D G3DSA:3.30.420.40 2 249 1.6E-76 T 11-11-2016 RB12012 d5f200dd8d88f5fedd76259950f9f506 509 SUPERFAMILY SSF53067 3 250 6.34E-77 T 11-11-2016 RB12012 d5f200dd8d88f5fedd76259950f9f506 509 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 248 2.0E-74 T 11-11-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RB12012 d5f200dd8d88f5fedd76259950f9f506 509 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 449 2.3E-40 T 11-11-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RB12012 d5f200dd8d88f5fedd76259950f9f506 509 Gene3D G3DSA:3.30.420.40 251 497 2.0E-58 T 11-11-2016 RB12012 d5f200dd8d88f5fedd76259950f9f506 509 PIRSF PIRSF000538 1 504 7.5E-166 T 11-11-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RB12012 d5f200dd8d88f5fedd76259950f9f506 509 SUPERFAMILY SSF53067 250 497 3.67E-67 T 11-11-2016 RB5856 bcef66f0e74770d9abea978491e3a403 386 TIGRFAM TIGR03366 HpnZ_proposed: putative phosphonate catabolism associated alcohol dehydrogenase 45 363 2.8E-146 T 11-11-2016 IPR017743 Alcohol dehydrogenase, phosphonate catabolism-associated, putative RB5856 bcef66f0e74770d9abea978491e3a403 386 Pfam PF00107 Zinc-binding dehydrogenase 212 341 8.4E-20 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB5856 bcef66f0e74770d9abea978491e3a403 386 SUPERFAMILY SSF51735 171 343 2.13E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5856 bcef66f0e74770d9abea978491e3a403 386 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 49 158 1.2E-16 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB5856 bcef66f0e74770d9abea978491e3a403 386 SUPERFAMILY SSF50129 42 192 4.72E-26 T 11-11-2016 IPR011032 GroES-like RB5856 bcef66f0e74770d9abea978491e3a403 386 Gene3D G3DSA:3.40.50.720 205 325 9.2E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5856 bcef66f0e74770d9abea978491e3a403 386 Gene3D G3DSA:3.90.180.10 42 204 1.6E-34 T 11-11-2016 IPR011032 GroES-like RB3630 f4de641c7871cd09695dd46e049f944b 313 Gene3D G3DSA:1.20.1290.10 263 302 7.1E-28 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB3630 f4de641c7871cd09695dd46e049f944b 313 Gene3D G3DSA:1.20.1290.10 124 213 7.1E-28 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB3630 f4de641c7871cd09695dd46e049f944b 313 Pfam PF02627 Carboxymuconolactone decarboxylase family 165 242 2.9E-8 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RB3630 f4de641c7871cd09695dd46e049f944b 313 SUPERFAMILY SSF69118 123 302 2.21E-45 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB1736 999fe9c56dad474281c0e1387328a965 622 Gene3D G3DSA:3.30.1120.10 375 464 1.2E-13 T 11-11-2016 RB1736 999fe9c56dad474281c0e1387328a965 622 Pfam PF00884 Sulfatase 38 359 5.8E-68 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB1736 999fe9c56dad474281c0e1387328a965 622 Gene3D G3DSA:3.40.720.10 37 374 8.7E-99 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1736 999fe9c56dad474281c0e1387328a965 622 SUPERFAMILY SSF53649 38 467 3.93E-117 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8260 e9436cd5297d5585e40d196b320a23fd 108 Gene3D G3DSA:3.30.1200.10 17 100 9.9E-27 T 11-11-2016 IPR003746 Protein of unknown function DUF167 RB8260 e9436cd5297d5585e40d196b320a23fd 108 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 18 89 4.0E-24 T 11-11-2016 IPR003746 Protein of unknown function DUF167 RB8260 e9436cd5297d5585e40d196b320a23fd 108 SUPERFAMILY SSF69786 14 93 9.29E-26 T 11-11-2016 IPR003746 Protein of unknown function DUF167 RB8260 e9436cd5297d5585e40d196b320a23fd 108 SMART SM01152 14 90 4.6E-33 T 11-11-2016 IPR003746 Protein of unknown function DUF167 RB8260 e9436cd5297d5585e40d196b320a23fd 108 Hamap MF_00634 UPF0235 protein YggU [yggU]. 14 102 18.99 T 11-11-2016 IPR003746 Protein of unknown function DUF167 RB10062 74d98a059f078225459cc793caad19e4 424 Gene3D G3DSA:3.30.9.10 93 140 2.3E-6 T 11-11-2016 RB10062 74d98a059f078225459cc793caad19e4 424 Gene3D G3DSA:3.50.50.60 142 223 9.9E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10062 74d98a059f078225459cc793caad19e4 424 Gene3D G3DSA:3.50.50.60 4 91 9.9E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10062 74d98a059f078225459cc793caad19e4 424 SUPERFAMILY SSF51905 9 230 3.3E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10062 74d98a059f078225459cc793caad19e4 424 SUPERFAMILY SSF51905 261 308 3.3E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10062 74d98a059f078225459cc793caad19e4 424 Pfam PF01266 FAD dependent oxidoreductase 10 415 2.3E-65 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RB548 d6fc472eedef315819ea4e8315d39562 633 Gene3D G3DSA:3.20.20.80 149 517 6.6E-80 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB548 d6fc472eedef315819ea4e8315d39562 633 SUPERFAMILY SSF81296 49 140 1.4E-23 T 11-11-2016 IPR014756 Immunoglobulin E-set RB548 d6fc472eedef315819ea4e8315d39562 633 Gene3D G3DSA:2.60.40.1180 535 632 1.7E-18 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta RB548 d6fc472eedef315819ea4e8315d39562 633 PIRSF PIRSF000463 8 633 1.9E-102 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RB548 d6fc472eedef315819ea4e8315d39562 633 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 537 632 5.4E-13 T 11-11-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RB548 d6fc472eedef315819ea4e8315d39562 633 SMART SM00642 161 517 4.6E-9 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB548 d6fc472eedef315819ea4e8315d39562 633 SUPERFAMILY SSF51011 531 632 3.89E-17 T 11-11-2016 RB548 d6fc472eedef315819ea4e8315d39562 633 Gene3D G3DSA:2.60.40.10 47 139 4.3E-27 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB548 d6fc472eedef315819ea4e8315d39562 633 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 49 125 2.3E-19 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RB548 d6fc472eedef315819ea4e8315d39562 633 Pfam PF00128 Alpha amylase, catalytic domain 183 280 4.1E-13 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB548 d6fc472eedef315819ea4e8315d39562 633 Pfam PF00128 Alpha amylase, catalytic domain 293 483 1.9E-8 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB548 d6fc472eedef315819ea4e8315d39562 633 SUPERFAMILY SSF51445 136 526 8.94E-94 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB9886 c19c0e74ef8108024347716ed815b917 523 SUPERFAMILY SSF53649 340 507 3.4E-22 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9886 c19c0e74ef8108024347716ed815b917 523 Gene3D G3DSA:3.40.720.10 388 508 1.2E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9886 c19c0e74ef8108024347716ed815b917 523 Pfam PF07394 Protein of unknown function (DUF1501) 100 522 1.2E-162 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB9886 c19c0e74ef8108024347716ed815b917 523 Pfam PF07640 QPP 1 34 6.1E-18 T 11-11-2016 IPR011507 QPP RB11352 8566cbf38c930cdf97e9663d36f1cf53 285 Pfam PF04055 Radical SAM superfamily 30 153 1.6E-7 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB11352 8566cbf38c930cdf97e9663d36f1cf53 285 SUPERFAMILY SSF102114 22 155 1.02E-15 T 11-11-2016 RB11352 8566cbf38c930cdf97e9663d36f1cf53 285 Gene3D G3DSA:3.20.20.70 17 154 5.2E-15 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB11352 8566cbf38c930cdf97e9663d36f1cf53 285 Pfam PF13353 4Fe-4S single cluster domain 28 114 1.1E-5 T 11-11-2016 RB11916 baa4c535f1500db01df552c575c6ec59 752 Gene3D G3DSA:3.90.260.10 473 591 5.7E-25 T 11-11-2016 IPR002931 Transglutaminase-like RB11916 baa4c535f1500db01df552c575c6ec59 752 SUPERFAMILY SSF54001 402 611 3.08E-35 T 11-11-2016 RB11916 baa4c535f1500db01df552c575c6ec59 752 Pfam PF01841 Transglutaminase-like superfamily 470 586 9.7E-21 T 11-11-2016 IPR002931 Transglutaminase-like RB11916 baa4c535f1500db01df552c575c6ec59 752 SMART SM00460 517 589 2.7E-10 T 11-11-2016 IPR002931 Transglutaminase-like RB1240 631d1e0a0db735318f48d3c0c1b41fde 504 SUPERFAMILY SSF52799 370 481 9.42E-11 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like RB1240 631d1e0a0db735318f48d3c0c1b41fde 504 Pfam PF06439 Domain of Unknown Function (DUF1080) 116 314 4.2E-32 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB1240 631d1e0a0db735318f48d3c0c1b41fde 504 Gene3D G3DSA:3.90.190.10 364 486 5.1E-24 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like RB10040 d82393bf6573181c75b350b78a23ab7a 407 SUPERFAMILY SSF48695 64 131 9.89E-31 T 11-11-2016 IPR011031 Multihaem cytochrome RB10040 d82393bf6573181c75b350b78a23ab7a 407 SUPERFAMILY SSF48695 215 404 9.89E-31 T 11-11-2016 IPR011031 Multihaem cytochrome RB10040 d82393bf6573181c75b350b78a23ab7a 407 Gene3D G3DSA:1.10.710.10 64 94 3.9E-22 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB10040 d82393bf6573181c75b350b78a23ab7a 407 Gene3D G3DSA:1.10.710.10 216 386 3.9E-22 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB10040 d82393bf6573181c75b350b78a23ab7a 407 Gene3D G3DSA:1.10.710.10 179 180 3.9E-22 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB10040 d82393bf6573181c75b350b78a23ab7a 407 Pfam PF13435 Cytochrome c554 and c-prime 222 257 0.0034 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB10006 5f6c6d39439285d1ff2aef0985b57e3a 223 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 9 223 1.3E-80 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RB10006 5f6c6d39439285d1ff2aef0985b57e3a 223 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 15 223 37.727 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RB10006 5f6c6d39439285d1ff2aef0985b57e3a 223 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 190 203 - T 11-11-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RB10006 5f6c6d39439285d1ff2aef0985b57e3a 223 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 50 125 3.8E-19 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RB10006 5f6c6d39439285d1ff2aef0985b57e3a 223 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 180 223 2.4E-20 T 11-11-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RB10006 5f6c6d39439285d1ff2aef0985b57e3a 223 PIRSF PIRSF000190 1 223 2.7E-86 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RB10006 5f6c6d39439285d1ff2aef0985b57e3a 223 SUPERFAMILY SSF50475 21 223 2.81E-64 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB10006 5f6c6d39439285d1ff2aef0985b57e3a 223 Gene3D G3DSA:2.30.110.10 21 223 1.8E-79 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB6344 201cecdc1237570f94ce9f0b73e83968 736 Gene3D G3DSA:3.90.580.10 41 130 1.3E-31 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RB6344 201cecdc1237570f94ce9f0b73e83968 736 Pfam PF08275 DNA primase catalytic core, N-terminal domain 170 301 4.6E-37 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal RB6344 201cecdc1237570f94ce9f0b73e83968 736 TIGRFAM TIGR01391 dnaG: DNA primase 40 456 4.7E-103 T 11-11-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RB6344 201cecdc1237570f94ce9f0b73e83968 736 Gene3D G3DSA:3.90.980.10 148 289 8.7E-31 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal RB6344 201cecdc1237570f94ce9f0b73e83968 736 Pfam PF13662 Toprim domain 309 377 3.6E-15 T 11-11-2016 IPR006171 Toprim domain RB6344 201cecdc1237570f94ce9f0b73e83968 736 SMART SM00400 67 121 2.2E-17 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RB6344 201cecdc1237570f94ce9f0b73e83968 736 SMART SM00493 309 380 2.5E-9 T 11-11-2016 IPR006171 Toprim domain RB6344 201cecdc1237570f94ce9f0b73e83968 736 Gene3D G3DSA:3.40.1360.10 291 408 1.0E-35 T 11-11-2016 RB6344 201cecdc1237570f94ce9f0b73e83968 736 Pfam PF01807 CHC2 zinc finger 42 129 3.9E-26 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RB6344 201cecdc1237570f94ce9f0b73e83968 736 Hamap MF_00974 DNA primase [dnaG]. 31 726 23.237 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RB6344 201cecdc1237570f94ce9f0b73e83968 736 SUPERFAMILY SSF56731 148 449 3.01E-77 T 11-11-2016 RB6344 201cecdc1237570f94ce9f0b73e83968 736 SUPERFAMILY SSF57783 39 130 1.45E-29 T 11-11-2016 RB3886 6a64fa2ed0ff87af541b5cb24cb0e1b5 200 Pfam PF01765 Ribosome recycling factor 35 198 9.5E-55 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RB3886 6a64fa2ed0ff87af541b5cb24cb0e1b5 200 Hamap MF_00040 Ribosome-recycling factor [frr]. 18 200 25.38 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 RB3886 6a64fa2ed0ff87af541b5cb24cb0e1b5 200 TIGRFAM TIGR00496 frr: ribosome recycling factor 25 199 4.7E-59 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 RB3886 6a64fa2ed0ff87af541b5cb24cb0e1b5 200 Gene3D G3DSA:1.10.132.20 81 199 7.6E-33 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RB3886 6a64fa2ed0ff87af541b5cb24cb0e1b5 200 SUPERFAMILY SSF55194 18 199 2.09E-62 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RB6209 40ca1e2b98f13b04f93094d4c831bd64 398 TIGRFAM TIGR03123 one_C_unchar_1: probable H4MPT-linked C1 transfer pathway protein 49 389 5.6E-79 T 11-11-2016 IPR002756 4-[[4-(2-aminoethyl)phenoxy]-methyl]-2-furanmethanamine-glutamate synthase RB6209 40ca1e2b98f13b04f93094d4c831bd64 398 Pfam PF01968 Hydantoinase/oxoprolinase 112 389 1.6E-14 T 11-11-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 RB6209 40ca1e2b98f13b04f93094d4c831bd64 398 Gene3D G3DSA:3.30.420.190 179 393 6.0E-68 T 11-11-2016 RB6209 40ca1e2b98f13b04f93094d4c831bd64 398 SUPERFAMILY SSF53067 172 216 1.27E-9 T 11-11-2016 RB6209 40ca1e2b98f13b04f93094d4c831bd64 398 SUPERFAMILY SSF53067 47 127 1.27E-9 T 11-11-2016 RB6209 40ca1e2b98f13b04f93094d4c831bd64 398 Gene3D G3DSA:3.30.420.40 48 178 3.1E-35 T 11-11-2016 RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 Gene3D G3DSA:3.20.20.220 159 461 8.9E-65 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 Pfam PF00171 Aldehyde dehydrogenase family 579 1010 2.5E-100 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 Gene3D G3DSA:3.40.605.10 568 799 1.0E-47 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 Gene3D G3DSA:3.40.309.10 800 990 4.4E-38 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 784 791 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 812 823 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 SUPERFAMILY SSF53720 579 1009 8.9E-101 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 SUPERFAMILY SSF51730 159 469 5.89E-69 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 Pfam PF01619 Proline dehydrogenase 161 456 1.2E-59 T 11-11-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 RB8262 b072c7b0e23e629a602edcdb5657d96b 1237 PIRSF PIRSF000197 1 1230 0.0 T 11-11-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 RB1027 44c49ee9967dea124fe7f54827539bbb 450 Gene3D G3DSA:3.40.50.2000 251 418 6.6E-22 T 11-11-2016 RB1027 44c49ee9967dea124fe7f54827539bbb 450 SUPERFAMILY SSF53756 21 434 2.24E-54 T 11-11-2016 RB1027 44c49ee9967dea124fe7f54827539bbb 450 Pfam PF00534 Glycosyl transferases group 1 249 418 1.3E-28 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB4292 38833d1c96e75d68757767dff633c300 959 SUPERFAMILY SSF50952 599 949 3.14E-28 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB4292 38833d1c96e75d68757767dff633c300 959 Pfam PF07995 Glucose / Sorbosone dehydrogenase 620 947 5.1E-36 T 11-11-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RB4292 38833d1c96e75d68757767dff633c300 959 Gene3D G3DSA:2.120.10.30 595 957 9.9E-90 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB4292 38833d1c96e75d68757767dff633c300 959 Pfam PF12902 Ferritin-like 51 263 7.0E-43 T 11-11-2016 RB282 bfccd1e097defa498698bebb8c3baa99 342 SUPERFAMILY SSF88723 146 273 1.77E-21 T 11-11-2016 IPR029060 PIN domain-like RB282 bfccd1e097defa498698bebb8c3baa99 342 Pfam PF01938 TRAM domain 293 325 1.1E-4 T 11-11-2016 IPR002792 TRAM domain RB282 bfccd1e097defa498698bebb8c3baa99 342 Gene3D G3DSA:3.40.50.1010 146 274 8.4E-25 T 11-11-2016 IPR029060 PIN domain-like RB282 bfccd1e097defa498698bebb8c3baa99 342 SMART SM00670 144 253 3.9E-10 T 11-11-2016 IPR002716 PIN domain RB2543 1ed6baa43b24659b0c60d596de116638 691 Gene3D G3DSA:2.40.50.140 569 653 1.6E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 SUPERFAMILY SSF50249 215 295 2.75E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 SUPERFAMILY SSF50249 464 562 9.61E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 Gene3D G3DSA:2.40.50.140 479 561 4.1E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 SUPERFAMILY SSF50249 299 406 3.07E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 SMART SM00316 226 293 3.7E-7 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2543 1ed6baa43b24659b0c60d596de116638 691 SMART SM00316 572 643 5.9E-27 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2543 1ed6baa43b24659b0c60d596de116638 691 SMART SM00316 137 210 1.6E-4 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2543 1ed6baa43b24659b0c60d596de116638 691 SMART SM00316 484 556 1.1E-26 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2543 1ed6baa43b24659b0c60d596de116638 691 SMART SM00316 397 469 8.0E-23 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2543 1ed6baa43b24659b0c60d596de116638 691 SMART SM00316 312 382 3.2E-25 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2543 1ed6baa43b24659b0c60d596de116638 691 Gene3D G3DSA:2.40.50.140 223 294 2.8E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 231 247 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 139 157 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 412 431 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 157 171 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 207 226 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 277 297 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 248 265 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 334 355 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 PRINTS PR00681 Ribosomal protein S1 signature 452 470 1.0E-63 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2543 1ed6baa43b24659b0c60d596de116638 691 SUPERFAMILY SSF50249 125 235 9.24E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 Gene3D G3DSA:2.40.50.140 139 222 2.8E-8 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 Gene3D G3DSA:2.40.50.140 314 399 3.7E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 Gene3D G3DSA:2.40.50.140 400 478 1.2E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 SUPERFAMILY SSF50249 569 659 5.0E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2543 1ed6baa43b24659b0c60d596de116638 691 Pfam PF00575 S1 RNA binding domain 311 382 2.1E-19 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2543 1ed6baa43b24659b0c60d596de116638 691 Pfam PF00575 S1 RNA binding domain 225 293 5.1E-9 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2543 1ed6baa43b24659b0c60d596de116638 691 Pfam PF00575 S1 RNA binding domain 571 643 3.3E-22 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2543 1ed6baa43b24659b0c60d596de116638 691 Pfam PF00575 S1 RNA binding domain 137 196 1.4E-4 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2543 1ed6baa43b24659b0c60d596de116638 691 Pfam PF00575 S1 RNA binding domain 484 556 2.7E-18 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2543 1ed6baa43b24659b0c60d596de116638 691 Pfam PF00575 S1 RNA binding domain 398 469 6.2E-17 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2543 1ed6baa43b24659b0c60d596de116638 691 SUPERFAMILY SSF50249 379 486 4.55E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB11462 931228cfdae8fa62fdb102fb2c836ca1 129 Gene3D G3DSA:3.40.50.720 2 128 4.3E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11462 931228cfdae8fa62fdb102fb2c836ca1 129 SMART SM00881 7 99 5.1E-17 T 11-11-2016 IPR003781 CoA-binding GO:0048037 RB11462 931228cfdae8fa62fdb102fb2c836ca1 129 SUPERFAMILY SSF51735 2 124 1.63E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11462 931228cfdae8fa62fdb102fb2c836ca1 129 Pfam PF13380 CoA binding domain 11 125 4.6E-33 T 11-11-2016 IPR003781 CoA-binding GO:0048037 RB12164 20846e65171db72a17a24f89d16504e3 277 SUPERFAMILY SSF55811 250 271 4.06E-27 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB12164 20846e65171db72a17a24f89d16504e3 277 SUPERFAMILY SSF55811 72 223 4.06E-27 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB12164 20846e65171db72a17a24f89d16504e3 277 Gene3D G3DSA:3.90.79.10 82 274 1.3E-29 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB12164 20846e65171db72a17a24f89d16504e3 277 ProSitePatterns PS00893 Nudix box signature. 126 147 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RB12164 20846e65171db72a17a24f89d16504e3 277 Pfam PF00293 NUDIX domain 86 206 2.8E-15 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 292 304 3.0E-14 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 348 360 3.0E-14 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 333 348 3.0E-14 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 361 376 3.0E-14 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 SUPERFAMILY SSF50891 259 412 2.34E-45 T 11-11-2016 IPR029000 Cyclophilin-like domain RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 Gene3D G3DSA:2.40.100.10 245 409 4.8E-51 T 11-11-2016 IPR029000 Cyclophilin-like domain RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 253 402 4.4E-37 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 SUPERFAMILY SSF52833 110 180 6.74E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 287 304 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 Pfam PF07595 Planctomycete extracellular 35 57 9.8E-6 T 11-11-2016 IPR011506 Planctomycete extracellular RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 Gene3D G3DSA:3.40.30.10 99 192 2.9E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 SUPERFAMILY SSF49313 669 748 4.39E-7 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB6278 fec4c34d093dc15cbd1363226cc8de08 1541 Pfam PF05345 Putative Ig domain 693 733 1.7E-5 T 11-11-2016 IPR008009 Putative Ig RB5140 cbde2024da649343ce6317d155a9bc99 613 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 121 200 7.9E-10 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB5140 cbde2024da649343ce6317d155a9bc99 613 SUPERFAMILY SSF51735 51 105 8.5E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5140 cbde2024da649343ce6317d155a9bc99 613 SUPERFAMILY SSF51735 132 247 8.5E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5140 cbde2024da649343ce6317d155a9bc99 613 Gene3D G3DSA:3.30.360.10 527 565 8.1E-18 T 11-11-2016 RB5140 cbde2024da649343ce6317d155a9bc99 613 Gene3D G3DSA:3.30.360.10 445 492 8.1E-18 T 11-11-2016 RB5140 cbde2024da649343ce6317d155a9bc99 613 Gene3D G3DSA:3.30.360.10 226 256 8.1E-18 T 11-11-2016 RB5140 cbde2024da649343ce6317d155a9bc99 613 Gene3D G3DSA:3.30.360.10 338 408 8.1E-18 T 11-11-2016 RB5140 cbde2024da649343ce6317d155a9bc99 613 Gene3D G3DSA:3.40.50.720 58 225 3.0E-23 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5140 cbde2024da649343ce6317d155a9bc99 613 SUPERFAMILY SSF55347 333 425 2.94E-9 T 11-11-2016 RB5140 cbde2024da649343ce6317d155a9bc99 613 SUPERFAMILY SSF55347 461 489 2.94E-9 T 11-11-2016 RB12438 fa6882d2fb32c75ea637ec596d06951b 280 SMART SM00382 55 239 7.5E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB12438 fa6882d2fb32c75ea637ec596d06951b 280 Gene3D G3DSA:3.40.50.300 26 261 2.5E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12438 fa6882d2fb32c75ea637ec596d06951b 280 SUPERFAMILY SSF52540 30 256 5.94E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12438 fa6882d2fb32c75ea637ec596d06951b 280 Pfam PF00005 ABC transporter 48 191 1.0E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 32 729 6.5E-212 T 11-11-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 SUPERFAMILY SSF53706 36 612 1.83E-126 T 11-11-2016 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 SUPERFAMILY SSF50692 619 729 4.07E-19 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 Pfam PF00384 Molybdopterin oxidoreductase 116 486 1.5E-35 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 Pfam PF01568 Molydopterin dinucleotide binding domain 623 724 3.6E-21 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 PIRSF PIRSF000144 5 731 2.0E-175 T 11-11-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 Gene3D G3DSA:3.40.228.10 182 381 8.0E-55 T 11-11-2016 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 Gene3D G3DSA:3.40.50.740 109 181 6.5E-46 T 11-11-2016 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 Gene3D G3DSA:3.40.50.740 382 606 6.5E-46 T 11-11-2016 RB8598 1508e9d2ab3f87dad4b0903114b6363e 731 Gene3D G3DSA:2.40.40.20 619 728 7.8E-15 T 11-11-2016 RB6971 71c11a1c05279ca2c7d20f690435dd7a 714 Pfam PF07583 Protein of unknown function (DUF1549) 151 319 1.1E-19 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB6971 71c11a1c05279ca2c7d20f690435dd7a 714 Pfam PF07587 Protein of unknown function (DUF1553) 449 676 3.1E-20 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB11668 5db125e76bd65670862d24db5ab121ad 317 SMART SM00387 193 316 1.7E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11668 5db125e76bd65670862d24db5ab121ad 317 SMART SM00388 87 152 7.7E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11668 5db125e76bd65670862d24db5ab121ad 317 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 193 314 1.6E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11668 5db125e76bd65670862d24db5ab121ad 317 Pfam PF00512 His Kinase A (phospho-acceptor) domain 87 151 3.5E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11668 5db125e76bd65670862d24db5ab121ad 317 Gene3D G3DSA:1.10.287.130 78 148 2.5E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11668 5db125e76bd65670862d24db5ab121ad 317 Gene3D G3DSA:3.30.565.10 156 315 1.1E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11668 5db125e76bd65670862d24db5ab121ad 317 SUPERFAMILY SSF47384 75 150 3.53E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11668 5db125e76bd65670862d24db5ab121ad 317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 245 259 1.4E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11668 5db125e76bd65670862d24db5ab121ad 317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 273 1.4E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11668 5db125e76bd65670862d24db5ab121ad 317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 313 1.4E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11668 5db125e76bd65670862d24db5ab121ad 317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 294 1.4E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11668 5db125e76bd65670862d24db5ab121ad 317 SUPERFAMILY SSF55874 142 314 1.7E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5178 95eca99fc0bae9699c46910b649098a6 506 Pfam PF03129 Anticodon binding domain 308 406 3.8E-10 T 11-11-2016 IPR004154 Anticodon-binding RB5178 95eca99fc0bae9699c46910b649098a6 506 Gene3D G3DSA:3.40.50.800 302 424 1.9E-26 T 11-11-2016 IPR004154 Anticodon-binding RB5178 95eca99fc0bae9699c46910b649098a6 506 Hamap MF_01571 Proline--tRNA ligase [proS]. 15 506 41.345 T 11-11-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 RB5178 95eca99fc0bae9699c46910b649098a6 506 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 451 506 6.3E-9 T 11-11-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 RB5178 95eca99fc0bae9699c46910b649098a6 506 SUPERFAMILY SSF52954 297 426 6.71E-26 T 11-11-2016 IPR004154 Anticodon-binding RB5178 95eca99fc0bae9699c46910b649098a6 506 SMART SM00946 434 506 1.6E-18 T 11-11-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 RB5178 95eca99fc0bae9699c46910b649098a6 506 SUPERFAMILY SSF64586 433 506 8.04E-13 T 11-11-2016 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 RB5178 95eca99fc0bae9699c46910b649098a6 506 Gene3D G3DSA:3.30.110.30 430 505 1.1E-15 T 11-11-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 RB5178 95eca99fc0bae9699c46910b649098a6 506 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 18 506 2.9E-150 T 11-11-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 RB5178 95eca99fc0bae9699c46910b649098a6 506 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 122 289 9.0E-15 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB5178 95eca99fc0bae9699c46910b649098a6 506 Gene3D G3DSA:3.30.930.10 17 301 2.8E-106 T 11-11-2016 RB5178 95eca99fc0bae9699c46910b649098a6 506 SUPERFAMILY SSF55681 19 295 4.97E-72 T 11-11-2016 RB12730 8c7a3d920ca501cb5a3fa030b118e3a3 193 SUPERFAMILY SSF88946 27 107 5.49E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12730 8c7a3d920ca501cb5a3fa030b118e3a3 193 Pfam PF04542 Sigma-70 region 2 29 96 5.1E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12730 8c7a3d920ca501cb5a3fa030b118e3a3 193 Gene3D G3DSA:1.10.10.10 121 184 5.9E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB12730 8c7a3d920ca501cb5a3fa030b118e3a3 193 Pfam PF08281 Sigma-70, region 4 126 178 2.9E-9 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12730 8c7a3d920ca501cb5a3fa030b118e3a3 193 SUPERFAMILY SSF88659 120 184 7.1E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12730 8c7a3d920ca501cb5a3fa030b118e3a3 193 Gene3D G3DSA:1.10.1740.10 27 97 2.7E-13 T 11-11-2016 RB12730 8c7a3d920ca501cb5a3fa030b118e3a3 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 181 1.0E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12499 8478361e490637732aa0ea42b83aa041 160 Pfam PF02050 Flagellar FliJ protein 20 141 2.5E-11 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 RB12499 8478361e490637732aa0ea42b83aa041 160 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 145 2.7E-34 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 RB11506 c1c54f6b5fabf03910ef281c15920aa0 70 Gene3D G3DSA:3.30.429.20 1 64 1.3E-24 T 11-11-2016 RB11506 c1c54f6b5fabf03910ef281c15920aa0 70 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 6.0E-17 T 11-11-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 RB11506 c1c54f6b5fabf03910ef281c15920aa0 70 SUPERFAMILY SSF55331 2 65 4.06E-20 T 11-11-2016 IPR014347 Tautomerase/MIF superfamily RB11506 c1c54f6b5fabf03910ef281c15920aa0 70 Pfam PF01361 Tautomerase enzyme 2 55 1.5E-17 T 11-11-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RB3804 318ff3ee27458956fa1a1f2b8b5efc7b 1262 Gene3D G3DSA:2.60.120.200 100 286 1.4E-13 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB3804 318ff3ee27458956fa1a1f2b8b5efc7b 1262 Pfam PF07587 Protein of unknown function (DUF1553) 922 1179 3.5E-50 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB3804 318ff3ee27458956fa1a1f2b8b5efc7b 1262 Pfam PF07583 Protein of unknown function (DUF1549) 687 860 6.2E-29 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB3804 318ff3ee27458956fa1a1f2b8b5efc7b 1262 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 125 285 1.1E-11 T 11-11-2016 RB3804 318ff3ee27458956fa1a1f2b8b5efc7b 1262 Pfam PF07635 Planctomycete cytochrome C 601 659 2.9E-17 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB3804 318ff3ee27458956fa1a1f2b8b5efc7b 1262 Gene3D G3DSA:1.10.760.10 577 674 8.5E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3804 318ff3ee27458956fa1a1f2b8b5efc7b 1262 SUPERFAMILY SSF46626 587 678 3.77E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3804 318ff3ee27458956fa1a1f2b8b5efc7b 1262 SUPERFAMILY SSF49899 94 289 3.9E-19 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB9791 a167a68659d8db2752333377ca23cb57 319 Gene3D G3DSA:3.40.140.10 196 318 4.4E-42 T 11-11-2016 RB9791 a167a68659d8db2752333377ca23cb57 319 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 271 276 - T 11-11-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site RB9791 a167a68659d8db2752333377ca23cb57 319 Pfam PF04002 RadC-like JAB domain 197 318 1.9E-41 T 11-11-2016 IPR025657 RadC-like JAB domain RB9791 a167a68659d8db2752333377ca23cb57 319 TIGRFAM TIGR00608 radc: DNA repair protein RadC 100 319 5.6E-54 T 11-11-2016 IPR001405 RadC protein RB10380 35896011ac9e5160848edd907a5f2420 300 Pfam PF07608 Protein of unknown function (DUF1571) 80 298 5.6E-82 T 11-11-2016 IPR011465 Protein of unknown function DUF1571 RB6599 3872f6215dfaed4292a2d6aba6859602 525 Gene3D G3DSA:3.30.1120.10 434 517 1.4E-19 T 11-11-2016 RB6599 3872f6215dfaed4292a2d6aba6859602 525 Gene3D G3DSA:3.40.720.10 51 429 7.0E-107 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB6599 3872f6215dfaed4292a2d6aba6859602 525 Pfam PF00884 Sulfatase 54 407 1.7E-68 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB6599 3872f6215dfaed4292a2d6aba6859602 525 SUPERFAMILY SSF53649 53 511 6.41E-120 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6599 3872f6215dfaed4292a2d6aba6859602 525 Pfam PF16347 Domain of unknown function (DUF4976) 416 508 1.1E-7 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB6599 3872f6215dfaed4292a2d6aba6859602 525 ProSitePatterns PS00523 Sulfatases signature 1. 100 112 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 331 2.8E-59 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 282 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 346 367 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.3E-68 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 283 1.3E-33 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.3E-33 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 1.3E-33 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 1.3E-33 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.3E-33 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 Gene3D G3DSA:3.50.50.60 153 261 3.9E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 Gene3D G3DSA:3.50.50.60 262 339 7.5E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 Gene3D G3DSA:3.50.50.60 4 151 4.5E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 466 2.4E-142 T 11-11-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 SUPERFAMILY SSF51905 5 384 1.3E-59 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 457 7.0E-32 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 SUPERFAMILY SSF55424 346 467 5.33E-37 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 PIRSF PIRSF000350 1 462 2.2E-79 T 11-11-2016 RB1231 59d7ac07f3a0c3ab88fb3e3ad4f0a6b7 475 Gene3D G3DSA:3.30.390.30 340 464 3.3E-43 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB9855 6227bb23ad7621c8288423060015e5e4 463 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 89 178 3.7E-8 T 11-11-2016 RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 1.0E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 197 1.0E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 105 116 1.0E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 165 193 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB7081 ac99e43261fe5abd31f0840779fee289 273 Gene3D G3DSA:3.40.50.720 22 272 1.5E-85 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 216 1.6E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 234 254 1.6E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 197 1.6E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 168 1.6E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 105 116 1.6E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 30 47 1.6E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7081 ac99e43261fe5abd31f0840779fee289 273 SUPERFAMILY SSF51735 28 272 5.32E-83 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7081 ac99e43261fe5abd31f0840779fee289 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 37 271 5.7E-65 T 11-11-2016 RB7081 ac99e43261fe5abd31f0840779fee289 273 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 29 209 0.0014 T 11-11-2016 RB7247 490238c3125dce2ef3cdc06d24a0c7ea 366 Pfam PF00120 Glutamine synthetase, catalytic domain 122 258 9.6E-15 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RB7247 490238c3125dce2ef3cdc06d24a0c7ea 366 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 242 258 - T 11-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RB7247 490238c3125dce2ef3cdc06d24a0c7ea 366 SMART SM01230 115 357 1.9E-50 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RB7247 490238c3125dce2ef3cdc06d24a0c7ea 366 ProSitePatterns PS00180 Glutamine synthetase signature 1. 67 84 - T 11-11-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RB7247 490238c3125dce2ef3cdc06d24a0c7ea 366 Gene3D G3DSA:3.30.590.10 122 356 2.7E-55 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RB7247 490238c3125dce2ef3cdc06d24a0c7ea 366 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 29 108 3.0E-15 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RB7247 490238c3125dce2ef3cdc06d24a0c7ea 366 SUPERFAMILY SSF54368 31 114 6.67E-11 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RB7247 490238c3125dce2ef3cdc06d24a0c7ea 366 SUPERFAMILY SSF55931 122 357 2.06E-59 T 11-11-2016 RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 66 299 5.4E-56 T 11-11-2016 RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 263 283 1.0E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 147 1.0E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 198 1.0E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 246 1.0E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 227 1.0E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 78 1.0E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 195 223 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 Gene3D G3DSA:3.40.50.720 55 300 1.6E-76 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 188 196 3.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 147 3.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 3.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4404 f456a15bc1dccdbfdb361d3fed4d0dc1 302 SUPERFAMILY SSF51735 58 300 3.5E-75 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12902 b378b0abce26f8bdc431a6e44ef464c6 305 Gene3D G3DSA:3.30.200.20 24 148 5.2E-17 T 11-11-2016 RB12902 b378b0abce26f8bdc431a6e44ef464c6 305 Gene3D G3DSA:1.10.510.10 149 294 2.6E-34 T 11-11-2016 RB12902 b378b0abce26f8bdc431a6e44ef464c6 305 SUPERFAMILY SSF56112 26 294 3.24E-46 T 11-11-2016 IPR011009 Protein kinase-like domain RB12902 b378b0abce26f8bdc431a6e44ef464c6 305 Pfam PF00069 Protein kinase domain 36 293 3.3E-36 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB13317 18e3b7240743beb45c55e3dba6fc7854 409 SUPERFAMILY SSF52266 114 190 2.56E-14 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB13317 18e3b7240743beb45c55e3dba6fc7854 409 SUPERFAMILY SSF52266 329 401 2.56E-14 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB13317 18e3b7240743beb45c55e3dba6fc7854 409 SUPERFAMILY SSF52266 261 292 2.56E-14 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB13317 18e3b7240743beb45c55e3dba6fc7854 409 Gene3D G3DSA:3.40.50.1110 114 185 6.5E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB13317 18e3b7240743beb45c55e3dba6fc7854 409 Gene3D G3DSA:3.40.50.1110 258 402 6.5E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB12745 79d311f78d5f125e5cf8b772a7b39f0a 413 SUPERFAMILY SSF56042 229 409 7.92E-50 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB12745 79d311f78d5f125e5cf8b772a7b39f0a 413 Pfam PF02769 AIR synthase related protein, C-terminal domain 234 409 4.7E-25 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB12745 79d311f78d5f125e5cf8b772a7b39f0a 413 Gene3D G3DSA:3.30.1330.10 74 226 6.7E-54 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB12745 79d311f78d5f125e5cf8b772a7b39f0a 413 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 58 403 1.1E-120 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB12745 79d311f78d5f125e5cf8b772a7b39f0a 413 SUPERFAMILY SSF55326 57 226 5.83E-45 T 11-11-2016 RB12745 79d311f78d5f125e5cf8b772a7b39f0a 413 Pfam PF00586 AIR synthase related protein, N-terminal domain 120 221 3.7E-14 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB12745 79d311f78d5f125e5cf8b772a7b39f0a 413 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 57 412 42.839 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB12745 79d311f78d5f125e5cf8b772a7b39f0a 413 Gene3D G3DSA:3.90.650.10 230 409 6.8E-57 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB3951 ffcdf34af4e5675c78cd8f2141470f66 527 Gene3D G3DSA:2.120.10.30 67 395 9.1E-18 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3951 ffcdf34af4e5675c78cd8f2141470f66 527 SUPERFAMILY SSF50952 67 388 2.35E-9 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB1103 95e143978c30fcebe066efb03bf990fb 441 Pfam PF08245 Mur ligase middle domain 38 157 5.9E-8 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB1103 95e143978c30fcebe066efb03bf990fb 441 PRINTS PR01758 Capsule biosynthesis protein CapB signature 112 127 3.2E-27 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 RB1103 95e143978c30fcebe066efb03bf990fb 441 PRINTS PR01758 Capsule biosynthesis protein CapB signature 60 77 3.2E-27 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 RB1103 95e143978c30fcebe066efb03bf990fb 441 PRINTS PR01758 Capsule biosynthesis protein CapB signature 141 156 3.2E-27 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 RB1103 95e143978c30fcebe066efb03bf990fb 441 PRINTS PR01758 Capsule biosynthesis protein CapB signature 299 314 3.2E-27 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 RB1103 95e143978c30fcebe066efb03bf990fb 441 PRINTS PR01758 Capsule biosynthesis protein CapB signature 37 53 3.2E-27 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 RB1103 95e143978c30fcebe066efb03bf990fb 441 PRINTS PR01758 Capsule biosynthesis protein CapB signature 264 281 3.2E-27 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 RB1103 95e143978c30fcebe066efb03bf990fb 441 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 6 418 2.5E-170 T 11-11-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 RB1103 95e143978c30fcebe066efb03bf990fb 441 SUPERFAMILY SSF53623 8 250 6.28E-19 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB1103 95e143978c30fcebe066efb03bf990fb 441 Gene3D G3DSA:3.40.1190.10 34 245 2.7E-14 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB8076 5e770685312b925fb0040790c928ed6a 173 SMART SM00732 16 116 1.2E-20 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RB8076 5e770685312b925fb0040790c928ed6a 173 SUPERFAMILY SSF53098 16 149 1.82E-33 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB8076 5e770685312b925fb0040790c928ed6a 173 Pfam PF03652 Holliday junction resolvase 17 148 1.5E-36 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RB8076 5e770685312b925fb0040790c928ed6a 173 Gene3D G3DSA:3.30.420.140 16 151 8.6E-41 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RB8076 5e770685312b925fb0040790c928ed6a 173 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 16 151 19.817 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RB8076 5e770685312b925fb0040790c928ed6a 173 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 21 148 1.8E-25 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RB4394 8d1c11d9c9335e9e7b89188a76727ffb 188 Pfam PF01965 DJ-1/PfpI family 9 176 2.1E-58 T 11-11-2016 IPR002818 DJ-1/PfpI RB4394 8d1c11d9c9335e9e7b89188a76727ffb 188 SUPERFAMILY SSF52317 8 178 7.55E-51 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB4394 8d1c11d9c9335e9e7b89188a76727ffb 188 Gene3D G3DSA:3.40.50.880 3 186 7.7E-63 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB4394 8d1c11d9c9335e9e7b89188a76727ffb 188 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 11 175 1.9E-53 T 11-11-2016 IPR006286 Peptidase C56, PfpI RB4454 5b28cddf9fad89ad485034922e16a254 739 Pfam PF07196 Flagellin hook IN motif 474 518 1.1E-6 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 RB4454 5b28cddf9fad89ad485034922e16a254 739 SUPERFAMILY SSF64518 399 435 6.41E-60 T 11-11-2016 RB4454 5b28cddf9fad89ad485034922e16a254 739 SUPERFAMILY SSF64518 62 252 6.41E-60 T 11-11-2016 RB4454 5b28cddf9fad89ad485034922e16a254 739 SUPERFAMILY SSF64518 542 738 6.41E-60 T 11-11-2016 RB4454 5b28cddf9fad89ad485034922e16a254 739 Gene3D G3DSA:1.20.1330.10 114 201 6.7E-24 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB4454 5b28cddf9fad89ad485034922e16a254 739 Gene3D G3DSA:1.20.1330.10 597 694 6.7E-24 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB4454 5b28cddf9fad89ad485034922e16a254 739 PRINTS PR00207 Flagellin signature 136 155 2.4E-10 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB4454 5b28cddf9fad89ad485034922e16a254 739 PRINTS PR00207 Flagellin signature 97 114 2.4E-10 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB4454 5b28cddf9fad89ad485034922e16a254 739 PRINTS PR00207 Flagellin signature 172 195 2.4E-10 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB4454 5b28cddf9fad89ad485034922e16a254 739 Pfam PF00669 Bacterial flagellin N-terminal helical region 65 203 6.2E-29 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB4454 5b28cddf9fad89ad485034922e16a254 739 Pfam PF00700 Bacterial flagellin C-terminal helical region 653 738 1.0E-16 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB7807 56456def4b7069d2a6c462c48b6edcd0 271 SUPERFAMILY SSF53335 89 268 1.78E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB7807 56456def4b7069d2a6c462c48b6edcd0 271 Pfam PF02390 Putative methyltransferase 90 264 1.2E-32 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RB7807 56456def4b7069d2a6c462c48b6edcd0 271 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 83 269 6.1E-35 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RB7807 56456def4b7069d2a6c462c48b6edcd0 271 Gene3D G3DSA:3.40.50.150 94 227 5.0E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB7807 56456def4b7069d2a6c462c48b6edcd0 271 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 50 270 24.772 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RB410 92e38794f200ab25979ccbd976f426b1 342 SUPERFAMILY SSF47648 13 79 5.89E-14 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB410 92e38794f200ab25979ccbd976f426b1 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 14 342 33.081 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 RB410 92e38794f200ab25979ccbd976f426b1 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 14 74 2.4E-11 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB410 92e38794f200ab25979ccbd976f426b1 342 SUPERFAMILY SSF52418 83 342 2.75E-85 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB410 92e38794f200ab25979ccbd976f426b1 342 Gene3D G3DSA:3.40.1030.10 85 342 3.5E-92 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB410 92e38794f200ab25979ccbd976f426b1 342 Gene3D G3DSA:1.20.970.10 13 76 2.3E-16 T 11-11-2016 RB410 92e38794f200ab25979ccbd976f426b1 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 22 341 7.3E-105 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 RB410 92e38794f200ab25979ccbd976f426b1 342 Pfam PF00591 Glycosyl transferase family, a/b domain 84 333 8.8E-85 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB5519 58f90684613bdee9fc69b4938c5c4921 158 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 33 53 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5519 58f90684613bdee9fc69b4938c5c4921 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 70 88 3.3E-7 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RB5519 58f90684613bdee9fc69b4938c5c4921 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 34 59 3.3E-7 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RB5519 58f90684613bdee9fc69b4938c5c4921 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 32 55 3.9E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5519 58f90684613bdee9fc69b4938c5c4921 158 Gene3D G3DSA:3.30.700.10 35 116 2.6E-4 T 11-11-2016 RB5519 58f90684613bdee9fc69b4938c5c4921 158 SUPERFAMILY SSF54523 62 154 1.57E-17 T 11-11-2016 RB5519 58f90684613bdee9fc69b4938c5c4921 158 Pfam PF08334 Type II secretion system (T2SS), protein G 57 152 2.3E-18 T 11-11-2016 IPR013545 Type II secretion system protein G RB11886 5054d4ee37dba35a059c7960493b8109 933 Pfam PF07627 Protein of unknown function (DUF1588) 744 841 1.5E-30 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB11886 5054d4ee37dba35a059c7960493b8109 933 Pfam PF07631 Protein of unknown function (DUF1592) 599 725 4.0E-37 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB11886 5054d4ee37dba35a059c7960493b8109 933 Pfam PF07624 Protein of unknown function (DUF1585) 857 930 3.8E-23 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB11886 5054d4ee37dba35a059c7960493b8109 933 Pfam PF07626 Protein of unknown function (DUF1587) 195 259 1.3E-15 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB11886 5054d4ee37dba35a059c7960493b8109 933 SUPERFAMILY SSF46626 102 175 2.9E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11886 5054d4ee37dba35a059c7960493b8109 933 Pfam PF07637 Protein of unknown function (DUF1595) 524 584 1.6E-19 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB11886 5054d4ee37dba35a059c7960493b8109 933 Pfam PF07635 Planctomycete cytochrome C 111 158 2.9E-9 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB11886 5054d4ee37dba35a059c7960493b8109 933 Gene3D G3DSA:1.10.760.10 106 176 4.1E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12724 8062c70696f0fa3eb86e255fa8749540 608 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 31 45 2.7E-30 T 11-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RB12724 8062c70696f0fa3eb86e255fa8749540 608 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 207 224 2.7E-30 T 11-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RB12724 8062c70696f0fa3eb86e255fa8749540 608 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 66 86 2.7E-30 T 11-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RB12724 8062c70696f0fa3eb86e255fa8749540 608 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 226 244 2.7E-30 T 11-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RB12724 8062c70696f0fa3eb86e255fa8749540 608 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 249 269 2.7E-30 T 11-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RB12724 8062c70696f0fa3eb86e255fa8749540 608 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 35 41 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RB12724 8062c70696f0fa3eb86e255fa8749540 608 Pfam PF01555 DNA methylase 32 263 9.0E-46 T 11-11-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RB12724 8062c70696f0fa3eb86e255fa8749540 608 Gene3D G3DSA:3.40.50.150 14 272 1.1E-57 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12724 8062c70696f0fa3eb86e255fa8749540 608 SUPERFAMILY SSF53335 12 272 2.12E-60 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 479 80.54 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 478 1.0E-180 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 SUPERFAMILY SSF51735 3 189 5.12E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 477 1.5E-110 T 11-11-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 317 343 8.6E-45 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 8.6E-45 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 8.6E-45 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 8.6E-45 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 8.6E-45 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 Gene3D G3DSA:3.30.360.10 186 477 9.5E-116 T 11-11-2016 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 11-11-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 PIRSF PIRSF000110 1 481 3.8E-190 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 Gene3D G3DSA:3.40.50.720 3 185 2.6E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 6 186 1.2E-60 T 11-11-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RB2735 aa54f1c0e182c7168807bc553fbfd8b9 484 SUPERFAMILY SSF55347 181 478 6.21E-107 T 11-11-2016 RB10359 4b14f7a5315a2082276a4e70966505e7 280 Gene3D G3DSA:3.40.1280.10 2 277 9.1E-62 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RB10359 4b14f7a5315a2082276a4e70966505e7 280 SUPERFAMILY SSF88697 2 69 3.48E-16 T 11-11-2016 IPR015947 PUA-like domain RB10359 4b14f7a5315a2082276a4e70966505e7 280 SUPERFAMILY SSF75217 226 278 6.73E-33 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases RB10359 4b14f7a5315a2082276a4e70966505e7 280 SUPERFAMILY SSF75217 74 179 6.73E-33 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases RB10359 4b14f7a5315a2082276a4e70966505e7 280 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 162 5.7E-30 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB10359 4b14f7a5315a2082276a4e70966505e7 280 PIRSF PIRSF015601 1 280 5.4E-83 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB10359 4b14f7a5315a2082276a4e70966505e7 280 Pfam PF04452 RNA methyltransferase 221 277 2.3E-13 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB10359 4b14f7a5315a2082276a4e70966505e7 280 Pfam PF04452 RNA methyltransferase 17 168 3.0E-36 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB10524 2ac6f5384a056b57f8caea376f456276 1257 SUPERFAMILY SSF47781 662 736 1.26E-6 T 11-11-2016 IPR010994 RuvA domain 2-like RB10524 2ac6f5384a056b57f8caea376f456276 1257 Gene3D G3DSA:1.10.150.310 691 778 3.3E-11 T 11-11-2016 IPR023097 Tex RuvX-like domain RB10524 2ac6f5384a056b57f8caea376f456276 1257 Gene3D G3DSA:1.10.3500.10 641 689 1.4E-8 T 11-11-2016 IPR023323 Tex-like domain RB10524 2ac6f5384a056b57f8caea376f456276 1257 Gene3D G3DSA:1.10.3500.10 133 230 1.4E-8 T 11-11-2016 IPR023323 Tex-like domain RB10524 2ac6f5384a056b57f8caea376f456276 1257 Gene3D G3DSA:1.10.3500.10 405 512 1.4E-8 T 11-11-2016 IPR023323 Tex-like domain RB10524 2ac6f5384a056b57f8caea376f456276 1257 Gene3D G3DSA:1.10.10.650 6 103 1.2E-12 T 11-11-2016 IPR023319 Tex-like protein, HTH domain RB10524 2ac6f5384a056b57f8caea376f456276 1257 SUPERFAMILY SSF50249 964 1059 1.19E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10524 2ac6f5384a056b57f8caea376f456276 1257 SMART SM00316 980 1051 4.5E-19 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB10524 2ac6f5384a056b57f8caea376f456276 1257 SUPERFAMILY SSF53098 515 659 5.46E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB10524 2ac6f5384a056b57f8caea376f456276 1257 Pfam PF00575 S1 RNA binding domain 979 1049 1.0E-12 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB10524 2ac6f5384a056b57f8caea376f456276 1257 Gene3D G3DSA:3.30.420.140 516 638 1.5E-13 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RB10524 2ac6f5384a056b57f8caea376f456276 1257 SUPERFAMILY SSF158832 6 209 3.66E-21 T 11-11-2016 RB10524 2ac6f5384a056b57f8caea376f456276 1257 Pfam PF09371 Tex-like protein N-terminal domain 9 202 5.4E-11 T 11-11-2016 IPR018974 Tex-like protein, N-terminal RB10524 2ac6f5384a056b57f8caea376f456276 1257 Gene3D G3DSA:2.40.50.140 975 1050 1.3E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10524 2ac6f5384a056b57f8caea376f456276 1257 Pfam PF16921 Tex protein YqgF-like domain 516 638 1.1E-8 T 11-11-2016 IPR032639 Tex protein, YqgF-like domain RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 SMART SM00086 309 351 1.7E-5 T 11-11-2016 IPR001610 PAC motif RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 596 4.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 582 4.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 4.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 635 4.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 Gene3D G3DSA:3.30.450.20 247 351 1.8E-26 T 11-11-2016 RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 SUPERFAMILY SSF55874 484 640 1.24E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 SMART SM00387 527 638 7.9E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 528 635 1.9E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 235 357 7.2E-18 T 11-11-2016 IPR000014 PAS domain RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 SUPERFAMILY SSF55785 246 351 2.09E-24 T 11-11-2016 IPR000014 PAS domain RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 Pfam PF13426 PAS domain 247 350 3.9E-20 T 11-11-2016 IPR000014 PAS domain RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 SMART SM00091 236 303 2.8E-7 T 11-11-2016 IPR000014 PAS domain RB3606 0468b2891a10294f3d5ea4ae56c6b965 651 Gene3D G3DSA:3.30.565.10 488 636 1.6E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB399 95a052c5cce2f4c427878e08203e5c17 517 Gene3D G3DSA:3.40.50.10490 280 499 1.8E-67 T 11-11-2016 RB399 95a052c5cce2f4c427878e08203e5c17 517 SUPERFAMILY SSF53697 120 516 3.89E-91 T 11-11-2016 RB399 95a052c5cce2f4c427878e08203e5c17 517 PRINTS PR00662 Glucose-6-phosphate isomerase signature 279 297 4.6E-23 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 PRINTS PR00662 Glucose-6-phosphate isomerase signature 491 504 4.6E-23 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 PRINTS PR00662 Glucose-6-phosphate isomerase signature 355 376 4.6E-23 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 PRINTS PR00662 Glucose-6-phosphate isomerase signature 459 477 4.6E-23 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 PRINTS PR00662 Glucose-6-phosphate isomerase signature 477 491 4.6E-23 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 PRINTS PR00662 Glucose-6-phosphate isomerase signature 144 163 4.6E-23 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 283 296 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 Pfam PF00342 Phosphoglucose isomerase 405 508 1.7E-5 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 Pfam PF00342 Phosphoglucose isomerase 140 377 2.6E-18 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB399 95a052c5cce2f4c427878e08203e5c17 517 Gene3D G3DSA:3.40.50.10490 139 279 4.7E-21 T 11-11-2016 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 SUPERFAMILY SSF56112 83 352 9.44E-68 T 11-11-2016 IPR011009 Protein kinase-like domain RB6033 1538956e342eed8e5b38ae17f255a9e3 769 Gene3D G3DSA:1.25.40.10 407 576 1.7E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 SMART SM00028 662 695 0.19 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 SMART SM00028 521 554 6.5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 SMART SM00028 710 743 130.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 205 217 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 Pfam PF13374 Tetratricopeptide repeat 661 697 0.011 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 SUPERFAMILY SSF48452 474 634 6.42E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 Gene3D G3DSA:3.30.200.20 81 195 1.7E-27 T 11-11-2016 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 Pfam PF00069 Protein kinase domain 87 292 2.0E-41 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 93 116 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 SUPERFAMILY SSF48452 618 743 2.7E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 SMART SM00220 87 339 7.4E-49 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 Gene3D G3DSA:1.10.510.10 196 335 7.9E-34 T 11-11-2016 RB6033 1538956e342eed8e5b38ae17f255a9e3 769 Gene3D G3DSA:1.25.40.10 577 732 1.1E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4903 914e65f1fce2923ba73587dc767c4f2c 793 ProSitePatterns PS60003 Phosphoketolase signature 2. 159 177 - T 11-11-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 RB4903 914e65f1fce2923ba73587dc767c4f2c 793 Pfam PF09364 XFP N-terminal domain 10 386 1.0E-192 T 11-11-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal RB4903 914e65f1fce2923ba73587dc767c4f2c 793 Pfam PF09363 XFP C-terminal domain 588 789 8.4E-94 T 11-11-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 RB4903 914e65f1fce2923ba73587dc767c4f2c 793 PIRSF PIRSF017245 2 791 0.0 T 11-11-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 RB4903 914e65f1fce2923ba73587dc767c4f2c 793 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 401 577 1.1E-88 T 11-11-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 RB4903 914e65f1fce2923ba73587dc767c4f2c 793 SUPERFAMILY SSF52518 11 370 1.71E-72 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB4903 914e65f1fce2923ba73587dc767c4f2c 793 SUPERFAMILY SSF52518 378 594 4.94E-26 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB4903 914e65f1fce2923ba73587dc767c4f2c 793 ProSitePatterns PS60002 Phosphoketolase signature 1. 146 152 - T 11-11-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 RB4903 914e65f1fce2923ba73587dc767c4f2c 793 Gene3D G3DSA:3.40.50.970 7 368 1.5E-20 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB4903 914e65f1fce2923ba73587dc767c4f2c 793 Hamap MF_01403 Probable phosphoketolase. 7 791 42.155 T 11-11-2016 IPR023962 Probable phosphoketolase RB5543 4eafef9a2c04035211178e685604677d 679 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB5543 4eafef9a2c04035211178e685604677d 679 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 546 678 3.4E-42 T 11-11-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RB5543 4eafef9a2c04035211178e685604677d 679 Pfam PF09334 tRNA synthetases class I (M) 6 392 1.9E-141 T 11-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB5543 4eafef9a2c04035211178e685604677d 679 Gene3D G3DSA:1.10.730.10 377 526 1.1E-31 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB5543 4eafef9a2c04035211178e685604677d 679 Gene3D G3DSA:2.20.28.20 142 172 8.6E-14 T 11-11-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB5543 4eafef9a2c04035211178e685604677d 679 SUPERFAMILY SSF52374 172 383 7.59E-92 T 11-11-2016 RB5543 4eafef9a2c04035211178e685604677d 679 SUPERFAMILY SSF52374 4 138 7.59E-92 T 11-11-2016 RB5543 4eafef9a2c04035211178e685604677d 679 Gene3D G3DSA:2.40.50.140 571 678 4.9E-41 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB5543 4eafef9a2c04035211178e685604677d 679 SUPERFAMILY SSF50249 572 678 4.65E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB5543 4eafef9a2c04035211178e685604677d 679 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 540 38.187 T 11-11-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB5543 4eafef9a2c04035211178e685604677d 679 Pfam PF08264 Anticodon-binding domain of tRNA 421 509 1.1E-5 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RB5543 4eafef9a2c04035211178e685604677d 679 Pfam PF01588 Putative tRNA binding domain 583 676 3.9E-23 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RB5543 4eafef9a2c04035211178e685604677d 679 Gene3D G3DSA:3.40.50.620 179 376 1.7E-83 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB5543 4eafef9a2c04035211178e685604677d 679 Gene3D G3DSA:3.40.50.620 4 141 1.7E-83 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB5543 4eafef9a2c04035211178e685604677d 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 5.3E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RB5543 4eafef9a2c04035211178e685604677d 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 5.3E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RB5543 4eafef9a2c04035211178e685604677d 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 287 302 5.3E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RB5543 4eafef9a2c04035211178e685604677d 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 5.3E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RB5543 4eafef9a2c04035211178e685604677d 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 5.3E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RB5543 4eafef9a2c04035211178e685604677d 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 380 391 5.3E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RB5543 4eafef9a2c04035211178e685604677d 679 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 526 9.2E-156 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RB5543 4eafef9a2c04035211178e685604677d 679 SUPERFAMILY SSF47323 386 542 8.78E-34 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB5543 4eafef9a2c04035211178e685604677d 679 SUPERFAMILY SSF57770 139 172 7.46E-9 T 11-11-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB1833 d3e8d3d13211007201d10173956edf5a 303 SMART SM00900 157 255 2.5E-30 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RB1833 d3e8d3d13211007201d10173956edf5a 303 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 262 5.6E-72 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 RB1833 d3e8d3d13211007201d10173956edf5a 303 PIRSF PIRSF009437 1 269 2.6E-81 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 RB1833 d3e8d3d13211007201d10173956edf5a 303 Pfam PF04205 FMN-binding domain 157 252 4.4E-16 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RB1833 d3e8d3d13211007201d10173956edf5a 303 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 267 33.659 T 11-11-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 RB6331 65cfb73ac50d5870395222b86635b516 375 PIRSF PIRSF000512 1 360 2.8E-144 T 11-11-2016 IPR016229 Thiamine-phosphate synthase, cyanobacterial/bacterial GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RB6331 65cfb73ac50d5870395222b86635b516 375 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 152 356 21.451 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RB6331 65cfb73ac50d5870395222b86635b516 375 SUPERFAMILY SSF51391 149 356 1.18E-48 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RB6331 65cfb73ac50d5870395222b86635b516 375 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 165 339 8.3E-46 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RB6331 65cfb73ac50d5870395222b86635b516 375 Gene3D G3DSA:3.20.20.70 146 358 2.1E-51 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6331 65cfb73ac50d5870395222b86635b516 375 Pfam PF02581 Thiamine monophosphate synthase/TENI 162 337 1.8E-49 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 47 55 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 Hamap MF_00005 Argininosuccinate synthase [argG]. 41 441 45.136 T 11-11-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 SUPERFAMILY SSF52402 37 210 3.75E-42 T 11-11-2016 RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 Gene3D G3DSA:3.40.50.620 39 216 1.2E-51 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 Gene3D G3DSA:3.90.1260.10 217 440 1.9E-86 T 11-11-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 155 166 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 TIGRFAM TIGR00032 argG: argininosuccinate synthase 45 436 5.4E-136 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 Pfam PF00764 Arginosuccinate synthase 45 435 5.6E-139 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB8293 2dead304dc2d4af8e02e7543b9c2a57f 444 SUPERFAMILY SSF69864 216 439 7.46E-83 T 11-11-2016 RB7900 96efb673bc816e3a95c90b01781cecf8 194 Gene3D G3DSA:2.170.150.20 59 191 3.0E-56 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RB7900 96efb673bc816e3a95c90b01781cecf8 194 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 65 190 5.6E-57 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RB7900 96efb673bc816e3a95c90b01781cecf8 194 Pfam PF01641 SelR domain 68 186 1.2E-49 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RB7900 96efb673bc816e3a95c90b01781cecf8 194 SUPERFAMILY SSF51316 64 190 3.4E-54 T 11-11-2016 IPR011057 Mss4-like RB3913 896c8cca3bec37f8764780d7b4b01930 900 SUPERFAMILY SSF51395 21 180 3.66E-5 T 11-11-2016 RB3913 896c8cca3bec37f8764780d7b4b01930 900 Pfam PF01136 Peptidase family U32 94 318 2.7E-80 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RB3913 896c8cca3bec37f8764780d7b4b01930 900 Pfam PF01136 Peptidase family U32 681 864 8.3E-14 T 11-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RB3913 896c8cca3bec37f8764780d7b4b01930 900 Pfam PF12392 Collagenase 463 583 7.7E-20 T 11-11-2016 IPR020988 Peptidase U32, collagenase RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 Gene3D G3DSA:1.10.10.10 114 161 9.6E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 SUPERFAMILY SSF88946 16 114 1.05E-25 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 Pfam PF04545 Sigma-70, region 4 215 260 1.6E-13 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 SUPERFAMILY SSF88659 115 193 9.72E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 PRINTS PR00046 Major sigma-70 factor signature 233 248 3.3E-8 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 PRINTS PR00046 Major sigma-70 factor signature 69 82 3.3E-8 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 PRINTS PR00046 Major sigma-70 factor signature 248 259 3.3E-8 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 PRINTS PR00046 Major sigma-70 factor signature 216 228 3.3E-8 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 Pfam PF04542 Sigma-70 region 2 42 114 1.1E-14 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 Gene3D G3DSA:1.10.10.10 209 266 9.6E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 263 3.1E-30 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 Pfam PF04539 Sigma-70 region 3 122 200 1.0E-9 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 69 82 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 SUPERFAMILY SSF88659 180 264 4.11E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 PIRSF PIRSF000770 32 267 1.6E-42 T 11-11-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 42 263 1.2E-82 T 11-11-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 Gene3D G3DSA:1.10.601.10 37 106 1.8E-17 T 11-11-2016 RB8316 1eb709afd9a3be18a06ee66dca4faf1b 272 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 233 259 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 SMART SM00841 137 192 5.7E-27 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 Pfam PF01132 Elongation factor P (EF-P) OB domain 77 129 2.9E-20 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 SUPERFAMILY SSF50249 136 193 3.22E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 SUPERFAMILY SSF50104 7 69 3.16E-19 T 11-11-2016 IPR008991 Translation protein SH3-like domain RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 SUPERFAMILY SSF50249 73 137 4.71E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 Gene3D G3DSA:2.30.30.30 9 71 3.2E-25 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 Pfam PF09285 Elongation factor P, C-terminal 137 192 1.9E-22 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 Gene3D G3DSA:2.40.50.140 136 193 6.6E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 Hamap MF_00141 Elongation factor P [efp]. 9 193 44.178 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 PIRSF PIRSF005901 8 194 2.8E-66 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 Gene3D G3DSA:2.40.50.140 72 135 1.7E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 12 68 2.5E-23 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 TIGRFAM TIGR00038 efp: translation elongation factor P 10 193 1.0E-72 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 RB1213 0af8e2c1f0357b37670498c23b3a5b8c 195 SMART SM01185 75 129 1.3E-22 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RB12694 9d9c20b35a6f4c1990ad480822959fe4 343 Gene3D G3DSA:1.10.510.10 199 291 7.8E-25 T 11-11-2016 RB12694 9d9c20b35a6f4c1990ad480822959fe4 343 Pfam PF00069 Protein kinase domain 114 288 7.4E-26 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB12694 9d9c20b35a6f4c1990ad480822959fe4 343 SUPERFAMILY SSF56112 84 322 4.72E-42 T 11-11-2016 IPR011009 Protein kinase-like domain RB12694 9d9c20b35a6f4c1990ad480822959fe4 343 Gene3D G3DSA:3.30.200.20 79 198 3.0E-9 T 11-11-2016 RB6935 572218de6590be49e29cc1222cea291e 627 SUPERFAMILY SSF52518 239 501 2.11E-62 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB6935 572218de6590be49e29cc1222cea291e 627 SUPERFAMILY SSF53323 19 257 1.31E-16 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RB6935 572218de6590be49e29cc1222cea291e 627 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 265 470 4.0E-51 T 11-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RB6935 572218de6590be49e29cc1222cea291e 627 Gene3D G3DSA:3.40.50.920 517 618 2.7E-12 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RB6935 572218de6590be49e29cc1222cea291e 627 Gene3D G3DSA:3.40.920.10 19 218 1.5E-25 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RB6935 572218de6590be49e29cc1222cea291e 627 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 18 614 2.5E-206 T 11-11-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 RB6935 572218de6590be49e29cc1222cea291e 627 SUPERFAMILY SSF52922 516 617 1.44E-16 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RB6935 572218de6590be49e29cc1222cea291e 627 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 26 215 6.1E-29 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RB6935 572218de6590be49e29cc1222cea291e 627 Gene3D G3DSA:3.40.50.970 230 431 5.2E-74 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB9116 3d34233a1eaed4fdffc447be41f3f5d5 421 SUPERFAMILY SSF55031 220 324 6.28E-14 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB9116 3d34233a1eaed4fdffc447be41f3f5d5 421 Gene3D G3DSA:3.40.630.10 360 418 8.8E-57 T 11-11-2016 RB9116 3d34233a1eaed4fdffc447be41f3f5d5 421 Gene3D G3DSA:3.40.630.10 19 227 8.8E-57 T 11-11-2016 RB9116 3d34233a1eaed4fdffc447be41f3f5d5 421 SUPERFAMILY SSF53187 12 218 7.86E-45 T 11-11-2016 RB9116 3d34233a1eaed4fdffc447be41f3f5d5 421 SUPERFAMILY SSF53187 337 417 7.86E-45 T 11-11-2016 RB9116 3d34233a1eaed4fdffc447be41f3f5d5 421 Gene3D G3DSA:3.30.70.360 228 328 8.8E-17 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB9116 3d34233a1eaed4fdffc447be41f3f5d5 421 Pfam PF07687 Peptidase dimerisation domain 216 324 4.8E-18 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB9116 3d34233a1eaed4fdffc447be41f3f5d5 421 Pfam PF01546 Peptidase family M20/M25/M40 111 415 7.3E-31 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RB8450 25e43ca29114ee2920932607aeb5b5f0 628 SUPERFAMILY SSF49742 320 469 5.75E-25 T 11-11-2016 IPR008977 PHM/PNGase F domain GO:0003824 RB8450 25e43ca29114ee2920932607aeb5b5f0 628 Pfam PF00578 AhpC/TSA family 53 148 3.0E-7 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB8450 25e43ca29114ee2920932607aeb5b5f0 628 Gene3D G3DSA:2.60.120.230 484 598 2.5E-4 T 11-11-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 RB8450 25e43ca29114ee2920932607aeb5b5f0 628 SUPERFAMILY SSF49742 485 600 1.52E-13 T 11-11-2016 IPR008977 PHM/PNGase F domain GO:0003824 RB8450 25e43ca29114ee2920932607aeb5b5f0 628 SUPERFAMILY SSF52833 51 217 1.32E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8450 25e43ca29114ee2920932607aeb5b5f0 628 Gene3D G3DSA:2.60.120.310 355 469 5.4E-7 T 11-11-2016 IPR000323 Copper type II, ascorbate-dependent monooxygenase, N-terminal GO:0004497|GO:0005507|GO:0016715|GO:0055114 RB8450 25e43ca29114ee2920932607aeb5b5f0 628 SUPERFAMILY SSF46626 217 278 5.63E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8450 25e43ca29114ee2920932607aeb5b5f0 628 Gene3D G3DSA:3.40.30.10 26 170 1.0E-13 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 SUPERFAMILY SSF63446 1739 1800 4.71E-5 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 Pfam PF07595 Planctomycete extracellular 36 58 1.6E-5 T 11-11-2016 IPR011506 Planctomycete extracellular RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 SUPERFAMILY SSF56436 293 383 3.15E-11 T 11-11-2016 IPR016187 C-type lectin fold RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 963 1033 2.1E-8 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 Pfam PF00404 Dockerin type I repeat 1743 1763 1.4E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 SUPERFAMILY SSF89260 556 666 9.94E-7 T 11-11-2016 RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 Gene3D G3DSA:3.10.100.10 293 384 2.1E-11 T 11-11-2016 IPR016186 C-type lectin-like RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 Gene3D G3DSA:2.60.120.380 918 1051 2.2E-13 T 11-11-2016 RB12720 e48efdd73f7fdf5a5bd19c5d4e76152a 1901 Gene3D G3DSA:2.60.120.380 552 667 1.0E-10 T 11-11-2016 RB4129 a69e3ff1952e770d0bcd35c1cb5e1299 426 Pfam PF16257 tagaturonate epimerase 5 410 3.2E-59 T 11-11-2016 IPR032586 Tagaturonate epimerase RB1392 9c7ca95796f238d31654a6aee7e9c169 340 Gene3D G3DSA:1.10.10.10 270 330 6.2E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1392 9c7ca95796f238d31654a6aee7e9c169 340 PRINTS PR00046 Major sigma-70 factor signature 189 202 3.2E-16 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 PRINTS PR00046 Major sigma-70 factor signature 315 326 3.2E-16 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 PRINTS PR00046 Major sigma-70 factor signature 300 315 3.2E-16 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 PRINTS PR00046 Major sigma-70 factor signature 213 221 3.2E-16 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 PRINTS PR00046 Major sigma-70 factor signature 278 290 3.2E-16 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 Gene3D G3DSA:1.10.601.10 18 223 5.9E-30 T 11-11-2016 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 SUPERFAMILY SSF88659 256 331 4.3E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 162 328 3.5E-26 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 Pfam PF04542 Sigma-70 region 2 166 227 6.1E-15 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 SUPERFAMILY SSF88946 98 224 1.31E-30 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1392 9c7ca95796f238d31654a6aee7e9c169 340 Pfam PF04545 Sigma-70, region 4 275 328 1.0E-14 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5365 26d354b3cd2005836c25b4a5d09434ee 465 Gene3D G3DSA:3.40.50.720 47 189 9.7E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5365 26d354b3cd2005836c25b4a5d09434ee 465 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 92 172 4.1E-13 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB5365 26d354b3cd2005836c25b4a5d09434ee 465 SUPERFAMILY SSF55347 182 367 2.62E-14 T 11-11-2016 RB5365 26d354b3cd2005836c25b4a5d09434ee 465 SUPERFAMILY SSF51735 47 203 2.63E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5365 26d354b3cd2005836c25b4a5d09434ee 465 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 35 0.0016 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RB5365 26d354b3cd2005836c25b4a5d09434ee 465 Gene3D G3DSA:3.30.360.10 190 437 3.3E-17 T 11-11-2016 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 Gene3D G3DSA:3.30.1490.20 139 214 2.6E-23 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 22 120 7.7E-35 T 11-11-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 121 319 4.4E-76 T 11-11-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 21 448 4.3E-165 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 SUPERFAMILY SSF56059 122 342 9.49E-55 T 11-11-2016 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 313 320 - T 11-11-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 21 448 42.565 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 SMART SM01209 121 319 2.4E-121 T 11-11-2016 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 SUPERFAMILY SSF52440 21 121 2.16E-35 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB6616 d66fe8c1abe7d04e80f49539c960c417 454 Gene3D G3DSA:3.30.470.20 215 345 1.0E-57 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 Gene3D G3DSA:3.40.50.20 22 113 8.1E-38 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB6616 d66fe8c1abe7d04e80f49539c960c417 454 SUPERFAMILY SSF51246 353 448 2.2E-28 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 SMART SM01210 354 448 1.1E-47 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 Gene3D G3DSA:3.90.600.10 355 447 4.6E-35 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB6616 d66fe8c1abe7d04e80f49539c960c417 454 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 355 445 1.0E-28 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RB6732 a519819a68c57c9cfeeb658fa466a422 1178 Gene3D G3DSA:2.120.10.60 886 1001 1.3E-14 T 11-11-2016 RB6732 a519819a68c57c9cfeeb658fa466a422 1178 Pfam PF07622 Protein of unknown function (DUF1583) 509 902 2.8E-171 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB6732 a519819a68c57c9cfeeb658fa466a422 1178 Pfam PF07676 WD40-like Beta Propeller Repeat 918 931 0.13 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB6732 a519819a68c57c9cfeeb658fa466a422 1178 Pfam PF07676 WD40-like Beta Propeller Repeat 960 975 0.0063 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB6732 a519819a68c57c9cfeeb658fa466a422 1178 SUPERFAMILY SSF82171 882 1156 2.63E-26 T 11-11-2016 RB6732 a519819a68c57c9cfeeb658fa466a422 1178 Gene3D G3DSA:2.120.10.30 1002 1164 3.9E-17 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB6732 a519819a68c57c9cfeeb658fa466a422 1178 Pfam PF07619 Protein of unknown function (DUF1581) 405 488 1.1E-34 T 11-11-2016 IPR022660 Domain of unknown function DUF1581 RB3193 78ed42c81167bb3f6c1a6ff037a8d5de 378 SUPERFAMILY SSF51569 26 370 1.04E-56 T 11-11-2016 RB3193 78ed42c81167bb3f6c1a6ff037a8d5de 378 Gene3D G3DSA:3.20.20.70 23 367 1.3E-73 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB3193 78ed42c81167bb3f6c1a6ff037a8d5de 378 Pfam PF00923 Transaldolase 36 365 2.8E-51 T 11-11-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 RB3193 78ed42c81167bb3f6c1a6ff037a8d5de 378 Hamap MF_00493 Transaldolase [tal]. 1 377 39.338 T 11-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RB3193 78ed42c81167bb3f6c1a6ff037a8d5de 378 PIRSF PIRSF036915 16 378 7.5E-51 T 11-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RB5695 38bdf72340ca50624288a80a30e649f5 288 Gene3D G3DSA:3.60.110.10 4 284 1.1E-94 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5695 38bdf72340ca50624288a80a30e649f5 288 Pfam PF00795 Carbon-nitrogen hydrolase 9 265 3.9E-56 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5695 38bdf72340ca50624288a80a30e649f5 288 SUPERFAMILY SSF56317 4 285 7.85E-85 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB10209 6303358f93b7da2515a528568c07e1ea 110 ProSitePatterns PS00605 ATP synthase c subunit signature. 74 95 - T 11-11-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 RB10209 6303358f93b7da2515a528568c07e1ea 110 SUPERFAMILY SSF81333 40 108 3.4E-14 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RB10209 6303358f93b7da2515a528568c07e1ea 110 Pfam PF00137 ATP synthase subunit C 45 107 6.6E-8 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RB10209 6303358f93b7da2515a528568c07e1ea 110 Hamap MF_01396 ATP synthase subunit c [atpH]. 43 109 12.476 T 11-11-2016 RB10209 6303358f93b7da2515a528568c07e1ea 110 PRINTS PR00124 ATP synthase C subunit signature 67 82 4.0E-7 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RB10209 6303358f93b7da2515a528568c07e1ea 110 PRINTS PR00124 ATP synthase C subunit signature 46 65 4.0E-7 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RB10209 6303358f93b7da2515a528568c07e1ea 110 PRINTS PR00124 ATP synthase C subunit signature 84 109 4.0E-7 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RB10209 6303358f93b7da2515a528568c07e1ea 110 Gene3D G3DSA:1.20.20.10 45 107 1.4E-17 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RB10209 6303358f93b7da2515a528568c07e1ea 110 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 56 107 3.9E-12 T 11-11-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 SUPERFAMILY SSF52374 13 336 7.31E-102 T 11-11-2016 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 Gene3D G3DSA:1.10.240.10 246 329 9.0E-39 T 11-11-2016 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 Pfam PF00579 tRNA synthetases class I (W and Y) 42 336 6.0E-79 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 14 436 7.5E-121 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 Gene3D G3DSA:3.40.50.620 4 245 1.9E-102 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 14 436 44.499 T 11-11-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 Pfam PF01479 S4 domain 375 415 2.1E-5 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 SUPERFAMILY SSF55174 335 436 2.36E-17 T 11-11-2016 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 175 190 2.7E-28 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 196 218 2.7E-28 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 229 241 2.7E-28 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 56 78 2.7E-28 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RB9134 4c9bcbbdff66298ec3d7228b19a745ad 438 Gene3D G3DSA:3.10.290.10 330 436 5.8E-29 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB772 4318a72dba72720c2842e8402306c0c9 490 SUPERFAMILY SSF53649 22 452 2.47E-124 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB772 4318a72dba72720c2842e8402306c0c9 490 ProSitePatterns PS00523 Sulfatases signature 1. 68 80 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB772 4318a72dba72720c2842e8402306c0c9 490 Pfam PF00884 Sulfatase 23 334 4.6E-75 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB772 4318a72dba72720c2842e8402306c0c9 490 Pfam PF14707 C-terminal region of aryl-sulfatase 360 452 1.6E-8 T 11-11-2016 RB772 4318a72dba72720c2842e8402306c0c9 490 Gene3D G3DSA:3.40.720.10 21 348 6.0E-107 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB772 4318a72dba72720c2842e8402306c0c9 490 Gene3D G3DSA:3.30.1120.10 349 447 2.1E-11 T 11-11-2016 RB8402 9ad5b35a47acf496379466cbad5c5b44 764 Pfam PF00773 RNB domain 271 596 3.8E-103 T 11-11-2016 RB8402 9ad5b35a47acf496379466cbad5c5b44 764 SMART SM00955 271 597 1.7E-133 T 11-11-2016 RB8402 9ad5b35a47acf496379466cbad5c5b44 764 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 73 724 4.1E-137 T 11-11-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RB8402 9ad5b35a47acf496379466cbad5c5b44 764 SUPERFAMILY SSF50249 641 723 3.51E-12 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8402 9ad5b35a47acf496379466cbad5c5b44 764 SUPERFAMILY SSF50249 137 247 4.16E-6 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8402 9ad5b35a47acf496379466cbad5c5b44 764 Pfam PF08206 Ribonuclease B OB domain 86 143 6.8E-7 T 11-11-2016 IPR013223 Ribonuclease B, N-terminal OB domain RB8402 9ad5b35a47acf496379466cbad5c5b44 764 SUPERFAMILY SSF50249 231 640 5.54E-120 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8402 9ad5b35a47acf496379466cbad5c5b44 764 Gene3D G3DSA:2.40.50.140 643 723 3.0E-9 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8402 9ad5b35a47acf496379466cbad5c5b44 764 SUPERFAMILY SSF50249 73 146 4.28E-9 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8402 9ad5b35a47acf496379466cbad5c5b44 764 Hamap MF_01895 Ribonuclease R [rnr]. 25 724 45.745 T 11-11-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RB8402 9ad5b35a47acf496379466cbad5c5b44 764 Pfam PF00575 S1 RNA binding domain 640 721 1.0E-6 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB724 80f01ee0a2473a002ebd271c554a36c5 468 SUPERFAMILY SSF53649 29 452 2.38E-93 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB724 80f01ee0a2473a002ebd271c554a36c5 468 Gene3D G3DSA:3.40.720.10 153 338 4.2E-37 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB724 80f01ee0a2473a002ebd271c554a36c5 468 ProSitePatterns PS00523 Sulfatases signature 1. 77 89 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB724 80f01ee0a2473a002ebd271c554a36c5 468 Gene3D G3DSA:3.30.1120.10 339 358 8.3E-20 T 11-11-2016 RB724 80f01ee0a2473a002ebd271c554a36c5 468 Gene3D G3DSA:3.30.1120.10 399 444 8.3E-20 T 11-11-2016 RB724 80f01ee0a2473a002ebd271c554a36c5 468 Pfam PF00884 Sulfatase 31 295 2.8E-38 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB724 80f01ee0a2473a002ebd271c554a36c5 468 Gene3D G3DSA:3.40.720.10 30 133 9.8E-33 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 Gene3D G3DSA:3.30.70.141 1 140 1.0E-54 T 11-11-2016 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 6.3E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 6.3E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 6.3E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 6.3E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 6.3E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 Pfam PF00334 Nucleoside diphosphate kinase 2 135 6.4E-52 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 SMART SM00562 1 138 3.9E-73 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 SUPERFAMILY SSF54919 1 143 1.31E-54 T 11-11-2016 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 11-11-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB11832 f789cefb9b1cc69ea1d376f514d16c17 152 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 32.888 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB4877 765d3dc74b00b5d5448fc0e1425112cf 394 Gene3D G3DSA:3.30.930.10 73 391 4.4E-60 T 11-11-2016 RB4877 765d3dc74b00b5d5448fc0e1425112cf 394 Pfam PF00152 tRNA synthetases class II (D, K and N) 74 392 6.1E-36 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB4877 765d3dc74b00b5d5448fc0e1425112cf 394 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 81 388 1.6E-99 T 11-11-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 RB4877 765d3dc74b00b5d5448fc0e1425112cf 394 SUPERFAMILY SSF55681 76 393 1.1E-67 T 11-11-2016 RB560 eec123a2e83218b979476304f88951c8 280 Gene3D G3DSA:3.30.70.1060 163 272 2.5E-32 T 11-11-2016 RB560 eec123a2e83218b979476304f88951c8 280 Gene3D G3DSA:3.30.70.1060 28 138 1.9E-38 T 11-11-2016 RB560 eec123a2e83218b979476304f88951c8 280 Pfam PF03795 YCII-related domain 164 272 5.4E-17 T 11-11-2016 IPR005545 YCII-related RB560 eec123a2e83218b979476304f88951c8 280 Pfam PF03795 YCII-related domain 28 138 1.0E-21 T 11-11-2016 IPR005545 YCII-related RB560 eec123a2e83218b979476304f88951c8 280 SUPERFAMILY SSF54909 24 139 3.58E-34 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB560 eec123a2e83218b979476304f88951c8 280 SUPERFAMILY SSF54909 164 273 1.2E-28 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB7503 8108291900a634a4105a9182483895ff 900 Pfam PF13768 von Willebrand factor type A domain 79 135 0.15 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 Pfam PF13768 von Willebrand factor type A domain 185 224 0.11 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 SMART SM00327 462 633 3.5E-27 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 SUPERFAMILY SSF53300 464 629 1.53E-34 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 Gene3D G3DSA:3.40.50.410 463 626 2.0E-26 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 Gene3D G3DSA:3.40.50.410 179 238 3.9E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 Gene3D G3DSA:3.40.50.410 79 136 3.9E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 Gene3D G3DSA:3.40.50.880 639 734 9.1E-72 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB7503 8108291900a634a4105a9182483895ff 900 Gene3D G3DSA:3.40.50.880 321 462 9.1E-72 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB7503 8108291900a634a4105a9182483895ff 900 SUPERFAMILY SSF53300 189 250 7.55E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 SUPERFAMILY SSF53300 79 124 7.55E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 Pfam PF00092 von Willebrand factor type A domain 465 626 3.0E-22 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7503 8108291900a634a4105a9182483895ff 900 SUPERFAMILY SSF52317 330 458 4.35E-52 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB7503 8108291900a634a4105a9182483895ff 900 SUPERFAMILY SSF52317 635 733 4.35E-52 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB7503 8108291900a634a4105a9182483895ff 900 Pfam PF07090 Putative glutamine amidotransferase 651 729 3.2E-8 T 11-11-2016 IPR010768 Putative glutamine amidotransferase RB12500 783aa65ba2fc1cc96407b10b88f5b2a5 467 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 26 445 1.1E-162 T 11-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB12500 783aa65ba2fc1cc96407b10b88f5b2a5 467 SUPERFAMILY SSF52540 104 372 6.77E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12500 783aa65ba2fc1cc96407b10b88f5b2a5 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB12500 783aa65ba2fc1cc96407b10b88f5b2a5 467 Gene3D G3DSA:3.40.50.300 104 368 1.9E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12500 783aa65ba2fc1cc96407b10b88f5b2a5 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 366 3.0E-73 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB12500 783aa65ba2fc1cc96407b10b88f5b2a5 467 SMART SM00382 169 350 4.6E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7798 056caf46a5e211f213a66e74a9a49fae 937 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 232 244 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB7798 056caf46a5e211f213a66e74a9a49fae 937 Pfam PF00069 Protein kinase domain 113 371 3.9E-40 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB7798 056caf46a5e211f213a66e74a9a49fae 937 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 119 142 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB7798 056caf46a5e211f213a66e74a9a49fae 937 SUPERFAMILY SSF56112 110 381 3.78E-63 T 11-11-2016 IPR011009 Protein kinase-like domain RB7798 056caf46a5e211f213a66e74a9a49fae 937 Gene3D G3DSA:3.30.200.20 110 178 3.8E-20 T 11-11-2016 RB7798 056caf46a5e211f213a66e74a9a49fae 937 SMART SM00220 113 383 1.5E-46 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB7798 056caf46a5e211f213a66e74a9a49fae 937 Gene3D G3DSA:1.10.510.10 179 377 1.6E-39 T 11-11-2016 RB11003 b2c7b790712f29df3822ba4b886c4169 649 Pfam PF08757 CotH protein 226 446 1.7E-32 T 11-11-2016 IPR014867 Spore coat protein CotH RB12388 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12388 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12388 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB2186 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB2186 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB2186 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB6636 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6636 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6636 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB6012 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6012 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6012 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB13189 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB13189 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB13189 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB8384 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB8384 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB8384 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB6736 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6736 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6736 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB12239 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12239 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12239 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB9907 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 41 227 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB9907 011f01a640ff7ce9d2e0f983898b1192 433 SUPERFAMILY SSF53098 260 406 3.72E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB9907 011f01a640ff7ce9d2e0f983898b1192 433 Pfam PF13546 DDE superfamily endonuclease 27 299 1.3E-75 T 11-11-2016 RB9026 45d9d868f5a75b9cb64dbc23997d79cd 473 Gene3D G3DSA:3.40.50.720 65 208 3.7E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9026 45d9d868f5a75b9cb64dbc23997d79cd 473 Gene3D G3DSA:3.30.360.10 209 444 7.2E-25 T 11-11-2016 RB9026 45d9d868f5a75b9cb64dbc23997d79cd 473 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 71 192 4.4E-18 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB9026 45d9d868f5a75b9cb64dbc23997d79cd 473 SUPERFAMILY SSF51735 61 221 5.21E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9026 45d9d868f5a75b9cb64dbc23997d79cd 473 SUPERFAMILY SSF55347 198 227 1.37E-19 T 11-11-2016 RB9026 45d9d868f5a75b9cb64dbc23997d79cd 473 SUPERFAMILY SSF55347 265 363 1.37E-19 T 11-11-2016 RB1958 c212287d7c66257d02bfdf6e27881f3f 632 Pfam PF03136 Pup-ligase protein 27 606 5.7E-116 T 11-11-2016 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 RB11811 6ec86477564e9255ff795fc37b0744ed 377 SUPERFAMILY SSF56436 86 358 4.47E-64 T 11-11-2016 IPR016187 C-type lectin fold RB11811 6ec86477564e9255ff795fc37b0744ed 377 Gene3D G3DSA:3.90.1580.10 77 366 4.7E-68 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB11811 6ec86477564e9255ff795fc37b0744ed 377 Pfam PF03781 Sulfatase-modifying factor enzyme 1 88 332 3.4E-48 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB6246 0be12a194a24e5d3db3b90efe8019c9d 383 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 23 381 2.0E-142 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 RB6246 0be12a194a24e5d3db3b90efe8019c9d 383 Gene3D G3DSA:3.40.640.10 36 277 9.1E-93 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB6246 0be12a194a24e5d3db3b90efe8019c9d 383 Pfam PF00266 Aminotransferase class-V 23 371 1.3E-45 T 11-11-2016 IPR000192 Aminotransferase class V domain RB6246 0be12a194a24e5d3db3b90efe8019c9d 383 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 208 227 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RB6246 0be12a194a24e5d3db3b90efe8019c9d 383 SUPERFAMILY SSF53383 21 380 6.03E-107 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB6246 0be12a194a24e5d3db3b90efe8019c9d 383 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 21 382 47.952 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 RB6246 0be12a194a24e5d3db3b90efe8019c9d 383 PIRSF PIRSF000525 17 383 2.2E-155 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 RB6246 0be12a194a24e5d3db3b90efe8019c9d 383 Gene3D G3DSA:3.90.1150.10 280 382 2.0E-41 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB5380 9adc0e8cc2529a6aa186346fdc216cd3 473 SUPERFAMILY SSF50998 86 428 2.49E-59 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB5380 9adc0e8cc2529a6aa186346fdc216cd3 473 SMART SM00564 400 431 590.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5380 9adc0e8cc2529a6aa186346fdc216cd3 473 SMART SM00564 186 219 69.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5380 9adc0e8cc2529a6aa186346fdc216cd3 473 SMART SM00564 127 163 96.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5380 9adc0e8cc2529a6aa186346fdc216cd3 473 SMART SM00564 281 311 660.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5380 9adc0e8cc2529a6aa186346fdc216cd3 473 SMART SM00564 232 267 0.011 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5380 9adc0e8cc2529a6aa186346fdc216cd3 473 Gene3D G3DSA:2.140.10.10 44 457 4.0E-59 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB5380 9adc0e8cc2529a6aa186346fdc216cd3 473 Pfam PF13360 PQQ-like domain 148 390 9.0E-23 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB5200 027f6ccd840eabb254721e8e575731c2 942 Pfam PF00128 Alpha amylase, catalytic domain 453 538 1.1E-12 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB5200 027f6ccd840eabb254721e8e575731c2 942 SUPERFAMILY SSF56784 22 265 1.3E-27 T 11-11-2016 IPR023214 HAD-like domain RB5200 027f6ccd840eabb254721e8e575731c2 942 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 22 283 5.1E-79 T 11-11-2016 IPR006380 Sucrose-phosphatase, N-terminal RB5200 027f6ccd840eabb254721e8e575731c2 942 SUPERFAMILY SSF81296 310 415 8.12E-14 T 11-11-2016 IPR014756 Immunoglobulin E-set RB5200 027f6ccd840eabb254721e8e575731c2 942 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 25 238 9.2E-18 T 11-11-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RB5200 027f6ccd840eabb254721e8e575731c2 942 SMART SM00642 420 788 4.8E-10 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB5200 027f6ccd840eabb254721e8e575731c2 942 Gene3D G3DSA:3.90.1070.10 129 192 4.4E-9 T 11-11-2016 RB5200 027f6ccd840eabb254721e8e575731c2 942 Gene3D G3DSA:3.20.20.80 427 837 1.5E-73 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB5200 027f6ccd840eabb254721e8e575731c2 942 SUPERFAMILY SSF51445 426 837 1.21E-86 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB5200 027f6ccd840eabb254721e8e575731c2 942 Gene3D G3DSA:3.40.50.1000 193 260 7.6E-28 T 11-11-2016 IPR023214 HAD-like domain RB5200 027f6ccd840eabb254721e8e575731c2 942 Gene3D G3DSA:3.40.50.1000 22 104 7.6E-28 T 11-11-2016 IPR023214 HAD-like domain RB5200 027f6ccd840eabb254721e8e575731c2 942 Gene3D G3DSA:2.60.40.10 311 414 1.1E-22 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 Pfam PF07670 Nucleoside recognition 479 642 8.6E-31 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 Pfam PF07670 Nucleoside recognition 317 404 2.4E-11 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 Pfam PF07664 Ferrous iron transport protein B C terminus 424 474 1.4E-17 T 11-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 47 65 1.6E-7 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 75 90 1.6E-7 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 46 1.6E-7 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 SUPERFAMILY SSF52540 26 189 3.61E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 Gene3D G3DSA:3.40.50.300 24 191 1.7E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7130 d6d039ffcd2f637b568fe0d7b2002637 671 Pfam PF02421 Ferrous iron transport protein B 25 182 1.0E-48 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 RB6435 34d9229df458b8c7fd7f3314d28a18c7 125 Gene3D G3DSA:3.90.470.20 1 123 9.0E-32 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RB6435 34d9229df458b8c7fd7f3314d28a18c7 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 6 118 2.2E-20 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RB6435 34d9229df458b8c7fd7f3314d28a18c7 125 SUPERFAMILY SSF56214 3 123 3.4E-23 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RB6435 34d9229df458b8c7fd7f3314d28a18c7 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 125 18.377 T 11-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RB6435 34d9229df458b8c7fd7f3314d28a18c7 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 123 3.5E-22 T 11-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RB6435 34d9229df458b8c7fd7f3314d28a18c7 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 88 1.0E-11 T 11-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RB6435 34d9229df458b8c7fd7f3314d28a18c7 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 123 1.3E-20 T 11-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RB9869 8b1f48d217f227dc7649fea75c965ae7 334 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 1.8E-127 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RB9869 8b1f48d217f227dc7649fea75c965ae7 334 SUPERFAMILY SSF51735 4 184 3.43E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9869 8b1f48d217f227dc7649fea75c965ae7 334 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 3.6E-65 T 11-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RB9869 8b1f48d217f227dc7649fea75c965ae7 334 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 3.5E-71 T 11-11-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RB9869 8b1f48d217f227dc7649fea75c965ae7 334 SUPERFAMILY SSF48179 185 331 2.21E-68 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB9869 8b1f48d217f227dc7649fea75c965ae7 334 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 330 42.97 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RB9869 8b1f48d217f227dc7649fea75c965ae7 334 Gene3D G3DSA:1.10.1040.10 43 326 4.3E-105 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RB9869 8b1f48d217f227dc7649fea75c965ae7 334 Gene3D G3DSA:3.50.50.60 6 42 1.7E-4 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10690 16103d1224495c56608cb73318ac116a 429 Gene3D G3DSA:3.30.1360.110 273 336 9.5E-6 T 11-11-2016 IPR023116 Phosphonoacetate hydrolase, insert domain GO:0047400 RB10690 16103d1224495c56608cb73318ac116a 429 SUPERFAMILY SSF53649 3 356 5.42E-55 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10690 16103d1224495c56608cb73318ac116a 429 Gene3D G3DSA:3.40.720.10 3 272 2.0E-26 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB10690 16103d1224495c56608cb73318ac116a 429 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 4 350 4.9E-46 T 11-11-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 RB3908 b30eb3a95f0de7e20477ebbd8c91dbe1 149 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 16 144 6.3E-42 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB3908 b30eb3a95f0de7e20477ebbd8c91dbe1 149 SUPERFAMILY SSF111038 8 144 6.02E-50 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB3908 b30eb3a95f0de7e20477ebbd8c91dbe1 149 Gene3D G3DSA:2.60.120.460 6 145 7.7E-58 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB3908 b30eb3a95f0de7e20477ebbd8c91dbe1 149 Pfam PF01894 Uncharacterised protein family UPF0047 26 141 2.8E-40 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB3908 b30eb3a95f0de7e20477ebbd8c91dbe1 149 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 106 124 - T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB3908 b30eb3a95f0de7e20477ebbd8c91dbe1 149 PIRSF PIRSF004681 6 145 7.3E-46 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB2931 03c85b490ee68922b9fd6006b6b1ee6e 200 SUPERFAMILY SSF55729 26 172 2.32E-37 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB2931 03c85b490ee68922b9fd6006b6b1ee6e 200 Pfam PF13302 Acetyltransferase (GNAT) domain 29 167 2.1E-31 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB2931 03c85b490ee68922b9fd6006b6b1ee6e 200 Gene3D G3DSA:3.40.630.30 25 173 1.0E-47 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB8476 7c6fe5db11158031e233be354b239b76 93 Gene3D G3DSA:3.10.50.40 4 91 4.2E-33 T 11-11-2016 RB8476 7c6fe5db11158031e233be354b239b76 93 SUPERFAMILY SSF54534 5 92 9.81E-28 T 11-11-2016 RB8476 7c6fe5db11158031e233be354b239b76 93 Pfam PF13616 PPIC-type PPIASE domain 5 91 5.5E-22 T 11-11-2016 RB4931 aa3f3a5566c6b540ae643fe0d21a1a3d 217 Pfam PF03938 Outer membrane protein (OmpH-like) 26 200 6.9E-21 T 11-11-2016 IPR005632 Chaperone protein Skp GO:0051082 RB4931 aa3f3a5566c6b540ae643fe0d21a1a3d 217 SMART SM00935 30 202 1.6E-20 T 11-11-2016 IPR005632 Chaperone protein Skp GO:0051082 RB4931 aa3f3a5566c6b540ae643fe0d21a1a3d 217 SUPERFAMILY SSF111384 44 201 1.44E-11 T 11-11-2016 IPR024930 Skp domain RB4931 aa3f3a5566c6b540ae643fe0d21a1a3d 217 Gene3D G3DSA:3.30.910.20 116 200 4.6E-10 T 11-11-2016 RB4931 aa3f3a5566c6b540ae643fe0d21a1a3d 217 Gene3D G3DSA:3.30.910.20 36 80 4.6E-10 T 11-11-2016 RB9288 dfcef6237e2a7cf84c4a2c843588fd33 319 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5 284 2.7E-91 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 RB9288 dfcef6237e2a7cf84c4a2c843588fd33 319 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 4 286 35.595 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 RB9288 dfcef6237e2a7cf84c4a2c843588fd33 319 Pfam PF02401 LytB protein 6 282 3.5E-84 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PIRSF PIRSF000724 1 397 1.2E-133 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-11-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 396 39.58 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 Gene3D G3DSA:3.40.50.1270 184 384 1.1E-78 T 11-11-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 372 389 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 172 194 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 195 214 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 349 360 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 1.6E-84 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 Pfam PF00162 Phosphoglycerate kinase 6 385 9.7E-149 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 Gene3D G3DSA:3.40.50.1260 3 183 2.5E-66 T 11-11-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10500 e420ee9682de3f861a2cbe74294470d8 397 SUPERFAMILY SSF53748 1 396 8.01E-141 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB10184 6d38fdd896e4159deea572a76d35fd31 93 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 13 72 1.4E-5 T 11-11-2016 IPR022789 Antitoxin ParD RB9477 ca481237175ca20f55185b2742620840 366 SUPERFAMILY SSF52540 35 256 7.17E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9477 ca481237175ca20f55185b2742620840 366 SMART SM00382 59 244 1.0E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9477 ca481237175ca20f55185b2742620840 366 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB9477 ca481237175ca20f55185b2742620840 366 Gene3D G3DSA:3.40.50.300 33 263 1.4E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9477 ca481237175ca20f55185b2742620840 366 Pfam PF00005 ABC transporter 51 193 5.4E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB12551 3c30d7a2ff9ce044dc0d5a4472949481 396 Pfam PF00487 Fatty acid desaturase 130 366 1.6E-19 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RB12551 3c30d7a2ff9ce044dc0d5a4472949481 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 107 127 1.5E-10 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB12551 3c30d7a2ff9ce044dc0d5a4472949481 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 191 220 1.5E-10 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB12551 3c30d7a2ff9ce044dc0d5a4472949481 396 PRINTS PR00075 Fatty acid desaturase family 1 signature 154 174 1.5E-10 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB9235 9400878bc5d1bddbdbd2931281904b0b 265 Pfam PF05050 Methyltransferase FkbM domain 64 221 3.6E-21 T 11-11-2016 IPR006342 Methyltransferase FkbM RB9235 9400878bc5d1bddbdbd2931281904b0b 265 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 61 199 6.7E-23 T 11-11-2016 IPR006342 Methyltransferase FkbM RB9235 9400878bc5d1bddbdbd2931281904b0b 265 Gene3D G3DSA:3.40.50.150 46 233 6.9E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9235 9400878bc5d1bddbdbd2931281904b0b 265 SUPERFAMILY SSF53335 58 245 6.64E-33 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6781 8d025150240d68ee52defef11ec45fe0 477 Pfam PF00884 Sulfatase 30 372 6.8E-57 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB6781 8d025150240d68ee52defef11ec45fe0 477 SUPERFAMILY SSF53649 28 466 1.23E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6781 8d025150240d68ee52defef11ec45fe0 477 Pfam PF16347 Domain of unknown function (DUF4976) 406 465 7.2E-9 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB6781 8d025150240d68ee52defef11ec45fe0 477 Gene3D G3DSA:3.30.1120.10 402 468 2.5E-14 T 11-11-2016 RB6781 8d025150240d68ee52defef11ec45fe0 477 Gene3D G3DSA:3.40.720.10 27 390 4.2E-88 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8635 b8df126998a9d3841bec2d9df39eeca2 421 Pfam PF00149 Calcineurin-like phosphoesterase 199 357 6.1E-11 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB8635 b8df126998a9d3841bec2d9df39eeca2 421 SUPERFAMILY SSF56300 199 411 9.96E-26 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8635 b8df126998a9d3841bec2d9df39eeca2 421 Gene3D G3DSA:3.60.21.10 198 372 6.1E-18 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5503 aa7399bbf4aff80e6d7415c26b8b0398 137 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 113 1.9E-23 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 RB5503 aa7399bbf4aff80e6d7415c26b8b0398 137 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 115 18.453 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 RB5503 aa7399bbf4aff80e6d7415c26b8b0398 137 Pfam PF02033 Ribosome-binding factor A 6 108 8.6E-24 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 RB5503 aa7399bbf4aff80e6d7415c26b8b0398 137 SUPERFAMILY SSF89919 2 111 2.88E-28 T 11-11-2016 IPR023799 Ribosome-binding factor A domain RB5503 aa7399bbf4aff80e6d7415c26b8b0398 137 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 95 9.0E-44 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 RB5503 aa7399bbf4aff80e6d7415c26b8b0398 137 Gene3D G3DSA:3.30.300.20 3 116 3.7E-31 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta RB7813 8f4e1ac0621e51b60a93c041b661a34c 307 Pfam PF01904 Protein of unknown function DUF72 39 278 1.0E-51 T 11-11-2016 IPR002763 Protein of unknown function DUF72 RB7813 8f4e1ac0621e51b60a93c041b661a34c 307 SUPERFAMILY SSF117396 22 282 4.97E-64 T 11-11-2016 IPR002763 Protein of unknown function DUF72 RB7813 8f4e1ac0621e51b60a93c041b661a34c 307 Gene3D G3DSA:3.20.20.410 20 287 1.3E-63 T 11-11-2016 IPR002763 Protein of unknown function DUF72 RB2630 e0cee177595230654ada4ea5b935806d 415 Hamap MF_01454 GTPase Obg [obg]. 9 342 44.922 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 SUPERFAMILY SSF82051 9 164 9.94E-49 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 235 253 1.6E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 218 233 1.6E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 169 189 1.6E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 190 208 1.6E-33 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 PIRSF PIRSF002401 7 388 7.9E-132 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 10 340 8.5E-129 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 Gene3D G3DSA:2.70.210.12 9 163 3.7E-52 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 Pfam PF01926 50S ribosome-binding GTPase 168 291 1.2E-22 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 Gene3D G3DSA:3.40.50.300 167 346 7.1E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2630 e0cee177595230654ada4ea5b935806d 415 Pfam PF01018 GTP1/OBG 10 164 4.2E-53 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 ProSitePatterns PS00905 GTP1/OBG family signature. 220 233 - T 11-11-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 RB2630 e0cee177595230654ada4ea5b935806d 415 SUPERFAMILY SSF52540 159 345 1.26E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8541 c164c174d6f21ac4d7df6a5a79b936d5 357 Gene3D G3DSA:2.40.30.40 74 161 2.6E-29 T 11-11-2016 IPR023367 Peptidase M42, domain 2 RB8541 c164c174d6f21ac4d7df6a5a79b936d5 357 SUPERFAMILY SSF101821 72 179 1.1E-23 T 11-11-2016 RB8541 c164c174d6f21ac4d7df6a5a79b936d5 357 Gene3D G3DSA:3.40.630.10 4 73 4.7E-69 T 11-11-2016 RB8541 c164c174d6f21ac4d7df6a5a79b936d5 357 Gene3D G3DSA:3.40.630.10 168 350 4.7E-69 T 11-11-2016 RB8541 c164c174d6f21ac4d7df6a5a79b936d5 357 Pfam PF05343 M42 glutamyl aminopeptidase 48 340 1.9E-77 T 11-11-2016 IPR008007 Peptidase M42 RB8541 c164c174d6f21ac4d7df6a5a79b936d5 357 SUPERFAMILY SSF53187 6 84 1.13E-61 T 11-11-2016 RB8541 c164c174d6f21ac4d7df6a5a79b936d5 357 SUPERFAMILY SSF53187 174 348 1.13E-61 T 11-11-2016 RB8541 c164c174d6f21ac4d7df6a5a79b936d5 357 PIRSF PIRSF001123 4 353 1.1E-90 T 11-11-2016 IPR008007 Peptidase M42 RB1753 b190349561ffdc56e52ee8c941e7ada1 153 Pfam PF00210 Ferritin-like domain 7 137 1.2E-24 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RB1753 b190349561ffdc56e52ee8c941e7ada1 153 Gene3D G3DSA:1.20.1260.10 3 136 1.2E-30 T 11-11-2016 IPR012347 Ferritin-related RB1753 b190349561ffdc56e52ee8c941e7ada1 153 SUPERFAMILY SSF47240 2 136 4.06E-26 T 11-11-2016 IPR009078 Ferritin-like superfamily RB1893 987ae279f328587fa08685939a10dc15 1090 Gene3D G3DSA:3.30.200.20 25 191 1.0E-27 T 11-11-2016 RB1893 987ae279f328587fa08685939a10dc15 1090 Gene3D G3DSA:2.130.10.10 473 638 1.2E-22 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SUPERFAMILY SSF50998 478 791 3.37E-38 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB1893 987ae279f328587fa08685939a10dc15 1090 Pfam PF00400 WD domain, G-beta repeat 755 789 0.2 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 Pfam PF00400 WD domain, G-beta repeat 713 738 0.24 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 Pfam PF00400 WD domain, G-beta repeat 1007 1044 0.0028 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SMART SM00220 49 342 5.0E-36 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1893 987ae279f328587fa08685939a10dc15 1090 SUPERFAMILY SSF50978 684 793 7.32E-30 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SUPERFAMILY SSF50978 839 897 7.32E-30 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SUPERFAMILY SSF50978 962 1079 7.32E-30 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SMART SM00320 482 521 0.076 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SMART SM00320 964 1002 330.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SMART SM00320 843 879 67.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SMART SM00320 747 789 0.0096 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SMART SM00320 1005 1044 0.034 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SMART SM00320 699 738 0.054 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 SMART SM00320 569 608 0.075 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 776 790 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB1893 987ae279f328587fa08685939a10dc15 1090 Pfam PF00069 Protein kinase domain 49 331 4.3E-39 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1893 987ae279f328587fa08685939a10dc15 1090 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 199 211 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB1893 987ae279f328587fa08685939a10dc15 1090 Gene3D G3DSA:1.10.510.10 192 342 9.0E-37 T 11-11-2016 RB1893 987ae279f328587fa08685939a10dc15 1090 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1031 1045 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB1893 987ae279f328587fa08685939a10dc15 1090 Gene3D G3DSA:2.130.10.10 977 1080 3.1E-33 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 Gene3D G3DSA:2.130.10.10 855 915 3.1E-33 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 Gene3D G3DSA:2.130.10.10 669 820 3.1E-33 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1893 987ae279f328587fa08685939a10dc15 1090 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 55 78 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB1893 987ae279f328587fa08685939a10dc15 1090 SUPERFAMILY SSF56112 31 144 1.62E-62 T 11-11-2016 IPR011009 Protein kinase-like domain RB1893 987ae279f328587fa08685939a10dc15 1090 SUPERFAMILY SSF56112 174 376 1.62E-62 T 11-11-2016 IPR011009 Protein kinase-like domain RB479 97cc4d7b951f9ac41c90e12ad793d3ee 1101 Pfam PF07619 Protein of unknown function (DUF1581) 361 441 5.2E-32 T 11-11-2016 IPR022660 Domain of unknown function DUF1581 RB479 97cc4d7b951f9ac41c90e12ad793d3ee 1101 Pfam PF07622 Protein of unknown function (DUF1583) 862 1074 3.3E-14 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB479 97cc4d7b951f9ac41c90e12ad793d3ee 1101 Pfam PF07622 Protein of unknown function (DUF1583) 472 866 6.3E-171 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB1092 f26aff92b21826bfc96e6ad8d00bea15 396 Gene3D G3DSA:3.40.50.720 6 194 2.5E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1092 f26aff92b21826bfc96e6ad8d00bea15 396 SUPERFAMILY SSF48179 192 294 6.46E-21 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB1092 f26aff92b21826bfc96e6ad8d00bea15 396 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 190 214 - T 11-11-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RB1092 f26aff92b21826bfc96e6ad8d00bea15 396 Gene3D G3DSA:1.10.1040.10 195 287 2.0E-15 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RB1092 f26aff92b21826bfc96e6ad8d00bea15 396 SUPERFAMILY SSF51735 6 191 1.74E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1092 f26aff92b21826bfc96e6ad8d00bea15 396 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 193 286 9.4E-17 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RB1092 f26aff92b21826bfc96e6ad8d00bea15 396 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 190 3.5E-30 T 11-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 RB4803 fac32e7495c184b89ccac1868bb89f7e 1153 Pfam PF07583 Protein of unknown function (DUF1549) 201 405 2.9E-70 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB4803 fac32e7495c184b89ccac1868bb89f7e 1153 Pfam PF07635 Planctomycete cytochrome C 60 118 9.5E-15 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB4803 fac32e7495c184b89ccac1868bb89f7e 1153 Pfam PF07587 Protein of unknown function (DUF1553) 705 945 3.5E-88 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB6996 b19c156a1848e54b75e52856f30a82dd 685 Pfam PF00700 Bacterial flagellin C-terminal helical region 600 684 5.4E-19 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB6996 b19c156a1848e54b75e52856f30a82dd 685 SUPERFAMILY SSF64518 1 335 8.11E-45 T 11-11-2016 RB6996 b19c156a1848e54b75e52856f30a82dd 685 SUPERFAMILY SSF64518 321 684 8.37E-24 T 11-11-2016 RB6996 b19c156a1848e54b75e52856f30a82dd 685 Gene3D G3DSA:1.20.1330.10 499 500 1.1E-16 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB6996 b19c156a1848e54b75e52856f30a82dd 685 Gene3D G3DSA:1.20.1330.10 586 641 1.1E-16 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB6996 b19c156a1848e54b75e52856f30a82dd 685 Gene3D G3DSA:1.20.1330.10 53 140 1.1E-16 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB6996 b19c156a1848e54b75e52856f30a82dd 685 Pfam PF07196 Flagellin hook IN motif 416 465 3.2E-9 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 RB6996 b19c156a1848e54b75e52856f30a82dd 685 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 1.0E-29 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB6996 b19c156a1848e54b75e52856f30a82dd 685 PRINTS PR00207 Flagellin signature 36 53 1.3E-11 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB6996 b19c156a1848e54b75e52856f30a82dd 685 PRINTS PR00207 Flagellin signature 111 134 1.3E-11 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB6996 b19c156a1848e54b75e52856f30a82dd 685 PRINTS PR00207 Flagellin signature 75 94 1.3E-11 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB12854 c5182cd7ee938bf3da2e1f405aca2505 335 SUPERFAMILY SSF53328 11 224 3.27E-49 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB12854 c5182cd7ee938bf3da2e1f405aca2505 335 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 10 327 28.734 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 RB12854 c5182cd7ee938bf3da2e1f405aca2505 335 Pfam PF00551 Formyl transferase 58 189 1.6E-30 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB12854 c5182cd7ee938bf3da2e1f405aca2505 335 Gene3D G3DSA:3.40.50.170 11 223 1.3E-53 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB12854 c5182cd7ee938bf3da2e1f405aca2505 335 Pfam PF02911 Formyl transferase, C-terminal domain 222 324 3.2E-21 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB12854 c5182cd7ee938bf3da2e1f405aca2505 335 SUPERFAMILY SSF50486 223 332 4.91E-21 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RB12854 c5182cd7ee938bf3da2e1f405aca2505 335 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 11 329 4.0E-60 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 RB12854 c5182cd7ee938bf3da2e1f405aca2505 335 Gene3D G3DSA:3.10.25.10 225 332 2.8E-23 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB14 e978155af9774c935d9efc01588828de 516 Gene3D G3DSA:3.20.20.80 207 510 1.9E-18 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB14 e978155af9774c935d9efc01588828de 516 SUPERFAMILY SSF51445 210 422 9.7E-23 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB14 e978155af9774c935d9efc01588828de 516 SUPERFAMILY SSF51445 452 508 9.7E-23 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB11742 9dba2b153647522774a23c578e8239ed 952 Pfam PF07635 Planctomycete cytochrome C 42 94 2.7E-14 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB11742 9dba2b153647522774a23c578e8239ed 952 SUPERFAMILY SSF46626 23 117 2.03E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11742 9dba2b153647522774a23c578e8239ed 952 Pfam PF07583 Protein of unknown function (DUF1549) 144 351 1.9E-77 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB11742 9dba2b153647522774a23c578e8239ed 952 Pfam PF07587 Protein of unknown function (DUF1553) 663 921 1.2E-89 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB11525 abeb317b957ad664292a12fbb26fec1a 341 SUPERFAMILY SSF53448 49 101 4.22E-5 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11525 abeb317b957ad664292a12fbb26fec1a 341 SUPERFAMILY SSF53448 130 220 4.22E-5 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11525 abeb317b957ad664292a12fbb26fec1a 341 Gene3D G3DSA:3.90.550.10 44 221 5.7E-4 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB146 fc2b4be047497c7f03be33220aad675d 295 SUPERFAMILY SSF111369 29 270 1.11E-21 T 11-11-2016 RB146 fc2b4be047497c7f03be33220aad675d 295 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 26 275 7.1E-39 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB146 fc2b4be047497c7f03be33220aad675d 295 Pfam PF13533 Biotin-lipoyl like 40 81 1.3E-6 T 11-11-2016 RB146 fc2b4be047497c7f03be33220aad675d 295 Gene3D G3DSA:2.40.50.100 160 191 6.2E-14 T 11-11-2016 RB146 fc2b4be047497c7f03be33220aad675d 295 Gene3D G3DSA:2.40.50.100 39 72 6.2E-14 T 11-11-2016 RB146 fc2b4be047497c7f03be33220aad675d 295 Pfam PF13437 HlyD family secretion protein 163 263 6.9E-18 T 11-11-2016 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 457 473 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 325 657 3.8E-119 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 SUPERFAMILY SSF69618 10 266 4.58E-46 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 322 657 4.0E-120 T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 338 347 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 322 659 45.541 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 Gene3D G3DSA:3.20.20.210 317 659 2.1E-133 T 11-11-2016 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 SUPERFAMILY SSF51726 322 660 1.28E-103 T 11-11-2016 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 Pfam PF02602 Uroporphyrinogen-III synthase HemD 23 265 5.3E-39 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 Gene3D G3DSA:3.40.50.10090 140 270 4.5E-25 T 11-11-2016 RB7803 bd7b3b60e2a6185f9f0cdd171df0349d 673 Gene3D G3DSA:3.40.50.10090 7 135 2.4E-19 T 11-11-2016 RB9795 1453a2fc00660974c2f3799ca72e4728 339 Gene3D G3DSA:3.30.360.10 141 313 1.3E-74 T 11-11-2016 RB9795 1453a2fc00660974c2f3799ca72e4728 339 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 331 33.325 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RB9795 1453a2fc00660974c2f3799ca72e4728 339 Gene3D G3DSA:3.40.50.720 5 140 2.2E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9795 1453a2fc00660974c2f3799ca72e4728 339 SUPERFAMILY SSF51735 5 155 1.74E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9795 1453a2fc00660974c2f3799ca72e4728 339 PIRSF PIRSF000148 4 335 2.5E-124 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RB9795 1453a2fc00660974c2f3799ca72e4728 339 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 137 317 4.7E-51 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RB9795 1453a2fc00660974c2f3799ca72e4728 339 SMART SM00859 4 119 1.8E-34 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RB9795 1453a2fc00660974c2f3799ca72e4728 339 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 117 8.5E-27 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RB9795 1453a2fc00660974c2f3799ca72e4728 339 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 332 2.1E-122 T 11-11-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RB9795 1453a2fc00660974c2f3799ca72e4728 339 SUPERFAMILY SSF55347 127 318 1.79E-70 T 11-11-2016 RB1048 6400bfb2cbf5ec86753eb47940025cf6 408 SUPERFAMILY SSF50156 303 372 6.79E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1048 6400bfb2cbf5ec86753eb47940025cf6 408 SMART SM00228 301 371 0.001 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1048 6400bfb2cbf5ec86753eb47940025cf6 408 Gene3D G3DSA:2.30.42.10 307 372 2.5E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6511 8cdec599ca6bdd554c7767ee5bd81586 1002 SUPERFAMILY SSF46626 24 130 5.48E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6511 8cdec599ca6bdd554c7767ee5bd81586 1002 SUPERFAMILY SSF49785 456 569 2.13E-5 T 11-11-2016 IPR008979 Galactose-binding domain-like RB6511 8cdec599ca6bdd554c7767ee5bd81586 1002 Pfam PF07635 Planctomycete cytochrome C 59 110 7.4E-9 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB6511 8cdec599ca6bdd554c7767ee5bd81586 1002 Gene3D G3DSA:1.10.760.10 25 129 6.8E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6511 8cdec599ca6bdd554c7767ee5bd81586 1002 Pfam PF07583 Protein of unknown function (DUF1549) 172 385 4.4E-82 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB6511 8cdec599ca6bdd554c7767ee5bd81586 1002 Gene3D G3DSA:2.60.120.260 461 569 4.6E-8 T 11-11-2016 IPR008979 Galactose-binding domain-like RB6511 8cdec599ca6bdd554c7767ee5bd81586 1002 Pfam PF07587 Protein of unknown function (DUF1553) 724 979 1.1E-88 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB4382 34f6204a1962b0d99155b755a092bdd3 555 SUPERFAMILY SSF51419 127 368 4.22E-40 T 11-11-2016 IPR029066 PLP-binding barrel RB4382 34f6204a1962b0d99155b755a092bdd3 555 Gene3D G3DSA:2.40.37.10 392 543 3.2E-34 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB4382 34f6204a1962b0d99155b755a092bdd3 555 SUPERFAMILY SSF50621 405 540 1.47E-11 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB4382 34f6204a1962b0d99155b755a092bdd3 555 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 131 368 6.9E-25 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RB4382 34f6204a1962b0d99155b755a092bdd3 555 Gene3D G3DSA:3.20.20.10 128 367 1.9E-43 T 11-11-2016 IPR029066 PLP-binding barrel RB4382 34f6204a1962b0d99155b755a092bdd3 555 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 308 323 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RB1348 09d498f8b6e5ffb57aeaa3810658f722 233 Pfam PF09365 Conserved hypothetical protein (DUF2461) 9 224 9.8E-59 T 11-11-2016 IPR012808 Conserved hypothetical protein CHP02453 RB1348 09d498f8b6e5ffb57aeaa3810658f722 233 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 6 230 1.0E-86 T 11-11-2016 IPR012808 Conserved hypothetical protein CHP02453 RB1348 09d498f8b6e5ffb57aeaa3810658f722 233 PIRSF PIRSF028451 1 233 3.9E-93 T 11-11-2016 IPR015996 Uncharacterised conserved protein UCP028451 RB12963 0bee19447a58b02865b792baa3993f57 371 SUPERFAMILY SSF102114 119 345 4.45E-16 T 11-11-2016 RB12963 0bee19447a58b02865b792baa3993f57 371 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 25 366 69.889 T 11-11-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB12963 0bee19447a58b02865b792baa3993f57 371 Pfam PF04055 Radical SAM superfamily 129 293 1.2E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB12963 0bee19447a58b02865b792baa3993f57 371 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 25 365 9.9E-123 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB12963 0bee19447a58b02865b792baa3993f57 371 PIRSF PIRSF006004 18 371 2.5E-126 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB12963 0bee19447a58b02865b792baa3993f57 371 Gene3D G3DSA:3.20.20.70 124 340 3.8E-13 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6578 ce3d17fb6b0ab71de4baa19b5ef67912 311 SUPERFAMILY SSF48371 58 239 3.34E-7 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB6578 ce3d17fb6b0ab71de4baa19b5ef67912 311 SUPERFAMILY SSF47473 255 307 8.13E-6 T 11-11-2016 IPR011992 EF-hand domain pair RB6578 ce3d17fb6b0ab71de4baa19b5ef67912 311 Gene3D G3DSA:1.25.10.10 63 154 5.5E-5 T 11-11-2016 IPR011989 Armadillo-like helical RB6578 ce3d17fb6b0ab71de4baa19b5ef67912 311 Gene3D G3DSA:1.10.238.10 253 307 4.0E-4 T 11-11-2016 IPR011992 EF-hand domain pair RB6578 ce3d17fb6b0ab71de4baa19b5ef67912 311 ProSitePatterns PS00018 EF-hand calcium-binding domain. 266 278 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB6578 ce3d17fb6b0ab71de4baa19b5ef67912 311 ProSitePatterns PS00018 EF-hand calcium-binding domain. 289 301 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB2098 a595a589605f3f35041cdf3982bcce2f 958 Pfam PF00144 Beta-lactamase 581 933 4.4E-66 T 11-11-2016 IPR001466 Beta-lactamase-related RB2098 a595a589605f3f35041cdf3982bcce2f 958 SUPERFAMILY SSF56601 579 930 3.59E-75 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like RB2098 a595a589605f3f35041cdf3982bcce2f 958 SUPERFAMILY SSF51338 7 98 5.19E-27 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB2098 a595a589605f3f35041cdf3982bcce2f 958 SUPERFAMILY SSF51338 496 548 5.19E-27 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB2098 a595a589605f3f35041cdf3982bcce2f 958 SUPERFAMILY SSF51556 98 320 1.12E-61 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB2098 a595a589605f3f35041cdf3982bcce2f 958 SUPERFAMILY SSF51556 362 496 1.12E-61 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB2098 a595a589605f3f35041cdf3982bcce2f 958 Gene3D G3DSA:2.30.40.10 477 546 1.4E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB2098 a595a589605f3f35041cdf3982bcce2f 958 Gene3D G3DSA:2.30.40.10 44 111 2.5E-15 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB2098 a595a589605f3f35041cdf3982bcce2f 958 Gene3D G3DSA:3.20.20.140 417 476 6.2E-84 T 11-11-2016 RB2098 a595a589605f3f35041cdf3982bcce2f 958 Gene3D G3DSA:3.20.20.140 112 312 6.2E-84 T 11-11-2016 RB2098 a595a589605f3f35041cdf3982bcce2f 958 Gene3D G3DSA:3.40.710.10 571 946 6.0E-81 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like RB2098 a595a589605f3f35041cdf3982bcce2f 958 Pfam PF07969 Amidohydrolase family 86 540 1.3E-19 T 11-11-2016 IPR013108 Amidohydrolase 3 RB9871 23b4a404d5b15202038482715260e828 194 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 22 178 1.6E-58 T 11-11-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RB9871 23b4a404d5b15202038482715260e828 194 Pfam PF01842 ACT domain 24 87 4.1E-16 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RB9871 23b4a404d5b15202038482715260e828 194 Gene3D G3DSA:3.30.70.1150 103 180 7.8E-26 T 11-11-2016 RB9871 23b4a404d5b15202038482715260e828 194 Gene3D G3DSA:3.30.70.260 21 98 1.2E-30 T 11-11-2016 RB9871 23b4a404d5b15202038482715260e828 194 SUPERFAMILY SSF55021 97 178 8.39E-23 T 11-11-2016 RB9871 23b4a404d5b15202038482715260e828 194 Pfam PF10369 Small subunit of acetolactate synthase 104 177 7.5E-25 T 11-11-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RB9871 23b4a404d5b15202038482715260e828 194 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 21 96 6.0E-29 T 11-11-2016 RB9871 23b4a404d5b15202038482715260e828 194 SUPERFAMILY SSF55021 22 96 8.55E-21 T 11-11-2016 RB9427 4c7d9104d6bd4631ddb2be5de4342529 484 SMART SM00327 84 262 4.2E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9427 4c7d9104d6bd4631ddb2be5de4342529 484 Gene3D G3DSA:3.40.50.410 81 256 3.8E-26 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9427 4c7d9104d6bd4631ddb2be5de4342529 484 Pfam PF00092 von Willebrand factor type A domain 86 255 3.0E-20 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9427 4c7d9104d6bd4631ddb2be5de4342529 484 SUPERFAMILY SSF53300 81 258 2.64E-36 T 11-11-2016 IPR002035 von Willebrand factor, type A RB5451 f40d174c70e8c62c46faaca99e96254f 374 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 43 5.3E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5451 f40d174c70e8c62c46faaca99e96254f 374 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 22 42 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5451 f40d174c70e8c62c46faaca99e96254f 374 Gene3D G3DSA:3.30.700.10 24 64 2.1E-6 T 11-11-2016 RB5451 f40d174c70e8c62c46faaca99e96254f 374 SUPERFAMILY SSF54523 24 153 6.28E-20 T 11-11-2016 RB5451 f40d174c70e8c62c46faaca99e96254f 374 Pfam PF07596 Protein of unknown function (DUF1559) 48 357 4.5E-61 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5451 f40d174c70e8c62c46faaca99e96254f 374 Pfam PF13633 Prokaryotic N-terminal methylation site 22 47 2.5E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8612 acec912b85c468faac3b3a08055faf54 293 SUPERFAMILY SSF53335 11 178 6.12E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8612 acec912b85c468faac3b3a08055faf54 293 Pfam PF13649 Methyltransferase domain 58 158 2.3E-11 T 11-11-2016 RB8612 acec912b85c468faac3b3a08055faf54 293 Gene3D G3DSA:3.40.50.150 39 169 1.0E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 Gene3D G3DSA:2.60.120.200 120 275 2.0E-20 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 Pfam PF07637 Protein of unknown function (DUF1595) 491 551 1.4E-14 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 Pfam PF07624 Protein of unknown function (DUF1585) 826 893 4.2E-16 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 120 269 1.1E-22 T 11-11-2016 RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 Pfam PF07626 Protein of unknown function (DUF1587) 406 470 1.9E-13 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 Pfam PF07635 Planctomycete cytochrome C 309 363 3.6E-14 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 Pfam PF07627 Protein of unknown function (DUF1588) 708 801 1.1E-18 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 Pfam PF07631 Protein of unknown function (DUF1592) 563 689 2.0E-40 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB6432 0b4a353ced47bd0b18605f5abd3cce29 903 SUPERFAMILY SSF49899 60 275 2.72E-22 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 18 1014 0.0 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Pfam PF04998 RNA polymerase Rpb1, domain 5 757 1248 4.3E-66 T 11-11-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 SUPERFAMILY SSF64484 1310 1379 0.0 T 11-11-2016 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 SUPERFAMILY SSF64484 1109 1269 0.0 T 11-11-2016 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 SUPERFAMILY SSF64484 14 935 0.0 T 11-11-2016 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Pfam PF00623 RNA polymerase Rpb1, domain 2 343 484 2.0E-35 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 341 2.3E-84 T 11-11-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Pfam PF04983 RNA polymerase Rpb1, domain 3 488 642 2.9E-17 T 11-11-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 SMART SM00663 234 513 1.4E-167 T 11-11-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Gene3D G3DSA:2.40.50.100 972 1009 5.3E-7 T 11-11-2016 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Gene3D G3DSA:2.40.50.100 1131 1186 1.5E-11 T 11-11-2016 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Gene3D G3DSA:2.40.40.20 348 375 2.0E-37 T 11-11-2016 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Gene3D G3DSA:2.40.40.20 416 488 2.0E-37 T 11-11-2016 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 754 1.5E-11 T 11-11-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5416 ce7ed7757306a4d0b097c06090ebb968 1429 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 13 1392 10.041 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB6933 9e1baf17f5f587f1b1294b929e3ef4a1 353 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 68 215 2.1E-31 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RB6933 9e1baf17f5f587f1b1294b929e3ef4a1 353 SUPERFAMILY SSF52518 17 352 5.11E-87 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB6933 9e1baf17f5f587f1b1294b929e3ef4a1 353 Gene3D G3DSA:3.40.50.970 34 258 9.6E-88 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 Pfam PF13180 PDZ domain 306 376 2.5E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 Gene3D G3DSA:2.40.10.10 126 203 2.7E-26 T 11-11-2016 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 SUPERFAMILY SSF50494 90 295 7.08E-54 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 SMART SM00228 302 375 1.9E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 SMART SM00228 401 489 0.012 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 Gene3D G3DSA:2.30.42.10 314 385 6.1E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 Gene3D G3DSA:2.30.42.10 401 501 1.5E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 SUPERFAMILY SSF50156 402 497 5.72E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 SUPERFAMILY SSF50156 295 381 6.66E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 PRINTS PR00834 HtrA/DegQ protease family signature 333 345 3.5E-37 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 PRINTS PR00834 HtrA/DegQ protease family signature 202 226 3.5E-37 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 PRINTS PR00834 HtrA/DegQ protease family signature 140 152 3.5E-37 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 PRINTS PR00834 HtrA/DegQ protease family signature 261 278 3.5E-37 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 PRINTS PR00834 HtrA/DegQ protease family signature 161 181 3.5E-37 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 3.5E-37 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 Pfam PF13365 Trypsin-like peptidase domain 131 268 1.0E-30 T 11-11-2016 RB11706 da3ba9814a784aef3dfa3d3eafd82ccb 508 Gene3D G3DSA:2.40.10.10 204 308 8.7E-34 T 11-11-2016 RB5189 306732b0e165662d7147c66b3816d87c 579 Pfam PF07396 Phosphate-selective porin O and P 235 576 8.5E-8 T 11-11-2016 IPR010870 Phosphate-selective porin O/P RB5189 306732b0e165662d7147c66b3816d87c 579 Gene3D G3DSA:2.40.160.10 203 579 9.4E-30 T 11-11-2016 IPR023614 Porin domain RB9146 ad3d9fff6011d4e31202ca24d81eb860 552 SUPERFAMILY SSF51445 185 296 5.22E-8 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB9146 ad3d9fff6011d4e31202ca24d81eb860 552 Gene3D G3DSA:3.20.20.80 220 295 8.0E-4 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB9146 ad3d9fff6011d4e31202ca24d81eb860 552 Pfam PF13204 Protein of unknown function (DUF4038) 143 468 3.9E-69 T 11-11-2016 IPR025277 Putative glycohydrolase domain DUF4038 RB9146 ad3d9fff6011d4e31202ca24d81eb860 552 Pfam PF16586 Domain of unknown function (DUF5060) 38 104 1.5E-19 T 11-11-2016 IPR032260 Domain of unknown function DUF5060 RB2586 1943cd26454ae8b7cd80951b92240122 98 SUPERFAMILY SSF143414 6 93 4.05E-30 T 11-11-2016 RB2586 1943cd26454ae8b7cd80951b92240122 98 SMART SM00877 6 82 3.7E-33 T 11-11-2016 IPR000249 Microcompartment protein, bacteria RB2586 1943cd26454ae8b7cd80951b92240122 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 48 7.0E-18 T 11-11-2016 RB2586 1943cd26454ae8b7cd80951b92240122 98 Pfam PF00936 BMC domain 7 82 3.6E-27 T 11-11-2016 IPR000249 Microcompartment protein, bacteria RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 1423 1484 5.9E-19 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 1153 1232 1.9E-12 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 483 557 3.6E-10 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 368 415 8.0E-9 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 753 824 1.3E-9 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 1032 1093 3.6E-11 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 627 684 1.6E-18 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 1692 1753 5.8E-11 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 894 960 2.0E-13 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 1567 1618 8.6E-13 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF01345 Domain of unknown function DUF11 1294 1360 3.4E-12 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Gene3D G3DSA:2.60.40.10 60 125 7.3E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 Pfam PF07595 Planctomycete extracellular 28 51 7.0E-6 T 11-11-2016 IPR011506 Planctomycete extracellular RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 SUPERFAMILY SSF117074 83 155 1.1E-5 T 11-11-2016 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1315 1360 2.5E-11 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1442 1493 3.8E-16 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 379 426 1.2E-8 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1181 1238 6.1E-15 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1572 1624 4.1E-15 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1048 1099 2.9E-16 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 775 831 4.9E-10 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 640 691 6.7E-16 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 914 966 1.3E-12 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 503 562 2.4E-10 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1838 1881 2.6E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB10666 57024ed023298b01dc97e00abb0bdbfa 1969 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1708 1759 3.1E-12 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB4881 6ccfbdc0debe711d5571a8c57c5e21d6 391 SMART SM01321 18 193 0.007 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB4881 6ccfbdc0debe711d5571a8c57c5e21d6 391 SUPERFAMILY SSF143422 22 87 1.7E-15 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB4881 6ccfbdc0debe711d5571a8c57c5e21d6 391 SUPERFAMILY SSF143422 140 198 1.7E-15 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB4881 6ccfbdc0debe711d5571a8c57c5e21d6 391 Gene3D G3DSA:3.30.70.1290 52 88 4.6E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB4881 6ccfbdc0debe711d5571a8c57c5e21d6 391 Gene3D G3DSA:3.30.70.1290 141 196 4.6E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB4186 5608891556cee14ac9140c1d363552da 1287 Pfam PF13191 AAA ATPase domain 361 527 4.3E-11 T 11-11-2016 RB4186 5608891556cee14ac9140c1d363552da 1287 Gene3D G3DSA:3.30.200.20 31 165 3.9E-20 T 11-11-2016 RB4186 5608891556cee14ac9140c1d363552da 1287 Gene3D G3DSA:1.10.510.10 166 332 5.3E-28 T 11-11-2016 RB4186 5608891556cee14ac9140c1d363552da 1287 SMART SM00220 54 333 7.1E-22 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB4186 5608891556cee14ac9140c1d363552da 1287 SUPERFAMILY SSF52540 361 431 4.68E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4186 5608891556cee14ac9140c1d363552da 1287 SUPERFAMILY SSF52540 472 602 4.68E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4186 5608891556cee14ac9140c1d363552da 1287 SUPERFAMILY SSF56112 47 267 1.01E-48 T 11-11-2016 IPR011009 Protein kinase-like domain RB4186 5608891556cee14ac9140c1d363552da 1287 SUPERFAMILY SSF56112 301 332 1.01E-48 T 11-11-2016 IPR011009 Protein kinase-like domain RB4186 5608891556cee14ac9140c1d363552da 1287 Pfam PF00069 Protein kinase domain 55 330 6.1E-37 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB4186 5608891556cee14ac9140c1d363552da 1287 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 174 186 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB4732 d9349b65208b59e9be1ef3945e800c10 168 SUPERFAMILY SSF52540 5 136 2.62E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4732 d9349b65208b59e9be1ef3945e800c10 168 Gene3D G3DSA:3.40.50.300 8 135 1.7E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4732 d9349b65208b59e9be1ef3945e800c10 168 Pfam PF13671 AAA domain 6 143 8.4E-20 T 11-11-2016 RB2408 cbcfb0d797dac59d1cab0ebe843ec677 267 Pfam PF01797 Transposase IS200 like 40 155 3.1E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB2408 cbcfb0d797dac59d1cab0ebe843ec677 267 SUPERFAMILY SSF143422 32 155 6.67E-22 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB2408 cbcfb0d797dac59d1cab0ebe843ec677 267 SMART SM01321 38 155 9.6E-31 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB2408 cbcfb0d797dac59d1cab0ebe843ec677 267 Gene3D G3DSA:3.30.70.1290 40 155 2.3E-12 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB2062 10932fd404dd4aac355014156dd9b3bd 438 PRINTS PR00834 HtrA/DegQ protease family signature 383 395 1.0E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB2062 10932fd404dd4aac355014156dd9b3bd 438 PRINTS PR00834 HtrA/DegQ protease family signature 183 195 1.0E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB2062 10932fd404dd4aac355014156dd9b3bd 438 PRINTS PR00834 HtrA/DegQ protease family signature 205 225 1.0E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB2062 10932fd404dd4aac355014156dd9b3bd 438 PRINTS PR00834 HtrA/DegQ protease family signature 286 303 1.0E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB2062 10932fd404dd4aac355014156dd9b3bd 438 PRINTS PR00834 HtrA/DegQ protease family signature 308 325 1.0E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB2062 10932fd404dd4aac355014156dd9b3bd 438 Gene3D G3DSA:2.40.10.10 172 252 2.9E-13 T 11-11-2016 RB2062 10932fd404dd4aac355014156dd9b3bd 438 Pfam PF13365 Trypsin-like peptidase domain 174 315 7.4E-18 T 11-11-2016 RB2062 10932fd404dd4aac355014156dd9b3bd 438 SUPERFAMILY SSF50156 370 436 1.18E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB2062 10932fd404dd4aac355014156dd9b3bd 438 Gene3D G3DSA:2.40.10.10 253 341 1.5E-17 T 11-11-2016 RB2062 10932fd404dd4aac355014156dd9b3bd 438 Gene3D G3DSA:2.30.42.10 354 435 3.4E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB2062 10932fd404dd4aac355014156dd9b3bd 438 SUPERFAMILY SSF50494 148 343 4.56E-36 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB2062 10932fd404dd4aac355014156dd9b3bd 438 Pfam PF13180 PDZ domain 355 433 2.4E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB2062 10932fd404dd4aac355014156dd9b3bd 438 SMART SM00228 355 425 3.7E-4 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB8375 b2a5d8450c07b318578259fb3040416a 559 Gene3D G3DSA:3.40.50.300 325 540 1.3E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8375 b2a5d8450c07b318578259fb3040416a 559 Pfam PF12848 ABC transporter 232 304 2.5E-12 T 11-11-2016 IPR032781 ABC-transporter extension domain RB8375 b2a5d8450c07b318578259fb3040416a 559 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 4 555 1.3E-269 T 11-11-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD RB8375 b2a5d8450c07b318578259fb3040416a 559 SMART SM00382 31 238 6.0E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB8375 b2a5d8450c07b318578259fb3040416a 559 SMART SM00382 350 528 3.0E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB8375 b2a5d8450c07b318578259fb3040416a 559 SUPERFAMILY SSF52540 9 246 9.19E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8375 b2a5d8450c07b318578259fb3040416a 559 Gene3D G3DSA:3.40.50.300 139 290 3.3E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8375 b2a5d8450c07b318578259fb3040416a 559 Gene3D G3DSA:3.40.50.300 8 105 3.3E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8375 b2a5d8450c07b318578259fb3040416a 559 SUPERFAMILY SSF52540 308 536 4.07E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8375 b2a5d8450c07b318578259fb3040416a 559 Pfam PF00005 ABC transporter 22 193 1.1E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB8375 b2a5d8450c07b318578259fb3040416a 559 Pfam PF00005 ABC transporter 342 475 1.4E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB8375 b2a5d8450c07b318578259fb3040416a 559 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 Gene3D G3DSA:1.20.20.10 10 78 4.9E-22 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 TIGRFAM TIGR03322 alt_F1F0_F0_C: alternate F1F0 ATPase, F0 subunit C 2 86 6.2E-51 T 11-11-2016 IPR017708 ATPase, F0 complex, subunit C, bacterial/archaeal RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 11 79 14.248 T 11-11-2016 RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 SUPERFAMILY SSF81333 7 81 9.55E-18 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 PRINTS PR00124 ATP synthase C subunit signature 52 77 3.0E-11 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 PRINTS PR00124 ATP synthase C subunit signature 14 33 3.0E-11 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 PRINTS PR00124 ATP synthase C subunit signature 35 50 3.0E-11 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 Pfam PF00137 ATP synthase subunit C 13 76 1.7E-13 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RB4913 11ef54a657d4a81284ef80df5bf3dc41 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 23 79 2.7E-13 T 11-11-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 Pfam PF00571 CBS domain 258 305 5.5E-8 T 11-11-2016 IPR000644 CBS domain RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 TIGRFAM TIGR00400 mgtE: magnesium transporter 82 508 1.5E-86 T 11-11-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 SMART SM00116 211 254 72.0 T 11-11-2016 IPR000644 CBS domain RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 SMART SM00116 265 313 0.0014 T 11-11-2016 IPR000644 CBS domain RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 SUPERFAMILY SSF158791 64 189 3.14E-28 T 11-11-2016 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 SUPERFAMILY SSF161093 336 507 1.83E-46 T 11-11-2016 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 Gene3D G3DSA:1.25.60.10 60 187 5.6E-30 T 11-11-2016 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 Gene3D G3DSA:3.10.580.10 212 308 9.5E-15 T 11-11-2016 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 SMART SM00924 89 192 4.8E-28 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 Gene3D G3DSA:1.10.357.20 336 508 4.2E-50 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 Pfam PF01769 Divalent cation transporter 379 500 7.3E-27 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 SUPERFAMILY SSF54631 214 329 1.89E-21 T 11-11-2016 RB9119 7133c69aa44fe33c6f5b3dc31cb33fb5 511 Pfam PF03448 MgtE intracellular N domain 90 190 8.9E-25 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain RB320 43a16465187a5d0b6b015808fa704f48 429 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 167 183 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site RB320 43a16465187a5d0b6b015808fa704f48 429 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 267 381 2.3E-35 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RB320 43a16465187a5d0b6b015808fa704f48 429 PIRSF PIRSF000447 13 426 4.6E-182 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 RB320 43a16465187a5d0b6b015808fa704f48 429 Gene3D G3DSA:3.40.47.10 13 272 2.4E-82 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB320 43a16465187a5d0b6b015808fa704f48 429 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 16 259 2.6E-61 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB320 43a16465187a5d0b6b015808fa704f48 429 Gene3D G3DSA:3.40.47.10 276 425 4.4E-61 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB320 43a16465187a5d0b6b015808fa704f48 429 SMART SM00825 Beta-ketoacyl synthase 18 426 2.8E-18 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RB320 43a16465187a5d0b6b015808fa704f48 429 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 16 421 5.8E-192 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 RB320 43a16465187a5d0b6b015808fa704f48 429 SUPERFAMILY SSF53901 16 264 4.87E-81 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB320 43a16465187a5d0b6b015808fa704f48 429 SUPERFAMILY SSF53901 227 424 5.12E-72 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Gene3D G3DSA:3.40.1110.10 552 655 1.7E-9 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF81653 335 430 2.88E-21 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 526 737 3.1E-31 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Gene3D G3DSA:2.70.150.10 284 431 1.4E-24 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF81660 549 658 4.05E-14 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 530 536 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF81665 281 333 2.22E-17 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF81665 431 522 2.22E-17 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF81665 772 823 2.22E-17 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 268 820 5.2E-143 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Gene3D G3DSA:3.30.70.100 113 183 2.0E-15 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 302 809 9.1E-72 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 659 1.5E-18 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 670 680 1.5E-18 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 380 394 1.5E-18 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 723 742 1.5E-18 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 542 1.5E-18 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 746 758 1.5E-18 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 250 820 3.3E-134 T 11-11-2016 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF55008 109 183 1.7E-16 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Gene3D G3DSA:3.40.50.1000 656 769 3.2E-32 T 11-11-2016 IPR023214 HAD-like domain RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Gene3D G3DSA:3.40.50.1000 511 542 3.2E-32 T 11-11-2016 IPR023214 HAD-like domain RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Pfam PF00403 Heavy-metal-associated domain 118 178 3.5E-8 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 23 97 6.7E-10 T 11-11-2016 IPR021993 Putative metal-binding domain of cation transport ATPase RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 Pfam PF00122 E1-E2 ATPase 300 519 2.5E-66 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF56784 639 819 2.36E-37 T 11-11-2016 IPR023214 HAD-like domain RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF56784 580 592 2.36E-37 T 11-11-2016 IPR023214 HAD-like domain RB6360 6012bfdb17869ef4970cc0d69914f7d3 833 SUPERFAMILY SSF56784 528 546 2.36E-37 T 11-11-2016 IPR023214 HAD-like domain RB12377 6248ca5fad24015ba1bdf2325e109986 284 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 60 - T 11-11-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RB12377 6248ca5fad24015ba1bdf2325e109986 284 Gene3D G3DSA:3.40.50.150 2 201 8.6E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12377 6248ca5fad24015ba1bdf2325e109986 284 Gene3D G3DSA:1.10.8.100 210 278 4.4E-9 T 11-11-2016 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 RB12377 6248ca5fad24015ba1bdf2325e109986 284 SUPERFAMILY SSF53335 2 278 2.64E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12377 6248ca5fad24015ba1bdf2325e109986 284 Pfam PF00398 Ribosomal RNA adenine dimethylase 5 239 2.5E-48 T 11-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RB12377 6248ca5fad24015ba1bdf2325e109986 284 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 2 275 3.5E-67 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RB12377 6248ca5fad24015ba1bdf2325e109986 284 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 1 277 47.457 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RB12377 6248ca5fad24015ba1bdf2325e109986 284 SMART SM00650 17 202 5.6E-57 T 11-11-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RB5005 bee8947b0648886f438653b51566f044 158 ProSitePatterns PS00638 P-II protein C-terminal region signature. 129 142 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RB5005 bee8947b0648886f438653b51566f044 158 Pfam PF00543 Nitrogen regulatory protein P-II 47 151 9.1E-33 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB5005 bee8947b0648886f438653b51566f044 158 SMART SM00938 47 151 1.5E-47 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB5005 bee8947b0648886f438653b51566f044 158 SUPERFAMILY SSF54913 44 158 1.4E-33 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RB5005 bee8947b0648886f438653b51566f044 158 Gene3D G3DSA:3.30.70.120 44 158 2.6E-37 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RB5005 bee8947b0648886f438653b51566f044 158 PRINTS PR00340 P-II protein signature 66 84 7.7E-21 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB5005 bee8947b0648886f438653b51566f044 158 PRINTS PR00340 P-II protein signature 129 149 7.7E-21 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB5005 bee8947b0648886f438653b51566f044 158 PRINTS PR00340 P-II protein signature 45 60 7.7E-21 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB6961 19919ffa6e40161f0dc06802cf078847 231 Pfam PF04542 Sigma-70 region 2 60 122 4.9E-6 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6961 19919ffa6e40161f0dc06802cf078847 231 TIGRFAM TIGR02984 Sig-70_plancto1: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 46 229 4.8E-71 T 11-11-2016 IPR014326 RNA polymerase sigma-70 factor, Planctomycetaceae RB6961 19919ffa6e40161f0dc06802cf078847 231 SUPERFAMILY SSF88946 52 137 1.91E-9 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6961 19919ffa6e40161f0dc06802cf078847 231 Gene3D G3DSA:1.10.10.10 174 229 7.7E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6961 19919ffa6e40161f0dc06802cf078847 231 Gene3D G3DSA:1.10.1740.10 52 141 2.5E-10 T 11-11-2016 RB6961 19919ffa6e40161f0dc06802cf078847 231 Pfam PF08281 Sigma-70, region 4 174 225 2.2E-13 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6961 19919ffa6e40161f0dc06802cf078847 231 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 53 228 3.6E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6961 19919ffa6e40161f0dc06802cf078847 231 SUPERFAMILY SSF88659 147 229 3.74E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB633 0fb0094f9cc9e5db2bf47755c520498b 831 Pfam PF07595 Planctomycete extracellular 60 83 9.2E-5 T 11-11-2016 IPR011506 Planctomycete extracellular RB633 0fb0094f9cc9e5db2bf47755c520498b 831 SUPERFAMILY SSF63446 94 173 2.22E-5 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB633 0fb0094f9cc9e5db2bf47755c520498b 831 SUPERFAMILY SSF49478 749 804 3.22E-7 T 11-11-2016 RB633 0fb0094f9cc9e5db2bf47755c520498b 831 Pfam PF00404 Dockerin type I repeat 96 116 1.0E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB633 0fb0094f9cc9e5db2bf47755c520498b 831 SUPERFAMILY SSF48113 200 694 9.77E-157 T 11-11-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB633 0fb0094f9cc9e5db2bf47755c520498b 831 PRINTS PR00457 Animal haem peroxidase signature 478 488 5.9E-30 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 PRINTS PR00457 Animal haem peroxidase signature 385 403 5.9E-30 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 PRINTS PR00457 Animal haem peroxidase signature 270 285 5.9E-30 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 PRINTS PR00457 Animal haem peroxidase signature 598 618 5.9E-30 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 PRINTS PR00457 Animal haem peroxidase signature 403 423 5.9E-30 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 PRINTS PR00457 Animal haem peroxidase signature 667 681 5.9E-30 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 PRINTS PR00457 Animal haem peroxidase signature 428 454 5.9E-30 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 Gene3D G3DSA:2.60.40.10 750 802 1.7E-10 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB633 0fb0094f9cc9e5db2bf47755c520498b 831 Pfam PF03098 Animal haem peroxidase 201 690 6.9E-162 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 Gene3D G3DSA:1.10.640.10 330 690 4.4E-150 T 11-11-2016 IPR019791 Haem peroxidase, animal RB633 0fb0094f9cc9e5db2bf47755c520498b 831 Gene3D G3DSA:1.10.640.10 186 285 4.4E-150 T 11-11-2016 IPR019791 Haem peroxidase, animal RB11582 dd9955a55d06704f5287728d0384c28a 398 Pfam PF00266 Aminotransferase class-V 2 373 6.1E-59 T 11-11-2016 IPR000192 Aminotransferase class V domain RB11582 dd9955a55d06704f5287728d0384c28a 398 PIRSF PIRSF005572 1 389 5.7E-133 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RB11582 dd9955a55d06704f5287728d0384c28a 398 SUPERFAMILY SSF53383 1 380 1.04E-87 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB11582 dd9955a55d06704f5287728d0384c28a 398 Gene3D G3DSA:3.90.1150.10 256 379 1.1E-39 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB11582 dd9955a55d06704f5287728d0384c28a 398 Gene3D G3DSA:3.40.640.10 14 255 3.0E-62 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB11955 2839da92b959762362f9432cb22ce90b 1167 Gene3D G3DSA:1.10.510.10 210 403 3.6E-44 T 11-11-2016 RB11955 2839da92b959762362f9432cb22ce90b 1167 SUPERFAMILY SSF56112 141 410 7.28E-71 T 11-11-2016 IPR011009 Protein kinase-like domain RB11955 2839da92b959762362f9432cb22ce90b 1167 Pfam PF00069 Protein kinase domain 147 397 2.9E-45 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11955 2839da92b959762362f9432cb22ce90b 1167 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 262 274 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB11955 2839da92b959762362f9432cb22ce90b 1167 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 150 173 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB11955 2839da92b959762362f9432cb22ce90b 1167 Gene3D G3DSA:3.30.200.20 137 209 1.2E-20 T 11-11-2016 RB11955 2839da92b959762362f9432cb22ce90b 1167 SMART SM00220 144 407 1.0E-54 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9755 0e31a84886247c47d17dec3cb3680124 592 Gene3D G3DSA:3.30.1120.10 382 461 3.3E-16 T 11-11-2016 RB9755 0e31a84886247c47d17dec3cb3680124 592 ProSitePatterns PS00523 Sulfatases signature 1. 92 104 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB9755 0e31a84886247c47d17dec3cb3680124 592 Gene3D G3DSA:3.40.720.10 45 378 5.8E-105 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9755 0e31a84886247c47d17dec3cb3680124 592 SUPERFAMILY SSF53649 46 457 2.33E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9755 0e31a84886247c47d17dec3cb3680124 592 Pfam PF00884 Sulfatase 47 356 1.7E-69 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB6049 f663fb7375a44541def3d9a9001b5bdb 269 SUPERFAMILY SSF52540 68 261 1.81E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6049 f663fb7375a44541def3d9a9001b5bdb 269 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 52 250 5.1E-65 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 RB6049 f663fb7375a44541def3d9a9001b5bdb 269 Pfam PF01583 Adenylylsulphate kinase 69 242 1.2E-59 T 11-11-2016 RB6049 f663fb7375a44541def3d9a9001b5bdb 269 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 68 262 33.069 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 RB6049 f663fb7375a44541def3d9a9001b5bdb 269 Gene3D G3DSA:3.40.50.300 47 264 1.3E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 66 3.0E-19 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 SUPERFAMILY SSF52418 73 319 1.57E-80 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 338 399 2.6E-21 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 109 124 - T 11-11-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 PIRSF PIRSF000478 1 419 1.1E-158 T 11-11-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 SMART SM00941 338 413 2.3E-17 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 Gene3D G3DSA:1.20.970.10 3 67 1.5E-27 T 11-11-2016 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 SUPERFAMILY SSF47648 3 69 6.02E-20 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 Gene3D G3DSA:3.40.1030.10 74 319 5.6E-99 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 SUPERFAMILY SSF54680 328 418 3.79E-20 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 Gene3D G3DSA:3.90.1170.30 328 392 2.7E-20 T 11-11-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 393 1.5E-145 T 11-11-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB10231 4ac7138c2dad5e7a91b109b7ecd26093 423 Pfam PF00591 Glycosyl transferase family, a/b domain 77 304 5.6E-33 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RB9133 ae340bb3ac68fda8028d17bf5175403f 243 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 236 9.0E-59 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RB9133 ae340bb3ac68fda8028d17bf5175403f 243 Gene3D G3DSA:3.90.550.10 6 237 3.5E-67 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9133 ae340bb3ac68fda8028d17bf5175403f 243 SUPERFAMILY SSF53448 7 236 3.38E-52 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9133 ae340bb3ac68fda8028d17bf5175403f 243 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 238 28.539 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RB9133 ae340bb3ac68fda8028d17bf5175403f 243 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 235 5.4E-63 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RB8927 33e8d8c104b06764209b4a45267d71f9 474 SUPERFAMILY SSF46626 409 455 5.76E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8927 33e8d8c104b06764209b4a45267d71f9 474 SUPERFAMILY SSF46626 319 370 5.76E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8927 33e8d8c104b06764209b4a45267d71f9 474 Gene3D G3DSA:1.10.760.10 388 458 2.2E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8927 33e8d8c104b06764209b4a45267d71f9 474 Gene3D G3DSA:1.10.760.10 322 355 2.2E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8927 33e8d8c104b06764209b4a45267d71f9 474 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 106 190 4.7E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8927 33e8d8c104b06764209b4a45267d71f9 474 SUPERFAMILY SSF46626 102 190 7.76E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8927 33e8d8c104b06764209b4a45267d71f9 474 Pfam PF00034 Cytochrome c 330 452 1.4E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8927 33e8d8c104b06764209b4a45267d71f9 474 Gene3D G3DSA:1.10.760.10 108 190 2.2E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12313 c135763b9a691b32dce595b375e74b12 188 Pfam PF07638 ECF sigma factor 2 183 9.0E-78 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB12313 c135763b9a691b32dce595b375e74b12 188 Gene3D G3DSA:1.10.10.10 137 182 1.6E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB12313 c135763b9a691b32dce595b375e74b12 188 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 2 183 3.2E-73 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB12313 c135763b9a691b32dce595b375e74b12 188 SUPERFAMILY SSF88659 136 182 6.32E-8 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12313 c135763b9a691b32dce595b375e74b12 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 181 1.4E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9992 4d3db978acd8d130fcf17f9b59471f63 486 Pfam PF01458 Uncharacterized protein family (UPF0051) 233 457 1.5E-73 T 11-11-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RB9992 4d3db978acd8d130fcf17f9b59471f63 486 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 200 474 2.8E-80 T 11-11-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 RB9992 4d3db978acd8d130fcf17f9b59471f63 486 SUPERFAMILY SSF101960 67 482 9.68E-116 T 11-11-2016 RB4760 56abb844a026e2c26d062503a547860f 252 SUPERFAMILY SSF52172 122 238 2.42E-21 T 11-11-2016 IPR011006 CheY-like superfamily RB4760 56abb844a026e2c26d062503a547860f 252 Gene3D G3DSA:3.40.50.2300 124 238 2.9E-21 T 11-11-2016 RB4760 56abb844a026e2c26d062503a547860f 252 Gene3D G3DSA:3.40.50.2300 4 119 2.7E-33 T 11-11-2016 RB4760 56abb844a026e2c26d062503a547860f 252 SMART SM00448 4 115 2.0E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4760 56abb844a026e2c26d062503a547860f 252 SMART SM00448 122 237 9.1E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4760 56abb844a026e2c26d062503a547860f 252 Pfam PF00072 Response regulator receiver domain 6 114 1.8E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4760 56abb844a026e2c26d062503a547860f 252 Pfam PF00072 Response regulator receiver domain 124 237 2.5E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4760 56abb844a026e2c26d062503a547860f 252 SUPERFAMILY SSF52172 1 119 1.01E-34 T 11-11-2016 IPR011006 CheY-like superfamily RB1481 b7061e85b61e8b9fa689c27c64c89b5d 255 Gene3D G3DSA:2.40.33.20 29 252 7.2E-75 T 11-11-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RB1481 b7061e85b61e8b9fa689c27c64c89b5d 255 Pfam PF03473 MOSC domain 83 200 3.7E-23 T 11-11-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RB1481 b7061e85b61e8b9fa689c27c64c89b5d 255 SUPERFAMILY SSF50800 33 253 8.89E-65 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain RB12437 20b80eea4112935cd656125e204dae6e 444 SUPERFAMILY SSF81345 20 279 3.66E-27 T 11-11-2016 IPR029022 ABC transporter, BtuC-like RB12437 20b80eea4112935cd656125e204dae6e 444 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 366 435 9.2E-15 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB12437 20b80eea4112935cd656125e204dae6e 444 SUPERFAMILY SSF47979 366 422 7.46E-13 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB12437 20b80eea4112935cd656125e204dae6e 444 SMART SM00529 337 427 1.0E-4 T 11-11-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 RB12437 20b80eea4112935cd656125e204dae6e 444 Gene3D G3DSA:1.10.3470.10 53 282 4.2E-7 T 11-11-2016 IPR029022 ABC transporter, BtuC-like RB12437 20b80eea4112935cd656125e204dae6e 444 Gene3D G3DSA:1.10.60.10 377 422 7.1E-12 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB12437 20b80eea4112935cd656125e204dae6e 444 Pfam PF00950 ABC 3 transport family 14 283 4.5E-61 T 11-11-2016 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 RB12357 36a0f5c1b0c7282278ae5bde6ee668ee 144 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 69 138 2.2E-16 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) RB12357 36a0f5c1b0c7282278ae5bde6ee668ee 144 SUPERFAMILY SSF101801 66 141 3.14E-16 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) RB12357 36a0f5c1b0c7282278ae5bde6ee668ee 144 Gene3D G3DSA:2.30.330.10 59 143 2.8E-17 T 11-11-2016 RB9108 c8eca22222c2468db1dc1c3c324506c8 359 SUPERFAMILY SSF52540 44 326 3.76E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9108 c8eca22222c2468db1dc1c3c324506c8 359 SMART SM00382 67 212 0.0034 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9108 c8eca22222c2468db1dc1c3c324506c8 359 Gene3D G3DSA:3.40.50.300 51 220 1.2E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9108 c8eca22222c2468db1dc1c3c324506c8 359 Gene3D G3DSA:1.10.8.300 234 350 6.4E-33 T 11-11-2016 RB9108 c8eca22222c2468db1dc1c3c324506c8 359 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 70 204 5.8E-64 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB9108 c8eca22222c2468db1dc1c3c324506c8 359 PIRSF PIRSF002849 9 356 2.0E-123 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB12858 ed3627cea3dc82d60063ef5b7afb93f6 353 Pfam PF00005 ABC transporter 59 209 4.4E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB12858 ed3627cea3dc82d60063ef5b7afb93f6 353 SUPERFAMILY SSF52540 31 280 2.72E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12858 ed3627cea3dc82d60063ef5b7afb93f6 353 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 260 345 1.6E-21 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RB12858 ed3627cea3dc82d60063ef5b7afb93f6 353 Gene3D G3DSA:3.40.50.300 29 283 1.0E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12858 ed3627cea3dc82d60063ef5b7afb93f6 353 SMART SM00382 67 259 2.8E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain RB12858 ed3627cea3dc82d60063ef5b7afb93f6 353 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 262 328 9.6E-16 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RB12858 ed3627cea3dc82d60063ef5b7afb93f6 353 ProSitePatterns PS00211 ABC transporters family signature. 182 196 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB2799 04e1fb7ebad1ccb285da4affc31728c2 309 PRINTS PR00069 Aldo-keto reductase signature 133 150 5.1E-6 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RB2799 04e1fb7ebad1ccb285da4affc31728c2 309 PRINTS PR00069 Aldo-keto reductase signature 32 56 5.1E-6 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RB2799 04e1fb7ebad1ccb285da4affc31728c2 309 Pfam PF00248 Aldo/keto reductase family 5 297 1.7E-42 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB2799 04e1fb7ebad1ccb285da4affc31728c2 309 Gene3D G3DSA:3.20.20.100 5 300 2.8E-59 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB2799 04e1fb7ebad1ccb285da4affc31728c2 309 SUPERFAMILY SSF51430 5 300 1.96E-60 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB2460 226b7638727de24d4252ccdb6a539763 497 Gene3D G3DSA:1.25.40.10 309 485 6.3E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2460 226b7638727de24d4252ccdb6a539763 497 Gene3D G3DSA:1.25.40.10 72 267 5.1E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2460 226b7638727de24d4252ccdb6a539763 497 SUPERFAMILY SSF48452 360 485 5.96E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4571 bd2fc33a8837814b1d6cb9713368bbda 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 82 2.9E-13 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4571 bd2fc33a8837814b1d6cb9713368bbda 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 2.8E-6 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4571 bd2fc33a8837814b1d6cb9713368bbda 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 2.8E-6 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4571 bd2fc33a8837814b1d6cb9713368bbda 218 SUPERFAMILY SSF48498 103 217 6.85E-20 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RB4571 bd2fc33a8837814b1d6cb9713368bbda 218 Gene3D G3DSA:1.10.10.60 28 89 1.0E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4571 bd2fc33a8837814b1d6cb9713368bbda 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 49 79 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RB4571 bd2fc33a8837814b1d6cb9713368bbda 218 SUPERFAMILY SSF46689 26 107 4.62E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4571 bd2fc33a8837814b1d6cb9713368bbda 218 Gene3D G3DSA:1.10.357.10 92 217 6.9E-18 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RB10971 777f8c384788c70c8737a789d86922a0 303 Pfam PF00106 short chain dehydrogenase 49 237 3.5E-49 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 186 1.4E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 1.4E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 1.4E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 PIRSF PIRSF000126 6 303 1.7E-71 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 Gene3D G3DSA:3.40.50.720 49 260 1.3E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10971 777f8c384788c70c8737a789d86922a0 303 SUPERFAMILY SSF51735 47 297 8.43E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10971 777f8c384788c70c8737a789d86922a0 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 50 67 4.0E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 236 4.0E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 217 4.0E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 188 4.0E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10971 777f8c384788c70c8737a789d86922a0 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 136 4.0E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7022 29a91705ac20de6f784cc35302e2dd8e 90 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.465 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7022 29a91705ac20de6f784cc35302e2dd8e 90 Pfam PF01649 Ribosomal protein S20 2 84 6.7E-25 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7022 29a91705ac20de6f784cc35302e2dd8e 90 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.8E-25 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7022 29a91705ac20de6f784cc35302e2dd8e 90 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 90 2.0E-36 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7022 29a91705ac20de6f784cc35302e2dd8e 90 SUPERFAMILY SSF46992 3 86 2.88E-26 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7022 29a91705ac20de6f784cc35302e2dd8e 90 Gene3D G3DSA:1.20.58.110 1 86 2.4E-27 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 SMART SM00448 19 130 7.1E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 452 1.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 1.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 1.1E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 SUPERFAMILY SSF55874 335 489 1.31E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 Gene3D G3DSA:3.30.565.10 344 489 1.1E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 Gene3D G3DSA:3.30.450.20 142 256 2.5E-21 T 11-11-2016 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 SMART SM00091 148 215 3.0E-6 T 11-11-2016 IPR000014 PAS domain RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 SUPERFAMILY SSF55785 133 261 3.49E-20 T 11-11-2016 IPR000014 PAS domain RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 489 1.2E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 SMART SM00387 386 493 3.0E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 SUPERFAMILY SSF47384 272 339 1.61E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 SUPERFAMILY SSF52172 19 154 3.42E-25 T 11-11-2016 IPR011006 CheY-like superfamily RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 Pfam PF00989 PAS fold 152 260 2.2E-13 T 11-11-2016 IPR013767 PAS fold GO:0006355 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 Pfam PF00072 Response regulator receiver domain 21 130 6.1E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 SMART SM00388 278 344 1.5E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 Gene3D G3DSA:1.10.287.130 274 339 2.6E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 269 2.2E-20 T 11-11-2016 IPR000014 PAS domain RB4758 7504e940a39d0ecddb23a201f8cd7d78 509 Gene3D G3DSA:3.40.50.2300 19 141 2.0E-21 T 11-11-2016 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Gene3D G3DSA:3.30.450.20 157 279 4.3E-17 T 11-11-2016 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Gene3D G3DSA:3.30.450.20 40 151 2.4E-13 T 11-11-2016 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 546 1.5E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Gene3D G3DSA:1.10.287.130 296 351 5.5E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SUPERFAMILY SSF47226 749 864 4.32E-21 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Pfam PF00072 Response regulator receiver domain 577 690 2.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Pfam PF00512 His Kinase A (phospho-acceptor) domain 301 365 1.2E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Pfam PF08448 PAS fold 171 283 5.5E-17 T 11-11-2016 IPR013656 PAS fold-4 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Pfam PF08448 PAS fold 46 154 1.3E-18 T 11-11-2016 IPR013656 PAS fold-4 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SMART SM00091 39 105 2.4E-5 T 11-11-2016 IPR000014 PAS domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SMART SM00091 165 232 0.018 T 11-11-2016 IPR000014 PAS domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SMART SM00448 575 690 4.4E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 501 3.7E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 526 3.7E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 3.7E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 545 3.7E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SUPERFAMILY SSF55785 39 151 5.93E-17 T 11-11-2016 IPR000014 PAS domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Gene3D G3DSA:3.40.50.2300 572 691 2.0E-39 T 11-11-2016 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SUPERFAMILY SSF52172 574 696 1.57E-36 T 11-11-2016 IPR011006 CheY-like superfamily RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SMART SM00387 413 548 6.7E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 39 159 4.2E-8 T 11-11-2016 IPR000014 PAS domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 165 288 1.5E-11 T 11-11-2016 IPR000014 PAS domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SMART SM00073 764 864 5.6E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Gene3D G3DSA:3.30.565.10 352 546 3.6E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SUPERFAMILY SSF55785 156 279 1.17E-17 T 11-11-2016 IPR000014 PAS domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Pfam PF01627 Hpt domain 777 854 3.6E-15 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 Gene3D G3DSA:1.20.120.160 765 865 1.4E-20 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SMART SM00388 301 366 8.8E-27 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SUPERFAMILY SSF55874 355 546 6.02E-47 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10488 a6127a662c8d9d7df000a63de8c6cc70 871 SUPERFAMILY SSF47384 287 367 1.2E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB8113 df07518cd518058bc4110c150dd9b1ab 305 Pfam PF00005 ABC transporter 11 150 3.3E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB8113 df07518cd518058bc4110c150dd9b1ab 305 Gene3D G3DSA:3.40.50.300 1 213 1.1E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8113 df07518cd518058bc4110c150dd9b1ab 305 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB8113 df07518cd518058bc4110c150dd9b1ab 305 SMART SM00382 20 206 2.2E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB8113 df07518cd518058bc4110c150dd9b1ab 305 SUPERFAMILY SSF52540 1 218 1.9E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9280 768bc8c33748a935b66d38cb2df8a689 472 PRINTS PR00757 Flavin-containing amine oxidase signature 4 23 2.4E-7 T 11-11-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 RB9280 768bc8c33748a935b66d38cb2df8a689 472 PRINTS PR00757 Flavin-containing amine oxidase signature 425 442 2.4E-7 T 11-11-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 RB9280 768bc8c33748a935b66d38cb2df8a689 472 SUPERFAMILY SSF51905 404 447 5.99E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9280 768bc8c33748a935b66d38cb2df8a689 472 SUPERFAMILY SSF51905 1 308 5.99E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9280 768bc8c33748a935b66d38cb2df8a689 472 Gene3D G3DSA:3.50.50.60 405 447 4.9E-5 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9280 768bc8c33748a935b66d38cb2df8a689 472 Pfam PF01593 Flavin containing amine oxidoreductase 12 444 2.0E-33 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB9280 768bc8c33748a935b66d38cb2df8a689 472 Gene3D G3DSA:3.50.50.60 206 317 2.5E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9280 768bc8c33748a935b66d38cb2df8a689 472 Gene3D G3DSA:3.50.50.60 4 110 2.5E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9280 768bc8c33748a935b66d38cb2df8a689 472 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 5 445 3.2E-163 T 11-11-2016 IPR017830 Squalene-associated FAD-dependent desaturase RB12821 6a51c497df2bd95be9700c283899aa0d 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 5 114 4.6E-43 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12821 6a51c497df2bd95be9700c283899aa0d 117 PIRSF PIRSF002191 1 117 4.8E-45 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12821 6a51c497df2bd95be9700c283899aa0d 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 28.59 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12821 6a51c497df2bd95be9700c283899aa0d 117 PRINTS PR00061 Ribosomal protein L19 signature 5 34 6.3E-36 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12821 6a51c497df2bd95be9700c283899aa0d 117 PRINTS PR00061 Ribosomal protein L19 signature 35 64 6.3E-36 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12821 6a51c497df2bd95be9700c283899aa0d 117 PRINTS PR00061 Ribosomal protein L19 signature 89 114 6.3E-36 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12821 6a51c497df2bd95be9700c283899aa0d 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 11-11-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB12821 6a51c497df2bd95be9700c283899aa0d 117 Pfam PF01245 Ribosomal protein L19 5 114 5.5E-44 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12821 6a51c497df2bd95be9700c283899aa0d 117 SUPERFAMILY SSF50104 3 116 3.01E-41 T 11-11-2016 IPR008991 Translation protein SH3-like domain RB10092 158fab6b6f4a1698e5d44ad4880bf986 342 Gene3D G3DSA:3.90.850.10 123 341 2.2E-89 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RB10092 158fab6b6f4a1698e5d44ad4880bf986 342 SUPERFAMILY SSF56529 122 338 9.55E-83 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RB10092 158fab6b6f4a1698e5d44ad4880bf986 342 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 132 337 8.5E-74 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RB7208 fd7ec8b13118e7e4f5a3c8458b9ae648 178 Pfam PF02151 UvrB/uvrC motif 126 159 5.9E-8 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB3248 c461bfd7f67d643a94af28c0bccce119 675 Gene3D G3DSA:3.30.565.10 223 305 3.5E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3248 c461bfd7f67d643a94af28c0bccce119 675 SUPERFAMILY SSF55874 225 305 8.73E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3248 c461bfd7f67d643a94af28c0bccce119 675 Gene3D G3DSA:1.20.120.160 553 661 7.2E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB3248 c461bfd7f67d643a94af28c0bccce119 675 Pfam PF01627 Hpt domain 585 640 1.0E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB3248 c461bfd7f67d643a94af28c0bccce119 675 SUPERFAMILY SSF47226 567 672 1.57E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 Gene3D G3DSA:3.30.860.10 1 88 1.1E-36 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-11-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 SUPERFAMILY SSF54570 2 84 6.02E-33 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 PIRSF PIRSF002144 1 89 6.8E-31 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 Pfam PF00203 Ribosomal protein S19 3 83 5.6E-34 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 88 8.2E-39 T 11-11-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.9E-20 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.9E-20 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.9E-20 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7838 3637c628e5aed46df1c4dfe128e7531f 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.039 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB11370 b43a219599d7e96bac390c0dc151788b 118 Gene3D G3DSA:1.10.260.40 7 113 1.7E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB11370 b43a219599d7e96bac390c0dc151788b 118 SUPERFAMILY SSF47413 4 67 1.41E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB11370 b43a219599d7e96bac390c0dc151788b 118 Pfam PF13560 Helix-turn-helix domain 8 68 1.5E-9 T 11-11-2016 RB11370 b43a219599d7e96bac390c0dc151788b 118 SMART SM00530 11 66 1.1E-7 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB9848 5af3d1c62430970443f5d27471f774b5 426 PIRSF PIRSF000445 1 426 6.1E-135 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RB9848 5af3d1c62430970443f5d27471f774b5 426 Gene3D G3DSA:3.40.50.720 178 310 2.0E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9848 5af3d1c62430970443f5d27471f774b5 426 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 11-11-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RB9848 5af3d1c62430970443f5d27471f774b5 426 SUPERFAMILY SSF51735 170 317 5.01E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9848 5af3d1c62430970443f5d27471f774b5 426 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 1.0E-40 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RB9848 5af3d1c62430970443f5d27471f774b5 426 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 5 422 3.8E-106 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RB9848 5af3d1c62430970443f5d27471f774b5 426 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 176 307 2.2E-33 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RB9848 5af3d1c62430970443f5d27471f774b5 426 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 322 422 2.0E-26 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RB9848 5af3d1c62430970443f5d27471f774b5 426 SUPERFAMILY SSF69075 320 423 1.14E-23 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RB9848 5af3d1c62430970443f5d27471f774b5 426 SUPERFAMILY SSF69742 1 159 5.23E-39 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RB9848 5af3d1c62430970443f5d27471f774b5 426 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 420 26.425 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 Pfam PF00400 WD domain, G-beta repeat 262 298 1.3E-6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 Pfam PF00400 WD domain, G-beta repeat 307 341 1.9E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 Pfam PF00400 WD domain, G-beta repeat 220 257 3.8E-5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 Gene3D G3DSA:2.130.10.10 123 427 6.1E-55 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 286 300 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 SUPERFAMILY SSF46626 13 118 2.91E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 SUPERFAMILY SSF50978 124 427 1.01E-53 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 Pfam PF07635 Planctomycete cytochrome C 41 98 2.0E-12 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 SMART SM00320 260 299 1.1E-10 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 SMART SM00320 351 389 35.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 SMART SM00320 218 257 2.4E-8 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 SMART SM00320 302 341 1.6E-5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 244 258 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB5247 3b843a39eafa4db0f5942c884c5fa56a 930 Gene3D G3DSA:1.10.760.10 10 122 8.4E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4998 f3e2d066ab34aba8919b49a91c24a054 207 SMART SM00478 41 193 1.8E-4 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RB4998 f3e2d066ab34aba8919b49a91c24a054 207 SUPERFAMILY SSF48150 21 193 8.55E-36 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RB4998 f3e2d066ab34aba8919b49a91c24a054 207 Gene3D G3DSA:1.10.340.30 32 141 1.8E-25 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RB4998 f3e2d066ab34aba8919b49a91c24a054 207 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 164 7.8E-9 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RB4998 f3e2d066ab34aba8919b49a91c24a054 207 Gene3D G3DSA:1.10.1670.10 142 192 1.2E-11 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RB2624 ba91db6fb0ec3c5823f46466e17bade0 229 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 198 221 2.1E-5 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB2624 ba91db6fb0ec3c5823f46466e17bade0 229 Pfam PF07589 PEP-CTERM motif 197 218 1.4E-4 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB5806 188d0229365eff5879673c99fbeb5c0e 1136 Pfam PF00034 Cytochrome c 1005 1133 2.1E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5806 188d0229365eff5879673c99fbeb5c0e 1136 Gene3D G3DSA:2.120.10.30 103 452 8.6E-20 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB5806 188d0229365eff5879673c99fbeb5c0e 1136 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1001 1132 8.0E-33 T 11-11-2016 IPR013427 Haem-binding domain, putative RB5806 188d0229365eff5879673c99fbeb5c0e 1136 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 109 315 1.9E-44 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB5806 188d0229365eff5879673c99fbeb5c0e 1136 SUPERFAMILY SSF50952 97 347 2.75E-11 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB5806 188d0229365eff5879673c99fbeb5c0e 1136 SUPERFAMILY SSF50952 376 429 2.75E-11 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB5806 188d0229365eff5879673c99fbeb5c0e 1136 SUPERFAMILY SSF46626 1075 1135 5.24E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5806 188d0229365eff5879673c99fbeb5c0e 1136 SUPERFAMILY SSF46626 995 1039 5.24E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5806 188d0229365eff5879673c99fbeb5c0e 1136 Gene3D G3DSA:1.10.760.10 1002 1061 3.3E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5806 188d0229365eff5879673c99fbeb5c0e 1136 Gene3D G3DSA:1.10.760.10 1108 1135 3.3E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 812 845 180.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 553 586 41.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 627 660 220.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 283 316 0.11 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 849 882 19.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 1009 1042 310.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 973 1006 18.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 936 969 250.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 169 202 3.3 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 208 241 0.12 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 440 473 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 775 808 5.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 738 771 390.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 886 919 18.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 245 278 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SMART SM00028 664 697 1.5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SUPERFAMILY SSF48452 739 915 4.59E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SUPERFAMILY SSF48452 889 1036 3.37E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13432 Tetratricopeptide repeat 212 275 2.0E-4 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13432 Tetratricopeptide repeat 594 651 1.8E-6 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13432 Tetratricopeptide repeat 64 115 8.4E-4 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13432 Tetratricopeptide repeat 819 874 2.1E-6 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13432 Tetratricopeptide repeat 446 505 2.6E-4 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13432 Tetratricopeptide repeat 149 194 6.8E-4 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13432 Tetratricopeptide repeat 288 351 3.4E-7 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13432 Tetratricopeptide repeat 943 1002 0.004 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SUPERFAMILY SSF48452 544 733 6.2E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Gene3D G3DSA:1.25.40.10 417 655 8.0E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13174 Tetratricopeptide repeat 887 914 0.065 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Gene3D G3DSA:1.25.40.10 904 1035 4.3E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Pfam PF13525 Outer membrane lipoprotein 667 814 1.9E-7 T 11-11-2016 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SUPERFAMILY SSF48452 251 502 1.78E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Gene3D G3DSA:1.25.40.10 49 319 6.8E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 Gene3D G3DSA:1.25.40.10 666 903 7.1E-26 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SUPERFAMILY SSF48452 171 271 6.32E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12056 41ace46e83b3a5704dee193d35c700cf 1113 SUPERFAMILY SSF48452 48 122 6.32E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4423 e096bebb8b834a8f2d971161f26edade 165 Pfam PF14437 MafB19-like deaminase 14 112 4.3E-17 T 11-11-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RB4423 e096bebb8b834a8f2d971161f26edade 165 Gene3D G3DSA:3.40.140.10 6 155 9.0E-38 T 11-11-2016 RB4423 e096bebb8b834a8f2d971161f26edade 165 SUPERFAMILY SSF53927 9 159 1.13E-34 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 RB4423 e096bebb8b834a8f2d971161f26edade 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 62 99 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 143 1.0E-35 T 11-11-2016 RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 SUPERFAMILY SSF52540 194 505 4.75E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 410 505 9.5E-32 T 11-11-2016 IPR025158 Mg chelatase-related protein, C-terminal domain RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 SUPERFAMILY SSF54211 8 170 7.21E-30 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 9 505 3.9E-176 T 11-11-2016 IPR004482 Mg chelatase-related protein RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 Gene3D G3DSA:3.40.50.300 194 395 3.9E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 SMART SM00382 215 398 1.7E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 Pfam PF01078 Magnesium chelatase, subunit ChlI 195 400 4.3E-96 T 11-11-2016 IPR000523 Magnesium chelatase ChlI domain RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 295 310 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 214 229 3.9E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 347 359 3.9E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 295 309 3.9E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 323 336 3.9E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RB9808 63cd99d2f7fc05c4eb3747ea74bb665d 513 Gene3D G3DSA:3.30.230.10 8 169 1.8E-24 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB3808 38e8360dc349a0fc3de8a67e91f91f83 491 SUPERFAMILY SSF53649 322 483 1.31E-19 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3808 38e8360dc349a0fc3de8a67e91f91f83 491 Gene3D G3DSA:3.40.720.10 339 483 7.6E-9 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3808 38e8360dc349a0fc3de8a67e91f91f83 491 Pfam PF07394 Protein of unknown function (DUF1501) 100 489 1.2E-104 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB203 7ecece20cf4cb6dfc59f49e3f6db814b 347 Gene3D G3DSA:3.20.20.100 33 330 9.1E-57 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB203 7ecece20cf4cb6dfc59f49e3f6db814b 347 Pfam PF00248 Aldo/keto reductase family 48 325 3.9E-51 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB203 7ecece20cf4cb6dfc59f49e3f6db814b 347 SUPERFAMILY SSF51430 34 330 1.24E-62 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB9042 7df25b3841327dd3d4ad6345bbed152c 1035 Pfam PF07587 Protein of unknown function (DUF1553) 735 993 9.1E-86 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB9042 7df25b3841327dd3d4ad6345bbed152c 1035 Pfam PF07635 Planctomycete cytochrome C 92 148 6.6E-14 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB9042 7df25b3841327dd3d4ad6345bbed152c 1035 Pfam PF07583 Protein of unknown function (DUF1549) 204 417 3.5E-75 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB9042 7df25b3841327dd3d4ad6345bbed152c 1035 SUPERFAMILY SSF46626 82 172 8.84E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB10211 eb3976a25676d8c70125d293c9f638f0 261 Hamap MF_01398 ATP synthase subunit b [atpF]. 101 257 12.16 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RB10211 eb3976a25676d8c70125d293c9f638f0 261 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 112 255 1.3E-19 T 11-11-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 RB10211 eb3976a25676d8c70125d293c9f638f0 261 Pfam PF00430 ATP synthase B/B' CF(0) 109 236 5.2E-24 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RB3792 08516c676b7bde19060cedf11edc09ab 378 SMART SM00388 108 174 4.7E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3792 08516c676b7bde19060cedf11edc09ab 378 SMART SM00387 218 363 5.5E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3792 08516c676b7bde19060cedf11edc09ab 378 Gene3D G3DSA:1.10.287.130 105 160 8.9E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3792 08516c676b7bde19060cedf11edc09ab 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 224 360 3.6E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3792 08516c676b7bde19060cedf11edc09ab 378 SUPERFAMILY SSF47384 98 174 3.73E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3792 08516c676b7bde19060cedf11edc09ab 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 109 174 1.5E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3792 08516c676b7bde19060cedf11edc09ab 378 SUPERFAMILY SSF55874 163 315 1.83E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3792 08516c676b7bde19060cedf11edc09ab 378 Gene3D G3DSA:3.30.565.10 161 315 5.7E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3792 08516c676b7bde19060cedf11edc09ab 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 309 3.6E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3792 08516c676b7bde19060cedf11edc09ab 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 274 284 3.6E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3792 08516c676b7bde19060cedf11edc09ab 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 256 270 3.6E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12181 541331147686ec978033a4e4ea664dfc 273 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 28 155 6.0E-31 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RB12181 541331147686ec978033a4e4ea664dfc 273 Pfam PF00460 Flagella basal body rod protein 34 58 1.1E-4 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RB12181 541331147686ec978033a4e4ea664dfc 273 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 198 267 1.4E-15 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RB12181 541331147686ec978033a4e4ea664dfc 273 SUPERFAMILY SSF117143 112 231 2.48E-15 T 11-11-2016 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 Gene3D G3DSA:1.10.10.60 311 363 4.0E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 Pfam PF12833 Helix-turn-helix domain 335 412 2.2E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 364 406 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 SUPERFAMILY SSF53822 38 303 3.85E-29 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 Pfam PF13377 Periplasmic binding protein-like domain 141 302 6.6E-29 T 11-11-2016 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 Gene3D G3DSA:1.10.10.60 364 414 4.8E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 Gene3D G3DSA:3.40.50.2300 142 303 8.0E-24 T 11-11-2016 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 Gene3D G3DSA:3.40.50.2300 90 141 5.6E-5 T 11-11-2016 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 SMART SM00342 327 410 1.7E-28 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB13139 1fbcd2a80a89d27bdf72a355aa25877e 416 SUPERFAMILY SSF46689 363 413 5.38E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB6415 d9da8e388de5643ad5bc5c697645442a 91 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB6415 d9da8e388de5643ad5bc5c697645442a 91 Pfam PF11953 Domain of unknown function (DUF3470) 65 90 3.0E-7 T 11-11-2016 IPR022569 Ferredoxin, C-terminal RB6415 d9da8e388de5643ad5bc5c697645442a 91 SUPERFAMILY SSF54862 2 86 1.06E-20 T 11-11-2016 RB6415 d9da8e388de5643ad5bc5c697645442a 91 PRINTS PR00354 7Fe ferredoxin signature 34 51 3.3E-14 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 RB6415 d9da8e388de5643ad5bc5c697645442a 91 PRINTS PR00354 7Fe ferredoxin signature 18 28 3.3E-14 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 RB6415 d9da8e388de5643ad5bc5c697645442a 91 PRINTS PR00354 7Fe ferredoxin signature 8 18 3.3E-14 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 RB6415 d9da8e388de5643ad5bc5c697645442a 91 Pfam PF00037 4Fe-4S binding domain 33 54 1.1E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB6415 d9da8e388de5643ad5bc5c697645442a 91 Gene3D G3DSA:3.30.70.20 3 84 3.0E-18 T 11-11-2016 RB2901 395d0d26c43109fb31e0053b8441ffdb 392 Gene3D G3DSA:1.50.10.20 54 391 1.7E-39 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB2901 395d0d26c43109fb31e0053b8441ffdb 392 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 70 236 3.0E-8 T 11-11-2016 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 RB2901 395d0d26c43109fb31e0053b8441ffdb 392 SUPERFAMILY SSF48239 52 391 1.24E-39 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB8633 2de6b4389e09d7a64ea52d37337312a7 464 Gene3D G3DSA:3.40.640.10 101 343 4.8E-48 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB8633 2de6b4389e09d7a64ea52d37337312a7 464 SUPERFAMILY SSF53383 72 460 4.5E-68 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB8633 2de6b4389e09d7a64ea52d37337312a7 464 Pfam PF00202 Aminotransferase class-III 72 454 3.5E-49 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RB8633 2de6b4389e09d7a64ea52d37337312a7 464 Gene3D G3DSA:3.90.1150.10 344 459 1.2E-12 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB12984 7926c8d52b6c5034317c4423863b5240 816 SUPERFAMILY SSF48695 280 468 1.0E-28 T 11-11-2016 IPR011031 Multihaem cytochrome RB12984 7926c8d52b6c5034317c4423863b5240 816 SUPERFAMILY SSF48695 146 244 1.0E-28 T 11-11-2016 IPR011031 Multihaem cytochrome RB12984 7926c8d52b6c5034317c4423863b5240 816 SUPERFAMILY SSF48695 741 811 1.49E-12 T 11-11-2016 IPR011031 Multihaem cytochrome RB12984 7926c8d52b6c5034317c4423863b5240 816 SUPERFAMILY SSF48695 695 712 1.49E-12 T 11-11-2016 IPR011031 Multihaem cytochrome RB12984 7926c8d52b6c5034317c4423863b5240 816 SUPERFAMILY SSF48695 383 433 1.49E-12 T 11-11-2016 IPR011031 Multihaem cytochrome RB12984 7926c8d52b6c5034317c4423863b5240 816 Gene3D G3DSA:3.90.10.10 200 210 3.8E-9 T 11-11-2016 RB12984 7926c8d52b6c5034317c4423863b5240 816 Gene3D G3DSA:3.90.10.10 276 329 3.8E-9 T 11-11-2016 RB12984 7926c8d52b6c5034317c4423863b5240 816 Gene3D G3DSA:3.90.10.10 373 389 3.8E-9 T 11-11-2016 RB12984 7926c8d52b6c5034317c4423863b5240 816 Gene3D G3DSA:3.90.10.10 121 165 3.8E-9 T 11-11-2016 RB12984 7926c8d52b6c5034317c4423863b5240 816 Gene3D G3DSA:3.90.10.10 390 424 1.4E-19 T 11-11-2016 RB12984 7926c8d52b6c5034317c4423863b5240 816 Gene3D G3DSA:3.90.10.10 745 812 1.4E-19 T 11-11-2016 RB12984 7926c8d52b6c5034317c4423863b5240 816 Gene3D G3DSA:3.90.10.10 697 710 1.4E-19 T 11-11-2016 RB7229 9ab081edc9773fe8356f1a9c7ca13ae5 1063 SUPERFAMILY SSF46626 39 149 2.29E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7229 9ab081edc9773fe8356f1a9c7ca13ae5 1063 Gene3D G3DSA:2.60.120.200 476 657 4.5E-30 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB7229 9ab081edc9773fe8356f1a9c7ca13ae5 1063 SMART SM00560 506 650 3.9E-4 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB7229 9ab081edc9773fe8356f1a9c7ca13ae5 1063 Pfam PF07635 Planctomycete cytochrome C 72 127 1.2E-18 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB7229 9ab081edc9773fe8356f1a9c7ca13ae5 1063 SUPERFAMILY SSF49899 473 656 2.72E-28 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB7229 9ab081edc9773fe8356f1a9c7ca13ae5 1063 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 490 653 1.5E-24 T 11-11-2016 RB7229 9ab081edc9773fe8356f1a9c7ca13ae5 1063 Pfam PF07583 Protein of unknown function (DUF1549) 180 386 1.4E-83 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB7229 9ab081edc9773fe8356f1a9c7ca13ae5 1063 Pfam PF07587 Protein of unknown function (DUF1553) 756 1006 1.2E-86 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 Pfam PF00871 Acetokinase family 78 384 1.3E-103 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 198 215 - T 11-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 Hamap MF_00020 Acetate kinase [ackA]. 1 391 126.359 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 TIGRFAM TIGR00016 ackA: acetate kinase 65 384 5.9E-108 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 Gene3D G3DSA:3.30.420.40 152 352 5.3E-72 T 11-11-2016 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 SUPERFAMILY SSF53067 153 387 6.48E-78 T 11-11-2016 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 PRINTS PR00471 Acetate kinase family signature 198 219 8.3E-36 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 PRINTS PR00471 Acetate kinase family signature 294 307 8.3E-36 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 PRINTS PR00471 Acetate kinase family signature 316 332 8.3E-36 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 PRINTS PR00471 Acetate kinase family signature 25 36 8.3E-36 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 PRINTS PR00471 Acetate kinase family signature 169 182 8.3E-36 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 PRINTS PR00471 Acetate kinase family signature 371 383 8.3E-36 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 PIRSF PIRSF000722 61 391 2.1E-127 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB9655 e5c2f34e0918fe3a0eb648ff26eb7830 391 SUPERFAMILY SSF53067 23 190 6.04E-47 T 11-11-2016 RB12080 eb176b464723f42e0c52061add8afca6 492 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 109 317 35.421 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RB12080 eb176b464723f42e0c52061add8afca6 492 Gene3D G3DSA:3.40.50.150 117 322 8.0E-59 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12080 eb176b464723f42e0c52061add8afca6 492 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 114 314 1.3E-57 T 11-11-2016 RB12080 eb176b464723f42e0c52061add8afca6 492 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 113 315 1.3E-61 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RB12080 eb176b464723f42e0c52061add8afca6 492 SUPERFAMILY SSF53335 109 313 7.28E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12080 eb176b464723f42e0c52061add8afca6 492 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 238 253 - T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 175 188 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 Pfam PF00072 Response regulator receiver domain 13 122 5.8E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 Gene3D G3DSA:3.40.50.2300 11 143 1.5E-35 T 11-11-2016 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 237 252 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 Gene3D G3DSA:1.10.10.60 433 482 5.8E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB11186 b5d9f62944af0a648dad1c1490a4e758 491 Pfam PF02954 Bacterial regulatory protein, Fis family 449 480 9.9E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 Gene3D G3DSA:3.40.50.300 149 323 5.2E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11186 b5d9f62944af0a648dad1c1490a4e758 491 SMART SM00382 171 314 1.7E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11186 b5d9f62944af0a648dad1c1490a4e758 491 Pfam PF00158 Sigma-54 interaction domain 151 317 7.4E-67 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 SUPERFAMILY SSF46689 434 481 2.99E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 SUPERFAMILY SSF52540 151 386 6.37E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11186 b5d9f62944af0a648dad1c1490a4e758 491 SMART SM00448 11 122 1.9E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 464 484 1.3E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 447 464 1.3E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11186 b5d9f62944af0a648dad1c1490a4e758 491 SUPERFAMILY SSF52172 11 194 4.55E-42 T 11-11-2016 IPR011006 CheY-like superfamily RB11186 b5d9f62944af0a648dad1c1490a4e758 491 Gene3D G3DSA:1.10.8.60 324 390 1.3E-18 T 11-11-2016 RB9836 041efa283335e1435069b88055846f75 263 Pfam PF01493 GXGXG motif 125 188 7.2E-5 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB9836 041efa283335e1435069b88055846f75 263 TIGRFAM TIGR03122 one_C_dehyd_C: formylmethanofuran dehydrogenase subunit C 4 249 1.1E-76 T 11-11-2016 IPR017550 Formylmethanofuran dehydrogenase subunit C GO:0015948|GO:0018493|GO:0046914|GO:0055114 KEGG: 00680+1.2.99.5|MetaCyc: PWY-5209 RB9836 041efa283335e1435069b88055846f75 263 Gene3D G3DSA:2.160.20.60 125 200 1.5E-14 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB9836 041efa283335e1435069b88055846f75 263 Gene3D G3DSA:2.160.20.60 78 117 1.9E-6 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB9836 041efa283335e1435069b88055846f75 263 SUPERFAMILY SSF69336 16 205 9.81E-32 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB10539 0b200243d29bdf7452373f1d99c0af39 410 SUPERFAMILY SSF51161 90 366 8.42E-66 T 11-11-2016 IPR011004 Trimeric LpxA-like RB10539 0b200243d29bdf7452373f1d99c0af39 410 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 168 197 7.5E-7 T 11-11-2016 IPR001451 Hexapeptide repeat RB10539 0b200243d29bdf7452373f1d99c0af39 410 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 199 233 1.6E-6 T 11-11-2016 IPR001451 Hexapeptide repeat RB10539 0b200243d29bdf7452373f1d99c0af39 410 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 277 311 2.7E-7 T 11-11-2016 IPR001451 Hexapeptide repeat RB10539 0b200243d29bdf7452373f1d99c0af39 410 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 83 145 1.4E-11 T 11-11-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 RB10539 0b200243d29bdf7452373f1d99c0af39 410 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 81 381 1.0E-96 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 RB10539 0b200243d29bdf7452373f1d99c0af39 410 Gene3D G3DSA:2.160.10.10 161 264 2.2E-24 T 11-11-2016 RB10539 0b200243d29bdf7452373f1d99c0af39 410 Gene3D G3DSA:2.160.10.10 265 377 1.6E-24 T 11-11-2016 RB10539 0b200243d29bdf7452373f1d99c0af39 410 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 42 379 32.045 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 RB10539 0b200243d29bdf7452373f1d99c0af39 410 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 321 349 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RB1993 7a77635e27df08cb77c62f1dbe4974b9 427 SUPERFAMILY SSF81301 16 167 3.16E-34 T 11-11-2016 RB1993 7a77635e27df08cb77c62f1dbe4974b9 427 Gene3D G3DSA:3.30.460.10 23 171 3.8E-41 T 11-11-2016 RB1993 7a77635e27df08cb77c62f1dbe4974b9 427 SUPERFAMILY SSF81891 170 421 2.35E-44 T 11-11-2016 RB1993 7a77635e27df08cb77c62f1dbe4974b9 427 Pfam PF01743 Poly A polymerase head domain 40 171 5.3E-33 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RB1993 7a77635e27df08cb77c62f1dbe4974b9 427 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 198 258 6.3E-13 T 11-11-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RB1993 7a77635e27df08cb77c62f1dbe4974b9 427 Gene3D G3DSA:1.10.3090.10 172 394 4.3E-39 T 11-11-2016 RB422 2b809a54caf3562738600ab81a75cc77 295 Gene3D G3DSA:3.30.540.10 34 186 1.4E-48 T 11-11-2016 RB422 2b809a54caf3562738600ab81a75cc77 295 Pfam PF00459 Inositol monophosphatase family 36 293 8.5E-58 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB422 2b809a54caf3562738600ab81a75cc77 295 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 245 259 - T 11-11-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RB422 2b809a54caf3562738600ab81a75cc77 295 PRINTS PR01959 SuhB family inositol monophosphatase signature 232 244 6.0E-6 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RB422 2b809a54caf3562738600ab81a75cc77 295 PRINTS PR01959 SuhB family inositol monophosphatase signature 139 158 6.0E-6 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RB422 2b809a54caf3562738600ab81a75cc77 295 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 116 129 - T 11-11-2016 IPR020583 Inositol monophosphatase, metal-binding site RB422 2b809a54caf3562738600ab81a75cc77 295 PRINTS PR00377 Inositol monophosphatase superfamily signature 165 188 1.1E-39 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB422 2b809a54caf3562738600ab81a75cc77 295 PRINTS PR00377 Inositol monophosphatase superfamily signature 242 266 1.1E-39 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB422 2b809a54caf3562738600ab81a75cc77 295 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 85 1.1E-39 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB422 2b809a54caf3562738600ab81a75cc77 295 PRINTS PR00377 Inositol monophosphatase superfamily signature 116 132 1.1E-39 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB422 2b809a54caf3562738600ab81a75cc77 295 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 1.1E-39 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB422 2b809a54caf3562738600ab81a75cc77 295 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 232 1.1E-39 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB422 2b809a54caf3562738600ab81a75cc77 295 SUPERFAMILY SSF56655 34 292 6.02E-72 T 11-11-2016 RB422 2b809a54caf3562738600ab81a75cc77 295 Gene3D G3DSA:3.40.190.80 187 293 3.6E-27 T 11-11-2016 RB2968 4e154074dbd460dfe6ee6ba440451eb6 386 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 124 382 4.2E-66 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RB2968 4e154074dbd460dfe6ee6ba440451eb6 386 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 82 386 32.463 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RB2968 4e154074dbd460dfe6ee6ba440451eb6 386 Gene3D G3DSA:3.40.50.300 167 322 1.7E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2968 4e154074dbd460dfe6ee6ba440451eb6 386 SUPERFAMILY SSF52540 168 383 5.56E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2968 4e154074dbd460dfe6ee6ba440451eb6 386 Gene3D G3DSA:1.10.40.50 324 383 4.5E-18 T 11-11-2016 RB2968 4e154074dbd460dfe6ee6ba440451eb6 386 Pfam PF03193 Protein of unknown function, DUF258 152 324 2.6E-51 T 11-11-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 RB10686 bb23c22ee8f765424b51bc407d4575e3 104 Pfam PF05635 23S rRNA-intervening sequence protein 13 86 3.2E-16 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein RB10686 bb23c22ee8f765424b51bc407d4575e3 104 SUPERFAMILY SSF158446 12 88 7.85E-18 T 11-11-2016 RB10686 bb23c22ee8f765424b51bc407d4575e3 104 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 11 89 3.9E-18 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein RB10686 bb23c22ee8f765424b51bc407d4575e3 104 Gene3D G3DSA:1.20.1440.60 11 91 8.7E-15 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein RB2355 36f285a244f6a1caba30f9c7364d7f4a 170 Gene3D G3DSA:3.40.630.30 2 169 8.7E-46 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB2355 36f285a244f6a1caba30f9c7364d7f4a 170 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 2.5E-35 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB2355 36f285a244f6a1caba30f9c7364d7f4a 170 SUPERFAMILY SSF55729 1 152 5.01E-40 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB2763 50323175329786ff279d4fa67c90d99e 478 Pfam PF07586 Protein of unknown function (DUF1552) 62 385 3.3E-93 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB5277 ed2273b88d8950fb0f4b0830206068b7 323 SUPERFAMILY SSF51569 12 279 8.48E-50 T 11-11-2016 RB5277 ed2273b88d8950fb0f4b0830206068b7 323 PIRSF PIRSF001365 8 319 4.8E-54 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB5277 ed2273b88d8950fb0f4b0830206068b7 323 Pfam PF00701 Dihydrodipicolinate synthetase family 13 249 5.3E-28 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB5277 ed2273b88d8950fb0f4b0830206068b7 323 Gene3D G3DSA:3.20.20.70 9 316 1.2E-66 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB5277 ed2273b88d8950fb0f4b0830206068b7 323 PRINTS PR00146 Dihydrodipicolinate synthase signature 138 155 1.7E-5 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB5277 ed2273b88d8950fb0f4b0830206068b7 323 PRINTS PR00146 Dihydrodipicolinate synthase signature 46 67 1.7E-5 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB5277 ed2273b88d8950fb0f4b0830206068b7 323 PRINTS PR00146 Dihydrodipicolinate synthase signature 79 97 1.7E-5 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB5277 ed2273b88d8950fb0f4b0830206068b7 323 SMART SM01130 12 316 2.4E-38 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB10180 a51182701dd62959c568f78b13304714 602 Pfam PF01432 Peptidase family M3 209 587 1.9E-67 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RB10180 a51182701dd62959c568f78b13304714 602 Gene3D G3DSA:3.40.390.10 377 430 6.8E-5 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB10180 a51182701dd62959c568f78b13304714 602 SUPERFAMILY SSF55486 8 582 8.18E-112 T 11-11-2016 RB10180 a51182701dd62959c568f78b13304714 602 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 12 600 1.2E-192 T 11-11-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 RB10180 a51182701dd62959c568f78b13304714 602 Gene3D G3DSA:1.10.287.830 186 229 3.8E-14 T 11-11-2016 RB10180 a51182701dd62959c568f78b13304714 602 Pfam PF08439 Oligopeptidase F 119 187 3.0E-20 T 11-11-2016 IPR013647 Oligopeptidase F, N-terminal domain RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 SMART SM00873 100 273 4.2E-81 T 11-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 SMART SM00896 586 680 1.5E-15 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 SUPERFAMILY SSF46955 1 76 4.03E-17 T 11-11-2016 IPR009061 Putative DNA-binding domain RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 SUPERFAMILY SSF46955 292 362 4.12E-18 T 11-11-2016 IPR009061 Putative DNA-binding domain RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Gene3D G3DSA:3.50.40.10 87 282 5.9E-77 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Gene3D G3DSA:3.30.56.20 290 362 1.7E-25 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 674 35.744 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 SUPERFAMILY SSF55681 354 573 1.19E-24 T 11-11-2016 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Gene3D G3DSA:3.30.56.10 1 70 2.7E-19 T 11-11-2016 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Pfam PF03483 B3/4 domain 100 273 2.9E-60 T 11-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 SUPERFAMILY SSF54991 581 679 8.24E-17 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Gene3D G3DSA:3.30.70.380 588 679 3.4E-15 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 SMART SM00874 290 358 7.5E-27 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Pfam PF03147 Ferredoxin-fold anticodon binding domain 586 679 3.6E-17 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Gene3D G3DSA:3.30.930.10 381 573 3.3E-24 T 11-11-2016 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 SUPERFAMILY SSF56037 88 283 4.45E-65 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 Pfam PF03484 tRNA synthetase B5 domain 293 358 6.7E-20 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RB7112 34e7ba6f51dea4564008cd0581cd2b92 681 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 40 679 6.1E-147 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RB5734 3f0dc95fcfb95d7747623edb8ae60091 287 SUPERFAMILY SSF55073 176 273 2.67E-5 T 11-11-2016 IPR029787 Nucleotide cyclase RB5734 3f0dc95fcfb95d7747623edb8ae60091 287 Gene3D G3DSA:3.30.450.40 4 163 8.9E-9 T 11-11-2016 IPR029016 GAF domain-like RB5734 3f0dc95fcfb95d7747623edb8ae60091 287 Gene3D G3DSA:3.30.70.270 172 270 0.001 T 11-11-2016 RB5734 3f0dc95fcfb95d7747623edb8ae60091 287 SUPERFAMILY SSF55781 12 161 3.01E-15 T 11-11-2016 IPR029016 GAF domain-like RB5734 3f0dc95fcfb95d7747623edb8ae60091 287 SMART SM00065 11 160 6.5E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB6467 fb03496ec67692aa8fc92e980ddc4ea4 252 SMART SM00855 2 196 2.8E-14 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RB6467 fb03496ec67692aa8fc92e980ddc4ea4 252 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 234 7.3E-21 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RB6467 fb03496ec67692aa8fc92e980ddc4ea4 252 Gene3D G3DSA:3.40.50.1240 1 240 5.9E-37 T 11-11-2016 IPR029033 Histidine phosphatase superfamily RB6467 fb03496ec67692aa8fc92e980ddc4ea4 252 SUPERFAMILY SSF53254 1 241 6.1E-30 T 11-11-2016 IPR029033 Histidine phosphatase superfamily RB3255 83586ad9ba73c3d34363e1241839b7f5 410 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 28 410 0.0 T 11-11-2016 RB3255 83586ad9ba73c3d34363e1241839b7f5 410 Gene3D G3DSA:3.60.70.12 13 282 2.7E-91 T 11-11-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RB3255 83586ad9ba73c3d34363e1241839b7f5 410 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 410 129.282 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RB3255 83586ad9ba73c3d34363e1241839b7f5 410 SUPERFAMILY SSF56266 17 406 1.57E-123 T 11-11-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RB3255 83586ad9ba73c3d34363e1241839b7f5 410 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 410 1.7E-123 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RB3255 83586ad9ba73c3d34363e1241839b7f5 410 Pfam PF01960 ArgJ family 22 410 1.7E-132 T 11-11-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RB10491 68df4831618a55735d7cc4f9e0733e81 329 Gene3D G3DSA:3.40.50.2300 20 138 9.9E-31 T 11-11-2016 RB10491 68df4831618a55735d7cc4f9e0733e81 329 SMART SM00448 22 133 2.3E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10491 68df4831618a55735d7cc4f9e0733e81 329 Pfam PF13581 Histidine kinase-like ATPase domain 163 324 6.0E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10491 68df4831618a55735d7cc4f9e0733e81 329 Pfam PF00072 Response regulator receiver domain 24 128 7.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10491 68df4831618a55735d7cc4f9e0733e81 329 SUPERFAMILY SSF52172 21 148 1.42E-31 T 11-11-2016 IPR011006 CheY-like superfamily RB12139 19415c1ec1b505a5a85dfbc55af6062d 117 Gene3D G3DSA:1.10.287.1080 9 104 1.0E-22 T 11-11-2016 RB12139 19415c1ec1b505a5a85dfbc55af6062d 117 Pfam PF12643 MazG-like family 41 116 2.3E-11 T 11-11-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 RB12139 19415c1ec1b505a5a85dfbc55af6062d 117 PIRSF PIRSF029826 4 117 2.9E-42 T 11-11-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 RB12139 19415c1ec1b505a5a85dfbc55af6062d 117 SUPERFAMILY SSF101386 8 115 4.36E-34 T 11-11-2016 RB2590 ba0eb5952a039971216c0e42a2a53061 301 SUPERFAMILY SSF100950 76 232 4.69E-30 T 11-11-2016 RB2590 ba0eb5952a039971216c0e42a2a53061 301 Pfam PF00455 DeoR C terminal sensor domain 77 230 1.7E-49 T 11-11-2016 IPR014036 DeoR C-terminal sensor domain RB2590 ba0eb5952a039971216c0e42a2a53061 301 SUPERFAMILY SSF46785 4 71 9.88E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2590 ba0eb5952a039971216c0e42a2a53061 301 SMART SM00420 6 58 1.3E-15 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RB2590 ba0eb5952a039971216c0e42a2a53061 301 SMART SM01134 73 232 2.9E-67 T 11-11-2016 RB2590 ba0eb5952a039971216c0e42a2a53061 301 Gene3D G3DSA:3.40.50.1360 77 214 4.4E-12 T 11-11-2016 RB2590 ba0eb5952a039971216c0e42a2a53061 301 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-11-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RB2590 ba0eb5952a039971216c0e42a2a53061 301 Pfam PF08220 DeoR-like helix-turn-helix domain 6 56 3.9E-15 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RB2590 ba0eb5952a039971216c0e42a2a53061 301 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.3E-10 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RB2590 ba0eb5952a039971216c0e42a2a53061 301 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.3E-10 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RB2590 ba0eb5952a039971216c0e42a2a53061 301 Gene3D G3DSA:1.10.10.10 4 57 1.1E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8870 ebbc27079cf1fca1830a1480dd4d2469 376 SUPERFAMILY SSF52540 100 335 3.99E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8870 ebbc27079cf1fca1830a1480dd4d2469 376 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 357 37.585 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein RB8870 ebbc27079cf1fca1830a1480dd4d2469 376 SUPERFAMILY SSF117916 14 87 8.17E-9 T 11-11-2016 RB8870 ebbc27079cf1fca1830a1480dd4d2469 376 Pfam PF01883 Domain of unknown function DUF59 19 81 2.7E-8 T 11-11-2016 IPR002744 Domain of unknown function DUF59 RB8870 ebbc27079cf1fca1830a1480dd4d2469 376 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 101 356 5.7E-93 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein RB8870 ebbc27079cf1fca1830a1480dd4d2469 376 Gene3D G3DSA:3.40.50.300 101 354 1.8E-97 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8870 ebbc27079cf1fca1830a1480dd4d2469 376 ProSitePatterns PS01215 Mrp family signature. 220 236 - T 11-11-2016 IPR000808 Mrp, conserved site GO:0005524 RB13162 fa152902f01bfd090941b9ec0e343c51 851 SUPERFAMILY SSF51126 796 826 1.59E-15 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB13162 fa152902f01bfd090941b9ec0e343c51 851 SUPERFAMILY SSF51126 614 744 1.59E-15 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB13162 fa152902f01bfd090941b9ec0e343c51 851 Pfam PF13229 Right handed beta helix region 614 741 2.1E-10 T 11-11-2016 RB13162 fa152902f01bfd090941b9ec0e343c51 851 Pfam PF13229 Right handed beta helix region 464 570 1.4E-9 T 11-11-2016 RB13162 fa152902f01bfd090941b9ec0e343c51 851 SUPERFAMILY SSF51126 141 246 1.38E-27 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB13162 fa152902f01bfd090941b9ec0e343c51 851 SUPERFAMILY SSF51126 459 574 1.38E-27 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB13162 fa152902f01bfd090941b9ec0e343c51 851 SMART SM00710 552 574 100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB13162 fa152902f01bfd090941b9ec0e343c51 851 SMART SM00710 469 491 890.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB13162 fa152902f01bfd090941b9ec0e343c51 851 SMART SM00710 614 641 500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB13162 fa152902f01bfd090941b9ec0e343c51 851 SMART SM00710 722 744 6500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB13162 fa152902f01bfd090941b9ec0e343c51 851 SMART SM00710 524 551 580.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB13162 fa152902f01bfd090941b9ec0e343c51 851 SMART SM00710 493 515 180.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB13162 fa152902f01bfd090941b9ec0e343c51 851 SMART SM00710 672 694 5600.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB13162 fa152902f01bfd090941b9ec0e343c51 851 SMART SM00710 643 670 3100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB13162 fa152902f01bfd090941b9ec0e343c51 851 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 546 575 5.4E-5 T 11-11-2016 IPR022441 Parallel beta-helix repeat-2 RB13162 fa152902f01bfd090941b9ec0e343c51 851 Gene3D G3DSA:2.160.20.10 145 246 1.3E-32 T 11-11-2016 IPR012334 Pectin lyase fold RB13162 fa152902f01bfd090941b9ec0e343c51 851 Gene3D G3DSA:2.160.20.10 770 826 1.3E-32 T 11-11-2016 IPR012334 Pectin lyase fold RB13162 fa152902f01bfd090941b9ec0e343c51 851 Gene3D G3DSA:2.160.20.10 285 286 1.3E-32 T 11-11-2016 IPR012334 Pectin lyase fold RB13162 fa152902f01bfd090941b9ec0e343c51 851 Gene3D G3DSA:2.160.20.10 619 736 1.3E-32 T 11-11-2016 IPR012334 Pectin lyase fold RB13162 fa152902f01bfd090941b9ec0e343c51 851 Gene3D G3DSA:2.160.20.10 429 569 1.3E-32 T 11-11-2016 IPR012334 Pectin lyase fold RB3997 0b0907c97b3179633ef5291eded90db2 382 Pfam PF14319 Transposase zinc-binding domain 8 111 2.0E-32 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB3997 0b0907c97b3179633ef5291eded90db2 382 Pfam PF04986 Putative transposase 141 309 1.9E-43 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB12361 f9f0696f0f276024970eecec6635f5e7 351 Pfam PF00294 pfkB family carbohydrate kinase 72 334 1.1E-57 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB RB12361 f9f0696f0f276024970eecec6635f5e7 351 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 290 303 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RB12361 f9f0696f0f276024970eecec6635f5e7 351 SUPERFAMILY SSF53613 21 340 2.65E-83 T 11-11-2016 IPR029056 Ribokinase-like RB12361 f9f0696f0f276024970eecec6635f5e7 351 Gene3D G3DSA:3.40.1190.20 21 346 4.4E-76 T 11-11-2016 IPR029056 Ribokinase-like RB6911 5786a0e41bc538fb0124a2d1ea0c619c 430 SUPERFAMILY SSF54523 20 176 1.26E-27 T 11-11-2016 RB6911 5786a0e41bc538fb0124a2d1ea0c619c 430 Gene3D G3DSA:3.30.700.10 20 88 7.5E-8 T 11-11-2016 RB6911 5786a0e41bc538fb0124a2d1ea0c619c 430 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 1.9E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6911 5786a0e41bc538fb0124a2d1ea0c619c 430 Pfam PF07596 Protein of unknown function (DUF1559) 44 381 1.7E-63 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6911 5786a0e41bc538fb0124a2d1ea0c619c 430 Pfam PF13633 Prokaryotic N-terminal methylation site 18 43 1.1E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8553 a7272bd7d8b0356a175bbf79aff6c0fd 211 Gene3D G3DSA:1.10.1740.10 11 108 5.2E-20 T 11-11-2016 RB8553 a7272bd7d8b0356a175bbf79aff6c0fd 211 SUPERFAMILY SSF88946 10 105 2.2E-19 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8553 a7272bd7d8b0356a175bbf79aff6c0fd 211 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 203 1.3E-18 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8553 a7272bd7d8b0356a175bbf79aff6c0fd 211 SUPERFAMILY SSF88659 160 206 4.49E-5 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8553 a7272bd7d8b0356a175bbf79aff6c0fd 211 Pfam PF04542 Sigma-70 region 2 36 100 9.9E-14 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1180 14969913f11b89d6ae35d051b1698fb5 92 Pfam PF07623 Protein of unknown function (DUF1584) 2 28 2.7E-16 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB8889 df6bd4daadc1e2f04efac64c73c195df 527 Gene3D G3DSA:3.60.21.10 159 500 2.2E-14 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8889 df6bd4daadc1e2f04efac64c73c195df 527 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 52 148 1.2E-31 T 11-11-2016 IPR032093 Phospholipase D, N-terminal RB8889 df6bd4daadc1e2f04efac64c73c195df 527 SUPERFAMILY SSF56300 157 500 1.02E-33 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8889 df6bd4daadc1e2f04efac64c73c195df 527 Pfam PF09423 PhoD-like phosphatase 161 496 5.4E-107 T 11-11-2016 IPR018946 Alkaline phosphatase D-related RB1485 fc930743303f26af449936f7f0013b04 589 PIRSF PIRSF005047 13 587 2.9E-244 T 11-11-2016 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1485 fc930743303f26af449936f7f0013b04 589 SMART SM00483 13 329 6.3E-37 T 11-11-2016 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 RB1485 fc930743303f26af449936f7f0013b04 589 SUPERFAMILY SSF47802 11 95 1.7E-19 T 11-11-2016 IPR010996 DNA polymerase beta-like, N-terminal domain RB1485 fc930743303f26af449936f7f0013b04 589 Pfam PF14520 Helix-hairpin-helix domain 108 157 3.7E-8 T 11-11-2016 RB1485 fc930743303f26af449936f7f0013b04 589 Gene3D G3DSA:1.10.150.20 97 138 8.9E-4 T 11-11-2016 RB1485 fc930743303f26af449936f7f0013b04 589 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 267 274 8.0E-8 T 11-11-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1485 fc930743303f26af449936f7f0013b04 589 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 72 89 8.0E-8 T 11-11-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1485 fc930743303f26af449936f7f0013b04 589 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 311 328 8.0E-8 T 11-11-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1485 fc930743303f26af449936f7f0013b04 589 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 252 260 8.0E-8 T 11-11-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1485 fc930743303f26af449936f7f0013b04 589 SUPERFAMILY SSF158702 73 159 1.46E-5 T 11-11-2016 RB1485 fc930743303f26af449936f7f0013b04 589 Gene3D G3DSA:3.30.210.10 269 329 2.6E-26 T 11-11-2016 IPR029398 DNA polymerase beta, thumb domain RB1485 fc930743303f26af449936f7f0013b04 589 Pfam PF14791 DNA polymerase beta thumb 267 329 8.1E-23 T 11-11-2016 IPR029398 DNA polymerase beta, thumb domain RB1485 fc930743303f26af449936f7f0013b04 589 SUPERFAMILY SSF81301 169 329 7.36E-43 T 11-11-2016 RB1485 fc930743303f26af449936f7f0013b04 589 Gene3D G3DSA:3.20.20.140 352 578 2.9E-53 T 11-11-2016 RB1485 fc930743303f26af449936f7f0013b04 589 SMART SM00278 140 159 600.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RB1485 fc930743303f26af449936f7f0013b04 589 SMART SM00278 65 84 94.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RB1485 fc930743303f26af449936f7f0013b04 589 SMART SM00278 105 124 13.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RB1485 fc930743303f26af449936f7f0013b04 589 Pfam PF02811 PHP domain 354 435 3.8E-9 T 11-11-2016 IPR004013 PHP domain GO:0003824 RB1485 fc930743303f26af449936f7f0013b04 589 SMART SM00481 353 433 1.1E-15 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RB1485 fc930743303f26af449936f7f0013b04 589 Gene3D G3DSA:1.10.150.110 12 96 1.3E-23 T 11-11-2016 IPR027421 DNA polymerase family X lyase domain RB1485 fc930743303f26af449936f7f0013b04 589 Pfam PF14716 Helix-hairpin-helix domain 15 84 6.2E-21 T 11-11-2016 IPR010996 DNA polymerase beta-like, N-terminal domain RB1485 fc930743303f26af449936f7f0013b04 589 SUPERFAMILY SSF89550 352 580 8.24E-56 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RB1485 fc930743303f26af449936f7f0013b04 589 Gene3D G3DSA:3.30.460.10 156 268 8.3E-16 T 11-11-2016 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Gene3D G3DSA:2.130.10.10 681 758 1.3E-44 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Gene3D G3DSA:2.130.10.10 850 874 1.3E-44 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Gene3D G3DSA:2.130.10.10 464 636 1.3E-44 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 175 187 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SMART SM00220 27 317 7.0E-41 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Gene3D G3DSA:2.130.10.10 942 1059 2.5E-14 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Gene3D G3DSA:2.130.10.10 826 849 2.5E-14 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SUPERFAMILY SSF56112 24 121 1.07E-69 T 11-11-2016 IPR011009 Protein kinase-like domain RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SUPERFAMILY SSF56112 151 345 1.07E-69 T 11-11-2016 IPR011009 Protein kinase-like domain RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SUPERFAMILY SSF69322 457 765 1.11E-41 T 11-11-2016 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Pfam PF00400 WD domain, G-beta repeat 458 488 0.01 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Pfam PF00400 WD domain, G-beta repeat 682 705 0.11 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Gene3D G3DSA:1.10.510.10 70 314 4.5E-41 T 11-11-2016 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 Pfam PF00069 Protein kinase domain 27 265 8.6E-43 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 33 56 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SUPERFAMILY SSF50978 818 1057 9.61E-27 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SUPERFAMILY SSF50978 681 762 9.61E-27 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SMART SM00320 713 757 25.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SMART SM00320 493 535 45.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SMART SM00320 538 577 77.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SMART SM00320 667 706 0.027 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SMART SM00320 974 1013 1.9E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SMART SM00320 811 847 300.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1889 a70ed9f1db4a4327c16f1f694b20645e 1083 SMART SM00320 451 490 5.5E-5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB12480 c063de693b3d10f83151e93e3ff0220b 406 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 8 201 4.4E-62 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB12480 c063de693b3d10f83151e93e3ff0220b 406 SUPERFAMILY SSF142695 206 380 2.35E-63 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RB12480 c063de693b3d10f83151e93e3ff0220b 406 SUPERFAMILY SSF55821 6 203 1.1E-68 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RB12480 c063de693b3d10f83151e93e3ff0220b 406 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 211 402 7.6E-73 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RB12480 c063de693b3d10f83151e93e3ff0220b 406 PIRSF PIRSF001259 6 405 3.6E-152 T 11-11-2016 RB12480 c063de693b3d10f83151e93e3ff0220b 406 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 12 199 7.4E-69 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB12480 c063de693b3d10f83151e93e3ff0220b 406 Pfam PF00925 GTP cyclohydrolase II 210 378 3.1E-68 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RB12480 c063de693b3d10f83151e93e3ff0220b 406 Gene3D G3DSA:3.90.870.10 4 212 6.7E-78 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RB12480 c063de693b3d10f83151e93e3ff0220b 406 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 206 404 39.608 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RB3714 be3edc729a3758a919d525b301dd727a 464 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 333 423 2.2E-12 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RB3714 be3edc729a3758a919d525b301dd727a 464 SUPERFAMILY SSF53901 263 462 7.04E-27 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB3714 be3edc729a3758a919d525b301dd727a 464 Gene3D G3DSA:3.40.47.10 331 462 3.8E-18 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB3714 be3edc729a3758a919d525b301dd727a 464 Gene3D G3DSA:3.40.47.10 2 307 1.1E-33 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB3714 be3edc729a3758a919d525b301dd727a 464 SMART SM00825 Beta-ketoacyl synthase 6 440 2.3E-6 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RB3714 be3edc729a3758a919d525b301dd727a 464 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 293 7.6E-28 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB3714 be3edc729a3758a919d525b301dd727a 464 SUPERFAMILY SSF53901 4 296 2.44E-36 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB418 69f11be6ec71385dd12fc6e420c9f9be 363 SUPERFAMILY SSF103481 81 167 1.44E-13 T 11-11-2016 RB418 69f11be6ec71385dd12fc6e420c9f9be 363 Pfam PF00892 EamA-like transporter family 23 165 9.2E-10 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 PIRSF PIRSF000446 5 308 3.5E-81 T 11-11-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 8 298 6.4E-90 T 11-11-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 11 309 5.9E-21 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 SUPERFAMILY SSF52151 9 129 1.8E-70 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 SUPERFAMILY SSF52151 198 302 1.8E-70 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 Gene3D G3DSA:3.40.366.10 205 301 1.1E-66 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 Gene3D G3DSA:3.40.366.10 6 129 1.1E-66 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 Pfam PF00698 Acyl transferase domain 11 283 7.6E-24 T 11-11-2016 IPR014043 Acyl transferase RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 SUPERFAMILY SSF55048 136 204 1.83E-10 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RB314 9d93accfd3efe0f3ce0f32203a8164b5 309 Gene3D G3DSA:3.30.70.250 134 204 4.5E-20 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82714 182 272 5.1E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82693 670 719 1.99E-25 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82693 806 855 1.99E-25 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 Gene3D G3DSA:3.30.70.1430 38 138 4.4E-32 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82693 38 131 3.14E-27 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82693 563 669 2.96E-27 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 Gene3D G3DSA:3.30.70.1430 565 669 4.6E-29 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82866 296 499 1.05E-52 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 Gene3D G3DSA:3.30.2090.10 181 274 3.1E-28 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.0E-93 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82714 720 806 1.57E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 Gene3D G3DSA:1.10.3850.10 283 499 5.1E-60 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 Gene3D G3DSA:1.10.3850.10 812 1025 3.2E-56 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82866 829 1024 7.98E-44 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82693 137 181 5.75E-19 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 SUPERFAMILY SSF82693 274 332 5.75E-19 T 11-11-2016 RB9542 1e7ff3d67320b5f808aecccff5e2088a 1037 Gene3D G3DSA:3.30.2090.10 720 806 2.9E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB1574 87d58685ee626997ca3ce77f07843d6f 350 Gene3D G3DSA:3.20.20.150 61 344 1.3E-48 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB1574 87d58685ee626997ca3ce77f07843d6f 350 SUPERFAMILY SSF51658 58 343 3.27E-52 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB1574 87d58685ee626997ca3ce77f07843d6f 350 Pfam PF01261 Xylose isomerase-like TIM barrel 84 285 3.1E-32 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Gene3D G3DSA:3.30.450.20 162 297 5.2E-13 T 11-11-2016 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Pfam PF00072 Response regulator receiver domain 992 1104 6.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 PRINTS PR00344 Bacterial sensor protein C-terminal signature 905 923 7.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 942 7.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 884 7.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 PRINTS PR00344 Bacterial sensor protein C-terminal signature 888 898 7.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Gene3D G3DSA:1.10.287.130 718 784 5.5E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00086 238 280 11.0 T 11-11-2016 IPR001610 PAC motif RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00086 496 538 43.0 T 11-11-2016 IPR001610 PAC motif RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00086 91 133 0.053 T 11-11-2016 IPR001610 PAC motif RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00086 370 411 4.7 T 11-11-2016 IPR001610 PAC motif RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SUPERFAMILY SSF55785 277 409 1.59E-22 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Pfam PF13426 PAS domain 304 409 1.2E-10 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00091 292 358 9.2E-5 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00091 20 86 4.0E-5 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00091 163 229 0.0013 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 125 2.5E-11 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 416 1.6E-14 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00448 990 1106 3.8E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Gene3D G3DSA:3.30.450.40 546 704 9.5E-10 T 11-11-2016 IPR029016 GAF domain-like RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SUPERFAMILY SSF55781 546 707 3.49E-16 T 11-11-2016 IPR029016 GAF domain-like RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Gene3D G3DSA:3.30.565.10 789 942 2.0E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SUPERFAMILY SSF47384 709 789 4.51E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Pfam PF08447 PAS fold 46 124 6.4E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Pfam PF08447 PAS fold 453 531 7.3E-8 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 836 941 1.4E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Pfam PF08448 PAS fold 175 282 7.7E-10 T 11-11-2016 IPR013656 PAS fold-4 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00388 723 788 8.8E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SUPERFAMILY SSF55874 777 941 1.31E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Gene3D G3DSA:3.40.50.2300 990 1112 9.7E-34 T 11-11-2016 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SMART SM00387 835 945 2.5E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SUPERFAMILY SSF52172 990 1111 8.97E-32 T 11-11-2016 IPR011006 CheY-like superfamily RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Gene3D G3DSA:3.30.450.20 298 409 8.7E-22 T 11-11-2016 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SUPERFAMILY SSF55785 155 277 2.09E-11 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SUPERFAMILY SSF55785 411 536 4.19E-11 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 SUPERFAMILY SSF55785 22 125 1.41E-16 T 11-11-2016 IPR000014 PAS domain RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Gene3D G3DSA:3.30.450.20 415 536 1.1E-16 T 11-11-2016 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Gene3D G3DSA:3.30.450.20 20 124 8.3E-18 T 11-11-2016 RB13175 bb7a98bd6faf0ec90a77cc41d9579465 1122 Pfam PF00512 His Kinase A (phospho-acceptor) domain 723 788 7.9E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 SUPERFAMILY SSF52540 43 207 3.19E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 SUPERFAMILY SSF52540 1108 1221 3.19E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 Pfam PF02463 RecF/RecN/SMC N terminal domain 43 1215 1.9E-68 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 Pfam PF06470 SMC proteins Flexible Hinge Domain 564 678 2.3E-14 T 11-11-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 PIRSF PIRSF005719 41 1231 7.8E-288 T 11-11-2016 IPR024704 Structural maintenance of chromosomes protein RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 SMART SM00968 564 680 3.0E-14 T 11-11-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 Hamap MF_01894 Chromosome partition protein Smc [smc]. 42 1224 21.609 T 11-11-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 SUPERFAMILY SSF75553 526 728 1.27E-26 T 11-11-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 44 1221 7.3E-277 T 11-11-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 Gene3D G3DSA:3.40.50.300 820 821 3.1E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 Gene3D G3DSA:3.40.50.300 43 204 3.1E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6065 03706433cccdba3f37c9c4d2e0d27dab 1234 Gene3D G3DSA:3.40.50.300 1088 1227 3.1E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7099 5bc300a6dd7619c56f8184b82b0854fe 885 SUPERFAMILY SSF53300 500 675 6.68E-33 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7099 5bc300a6dd7619c56f8184b82b0854fe 885 SMART SM00327 502 679 1.5E-23 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7099 5bc300a6dd7619c56f8184b82b0854fe 885 Pfam PF00092 von Willebrand factor type A domain 504 671 9.9E-19 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7099 5bc300a6dd7619c56f8184b82b0854fe 885 Gene3D G3DSA:3.40.50.410 500 676 5.1E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7099 5bc300a6dd7619c56f8184b82b0854fe 885 Pfam PF12450 von Willebrand factor 395 487 3.3E-35 T 11-11-2016 IPR022156 Uncharacterised protein YfbK, N-terminal RB7099 5bc300a6dd7619c56f8184b82b0854fe 885 Pfam PF12034 Domain of unknown function (DUF3520) 680 881 4.9E-71 T 11-11-2016 IPR021908 Protein of unknown function DUF3520 RB301 9fafdb81f540319db1bf3c067cdeab80 367 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 2 264 6.3E-88 T 11-11-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 RB301 9fafdb81f540319db1bf3c067cdeab80 367 Pfam PF14815 NUDIX domain 237 354 7.7E-9 T 11-11-2016 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RB301 9fafdb81f540319db1bf3c067cdeab80 367 Gene3D G3DSA:1.10.340.30 15 116 1.1E-43 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RB301 9fafdb81f540319db1bf3c067cdeab80 367 SMART SM00525 192 212 0.0043 T 11-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RB301 9fafdb81f540319db1bf3c067cdeab80 367 SUPERFAMILY SSF48150 1 222 2.2E-69 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RB301 9fafdb81f540319db1bf3c067cdeab80 367 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 29 161 2.0E-19 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RB301 9fafdb81f540319db1bf3c067cdeab80 367 SUPERFAMILY SSF55811 236 356 3.42E-14 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB301 9fafdb81f540319db1bf3c067cdeab80 367 Gene3D G3DSA:1.10.1670.10 117 223 1.4E-32 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RB301 9fafdb81f540319db1bf3c067cdeab80 367 Gene3D G3DSA:3.90.79.10 234 358 8.5E-14 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB301 9fafdb81f540319db1bf3c067cdeab80 367 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 11-11-2016 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RB301 9fafdb81f540319db1bf3c067cdeab80 367 SMART SM00478 33 191 3.1E-36 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RB301 9fafdb81f540319db1bf3c067cdeab80 367 Pfam PF00633 Helix-hairpin-helix motif 93 119 4.9E-7 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 5 237 3.8E-84 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 Gene3D G3DSA:2.160.10.10 3 191 1.6E-44 T 11-11-2016 RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 17 45 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 140 2.9E-4 T 11-11-2016 IPR001451 Hexapeptide repeat RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 48 2.0E-10 T 11-11-2016 IPR001451 Hexapeptide repeat RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 Gene3D G3DSA:1.20.1180.10 194 254 5.5E-11 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 150 178 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 253 4.5E-18 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 SUPERFAMILY SSF51161 4 253 7.16E-67 T 11-11-2016 IPR011004 Trimeric LpxA-like RB4936 57adb87555e1d5a2e33fcd7856d54b16 269 PIRSF PIRSF000456 1 267 4.2E-97 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 RB12564 871e6f0cfae9f4fa9ad169b0508c9844 430 Gene3D G3DSA:3.30.360.10 184 405 1.4E-12 T 11-11-2016 RB12564 871e6f0cfae9f4fa9ad169b0508c9844 430 SUPERFAMILY SSF55347 173 333 1.87E-8 T 11-11-2016 RB12564 871e6f0cfae9f4fa9ad169b0508c9844 430 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 44 166 2.1E-12 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB12564 871e6f0cfae9f4fa9ad169b0508c9844 430 SUPERFAMILY SSF51735 36 196 1.89E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12564 871e6f0cfae9f4fa9ad169b0508c9844 430 Gene3D G3DSA:3.40.50.720 36 183 6.9E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10655 f4156b043d64f5082accd5b2bd3bbfd5 310 SUPERFAMILY SSF46689 258 306 6.88E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB10655 f4156b043d64f5082accd5b2bd3bbfd5 310 Pfam PF12833 Helix-turn-helix domain 227 305 4.4E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB10655 f4156b043d64f5082accd5b2bd3bbfd5 310 SUPERFAMILY SSF51215 44 106 7.85E-9 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB10655 f4156b043d64f5082accd5b2bd3bbfd5 310 Gene3D G3DSA:1.10.10.60 258 306 1.4E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB10655 f4156b043d64f5082accd5b2bd3bbfd5 310 Pfam PF02311 AraC-like ligand binding domain 42 94 1.3E-6 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB10655 f4156b043d64f5082accd5b2bd3bbfd5 310 Gene3D G3DSA:1.10.10.60 204 254 4.8E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB10655 f4156b043d64f5082accd5b2bd3bbfd5 310 SMART SM00342 220 303 1.2E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB10655 f4156b043d64f5082accd5b2bd3bbfd5 310 Gene3D G3DSA:2.60.120.280 35 99 6.5E-8 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB4967 8266dd98160f1dbd922259fda54c889c 250 Gene3D G3DSA:1.10.10.10 11 70 3.0E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4967 8266dd98160f1dbd922259fda54c889c 250 SUPERFAMILY SSF46785 13 69 2.1E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4967 8266dd98160f1dbd922259fda54c889c 250 Pfam PF13280 WYL domain 157 235 4.3E-13 T 11-11-2016 IPR026881 WYL domain RB4967 8266dd98160f1dbd922259fda54c889c 250 SMART SM00420 15 71 0.0072 T 11-11-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RB4967 8266dd98160f1dbd922259fda54c889c 250 Pfam PF08279 HTH domain 15 66 3.2E-10 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 RB3299 274e4c8d55adbe3b1b7e006450c0d5e1 330 Gene3D G3DSA:3.30.700.10 11 71 3.5E-7 T 11-11-2016 RB3299 274e4c8d55adbe3b1b7e006450c0d5e1 330 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 4.4E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3299 274e4c8d55adbe3b1b7e006450c0d5e1 330 Pfam PF13633 Prokaryotic N-terminal methylation site 8 34 1.2E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3299 274e4c8d55adbe3b1b7e006450c0d5e1 330 SUPERFAMILY SSF54523 11 145 2.12E-23 T 11-11-2016 RB3299 274e4c8d55adbe3b1b7e006450c0d5e1 330 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3299 274e4c8d55adbe3b1b7e006450c0d5e1 330 Pfam PF07596 Protein of unknown function (DUF1559) 35 311 2.0E-73 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB3584 1a7ae7387a81561d2dfd84db356dbb73 644 SUPERFAMILY SSF51735 412 504 3.54E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3584 1a7ae7387a81561d2dfd84db356dbb73 644 Gene3D G3DSA:3.40.50.720 410 500 4.0E-9 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3584 1a7ae7387a81561d2dfd84db356dbb73 644 Pfam PF00999 Sodium/hydrogen exchanger family 13 399 1.6E-41 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RB3584 1a7ae7387a81561d2dfd84db356dbb73 644 Pfam PF02254 TrkA-N domain 412 501 2.7E-6 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RB10855 ce15fcee2d72d55325949202e5cefb4f 395 SMART SM00922 161 256 2.3E-20 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RB10855 ce15fcee2d72d55325949202e5cefb4f 395 Pfam PF13378 Enolase C-terminal domain-like 169 378 1.5E-46 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB10855 ce15fcee2d72d55325949202e5cefb4f 395 SUPERFAMILY SSF51604 148 382 6.68E-54 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB10855 ce15fcee2d72d55325949202e5cefb4f 395 SUPERFAMILY SSF54826 1 131 1.77E-17 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB10855 ce15fcee2d72d55325949202e5cefb4f 395 Gene3D G3DSA:3.20.20.120 167 390 2.4E-54 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB10855 ce15fcee2d72d55325949202e5cefb4f 395 Gene3D G3DSA:3.30.390.10 1 131 4.3E-21 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB2663 371d4f3e799586f4cf0fc3d9c327ce85 543 Gene3D G3DSA:3.40.720.10 23 363 1.0E-64 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2663 371d4f3e799586f4cf0fc3d9c327ce85 543 Gene3D G3DSA:3.30.1120.10 445 496 1.1E-18 T 11-11-2016 RB2663 371d4f3e799586f4cf0fc3d9c327ce85 543 Gene3D G3DSA:3.30.1120.10 364 381 1.1E-18 T 11-11-2016 RB2663 371d4f3e799586f4cf0fc3d9c327ce85 543 Pfam PF00884 Sulfatase 25 310 4.4E-39 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2663 371d4f3e799586f4cf0fc3d9c327ce85 543 SUPERFAMILY SSF53649 23 379 4.97E-85 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2663 371d4f3e799586f4cf0fc3d9c327ce85 543 SUPERFAMILY SSF53649 443 489 4.97E-85 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7251 b2bfca5c5c1f4a08dbb050e7230f425f 429 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 23 44 1.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7251 b2bfca5c5c1f4a08dbb050e7230f425f 429 Pfam PF13633 Prokaryotic N-terminal methylation site 23 48 7.2E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7251 b2bfca5c5c1f4a08dbb050e7230f425f 429 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 23 43 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7251 b2bfca5c5c1f4a08dbb050e7230f425f 429 Gene3D G3DSA:3.30.700.10 25 83 8.2E-7 T 11-11-2016 RB7251 b2bfca5c5c1f4a08dbb050e7230f425f 429 SUPERFAMILY SSF54523 25 187 4.71E-26 T 11-11-2016 RB7251 b2bfca5c5c1f4a08dbb050e7230f425f 429 Pfam PF07596 Protein of unknown function (DUF1559) 49 385 9.4E-67 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5999 830801900e06a1f641aa7b72a6cab3b2 300 SUPERFAMILY SSF56349 3 293 1.06E-60 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB5999 830801900e06a1f641aa7b72a6cab3b2 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 299 55.83 T 11-11-2016 IPR023009 Tyrosine recombinase XerC/XerD RB5999 830801900e06a1f641aa7b72a6cab3b2 300 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 298 2.3E-99 T 11-11-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RB5999 830801900e06a1f641aa7b72a6cab3b2 300 Gene3D G3DSA:1.10.150.130 3 98 2.1E-28 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal RB5999 830801900e06a1f641aa7b72a6cab3b2 300 Gene3D G3DSA:1.10.443.10 112 292 3.3E-56 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB5999 830801900e06a1f641aa7b72a6cab3b2 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 299 2.9E-107 T 11-11-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 RB5999 830801900e06a1f641aa7b72a6cab3b2 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 90 2.0E-21 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB5999 830801900e06a1f641aa7b72a6cab3b2 300 Pfam PF00589 Phage integrase family 112 285 6.8E-46 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 PIRSF PIRSF001365 12 315 1.3E-63 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 53 70 - T 11-11-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 SUPERFAMILY SSF51569 16 308 1.99E-72 T 11-11-2016 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 Gene3D G3DSA:3.20.20.70 9 309 4.0E-80 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 PRINTS PR00146 Dihydrodipicolinate synthase signature 50 71 2.0E-14 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 PRINTS PR00146 Dihydrodipicolinate synthase signature 86 104 2.0E-14 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 PRINTS PR00146 Dihydrodipicolinate synthase signature 145 162 2.0E-14 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 SMART SM01130 16 308 9.0E-74 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB3352 4bb55fd0bc8b3c6bdd4f5ea28d4621a9 322 Pfam PF00701 Dihydrodipicolinate synthetase family 17 306 1.7E-52 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB4097 000e8aab6d11d9fb71c73e9df1991169 733 SMART SM00530 186 241 1.0E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB4097 000e8aab6d11d9fb71c73e9df1991169 733 Pfam PF01381 Helix-turn-helix 187 235 1.0E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB4097 000e8aab6d11d9fb71c73e9df1991169 733 SUPERFAMILY SSF52200 41 155 6.02E-12 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB4097 000e8aab6d11d9fb71c73e9df1991169 733 SUPERFAMILY SSF47413 183 235 2.58E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB4097 000e8aab6d11d9fb71c73e9df1991169 733 SUPERFAMILY SSF53474 246 362 2.93E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4097 000e8aab6d11d9fb71c73e9df1991169 733 Pfam PF13676 TIR domain 44 153 1.9E-13 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB4097 000e8aab6d11d9fb71c73e9df1991169 733 Gene3D G3DSA:3.40.50.1820 246 365 5.5E-5 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4097 000e8aab6d11d9fb71c73e9df1991169 733 Gene3D G3DSA:1.10.260.40 186 236 5.4E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB4097 000e8aab6d11d9fb71c73e9df1991169 733 Gene3D G3DSA:3.40.50.10140 41 156 7.6E-8 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB7098 bad4fefd590c8ba67accbcc289c448c1 193 SUPERFAMILY SSF88659 116 190 1.61E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7098 bad4fefd590c8ba67accbcc289c448c1 193 SUPERFAMILY SSF88946 33 123 3.69E-16 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7098 bad4fefd590c8ba67accbcc289c448c1 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 188 1.3E-27 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7098 bad4fefd590c8ba67accbcc289c448c1 193 Pfam PF04542 Sigma-70 region 2 41 105 2.0E-10 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7098 bad4fefd590c8ba67accbcc289c448c1 193 Pfam PF08281 Sigma-70, region 4 134 186 5.6E-15 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7098 bad4fefd590c8ba67accbcc289c448c1 193 Gene3D G3DSA:1.10.10.10 129 190 3.7E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7098 bad4fefd590c8ba67accbcc289c448c1 193 Gene3D G3DSA:1.10.1740.10 32 105 4.0E-15 T 11-11-2016 RB12241 2df729b09e8dd327e7314bf3a2337914 417 Pfam PF14592 Chondroitinase B 50 125 2.1E-7 T 11-11-2016 RB12241 2df729b09e8dd327e7314bf3a2337914 417 Gene3D G3DSA:2.160.20.10 49 402 6.4E-41 T 11-11-2016 IPR012334 Pectin lyase fold RB12241 2df729b09e8dd327e7314bf3a2337914 417 SMART SM00710 271 292 1100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB12241 2df729b09e8dd327e7314bf3a2337914 417 SMART SM00710 136 158 8900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB12241 2df729b09e8dd327e7314bf3a2337914 417 SMART SM00710 224 246 73.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB12241 2df729b09e8dd327e7314bf3a2337914 417 SMART SM00710 189 222 1000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB12241 2df729b09e8dd327e7314bf3a2337914 417 SMART SM00710 109 130 550.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB12241 2df729b09e8dd327e7314bf3a2337914 417 SUPERFAMILY SSF51126 49 409 9.31E-43 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB7849 e9f150d36fc671f0479e0d059abb5437 108 Gene3D G3DSA:2.40.50.140 1 83 1.8E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB7849 e9f150d36fc671f0479e0d059abb5437 108 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 70 17.86 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7849 e9f150d36fc671f0479e0d059abb5437 108 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 65 2.0E-29 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7849 e9f150d36fc671f0479e0d059abb5437 108 SUPERFAMILY SSF50249 1 72 6.0E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB7849 e9f150d36fc671f0479e0d059abb5437 108 Pfam PF00366 Ribosomal protein S17 1 65 1.2E-26 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7849 e9f150d36fc671f0479e0d059abb5437 108 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 1 65 7.6E-27 T 11-11-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7849 e9f150d36fc671f0479e0d059abb5437 108 PRINTS PR00973 Ribosomal protein S17 family signature 45 55 4.4E-9 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7849 e9f150d36fc671f0479e0d059abb5437 108 PRINTS PR00973 Ribosomal protein S17 family signature 55 62 4.4E-9 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7849 e9f150d36fc671f0479e0d059abb5437 108 PRINTS PR00973 Ribosomal protein S17 family signature 13 36 4.4E-9 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB2066 3f87172b04d096b1826b006c3b7be79d 376 SUPERFAMILY SSF50156 206 287 2.5E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB2066 3f87172b04d096b1826b006c3b7be79d 376 SMART SM00228 208 280 5.4E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB2066 3f87172b04d096b1826b006c3b7be79d 376 Gene3D G3DSA:2.30.42.10 207 293 2.8E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB2066 3f87172b04d096b1826b006c3b7be79d 376 Pfam PF13365 Trypsin-like peptidase domain 126 344 1.4E-6 T 11-11-2016 RB2066 3f87172b04d096b1826b006c3b7be79d 376 SUPERFAMILY SSF50494 319 362 3.46E-15 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB2066 3f87172b04d096b1826b006c3b7be79d 376 SUPERFAMILY SSF50494 111 204 3.46E-15 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB2066 3f87172b04d096b1826b006c3b7be79d 376 Gene3D G3DSA:2.40.10.10 64 159 2.5E-6 T 11-11-2016 RB2066 3f87172b04d096b1826b006c3b7be79d 376 Pfam PF13180 PDZ domain 208 288 2.8E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB2066 3f87172b04d096b1826b006c3b7be79d 376 Gene3D G3DSA:2.40.10.10 294 370 1.6E-10 T 11-11-2016 RB8731 6e8d56a274fba777a590ea2648feb365 358 Gene3D G3DSA:3.40.1190.20 11 353 8.8E-56 T 11-11-2016 IPR029056 Ribokinase-like RB8731 6e8d56a274fba777a590ea2648feb365 358 SUPERFAMILY SSF53613 17 348 5.92E-47 T 11-11-2016 IPR029056 Ribokinase-like RB8731 6e8d56a274fba777a590ea2648feb365 358 Pfam PF00294 pfkB family carbohydrate kinase 144 332 4.9E-20 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB RB2521 8454a99b286e20fb6b9c068c70d26ace 314 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 2 304 46.762 T 11-11-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|Reactome: R-HSA-6787639 RB2521 8454a99b286e20fb6b9c068c70d26ace 314 SUPERFAMILY SSF51735 2 305 4.54E-70 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2521 8454a99b286e20fb6b9c068c70d26ace 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 236 8.3E-69 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB2521 8454a99b286e20fb6b9c068c70d26ace 314 Gene3D G3DSA:3.90.25.10 283 305 3.7E-10 T 11-11-2016 RB2521 8454a99b286e20fb6b9c068c70d26ace 314 Gene3D G3DSA:3.90.25.10 208 230 3.7E-10 T 11-11-2016 RB2521 8454a99b286e20fb6b9c068c70d26ace 314 Gene3D G3DSA:3.40.50.720 3 207 2.4E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8096 643b1e8897a97f107c57820602fbf4b5 423 Pfam PF13633 Prokaryotic N-terminal methylation site 8 32 3.1E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8096 643b1e8897a97f107c57820602fbf4b5 423 TIGRFAM TIGR04294 pre_pil_HX9DG: prepilin-type processing-associated H-X9-DG domain 351 365 1.1E-4 T 11-11-2016 IPR027558 Prepilin-type processing-associated H-X9-DG domain RB8096 643b1e8897a97f107c57820602fbf4b5 423 Pfam PF07596 Protein of unknown function (DUF1559) 35 373 1.5E-66 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8096 643b1e8897a97f107c57820602fbf4b5 423 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 7.8E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8096 643b1e8897a97f107c57820602fbf4b5 423 Gene3D G3DSA:3.30.700.10 10 47 7.6E-7 T 11-11-2016 RB8096 643b1e8897a97f107c57820602fbf4b5 423 SUPERFAMILY SSF54523 10 99 1.65E-15 T 11-11-2016 RB8096 643b1e8897a97f107c57820602fbf4b5 423 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB9091 26df8406c309eeb8c3bc61888c567892 667 SUPERFAMILY SSF53649 92 490 8.0E-118 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9091 26df8406c309eeb8c3bc61888c567892 667 ProSitePatterns PS00523 Sulfatases signature 1. 138 150 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB9091 26df8406c309eeb8c3bc61888c567892 667 Gene3D G3DSA:3.40.720.10 91 424 7.1E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9091 26df8406c309eeb8c3bc61888c567892 667 Pfam PF00884 Sulfatase 93 401 3.3E-72 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9091 26df8406c309eeb8c3bc61888c567892 667 Gene3D G3DSA:3.30.1120.10 433 493 1.8E-9 T 11-11-2016 RB1191 7300db3318d9233574812a8298fa9ac2 126 Pfam PF14319 Transposase zinc-binding domain 8 111 1.2E-33 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB10431 43ed08b14e94ca36423a380f1bf0f9a0 323 SUPERFAMILY SSF52540 8 68 2.88E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10431 43ed08b14e94ca36423a380f1bf0f9a0 323 SUPERFAMILY SSF52540 107 274 2.88E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10431 43ed08b14e94ca36423a380f1bf0f9a0 323 Gene3D G3DSA:3.40.50.300 10 58 9.9E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10431 43ed08b14e94ca36423a380f1bf0f9a0 323 Gene3D G3DSA:3.40.50.300 103 267 9.9E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10431 43ed08b14e94ca36423a380f1bf0f9a0 323 Pfam PF13469 Sulfotransferase family 11 173 3.4E-6 T 11-11-2016 RB9269 024aa8a9362df22760717af61a0e1265 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 11-11-2016 IPR000540 Flagellar motor protein MotA, conserved site RB9269 024aa8a9362df22760717af61a0e1265 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 7.9E-23 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RB3632 2b0ff256defe83b224736f067d30767c 249 Pfam PF00106 short chain dehydrogenase 8 192 1.5E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.8E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.8E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.8E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.8E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.8E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.5E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.5E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.5E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3632 2b0ff256defe83b224736f067d30767c 249 SUPERFAMILY SSF51735 1 226 2.43E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3632 2b0ff256defe83b224736f067d30767c 249 Gene3D G3DSA:3.40.50.720 7 216 5.6E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3632 2b0ff256defe83b224736f067d30767c 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB10468 33e0b339e5c9da2a378b7b354afbabd2 73 Gene3D G3DSA:2.40.50.140 3 72 1.7E-35 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10468 33e0b339e5c9da2a378b7b354afbabd2 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 25.857 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RB10468 33e0b339e5c9da2a378b7b354afbabd2 73 Pfam PF01176 Translation initiation factor 1A / IF-1 9 71 5.0E-26 T 11-11-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RB10468 33e0b339e5c9da2a378b7b354afbabd2 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 71 2.7E-33 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RB10468 33e0b339e5c9da2a378b7b354afbabd2 73 SMART SM00316 5 73 4.9E-4 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB10468 33e0b339e5c9da2a378b7b354afbabd2 73 SUPERFAMILY SSF50249 4 71 3.74E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB4459 c5805b45a7b753e1675b0120f4ff581d 462 SUPERFAMILY SSF82861 180 262 4.32E-7 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RB4459 c5805b45a7b753e1675b0120f4ff581d 462 Pfam PF04972 BON domain 81 148 2.7E-10 T 11-11-2016 IPR007055 BON domain RB4459 c5805b45a7b753e1675b0120f4ff581d 462 Pfam PF00924 Mechanosensitive ion channel 220 420 1.0E-46 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RB4459 c5805b45a7b753e1675b0120f4ff581d 462 SUPERFAMILY SSF50182 263 325 3.11E-14 T 11-11-2016 IPR010920 LSM domain RB4459 c5805b45a7b753e1675b0120f4ff581d 462 SUPERFAMILY SSF82689 330 431 4.32E-25 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RB4459 c5805b45a7b753e1675b0120f4ff581d 462 Gene3D G3DSA:3.30.70.100 332 418 2.9E-21 T 11-11-2016 RB4459 c5805b45a7b753e1675b0120f4ff581d 462 Gene3D G3DSA:2.30.30.60 279 325 1.0E-13 T 11-11-2016 RB10995 b8e5aae3aac2916b991c632df301bcb5 781 Gene3D G3DSA:3.30.200.20 65 187 6.1E-26 T 11-11-2016 RB10995 b8e5aae3aac2916b991c632df301bcb5 781 SUPERFAMILY SSF56112 80 183 2.66E-66 T 11-11-2016 IPR011009 Protein kinase-like domain RB10995 b8e5aae3aac2916b991c632df301bcb5 781 SUPERFAMILY SSF56112 220 406 2.66E-66 T 11-11-2016 IPR011009 Protein kinase-like domain RB10995 b8e5aae3aac2916b991c632df301bcb5 781 Gene3D G3DSA:1.10.510.10 224 401 4.0E-39 T 11-11-2016 RB10995 b8e5aae3aac2916b991c632df301bcb5 781 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 245 257 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB10995 b8e5aae3aac2916b991c632df301bcb5 781 SMART SM00220 89 389 9.3E-36 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10995 b8e5aae3aac2916b991c632df301bcb5 781 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 95 118 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB10995 b8e5aae3aac2916b991c632df301bcb5 781 Pfam PF00069 Protein kinase domain 90 383 1.2E-36 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB5039 86b41fc1d3accb633db0cac16f2be002 498 Gene3D G3DSA:3.50.50.60 438 494 1.0E-53 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5039 86b41fc1d3accb633db0cac16f2be002 498 Gene3D G3DSA:3.50.50.60 16 144 1.0E-53 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5039 86b41fc1d3accb633db0cac16f2be002 498 Gene3D G3DSA:3.50.50.60 188 301 1.0E-53 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5039 86b41fc1d3accb633db0cac16f2be002 498 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 98 121 - T 11-11-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RB5039 86b41fc1d3accb633db0cac16f2be002 498 SUPERFAMILY SSF54373 278 445 5.79E-28 T 11-11-2016 RB5039 86b41fc1d3accb633db0cac16f2be002 498 SUPERFAMILY SSF51905 441 496 6.74E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5039 86b41fc1d3accb633db0cac16f2be002 498 SUPERFAMILY SSF51905 17 282 6.74E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5039 86b41fc1d3accb633db0cac16f2be002 498 Pfam PF05199 GMC oxidoreductase 363 489 2.4E-29 T 11-11-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 RB5039 86b41fc1d3accb633db0cac16f2be002 498 PIRSF PIRSF000137 1 498 3.1E-97 T 11-11-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 RB5039 86b41fc1d3accb633db0cac16f2be002 498 Pfam PF00732 GMC oxidoreductase 17 283 5.2E-19 T 11-11-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RB7533 0dcea2479a6e6ba2edc6acd1cb694053 123 SUPERFAMILY SSF51182 4 108 6.75E-10 T 11-11-2016 IPR011051 RmlC-like cupin domain RB7533 0dcea2479a6e6ba2edc6acd1cb694053 123 Gene3D G3DSA:2.60.120.10 7 107 2.8E-8 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB8904 7364057a218b3f2c9ed792b62f8b39b3 366 SUPERFAMILY SSF51735 16 361 2.72E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8904 7364057a218b3f2c9ed792b62f8b39b3 366 Gene3D G3DSA:3.40.50.720 16 233 1.4E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8904 7364057a218b3f2c9ed792b62f8b39b3 366 Gene3D G3DSA:3.90.25.10 234 363 7.9E-11 T 11-11-2016 RB8904 7364057a218b3f2c9ed792b62f8b39b3 366 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 274 4.2E-25 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB3657 313162332b143de39a56ec5104e37ab9 262 SUPERFAMILY SSF51735 1 257 4.69E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 3.0E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.0E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.0E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.0E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.0E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.0E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 257 1.9E-40 T 11-11-2016 RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 7.0E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 7.0E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 7.0E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB3657 313162332b143de39a56ec5104e37ab9 262 Gene3D G3DSA:3.40.50.720 2 258 1.7E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9200 db1cad7b719803bc4ed57f628c7d96a3 283 Gene3D G3DSA:3.40.50.10410 76 176 1.2E-29 T 11-11-2016 IPR023215 Nitrophenylphosphatase-like domain RB9200 db1cad7b719803bc4ed57f628c7d96a3 283 Pfam PF13242 HAD-hyrolase-like 178 251 1.1E-21 T 11-11-2016 RB9200 db1cad7b719803bc4ed57f628c7d96a3 283 PIRSF PIRSF000915 4 256 1.8E-55 T 11-11-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RB9200 db1cad7b719803bc4ed57f628c7d96a3 283 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 227 7.1E-47 T 11-11-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RB9200 db1cad7b719803bc4ed57f628c7d96a3 283 Gene3D G3DSA:3.40.50.1000 177 253 1.7E-42 T 11-11-2016 IPR023214 HAD-like domain RB9200 db1cad7b719803bc4ed57f628c7d96a3 283 Gene3D G3DSA:3.40.50.1000 4 75 1.7E-42 T 11-11-2016 IPR023214 HAD-like domain RB9200 db1cad7b719803bc4ed57f628c7d96a3 283 SUPERFAMILY SSF56784 4 252 1.32E-67 T 11-11-2016 IPR023214 HAD-like domain RB9200 db1cad7b719803bc4ed57f628c7d96a3 283 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 1.8E-27 T 11-11-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA RB5445 0f4f232a96c858752a98765ad1aab968 322 Pfam PF00149 Calcineurin-like phosphoesterase 45 278 1.3E-14 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB5445 0f4f232a96c858752a98765ad1aab968 322 SUPERFAMILY SSF56300 45 165 1.25E-23 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5445 0f4f232a96c858752a98765ad1aab968 322 SUPERFAMILY SSF56300 200 290 1.25E-23 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5445 0f4f232a96c858752a98765ad1aab968 322 Gene3D G3DSA:3.60.21.10 176 286 3.4E-17 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5445 0f4f232a96c858752a98765ad1aab968 322 Gene3D G3DSA:3.60.21.10 45 122 3.4E-17 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 Pfam PF00140 Sigma-70 factor, region 1.2 68 97 3.0E-13 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 SUPERFAMILY SSF88659 359 432 4.58E-18 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 Pfam PF04539 Sigma-70 region 3 365 439 1.2E-20 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 Pfam PF04542 Sigma-70 region 2 288 356 5.6E-19 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 PRINTS PR00046 Major sigma-70 factor signature 494 505 1.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 PRINTS PR00046 Major sigma-70 factor signature 458 470 1.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 PRINTS PR00046 Major sigma-70 factor signature 479 494 1.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 PRINTS PR00046 Major sigma-70 factor signature 310 323 1.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 PRINTS PR00046 Major sigma-70 factor signature 334 342 1.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 Pfam PF04545 Sigma-70, region 4 454 506 4.7E-17 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 SUPERFAMILY SSF88946 65 143 1.73E-54 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 SUPERFAMILY SSF88946 254 356 1.73E-54 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 Gene3D G3DSA:1.10.10.10 449 519 1.2E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 310 323 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 Gene3D G3DSA:1.10.10.10 359 409 1.4E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 Gene3D G3DSA:1.10.601.10 61 115 4.9E-9 T 11-11-2016 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 Gene3D G3DSA:1.10.601.10 167 355 7.6E-53 T 11-11-2016 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 SUPERFAMILY SSF88659 417 512 4.3E-25 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 282 507 5.9E-37 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10339 f0bd59c59029f3062c5943ef7ddb49a3 519 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 479 505 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2992 e842083c2c1f4182ecce0af008a94597 614 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 472 487 5.6E-15 T 11-11-2016 RB2992 e842083c2c1f4182ecce0af008a94597 614 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 322 341 5.6E-15 T 11-11-2016 RB2992 e842083c2c1f4182ecce0af008a94597 614 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 525 537 5.6E-15 T 11-11-2016 RB2992 e842083c2c1f4182ecce0af008a94597 614 Gene3D G3DSA:3.20.20.60 287 594 1.1E-77 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB2992 e842083c2c1f4182ecce0af008a94597 614 Pfam PF05524 PEP-utilising enzyme, N-terminal 22 150 6.3E-13 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RB2992 e842083c2c1f4182ecce0af008a94597 614 Gene3D G3DSA:3.50.30.10 158 278 3.5E-36 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB2992 e842083c2c1f4182ecce0af008a94597 614 Pfam PF00391 PEP-utilising enzyme, mobile domain 176 249 5.1E-20 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB2992 e842083c2c1f4182ecce0af008a94597 614 SUPERFAMILY SSF47831 55 167 1.57E-17 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RB2992 e842083c2c1f4182ecce0af008a94597 614 SUPERFAMILY SSF52009 149 267 1.2E-32 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB2992 e842083c2c1f4182ecce0af008a94597 614 PIRSF PIRSF000732 17 599 2.5E-177 T 11-11-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RB2992 e842083c2c1f4182ecce0af008a94597 614 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 31 590 1.9E-123 T 11-11-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RB2992 e842083c2c1f4182ecce0af008a94597 614 SUPERFAMILY SSF51621 286 571 1.62E-76 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB2992 e842083c2c1f4182ecce0af008a94597 614 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 287 566 3.7E-70 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RB2992 e842083c2c1f4182ecce0af008a94597 614 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 472 490 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RB2992 e842083c2c1f4182ecce0af008a94597 614 Gene3D G3DSA:1.10.274.10 55 157 7.4E-21 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RB7260 3495407e2b6ec3e8e13e208e21f52bc9 199 Gene3D G3DSA:3.40.50.170 8 196 2.1E-46 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB7260 3495407e2b6ec3e8e13e208e21f52bc9 199 SUPERFAMILY SSF53328 7 195 3.4E-44 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB7260 3495407e2b6ec3e8e13e208e21f52bc9 199 Pfam PF00551 Formyl transferase 8 190 5.9E-40 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB7260 3495407e2b6ec3e8e13e208e21f52bc9 199 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 196 3.3E-45 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 Pfam PF12951 Passenger-associated-transport-repeat 2056 2080 1.8E-6 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 Pfam PF12951 Passenger-associated-transport-repeat 1961 1988 3.2E-5 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 Gene3D G3DSA:3.10.100.10 1368 1502 4.8E-6 T 11-11-2016 IPR016186 C-type lectin-like RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 SUPERFAMILY SSF56436 1383 1504 2.08E-6 T 11-11-2016 IPR016187 C-type lectin fold RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 Gene3D G3DSA:2.160.20.10 84 222 1.1E-13 T 11-11-2016 IPR012334 Pectin lyase fold RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 Gene3D G3DSA:2.160.20.10 315 363 1.1E-13 T 11-11-2016 IPR012334 Pectin lyase fold RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1960 1988 3.7E-8 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2055 2080 2.4E-8 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 83 157 7.7E-20 T 11-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 SMART SM00912 49 162 2.1E-32 T 11-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 SUPERFAMILY SSF51126 47 317 9.57E-35 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB3527 51eb68ee9574c646696a7ac56b990cc3 4254 Pfam PF05860 haemagglutination activity domain 69 159 2.9E-19 T 11-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 372 392 6.7E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 355 372 6.7E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 47 60 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 236 245 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 Pfam PF00158 Sigma-54 interaction domain 23 190 8.5E-67 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 SUPERFAMILY SSF52540 22 265 3.38E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 SMART SM00382 43 179 1.5E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 Gene3D G3DSA:3.40.50.300 22 195 1.5E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 Gene3D G3DSA:1.10.8.60 196 272 2.9E-24 T 11-11-2016 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 SUPERFAMILY SSF46689 339 392 1.3E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 SUPERFAMILY SSF46689 236 279 1.3E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 109 124 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 Pfam PF02954 Bacterial regulatory protein, Fis family 349 389 1.4E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11947 1f7d23a0a4c52ec5871d10b8b6df41ef 395 Gene3D G3DSA:1.10.10.60 338 392 9.8E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB720 ec7ed07a4f394d7b09d9efa9c1f72271 446 SUPERFAMILY SSF53649 34 441 5.38E-94 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB720 ec7ed07a4f394d7b09d9efa9c1f72271 446 Gene3D G3DSA:3.30.1120.10 387 443 1.9E-9 T 11-11-2016 RB720 ec7ed07a4f394d7b09d9efa9c1f72271 446 Gene3D G3DSA:3.40.720.10 33 353 1.5E-74 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB720 ec7ed07a4f394d7b09d9efa9c1f72271 446 Pfam PF00884 Sulfatase 36 341 2.2E-51 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB6386 5decd1157a5711f80c4a1dd5c498ee71 380 Pfam PF01261 Xylose isomerase-like TIM barrel 118 315 3.3E-21 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB6386 5decd1157a5711f80c4a1dd5c498ee71 380 Gene3D G3DSA:3.20.20.150 97 376 6.0E-52 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB6386 5decd1157a5711f80c4a1dd5c498ee71 380 SUPERFAMILY SSF51658 92 378 5.74E-38 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB7388 50ab41ccf396c8e972b2ff79db37e3c1 282 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 3 73 1.7E-8 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB7388 50ab41ccf396c8e972b2ff79db37e3c1 282 Pfam PF00589 Phage integrase family 99 257 2.8E-31 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB7388 50ab41ccf396c8e972b2ff79db37e3c1 282 Gene3D G3DSA:1.10.443.10 93 258 4.8E-39 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB7388 50ab41ccf396c8e972b2ff79db37e3c1 282 SUPERFAMILY SSF56349 4 259 2.71E-45 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB6166 50ab41ccf396c8e972b2ff79db37e3c1 282 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 3 73 1.7E-8 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB6166 50ab41ccf396c8e972b2ff79db37e3c1 282 Pfam PF00589 Phage integrase family 99 257 2.8E-31 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB6166 50ab41ccf396c8e972b2ff79db37e3c1 282 Gene3D G3DSA:1.10.443.10 93 258 4.8E-39 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB6166 50ab41ccf396c8e972b2ff79db37e3c1 282 SUPERFAMILY SSF56349 4 259 2.71E-45 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB8597 e2327805fc3db1470537838039d2ddca 483 Gene3D G3DSA:3.30.1120.10 399 478 6.6E-17 T 11-11-2016 RB8597 e2327805fc3db1470537838039d2ddca 483 Gene3D G3DSA:3.40.720.10 68 390 6.4E-70 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8597 e2327805fc3db1470537838039d2ddca 483 Pfam PF00884 Sulfatase 70 377 4.2E-43 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB8597 e2327805fc3db1470537838039d2ddca 483 SUPERFAMILY SSF53649 69 478 2.47E-95 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6302 f95f8e5f83e550f3c2990d61bd234fdd 171 Pfam PF00293 NUDIX domain 38 146 9.2E-12 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RB6302 f95f8e5f83e550f3c2990d61bd234fdd 171 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RB6302 f95f8e5f83e550f3c2990d61bd234fdd 171 Gene3D G3DSA:3.90.79.10 21 167 1.6E-43 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB6302 f95f8e5f83e550f3c2990d61bd234fdd 171 SUPERFAMILY SSF55811 10 169 7.72E-40 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB1828 0058e9941be09fead306e143e6401aaa 611 SUPERFAMILY SSF56300 150 295 3.8E-16 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB1828 0058e9941be09fead306e143e6401aaa 611 SUPERFAMILY SSF56300 329 435 3.8E-16 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB1828 0058e9941be09fead306e143e6401aaa 611 Gene3D G3DSA:3.60.21.10 160 350 1.9E-4 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 PRINTS PR01415 Ankyrin repeat signature 122 136 9.9E-6 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 PRINTS PR01415 Ankyrin repeat signature 74 89 9.9E-6 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 Gene3D G3DSA:1.25.40.20 46 120 2.3E-17 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 Gene3D G3DSA:1.25.40.20 186 224 1.8E-12 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 Gene3D G3DSA:1.25.40.20 121 185 2.8E-24 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 Pfam PF12796 Ankyrin repeats (3 copies) 144 235 3.2E-15 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 Pfam PF12796 Ankyrin repeats (3 copies) 47 135 1.8E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 Gene3D G3DSA:1.25.40.20 225 326 1.7E-13 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 346 375 0.21 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 73 102 7.7E-5 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 425 454 500.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 139 168 0.004 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 172 201 0.0012 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 281 331 1400.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 106 135 5.8E-4 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 249 278 0.028 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 206 235 0.1 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SMART SM00248 379 421 1700.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SUPERFAMILY SSF48403 408 469 5.22E-8 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 SUPERFAMILY SSF48403 48 395 1.79E-55 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB601 decdb46be2d3f6e4ae1b2c7be119bb48 496 Gene3D G3DSA:1.25.40.20 327 469 1.9E-21 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB12155 f7a67d6a6edce32ea827c6c668462ef5 1063 Pfam PF07583 Protein of unknown function (DUF1549) 158 364 5.8E-82 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB12155 f7a67d6a6edce32ea827c6c668462ef5 1063 Pfam PF07635 Planctomycete cytochrome C 52 107 1.4E-18 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB12155 f7a67d6a6edce32ea827c6c668462ef5 1063 Pfam PF07587 Protein of unknown function (DUF1553) 749 1006 6.0E-92 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB11167 24feeccfab7d31fedf7cef1e98928c2e 178 SUPERFAMILY SSF48695 35 171 2.1E-20 T 11-11-2016 IPR011031 Multihaem cytochrome RB11167 24feeccfab7d31fedf7cef1e98928c2e 178 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 27 121 2.7E-12 T 11-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal RB11167 24feeccfab7d31fedf7cef1e98928c2e 178 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 31 166 5.1E-50 T 11-11-2016 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 RB11167 24feeccfab7d31fedf7cef1e98928c2e 178 Gene3D G3DSA:1.10.3820.10 23 170 1.1E-22 T 11-11-2016 RB7367 856e205312f80138fe2a436d4ed94584 635 Pfam PF13180 PDZ domain 261 336 1.6E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7367 856e205312f80138fe2a436d4ed94584 635 SUPERFAMILY SSF50494 56 255 5.1E-45 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB7367 856e205312f80138fe2a436d4ed94584 635 SUPERFAMILY SSF50156 244 341 7.62E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7367 856e205312f80138fe2a436d4ed94584 635 Gene3D G3DSA:2.40.10.10 74 149 8.6E-19 T 11-11-2016 RB7367 856e205312f80138fe2a436d4ed94584 635 Gene3D G3DSA:2.30.42.10 264 344 2.3E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7367 856e205312f80138fe2a436d4ed94584 635 PRINTS PR00834 HtrA/DegQ protease family signature 148 172 5.9E-28 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7367 856e205312f80138fe2a436d4ed94584 635 PRINTS PR00834 HtrA/DegQ protease family signature 107 127 5.9E-28 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7367 856e205312f80138fe2a436d4ed94584 635 PRINTS PR00834 HtrA/DegQ protease family signature 85 97 5.9E-28 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7367 856e205312f80138fe2a436d4ed94584 635 PRINTS PR00834 HtrA/DegQ protease family signature 289 301 5.9E-28 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7367 856e205312f80138fe2a436d4ed94584 635 PRINTS PR00834 HtrA/DegQ protease family signature 190 207 5.9E-28 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7367 856e205312f80138fe2a436d4ed94584 635 Gene3D G3DSA:2.40.10.10 150 263 2.7E-29 T 11-11-2016 RB7367 856e205312f80138fe2a436d4ed94584 635 SMART SM00228 260 331 3.1E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7367 856e205312f80138fe2a436d4ed94584 635 Pfam PF13365 Trypsin-like peptidase domain 76 219 2.6E-27 T 11-11-2016 RB5968 c36e6caaa9723ce4d3a7b0c493621959 207 SUPERFAMILY SSF88946 7 101 2.67E-7 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5968 c36e6caaa9723ce4d3a7b0c493621959 207 Gene3D G3DSA:1.10.1740.10 7 101 2.7E-9 T 11-11-2016 RB5968 c36e6caaa9723ce4d3a7b0c493621959 207 Pfam PF08281 Sigma-70, region 4 152 204 5.5E-13 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5968 c36e6caaa9723ce4d3a7b0c493621959 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 204 1.2E-21 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5968 c36e6caaa9723ce4d3a7b0c493621959 207 SUPERFAMILY SSF88659 144 205 1.64E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5968 c36e6caaa9723ce4d3a7b0c493621959 207 Gene3D G3DSA:1.10.10.10 149 204 8.7E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB912 ed6d03edbddcdb9a80e7f3f0e550efd6 162 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 1 151 3.6E-42 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB912 ed6d03edbddcdb9a80e7f3f0e550efd6 162 Pfam PF08281 Sigma-70, region 4 97 147 2.1E-7 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB912 ed6d03edbddcdb9a80e7f3f0e550efd6 162 Gene3D G3DSA:1.10.1740.10 4 91 4.0E-17 T 11-11-2016 RB912 ed6d03edbddcdb9a80e7f3f0e550efd6 162 SUPERFAMILY SSF88659 82 155 6.35E-10 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB912 ed6d03edbddcdb9a80e7f3f0e550efd6 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 150 1.7E-27 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB912 ed6d03edbddcdb9a80e7f3f0e550efd6 162 SUPERFAMILY SSF88946 1 78 8.63E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB912 ed6d03edbddcdb9a80e7f3f0e550efd6 162 Pfam PF04542 Sigma-70 region 2 3 68 3.1E-12 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB912 ed6d03edbddcdb9a80e7f3f0e550efd6 162 Gene3D G3DSA:1.10.10.10 92 153 9.8E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11498 a755b85f70f547b4a0780b5cd90df9b5 446 SUPERFAMILY SSF56436 204 445 9.65E-66 T 11-11-2016 IPR016187 C-type lectin fold RB11498 a755b85f70f547b4a0780b5cd90df9b5 446 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 38 445 1.5E-159 T 11-11-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 RB11498 a755b85f70f547b4a0780b5cd90df9b5 446 Pfam PF03781 Sulfatase-modifying factor enzyme 1 203 445 1.3E-29 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB11498 a755b85f70f547b4a0780b5cd90df9b5 446 Gene3D G3DSA:3.90.1580.10 198 445 2.7E-55 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB11498 a755b85f70f547b4a0780b5cd90df9b5 446 Pfam PF12867 DinB superfamily 40 172 2.0E-9 T 11-11-2016 IPR024775 DinB-like domain RB8274 08d1b43e690246d399fcd0443d9a04d9 623 SMART SM00387 504 610 3.6E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8274 08d1b43e690246d399fcd0443d9a04d9 623 Pfam PF00498 FHA domain 24 88 4.5E-17 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 554 1.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 607 1.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 588 1.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 SMART SM00388 394 462 2.0E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 SUPERFAMILY SSF55781 212 393 3.71E-24 T 11-11-2016 IPR029016 GAF domain-like RB8274 08d1b43e690246d399fcd0443d9a04d9 623 SUPERFAMILY SSF47384 390 459 9.22E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 Gene3D G3DSA:3.30.450.40 215 386 3.7E-25 T 11-11-2016 IPR029016 GAF domain-like RB8274 08d1b43e690246d399fcd0443d9a04d9 623 SMART SM00065 221 387 2.1E-15 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 SUPERFAMILY SSF55874 452 610 4.32E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8274 08d1b43e690246d399fcd0443d9a04d9 623 Gene3D G3DSA:2.60.200.20 2 95 3.3E-24 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 Gene3D G3DSA:1.10.287.130 390 458 1.7E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 Gene3D G3DSA:3.30.565.10 468 609 1.9E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8274 08d1b43e690246d399fcd0443d9a04d9 623 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 505 608 1.1E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8274 08d1b43e690246d399fcd0443d9a04d9 623 SUPERFAMILY SSF49879 2 96 4.21E-24 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 SMART SM00240 22 74 2.8E-14 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB8274 08d1b43e690246d399fcd0443d9a04d9 623 Pfam PF13185 GAF domain 220 378 2.0E-13 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 106 577 4.9E-100 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 902 1094 4.8E-53 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 SUPERFAMILY SSF82866 896 1107 1.44E-37 T 11-11-2016 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 SUPERFAMILY SSF82866 386 584 1.96E-40 T 11-11-2016 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 Gene3D G3DSA:1.20.1640.10 897 1108 2.9E-24 T 11-11-2016 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 Gene3D G3DSA:1.20.1640.10 385 584 4.5E-26 T 11-11-2016 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 338 571 3.5E-62 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 PRINTS PR01755 Bacterial translocase SecF protein signature 1011 1029 8.8E-17 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 PRINTS PR01755 Bacterial translocase SecF protein signature 636 651 8.8E-17 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 PRINTS PR01755 Bacterial translocase SecF protein signature 1042 1057 8.8E-17 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 608 1105 25.241 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 79 592 31.281 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 Pfam PF02355 Protein export membrane protein 906 1103 1.3E-54 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 Pfam PF02355 Protein export membrane protein 411 578 4.7E-22 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 Pfam PF07549 SecD/SecF GG Motif 642 657 0.062 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RB4633 5f810346bc20fcc7bef0c40b0128a6b6 1112 Pfam PF07549 SecD/SecF GG Motif 105 122 0.0072 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 SUPERFAMILY SSF56327 144 306 3.6E-45 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 145 306 3.6E-20 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 172 178 - T 11-11-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 Gene3D G3DSA:3.90.110.10 145 306 5.7E-44 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 SUPERFAMILY SSF51735 1 142 1.34E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 Gene3D G3DSA:3.40.50.720 1 144 4.5E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 2.2E-31 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 PRINTS PR00086 L-lactate dehydrogenase signature 28 52 2.2E-31 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 2.2E-31 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 2.2E-31 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 2.2E-31 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 PIRSF PIRSF000102 1 310 1.3E-93 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB2566 3dd2d98468f56ff3ec20d07f683caf6a 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 142 2.1E-35 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RB2893 fdfa71608e2dc4d3db70c6b249decf93 702 Gene3D G3DSA:1.25.40.10 136 377 3.5E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5310 96e0e05bd863145d7e2a844292a3716e 527 Pfam PF07632 Protein of unknown function (DUF1593) 80 347 5.8E-81 T 11-11-2016 IPR011483 Protein of unknown function DUF1593 RB12073 334f7d81624baec81a5542ecfba46c98 302 Gene3D G3DSA:3.20.20.150 57 298 9.1E-66 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12073 334f7d81624baec81a5542ecfba46c98 302 SUPERFAMILY SSF51658 57 298 4.7E-62 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12073 334f7d81624baec81a5542ecfba46c98 302 Pfam PF01261 Xylose isomerase-like TIM barrel 96 252 1.2E-19 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB3727 35aadfe1b9e90247c21255282337347b 355 SUPERFAMILY SSF88659 193 245 1.66E-10 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 Gene3D G3DSA:1.10.601.10 69 192 3.2E-46 T 11-11-2016 RB3727 35aadfe1b9e90247c21255282337347b 355 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 148 161 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 Pfam PF04545 Sigma-70, region 4 293 343 1.3E-18 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 PRINTS PR00046 Major sigma-70 factor signature 172 180 6.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 PRINTS PR00046 Major sigma-70 factor signature 148 161 6.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 PRINTS PR00046 Major sigma-70 factor signature 332 343 6.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 PRINTS PR00046 Major sigma-70 factor signature 317 332 6.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 PRINTS PR00046 Major sigma-70 factor signature 296 308 6.4E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 Gene3D G3DSA:1.10.10.10 291 343 3.1E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3727 35aadfe1b9e90247c21255282337347b 355 Pfam PF00140 Sigma-70 factor, region 1.2 87 117 4.9E-13 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 Gene3D G3DSA:1.10.10.10 194 243 3.3E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3727 35aadfe1b9e90247c21255282337347b 355 Pfam PF04539 Sigma-70 region 3 203 279 7.6E-10 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 317 343 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 Pfam PF04542 Sigma-70 region 2 124 188 1.3E-14 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 SUPERFAMILY SSF88946 85 193 3.53E-39 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 120 345 4.0E-32 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3727 35aadfe1b9e90247c21255282337347b 355 SUPERFAMILY SSF88659 259 347 1.18E-21 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB757 0051620d8bdccd06a2797acc6a77ce67 137 SUPERFAMILY SSF46785 15 133 5.59E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB757 0051620d8bdccd06a2797acc6a77ce67 137 Gene3D G3DSA:1.10.10.10 13 86 5.2E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB757 0051620d8bdccd06a2797acc6a77ce67 137 Pfam PF03965 Penicillinase repressor 17 129 2.7E-30 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB757 0051620d8bdccd06a2797acc6a77ce67 137 PIRSF PIRSF019455 8 137 2.3E-22 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB12885 16fc3d0741605693ff3ab86be96ff786 334 Gene3D G3DSA:3.10.290.10 14 63 1.9E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB12885 16fc3d0741605693ff3ab86be96ff786 334 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB12885 16fc3d0741605693ff3ab86be96ff786 334 SUPERFAMILY SSF55174 14 100 7.74E-10 T 11-11-2016 RB12885 16fc3d0741605693ff3ab86be96ff786 334 Pfam PF00849 RNA pseudouridylate synthase 88 244 3.0E-33 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB12885 16fc3d0741605693ff3ab86be96ff786 334 SUPERFAMILY SSF55120 71 329 2.26E-70 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB12885 16fc3d0741605693ff3ab86be96ff786 334 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 328 1.1E-79 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB12885 16fc3d0741605693ff3ab86be96ff786 334 SMART SM00363 14 78 0.0013 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB9353 047acbce92fb3e4cd22de7604a662307 54 Pfam PF00376 MerR family regulatory protein 10 46 2.4E-10 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RB9353 047acbce92fb3e4cd22de7604a662307 54 SUPERFAMILY SSF46955 7 54 4.12E-11 T 11-11-2016 IPR009061 Putative DNA-binding domain RB9353 047acbce92fb3e4cd22de7604a662307 54 Gene3D G3DSA:1.10.1660.10 6 53 2.9E-9 T 11-11-2016 RB4118 821e585ae571924b05a560a4080fbf6f 147 SUPERFAMILY SSF46785 7 126 6.99E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4118 821e585ae571924b05a560a4080fbf6f 147 PIRSF PIRSF019455 1 135 9.2E-27 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB4118 821e585ae571924b05a560a4080fbf6f 147 Gene3D G3DSA:1.10.10.10 7 78 8.7E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4118 821e585ae571924b05a560a4080fbf6f 147 Pfam PF03965 Penicillinase repressor 9 124 5.7E-31 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB1170 303c74a237d883a6c757e01f6547f76b 417 Gene3D G3DSA:3.40.640.10 50 280 1.9E-84 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB1170 303c74a237d883a6c757e01f6547f76b 417 Gene3D G3DSA:3.90.1150.10 282 411 1.3E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB1170 303c74a237d883a6c757e01f6547f76b 417 PIRSF PIRSF000390 39 413 8.6E-104 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RB1170 303c74a237d883a6c757e01f6547f76b 417 SUPERFAMILY SSF53383 52 410 2.42E-108 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB1170 303c74a237d883a6c757e01f6547f76b 417 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 52 405 1.5E-118 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.7E-26 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 5.1E-26 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 Gene3D G3DSA:1.10.287.180 4 76 1.3E-27 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 30.971 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 Gene3D G3DSA:3.10.50.30 77 157 4.0E-24 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 SUPERFAMILY SSF46557 4 79 8.37E-24 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 156 5.7E-51 T 11-11-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 PIRSF PIRSF006092 1 158 1.2E-53 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 SUPERFAMILY SSF54534 81 157 1.31E-19 T 11-11-2016 RB2780 6cb0de2ad62d6a5d234bf57f4a456d57 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RB8746 78a70c3e92cb33a7cf5a8456b3ec9665 146 Gene3D G3DSA:1.10.3680.10 74 136 5.0E-6 T 11-11-2016 IPR029024 TerB-like RB8746 78a70c3e92cb33a7cf5a8456b3ec9665 146 Gene3D G3DSA:1.10.3680.10 15 73 3.8E-9 T 11-11-2016 IPR029024 TerB-like RB8746 78a70c3e92cb33a7cf5a8456b3ec9665 146 Pfam PF05099 Tellurite resistance protein TerB 27 72 3.9E-6 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal RB8746 78a70c3e92cb33a7cf5a8456b3ec9665 146 SUPERFAMILY SSF158682 26 138 7.85E-19 T 11-11-2016 IPR029024 TerB-like RB1483 eff3d59afc01ca301270d7d0980b7178 267 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 157 256 4.1E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB1483 eff3d59afc01ca301270d7d0980b7178 267 Gene3D G3DSA:3.30.565.10 139 258 8.5E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB1483 eff3d59afc01ca301270d7d0980b7178 267 Gene3D G3DSA:3.30.565.10 92 100 8.5E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB1483 eff3d59afc01ca301270d7d0980b7178 267 SUPERFAMILY SSF55874 121 257 4.32E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB1483 eff3d59afc01ca301270d7d0980b7178 267 PRINTS PR00344 Bacterial sensor protein C-terminal signature 219 237 2.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB1483 eff3d59afc01ca301270d7d0980b7178 267 PRINTS PR00344 Bacterial sensor protein C-terminal signature 185 199 2.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB1483 eff3d59afc01ca301270d7d0980b7178 267 PRINTS PR00344 Bacterial sensor protein C-terminal signature 243 256 2.8E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB1483 eff3d59afc01ca301270d7d0980b7178 267 SMART SM00387 146 259 8.6E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5577 833fa4fa67ceb78e1c28b1e1f4450ded 362 SUPERFAMILY SSF63829 59 355 1.61E-54 T 11-11-2016 RB5577 833fa4fa67ceb78e1c28b1e1f4450ded 362 Gene3D G3DSA:2.120.10.30 72 356 9.9E-57 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB5577 833fa4fa67ceb78e1c28b1e1f4450ded 362 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 74 339 2.7E-41 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RB12652 709a020121c36872e56a2687c2025a25 594 Pfam PF13522 Glutamine amidotransferase domain 39 177 9.0E-20 T 11-11-2016 RB12652 709a020121c36872e56a2687c2025a25 594 Gene3D G3DSA:3.40.50.10490 428 594 1.6E-64 T 11-11-2016 RB12652 709a020121c36872e56a2687c2025a25 594 SUPERFAMILY SSF56235 1 216 6.95E-54 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB12652 709a020121c36872e56a2687c2025a25 594 Gene3D G3DSA:3.60.20.10 1 209 3.8E-59 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB12652 709a020121c36872e56a2687c2025a25 594 Gene3D G3DSA:3.40.50.10490 229 427 5.6E-73 T 11-11-2016 RB12652 709a020121c36872e56a2687c2025a25 594 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 1 594 8.1E-222 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 RB12652 709a020121c36872e56a2687c2025a25 594 Pfam PF01380 SIS domain 447 576 7.7E-31 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RB12652 709a020121c36872e56a2687c2025a25 594 Pfam PF01380 SIS domain 276 401 4.2E-30 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RB12652 709a020121c36872e56a2687c2025a25 594 SUPERFAMILY SSF53697 231 594 2.6E-111 T 11-11-2016 RB7928 a98c4adbdee6fd6c4ad7f1fc6b96e61e 1044 SUPERFAMILY SSF56112 75 388 1.48E-71 T 11-11-2016 IPR011009 Protein kinase-like domain RB7928 a98c4adbdee6fd6c4ad7f1fc6b96e61e 1044 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 197 209 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB7928 a98c4adbdee6fd6c4ad7f1fc6b96e61e 1044 Pfam PF06271 RDD family 357 522 2.4E-23 T 11-11-2016 IPR010432 RDD RB7928 a98c4adbdee6fd6c4ad7f1fc6b96e61e 1044 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 108 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB7928 a98c4adbdee6fd6c4ad7f1fc6b96e61e 1044 SMART SM00220 79 348 1.9E-61 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB7928 a98c4adbdee6fd6c4ad7f1fc6b96e61e 1044 Gene3D G3DSA:3.30.200.20 74 174 1.6E-23 T 11-11-2016 RB7928 a98c4adbdee6fd6c4ad7f1fc6b96e61e 1044 Pfam PF00069 Protein kinase domain 79 338 7.5E-48 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB7928 a98c4adbdee6fd6c4ad7f1fc6b96e61e 1044 Gene3D G3DSA:1.10.510.10 175 344 5.0E-45 T 11-11-2016 RB2839 f7dea8b5ce87ed86a4174caa0e8a7de8 290 SMART SM00316 84 145 22.0 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2839 f7dea8b5ce87ed86a4174caa0e8a7de8 290 SMART SM00316 18 79 2.7E-4 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2839 f7dea8b5ce87ed86a4174caa0e8a7de8 290 SMART SM00316 159 221 13.0 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2839 f7dea8b5ce87ed86a4174caa0e8a7de8 290 Gene3D G3DSA:2.40.50.140 190 222 8.5E-4 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2839 f7dea8b5ce87ed86a4174caa0e8a7de8 290 Gene3D G3DSA:2.40.50.140 17 56 8.5E-4 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2839 f7dea8b5ce87ed86a4174caa0e8a7de8 290 PIRSF PIRSF012524 15 290 1.2E-76 T 11-11-2016 IPR014464 Conserved virulence factor B RB2839 f7dea8b5ce87ed86a4174caa0e8a7de8 290 Pfam PF13509 S1 domain 19 79 2.7E-23 T 11-11-2016 RB2839 f7dea8b5ce87ed86a4174caa0e8a7de8 290 Pfam PF13509 S1 domain 85 144 5.5E-11 T 11-11-2016 RB11037 42a3af41742c4055d64cc44a1401759b 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 478 4.0E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11037 42a3af41742c4055d64cc44a1401759b 493 SMART SM00304 208 265 1.2E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB11037 42a3af41742c4055d64cc44a1401759b 493 Pfam PF00672 HAMP domain 189 261 2.1E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB11037 42a3af41742c4055d64cc44a1401759b 493 SUPERFAMILY SSF158472 209 264 1.96E-5 T 11-11-2016 RB11037 42a3af41742c4055d64cc44a1401759b 493 Gene3D G3DSA:3.30.565.10 341 479 6.3E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11037 42a3af41742c4055d64cc44a1401759b 493 SUPERFAMILY SSF47384 269 331 6.08E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11037 42a3af41742c4055d64cc44a1401759b 493 SUPERFAMILY SSF55874 340 471 3.54E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11037 42a3af41742c4055d64cc44a1401759b 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 4.3E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11037 42a3af41742c4055d64cc44a1401759b 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 445 4.3E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11037 42a3af41742c4055d64cc44a1401759b 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 4.3E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11037 42a3af41742c4055d64cc44a1401759b 493 Gene3D G3DSA:1.10.287.130 269 333 3.3E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11037 42a3af41742c4055d64cc44a1401759b 493 SMART SM00387 382 485 2.6E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5568 d0519a844498990efb4a80c1f34be010 489 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 215 333 3.0E-36 T 11-11-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RB5568 d0519a844498990efb4a80c1f34be010 489 Gene3D G3DSA:1.10.1740.10 407 487 3.5E-27 T 11-11-2016 RB5568 d0519a844498990efb4a80c1f34be010 489 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 58 486 43.063 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RB5568 d0519a844498990efb4a80c1f34be010 489 SUPERFAMILY SSF69055 398 486 6.67E-26 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RB5568 d0519a844498990efb4a80c1f34be010 489 SUPERFAMILY SSF55347 195 368 4.25E-56 T 11-11-2016 RB5568 d0519a844498990efb4a80c1f34be010 489 Pfam PF13288 DXP reductoisomerase C-terminal domain 366 481 2.1E-33 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RB5568 d0519a844498990efb4a80c1f34be010 489 SUPERFAMILY SSF51735 57 219 2.28E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5568 d0519a844498990efb4a80c1f34be010 489 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 58 201 1.6E-38 T 11-11-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RB5568 d0519a844498990efb4a80c1f34be010 489 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 57 485 4.3E-123 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 RB5568 d0519a844498990efb4a80c1f34be010 489 Gene3D G3DSA:3.40.50.720 54 219 1.7E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8233 9b6373814cc7aa8073f307ba474c7e1e 351 Gene3D G3DSA:3.40.50.1400 160 288 4.0E-45 T 11-11-2016 RB8233 9b6373814cc7aa8073f307ba474c7e1e 351 Pfam PF00762 Ferrochelatase 9 308 1.0E-91 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RB8233 9b6373814cc7aa8073f307ba474c7e1e 351 SUPERFAMILY SSF53800 7 338 3.43E-80 T 11-11-2016 RB8233 9b6373814cc7aa8073f307ba474c7e1e 351 Hamap MF_00323 Ferrochelatase [hemH]. 6 309 28.878 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RB8233 9b6373814cc7aa8073f307ba474c7e1e 351 TIGRFAM TIGR00109 hemH: ferrochelatase 11 309 2.2E-42 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RB8233 9b6373814cc7aa8073f307ba474c7e1e 351 Gene3D G3DSA:3.40.50.1400 6 159 6.2E-38 T 11-11-2016 RB11123 a1dc9eab822e8a2a033665510effadc6 491 Pfam PF00884 Sulfatase 36 383 2.6E-67 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB11123 a1dc9eab822e8a2a033665510effadc6 491 SUPERFAMILY SSF53649 34 475 1.35E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB11123 a1dc9eab822e8a2a033665510effadc6 491 Gene3D G3DSA:3.40.720.10 34 420 3.6E-108 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB11123 a1dc9eab822e8a2a033665510effadc6 491 Gene3D G3DSA:3.30.1120.10 421 478 1.3E-19 T 11-11-2016 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 SMART SM00482 779 992 1.4E-97 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 SMART SM00474 427 612 4.1E-35 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 SUPERFAMILY SSF88723 128 291 1.46E-48 T 11-11-2016 IPR029060 PIN domain-like RB12799 5b08c73cf3abddc21475ceca64d64383 1027 SUPERFAMILY SSF47807 292 405 2.39E-25 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 SUPERFAMILY SSF53098 430 613 1.66E-46 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Pfam PF01612 3'-5' exonuclease 427 611 1.7E-35 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Pfam PF00476 DNA polymerase family A 645 1026 4.4E-145 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 TIGRFAM TIGR00593 pola: DNA polymerase I 131 1026 6.8E-284 T 11-11-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 837 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 771 786 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 748 770 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 945 961 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 817 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 885 896 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 873 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 907 918 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 PRINTS PR00868 DNA-polymerase family A (pol I) signature 975 988 2.1E-71 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 SMART SM00475 127 383 8.0E-104 T 11-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 SUPERFAMILY SSF56672 617 1027 1.56E-143 T 11-11-2016 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Gene3D G3DSA:1.10.150.20 303 365 3.0E-24 T 11-11-2016 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Gene3D G3DSA:1.10.150.20 806 911 1.3E-30 T 11-11-2016 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Gene3D G3DSA:3.40.50.1010 130 302 2.4E-60 T 11-11-2016 IPR029060 PIN domain-like RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 130 286 2.2E-48 T 11-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Gene3D G3DSA:3.30.70.370 757 805 2.7E-63 T 11-11-2016 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Gene3D G3DSA:3.30.70.370 912 1027 2.7E-63 T 11-11-2016 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Gene3D G3DSA:1.20.1060.10 637 756 7.3E-37 T 11-11-2016 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 292 382 7.7E-26 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 ProSitePatterns PS00447 DNA polymerase family A signature. 848 867 - T 11-11-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 Gene3D G3DSA:3.30.420.10 426 635 2.2E-71 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12799 5b08c73cf3abddc21475ceca64d64383 1027 SMART SM00279 294 329 1.9E-9 T 11-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RB9212 595bb1f0f9b3b727f39dd2bef61c9c5e 413 SUPERFAMILY SSF56219 129 301 4.32E-7 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB9212 595bb1f0f9b3b727f39dd2bef61c9c5e 413 SMART SM00476 110 383 0.005 T 11-11-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 RB9212 595bb1f0f9b3b727f39dd2bef61c9c5e 413 PRINTS PR00130 DNase I signature 140 169 3.2E-5 T 11-11-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 RB9212 595bb1f0f9b3b727f39dd2bef61c9c5e 413 PRINTS PR00130 DNase I signature 360 380 3.2E-5 T 11-11-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 RB9212 595bb1f0f9b3b727f39dd2bef61c9c5e 413 Gene3D G3DSA:3.60.10.10 130 382 2.0E-35 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB10049 95fea25ca872610b5a2f2150e9073caf 217 Pfam PF08281 Sigma-70, region 4 131 183 5.2E-10 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10049 95fea25ca872610b5a2f2150e9073caf 217 Gene3D G3DSA:1.10.10.10 127 188 2.3E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10049 95fea25ca872610b5a2f2150e9073caf 217 SUPERFAMILY SSF88946 26 112 1.57E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10049 95fea25ca872610b5a2f2150e9073caf 217 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 185 5.4E-22 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10049 95fea25ca872610b5a2f2150e9073caf 217 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 26 187 2.2E-52 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB10049 95fea25ca872610b5a2f2150e9073caf 217 Gene3D G3DSA:1.10.1740.10 26 124 5.1E-17 T 11-11-2016 RB10049 95fea25ca872610b5a2f2150e9073caf 217 Pfam PF04542 Sigma-70 region 2 31 95 2.7E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10049 95fea25ca872610b5a2f2150e9073caf 217 SUPERFAMILY SSF88659 134 189 2.43E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10192 44e801765aed6335d5b3239d6c6f5599 470 Pfam PF01979 Amidohydrolase family 68 433 8.0E-22 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB10192 44e801765aed6335d5b3239d6c6f5599 470 Gene3D G3DSA:3.20.20.140 87 419 9.4E-99 T 11-11-2016 RB10192 44e801765aed6335d5b3239d6c6f5599 470 SUPERFAMILY SSF51556 72 380 6.81E-88 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB10192 44e801765aed6335d5b3239d6c6f5599 470 Gene3D G3DSA:2.30.40.10 13 86 1.1E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB10192 44e801765aed6335d5b3239d6c6f5599 470 ProSitePatterns PS00483 Dihydroorotase signature 2. 315 326 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RB10192 44e801765aed6335d5b3239d6c6f5599 470 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 39 433 5.9E-94 T 11-11-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 RB10192 44e801765aed6335d5b3239d6c6f5599 470 SUPERFAMILY SSF51338 379 435 5.64E-24 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB10192 44e801765aed6335d5b3239d6c6f5599 470 SUPERFAMILY SSF51338 11 71 5.64E-24 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB6470 013e6bb0a6d00bf37911fe21c655dda1 701 Pfam PF12679 ABC-2 family transporter protein 12 394 2.6E-22 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 RB6470 013e6bb0a6d00bf37911fe21c655dda1 701 Pfam PF02517 CAAX protease self-immunity 549 642 4.1E-17 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 RB1903 e5ca367abe5175b0a0dc803009b043a2 480 Gene3D G3DSA:3.90.10.10 4 8 2.2E-9 T 11-11-2016 RB1903 e5ca367abe5175b0a0dc803009b043a2 480 Gene3D G3DSA:3.90.10.10 65 181 2.2E-9 T 11-11-2016 RB1903 e5ca367abe5175b0a0dc803009b043a2 480 Gene3D G3DSA:1.10.780.10 240 359 2.0E-13 T 11-11-2016 RB1903 e5ca367abe5175b0a0dc803009b043a2 480 Gene3D G3DSA:1.10.780.10 384 439 4.7E-5 T 11-11-2016 RB1903 e5ca367abe5175b0a0dc803009b043a2 480 SUPERFAMILY SSF48695 254 462 3.35E-37 T 11-11-2016 IPR011031 Multihaem cytochrome RB1903 e5ca367abe5175b0a0dc803009b043a2 480 SUPERFAMILY SSF48695 72 192 3.35E-37 T 11-11-2016 IPR011031 Multihaem cytochrome RB1903 e5ca367abe5175b0a0dc803009b043a2 480 Pfam PF14537 Cytochrome c3 65 153 9.0E-8 T 11-11-2016 RB1903 e5ca367abe5175b0a0dc803009b043a2 480 Pfam PF14537 Cytochrome c3 247 356 3.9E-8 T 11-11-2016 RB6135 fb04e5e07e73b1ca828db860a71fc380 172 PIRSF PIRSF001338 11 172 2.9E-71 T 11-11-2016 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 RB6135 fb04e5e07e73b1ca828db860a71fc380 172 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 16 169 32.939 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB6135 fb04e5e07e73b1ca828db860a71fc380 172 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 16 168 8.2E-64 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB6135 fb04e5e07e73b1ca828db860a71fc380 172 SUPERFAMILY SSF52255 15 168 2.09E-64 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB6135 fb04e5e07e73b1ca828db860a71fc380 172 Pfam PF00731 AIR carboxylase 15 163 2.8E-64 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB6135 fb04e5e07e73b1ca828db860a71fc380 172 Gene3D G3DSA:3.40.50.7700 12 169 5.9E-73 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB6135 fb04e5e07e73b1ca828db860a71fc380 172 SMART SM01001 14 165 1.0E-99 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB3732 d56ca0371abe3f6ea4b83170d3a0bbbd 414 Pfam PF02687 FtsX-like permease family 299 410 6.7E-11 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB3732 d56ca0371abe3f6ea4b83170d3a0bbbd 414 PIRSF PIRSF031773 14 414 4.3E-147 T 11-11-2016 IPR005891 DevC protein RB8189 f646916b6c700712ea2d804abae8b7e0 931 Pfam PF00270 DEAD/DEAH box helicase 328 494 8.1E-49 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB8189 f646916b6c700712ea2d804abae8b7e0 931 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 299 863 43.346 T 11-11-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 RB8189 f646916b6c700712ea2d804abae8b7e0 931 SMART SM00487 323 521 2.7E-64 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB8189 f646916b6c700712ea2d804abae8b7e0 931 Gene3D G3DSA:3.40.50.300 506 671 1.2E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8189 f646916b6c700712ea2d804abae8b7e0 931 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 452 460 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RB8189 f646916b6c700712ea2d804abae8b7e0 931 Gene3D G3DSA:3.40.50.300 287 505 7.6E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8189 f646916b6c700712ea2d804abae8b7e0 931 SMART SM00490 557 638 9.2E-33 T 11-11-2016 IPR001650 Helicase, C-terminal RB8189 f646916b6c700712ea2d804abae8b7e0 931 SUPERFAMILY SSF52540 372 659 1.31E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8189 f646916b6c700712ea2d804abae8b7e0 931 Pfam PF00271 Helicase conserved C-terminal domain 529 638 1.6E-30 T 11-11-2016 IPR001650 Helicase, C-terminal RB8189 f646916b6c700712ea2d804abae8b7e0 931 Pfam PF03880 DbpA RNA binding domain 791 861 5.5E-21 T 11-11-2016 IPR005580 DbpA, RNA-binding domain RB12567 0e2327b7820918ff9bf90ea1c2ecd810 941 Pfam PF07583 Protein of unknown function (DUF1549) 204 404 2.4E-69 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB12567 0e2327b7820918ff9bf90ea1c2ecd810 941 Pfam PF07635 Planctomycete cytochrome C 87 145 3.7E-13 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB12567 0e2327b7820918ff9bf90ea1c2ecd810 941 Pfam PF07587 Protein of unknown function (DUF1553) 645 889 2.0E-80 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB12567 0e2327b7820918ff9bf90ea1c2ecd810 941 SUPERFAMILY SSF46626 57 164 1.56E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12567 0e2327b7820918ff9bf90ea1c2ecd810 941 Gene3D G3DSA:1.10.760.10 70 163 4.7E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7943 9371f263c9fa5833808ae8ae913ab9c3 303 Gene3D G3DSA:3.40.50.620 244 253 1.7E-56 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB7943 9371f263c9fa5833808ae8ae913ab9c3 303 Gene3D G3DSA:3.40.50.620 3 210 1.7E-56 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB7943 9371f263c9fa5833808ae8ae913ab9c3 303 SUPERFAMILY SSF52402 3 209 1.15E-67 T 11-11-2016 RB7943 9371f263c9fa5833808ae8ae913ab9c3 303 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 303 7.0E-144 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RB7943 9371f263c9fa5833808ae8ae913ab9c3 303 PIRSF PIRSF002936 1 303 6.5E-147 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RB7943 9371f263c9fa5833808ae8ae913ab9c3 303 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 256 7.9E-55 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 Gene3D G3DSA:3.10.430.100 80 165 1.9E-23 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 SUPERFAMILY SSF55658 20 74 4.01E-15 T 11-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 Pfam PF03948 Ribosomal protein L9, C-terminal domain 85 164 2.7E-23 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 Gene3D G3DSA:3.40.5.10 21 70 1.5E-18 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 TIGRFAM TIGR00158 L9: ribosomal protein bL9 22 165 6.3E-36 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 20 166 22.04 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 Pfam PF01281 Ribosomal protein L9, N-terminal domain 21 63 1.9E-16 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 ProSitePatterns PS00651 Ribosomal protein L9 signature. 32 59 - T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB9916 d3ed20c453c75d5d44b308ce9259cd70 177 SUPERFAMILY SSF55653 78 165 4.19E-22 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal RB8363 40446d80b38c4425d78403a347b87bd2 401 Gene3D G3DSA:3.40.630.10 319 398 1.3E-58 T 11-11-2016 RB8363 40446d80b38c4425d78403a347b87bd2 401 Gene3D G3DSA:3.40.630.10 6 196 1.3E-58 T 11-11-2016 RB8363 40446d80b38c4425d78403a347b87bd2 401 Pfam PF07687 Peptidase dimerisation domain 200 296 6.0E-17 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB8363 40446d80b38c4425d78403a347b87bd2 401 Pfam PF01546 Peptidase family M20/M25/M40 81 398 8.5E-15 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RB8363 40446d80b38c4425d78403a347b87bd2 401 Gene3D G3DSA:3.30.70.360 198 297 1.5E-23 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB8363 40446d80b38c4425d78403a347b87bd2 401 SUPERFAMILY SSF53187 9 208 7.86E-45 T 11-11-2016 RB8363 40446d80b38c4425d78403a347b87bd2 401 SUPERFAMILY SSF53187 316 399 7.86E-45 T 11-11-2016 RB8363 40446d80b38c4425d78403a347b87bd2 401 SUPERFAMILY SSF55031 198 297 1.13E-18 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB10039 2f7a75afbab9796ac854999a01b79d70 465 Pfam PF14559 Tetratricopeptide repeat 89 147 5.2E-6 T 11-11-2016 RB10039 2f7a75afbab9796ac854999a01b79d70 465 SMART SM00028 306 339 5.4E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10039 2f7a75afbab9796ac854999a01b79d70 465 SMART SM00028 113 146 160.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10039 2f7a75afbab9796ac854999a01b79d70 465 Gene3D G3DSA:1.25.40.10 299 429 1.0E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10039 2f7a75afbab9796ac854999a01b79d70 465 Pfam PF13181 Tetratricopeptide repeat 306 337 0.0039 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10039 2f7a75afbab9796ac854999a01b79d70 465 SUPERFAMILY SSF48452 283 369 2.92E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10039 2f7a75afbab9796ac854999a01b79d70 465 Pfam PF13432 Tetratricopeptide repeat 162 197 0.0039 T 11-11-2016 RB10039 2f7a75afbab9796ac854999a01b79d70 465 SUPERFAMILY SSF48452 80 201 1.33E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10039 2f7a75afbab9796ac854999a01b79d70 465 Gene3D G3DSA:1.25.40.10 84 209 6.0E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11518 c98db9a9786684bc019c0feecf1e3412 249 SUPERFAMILY SSF48371 18 238 2.07E-39 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB11518 c98db9a9786684bc019c0feecf1e3412 249 Gene3D G3DSA:1.25.40.290 149 240 1.4E-24 T 11-11-2016 RB11518 c98db9a9786684bc019c0feecf1e3412 249 Pfam PF08713 DNA alkylation repair enzyme 15 238 6.6E-68 T 11-11-2016 IPR014825 DNA alkylation repair enzyme RB9600 d36bc90dae73082fd6bff3d2dc0237ce 569 SUPERFAMILY SSF89260 140 237 4.84E-6 T 11-11-2016 RB9600 d36bc90dae73082fd6bff3d2dc0237ce 569 Gene3D G3DSA:2.60.120.380 139 217 1.0E-8 T 11-11-2016 RB5630 c684ca899d7563f2b438825ff2baa4ea 282 Pfam PF13614 AAA domain 1 176 1.3E-51 T 11-11-2016 IPR025669 AAA domain RB5630 c684ca899d7563f2b438825ff2baa4ea 282 SUPERFAMILY SSF52540 1 263 7.59E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5630 c684ca899d7563f2b438825ff2baa4ea 282 Gene3D G3DSA:3.40.50.300 3 265 1.3E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4322 191c9283096bb14b928fe9504aace46a 457 SUPERFAMILY SSF53098 128 373 5.08E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB10608 191c9283096bb14b928fe9504aace46a 457 SUPERFAMILY SSF53098 128 373 5.08E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB5348 191c9283096bb14b928fe9504aace46a 457 SUPERFAMILY SSF53098 128 373 5.08E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB4306 191c9283096bb14b928fe9504aace46a 457 SUPERFAMILY SSF53098 128 373 5.08E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB8777 167f27c71b5360cda7048c5986a162c6 444 Pfam PF07497 Rho termination factor, RNA-binding domain 74 146 8.2E-13 T 11-11-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RB8777 167f27c71b5360cda7048c5986a162c6 444 SMART SM00382 188 386 3.5E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain RB8777 167f27c71b5360cda7048c5986a162c6 444 Gene3D G3DSA:3.40.50.300 153 436 6.0E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8777 167f27c71b5360cda7048c5986a162c6 444 SUPERFAMILY SSF52540 140 393 4.59E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8777 167f27c71b5360cda7048c5986a162c6 444 SUPERFAMILY SSF50249 74 146 4.03E-12 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8777 167f27c71b5360cda7048c5986a162c6 444 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 178 385 1.1E-20 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB8777 167f27c71b5360cda7048c5986a162c6 444 Hamap MF_01884 Transcription termination factor Rho [rho]. 74 441 139.781 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RB8777 167f27c71b5360cda7048c5986a162c6 444 Gene3D G3DSA:2.40.50.140 73 140 5.0E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF00550 Phosphopantetheine attachment site 2007 2070 1.3E-7 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF00550 Phosphopantetheine attachment site 1896 1962 1.8E-5 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF53901 427 563 3.01E-34 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF53901 602 732 3.01E-34 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.50.720 22 314 1.1E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 429 724 9.0E-31 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 915 1205 1.0E-34 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:1.10.1200.10 2001 2076 2.9E-11 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:1.10.1200.10 1895 1962 3.5E-7 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.366.10 1640 1747 5.5E-39 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.366.10 1445 1571 5.5E-39 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF51735 22 310 2.48E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 854 910 2.1E-7 T 11-11-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.30.70.250 1586 1636 2.5E-4 T 11-11-2016 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF51735 2353 2396 1.98E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF51735 2435 2639 1.98E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SMART SM00825 Beta-ketoacyl synthase 428 902 2.0E-46 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF53901 697 901 1.77E-51 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.50.720 2353 2402 5.1E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.50.720 2438 2608 5.1E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1452 1747 2.4E-23 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF47336 2001 2081 2.49E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 733 847 8.3E-32 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF00698 Acyl transferase domain 1451 1733 1.7E-27 T 11-11-2016 IPR014043 Acyl transferase RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF08659 KR domain 2355 2576 6.7E-30 T 11-11-2016 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF52151 1448 1577 1.6E-41 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF52151 1642 1733 1.6E-41 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.47.10 738 901 8.6E-45 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.47.10 429 563 1.5E-37 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.47.10 917 1216 5.1E-40 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Gene3D G3DSA:3.40.47.10 599 737 1.5E-37 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF53901 1094 1209 1.45E-37 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF53901 915 1062 1.45E-37 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF14765 Polyketide synthase dehydratase 2661 2936 9.3E-25 T 11-11-2016 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2355 2578 1.3E-16 T 11-11-2016 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 Pfam PF07993 Male sterility protein 23 271 4.5E-57 T 11-11-2016 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF47336 1892 1962 1.83E-8 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB10446 4bbaaecaa381f4ed272700b1e1c83489 2941 SUPERFAMILY SSF55048 1577 1640 5.49E-5 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 Gene3D G3DSA:3.30.930.10 197 458 1.3E-139 T 11-11-2016 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 Gene3D G3DSA:3.30.930.10 25 120 1.3E-139 T 11-11-2016 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 20 555 46.399 T 11-11-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 SUPERFAMILY SSF52954 450 555 9.32E-33 T 11-11-2016 IPR004154 Anticodon-binding RB10547 10c03c86d67deb26a2a45899d52d88f4 558 PRINTS PR01043 Glycyl-tRNA synthetase signature 42 56 1.3E-55 T 11-11-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 PRINTS PR01043 Glycyl-tRNA synthetase signature 414 426 1.3E-55 T 11-11-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 PRINTS PR01043 Glycyl-tRNA synthetase signature 500 519 1.3E-55 T 11-11-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 PRINTS PR01043 Glycyl-tRNA synthetase signature 210 222 1.3E-55 T 11-11-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 PRINTS PR01043 Glycyl-tRNA synthetase signature 263 280 1.3E-55 T 11-11-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 PRINTS PR01043 Glycyl-tRNA synthetase signature 231 248 1.3E-55 T 11-11-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 PRINTS PR01043 Glycyl-tRNA synthetase signature 280 290 1.3E-55 T 11-11-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 SUPERFAMILY SSF55681 171 466 2.16E-108 T 11-11-2016 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 SUPERFAMILY SSF55681 20 143 2.16E-108 T 11-11-2016 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 Gene3D G3DSA:3.40.50.800 459 554 5.8E-38 T 11-11-2016 IPR004154 Anticodon-binding RB10547 10c03c86d67deb26a2a45899d52d88f4 558 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 22 310 1.1E-81 T 11-11-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 326 4.1E-9 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB10547 10c03c86d67deb26a2a45899d52d88f4 558 Pfam PF03129 Anticodon binding domain 463 552 7.9E-20 T 11-11-2016 IPR004154 Anticodon-binding RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 64 520 2.6E-194 T 11-11-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 Gene3D G3DSA:1.20.210.10 65 529 4.1E-67 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 SUPERFAMILY SSF81442 64 530 2.88E-113 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 573 781 2.3E-64 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 68 499 2.0E-116 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 568 781 2.4E-82 T 11-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 Gene3D G3DSA:1.10.760.10 580 778 2.1E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 259 314 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB6350 7a7d495d75bd9c7e409c80a1e99cc624 832 SUPERFAMILY SSF46626 581 738 2.83E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8240 d6106c06b5764fac3e4836d0d0bc8509 827 Pfam PF14849 YidC periplasmic domain 278 524 3.4E-19 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal RB8240 d6106c06b5764fac3e4836d0d0bc8509 827 Pfam PF13180 PDZ domain 148 226 5.8E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB8240 d6106c06b5764fac3e4836d0d0bc8509 827 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 8 747 13.915 T 11-11-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 RB8240 d6106c06b5764fac3e4836d0d0bc8509 827 SMART SM00228 136 217 8.5E-5 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB8240 d6106c06b5764fac3e4836d0d0bc8509 827 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 536 744 2.1E-52 T 11-11-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RB8240 d6106c06b5764fac3e4836d0d0bc8509 827 Pfam PF02096 60Kd inner membrane protein 537 745 7.8E-45 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RB8240 d6106c06b5764fac3e4836d0d0bc8509 827 SUPERFAMILY SSF50156 152 230 1.84E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB8240 d6106c06b5764fac3e4836d0d0bc8509 827 Gene3D G3DSA:2.30.42.10 149 230 2.8E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB12486 20a24fefc0e781606db2ab92c47e93d3 518 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 203 215 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB12486 20a24fefc0e781606db2ab92c47e93d3 518 Gene3D G3DSA:3.30.200.20 32 192 4.1E-33 T 11-11-2016 RB12486 20a24fefc0e781606db2ab92c47e93d3 518 SUPERFAMILY SSF56112 63 344 7.31E-74 T 11-11-2016 IPR011009 Protein kinase-like domain RB12486 20a24fefc0e781606db2ab92c47e93d3 518 Pfam PF00069 Protein kinase domain 83 343 2.4E-51 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB12486 20a24fefc0e781606db2ab92c47e93d3 518 Gene3D G3DSA:1.10.510.10 193 343 2.3E-38 T 11-11-2016 RB12486 20a24fefc0e781606db2ab92c47e93d3 518 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 89 112 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB12486 20a24fefc0e781606db2ab92c47e93d3 518 SMART SM00220 83 350 3.5E-60 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8328 f80f7b378e5dec8473f671e431422c31 321 Pfam PF01336 OB-fold nucleic acid binding domain 29 89 2.1E-9 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RB8328 f80f7b378e5dec8473f671e431422c31 321 SUPERFAMILY SSF109604 154 290 2.02E-12 T 11-11-2016 RB8328 f80f7b378e5dec8473f671e431422c31 321 Gene3D G3DSA:1.10.3210.10 148 289 5.3E-9 T 11-11-2016 IPR006674 HD domain RB8328 f80f7b378e5dec8473f671e431422c31 321 Pfam PF01966 HD domain 163 286 4.9E-9 T 11-11-2016 IPR006674 HD domain RB8328 f80f7b378e5dec8473f671e431422c31 321 SMART SM00471 158 296 4.7E-10 T 11-11-2016 IPR003607 HD/PDEase domain RB637 960810f05784d883f346ee114d4a4e0b 180 Pfam PF04542 Sigma-70 region 2 17 67 1.0E-4 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB637 960810f05784d883f346ee114d4a4e0b 180 TIGRFAM TIGR02984 Sig-70_plancto1: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 1 175 6.5E-72 T 11-11-2016 IPR014326 RNA polymerase sigma-70 factor, Planctomycetaceae RB637 960810f05784d883f346ee114d4a4e0b 180 Gene3D G3DSA:1.10.1740.10 17 83 5.3E-9 T 11-11-2016 RB637 960810f05784d883f346ee114d4a4e0b 180 SUPERFAMILY SSF88659 91 174 1.83E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB637 960810f05784d883f346ee114d4a4e0b 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 173 4.8E-21 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB637 960810f05784d883f346ee114d4a4e0b 180 SUPERFAMILY SSF88946 17 75 9.42E-8 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB637 960810f05784d883f346ee114d4a4e0b 180 Gene3D G3DSA:1.10.10.10 113 173 2.1E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB637 960810f05784d883f346ee114d4a4e0b 180 Pfam PF04545 Sigma-70, region 4 125 173 2.4E-8 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9766 bd965841e9570bc5f869edc924ac160c 340 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 131 254 3.2E-28 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB9766 bd965841e9570bc5f869edc924ac160c 340 Gene3D G3DSA:3.40.50.300 89 271 2.2E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9766 bd965841e9570bc5f869edc924ac160c 340 SMART SM00382 127 259 1.1E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9766 bd965841e9570bc5f869edc924ac160c 340 SUPERFAMILY SSF52540 87 313 6.95E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 Pfam PF00034 Cytochrome c 180 238 3.7E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 SUPERFAMILY SSF46626 179 248 2.14E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 Gene3D G3DSA:1.10.3820.10 169 188 7.8E-4 T 11-11-2016 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 285 351 8.7E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 69 150 2.8E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 Gene3D G3DSA:1.10.780.10 241 283 5.3E-4 T 11-11-2016 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 SUPERFAMILY SSF46626 69 157 1.4E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 Gene3D G3DSA:1.10.760.10 60 157 9.4E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 SUPERFAMILY SSF46626 263 355 3.9E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 Gene3D G3DSA:1.10.760.10 284 355 9.5E-22 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4408 b7eadc6741f66cbaf67c4d98341424bf 364 Gene3D G3DSA:1.10.760.10 189 240 8.2E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 Gene3D G3DSA:3.30.70.270 63 159 1.7E-27 T 11-11-2016 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 345 6.0E-20 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 SUPERFAMILY SSF56672 2 231 1.33E-85 T 11-11-2016 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 Gene3D G3DSA:3.30.1490.100 238 345 2.1E-29 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 Pfam PF00817 impB/mucB/samB family 5 151 1.0E-47 T 11-11-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 36.979 T 11-11-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 SUPERFAMILY SSF100879 237 336 2.98E-25 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 Pfam PF11798 IMS family HHH motif 164 194 4.0E-7 T 11-11-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RB4224 f7364e7bd8542aa105ee5c4c78f2d6ca 396 Gene3D G3DSA:1.10.150.20 164 231 2.7E-23 T 11-11-2016 RB3157 d7a152edbae48758d65623b84b60c451 450 Gene3D G3DSA:1.10.443.10 222 430 9.4E-47 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB3157 d7a152edbae48758d65623b84b60c451 450 SUPERFAMILY SSF56349 119 429 1.18E-45 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB3157 d7a152edbae48758d65623b84b60c451 450 Pfam PF00589 Phage integrase family 223 422 6.3E-44 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB3157 d7a152edbae48758d65623b84b60c451 450 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 122 205 1.4E-14 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB3157 d7a152edbae48758d65623b84b60c451 450 TIGRFAM TIGR02249 integrase_gron: integron integrase 121 436 1.1E-143 T 11-11-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 RB1680 742473b13c91ab06925b738a353ef829 321 Gene3D G3DSA:2.40.50.100 87 122 2.5E-5 T 11-11-2016 RB1680 742473b13c91ab06925b738a353ef829 321 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 75 290 2.7E-20 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB1680 742473b13c91ab06925b738a353ef829 321 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 303 1.3E-37 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB1680 742473b13c91ab06925b738a353ef829 321 Gene3D G3DSA:2.40.50.100 177 212 4.9E-8 T 11-11-2016 RB1680 742473b13c91ab06925b738a353ef829 321 Gene3D G3DSA:2.40.50.100 69 86 4.9E-8 T 11-11-2016 RB1680 742473b13c91ab06925b738a353ef829 321 SUPERFAMILY SSF111369 59 296 1.7E-18 T 11-11-2016 RB12823 322dedb296f2a796520adfa5ca867c82 242 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 237 1.5E-85 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RB12823 322dedb296f2a796520adfa5ca867c82 242 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 242 97.205 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RB12823 322dedb296f2a796520adfa5ca867c82 242 SUPERFAMILY SSF75217 2 236 5.76E-89 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases RB12823 322dedb296f2a796520adfa5ca867c82 242 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 1.1E-58 T 11-11-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RB12823 322dedb296f2a796520adfa5ca867c82 242 PIRSF PIRSF000386 1 242 1.9E-91 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RB12823 322dedb296f2a796520adfa5ca867c82 242 Gene3D G3DSA:3.40.1280.10 2 161 5.6E-62 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RB12823 322dedb296f2a796520adfa5ca867c82 242 Gene3D G3DSA:1.10.1270.20 162 234 1.8E-26 T 11-11-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RB6542 a5e51549ff8095145d61820e3bd8197b 389 Pfam PF12833 Helix-turn-helix domain 308 382 2.1E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB6542 a5e51549ff8095145d61820e3bd8197b 389 SUPERFAMILY SSF53822 56 293 1.81E-37 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB6542 a5e51549ff8095145d61820e3bd8197b 389 SUPERFAMILY SSF46689 336 385 2.74E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB6542 a5e51549ff8095145d61820e3bd8197b 389 Gene3D G3DSA:1.10.10.60 335 383 8.6E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB6542 a5e51549ff8095145d61820e3bd8197b 389 Gene3D G3DSA:3.40.50.2300 112 274 1.9E-30 T 11-11-2016 RB6542 a5e51549ff8095145d61820e3bd8197b 389 SUPERFAMILY SSF46689 281 329 2.32E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB6542 a5e51549ff8095145d61820e3bd8197b 389 Gene3D G3DSA:3.40.50.2300 56 111 2.7E-9 T 11-11-2016 RB6542 a5e51549ff8095145d61820e3bd8197b 389 Pfam PF13377 Periplasmic binding protein-like domain 110 274 1.8E-28 T 11-11-2016 RB6542 a5e51549ff8095145d61820e3bd8197b 389 SMART SM00342 298 381 3.3E-23 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB6542 a5e51549ff8095145d61820e3bd8197b 389 Gene3D G3DSA:1.10.10.60 281 334 6.1E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Gene3D G3DSA:1.10.1030.10 399 542 4.0E-53 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 SUPERFAMILY SSF48108 395 557 9.42E-52 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 SMART SM00851 964 1050 6.1E-27 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 430 551 1.7E-43 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Gene3D G3DSA:3.30.470.20 750 943 5.9E-71 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Gene3D G3DSA:3.30.470.20 201 398 2.1E-75 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Pfam PF02142 MGS-like domain 967 1050 3.7E-16 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 SMART SM01096 427 551 8.0E-72 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 SUPERFAMILY SSF56059 129 400 2.83E-105 T 11-11-2016 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1062 0.0 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 2.2E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.2E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.2E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.2E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.2E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.2E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.2E-64 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Gene3D G3DSA:3.40.50.20 543 667 6.0E-58 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Gene3D G3DSA:3.40.50.1380 947 1079 1.4E-36 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1075 13.332 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 847 854 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 SUPERFAMILY SSF52335 944 1078 3.66E-32 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 678 884 1.5E-36 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 1.1E-67 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Gene3D G3DSA:3.40.50.20 4 108 6.1E-43 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1071 12.85 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 SUPERFAMILY SSF52440 562 680 1.73E-47 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Gene3D G3DSA:3.30.1490.20 142 200 1.2E-19 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 Gene3D G3DSA:3.30.1490.20 691 749 3.4E-23 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 SUPERFAMILY SSF56059 678 942 2.47E-98 T 11-11-2016 RB12113 b7a7bf2cf5ddff276316129fdd8d548f 1083 SUPERFAMILY SSF52440 2 127 1.14E-46 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB714 a63a3d178c62e04dcbdab91ccf99a75e 896 Pfam PF07587 Protein of unknown function (DUF1553) 590 843 1.7E-94 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB714 a63a3d178c62e04dcbdab91ccf99a75e 896 Pfam PF07635 Planctomycete cytochrome C 78 136 1.9E-18 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB714 a63a3d178c62e04dcbdab91ccf99a75e 896 Pfam PF07583 Protein of unknown function (DUF1549) 187 395 9.2E-81 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB11976 e0fbdbfb9dd27c74da6194a4b36f3880 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 4.1E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RB11976 e0fbdbfb9dd27c74da6194a4b36f3880 237 SUPERFAMILY SSF52172 15 180 2.34E-34 T 11-11-2016 IPR011006 CheY-like superfamily RB11976 e0fbdbfb9dd27c74da6194a4b36f3880 237 Gene3D G3DSA:3.40.50.2300 14 134 1.5E-33 T 11-11-2016 RB11976 e0fbdbfb9dd27c74da6194a4b36f3880 237 SMART SM00448 14 124 3.1E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11976 e0fbdbfb9dd27c74da6194a4b36f3880 237 SMART SM00862 159 235 4.4E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RB11976 e0fbdbfb9dd27c74da6194a4b36f3880 237 Pfam PF00072 Response regulator receiver domain 17 124 1.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11976 e0fbdbfb9dd27c74da6194a4b36f3880 237 Gene3D G3DSA:1.10.10.10 137 236 1.4E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 587 599 - T 11-11-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 146 157 - T 11-11-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 SUPERFAMILY SSF51621 34 937 7.22E-249 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 412 432 7.1E-50 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 145 158 7.1E-50 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 627 656 7.1E-50 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 760 786 7.1E-50 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 198 214 7.1E-50 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 585 605 7.1E-50 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 261 276 7.1E-50 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 Pfam PF00311 Phosphoenolpyruvate carboxylase 141 937 2.6E-206 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RB4944 f0449bef9e4ba4f45d487bd888a2bd14 937 Gene3D G3DSA:1.20.1440.90 291 415 2.3E-9 T 11-11-2016 RB10099 c5fa95e2b5f47cfafc1a00053e1e59a0 326 Pfam PF13633 Prokaryotic N-terminal methylation site 45 70 9.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB10099 c5fa95e2b5f47cfafc1a00053e1e59a0 326 Pfam PF07596 Protein of unknown function (DUF1559) 71 308 1.1E-61 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB10099 c5fa95e2b5f47cfafc1a00053e1e59a0 326 Gene3D G3DSA:3.30.700.10 47 109 1.9E-7 T 11-11-2016 RB10099 c5fa95e2b5f47cfafc1a00053e1e59a0 326 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 44 66 1.9E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB10099 c5fa95e2b5f47cfafc1a00053e1e59a0 326 SUPERFAMILY SSF54523 47 113 3.53E-20 T 11-11-2016 RB4455 aa52292101b8a5edecbc1800a9768100 74 Pfam PF07623 Protein of unknown function (DUF1584) 36 62 5.3E-17 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB3549 919cfeffaea514d28e7c981064a177d7 298 Pfam PF12833 Helix-turn-helix domain 219 296 1.4E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3549 919cfeffaea514d28e7c981064a177d7 298 Gene3D G3DSA:2.60.120.280 46 182 5.8E-11 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB3549 919cfeffaea514d28e7c981064a177d7 298 SMART SM00342 211 295 7.0E-23 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3549 919cfeffaea514d28e7c981064a177d7 298 SUPERFAMILY SSF46689 197 246 2.9E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3549 919cfeffaea514d28e7c981064a177d7 298 SUPERFAMILY SSF46689 248 297 7.47E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3549 919cfeffaea514d28e7c981064a177d7 298 Gene3D G3DSA:1.10.10.60 249 297 5.7E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3549 919cfeffaea514d28e7c981064a177d7 298 Pfam PF02311 AraC-like ligand binding domain 56 152 7.3E-9 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB3549 919cfeffaea514d28e7c981064a177d7 298 SUPERFAMILY SSF51215 38 181 4.32E-13 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB3549 919cfeffaea514d28e7c981064a177d7 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 249 291 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB3549 919cfeffaea514d28e7c981064a177d7 298 Gene3D G3DSA:1.10.10.60 197 248 2.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 SUPERFAMILY SSF50998 48 378 3.48E-44 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 SUPERFAMILY SSF50998 428 502 3.48E-44 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 Pfam PF13570 PQQ-like domain 83 110 6.5E-4 T 11-11-2016 IPR025666 Pyrrolo-quinoline quinone-like domain RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 Pfam PF13360 PQQ-like domain 126 371 1.2E-18 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 SMART SM00564 211 244 110.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 SMART SM00564 96 140 2.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 SMART SM00564 438 465 150.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 SMART SM00564 165 195 35.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 Gene3D G3DSA:2.140.10.10 40 375 4.2E-52 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB11463 2c7f3084b64eb7e28bf66fe1b0a93b32 503 Gene3D G3DSA:2.140.10.10 433 502 4.2E-52 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB9995 d6f888b6a16343e0ecea7d56624af9be 468 SUPERFAMILY SSF101960 36 465 2.22E-139 T 11-11-2016 RB9995 d6f888b6a16343e0ecea7d56624af9be 468 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 459 4.0E-215 T 11-11-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 RB9995 d6f888b6a16343e0ecea7d56624af9be 468 Pfam PF01458 Uncharacterized protein family (UPF0051) 214 439 9.6E-74 T 11-11-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 Hamap MF_01694 Biotin synthase [bioB]. 44 351 41.008 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 SMART SM00729 84 292 7.0E-33 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 Pfam PF04055 Radical SAM superfamily 94 249 3.5E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 PIRSF PIRSF001619 32 356 5.6E-118 T 11-11-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 TIGRFAM TIGR00433 bioB: biotin synthase 57 348 5.4E-118 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 SUPERFAMILY SSF102114 44 349 4.19E-76 T 11-11-2016 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 260 348 9.7E-15 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 SMART SM00876 260 350 3.6E-33 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RB10275 b14ccaad44dcb81301cbc9301d8c39b0 359 Gene3D G3DSA:3.20.20.70 45 350 5.7E-87 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB10297 c7c25d1f4e3bde2a17e529d8cbedf4c9 196 Gene3D G3DSA:3.30.230.60 32 195 8.8E-79 T 11-11-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861 RB10297 c7c25d1f4e3bde2a17e529d8cbedf4c9 196 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 36 193 1.8E-73 T 11-11-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861 RB10297 c7c25d1f4e3bde2a17e529d8cbedf4c9 196 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 34 193 1.1E-83 T 11-11-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861 RB10297 c7c25d1f4e3bde2a17e529d8cbedf4c9 196 SUPERFAMILY SSF54211 32 195 2.81E-71 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB11244 2c727b4167e183d1c647dd651f0e3c63 856 SUPERFAMILY SSF56112 116 377 3.96E-71 T 11-11-2016 IPR011009 Protein kinase-like domain RB11244 2c727b4167e183d1c647dd651f0e3c63 856 SMART SM00220 118 375 1.6E-57 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11244 2c727b4167e183d1c647dd651f0e3c63 856 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 237 249 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB11244 2c727b4167e183d1c647dd651f0e3c63 856 Gene3D G3DSA:3.30.200.20 116 184 2.9E-20 T 11-11-2016 RB11244 2c727b4167e183d1c647dd651f0e3c63 856 Gene3D G3DSA:1.10.510.10 185 377 3.4E-47 T 11-11-2016 RB11244 2c727b4167e183d1c647dd651f0e3c63 856 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 124 147 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB11244 2c727b4167e183d1c647dd651f0e3c63 856 Pfam PF00069 Protein kinase domain 118 366 4.8E-44 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11923 5540fabd5e07a4c754affe03b07c4d9e 231 Gene3D G3DSA:3.40.30.10 73 224 1.1E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11923 5540fabd5e07a4c754affe03b07c4d9e 231 SUPERFAMILY SSF52833 73 222 8.13E-35 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11923 5540fabd5e07a4c754affe03b07c4d9e 231 Pfam PF02630 SCO1/SenC 73 204 3.8E-19 T 11-11-2016 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB13253 efb4ad2bdaef6bf6c26936f1baf4d2f6 204 SUPERFAMILY SSF48498 88 202 2.42E-17 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RB13253 efb4ad2bdaef6bf6c26936f1baf4d2f6 204 SUPERFAMILY SSF46689 8 93 9.75E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB13253 efb4ad2bdaef6bf6c26936f1baf4d2f6 204 Pfam PF16925 Bacterial transcriptional repressor C-terminal 90 187 7.6E-8 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RB13253 efb4ad2bdaef6bf6c26936f1baf4d2f6 204 Gene3D G3DSA:1.10.357.10 67 203 7.9E-17 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RB13253 efb4ad2bdaef6bf6c26936f1baf4d2f6 204 Gene3D G3DSA:1.10.10.60 8 66 1.7E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9262 dfaf45e0d70a2909765451672e086011 496 Gene3D G3DSA:3.40.309.10 300 448 7.7E-8 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB9262 dfaf45e0d70a2909765451672e086011 496 Gene3D G3DSA:3.40.605.10 33 299 2.7E-17 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB9262 dfaf45e0d70a2909765451672e086011 496 Pfam PF00171 Aldehyde dehydrogenase family 38 457 2.8E-18 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB9262 dfaf45e0d70a2909765451672e086011 496 SUPERFAMILY SSF53720 8 473 6.28E-37 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB11379 77296329f6c663d06d8f941b463cd647 720 Pfam PF02384 N-6 DNA Methylase 164 439 3.4E-66 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RB11379 77296329f6c663d06d8f941b463cd647 720 SUPERFAMILY SSF53335 19 59 2.5E-104 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11379 77296329f6c663d06d8f941b463cd647 720 SUPERFAMILY SSF53335 636 717 2.5E-104 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11379 77296329f6c663d06d8f941b463cd647 720 SUPERFAMILY SSF53335 88 443 2.5E-104 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11379 77296329f6c663d06d8f941b463cd647 720 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 325 349 4.3E-16 T 11-11-2016 RB11379 77296329f6c663d06d8f941b463cd647 720 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 187 203 4.3E-16 T 11-11-2016 RB11379 77296329f6c663d06d8f941b463cd647 720 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 284 296 4.3E-16 T 11-11-2016 RB11379 77296329f6c663d06d8f941b463cd647 720 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 210 224 4.3E-16 T 11-11-2016 RB11379 77296329f6c663d06d8f941b463cd647 720 Gene3D G3DSA:3.40.50.150 189 420 2.5E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11379 77296329f6c663d06d8f941b463cd647 720 Pfam PF12161 HsdM N-terminal domain 20 154 7.8E-18 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RB10227 cba4f5c85900dff713edd877df2b7123 446 Gene3D G3DSA:3.30.450.90 50 145 8.2E-13 T 11-11-2016 RB10227 cba4f5c85900dff713edd877df2b7123 446 Pfam PF00437 Type II/IV secretion system protein 53 252 9.8E-6 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB10227 cba4f5c85900dff713edd877df2b7123 446 Gene3D G3DSA:3.40.50.300 152 443 5.7E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10227 cba4f5c85900dff713edd877df2b7123 446 SUPERFAMILY SSF52540 49 336 1.38E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10227 cba4f5c85900dff713edd877df2b7123 446 SUPERFAMILY SSF52540 363 441 1.38E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6488 e74a02dc346f8974304bd22659a7fef6 496 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 338 387 4.5E-6 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RB6488 e74a02dc346f8974304bd22659a7fef6 496 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 218 488 28.929 T 11-11-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RB6488 e74a02dc346f8974304bd22659a7fef6 496 Gene3D G3DSA:3.40.50.720 323 489 7.5E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6488 e74a02dc346f8974304bd22659a7fef6 496 Gene3D G3DSA:3.20.20.70 1 211 3.2E-57 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6488 e74a02dc346f8974304bd22659a7fef6 496 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 220 489 5.9E-71 T 11-11-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RB6488 e74a02dc346f8974304bd22659a7fef6 496 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 223 304 1.3E-24 T 11-11-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RB6488 e74a02dc346f8974304bd22659a7fef6 496 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 1 208 6.8E-43 T 11-11-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RB6488 e74a02dc346f8974304bd22659a7fef6 496 SUPERFAMILY SSF51735 339 488 1.83E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6488 e74a02dc346f8974304bd22659a7fef6 496 SUPERFAMILY SSF53223 209 317 4.14E-29 T 11-11-2016 RB6488 e74a02dc346f8974304bd22659a7fef6 496 Gene3D G3DSA:3.40.192.10 213 322 1.6E-34 T 11-11-2016 RB6488 e74a02dc346f8974304bd22659a7fef6 496 Pfam PF01487 Type I 3-dehydroquinase 3 209 6.3E-56 T 11-11-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RB6488 e74a02dc346f8974304bd22659a7fef6 496 SUPERFAMILY SSF51569 1 211 2.49E-57 T 11-11-2016 RB6488 e74a02dc346f8974304bd22659a7fef6 496 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 1 212 29.794 T 11-11-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RB11482 54d5aa9543c9be86f7abfd4ce8ca7dbb 454 Pfam PF00753 Metallo-beta-lactamase superfamily 56 271 1.3E-23 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11482 54d5aa9543c9be86f7abfd4ce8ca7dbb 454 Gene3D G3DSA:3.60.15.10 181 301 1.2E-50 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11482 54d5aa9543c9be86f7abfd4ce8ca7dbb 454 Gene3D G3DSA:3.60.15.10 35 148 1.2E-50 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11482 54d5aa9543c9be86f7abfd4ce8ca7dbb 454 SUPERFAMILY SSF56281 8 448 4.6E-108 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11482 54d5aa9543c9be86f7abfd4ce8ca7dbb 454 Pfam PF14863 Alkyl sulfatase dimerisation 309 446 2.4E-43 T 11-11-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 RB11482 54d5aa9543c9be86f7abfd4ce8ca7dbb 454 SMART SM00849 59 271 7.1E-22 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB7850 f5ad2b9da7d53a89f8d74114a9092432 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.3E-55 T 11-11-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RB7850 f5ad2b9da7d53a89f8d74114a9092432 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.199 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RB7850 f5ad2b9da7d53a89f8d74114a9092432 122 Gene3D G3DSA:2.40.150.20 1 122 4.0E-52 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RB7850 f5ad2b9da7d53a89f8d74114a9092432 122 SMART SM01374 1 122 7.5E-83 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RB7850 f5ad2b9da7d53a89f8d74114a9092432 122 SUPERFAMILY SSF50193 1 122 8.63E-51 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RB7850 f5ad2b9da7d53a89f8d74114a9092432 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-11-2016 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7850 f5ad2b9da7d53a89f8d74114a9092432 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.7E-54 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RB10364 64e10de03f737fa9a2e1428c4fa13c10 396 Gene3D G3DSA:3.40.50.300 107 138 2.5E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10364 64e10de03f737fa9a2e1428c4fa13c10 396 Gene3D G3DSA:3.40.50.300 191 335 2.5E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10364 64e10de03f737fa9a2e1428c4fa13c10 396 SMART SM00382 126 317 5.3E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10364 64e10de03f737fa9a2e1428c4fa13c10 396 SUPERFAMILY SSF52540 106 153 2.7E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10364 64e10de03f737fa9a2e1428c4fa13c10 396 SUPERFAMILY SSF52540 197 373 2.7E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10364 64e10de03f737fa9a2e1428c4fa13c10 396 Gene3D G3DSA:3.40.50.300 139 168 7.8E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3321 de6a5d090ca75601bb82abfceb4c09be 119 Gene3D G3DSA:3.10.180.10 8 117 1.0E-27 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB3321 de6a5d090ca75601bb82abfceb4c09be 119 SUPERFAMILY SSF54593 8 118 3.85E-21 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB3321 de6a5d090ca75601bb82abfceb4c09be 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 113 1.8E-7 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RB3828 7253df6edaccbddd177b4b3909654457 800 Gene3D G3DSA:3.20.20.80 470 782 2.5E-11 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB3828 7253df6edaccbddd177b4b3909654457 800 SUPERFAMILY SSF51011 344 431 2.3E-8 T 11-11-2016 RB3828 7253df6edaccbddd177b4b3909654457 800 SUPERFAMILY SSF51445 513 781 1.29E-26 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 Gene3D G3DSA:3.40.50.300 305 441 3.1E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 SMART SM00487 69 260 3.3E-23 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 Pfam PF11898 Domain of unknown function (DUF3418) 761 1383 2.6E-176 T 11-11-2016 IPR024590 RNA helicase HrpA, C-terminal RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 617 748 3.0E-19 T 11-11-2016 IPR011709 Domain of unknown function DUF1605 RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 Pfam PF00271 Helicase conserved C-terminal domain 305 427 3.9E-11 T 11-11-2016 IPR001650 Helicase, C-terminal RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 Pfam PF04408 Helicase associated domain (HA2) 489 575 5.2E-17 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 SMART SM00847 487 577 1.2E-31 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 186 195 - T 11-11-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 64 627 5.0E-238 T 11-11-2016 IPR010222 RNA helicase HrpA GO:0004004 RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 SUPERFAMILY SSF52540 71 608 2.44E-87 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 Gene3D G3DSA:3.40.50.300 71 228 9.2E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 SMART SM00490 325 427 1.2E-14 T 11-11-2016 IPR001650 Helicase, C-terminal RB4247 0b4ee3b6f91d91b50de4fd76083da464 1384 Pfam PF00270 DEAD/DEAH box helicase 78 227 8.0E-7 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB3605 4fed83b617ea59b7cad3cb6287069404 614 Pfam PF00563 EAL domain 363 593 1.8E-66 T 11-11-2016 IPR001633 EAL domain RB3605 4fed83b617ea59b7cad3cb6287069404 614 SUPERFAMILY SSF55073 193 348 1.33E-46 T 11-11-2016 IPR029787 Nucleotide cyclase RB3605 4fed83b617ea59b7cad3cb6287069404 614 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 345 1.0E-38 T 11-11-2016 IPR000160 GGDEF domain RB3605 4fed83b617ea59b7cad3cb6287069404 614 SUPERFAMILY SSF141868 363 603 1.96E-85 T 11-11-2016 IPR001633 EAL domain RB3605 4fed83b617ea59b7cad3cb6287069404 614 Pfam PF00072 Response regulator receiver domain 43 151 7.2E-10 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3605 4fed83b617ea59b7cad3cb6287069404 614 Gene3D G3DSA:3.20.20.450 361 601 1.1E-89 T 11-11-2016 IPR001633 EAL domain RB3605 4fed83b617ea59b7cad3cb6287069404 614 Gene3D G3DSA:3.40.50.2300 8 164 1.0E-29 T 11-11-2016 RB3605 4fed83b617ea59b7cad3cb6287069404 614 Gene3D G3DSA:3.30.70.270 190 355 3.5E-54 T 11-11-2016 RB3605 4fed83b617ea59b7cad3cb6287069404 614 Pfam PF00990 Diguanylate cyclase, GGDEF domain 188 342 1.2E-45 T 11-11-2016 IPR000160 GGDEF domain RB3605 4fed83b617ea59b7cad3cb6287069404 614 SUPERFAMILY SSF52172 9 155 1.36E-12 T 11-11-2016 IPR011006 CheY-like superfamily RB3605 4fed83b617ea59b7cad3cb6287069404 614 SMART SM00052 357 598 1.3E-107 T 11-11-2016 IPR001633 EAL domain RB3605 4fed83b617ea59b7cad3cb6287069404 614 SMART SM00267 177 347 4.3E-64 T 11-11-2016 IPR000160 GGDEF domain RB10439 2ff53d50c83174d1328c44702e4a331e 526 Pfam PF02397 Bacterial sugar transferase 328 520 2.1E-53 T 11-11-2016 IPR003362 Bacterial sugar transferase RB10439 2ff53d50c83174d1328c44702e4a331e 526 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 71 526 1.5E-116 T 11-11-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RB10439 2ff53d50c83174d1328c44702e4a331e 526 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 68 526 1.4E-183 T 11-11-2016 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 RB10439 2ff53d50c83174d1328c44702e4a331e 526 Pfam PF13727 CoA-binding domain 120 259 4.7E-7 T 11-11-2016 RB10558 1ceff2c2174c03437f52da3240473cbe 521 SUPERFAMILY SSF49785 388 436 2.83E-10 T 11-11-2016 IPR008979 Galactose-binding domain-like RB10558 1ceff2c2174c03437f52da3240473cbe 521 SUPERFAMILY SSF49785 464 515 2.83E-10 T 11-11-2016 IPR008979 Galactose-binding domain-like RB10558 1ceff2c2174c03437f52da3240473cbe 521 ProSitePatterns PS00018 EF-hand calcium-binding domain. 325 337 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB10558 1ceff2c2174c03437f52da3240473cbe 521 Gene3D G3DSA:2.60.120.260 401 514 7.9E-6 T 11-11-2016 IPR008979 Galactose-binding domain-like RB10558 1ceff2c2174c03437f52da3240473cbe 521 ProSitePatterns PS00018 EF-hand calcium-binding domain. 287 299 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB10558 1ceff2c2174c03437f52da3240473cbe 521 ProSitePatterns PS00018 EF-hand calcium-binding domain. 166 178 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB10558 1ceff2c2174c03437f52da3240473cbe 521 Gene3D G3DSA:1.10.238.10 47 113 3.2E-7 T 11-11-2016 IPR011992 EF-hand domain pair RB10558 1ceff2c2174c03437f52da3240473cbe 521 Gene3D G3DSA:1.10.238.10 145 208 3.2E-7 T 11-11-2016 IPR011992 EF-hand domain pair RB10558 1ceff2c2174c03437f52da3240473cbe 521 Gene3D G3DSA:1.10.238.10 283 379 5.2E-12 T 11-11-2016 IPR011992 EF-hand domain pair RB10558 1ceff2c2174c03437f52da3240473cbe 521 Pfam PF01483 Proprotein convertase P-domain 403 513 4.9E-7 T 11-11-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 RB10558 1ceff2c2174c03437f52da3240473cbe 521 SUPERFAMILY SSF47473 246 306 1.66E-10 T 11-11-2016 IPR011992 EF-hand domain pair RB10558 1ceff2c2174c03437f52da3240473cbe 521 SUPERFAMILY SSF47473 50 82 1.66E-10 T 11-11-2016 IPR011992 EF-hand domain pair RB10558 1ceff2c2174c03437f52da3240473cbe 521 SUPERFAMILY SSF47473 150 185 1.66E-10 T 11-11-2016 IPR011992 EF-hand domain pair RB10558 1ceff2c2174c03437f52da3240473cbe 521 ProSitePatterns PS00018 EF-hand calcium-binding domain. 353 365 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB10558 1ceff2c2174c03437f52da3240473cbe 521 Pfam PF13202 EF hand 283 300 3.2E-4 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB10558 1ceff2c2174c03437f52da3240473cbe 521 Pfam PF13202 EF hand 52 73 0.14 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB10558 1ceff2c2174c03437f52da3240473cbe 521 ProSitePatterns PS00018 EF-hand calcium-binding domain. 192 204 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB10558 1ceff2c2174c03437f52da3240473cbe 521 SUPERFAMILY SSF47473 283 382 3.24E-13 T 11-11-2016 IPR011992 EF-hand domain pair RB10558 1ceff2c2174c03437f52da3240473cbe 521 ProSitePatterns PS00018 EF-hand calcium-binding domain. 59 71 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB6517 79d13974d1df26707cb0badd8f82af82 178 SUPERFAMILY SSF88659 112 170 2.62E-7 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6517 79d13974d1df26707cb0badd8f82af82 178 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 13 169 6.4E-46 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB6517 79d13974d1df26707cb0badd8f82af82 178 Gene3D G3DSA:1.10.10.10 122 173 3.1E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6517 79d13974d1df26707cb0badd8f82af82 178 Gene3D G3DSA:1.10.1740.10 10 95 1.3E-17 T 11-11-2016 RB6517 79d13974d1df26707cb0badd8f82af82 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 165 4.0E-20 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6517 79d13974d1df26707cb0badd8f82af82 178 SUPERFAMILY SSF88946 8 95 3.14E-17 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6517 79d13974d1df26707cb0badd8f82af82 178 Pfam PF04542 Sigma-70 region 2 22 84 1.2E-13 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1532 abe448a94e0635d07f64367e59c93f78 657 Gene3D G3DSA:3.30.200.20 24 94 5.2E-23 T 11-11-2016 RB1532 abe448a94e0635d07f64367e59c93f78 657 SUPERFAMILY SSF56112 24 285 1.34E-77 T 11-11-2016 IPR011009 Protein kinase-like domain RB1532 abe448a94e0635d07f64367e59c93f78 657 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 35 58 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB1532 abe448a94e0635d07f64367e59c93f78 657 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 148 160 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB1532 abe448a94e0635d07f64367e59c93f78 657 SMART SM00220 29 286 9.2E-65 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1532 abe448a94e0635d07f64367e59c93f78 657 Gene3D G3DSA:1.10.510.10 95 282 6.8E-51 T 11-11-2016 RB1532 abe448a94e0635d07f64367e59c93f78 657 Pfam PF00069 Protein kinase domain 29 277 3.7E-53 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82866 923 1119 3.27E-42 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82693 659 762 1.26E-22 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 Gene3D G3DSA:3.30.2090.10 182 273 4.6E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.4E-80 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.4E-80 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.4E-80 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.4E-80 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.4E-80 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.4E-80 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.4E-80 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82714 183 272 4.45E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82866 297 499 3.01E-50 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 Gene3D G3DSA:3.30.70.1430 661 762 1.5E-22 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 Gene3D G3DSA:3.30.70.1430 38 140 1.3E-24 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82714 814 898 1.29E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 Gene3D G3DSA:1.10.3850.10 905 1120 2.2E-54 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 Gene3D G3DSA:3.30.2090.10 814 899 1.3E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82693 38 129 2.62E-20 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82693 275 332 4.71E-21 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82693 135 182 4.71E-21 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82693 900 949 9.16E-24 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 SUPERFAMILY SSF82693 763 813 9.16E-24 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 Gene3D G3DSA:1.20.1640.10 294 501 9.2E-59 T 11-11-2016 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 Pfam PF00873 AcrB/AcrD/AcrF family 572 1118 1.1E-130 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB2383 d13d6ee96b6c6515483060c2a5ff6b7f 1144 Pfam PF00873 AcrB/AcrD/AcrF family 1 534 1.2E-158 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 SUPERFAMILY SSF69322 295 514 4.97E-11 T 11-11-2016 RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 Gene3D G3DSA:2.130.10.10 399 498 6.1E-9 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 Gene3D G3DSA:2.130.10.10 306 358 6.1E-9 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 Pfam PF03983 SLA1 homology domain 1, SHD1 72 125 2.9E-10 T 11-11-2016 IPR007131 SLA1 homology domain 1, SHD1 GO:0008092|GO:0030674|GO:0042802|GO:0043130 RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 Gene3D G3DSA:2.30.30.270 130 216 7.4E-8 T 11-11-2016 RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 69 127 6.0E-4 T 11-11-2016 RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 SMART SM00333 133 190 0.0024 T 11-11-2016 IPR002999 Tudor domain RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 SUPERFAMILY SSF54160 132 188 5.95E-10 T 11-11-2016 IPR016197 Chromo domain-like RB3675 d63128e702a2f27268fcdf62e4f61cc6 742 SMART SM00743 133 190 0.0024 T 11-11-2016 IPR014002 Agenet domain, plant type RB10165 c85e8fa61b882d811e3f111640140c2a 1048 Pfam PF06452 Carbohydrate family 9 binding domain-like 805 897 2.6E-6 T 11-11-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 RB10165 c85e8fa61b882d811e3f111640140c2a 1048 SUPERFAMILY SSF54001 65 291 1.82E-30 T 11-11-2016 RB10165 c85e8fa61b882d811e3f111640140c2a 1048 Pfam PF01841 Transglutaminase-like superfamily 127 219 4.1E-18 T 11-11-2016 IPR002931 Transglutaminase-like RB10165 c85e8fa61b882d811e3f111640140c2a 1048 Gene3D G3DSA:3.40.50.1820 459 670 6.9E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10165 c85e8fa61b882d811e3f111640140c2a 1048 SUPERFAMILY SSF49344 952 1045 2.43E-34 T 11-11-2016 RB10165 c85e8fa61b882d811e3f111640140c2a 1048 SUPERFAMILY SSF49344 794 915 2.43E-34 T 11-11-2016 RB10165 c85e8fa61b882d811e3f111640140c2a 1048 SMART SM00460 168 226 4.2E-4 T 11-11-2016 IPR002931 Transglutaminase-like RB10165 c85e8fa61b882d811e3f111640140c2a 1048 SUPERFAMILY SSF53474 468 653 8.47E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10165 c85e8fa61b882d811e3f111640140c2a 1048 Gene3D G3DSA:2.60.40.1190 940 1046 7.3E-43 T 11-11-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 RB10165 c85e8fa61b882d811e3f111640140c2a 1048 Gene3D G3DSA:2.60.40.1190 794 898 7.3E-43 T 11-11-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 RB3468 346f8ae98c7037a89ddd70c1fff19fa8 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 209 292 1.4E-19 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RB3468 346f8ae98c7037a89ddd70c1fff19fa8 341 Pfam PF01548 Transposase 24 166 6.5E-18 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RB10096 346f8ae98c7037a89ddd70c1fff19fa8 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 209 292 1.4E-19 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RB10096 346f8ae98c7037a89ddd70c1fff19fa8 341 Pfam PF01548 Transposase 24 166 6.5E-18 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RB2284 346f8ae98c7037a89ddd70c1fff19fa8 341 Pfam PF02371 Transposase IS116/IS110/IS902 family 209 292 1.4E-19 T 11-11-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RB2284 346f8ae98c7037a89ddd70c1fff19fa8 341 Pfam PF01548 Transposase 24 166 6.5E-18 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RB357 d1449907bee4e3ac1878b6434645e13b 251 Gene3D G3DSA:3.40.50.150 35 227 5.7E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB357 d1449907bee4e3ac1878b6434645e13b 251 SUPERFAMILY SSF53335 35 249 2.2E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB357 d1449907bee4e3ac1878b6434645e13b 251 Pfam PF08241 Methyltransferase domain 72 170 1.4E-17 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RB6355 8a17441becc95cea524b03c5f73a9930 505 SUPERFAMILY SSF54862 133 154 8.37E-25 T 11-11-2016 RB6355 8a17441becc95cea524b03c5f73a9930 505 SUPERFAMILY SSF54862 200 276 8.37E-25 T 11-11-2016 RB6355 8a17441becc95cea524b03c5f73a9930 505 SUPERFAMILY SSF54862 304 370 8.37E-25 T 11-11-2016 RB6355 8a17441becc95cea524b03c5f73a9930 505 Gene3D G3DSA:2.60.40.10 387 495 1.3E-13 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB6355 8a17441becc95cea524b03c5f73a9930 505 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 304 315 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB6355 8a17441becc95cea524b03c5f73a9930 505 Gene3D G3DSA:1.10.1060.10 248 312 6.4E-7 T 11-11-2016 RB6355 8a17441becc95cea524b03c5f73a9930 505 Gene3D G3DSA:3.30.70.20 313 352 5.2E-5 T 11-11-2016 RB6355 8a17441becc95cea524b03c5f73a9930 505 Pfam PF13746 4Fe-4S dicluster domain 244 357 6.8E-50 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB6355 8a17441becc95cea524b03c5f73a9930 505 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 68 498 4.5E-151 T 11-11-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 RB6355 8a17441becc95cea524b03c5f73a9930 505 Pfam PF12801 4Fe-4S binding domain 122 163 7.8E-13 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB6355 8a17441becc95cea524b03c5f73a9930 505 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 386 492 2.1E-13 T 11-11-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain RB8969 9f40f1cc546c3d945548249ce38b8399 101 Hamap MF_00580 10 kDa chaperonin [groS]. 8 101 25.804 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 PRINTS PR00297 10kDa chaperonin signature 87 100 2.0E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 PRINTS PR00297 10kDa chaperonin signature 66 78 2.0E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 PRINTS PR00297 10kDa chaperonin signature 31 52 2.0E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 PRINTS PR00297 10kDa chaperonin signature 9 24 2.0E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 Pfam PF00166 Chaperonin 10 Kd subunit 8 100 1.5E-33 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 SMART SM00883 8 100 3.9E-53 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 ProSitePatterns PS00681 Chaperonins cpn10 signature. 9 33 - T 11-11-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 Gene3D G3DSA:2.30.33.40 8 100 5.3E-37 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB8969 9f40f1cc546c3d945548249ce38b8399 101 SUPERFAMILY SSF50129 7 100 3.77E-33 T 11-11-2016 IPR011032 GroES-like RB3597 ff9d241b02efdd012fe1f46c5e4b0e20 431 Gene3D G3DSA:3.40.640.10 44 293 6.1E-80 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB3597 ff9d241b02efdd012fe1f46c5e4b0e20 431 SUPERFAMILY SSF53383 11 414 5.69E-120 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB3597 ff9d241b02efdd012fe1f46c5e4b0e20 431 Pfam PF00266 Aminotransferase class-V 33 404 5.8E-132 T 11-11-2016 IPR000192 Aminotransferase class V domain RB3597 ff9d241b02efdd012fe1f46c5e4b0e20 431 Gene3D G3DSA:3.90.1150.10 294 410 6.0E-28 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB3597 ff9d241b02efdd012fe1f46c5e4b0e20 431 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 14 415 1.4E-157 T 11-11-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 Pfam PF13229 Right handed beta helix region 2896 3037 1.3E-4 T 11-11-2016 RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 624 701 7.6E-7 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 1621 1717 2.0E-8 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 Gene3D G3DSA:3.40.390.10 465 598 2.0E-15 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SUPERFAMILY SSF55486 466 616 5.31E-21 T 11-11-2016 RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SUPERFAMILY SSF88633 6037 6278 1.65E-14 T 11-11-2016 RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 6787 6874 6.6E-6 T 11-11-2016 IPR010221 VCBS repeat RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 Pfam PF00404 Dockerin type I repeat 7065 7085 1.9E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SUPERFAMILY SSF51126 2831 3077 1.49E-7 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 Gene3D G3DSA:2.60.120.380 622 704 2.3E-4 T 11-11-2016 RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 Gene3D G3DSA:2.60.120.380 1618 1730 1.1E-4 T 11-11-2016 RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 Pfam PF07595 Planctomycete extracellular 99 121 3.4E-4 T 11-11-2016 IPR011506 Planctomycete extracellular RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SMART SM00710 2893 2915 6500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SMART SM00710 1333 1355 610.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SMART SM00710 3020 3048 1300.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SMART SM00710 2973 2996 2100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SMART SM00710 1110 1131 5900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SMART SM00710 1296 1325 8900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SMART SM00710 1382 1404 1600.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5524 540d1ebd7997aa0b083a3bd364ab03f1 7223 SMART SM00710 2943 2963 1400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB6809 d19e17b95c7a016e320712f14efa720c 316 Pfam PF02769 AIR synthase related protein, C-terminal domain 171 286 2.4E-10 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB6809 d19e17b95c7a016e320712f14efa720c 316 Gene3D G3DSA:3.90.650.10 150 307 5.9E-32 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB6809 d19e17b95c7a016e320712f14efa720c 316 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 305 28.482 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RB6809 d19e17b95c7a016e320712f14efa720c 316 SUPERFAMILY SSF56042 147 289 1.02E-28 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB6809 d19e17b95c7a016e320712f14efa720c 316 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 144 7.5E-21 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB6809 d19e17b95c7a016e320712f14efa720c 316 PIRSF PIRSF005303 1 308 2.4E-89 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RB6809 d19e17b95c7a016e320712f14efa720c 316 Gene3D G3DSA:3.30.1330.10 4 147 2.0E-34 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB6809 d19e17b95c7a016e320712f14efa720c 316 SUPERFAMILY SSF55326 16 145 2.09E-27 T 11-11-2016 RB6809 d19e17b95c7a016e320712f14efa720c 316 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 9 307 8.6E-65 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RB7812 98f4a4ace1290df8830219eea5a47867 262 Gene3D G3DSA:3.90.226.10 2 203 1.0E-47 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB7812 98f4a4ace1290df8830219eea5a47867 262 SUPERFAMILY SSF52096 2 261 7.97E-63 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB7812 98f4a4ace1290df8830219eea5a47867 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 261 1.1E-46 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RB7812 98f4a4ace1290df8830219eea5a47867 262 Gene3D G3DSA:1.10.12.10 206 261 1.1E-13 T 11-11-2016 IPR014748 Crontonase, C-terminal RB7812 98f4a4ace1290df8830219eea5a47867 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 11-11-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RB4872 ad8a29aa6a12c476f49f15decbad4b5d 496 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 189 345 1.8E-11 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB4872 ad8a29aa6a12c476f49f15decbad4b5d 496 Pfam PF13533 Biotin-lipoyl like 90 136 3.6E-9 T 11-11-2016 RB4872 ad8a29aa6a12c476f49f15decbad4b5d 496 Gene3D G3DSA:2.40.50.100 248 279 6.7E-14 T 11-11-2016 RB4872 ad8a29aa6a12c476f49f15decbad4b5d 496 Gene3D G3DSA:2.40.50.100 92 121 6.7E-14 T 11-11-2016 RB4872 ad8a29aa6a12c476f49f15decbad4b5d 496 SUPERFAMILY SSF111369 77 143 4.45E-7 T 11-11-2016 RB4872 ad8a29aa6a12c476f49f15decbad4b5d 496 SUPERFAMILY SSF111369 220 323 1.57E-9 T 11-11-2016 RB12645 29ada5670ad12b26ab7e9633f2a09d23 123 Gene3D G3DSA:2.40.50.140 39 123 8.8E-4 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB12645 29ada5670ad12b26ab7e9633f2a09d23 123 Pfam PF11325 Domain of unknown function (DUF3127) 6 90 1.5E-22 T 11-11-2016 IPR021474 Protein of unknown function DUF3127 RB12506 1f5e2ffc9771f7abd55ba06116b403bf 145 Gene3D G3DSA:3.30.750.24 45 136 9.4E-17 T 11-11-2016 IPR002645 STAS domain RB12506 1f5e2ffc9771f7abd55ba06116b403bf 145 Pfam PF01740 STAS domain 50 122 2.4E-7 T 11-11-2016 IPR002645 STAS domain RB12506 1f5e2ffc9771f7abd55ba06116b403bf 145 SUPERFAMILY SSF52091 45 133 7.85E-16 T 11-11-2016 IPR002645 STAS domain RB8387 c0b82697d4eda1cf0535803487a8b9dc 171 SUPERFAMILY SSF109854 21 167 7.69E-5 T 11-11-2016 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 111 256 1.4E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9109 e6b366d627626fc0bd4f4db427bf106e 897 Gene3D G3DSA:3.30.230.10 304 471 2.7E-65 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB9109 e6b366d627626fc0bd4f4db427bf106e 897 SMART SM00433 113 675 9.1E-226 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 825 886 4.3E-27 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR00418 DNA topoisomerase II family signature 568 584 5.8E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR00418 DNA topoisomerase II family signature 502 516 5.8E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR00418 DNA topoisomerase II family signature 586 603 5.8E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR00418 DNA topoisomerase II family signature 829 845 5.8E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR00418 DNA topoisomerase II family signature 113 128 5.8E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR00418 DNA topoisomerase II family signature 148 161 5.8E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR00418 DNA topoisomerase II family signature 197 211 5.8E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR00418 DNA topoisomerase II family signature 351 364 5.8E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 Pfam PF01751 Toprim domain 501 612 2.7E-15 T 11-11-2016 IPR006171 Toprim domain RB9109 e6b366d627626fc0bd4f4db427bf106e 897 ProSitePatterns PS00177 DNA topoisomerase II signature. 504 512 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 Gene3D G3DSA:3.30.565.10 84 299 3.4E-79 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9109 e6b366d627626fc0bd4f4db427bf106e 897 SUPERFAMILY SSF55874 83 297 5.88E-60 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9109 e6b366d627626fc0bd4f4db427bf106e 897 SUPERFAMILY SSF54211 304 471 1.14E-54 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 441 455 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 393 409 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 850 862 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 279 292 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 552 561 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 264 279 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 455 475 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 866 882 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 PRINTS PR01159 DNA gyrase subunit B signature 303 325 4.6E-61 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 Gene3D G3DSA:3.40.50.670 486 631 6.1E-82 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 Gene3D G3DSA:3.40.50.670 811 879 6.1E-82 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 SMART SM00387 109 259 1.4E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9109 e6b366d627626fc0bd4f4db427bf106e 897 Pfam PF00204 DNA gyrase B 304 471 3.8E-57 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 SUPERFAMILY SSF56719 476 641 7.59E-76 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RB9109 e6b366d627626fc0bd4f4db427bf106e 897 SUPERFAMILY SSF56719 823 890 7.59E-76 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RB9103 a95e8af91c10064a245189c0423f3744 899 SMART SM00382 638 801 7.6E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9103 a95e8af91c10064a245189c0423f3744 899 SMART SM00382 217 363 8.7E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9103 a95e8af91c10064a245189c0423f3744 899 Gene3D G3DSA:1.10.8.60 362 444 3.3E-36 T 11-11-2016 RB9103 a95e8af91c10064a245189c0423f3744 899 Gene3D G3DSA:3.40.50.300 594 818 1.3E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9103 a95e8af91c10064a245189c0423f3744 899 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 353 7.9E-12 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB9103 a95e8af91c10064a245189c0423f3744 899 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 808 888 5.9E-27 T 11-11-2016 IPR019489 Clp ATPase, C-terminal RB9103 a95e8af91c10064a245189c0423f3744 899 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 26 897 0.0 T 11-11-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RB9103 a95e8af91c10064a245189c0423f3744 899 Gene3D G3DSA:1.10.8.60 819 898 5.3E-32 T 11-11-2016 RB9103 a95e8af91c10064a245189c0423f3744 899 Pfam PF07724 AAA domain (Cdc48 subfamily) 637 801 1.5E-54 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB9103 a95e8af91c10064a245189c0423f3744 899 SUPERFAMILY SSF81923 24 175 7.65E-32 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 RB9103 a95e8af91c10064a245189c0423f3744 899 SUPERFAMILY SSF52540 587 897 9.41E-84 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9103 a95e8af91c10064a245189c0423f3744 899 Gene3D G3DSA:1.10.1780.10 22 166 3.4E-35 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 RB9103 a95e8af91c10064a245189c0423f3744 899 Gene3D G3DSA:3.40.50.300 178 360 3.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9103 a95e8af91c10064a245189c0423f3744 899 SMART SM01086 808 897 1.6E-38 T 11-11-2016 IPR019489 Clp ATPase, C-terminal RB9103 a95e8af91c10064a245189c0423f3744 899 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 8.2E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 RB9103 a95e8af91c10064a245189c0423f3744 899 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 716 734 8.2E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 RB9103 a95e8af91c10064a245189c0423f3744 899 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 642 660 8.2E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 RB9103 a95e8af91c10064a245189c0423f3744 899 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 749 763 8.2E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 RB9103 a95e8af91c10064a245189c0423f3744 899 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 37 88 7.5E-9 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 RB9103 a95e8af91c10064a245189c0423f3744 899 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 117 164 2.2E-8 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 RB9103 a95e8af91c10064a245189c0423f3744 899 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RB9103 a95e8af91c10064a245189c0423f3744 899 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 672 690 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 RB9103 a95e8af91c10064a245189c0423f3744 899 SUPERFAMILY SSF52540 176 551 2.02E-87 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10844 0ef4bcc8ea7e46506b6b937ccb0f1992 258 Pfam PF00583 Acetyltransferase (GNAT) family 133 207 5.2E-7 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB10844 0ef4bcc8ea7e46506b6b937ccb0f1992 258 SUPERFAMILY SSF55729 102 220 1.45E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10844 0ef4bcc8ea7e46506b6b937ccb0f1992 258 Gene3D G3DSA:3.40.630.30 56 97 9.1E-10 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10844 0ef4bcc8ea7e46506b6b937ccb0f1992 258 Gene3D G3DSA:3.40.630.30 162 215 9.1E-10 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10844 0ef4bcc8ea7e46506b6b937ccb0f1992 258 Gene3D G3DSA:3.40.630.30 99 161 1.6E-5 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB1776 4b6cdbbf5ebf7231f9abe2d3db381c51 384 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 6.0E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1776 4b6cdbbf5ebf7231f9abe2d3db381c51 384 Gene3D G3DSA:3.30.700.10 9 70 1.2E-6 T 11-11-2016 RB1776 4b6cdbbf5ebf7231f9abe2d3db381c51 384 Pfam PF07596 Protein of unknown function (DUF1559) 33 341 3.7E-64 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB1776 4b6cdbbf5ebf7231f9abe2d3db381c51 384 Pfam PF13633 Prokaryotic N-terminal methylation site 7 32 2.5E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1776 4b6cdbbf5ebf7231f9abe2d3db381c51 384 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1776 4b6cdbbf5ebf7231f9abe2d3db381c51 384 SUPERFAMILY SSF54523 9 146 6.98E-28 T 11-11-2016 RB6394 9710e17e241cb8deba1895a21966af25 406 Gene3D G3DSA:3.40.50.720 89 200 6.6E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6394 9710e17e241cb8deba1895a21966af25 406 SUPERFAMILY SSF52283 87 221 1.89E-37 T 11-11-2016 RB6394 9710e17e241cb8deba1895a21966af25 406 Gene3D G3DSA:3.40.50.720 201 374 8.3E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6394 9710e17e241cb8deba1895a21966af25 406 SUPERFAMILY SSF51735 187 375 7.01E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6394 9710e17e241cb8deba1895a21966af25 406 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 196 374 1.6E-58 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RB6394 9710e17e241cb8deba1895a21966af25 406 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 90 402 2.4E-29 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RB6394 9710e17e241cb8deba1895a21966af25 406 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 235 263 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RB6394 9710e17e241cb8deba1895a21966af25 406 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 313 329 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RB5715 f1974dc10d1fe095f9466c9bc431ff97 210 Gene3D G3DSA:1.10.3680.10 75 202 2.3E-4 T 11-11-2016 IPR029024 TerB-like RB5715 f1974dc10d1fe095f9466c9bc431ff97 210 SUPERFAMILY SSF158682 75 201 2.09E-6 T 11-11-2016 IPR029024 TerB-like RB5715 f1974dc10d1fe095f9466c9bc431ff97 210 Pfam PF17032 zinc-ribbon family 19 79 2.2E-9 T 11-11-2016 IPR031493 Zinc-ribbon 15 RB5715 f1974dc10d1fe095f9466c9bc431ff97 210 Pfam PF05099 Tellurite resistance protein TerB 74 199 5.4E-6 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal RB4530 521ef8f045730272ab2b02b9c980accd 1130 PRINTS PR00702 Acriflavin resistance protein family signature 415 439 4.7E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4530 521ef8f045730272ab2b02b9c980accd 1130 PRINTS PR00702 Acriflavin resistance protein family signature 30 54 4.7E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4530 521ef8f045730272ab2b02b9c980accd 1130 PRINTS PR00702 Acriflavin resistance protein family signature 387 408 4.7E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4530 521ef8f045730272ab2b02b9c980accd 1130 PRINTS PR00702 Acriflavin resistance protein family signature 58 76 4.7E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4530 521ef8f045730272ab2b02b9c980accd 1130 PRINTS PR00702 Acriflavin resistance protein family signature 499 522 4.7E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4530 521ef8f045730272ab2b02b9c980accd 1130 PRINTS PR00702 Acriflavin resistance protein family signature 360 383 4.7E-30 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4530 521ef8f045730272ab2b02b9c980accd 1130 SUPERFAMILY SSF82714 203 287 2.35E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB4530 521ef8f045730272ab2b02b9c980accd 1130 SUPERFAMILY SSF82714 801 886 3.53E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB4530 521ef8f045730272ab2b02b9c980accd 1130 SUPERFAMILY SSF82866 887 1110 1.96E-40 T 11-11-2016 RB4530 521ef8f045730272ab2b02b9c980accd 1130 Gene3D G3DSA:1.10.3850.10 892 1110 2.3E-46 T 11-11-2016 RB4530 521ef8f045730272ab2b02b9c980accd 1130 Gene3D G3DSA:1.10.3850.10 307 526 9.9E-51 T 11-11-2016 RB4530 521ef8f045730272ab2b02b9c980accd 1130 SUPERFAMILY SSF82866 320 525 3.14E-37 T 11-11-2016 RB4530 521ef8f045730272ab2b02b9c980accd 1130 SUPERFAMILY SSF82693 157 202 8.24E-17 T 11-11-2016 RB4530 521ef8f045730272ab2b02b9c980accd 1130 SUPERFAMILY SSF82693 298 351 8.24E-17 T 11-11-2016 RB4530 521ef8f045730272ab2b02b9c980accd 1130 SUPERFAMILY SSF82693 61 146 1.18E-20 T 11-11-2016 RB4530 521ef8f045730272ab2b02b9c980accd 1130 Gene3D G3DSA:3.30.2090.10 801 885 3.7E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB4530 521ef8f045730272ab2b02b9c980accd 1130 Gene3D G3DSA:3.30.2090.10 203 286 5.7E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB4530 521ef8f045730272ab2b02b9c980accd 1130 Pfam PF00873 AcrB/AcrD/AcrF family 23 1108 1.4E-246 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4530 521ef8f045730272ab2b02b9c980accd 1130 Gene3D G3DSA:3.30.70.1430 62 160 3.6E-25 T 11-11-2016 RB11870 e30e21bd0075f0d11ba77290443a4306 354 Pfam PF08668 HDOD domain 74 268 1.2E-53 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD RB11870 e30e21bd0075f0d11ba77290443a4306 354 SUPERFAMILY SSF109604 70 334 1.4E-54 T 11-11-2016 RB11870 e30e21bd0075f0d11ba77290443a4306 354 Gene3D G3DSA:1.10.3150.10 73 333 1.2E-62 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 171 275 5.3E-41 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 Gene3D G3DSA:3.40.50.720 10 167 6.0E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 SUPERFAMILY SSF48179 171 275 1.0E-37 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 SUPERFAMILY SSF51735 11 166 1.93E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 11 109 1.8E-15 T 11-11-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 PIRSF PIRSF000193 8 276 8.3E-77 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 8 275 27.609 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 10 275 6.1E-83 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RB3891 7f34b372ba734ac0dfbcb3961f31d5be 276 Gene3D G3DSA:1.10.3730.10 171 275 1.2E-45 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RB1821 15d12258cd411db18c5cdc945e7f017e 802 Gene3D G3DSA:3.30.200.20 54 146 1.5E-19 T 11-11-2016 RB1821 15d12258cd411db18c5cdc945e7f017e 802 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 169 181 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB1821 15d12258cd411db18c5cdc945e7f017e 802 SUPERFAMILY SSF56112 53 319 7.14E-64 T 11-11-2016 IPR011009 Protein kinase-like domain RB1821 15d12258cd411db18c5cdc945e7f017e 802 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 58 81 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB1821 15d12258cd411db18c5cdc945e7f017e 802 Gene3D G3DSA:1.10.510.10 147 319 5.7E-39 T 11-11-2016 RB1821 15d12258cd411db18c5cdc945e7f017e 802 SMART SM00220 52 317 1.1E-55 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1821 15d12258cd411db18c5cdc945e7f017e 802 Pfam PF00069 Protein kinase domain 55 313 1.4E-43 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 12 224 6.8E-67 T 11-11-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 Gene3D G3DSA:3.40.190.10 10 111 1.1E-33 T 11-11-2016 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 240 322 9.3E-15 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 245 261 - T 11-11-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 PRINTS PR00151 Porphobilinogen deaminase signature 244 261 1.9E-9 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 PRINTS PR00151 Porphobilinogen deaminase signature 79 98 1.9E-9 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 Gene3D G3DSA:3.30.160.40 235 331 1.0E-20 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 SUPERFAMILY SSF54782 234 335 2.88E-17 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 SUPERFAMILY SSF53850 11 232 1.66E-67 T 11-11-2016 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 11 324 33.557 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 Gene3D G3DSA:3.40.190.10 112 213 5.0E-33 T 11-11-2016 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 12 320 5.7E-89 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB6828 e888f862d98a9395d1c22d5b76d8edee 337 PIRSF PIRSF001438 3 337 9.4E-109 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB13137 9ded42cd0088a0ed2ac0b0e9117eb50e 822 SUPERFAMILY SSF46626 89 181 2.87E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB13137 9ded42cd0088a0ed2ac0b0e9117eb50e 822 Pfam PF07640 QPP 1 34 1.4E-15 T 11-11-2016 IPR011507 QPP RB13137 9ded42cd0088a0ed2ac0b0e9117eb50e 822 Pfam PF07635 Planctomycete cytochrome C 101 159 4.9E-15 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB13137 9ded42cd0088a0ed2ac0b0e9117eb50e 822 Pfam PF07587 Protein of unknown function (DUF1553) 512 784 6.2E-81 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB13137 9ded42cd0088a0ed2ac0b0e9117eb50e 822 Pfam PF07583 Protein of unknown function (DUF1549) 222 434 7.1E-76 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB13137 9ded42cd0088a0ed2ac0b0e9117eb50e 822 Gene3D G3DSA:1.10.760.10 57 191 2.4E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8295 8454524fe6379335b71f9707aba7e16a 307 Pfam PF07596 Protein of unknown function (DUF1559) 93 232 2.1E-19 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB957 342e2f109342963b449f69fde5efa2e4 195 Pfam PF00589 Phage integrase family 11 170 8.9E-32 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB957 342e2f109342963b449f69fde5efa2e4 195 Gene3D G3DSA:1.10.443.10 8 171 1.6E-39 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB957 342e2f109342963b449f69fde5efa2e4 195 SUPERFAMILY SSF56349 8 171 3.24E-38 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 168 210 1.7E-16 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 136 178 4.3E-17 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 216 258 3.2E-6 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 184 226 1.0E-14 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 347 383 7.3E-9 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 379 415 2.5E-11 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 411 447 1.1E-13 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 443 484 6.1E-6 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 201 240 2.3E-8 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Pfam PF07639 YTV 107 146 1.2E-12 T 11-11-2016 IPR011521 YTV RB2247 60b0dacb781a0af720d89493313e63fb 579 Gene3D G3DSA:2.160.10.10 35 91 5.7E-4 T 11-11-2016 RB11334 6a96eeaface341ab19517783d6a159af 1899 Pfam PF13271 Domain of unknown function (DUF4062) 83 185 4.3E-6 T 11-11-2016 IPR025139 Domain of unknown function DUF4062 RB11334 6a96eeaface341ab19517783d6a159af 1899 Gene3D G3DSA:1.10.510.10 477 673 4.5E-40 T 11-11-2016 RB11334 6a96eeaface341ab19517783d6a159af 1899 SMART SM00320 1116 1154 0.0073 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB11334 6a96eeaface341ab19517783d6a159af 1899 SUPERFAMILY SSF69322 1419 1537 1.83E-6 T 11-11-2016 RB11334 6a96eeaface341ab19517783d6a159af 1899 Gene3D G3DSA:2.130.10.10 828 1003 9.3E-14 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB11334 6a96eeaface341ab19517783d6a159af 1899 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 515 527 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB11334 6a96eeaface341ab19517783d6a159af 1899 SMART SM00220 384 677 3.3E-40 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11334 6a96eeaface341ab19517783d6a159af 1899 Gene3D G3DSA:2.130.10.10 1411 1525 5.5E-8 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB11334 6a96eeaface341ab19517783d6a159af 1899 Gene3D G3DSA:2.130.10.10 1266 1338 5.5E-8 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB11334 6a96eeaface341ab19517783d6a159af 1899 SUPERFAMILY SSF50978 1107 1155 2.01E-17 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB11334 6a96eeaface341ab19517783d6a159af 1899 SUPERFAMILY SSF50978 841 987 2.01E-17 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB11334 6a96eeaface341ab19517783d6a159af 1899 Gene3D G3DSA:2.130.10.10 1107 1265 1.3E-13 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB11334 6a96eeaface341ab19517783d6a159af 1899 Pfam PF00069 Protein kinase domain 393 670 4.2E-37 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11334 6a96eeaface341ab19517783d6a159af 1899 SUPERFAMILY SSF50969 1100 1365 1.88E-22 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RB11334 6a96eeaface341ab19517783d6a159af 1899 SUPERFAMILY SSF56112 379 674 1.48E-58 T 11-11-2016 IPR011009 Protein kinase-like domain RB11334 6a96eeaface341ab19517783d6a159af 1899 Gene3D G3DSA:3.30.200.20 383 463 1.9E-16 T 11-11-2016 RB11334 6a96eeaface341ab19517783d6a159af 1899 Gene3D G3DSA:1.25.40.10 1621 1765 2.6E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11334 6a96eeaface341ab19517783d6a159af 1899 SUPERFAMILY SSF48452 1621 1809 8.1E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10330 2680b1e219807eaa978f96db91022cd7 860 SMART SM00448 584 699 7.2E-37 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10330 2680b1e219807eaa978f96db91022cd7 860 Gene3D G3DSA:1.20.120.160 723 818 2.8E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10330 2680b1e219807eaa978f96db91022cd7 860 Gene3D G3DSA:1.10.287.130 312 371 6.7E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10330 2680b1e219807eaa978f96db91022cd7 860 SMART SM00388 320 385 1.1E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10330 2680b1e219807eaa978f96db91022cd7 860 Pfam PF01627 Hpt domain 754 832 2.9E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10330 2680b1e219807eaa978f96db91022cd7 860 SUPERFAMILY SSF55874 374 558 6.68E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10330 2680b1e219807eaa978f96db91022cd7 860 SUPERFAMILY SSF47384 309 387 9.61E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10330 2680b1e219807eaa978f96db91022cd7 860 SUPERFAMILY SSF52172 584 715 2.13E-37 T 11-11-2016 IPR011006 CheY-like superfamily RB10330 2680b1e219807eaa978f96db91022cd7 860 Gene3D G3DSA:3.40.50.2300 585 721 5.8E-39 T 11-11-2016 RB10330 2680b1e219807eaa978f96db91022cd7 860 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 554 2.2E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10330 2680b1e219807eaa978f96db91022cd7 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 508 1.9E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10330 2680b1e219807eaa978f96db91022cd7 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 533 1.9E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10330 2680b1e219807eaa978f96db91022cd7 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 552 1.9E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10330 2680b1e219807eaa978f96db91022cd7 860 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 494 1.9E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10330 2680b1e219807eaa978f96db91022cd7 860 Pfam PF00512 His Kinase A (phospho-acceptor) domain 321 385 4.8E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10330 2680b1e219807eaa978f96db91022cd7 860 Pfam PF00072 Response regulator receiver domain 587 699 2.7E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10330 2680b1e219807eaa978f96db91022cd7 860 SMART SM00387 431 555 9.7E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10330 2680b1e219807eaa978f96db91022cd7 860 SUPERFAMILY SSF47226 682 695 4.58E-20 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10330 2680b1e219807eaa978f96db91022cd7 860 SUPERFAMILY SSF47226 733 813 4.58E-20 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10330 2680b1e219807eaa978f96db91022cd7 860 Gene3D G3DSA:3.30.565.10 372 556 2.1E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10330 2680b1e219807eaa978f96db91022cd7 860 SMART SM00073 743 842 5.0E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB10088 a67f5ea7e33a29328f3f230a2eb1acfa 297 Gene3D G3DSA:3.30.70.1030 181 192 8.0E-32 T 11-11-2016 RB10088 a67f5ea7e33a29328f3f230a2eb1acfa 297 Gene3D G3DSA:3.30.70.1030 33 144 8.0E-32 T 11-11-2016 RB10088 a67f5ea7e33a29328f3f230a2eb1acfa 297 Pfam PF06778 Chlorite dismutase 80 283 1.4E-53 T 11-11-2016 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase RB10088 a67f5ea7e33a29328f3f230a2eb1acfa 297 Gene3D G3DSA:3.30.70.1100 193 294 4.7E-38 T 11-11-2016 RB10088 a67f5ea7e33a29328f3f230a2eb1acfa 297 SUPERFAMILY SSF54909 32 143 1.13E-70 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB10088 a67f5ea7e33a29328f3f230a2eb1acfa 297 SUPERFAMILY SSF54909 171 295 1.13E-70 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB7232 c57002fc1049fdb0b914fca5b0ea2b7e 215 SUPERFAMILY SSF52540 2 213 2.55E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7232 c57002fc1049fdb0b914fca5b0ea2b7e 215 SMART SM00382 25 212 4.6E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7232 c57002fc1049fdb0b914fca5b0ea2b7e 215 Pfam PF00005 ABC transporter 17 162 7.0E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB7232 c57002fc1049fdb0b914fca5b0ea2b7e 215 Gene3D G3DSA:3.40.50.300 2 211 6.6E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7008 c240fad8b0686e51eecb30952a42ed19 459 Pfam PF16360 GTP-binding GTPase Middle Region 121 198 5.1E-27 T 11-11-2016 IPR032305 GTP-binding protein, middle domain RB7008 c240fad8b0686e51eecb30952a42ed19 459 Pfam PF01926 50S ribosome-binding GTPase 204 322 1.8E-18 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB7008 c240fad8b0686e51eecb30952a42ed19 459 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 16 363 3.9E-143 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 RB7008 c240fad8b0686e51eecb30952a42ed19 459 Pfam PF13167 GTP-binding GTPase N-terminal 31 118 1.5E-34 T 11-11-2016 IPR025121 GTPase HflX, N-terminal RB7008 c240fad8b0686e51eecb30952a42ed19 459 Gene3D G3DSA:3.40.50.300 201 364 5.7E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7008 c240fad8b0686e51eecb30952a42ed19 459 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 7.8E-8 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB7008 c240fad8b0686e51eecb30952a42ed19 459 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 7.8E-8 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB7008 c240fad8b0686e51eecb30952a42ed19 459 Hamap MF_00900 GTPase HflX [hflX]. 33 393 46.603 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 RB7008 c240fad8b0686e51eecb30952a42ed19 459 SUPERFAMILY SSF52540 201 372 3.02E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7008 c240fad8b0686e51eecb30952a42ed19 459 PIRSF PIRSF006809 7 425 1.2E-155 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 RB9536 b5f6ec6e87dd97ea50615c88b89e5acd 234 Gene3D G3DSA:1.10.287.70 126 221 4.9E-15 T 11-11-2016 RB9536 b5f6ec6e87dd97ea50615c88b89e5acd 234 SUPERFAMILY SSF81324 126 225 1.57E-17 T 11-11-2016 RB9536 b5f6ec6e87dd97ea50615c88b89e5acd 234 Pfam PF07885 Ion channel 148 221 1.5E-12 T 11-11-2016 IPR013099 Potassium channel domain RB1329 737a6dc02663894bb29bf6f0140f7f17 471 Gene3D G3DSA:3.30.1950.10 200 269 3.0E-12 T 11-11-2016 RB1329 737a6dc02663894bb29bf6f0140f7f17 471 Gene3D G3DSA:3.30.1950.10 292 340 4.6E-8 T 11-11-2016 RB1329 737a6dc02663894bb29bf6f0140f7f17 471 Gene3D G3DSA:3.10.560.10 343 436 9.4E-12 T 11-11-2016 RB1329 737a6dc02663894bb29bf6f0140f7f17 471 Pfam PF10531 SLBB domain 351 396 4.4E-6 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1329 737a6dc02663894bb29bf6f0140f7f17 471 Pfam PF02563 Polysaccharide biosynthesis/export protein 193 269 3.6E-15 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 RB1329 737a6dc02663894bb29bf6f0140f7f17 471 Pfam PF02563 Polysaccharide biosynthesis/export protein 293 335 1.3E-6 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 Gene3D G3DSA:3.30.70.1430 41 142 2.8E-21 T 11-11-2016 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 SUPERFAMILY SSF82866 322 514 1.57E-33 T 11-11-2016 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 Gene3D G3DSA:3.30.2090.10 195 274 9.9E-6 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB5117 2d92ae28893e3b8668f7431488aa3966 1109 SUPERFAMILY SSF82714 195 262 8.89E-5 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB5117 2d92ae28893e3b8668f7431488aa3966 1109 Pfam PF00873 AcrB/AcrD/AcrF family 6 646 3.4E-79 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 Pfam PF00873 AcrB/AcrD/AcrF family 755 1101 5.0E-55 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 SUPERFAMILY SSF82866 872 1106 1.44E-39 T 11-11-2016 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 Gene3D G3DSA:1.20.1640.10 306 522 7.8E-42 T 11-11-2016 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 Gene3D G3DSA:1.10.3850.10 877 1104 6.4E-49 T 11-11-2016 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 SUPERFAMILY SSF82714 789 869 9.94E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB5117 2d92ae28893e3b8668f7431488aa3966 1109 SUPERFAMILY SSF82693 167 193 5.13E-8 T 11-11-2016 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 SUPERFAMILY SSF82693 285 347 5.13E-8 T 11-11-2016 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 SUPERFAMILY SSF82693 41 134 2.96E-16 T 11-11-2016 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.9E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 1.9E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 PRINTS PR00702 Acriflavin resistance protein family signature 407 431 1.9E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.9E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 PRINTS PR00702 Acriflavin resistance protein family signature 353 376 1.9E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB5117 2d92ae28893e3b8668f7431488aa3966 1109 Gene3D G3DSA:3.30.2090.10 788 868 1.6E-6 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB10081 31957c62e9f04c484911eecf06223898 680 SMART SM00382 464 651 6.0E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10081 31957c62e9f04c484911eecf06223898 680 Gene3D G3DSA:1.20.1560.10 4 56 2.1E-60 T 11-11-2016 RB10081 31957c62e9f04c484911eecf06223898 680 Gene3D G3DSA:1.20.1560.10 142 426 2.1E-60 T 11-11-2016 RB10081 31957c62e9f04c484911eecf06223898 680 ProSitePatterns PS00211 ABC transporters family signature. 577 591 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB10081 31957c62e9f04c484911eecf06223898 680 SUPERFAMILY SSF52540 428 674 6.66E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10081 31957c62e9f04c484911eecf06223898 680 Pfam PF00664 ABC transporter transmembrane region 129 361 4.0E-41 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB10081 31957c62e9f04c484911eecf06223898 680 Gene3D G3DSA:3.40.50.300 438 668 2.8E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10081 31957c62e9f04c484911eecf06223898 680 SUPERFAMILY SSF90123 5 44 2.88E-57 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB10081 31957c62e9f04c484911eecf06223898 680 SUPERFAMILY SSF90123 137 426 2.88E-57 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB10081 31957c62e9f04c484911eecf06223898 680 Pfam PF00005 ABC transporter 455 605 8.1E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB8592 29075100adcd11f41557a197c4d6bc94 233 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 21 196 1.7E-39 T 11-11-2016 IPR018768 Domain of unknown function DUF2344 RB8592 29075100adcd11f41557a197c4d6bc94 233 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 21 224 6.5E-44 T 11-11-2016 IPR018768 Domain of unknown function DUF2344 RB3427 a0701e1c1452005dae74803148b00679 198 SUPERFAMILY SSF51283 7 175 9.95E-37 T 11-11-2016 IPR029054 dUTPase-like RB3427 a0701e1c1452005dae74803148b00679 198 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 7 173 24.451 T 11-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 RB3427 a0701e1c1452005dae74803148b00679 198 Gene3D G3DSA:2.70.40.10 7 175 1.3E-35 T 11-11-2016 IPR029054 dUTPase-like RB9765 0d380212d20d0b1514c469535bb585ec 833 Pfam PF00082 Subtilase family 291 621 6.6E-32 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB9765 0d380212d20d0b1514c469535bb585ec 833 Gene3D G3DSA:3.40.50.200 292 621 2.2E-23 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB9765 0d380212d20d0b1514c469535bb585ec 833 SUPERFAMILY SSF52743 290 479 3.53E-37 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB9765 0d380212d20d0b1514c469535bb585ec 833 SUPERFAMILY SSF52743 506 636 3.53E-37 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB5290 1b8985e722a5c6899d203c0601c6c870 478 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 66 183 8.8E-15 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB5290 1b8985e722a5c6899d203c0601c6c870 478 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 29 52 1.6E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RB5290 1b8985e722a5c6899d203c0601c6c870 478 Gene3D G3DSA:3.40.50.720 60 200 5.4E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5290 1b8985e722a5c6899d203c0601c6c870 478 SUPERFAMILY SSF55347 193 213 4.58E-9 T 11-11-2016 RB5290 1b8985e722a5c6899d203c0601c6c870 478 SUPERFAMILY SSF55347 260 376 4.58E-9 T 11-11-2016 RB5290 1b8985e722a5c6899d203c0601c6c870 478 SUPERFAMILY SSF51735 48 210 2.16E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5290 1b8985e722a5c6899d203c0601c6c870 478 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 30 53 1.1E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RB5290 1b8985e722a5c6899d203c0601c6c870 478 Gene3D G3DSA:3.30.360.10 201 450 1.3E-10 T 11-11-2016 RB531 c87e3fb1e8e939353a7288e16c815fbc 352 PIRSF PIRSF002825 3 352 1.7E-103 T 11-11-2016 IPR026045 Ferric binding protein RB531 c87e3fb1e8e939353a7288e16c815fbc 352 Pfam PF13343 Bacterial extracellular solute-binding protein 107 332 2.7E-19 T 11-11-2016 RB531 c87e3fb1e8e939353a7288e16c815fbc 352 Gene3D G3DSA:3.40.190.10 141 281 8.7E-34 T 11-11-2016 RB531 c87e3fb1e8e939353a7288e16c815fbc 352 SUPERFAMILY SSF53850 38 345 9.88E-54 T 11-11-2016 RB531 c87e3fb1e8e939353a7288e16c815fbc 352 Gene3D G3DSA:3.40.190.10 15 139 2.3E-30 T 11-11-2016 RB531 c87e3fb1e8e939353a7288e16c815fbc 352 Gene3D G3DSA:3.40.190.10 282 343 2.3E-30 T 11-11-2016 RB10202 b55f40b5d36eb71e68f4e18d444704f5 78 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 18 70 3.0E-10 T 11-11-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter RB6330 0e875964c45a2925e03dad313cb0fd0a 295 Gene3D G3DSA:2.120.10.30 42 88 2.4E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB6330 0e875964c45a2925e03dad313cb0fd0a 295 Gene3D G3DSA:2.120.10.30 210 284 2.4E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB6330 0e875964c45a2925e03dad313cb0fd0a 295 SUPERFAMILY SSF101898 42 284 2.62E-5 T 11-11-2016 RB5064 9c6dce2e33ac6bfe88799b1bcb3de6a0 648 Gene3D G3DSA:1.10.760.10 50 118 7.2E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5064 9c6dce2e33ac6bfe88799b1bcb3de6a0 648 Pfam PF07624 Protein of unknown function (DUF1585) 565 638 2.4E-21 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB5064 9c6dce2e33ac6bfe88799b1bcb3de6a0 648 Pfam PF07635 Planctomycete cytochrome C 53 99 1.6E-5 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB5064 9c6dce2e33ac6bfe88799b1bcb3de6a0 648 Pfam PF07626 Protein of unknown function (DUF1587) 143 207 8.7E-21 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB5064 9c6dce2e33ac6bfe88799b1bcb3de6a0 648 Pfam PF07637 Protein of unknown function (DUF1595) 229 289 8.3E-21 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB5064 9c6dce2e33ac6bfe88799b1bcb3de6a0 648 Pfam PF07631 Protein of unknown function (DUF1592) 300 428 6.2E-39 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB5064 9c6dce2e33ac6bfe88799b1bcb3de6a0 648 Pfam PF07627 Protein of unknown function (DUF1588) 454 551 8.4E-35 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB9019 78daed697e59e813fcd5069c42ac1f65 488 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 109 132 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB9019 78daed697e59e813fcd5069c42ac1f65 488 SUPERFAMILY SSF56112 100 429 1.75E-71 T 11-11-2016 IPR011009 Protein kinase-like domain RB9019 78daed697e59e813fcd5069c42ac1f65 488 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 222 234 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB9019 78daed697e59e813fcd5069c42ac1f65 488 SMART SM00220 103 360 3.6E-59 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9019 78daed697e59e813fcd5069c42ac1f65 488 Gene3D G3DSA:3.30.200.20 100 168 2.8E-18 T 11-11-2016 RB9019 78daed697e59e813fcd5069c42ac1f65 488 Gene3D G3DSA:1.10.510.10 169 355 2.1E-48 T 11-11-2016 RB9019 78daed697e59e813fcd5069c42ac1f65 488 Pfam PF00069 Protein kinase domain 103 354 3.2E-47 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9498 e4825d81146f7aa9f25ad78deec10bef 518 Gene3D G3DSA:3.40.720.10 24 405 6.9E-98 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9498 e4825d81146f7aa9f25ad78deec10bef 518 Pfam PF14707 C-terminal region of aryl-sulfatase 392 447 1.5E-6 T 11-11-2016 RB9498 e4825d81146f7aa9f25ad78deec10bef 518 SUPERFAMILY SSF53649 22 470 1.26E-115 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9498 e4825d81146f7aa9f25ad78deec10bef 518 Gene3D G3DSA:3.30.1120.10 406 447 1.8E-4 T 11-11-2016 RB9498 e4825d81146f7aa9f25ad78deec10bef 518 Pfam PF00884 Sulfatase 26 351 6.2E-61 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB12315 321d275e4485cb1b5df354536e432342 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 4.5E-10 T 11-11-2016 IPR001451 Hexapeptide repeat RB12315 321d275e4485cb1b5df354536e432342 184 Gene3D G3DSA:2.160.10.10 3 183 2.8E-60 T 11-11-2016 RB12315 321d275e4485cb1b5df354536e432342 184 SMART SM01266 5 59 5.1E-19 T 11-11-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RB12315 321d275e4485cb1b5df354536e432342 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RB12315 321d275e4485cb1b5df354536e432342 184 Pfam PF12464 Maltose acetyltransferase 7 57 3.9E-14 T 11-11-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RB12315 321d275e4485cb1b5df354536e432342 184 SUPERFAMILY SSF51161 2 183 1.36E-49 T 11-11-2016 IPR011004 Trimeric LpxA-like RB1898 a956f7629f11bbe330eb63bc2afb1472 428 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 90 418 2.9E-119 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RB1898 a956f7629f11bbe330eb63bc2afb1472 428 SUPERFAMILY SSF56796 63 420 1.31E-106 T 11-11-2016 RB1898 a956f7629f11bbe330eb63bc2afb1472 428 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 59 422 40.587 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RB1898 a956f7629f11bbe330eb63bc2afb1472 428 Gene3D G3DSA:3.40.50.1970 60 236 4.2E-62 T 11-11-2016 RB1898 a956f7629f11bbe330eb63bc2afb1472 428 Gene3D G3DSA:1.20.1090.10 237 420 7.6E-64 T 11-11-2016 RB1898 a956f7629f11bbe330eb63bc2afb1472 428 Pfam PF01761 3-dehydroquinate synthase 131 389 5.3E-105 T 11-11-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RB4911 10101ee523d57dc51093bc3889cd26da 228 PRINTS PR00123 ATP synthase A subunit signature 163 185 2.5E-16 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB4911 10101ee523d57dc51093bc3889cd26da 228 PRINTS PR00123 ATP synthase A subunit signature 207 222 2.5E-16 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB4911 10101ee523d57dc51093bc3889cd26da 228 PRINTS PR00123 ATP synthase A subunit signature 87 103 2.5E-16 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB4911 10101ee523d57dc51093bc3889cd26da 228 Pfam PF00119 ATP synthase A chain 29 220 2.0E-49 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB4911 10101ee523d57dc51093bc3889cd26da 228 Gene3D G3DSA:1.20.120.220 83 224 2.3E-38 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB4911 10101ee523d57dc51093bc3889cd26da 228 Hamap MF_01393 ATP synthase subunit a [atpB]. 4 227 14.478 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB4911 10101ee523d57dc51093bc3889cd26da 228 ProSitePatterns PS00449 ATP synthase a subunit signature. 166 175 - T 11-11-2016 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 RB4911 10101ee523d57dc51093bc3889cd26da 228 TIGRFAM TIGR03306 altF1_A: alternate F1F0 ATPase, F0 subunit A 6 225 1.0E-115 T 11-11-2016 IPR017692 Alternate F1F0 ATPase, F0 subunit A RB4911 10101ee523d57dc51093bc3889cd26da 228 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 25 223 3.2E-37 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB4911 10101ee523d57dc51093bc3889cd26da 228 SUPERFAMILY SSF81336 81 220 3.79E-37 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 RB11670 f6963373c9b7aed28e99c4818ed0cf75 378 SUPERFAMILY SSF53474 113 370 6.36E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11670 f6963373c9b7aed28e99c4818ed0cf75 378 Pfam PF00756 Putative esterase 116 368 1.6E-13 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 RB11670 f6963373c9b7aed28e99c4818ed0cf75 378 Gene3D G3DSA:3.40.50.1820 113 373 1.8E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 SMART SM01079 90 282 2.2E-79 T 11-11-2016 IPR006189 CHASE domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 Pfam PF03924 CHASE domain 93 280 1.4E-58 T 11-11-2016 IPR006189 CHASE domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 Pfam PF00512 His Kinase A (phospho-acceptor) domain 500 564 3.0E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 SUPERFAMILY SSF55785 363 476 1.92E-17 T 11-11-2016 IPR000014 PAS domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 SMART SM00388 498 566 1.7E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 Pfam PF13426 PAS domain 384 477 1.3E-13 T 11-11-2016 IPR000014 PAS domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 SUPERFAMILY SSF47384 485 563 2.35E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 657 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 695 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 714 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 671 2.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 SMART SM00387 605 717 1.6E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 715 8.9E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 Gene3D G3DSA:3.30.450.20 369 476 2.5E-17 T 11-11-2016 RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 SMART SM00091 373 438 2.6E-4 T 11-11-2016 IPR000014 PAS domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 Gene3D G3DSA:3.30.565.10 552 715 3.2E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 371 480 3.4E-15 T 11-11-2016 IPR000014 PAS domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 SUPERFAMILY SSF55874 555 715 2.23E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9418 0808338f6a2816ab5de6eba31b3e58ae 734 Gene3D G3DSA:1.10.287.130 490 551 1.2E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SUPERFAMILY SSF50998 1333 1359 3.53E-52 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SUPERFAMILY SSF50998 1633 1916 3.53E-52 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SUPERFAMILY SSF50998 1392 1528 3.53E-52 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Gene3D G3DSA:2.130.10.10 1141 1383 7.2E-33 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SUPERFAMILY SSF56112 274 548 2.29E-50 T 11-11-2016 IPR011009 Protein kinase-like domain RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Pfam PF00069 Protein kinase domain 285 513 5.4E-31 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Pfam PF00400 WD domain, G-beta repeat 1879 1915 8.9E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Pfam PF00400 WD domain, G-beta repeat 1790 1810 0.23 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Pfam PF00400 WD domain, G-beta repeat 1688 1719 0.0039 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Pfam PF00400 WD domain, G-beta repeat 1404 1440 0.0021 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Pfam PF00400 WD domain, G-beta repeat 1259 1287 0.021 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Pfam PF00400 WD domain, G-beta repeat 1831 1863 0.041 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Pfam PF00400 WD domain, G-beta repeat 967 998 0.0015 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Gene3D G3DSA:2.130.10.10 1384 1578 3.6E-23 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1706 1720 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 1337 1351 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1057 1098 0.66 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1250 1289 0.002 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 960 998 4.8E-6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1128 1170 5.7 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1824 1863 6.2E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1678 1719 2.5E-6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1005 1049 120.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1877 1916 9.5E-5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1310 1350 7.6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1639 1675 0.49 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1769 1810 1.2 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 914 957 66.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1353 1393 93.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1182 1222 0.33 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1726 1767 130.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00320 1401 1440 2.1E-6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Gene3D G3DSA:2.130.10.10 928 1097 1.9E-23 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Gene3D G3DSA:2.130.10.10 1579 1800 2.8E-29 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SUPERFAMILY SSF50998 1085 1107 5.73E-46 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SUPERFAMILY SSF50998 1181 1445 5.73E-46 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SUPERFAMILY SSF50998 905 999 5.73E-46 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SUPERFAMILY SSF50998 1026 1034 5.73E-46 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 SMART SM00220 285 556 8.3E-30 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 416 428 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Gene3D G3DSA:1.10.510.10 408 558 2.6E-30 T 11-11-2016 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Gene3D G3DSA:2.130.10.10 1801 1915 2.8E-20 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 291 314 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 985 999 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 PRINTS PR00320 G protein beta WD-40 repeat signature 1706 1720 4.8E-6 T 11-11-2016 IPR020472 G-protein beta WD-40 repeat RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 PRINTS PR00320 G protein beta WD-40 repeat signature 985 999 4.8E-6 T 11-11-2016 IPR020472 G-protein beta WD-40 repeat RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 PRINTS PR00320 G protein beta WD-40 repeat signature 1337 1351 4.8E-6 T 11-11-2016 IPR020472 G-protein beta WD-40 repeat RB9317 f3c3506dbbe57c70a5a98ec371a1daeb 1922 Gene3D G3DSA:3.30.200.20 269 407 4.9E-20 T 11-11-2016 RB7633 6b0ed78f9cad7ccf906e81125ba5df9f 273 Pfam PF00005 ABC transporter 23 165 1.5E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB7633 6b0ed78f9cad7ccf906e81125ba5df9f 273 SMART SM00382 31 216 6.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7633 6b0ed78f9cad7ccf906e81125ba5df9f 273 SUPERFAMILY SSF52540 2 228 1.09E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7633 6b0ed78f9cad7ccf906e81125ba5df9f 273 Gene3D G3DSA:3.40.50.300 1 232 1.8E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3876 31ac86766d402e9bb69613b296f597a1 496 SUPERFAMILY SSF53649 34 457 1.41E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3876 31ac86766d402e9bb69613b296f597a1 496 Gene3D G3DSA:3.30.1120.10 410 466 4.3E-11 T 11-11-2016 RB3876 31ac86766d402e9bb69613b296f597a1 496 Pfam PF00884 Sulfatase 35 347 1.1E-64 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3876 31ac86766d402e9bb69613b296f597a1 496 Gene3D G3DSA:3.40.720.10 34 409 9.8E-106 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7468 35efd710204290c13da63d03d4d9f149 327 Hamap MF_01576 Bifunctional protein FolD [folD]. 30 324 39.024 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 103 128 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 Gene3D G3DSA:3.40.192.10 34 172 3.9E-47 T 11-11-2016 RB7468 35efd710204290c13da63d03d4d9f149 327 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 33 154 4.9E-38 T 11-11-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 SUPERFAMILY SSF51735 156 322 1.27E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7468 35efd710204290c13da63d03d4d9f149 327 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 158 323 6.8E-73 T 11-11-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 SUPERFAMILY SSF53223 28 154 7.29E-36 T 11-11-2016 RB7468 35efd710204290c13da63d03d4d9f149 327 Gene3D G3DSA:3.40.50.720 173 305 6.1E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7468 35efd710204290c13da63d03d4d9f149 327 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 275 2.2E-71 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 297 315 2.2E-71 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 280 296 2.2E-71 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 102 129 2.2E-71 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 188 208 2.2E-71 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7468 35efd710204290c13da63d03d4d9f149 327 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 61 83 2.2E-71 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RB7728 ca123f347daf2f551c9cc921b581721c 163 Pfam PF14317 YcxB-like protein 95 155 3.5E-13 T 11-11-2016 IPR025588 YcxB-like protein RB5025 1f2635b51b9b6cddcf59c20c36db5bb4 505 Gene3D G3DSA:3.90.70.10 108 319 7.0E-21 T 11-11-2016 RB5025 1f2635b51b9b6cddcf59c20c36db5bb4 505 SUPERFAMILY SSF54001 108 324 1.89E-24 T 11-11-2016 RB5025 1f2635b51b9b6cddcf59c20c36db5bb4 505 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 272 282 - T 11-11-2016 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 RB5025 1f2635b51b9b6cddcf59c20c36db5bb4 505 Pfam PF00112 Papain family cysteine protease 114 310 1.2E-7 T 11-11-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 RB8174 dc1b7671c989c6a5fdd72e2def112f9b 369 Pfam PF01882 Protein of unknown function DUF58 100 184 1.6E-20 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB8174 dc1b7671c989c6a5fdd72e2def112f9b 369 Gene3D G3DSA:3.40.50.410 142 279 1.2E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8174 dc1b7671c989c6a5fdd72e2def112f9b 369 SMART SM00327 138 311 4.4E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8174 dc1b7671c989c6a5fdd72e2def112f9b 369 SUPERFAMILY SSF53300 135 294 8.74E-19 T 11-11-2016 IPR002035 von Willebrand factor, type A RB11016 66055074b9971852c54704a50ba0b4fb 369 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 33 53 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11016 66055074b9971852c54704a50ba0b4fb 369 Gene3D G3DSA:3.30.700.10 35 95 1.1E-6 T 11-11-2016 RB11016 66055074b9971852c54704a50ba0b4fb 369 Pfam PF07596 Protein of unknown function (DUF1559) 59 348 7.1E-62 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB11016 66055074b9971852c54704a50ba0b4fb 369 Pfam PF13633 Prokaryotic N-terminal methylation site 33 58 5.3E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11016 66055074b9971852c54704a50ba0b4fb 369 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 33 54 1.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11016 66055074b9971852c54704a50ba0b4fb 369 SUPERFAMILY SSF54523 35 161 8.63E-23 T 11-11-2016 RB3898 7368ff574cf87bd2412427fa27d0aa9f 243 Gene3D G3DSA:3.40.630.20 51 240 3.7E-37 T 11-11-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RB3898 7368ff574cf87bd2412427fa27d0aa9f 243 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 53 76 2.3E-12 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RB3898 7368ff574cf87bd2412427fa27d0aa9f 243 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 199 211 2.3E-12 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RB3898 7368ff574cf87bd2412427fa27d0aa9f 243 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 169 185 2.3E-12 T 11-11-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RB3898 7368ff574cf87bd2412427fa27d0aa9f 243 SUPERFAMILY SSF53182 51 240 1.09E-42 T 11-11-2016 RB3898 7368ff574cf87bd2412427fa27d0aa9f 243 Pfam PF01470 Pyroglutamyl peptidase 52 239 1.2E-32 T 11-11-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 SUPERFAMILY SSF52540 12 243 6.28E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 SUPERFAMILY SSF52540 255 493 2.57E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 PRINTS PR01874 DNA repair protein radA signature 309 326 4.7E-9 T 11-11-2016 RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 PRINTS PR01874 DNA repair protein radA signature 267 295 4.7E-9 T 11-11-2016 RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 PRINTS PR01874 DNA repair protein radA signature 413 441 4.7E-9 T 11-11-2016 RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 Pfam PF06745 KaiC 18 244 5.5E-36 T 11-11-2016 IPR014774 KaiC-like domain RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 Pfam PF06745 KaiC 259 482 4.7E-26 T 11-11-2016 IPR014774 KaiC-like domain RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 Gene3D G3DSA:3.40.50.300 10 244 1.4E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 Gene3D G3DSA:3.40.50.300 250 496 1.5E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 PIRSF PIRSF039117 5 507 1.4E-111 T 11-11-2016 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 SMART SM00382 275 444 1.9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB13180 e1ff05f9e3d32a93eb8638bd3d4ab643 511 SMART SM00382 35 261 0.13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7408 7b118c356c2aed473df54981ec97cdf2 495 Gene3D G3DSA:3.30.750.44 64 112 1.3E-4 T 11-11-2016 RB7408 7b118c356c2aed473df54981ec97cdf2 495 Gene3D G3DSA:2.30.42.10 113 190 1.6E-20 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7408 7b118c356c2aed473df54981ec97cdf2 495 SMART SM00245 181 394 1.4E-58 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RB7408 7b118c356c2aed473df54981ec97cdf2 495 Gene3D G3DSA:3.90.226.10 191 396 8.7E-54 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB7408 7b118c356c2aed473df54981ec97cdf2 495 Gene3D G3DSA:3.90.226.10 464 487 8.7E-54 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB7408 7b118c356c2aed473df54981ec97cdf2 495 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 66 376 1.4E-79 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RB7408 7b118c356c2aed473df54981ec97cdf2 495 Pfam PF03572 Peptidase family S41 218 379 5.7E-47 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RB7408 7b118c356c2aed473df54981ec97cdf2 495 Pfam PF13180 PDZ domain 109 188 1.0E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7408 7b118c356c2aed473df54981ec97cdf2 495 SUPERFAMILY SSF50156 80 195 2.66E-18 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7408 7b118c356c2aed473df54981ec97cdf2 495 SMART SM00228 108 181 4.2E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7408 7b118c356c2aed473df54981ec97cdf2 495 SUPERFAMILY SSF52096 212 375 9.77E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB7408 7b118c356c2aed473df54981ec97cdf2 495 SUPERFAMILY SSF52096 51 128 9.77E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB1147 b2da6d050702769a6b4e475ba7d19525 458 Gene3D G3DSA:3.30.450.90 92 189 4.4E-33 T 11-11-2016 RB1147 b2da6d050702769a6b4e475ba7d19525 458 Gene3D G3DSA:3.40.50.300 193 415 4.9E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1147 b2da6d050702769a6b4e475ba7d19525 458 Pfam PF00437 Type II/IV secretion system protein 95 371 1.9E-80 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB1147 b2da6d050702769a6b4e475ba7d19525 458 SUPERFAMILY SSF52540 79 378 1.2E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7425 40f5964fab3a4890f20f02b71ff8bab9 409 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 52 408 8.0E-96 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RB7425 40f5964fab3a4890f20f02b71ff8bab9 409 Hamap MF_00569 Quinolinate synthase A [nadA]. 50 408 51.071 T 11-11-2016 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RB7425 40f5964fab3a4890f20f02b71ff8bab9 409 SUPERFAMILY SSF142754 59 407 1.44E-93 T 11-11-2016 RB7425 40f5964fab3a4890f20f02b71ff8bab9 409 Pfam PF02445 Quinolinate synthetase A protein 56 407 1.8E-105 T 11-11-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RB6272 20342736cc0a2c4b733b075d31e7b4e3 345 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 345 68.051 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RB6272 20342736cc0a2c4b733b075d31e7b4e3 345 Gene3D G3DSA:3.40.47.10 161 345 3.0E-49 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB6272 20342736cc0a2c4b733b075d31e7b4e3 345 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 175 2.1E-23 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RB6272 20342736cc0a2c4b733b075d31e7b4e3 345 Gene3D G3DSA:3.40.47.10 4 160 7.8E-56 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB6272 20342736cc0a2c4b733b075d31e7b4e3 345 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 256 345 5.2E-36 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RB6272 20342736cc0a2c4b733b075d31e7b4e3 345 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 345 4.4E-99 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RB6272 20342736cc0a2c4b733b075d31e7b4e3 345 SUPERFAMILY SSF53901 5 345 5.44E-68 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB7424 21b382bfd3f1e6125a5951a2290dcb5a 419 PIRSF PIRSF005572 18 418 9.8E-54 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RB7424 21b382bfd3f1e6125a5951a2290dcb5a 419 Pfam PF00266 Aminotransferase class-V 21 404 1.7E-74 T 11-11-2016 IPR000192 Aminotransferase class V domain RB7424 21b382bfd3f1e6125a5951a2290dcb5a 419 SUPERFAMILY SSF53383 16 413 2.69E-83 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB7424 21b382bfd3f1e6125a5951a2290dcb5a 419 Gene3D G3DSA:3.90.1150.10 290 411 8.5E-10 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB7424 21b382bfd3f1e6125a5951a2290dcb5a 419 Gene3D G3DSA:3.40.640.10 36 289 2.3E-65 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB6034 e623639ddf82e699b559643f028292df 209 SUPERFAMILY SSF88659 120 204 3.74E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6034 e623639ddf82e699b559643f028292df 209 Pfam PF04545 Sigma-70, region 4 152 201 1.5E-10 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6034 e623639ddf82e699b559643f028292df 209 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 203 2.7E-21 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6034 e623639ddf82e699b559643f028292df 209 Gene3D G3DSA:1.10.10.10 141 205 8.9E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6034 e623639ddf82e699b559643f028292df 209 TIGRFAM TIGR02984 Sig-70_plancto1: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 19 203 6.2E-73 T 11-11-2016 IPR014326 RNA polymerase sigma-70 factor, Planctomycetaceae RB6034 e623639ddf82e699b559643f028292df 209 SUPERFAMILY SSF88946 7 111 4.71E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6034 e623639ddf82e699b559643f028292df 209 Gene3D G3DSA:1.10.1740.10 12 111 1.2E-15 T 11-11-2016 RB6034 e623639ddf82e699b559643f028292df 209 Pfam PF04542 Sigma-70 region 2 33 103 2.3E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12756 01caf73cdb524300271882b4299805bd 562 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 50 558 43.037 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB12756 01caf73cdb524300271882b4299805bd 562 Pfam PF08502 LeuA allosteric (dimerisation) domain 417 548 3.0E-28 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB12756 01caf73cdb524300271882b4299805bd 562 Pfam PF00682 HMGL-like 53 321 1.8E-100 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RB12756 01caf73cdb524300271882b4299805bd 562 SUPERFAMILY SSF51569 49 339 3.85E-104 T 11-11-2016 RB12756 01caf73cdb524300271882b4299805bd 562 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 52 546 5.9E-218 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB12756 01caf73cdb524300271882b4299805bd 562 SMART SM00917 417 549 1.2E-30 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB12756 01caf73cdb524300271882b4299805bd 562 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 60 76 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB12756 01caf73cdb524300271882b4299805bd 562 Gene3D G3DSA:3.20.20.70 44 394 2.7E-151 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB12756 01caf73cdb524300271882b4299805bd 562 SUPERFAMILY SSF110921 438 548 3.14E-18 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB12756 01caf73cdb524300271882b4299805bd 562 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 247 260 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB9832 67c88e004c484260f8d74e37b549969f 480 SUPERFAMILY SSF53738 292 397 2.75E-18 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 478 6.5E-7 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 SUPERFAMILY SSF53738 187 288 4.71E-19 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 TIGRFAM TIGR03990 Arch_GlmM: phosphoglucosamine mutase 37 478 4.9E-148 T 11-11-2016 IPR024086 Phosphoglucosamine mutase, archaeal type GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 223 3.2E-9 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 123 137 3.2E-9 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 265 280 3.2E-9 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 Gene3D G3DSA:3.40.120.10 205 283 2.1E-17 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 186 285 5.1E-19 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 SUPERFAMILY SSF55957 388 479 6.8E-15 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 Gene3D G3DSA:3.40.120.10 38 178 2.2E-33 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 124 133 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 SUPERFAMILY SSF53738 33 173 1.06E-36 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 Gene3D G3DSA:3.30.310.50 411 479 6.5E-15 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 293 399 3.4E-17 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 Gene3D G3DSA:3.40.120.10 284 399 3.9E-20 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB9832 67c88e004c484260f8d74e37b549969f 480 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 166 3.0E-33 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6196 7693996bf56a587d06eaf518bd48b33a 502 SUPERFAMILY SSF53649 28 453 1.26E-103 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6196 7693996bf56a587d06eaf518bd48b33a 502 Gene3D G3DSA:3.40.720.10 26 387 2.7E-82 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB6196 7693996bf56a587d06eaf518bd48b33a 502 Pfam PF00884 Sulfatase 29 368 7.5E-45 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB6196 7693996bf56a587d06eaf518bd48b33a 502 Gene3D G3DSA:3.30.1120.10 395 453 2.7E-11 T 11-11-2016 RB6196 7693996bf56a587d06eaf518bd48b33a 502 ProSitePatterns PS00149 Sulfatases signature 2. 122 133 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB6196 7693996bf56a587d06eaf518bd48b33a 502 Pfam PF16347 Domain of unknown function (DUF4976) 403 451 2.9E-7 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB5972 44db064bc4cb9ae733477c897027d18d 522 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB5972 44db064bc4cb9ae733477c897027d18d 522 Gene3D G3DSA:3.40.50.300 273 500 2.2E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5972 44db064bc4cb9ae733477c897027d18d 522 SUPERFAMILY SSF52540 273 489 2.52E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5972 44db064bc4cb9ae733477c897027d18d 522 SMART SM00382 29 218 1.7E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5972 44db064bc4cb9ae733477c897027d18d 522 SMART SM00382 283 488 2.9E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5972 44db064bc4cb9ae733477c897027d18d 522 Pfam PF00005 ABC transporter 20 170 7.7E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB5972 44db064bc4cb9ae733477c897027d18d 522 Pfam PF00005 ABC transporter 274 430 3.6E-18 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB5972 44db064bc4cb9ae733477c897027d18d 522 Gene3D G3DSA:3.40.50.300 2 234 4.1E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5972 44db064bc4cb9ae733477c897027d18d 522 SUPERFAMILY SSF52540 4 229 1.81E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB321 88de5a2a7da972073e0b9624568cc746 251 SUPERFAMILY SSF52172 41 183 2.28E-27 T 11-11-2016 IPR011006 CheY-like superfamily RB321 88de5a2a7da972073e0b9624568cc746 251 SUPERFAMILY SSF46894 164 233 4.42E-15 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB321 88de5a2a7da972073e0b9624568cc746 251 SMART SM00448 40 151 7.6E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB321 88de5a2a7da972073e0b9624568cc746 251 Pfam PF00072 Response regulator receiver domain 42 152 2.2E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB321 88de5a2a7da972073e0b9624568cc746 251 Gene3D G3DSA:3.40.50.2300 42 179 3.7E-30 T 11-11-2016 RB321 88de5a2a7da972073e0b9624568cc746 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 231 1.5E-13 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB321 88de5a2a7da972073e0b9624568cc746 251 SMART SM00421 175 232 2.4E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB321 88de5a2a7da972073e0b9624568cc746 251 Gene3D G3DSA:1.10.10.10 180 234 2.6E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB321 88de5a2a7da972073e0b9624568cc746 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 1.3E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB321 88de5a2a7da972073e0b9624568cc746 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 1.3E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB321 88de5a2a7da972073e0b9624568cc746 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 1.3E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB8134 f30518df2c804b086cea7fc33f3effd5 439 SUPERFAMILY SSF52540 15 232 8.86E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8134 f30518df2c804b086cea7fc33f3effd5 439 Gene3D G3DSA:1.10.8.60 157 239 9.4E-12 T 11-11-2016 RB8134 f30518df2c804b086cea7fc33f3effd5 439 SMART SM00382 51 168 1.3E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain RB8134 f30518df2c804b086cea7fc33f3effd5 439 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 18 140 1.1E-15 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RB8134 f30518df2c804b086cea7fc33f3effd5 439 Gene3D G3DSA:1.10.3710.10 349 434 7.8E-20 T 11-11-2016 RB8134 f30518df2c804b086cea7fc33f3effd5 439 Gene3D G3DSA:3.40.50.300 15 156 7.5E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8134 f30518df2c804b086cea7fc33f3effd5 439 Gene3D G3DSA:1.20.272.10 250 347 4.5E-44 T 11-11-2016 RB8134 f30518df2c804b086cea7fc33f3effd5 439 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 430 3.4E-61 T 11-11-2016 IPR021886 MgsA AAA+ ATPase C-terminal RB8134 f30518df2c804b086cea7fc33f3effd5 439 Pfam PF16193 AAA C-terminal domain 190 267 3.3E-24 T 11-11-2016 IPR032423 AAA ATPase, C-terminal domain RB8134 f30518df2c804b086cea7fc33f3effd5 439 SUPERFAMILY SSF48019 253 432 7.37E-65 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 Gene3D G3DSA:1.10.10.60 318 368 1.8E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 SUPERFAMILY SSF53822 49 294 3.85E-31 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 SMART SM00342 335 418 5.8E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 SUPERFAMILY SSF46689 373 420 1.25E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 SUPERFAMILY SSF46689 320 366 2.51E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 Pfam PF12833 Helix-turn-helix domain 345 419 1.9E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 Gene3D G3DSA:1.10.10.60 373 427 2.8E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 Pfam PF13377 Periplasmic binding protein-like domain 142 311 2.3E-36 T 11-11-2016 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 Gene3D G3DSA:3.40.50.2300 145 290 6.5E-28 T 11-11-2016 RB1454 4b30f57845c470eb2dc9d7e8bc8c57b1 438 Gene3D G3DSA:3.40.50.2300 47 144 7.2E-11 T 11-11-2016 RB10027 4c99d397bf6af1432fba4dbd3a04d765 1115 Gene3D G3DSA:3.90.260.10 177 248 5.1E-9 T 11-11-2016 IPR002931 Transglutaminase-like RB10027 4c99d397bf6af1432fba4dbd3a04d765 1115 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1113 0.0 T 11-11-2016 IPR018667 Domain of unknown function DUF2126 RB10027 4c99d397bf6af1432fba4dbd3a04d765 1115 SMART SM00460 172 248 1.2E-16 T 11-11-2016 IPR002931 Transglutaminase-like RB10027 4c99d397bf6af1432fba4dbd3a04d765 1115 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 83 1.5E-23 T 11-11-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RB10027 4c99d397bf6af1432fba4dbd3a04d765 1115 SUPERFAMILY SSF54001 8 337 2.24E-67 T 11-11-2016 RB10027 4c99d397bf6af1432fba4dbd3a04d765 1115 Pfam PF01841 Transglutaminase-like superfamily 141 246 3.3E-16 T 11-11-2016 IPR002931 Transglutaminase-like RB13073 c49c920dae37209f37580d662dd8d882 469 SUPERFAMILY SSF52540 96 419 4.38E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13073 c49c920dae37209f37580d662dd8d882 469 Pfam PF00437 Type II/IV secretion system protein 116 392 3.5E-85 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB13073 c49c920dae37209f37580d662dd8d882 469 Gene3D G3DSA:3.40.50.300 217 439 1.5E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13073 c49c920dae37209f37580d662dd8d882 469 Gene3D G3DSA:3.30.450.90 113 210 5.7E-38 T 11-11-2016 RB577 44ecaf38c954adb6912e2b9e94a35368 703 Pfam PF07595 Planctomycete extracellular 41 63 5.3E-5 T 11-11-2016 IPR011506 Planctomycete extracellular RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 472 493 420.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 280 306 540.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 418 440 3400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 446 467 3100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 339 360 4700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 525 547 6300.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 258 279 1900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 548 574 2200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 204 226 3700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 579 600 4900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 392 413 3000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SMART SM00710 232 253 2000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB577 44ecaf38c954adb6912e2b9e94a35368 703 SUPERFAMILY SSF51126 326 545 7.54E-15 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB577 44ecaf38c954adb6912e2b9e94a35368 703 SUPERFAMILY SSF51126 72 349 6.57E-25 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB577 44ecaf38c954adb6912e2b9e94a35368 703 SUPERFAMILY SSF51126 472 682 6.04E-12 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB577 44ecaf38c954adb6912e2b9e94a35368 703 Gene3D G3DSA:2.160.20.10 603 685 1.1E-4 T 11-11-2016 IPR012334 Pectin lyase fold RB577 44ecaf38c954adb6912e2b9e94a35368 703 Gene3D G3DSA:2.160.20.10 425 602 6.6E-19 T 11-11-2016 IPR012334 Pectin lyase fold RB577 44ecaf38c954adb6912e2b9e94a35368 703 Gene3D G3DSA:2.160.20.10 76 302 2.0E-22 T 11-11-2016 IPR012334 Pectin lyase fold RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 Pfam PF00204 DNA gyrase B 224 393 1.8E-50 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 Gene3D G3DSA:3.30.565.10 8 219 4.9E-81 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 SUPERFAMILY SSF56719 397 630 9.68E-77 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 178 1.0E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 Pfam PF01751 Toprim domain 422 522 2.1E-16 T 11-11-2016 IPR006171 Toprim domain RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 SUPERFAMILY SSF54211 224 393 6.64E-45 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 SMART SM00387 33 179 1.3E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 73 86 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 527 539 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 507 524 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 489 505 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 272 285 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 116 130 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 569 585 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR00418 DNA topoisomerase II family signature 423 437 1.9E-65 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 Gene3D G3DSA:3.30.230.10 223 393 6.3E-51 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 SMART SM00433 37 630 1.3E-270 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 184 199 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 473 482 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 590 602 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 606 622 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 246 264 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 377 397 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 199 212 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 8 18 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 315 331 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 PRINTS PR01159 DNA gyrase subunit B signature 363 377 2.1E-38 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 565 625 1.0E-23 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 ProSitePatterns PS00177 DNA topoisomerase II signature. 425 433 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 SUPERFAMILY SSF55874 7 219 3.01E-65 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3466 d08c56f5bc2342f2fc6f8e2d145f281d 637 Gene3D G3DSA:3.40.50.670 407 617 1.5E-79 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3770 301c7c0712dcf109539756b2fb3a545f 349 SUPERFAMILY SSF51735 7 153 1.64E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3770 301c7c0712dcf109539756b2fb3a545f 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 13 127 5.1E-26 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB3770 301c7c0712dcf109539756b2fb3a545f 349 Gene3D G3DSA:3.40.50.720 7 143 2.1E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3770 301c7c0712dcf109539756b2fb3a545f 349 SUPERFAMILY SSF55347 133 276 5.72E-17 T 11-11-2016 RB3770 301c7c0712dcf109539756b2fb3a545f 349 Gene3D G3DSA:3.30.360.10 144 344 5.5E-22 T 11-11-2016 RB11594 44ccdec2c983448a3733461cbfcae482 168 Pfam PF00072 Response regulator receiver domain 47 157 4.1E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11594 44ccdec2c983448a3733461cbfcae482 168 SMART SM00448 44 157 4.2E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11594 44ccdec2c983448a3733461cbfcae482 168 Gene3D G3DSA:3.40.50.2300 38 163 2.2E-26 T 11-11-2016 RB11594 44ccdec2c983448a3733461cbfcae482 168 SUPERFAMILY SSF52172 43 162 8.97E-28 T 11-11-2016 IPR011006 CheY-like superfamily RB92 dce06de52f97ab07c6fe1880280e314a 685 SUPERFAMILY SSF49899 459 680 1.25E-20 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB92 dce06de52f97ab07c6fe1880280e314a 685 Gene3D G3DSA:2.60.120.200 454 681 3.1E-20 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB92 dce06de52f97ab07c6fe1880280e314a 685 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 508 680 2.0E-14 T 11-11-2016 RB92 dce06de52f97ab07c6fe1880280e314a 685 SUPERFAMILY SSF56300 155 440 2.34E-15 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB92 dce06de52f97ab07c6fe1880280e314a 685 Gene3D G3DSA:3.60.21.10 168 441 1.9E-10 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB92 dce06de52f97ab07c6fe1880280e314a 685 Pfam PF09423 PhoD-like phosphatase 186 370 1.0E-18 T 11-11-2016 IPR018946 Alkaline phosphatase D-related RB11294 92aef543a1f4a8d02b263a26651367cf 1283 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 565 667 4.1E-25 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RB11294 92aef543a1f4a8d02b263a26651367cf 1283 SUPERFAMILY SSF160246 534 666 3.01E-31 T 11-11-2016 RB8939 b565633282423d2e75ebb211045003be 115 Gene3D G3DSA:1.10.10.10 20 109 3.5E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8939 b565633282423d2e75ebb211045003be 115 Pfam PF12840 Helix-turn-helix domain 33 89 6.5E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8939 b565633282423d2e75ebb211045003be 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 80 95 7.2E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB8939 b565633282423d2e75ebb211045003be 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 7.2E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB8939 b565633282423d2e75ebb211045003be 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 33 48 7.2E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB8939 b565633282423d2e75ebb211045003be 115 SMART SM00418 31 112 7.0E-20 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB8939 b565633282423d2e75ebb211045003be 115 SUPERFAMILY SSF46785 26 108 4.54E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6288 a020a817c0acd82d8d260819f8f20e7b 850 Pfam PF07587 Protein of unknown function (DUF1553) 558 815 1.9E-80 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB6288 a020a817c0acd82d8d260819f8f20e7b 850 Pfam PF07583 Protein of unknown function (DUF1549) 197 403 5.7E-88 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB6288 a020a817c0acd82d8d260819f8f20e7b 850 Pfam PF07635 Planctomycete cytochrome C 66 125 2.4E-18 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB6288 a020a817c0acd82d8d260819f8f20e7b 850 Gene3D G3DSA:1.10.760.10 40 141 8.7E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6288 a020a817c0acd82d8d260819f8f20e7b 850 SUPERFAMILY SSF46626 35 143 1.72E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12882 d482a3afc89827b66902cba36159e4a3 334 Gene3D G3DSA:1.25.40.10 119 173 2.1E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12882 d482a3afc89827b66902cba36159e4a3 334 Gene3D G3DSA:1.25.40.10 10 46 2.1E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12882 d482a3afc89827b66902cba36159e4a3 334 SUPERFAMILY SSF48452 119 174 1.45E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4179 1db9987116da191190bf217870b1bd6e 757 SUPERFAMILY SSF52540 433 664 6.88E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4179 1db9987116da191190bf217870b1bd6e 757 Gene3D G3DSA:3.40.50.300 432 605 6.7E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4179 1db9987116da191190bf217870b1bd6e 757 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 735 755 4.4E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB4179 1db9987116da191190bf217870b1bd6e 757 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 718 735 4.4E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB4179 1db9987116da191190bf217870b1bd6e 757 SMART SM00240 47 101 1.2E-10 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB4179 1db9987116da191190bf217870b1bd6e 757 SMART SM00382 453 596 6.3E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB4179 1db9987116da191190bf217870b1bd6e 757 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 457 470 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB4179 1db9987116da191190bf217870b1bd6e 757 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 646 655 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB4179 1db9987116da191190bf217870b1bd6e 757 Pfam PF00158 Sigma-54 interaction domain 433 599 2.0E-67 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB4179 1db9987116da191190bf217870b1bd6e 757 Gene3D G3DSA:1.10.10.60 657 751 3.2E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4179 1db9987116da191190bf217870b1bd6e 757 SUPERFAMILY SSF46689 646 751 1.79E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4179 1db9987116da191190bf217870b1bd6e 757 Pfam PF00498 FHA domain 48 115 6.0E-14 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB4179 1db9987116da191190bf217870b1bd6e 757 Pfam PF02954 Bacterial regulatory protein, Fis family 711 751 4.4E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB4179 1db9987116da191190bf217870b1bd6e 757 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 519 534 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB4179 1db9987116da191190bf217870b1bd6e 757 Gene3D G3DSA:1.10.8.60 606 656 1.2E-21 T 11-11-2016 RB4179 1db9987116da191190bf217870b1bd6e 757 Gene3D G3DSA:3.30.450.40 222 412 2.8E-5 T 11-11-2016 IPR029016 GAF domain-like RB4179 1db9987116da191190bf217870b1bd6e 757 Gene3D G3DSA:2.60.200.20 19 123 7.9E-20 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB4179 1db9987116da191190bf217870b1bd6e 757 SUPERFAMILY SSF49879 14 123 1.26E-21 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB1836 16323cd4ef865559f1ad9f0b14c33889 213 PIRSF PIRSF006102 1 213 1.8E-59 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 RB1836 16323cd4ef865559f1ad9f0b14c33889 213 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 2 213 29.301 T 11-11-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 RB1836 16323cd4ef865559f1ad9f0b14c33889 213 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 211 8.6E-58 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 RB1836 16323cd4ef865559f1ad9f0b14c33889 213 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 212 1.0E-100 T 11-11-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 RB9745 066cf83f5eb42a4a813f12d299cb5fa1 656 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 109 132 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB9745 066cf83f5eb42a4a813f12d299cb5fa1 656 Pfam PF00069 Protein kinase domain 103 376 3.4E-49 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9745 066cf83f5eb42a4a813f12d299cb5fa1 656 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 222 234 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB9745 066cf83f5eb42a4a813f12d299cb5fa1 656 SUPERFAMILY SSF56112 100 389 2.56E-69 T 11-11-2016 IPR011009 Protein kinase-like domain RB9745 066cf83f5eb42a4a813f12d299cb5fa1 656 Gene3D G3DSA:1.10.510.10 170 383 2.7E-41 T 11-11-2016 RB9745 066cf83f5eb42a4a813f12d299cb5fa1 656 SMART SM00220 103 388 1.7E-60 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9745 066cf83f5eb42a4a813f12d299cb5fa1 656 Gene3D G3DSA:3.30.200.20 99 169 9.7E-24 T 11-11-2016 RB13110 f30c21bd1ac561e7be231f9721fe0731 309 Gene3D G3DSA:3.60.21.10 3 156 1.7E-40 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB13110 f30c21bd1ac561e7be231f9721fe0731 309 Gene3D G3DSA:3.60.21.10 208 297 1.7E-40 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB13110 f30c21bd1ac561e7be231f9721fe0731 309 Pfam PF00149 Calcineurin-like phosphoesterase 7 169 2.2E-10 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB13110 f30c21bd1ac561e7be231f9721fe0731 309 SUPERFAMILY SSF56300 5 160 9.23E-30 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB2193 8000e88ec684785532c28c3ef4e44fbf 284 Pfam PF14067 LssY C-terminus 76 258 1.9E-66 T 11-11-2016 IPR025902 LssY-like C-terminal domain RB460 02d87525f393bc5bfb53598363c3dc08 901 Gene3D G3DSA:3.30.870.10 98 183 1.4E-6 T 11-11-2016 RB460 02d87525f393bc5bfb53598363c3dc08 901 SUPERFAMILY SSF52540 186 425 1.2E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB460 02d87525f393bc5bfb53598363c3dc08 901 Pfam PF00271 Helicase conserved C-terminal domain 689 793 2.3E-12 T 11-11-2016 IPR001650 Helicase, C-terminal RB460 02d87525f393bc5bfb53598363c3dc08 901 Gene3D G3DSA:3.40.50.300 665 819 1.5E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB460 02d87525f393bc5bfb53598363c3dc08 901 SMART SM00490 705 794 3.5E-11 T 11-11-2016 IPR001650 Helicase, C-terminal RB460 02d87525f393bc5bfb53598363c3dc08 901 Gene3D G3DSA:3.40.50.300 223 419 7.0E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB460 02d87525f393bc5bfb53598363c3dc08 901 Pfam PF13091 PLD-like domain 21 177 4.0E-17 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RB460 02d87525f393bc5bfb53598363c3dc08 901 SUPERFAMILY SSF56024 97 183 1.77E-7 T 11-11-2016 RB460 02d87525f393bc5bfb53598363c3dc08 901 Pfam PF00176 SNF2 family N-terminal domain 251 424 4.4E-15 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RB460 02d87525f393bc5bfb53598363c3dc08 901 SUPERFAMILY SSF52540 657 848 2.4E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB460 02d87525f393bc5bfb53598363c3dc08 901 SUPERFAMILY SSF52540 357 423 2.4E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB460 02d87525f393bc5bfb53598363c3dc08 901 SMART SM00487 223 435 1.7E-17 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB7875 762c05e83db06274d0b39dd5cae479e8 492 Gene3D G3DSA:3.40.720.10 28 386 9.0E-99 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7875 762c05e83db06274d0b39dd5cae479e8 492 ProSitePatterns PS00523 Sulfatases signature 1. 75 87 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB7875 762c05e83db06274d0b39dd5cae479e8 492 Pfam PF14707 C-terminal region of aryl-sulfatase 376 466 9.6E-9 T 11-11-2016 RB7875 762c05e83db06274d0b39dd5cae479e8 492 Pfam PF00884 Sulfatase 30 349 2.8E-62 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB7875 762c05e83db06274d0b39dd5cae479e8 492 Gene3D G3DSA:3.30.1120.10 387 458 1.9E-10 T 11-11-2016 RB7875 762c05e83db06274d0b39dd5cae479e8 492 SUPERFAMILY SSF53649 27 454 3.78E-116 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7960 e5bad79b3f7b84ad4f505d84a5249882 363 SUPERFAMILY SSF55931 13 271 1.51E-82 T 11-11-2016 RB7960 e5bad79b3f7b84ad4f505d84a5249882 363 Gene3D G3DSA:3.30.590.10 13 258 1.6E-81 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RB7960 e5bad79b3f7b84ad4f505d84a5249882 363 ProSitePatterns PS00112 Phosphagen kinase active site signature. 169 175 - T 11-11-2016 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 RB7960 e5bad79b3f7b84ad4f505d84a5249882 363 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 23 257 2.3E-83 T 11-11-2016 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 RB7960 e5bad79b3f7b84ad4f505d84a5249882 363 Hamap MF_00602 Protein-arginine kinase [mcsB]. 16 353 31.673 T 11-11-2016 IPR023660 Arginine kinase GO:0016775 RB11650 adf5c66a0b5d96c4f515558559b41f16 459 Gene3D G3DSA:3.30.360.10 238 432 4.0E-15 T 11-11-2016 RB11650 adf5c66a0b5d96c4f515558559b41f16 459 Gene3D G3DSA:3.40.50.720 42 202 1.9E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11650 adf5c66a0b5d96c4f515558559b41f16 459 SUPERFAMILY SSF55347 176 202 2.45E-16 T 11-11-2016 RB11650 adf5c66a0b5d96c4f515558559b41f16 459 SUPERFAMILY SSF55347 233 395 2.45E-16 T 11-11-2016 RB11650 adf5c66a0b5d96c4f515558559b41f16 459 SUPERFAMILY SSF51735 38 200 1.13E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11650 adf5c66a0b5d96c4f515558559b41f16 459 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 47 167 1.9E-18 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB1363 c310de5d0daed6948192c55890c30a6a 361 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 4.5E-78 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RB1363 c310de5d0daed6948192c55890c30a6a 361 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.1E-43 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RB1363 c310de5d0daed6948192c55890c30a6a 361 SMART SM01003 4 137 2.3E-71 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RB1363 c310de5d0daed6948192c55890c30a6a 361 SUPERFAMILY SSF52283 305 359 9.35E-59 T 11-11-2016 RB1363 c310de5d0daed6948192c55890c30a6a 361 SUPERFAMILY SSF52283 1 137 9.35E-59 T 11-11-2016 RB1363 c310de5d0daed6948192c55890c30a6a 361 SUPERFAMILY SSF51735 137 303 8.57E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1363 c310de5d0daed6948192c55890c30a6a 361 SMART SM01002 149 297 9.4E-81 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RB1363 c310de5d0daed6948192c55890c30a6a 361 Gene3D G3DSA:3.40.50.1770 191 348 6.0E-20 T 11-11-2016 RB1363 c310de5d0daed6948192c55890c30a6a 361 Gene3D G3DSA:3.40.50.1770 3 189 1.7E-58 T 11-11-2016 RB1363 c310de5d0daed6948192c55890c30a6a 361 PIRSF PIRSF000183 1 361 1.9E-147 T 11-11-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 RB1363 c310de5d0daed6948192c55890c30a6a 361 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 357 1.4E-150 T 11-11-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 RB2577 cd8a9471dc2cea163857418676371225 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 84 9.1E-18 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB2577 cd8a9471dc2cea163857418676371225 95 Gene3D G3DSA:2.40.50.220 1 90 4.7E-19 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB2577 cd8a9471dc2cea163857418676371225 95 SUPERFAMILY SSF159133 1 86 4.71E-19 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Pfam PF00575 S1 RNA binding domain 686 757 3.7E-15 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SUPERFAMILY SSF55666 516 616 7.43E-24 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SUPERFAMILY SSF50249 674 760 3.6E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Gene3D G3DSA:3.30.230.70 379 608 2.7E-75 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Gene3D G3DSA:3.30.230.70 69 290 2.7E-72 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SUPERFAMILY SSF46915 297 391 1.44E-11 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SUPERFAMILY SSF54211 68 209 9.62E-41 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 308 386 1.8E-8 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Pfam PF03725 3' exoribonuclease family, domain 2 213 276 1.0E-12 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Pfam PF00013 KH domain 626 680 8.0E-11 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 77 758 2.8E-275 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Pfam PF01138 3' exoribonuclease family, domain 1 82 204 2.4E-12 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Pfam PF01138 3' exoribonuclease family, domain 1 390 522 3.3E-18 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 69 760 28.444 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SMART SM00316 687 757 1.0E-20 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SUPERFAMILY SSF54791 619 696 2.38E-16 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SUPERFAMILY SSF55666 210 300 3.79E-25 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Gene3D G3DSA:3.30.1370.10 618 684 1.7E-21 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SMART SM00322 619 684 3.3E-10 T 11-11-2016 IPR004087 K Homology domain GO:0003676 RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 SUPERFAMILY SSF54211 366 559 3.29E-43 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Gene3D G3DSA:2.40.50.140 685 761 9.3E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB5804 767cf0f273f675ef2d9b1ed452c8da65 818 Gene3D G3DSA:1.10.10.400 303 378 9.6E-12 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RB5824 ee86c4907f7b066247ed3937176d533f 326 Pfam PF01926 50S ribosome-binding GTPase 115 172 3.0E-13 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5824 ee86c4907f7b066247ed3937176d533f 326 PIRSF PIRSF006230 1 275 1.2E-108 T 11-11-2016 IPR016478 GTPase, MTG1 RB5824 ee86c4907f7b066247ed3937176d533f 326 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 270 2.5E-96 T 11-11-2016 IPR019991 GTP-binding protein, ribosome biogenesis RB5824 ee86c4907f7b066247ed3937176d533f 326 SUPERFAMILY SSF52540 9 182 1.74E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5824 ee86c4907f7b066247ed3937176d533f 326 Gene3D G3DSA:3.40.50.300 18 168 5.7E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5824 ee86c4907f7b066247ed3937176d533f 326 Gene3D G3DSA:1.10.1580.10 174 264 1.8E-27 T 11-11-2016 IPR023179 GTP-binding protein, orthogonal bundle domain RB5601 fb130220ea6c0ada06dc40ebfe167899 158 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 48 135 1.1E-14 T 11-11-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 RB5601 fb130220ea6c0ada06dc40ebfe167899 158 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 46 132 8.5E-25 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 RB5601 fb130220ea6c0ada06dc40ebfe167899 158 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 43 132 19.766 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 RB5601 fb130220ea6c0ada06dc40ebfe167899 158 SUPERFAMILY SSF101386 46 137 1.31E-21 T 11-11-2016 RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 SUPERFAMILY SSF46626 1234 1304 1.07E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 Gene3D G3DSA:1.10.760.10 1077 1195 1.1E-28 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 SUPERFAMILY SSF52266 101 303 6.16E-21 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 SUPERFAMILY SSF63829 441 647 5.04E-20 T 11-11-2016 RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 1074 1165 9.2E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 SUPERFAMILY SSF49785 756 843 2.76E-12 T 11-11-2016 IPR008979 Galactose-binding domain-like RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1247 1382 7.4E-20 T 11-11-2016 IPR013427 Haem-binding domain, putative RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 SUPERFAMILY SSF46626 1076 1187 1.09E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 434 677 4.5E-45 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 Gene3D G3DSA:1.10.760.10 1237 1322 1.4E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 Gene3D G3DSA:1.10.760.10 1359 1362 1.4E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 122 292 4.9E-13 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 Gene3D G3DSA:3.40.50.1110 93 302 8.0E-19 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 Gene3D G3DSA:2.120.10.30 427 631 9.8E-11 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB7973 68073a446bb1e1369eaec2dcfea515c8 1388 Gene3D G3DSA:2.60.120.260 757 841 2.5E-13 T 11-11-2016 IPR008979 Galactose-binding domain-like RB210 252e20825288d67e7dd143c35fc26f75 341 TIGRFAM TIGR03546 TIGR03546: TIGR03546 family protein 28 176 2.9E-52 T 11-11-2016 IPR019935 Conserved hypothetical protein CHP03546 RB210 252e20825288d67e7dd143c35fc26f75 341 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 42 161 3.9E-6 T 11-11-2016 IPR018639 Domain of unknown function DUF2062 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 ProSitePatterns PS00356 LacI-type HTH domain signature. 45 63 - T 11-11-2016 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 Gene3D G3DSA:3.40.50.2300 213 350 4.6E-49 T 11-11-2016 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 Gene3D G3DSA:3.40.50.2300 95 212 3.9E-34 T 11-11-2016 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 SMART SM00354 42 112 1.3E-28 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 Gene3D G3DSA:1.10.260.40 43 94 1.0E-23 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 SUPERFAMILY SSF47413 42 100 2.34E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 Pfam PF00356 Bacterial regulatory proteins, lacI family 44 89 1.7E-18 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 54 64 6.3E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 44 54 6.3E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RB2535 20137941be2ffbe85b98ae8c081dcf04 372 SUPERFAMILY SSF53822 102 369 1.27E-69 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB2535 20137941be2ffbe85b98ae8c081dcf04 372 Pfam PF13377 Periplasmic binding protein-like domain 208 367 1.1E-33 T 11-11-2016 RB11988 929fdc9b7728e4ba3e12769f3941d6fd 880 SMART SM00220 585 857 4.0E-51 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11988 929fdc9b7728e4ba3e12769f3941d6fd 880 Pfam PF00069 Protein kinase domain 585 841 2.0E-46 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11988 929fdc9b7728e4ba3e12769f3941d6fd 880 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 704 716 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB11988 929fdc9b7728e4ba3e12769f3941d6fd 880 SUPERFAMILY SSF56112 582 848 1.14E-65 T 11-11-2016 IPR011009 Protein kinase-like domain RB11988 929fdc9b7728e4ba3e12769f3941d6fd 880 Gene3D G3DSA:3.30.200.20 579 683 1.1E-23 T 11-11-2016 RB11988 929fdc9b7728e4ba3e12769f3941d6fd 880 Gene3D G3DSA:1.10.510.10 684 860 2.7E-41 T 11-11-2016 RB11988 929fdc9b7728e4ba3e12769f3941d6fd 880 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 591 614 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB8978 1bd714ede135bbd3da970254a7d72031 268 Gene3D G3DSA:3.60.15.10 1 235 4.6E-31 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB8978 1bd714ede135bbd3da970254a7d72031 268 SUPERFAMILY SSF56281 1 240 2.49E-37 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB8978 1bd714ede135bbd3da970254a7d72031 268 SMART SM00849 11 191 1.9E-12 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB8978 1bd714ede135bbd3da970254a7d72031 268 Pfam PF12706 Beta-lactamase superfamily domain 24 205 6.1E-19 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB5089 8218e98259215bc17517d309c240e114 396 Pfam PF07596 Protein of unknown function (DUF1559) 50 356 5.5E-58 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5089 8218e98259215bc17517d309c240e114 396 Gene3D G3DSA:3.30.700.10 26 87 1.8E-6 T 11-11-2016 RB5089 8218e98259215bc17517d309c240e114 396 Pfam PF13633 Prokaryotic N-terminal methylation site 24 49 1.3E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5089 8218e98259215bc17517d309c240e114 396 SUPERFAMILY SSF54523 26 167 1.57E-24 T 11-11-2016 RB5089 8218e98259215bc17517d309c240e114 396 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 45 2.8E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5174 9e4c5fc1489f3d0a43f51a55418d1c6e 589 Pfam PF00263 Bacterial type II and III secretion system protein 267 427 9.4E-39 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 RB5174 9e4c5fc1489f3d0a43f51a55418d1c6e 589 Pfam PF13629 Pilus formation protein N terminal region 58 125 4.3E-15 T 11-11-2016 IPR032789 Pilus formation protein, N-terminal RB5174 9e4c5fc1489f3d0a43f51a55418d1c6e 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 392 410 4.3E-10 T 11-11-2016 IPR001775 GspD/PilQ family RB5174 9e4c5fc1489f3d0a43f51a55418d1c6e 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 415 429 4.3E-10 T 11-11-2016 IPR001775 GspD/PilQ family RB5174 9e4c5fc1489f3d0a43f51a55418d1c6e 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 191 201 4.3E-10 T 11-11-2016 IPR001775 GspD/PilQ family RB5174 9e4c5fc1489f3d0a43f51a55418d1c6e 589 PRINTS PR00811 Bacterial general secretion pathway protein D signature 263 287 4.3E-10 T 11-11-2016 IPR001775 GspD/PilQ family RB3006 e9978f5db5bd38c6e025fa20e1af5b2d 1153 SUPERFAMILY SSF50939 512 760 3.07E-20 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3006 e9978f5db5bd38c6e025fa20e1af5b2d 1153 Gene3D G3DSA:2.120.10.10 55 389 1.0E-54 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3006 e9978f5db5bd38c6e025fa20e1af5b2d 1153 Gene3D G3DSA:3.40.50.1820 836 1146 3.2E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3006 e9978f5db5bd38c6e025fa20e1af5b2d 1153 SUPERFAMILY SSF50939 45 383 1.77E-66 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3006 e9978f5db5bd38c6e025fa20e1af5b2d 1153 Pfam PF00326 Prolyl oligopeptidase family 978 1049 5.3E-6 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB3006 e9978f5db5bd38c6e025fa20e1af5b2d 1153 Pfam PF13088 BNR repeat-like domain 108 350 2.3E-32 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3006 e9978f5db5bd38c6e025fa20e1af5b2d 1153 Gene3D G3DSA:2.120.10.10 545 707 2.0E-10 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3006 e9978f5db5bd38c6e025fa20e1af5b2d 1153 SUPERFAMILY SSF53474 832 1147 5.03E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11291 1076ccc0783457f06e21cf3a8110dd92 146 Gene3D G3DSA:2.60.120.10 55 125 2.0E-16 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB11291 1076ccc0783457f06e21cf3a8110dd92 146 SUPERFAMILY SSF51182 28 127 1.07E-19 T 11-11-2016 IPR011051 RmlC-like cupin domain RB11291 1076ccc0783457f06e21cf3a8110dd92 146 Pfam PF07883 Cupin domain 64 127 3.9E-14 T 11-11-2016 IPR013096 Cupin 2, conserved barrel RB7452 be20bdf34f9ea4134b4d2da13e779c99 170 Gene3D G3DSA:2.170.270.10 29 149 8.3E-30 T 11-11-2016 RB7452 be20bdf34f9ea4134b4d2da13e779c99 170 SUPERFAMILY SSF82199 29 147 4.19E-32 T 11-11-2016 RB7452 be20bdf34f9ea4134b4d2da13e779c99 170 Pfam PF00856 SET domain 39 127 7.9E-12 T 11-11-2016 IPR001214 SET domain GO:0005515 RB7452 be20bdf34f9ea4134b4d2da13e779c99 170 SMART SM00317 28 134 8.3E-20 T 11-11-2016 IPR001214 SET domain GO:0005515 RB307 7b89f37b6d4f2af075dbc99173a27550 476 SMART SM01274 92 225 1.3E-84 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RB307 7b89f37b6d4f2af075dbc99173a27550 476 SMART SM00919 237 460 8.2E-116 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RB307 7b89f37b6d4f2af075dbc99173a27550 476 PIRSF PIRSF000106 65 476 2.1E-85 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RB307 7b89f37b6d4f2af075dbc99173a27550 476 Gene3D G3DSA:3.40.50.720 235 472 2.5E-76 T 11-11-2016 IPR016040 NAD(P)-binding domain RB307 7b89f37b6d4f2af075dbc99173a27550 476 SUPERFAMILY SSF51735 237 471 6.07E-74 T 11-11-2016 IPR016040 NAD(P)-binding domain RB307 7b89f37b6d4f2af075dbc99173a27550 476 Pfam PF13291 ACT domain 7 80 3.7E-9 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RB307 7b89f37b6d4f2af075dbc99173a27550 476 Pfam PF03949 Malic enzyme, NAD binding domain 239 459 4.0E-23 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RB307 7b89f37b6d4f2af075dbc99173a27550 476 Pfam PF00390 Malic enzyme, N-terminal domain 93 190 1.6E-24 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RB307 7b89f37b6d4f2af075dbc99173a27550 476 Gene3D G3DSA:3.30.70.260 8 80 5.9E-9 T 11-11-2016 RB307 7b89f37b6d4f2af075dbc99173a27550 476 PRINTS PR00072 Malic enzyme signature 233 249 1.1E-8 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RB307 7b89f37b6d4f2af075dbc99173a27550 476 PRINTS PR00072 Malic enzyme signature 264 280 1.1E-8 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RB307 7b89f37b6d4f2af075dbc99173a27550 476 PRINTS PR00072 Malic enzyme signature 154 176 1.1E-8 T 11-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 RB307 7b89f37b6d4f2af075dbc99173a27550 476 SUPERFAMILY SSF55021 10 81 3.76E-5 T 11-11-2016 RB307 7b89f37b6d4f2af075dbc99173a27550 476 SUPERFAMILY SSF53223 86 235 1.94E-56 T 11-11-2016 RB307 7b89f37b6d4f2af075dbc99173a27550 476 Gene3D G3DSA:3.40.50.10380 91 234 3.0E-53 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RB4433 7eb10aa486111b4412d83b491c189e1d 162 Pfam PF00210 Ferritin-like domain 24 160 4.8E-22 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RB4433 7eb10aa486111b4412d83b491c189e1d 162 PIRSF PIRSF005900 1 162 1.0E-47 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RB4433 7eb10aa486111b4412d83b491c189e1d 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 44 60 8.3E-12 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RB4433 7eb10aa486111b4412d83b491c189e1d 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 139 157 8.3E-12 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RB4433 7eb10aa486111b4412d83b491c189e1d 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 68 84 8.3E-12 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RB4433 7eb10aa486111b4412d83b491c189e1d 162 SUPERFAMILY SSF47240 15 159 2.35E-42 T 11-11-2016 IPR009078 Ferritin-like superfamily RB4433 7eb10aa486111b4412d83b491c189e1d 162 Gene3D G3DSA:1.20.1260.10 14 159 3.5E-45 T 11-11-2016 IPR012347 Ferritin-related RB11587 28c5424eadca6b0633ec3d1980f292b3 540 Gene3D G3DSA:1.10.10.10 161 237 1.7E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11587 28c5424eadca6b0633ec3d1980f292b3 540 Pfam PF04079 Segregation and condensation complex subunit ScpB 165 325 1.7E-45 T 11-11-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RB11587 28c5424eadca6b0633ec3d1980f292b3 540 SUPERFAMILY SSF46785 244 316 9.25E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11587 28c5424eadca6b0633ec3d1980f292b3 540 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 165 336 2.6E-27 T 11-11-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RB11587 28c5424eadca6b0633ec3d1980f292b3 540 SUPERFAMILY SSF46785 161 237 2.42E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11587 28c5424eadca6b0633ec3d1980f292b3 540 Gene3D G3DSA:1.10.10.10 245 316 5.5E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2174 4ae48b989340fc6fe612828ddbe09ce5 149 SMART SM00448 28 138 3.9E-11 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2174 4ae48b989340fc6fe612828ddbe09ce5 149 Gene3D G3DSA:3.40.50.2300 26 144 9.8E-22 T 11-11-2016 RB2174 4ae48b989340fc6fe612828ddbe09ce5 149 Pfam PF00072 Response regulator receiver domain 45 138 8.9E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2174 4ae48b989340fc6fe612828ddbe09ce5 149 SUPERFAMILY SSF52172 30 145 4.55E-21 T 11-11-2016 IPR011006 CheY-like superfamily RB9401 98c6c48962ce8a93a2805cb877001a9c 479 Gene3D G3DSA:3.80.30.20 163 394 2.0E-71 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB9401 98c6c48962ce8a93a2805cb877001a9c 479 SMART SM00729 162 379 1.0E-50 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB9401 98c6c48962ce8a93a2805cb877001a9c 479 Pfam PF01938 TRAM domain 394 462 8.8E-6 T 11-11-2016 IPR002792 TRAM domain RB9401 98c6c48962ce8a93a2805cb877001a9c 479 SUPERFAMILY SSF102114 151 385 8.63E-52 T 11-11-2016 RB9401 98c6c48962ce8a93a2805cb877001a9c 479 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 8 462 3.6E-132 T 11-11-2016 RB9401 98c6c48962ce8a93a2805cb877001a9c 479 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 166 186 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RB9401 98c6c48962ce8a93a2805cb877001a9c 479 Pfam PF04055 Radical SAM superfamily 169 339 1.3E-28 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB9401 98c6c48962ce8a93a2805cb877001a9c 479 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 6 464 68.426 T 11-11-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RB9401 98c6c48962ce8a93a2805cb877001a9c 479 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 460 6.4E-134 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RB9401 98c6c48962ce8a93a2805cb877001a9c 479 Pfam PF00919 Uncharacterized protein family UPF0004 8 106 7.8E-31 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:3.30.1490.20 206 242 3.1E-14 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:3.30.1490.20 136 159 3.1E-14 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:1.20.1580.10 98 135 1.1E-48 T 11-11-2016 RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:1.20.1580.10 258 378 1.1E-48 T 11-11-2016 RB10876 439e0498b9086402f09a7ae4170247fd 839 SUPERFAMILY SSF52540 9 210 3.48E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10876 439e0498b9086402f09a7ae4170247fd 839 SUPERFAMILY SSF52540 339 470 3.48E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10876 439e0498b9086402f09a7ae4170247fd 839 SUPERFAMILY SSF52540 515 813 1.22E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10876 439e0498b9086402f09a7ae4170247fd 839 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 302 825 1.6E-225 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RB10876 439e0498b9086402f09a7ae4170247fd 839 ProSitePatterns PS00211 ABC transporters family signature. 388 402 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:1.20.1580.10 594 720 4.1E-46 T 11-11-2016 RB10876 439e0498b9086402f09a7ae4170247fd 839 ProSitePatterns PS00211 ABC transporters family signature. 730 744 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:3.40.50.300 721 837 1.9E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:3.40.50.300 379 496 5.2E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:3.40.50.300 511 569 1.9E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10876 439e0498b9086402f09a7ae4170247fd 839 Gene3D G3DSA:3.40.50.300 4 57 5.2E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF48695 809 848 8.79E-6 T 11-11-2016 IPR011031 Multihaem cytochrome RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF48695 754 774 8.79E-6 T 11-11-2016 IPR011031 Multihaem cytochrome RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF48695 681 698 8.79E-6 T 11-11-2016 IPR011031 Multihaem cytochrome RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF48695 886 896 8.79E-6 T 11-11-2016 IPR011031 Multihaem cytochrome RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Pfam PF07691 PA14 domain 551 641 1.7E-8 T 11-11-2016 IPR011658 PA14 domain RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.760.10 459 510 2.5E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 434 509 2.7E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:3.90.182.10 527 646 2.3E-15 T 11-11-2016 IPR011658 PA14 domain RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.760.10 670 689 2.0E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.760.10 334 419 1.5E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.760.10 795 842 2.0E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.760.10 884 966 2.9E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Pfam PF06439 Domain of Unknown Function (DUF1080) 127 305 5.5E-31 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.710.10 756 778 4.6E-8 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.710.10 690 719 4.6E-8 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.710.10 434 458 4.6E-8 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 Gene3D G3DSA:1.10.710.10 873 883 4.6E-8 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SMART SM00758 523 651 7.5E-27 T 11-11-2016 IPR011658 PA14 domain RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF46626 876 938 2.47E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF56988 558 637 3.4E-9 T 11-11-2016 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF46626 335 423 1.88E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF46626 431 509 4.05E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9439 0ac45301a6016d4f3bad0ae56098a555 1208 SUPERFAMILY SSF46626 659 697 4.93E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12303 56019d2cbe08ce29c6615432be46ab3f 625 SUPERFAMILY SSF50998 413 590 9.81E-16 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB12303 56019d2cbe08ce29c6615432be46ab3f 625 Gene3D G3DSA:2.60.120.360 254 345 4.5E-11 T 11-11-2016 RB12303 56019d2cbe08ce29c6615432be46ab3f 625 Gene3D G3DSA:2.140.10.10 410 622 1.7E-61 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB12303 56019d2cbe08ce29c6615432be46ab3f 625 Gene3D G3DSA:2.140.10.10 5 215 1.7E-61 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB12303 56019d2cbe08ce29c6615432be46ab3f 625 SUPERFAMILY SSF50998 16 301 1.24E-41 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB12303 56019d2cbe08ce29c6615432be46ab3f 625 Pfam PF11721 Di-glucose binding within endoplasmic reticulum 231 340 3.5E-24 T 11-11-2016 IPR021720 Malectin Reactome: R-HSA-532668 RB12303 56019d2cbe08ce29c6615432be46ab3f 625 Pfam PF13360 PQQ-like domain 84 201 9.7E-14 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB12303 56019d2cbe08ce29c6615432be46ab3f 625 Pfam PF13360 PQQ-like domain 418 547 1.2E-8 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB10430 d3e6b132fc9c732020d1990427601ccf 330 SUPERFAMILY SSF52540 140 328 7.97E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10430 d3e6b132fc9c732020d1990427601ccf 330 SUPERFAMILY SSF52540 29 75 7.97E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10430 d3e6b132fc9c732020d1990427601ccf 330 Pfam PF13469 Sulfotransferase family 33 256 1.0E-7 T 11-11-2016 RB1555 a98941339fdd773614bfd5ae4a8e57c3 476 SUPERFAMILY SSF55347 170 200 2.18E-11 T 11-11-2016 RB1555 a98941339fdd773614bfd5ae4a8e57c3 476 SUPERFAMILY SSF55347 232 299 2.18E-11 T 11-11-2016 RB1555 a98941339fdd773614bfd5ae4a8e57c3 476 Gene3D G3DSA:3.40.50.720 234 276 3.1E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1555 a98941339fdd773614bfd5ae4a8e57c3 476 Gene3D G3DSA:3.40.50.720 43 200 3.1E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1555 a98941339fdd773614bfd5ae4a8e57c3 476 SUPERFAMILY SSF51735 44 191 1.06E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1555 a98941339fdd773614bfd5ae4a8e57c3 476 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 46 162 2.8E-15 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 SUPERFAMILY SSF48592 405 522 2.6E-77 T 11-11-2016 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 SUPERFAMILY SSF48592 6 133 2.6E-77 T 11-11-2016 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 11-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 SUPERFAMILY SSF52029 183 375 2.69E-82 T 11-11-2016 IPR027409 GroEL-like apical domain RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 3.5E-100 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 Gene3D G3DSA:1.10.560.10 370 519 5.3E-40 T 11-11-2016 IPR027413 GroEL-like equatorial domain RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 5.3E-257 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 Gene3D G3DSA:3.50.7.10 196 369 2.1E-92 T 11-11-2016 IPR027409 GroEL-like apical domain RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 Gene3D G3DSA:1.10.560.10 4 195 9.7E-45 T 11-11-2016 IPR027413 GroEL-like equatorial domain RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 538 39.486 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 SUPERFAMILY SSF54849 136 203 5.95E-22 T 11-11-2016 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 PRINTS PR00298 60kDa chaperonin signature 267 290 7.3E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 PRINTS PR00298 60kDa chaperonin signature 82 109 7.3E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 PRINTS PR00298 60kDa chaperonin signature 397 418 7.3E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 PRINTS PR00298 60kDa chaperonin signature 349 374 7.3E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8970 e3dd57512d9fdd11750f4e3ae582fa1a 540 PRINTS PR00298 60kDa chaperonin signature 26 52 7.3E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 Gene3D G3DSA:2.40.50.140 41 203 5.6E-35 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10883 74471f86c0f21e8dd844bb7b879b1410 546 Pfam PF00152 tRNA synthetases class II (D, K and N) 211 542 4.0E-79 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 94 545 2.4E-158 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 PRINTS PR00982 Lysyl-tRNA synthetase signature 292 305 1.1E-32 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 PRINTS PR00982 Lysyl-tRNA synthetase signature 429 445 1.1E-32 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 PRINTS PR00982 Lysyl-tRNA synthetase signature 310 327 1.1E-32 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 PRINTS PR00982 Lysyl-tRNA synthetase signature 247 257 1.1E-32 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 PRINTS PR00982 Lysyl-tRNA synthetase signature 263 279 1.1E-32 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 Pfam PF01336 OB-fold nucleic acid binding domain 117 193 2.7E-14 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 SUPERFAMILY SSF55681 210 544 1.47E-107 T 11-11-2016 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 42 546 37.655 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 Gene3D G3DSA:3.30.930.10 207 541 8.2E-107 T 11-11-2016 RB10883 74471f86c0f21e8dd844bb7b879b1410 546 SUPERFAMILY SSF50249 34 83 1.03E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10883 74471f86c0f21e8dd844bb7b879b1410 546 SUPERFAMILY SSF50249 111 202 1.03E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB5116 2bee449b26a975e96ba714584656da9c 577 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 149 325 2.2E-15 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB5116 2bee449b26a975e96ba714584656da9c 577 SUPERFAMILY SSF111369 142 175 5.36E-15 T 11-11-2016 RB5116 2bee449b26a975e96ba714584656da9c 577 SUPERFAMILY SSF111369 204 324 5.36E-15 T 11-11-2016 RB5116 2bee449b26a975e96ba714584656da9c 577 Gene3D G3DSA:2.40.50.100 225 271 1.1E-5 T 11-11-2016 RB10327 bc82d19925d2025e75bddfaac3582eb3 127 SUPERFAMILY SSF55159 14 126 1.16E-22 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 RB10327 bc82d19925d2025e75bddfaac3582eb3 127 PIRSF PIRSF037511 1 127 1.3E-36 T 11-11-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 RB10327 bc82d19925d2025e75bddfaac3582eb3 127 Gene3D G3DSA:3.30.780.10 51 125 2.7E-20 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 RB10327 bc82d19925d2025e75bddfaac3582eb3 127 Pfam PF01253 Translation initiation factor SUI1 51 123 1.1E-15 T 11-11-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 RB9420 2102a9ae826abed348ceb2eaccf05f9c 663 Gene3D G3DSA:3.40.50.300 418 648 9.3E-84 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9420 2102a9ae826abed348ceb2eaccf05f9c 663 Pfam PF00664 ABC transporter transmembrane region 136 369 5.0E-29 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB9420 2102a9ae826abed348ceb2eaccf05f9c 663 SMART SM00382 444 630 5.3E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9420 2102a9ae826abed348ceb2eaccf05f9c 663 SUPERFAMILY SSF52540 415 654 1.2E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9420 2102a9ae826abed348ceb2eaccf05f9c 663 Pfam PF00005 ABC transporter 435 584 8.0E-36 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9420 2102a9ae826abed348ceb2eaccf05f9c 663 ProSitePatterns PS00211 ABC transporters family signature. 556 570 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB9420 2102a9ae826abed348ceb2eaccf05f9c 663 SUPERFAMILY SSF90123 58 399 3.53E-59 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB9420 2102a9ae826abed348ceb2eaccf05f9c 663 Gene3D G3DSA:1.20.1560.10 64 398 4.2E-60 T 11-11-2016 RB12773 81fec52bddb0512acb4774483d6faa82 368 SMART SM00382 125 250 1.8E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain RB12773 81fec52bddb0512acb4774483d6faa82 368 Gene3D G3DSA:3.40.50.300 107 345 1.6E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12773 81fec52bddb0512acb4774483d6faa82 368 SUPERFAMILY SSF52540 5 339 3.24E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12773 81fec52bddb0512acb4774483d6faa82 368 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 196 210 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB12773 81fec52bddb0512acb4774483d6faa82 368 Pfam PF00437 Type II/IV secretion system protein 11 262 7.8E-45 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB12773 81fec52bddb0512acb4774483d6faa82 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 346 2.4E-132 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RB12773 81fec52bddb0512acb4774483d6faa82 368 Gene3D G3DSA:3.30.450.90 5 100 1.2E-4 T 11-11-2016 RB9164 da7c8f28260f7bb24eebca3d2de47f65 597 Gene3D G3DSA:1.10.760.10 224 310 1.6E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9164 da7c8f28260f7bb24eebca3d2de47f65 597 SUPERFAMILY SSF52833 50 219 5.32E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold RB9164 da7c8f28260f7bb24eebca3d2de47f65 597 Gene3D G3DSA:3.40.30.10 51 206 2.3E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold RB9164 da7c8f28260f7bb24eebca3d2de47f65 597 Gene3D G3DSA:2.60.120.310 355 459 3.5E-6 T 11-11-2016 IPR000323 Copper type II, ascorbate-dependent monooxygenase, N-terminal GO:0004497|GO:0005507|GO:0016715|GO:0055114 RB9164 da7c8f28260f7bb24eebca3d2de47f65 597 Gene3D G3DSA:2.60.120.230 469 565 4.7E-5 T 11-11-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 RB9164 da7c8f28260f7bb24eebca3d2de47f65 597 Pfam PF00578 AhpC/TSA family 51 170 2.7E-23 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB9164 da7c8f28260f7bb24eebca3d2de47f65 597 SUPERFAMILY SSF49742 467 591 7.85E-15 T 11-11-2016 IPR008977 PHM/PNGase F domain GO:0003824 RB9164 da7c8f28260f7bb24eebca3d2de47f65 597 SUPERFAMILY SSF49742 325 458 5.75E-23 T 11-11-2016 IPR008977 PHM/PNGase F domain GO:0003824 RB6207 6a4958d130cd5005e71fddaab6dc71ae 436 Gene3D G3DSA:2.140.10.10 11 423 5.6E-53 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB6207 6a4958d130cd5005e71fddaab6dc71ae 436 Pfam PF13360 PQQ-like domain 103 357 5.6E-36 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB6207 6a4958d130cd5005e71fddaab6dc71ae 436 SMART SM00564 84 119 22.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6207 6a4958d130cd5005e71fddaab6dc71ae 436 SMART SM00564 141 172 1.5 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6207 6a4958d130cd5005e71fddaab6dc71ae 436 SMART SM00564 328 359 25.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6207 6a4958d130cd5005e71fddaab6dc71ae 436 SMART SM00564 190 220 180.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6207 6a4958d130cd5005e71fddaab6dc71ae 436 SUPERFAMILY SSF50998 38 393 2.62E-57 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB2905 cb3e56da283187e719f9808d4bf5aa85 267 Pfam PF04468 PSP1 C-terminal conserved region 50 134 6.0E-18 T 11-11-2016 IPR007557 PSP1, C-terminal RB1248 56bb42edd315ecbc2761fb1bd10dad5d 267 Gene3D G3DSA:3.40.50.300 20 243 4.5E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1248 56bb42edd315ecbc2761fb1bd10dad5d 267 SMART SM00382 48 230 2.0E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1248 56bb42edd315ecbc2761fb1bd10dad5d 267 SUPERFAMILY SSF52540 17 242 4.11E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1248 56bb42edd315ecbc2761fb1bd10dad5d 267 Pfam PF00005 ABC transporter 41 183 4.0E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 SMART SM00028 294 327 0.96 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 SMART SM00028 134 167 54.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 Gene3D G3DSA:1.25.40.10 70 199 4.1E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 Gene3D G3DSA:2.130.10.130 511 780 5.8E-23 T 11-11-2016 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 Gene3D G3DSA:2.130.10.130 781 911 1.8E-9 T 11-11-2016 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 Pfam PF07593 ASPIC and UnbV 941 1005 1.2E-13 T 11-11-2016 IPR011519 ASPIC/UnbV RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 SUPERFAMILY SSF48452 230 350 6.72E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 SUPERFAMILY SSF48452 71 199 1.67E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 Gene3D G3DSA:1.25.40.10 231 345 4.9E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 577 637 1.7E-12 T 11-11-2016 RB9066 0d90e1f44d2e90b4600c7e70fff6caa7 1028 SUPERFAMILY SSF69318 498 919 6.45E-47 T 11-11-2016 RB893 f3c48b73e38a00e9ef50d0e47368e13f 419 Pfam PF13620 Carboxypeptidase regulatory-like domain 212 258 5.7E-12 T 11-11-2016 RB893 f3c48b73e38a00e9ef50d0e47368e13f 419 SUPERFAMILY SSF117074 188 264 3.53E-17 T 11-11-2016 RB893 f3c48b73e38a00e9ef50d0e47368e13f 419 SUPERFAMILY SSF49384 46 165 6.54E-8 T 11-11-2016 IPR008965 Carbohydrate-binding domain GO:0030246 RB893 f3c48b73e38a00e9ef50d0e47368e13f 419 Gene3D G3DSA:2.60.40.10 202 259 2.6E-12 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB893 f3c48b73e38a00e9ef50d0e47368e13f 419 Gene3D G3DSA:2.60.40.680 53 160 2.4E-4 T 11-11-2016 IPR002102 Cellulosome anchoring protein, cohesin domain GO:0000272|GO:0030246 RB1148 b9d503d86b96bb95b9178bb685f6070b 314 Pfam PF00482 Type II secretion system (T2SS), protein F 151 275 7.6E-18 T 11-11-2016 IPR018076 Type II secretion system F domain RB3692 2654be7862b60eeecaa5754f708074dd 308 Gene3D G3DSA:1.10.10.60 207 263 3.0E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3692 2654be7862b60eeecaa5754f708074dd 308 Gene3D G3DSA:1.10.10.60 264 307 2.0E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3692 2654be7862b60eeecaa5754f708074dd 308 Pfam PF12833 Helix-turn-helix domain 231 307 3.2E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3692 2654be7862b60eeecaa5754f708074dd 308 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 262 304 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB3692 2654be7862b60eeecaa5754f708074dd 308 SUPERFAMILY SSF46689 210 258 5.38E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3692 2654be7862b60eeecaa5754f708074dd 308 SMART SM00342 225 308 2.9E-31 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3692 2654be7862b60eeecaa5754f708074dd 308 SUPERFAMILY SSF46689 262 307 4.44E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB7161 c6a75661ecc5cbdf619701c615cfd658 106 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 33 84 7.8E-11 T 11-11-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RB7161 c6a75661ecc5cbdf619701c615cfd658 106 SUPERFAMILY SSF101386 4 86 1.7E-21 T 11-11-2016 RB7161 c6a75661ecc5cbdf619701c615cfd658 106 Gene3D G3DSA:1.10.287.1080 3 86 3.9E-27 T 11-11-2016 RB9488 b6b03daf1346e6dac74e9423a28ab94f 543 Pfam PF03601 Conserved hypothetical protein 698 198 513 9.7E-47 T 11-11-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RB9488 b6b03daf1346e6dac74e9423a28ab94f 543 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 399 514 1.0E-13 T 11-11-2016 RB377 11ad932a9b755686b03d68a65096cdff 623 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 213 224 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB377 11ad932a9b755686b03d68a65096cdff 623 Gene3D G3DSA:3.30.70.20 119 189 1.5E-23 T 11-11-2016 RB377 11ad932a9b755686b03d68a65096cdff 623 Gene3D G3DSA:3.30.70.20 253 281 1.5E-23 T 11-11-2016 RB377 11ad932a9b755686b03d68a65096cdff 623 Gene3D G3DSA:3.30.70.20 222 252 6.4E-12 T 11-11-2016 RB377 11ad932a9b755686b03d68a65096cdff 623 Pfam PF13247 4Fe-4S dicluster domain 176 266 7.4E-22 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB377 11ad932a9b755686b03d68a65096cdff 623 SUPERFAMILY SSF54862 119 396 6.17E-57 T 11-11-2016 RB377 11ad932a9b755686b03d68a65096cdff 623 Gene3D G3DSA:3.30.70.20 190 221 7.9E-15 T 11-11-2016 RB377 11ad932a9b755686b03d68a65096cdff 623 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 323 610 8.8E-15 T 11-11-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 RB6025 8071d3df250516b03ec3bbafe41377e0 1094 Gene3D G3DSA:1.10.1330.10 48 108 1.8E-5 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB6025 8071d3df250516b03ec3bbafe41377e0 1094 Pfam PF00404 Dockerin type I repeat 91 111 2.4E-6 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB6025 8071d3df250516b03ec3bbafe41377e0 1094 Pfam PF00404 Dockerin type I repeat 48 65 1.1E-4 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB6025 8071d3df250516b03ec3bbafe41377e0 1094 SUPERFAMILY SSF63446 47 118 2.68E-8 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB6025 8071d3df250516b03ec3bbafe41377e0 1094 Pfam PF07595 Planctomycete extracellular 9 31 1.6E-6 T 11-11-2016 IPR011506 Planctomycete extracellular RB6688 4080b863cd1c8bc8d1483333638de7fb 228 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 24 109 2.4E-33 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 117 223 8.2E-39 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 190 197 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 Gene3D G3DSA:1.10.287.990 41 109 1.2E-29 T 11-11-2016 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 PIRSF PIRSF000349 4 228 4.2E-81 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 SUPERFAMILY SSF46609 15 111 6.15E-38 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 PRINTS PR01703 Manganese superoxide dismutase signature 27 38 6.7E-27 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 PRINTS PR01703 Manganese superoxide dismutase signature 188 200 6.7E-27 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 PRINTS PR01703 Manganese superoxide dismutase signature 93 106 6.7E-27 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 PRINTS PR01703 Manganese superoxide dismutase signature 146 154 6.7E-27 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 PRINTS PR01703 Manganese superoxide dismutase signature 48 61 6.7E-27 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB6688 4080b863cd1c8bc8d1483333638de7fb 228 SUPERFAMILY SSF54719 115 227 5.37E-46 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 RB11480 a033c084d2b29e16c28c3bcf6eb20f52 166 SMART SM00347 42 145 1.0E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11480 a033c084d2b29e16c28c3bcf6eb20f52 166 SUPERFAMILY SSF46785 21 162 4.62E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11480 a033c084d2b29e16c28c3bcf6eb20f52 166 Gene3D G3DSA:1.10.10.10 18 160 1.9E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11480 a033c084d2b29e16c28c3bcf6eb20f52 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 6.7E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11480 a033c084d2b29e16c28c3bcf6eb20f52 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 6.7E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11480 a033c084d2b29e16c28c3bcf6eb20f52 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 6.7E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11480 a033c084d2b29e16c28c3bcf6eb20f52 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 6.7E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11480 a033c084d2b29e16c28c3bcf6eb20f52 166 Pfam PF12802 MarR family 51 108 2.0E-8 T 11-11-2016 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Gene3D G3DSA:3.30.1360.40 334 430 4.1E-30 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 108 852 7.4E-292 T 11-11-2016 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Gene3D G3DSA:2.120.10.90 624 962 3.1E-123 T 11-11-2016 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Gene3D G3DSA:3.90.199.10 432 496 1.0E-106 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Gene3D G3DSA:3.90.199.10 128 333 1.0E-106 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 SUPERFAMILY SSF101904 626 853 4.84E-97 T 11-11-2016 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 SUPERFAMILY SSF101904 883 973 4.84E-97 T 11-11-2016 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 130 598 4.7E-134 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 786 832 5.9E-12 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 739 782 1.0E-11 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 916 963 3.9E-12 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 884 913 0.0027 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 682 729 2.3E-6 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 632 677 3.9E-7 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 SMART SM00434 109 591 3.5E-231 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB8841 0821b471f3f7f42c61deab5f59d02c4a 1003 SUPERFAMILY SSF56719 128 613 5.89E-157 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RB8028 433935bb614c85182a1b1e556fc7522c 611 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 261 273 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB8028 433935bb614c85182a1b1e556fc7522c 611 SUPERFAMILY SSF56112 139 386 6.47E-74 T 11-11-2016 IPR011009 Protein kinase-like domain RB8028 433935bb614c85182a1b1e556fc7522c 611 Gene3D G3DSA:3.30.200.20 119 250 6.4E-32 T 11-11-2016 RB8028 433935bb614c85182a1b1e556fc7522c 611 Gene3D G3DSA:1.10.510.10 251 417 4.0E-41 T 11-11-2016 RB8028 433935bb614c85182a1b1e556fc7522c 611 SMART SM00220 143 392 2.9E-64 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8028 433935bb614c85182a1b1e556fc7522c 611 Pfam PF00069 Protein kinase domain 145 391 2.3E-54 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8028 433935bb614c85182a1b1e556fc7522c 611 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 149 172 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB5272 6333bf96514578b461498f5994e3544f 457 Gene3D G3DSA:2.140.10.10 18 456 1.0E-69 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB5272 6333bf96514578b461498f5994e3544f 457 Pfam PF13360 PQQ-like domain 121 348 5.6E-19 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB5272 6333bf96514578b461498f5994e3544f 457 SUPERFAMILY SSF50998 120 455 4.06E-62 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB5272 6333bf96514578b461498f5994e3544f 457 SUPERFAMILY SSF50998 30 93 4.06E-62 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB5272 6333bf96514578b461498f5994e3544f 457 SMART SM00564 203 237 2.3 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5272 6333bf96514578b461498f5994e3544f 457 SMART SM00564 157 187 63.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5272 6333bf96514578b461498f5994e3544f 457 SMART SM00564 352 385 270.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5272 6333bf96514578b461498f5994e3544f 457 SMART SM00564 247 280 200.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB497 076e0d0f7c53ad3b73f7840347854747 368 Gene3D G3DSA:1.10.8.300 240 355 8.3E-33 T 11-11-2016 RB497 076e0d0f7c53ad3b73f7840347854747 368 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 76 210 1.4E-62 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB497 076e0d0f7c53ad3b73f7840347854747 368 SUPERFAMILY SSF52540 43 332 1.13E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB497 076e0d0f7c53ad3b73f7840347854747 368 Gene3D G3DSA:3.40.50.300 58 225 5.5E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB497 076e0d0f7c53ad3b73f7840347854747 368 PIRSF PIRSF002849 13 362 1.2E-122 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB6483 64e089736eef3b84ea57efcfe885174f 516 SUPERFAMILY SSF52540 95 392 3.13E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6483 64e089736eef3b84ea57efcfe885174f 516 SMART SM00487 47 247 3.1E-28 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB6483 64e089736eef3b84ea57efcfe885174f 516 SMART SM00490 290 371 2.3E-22 T 11-11-2016 IPR001650 Helicase, C-terminal RB6483 64e089736eef3b84ea57efcfe885174f 516 Pfam PF00270 DEAD/DEAH box helicase 53 213 2.9E-21 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB6483 64e089736eef3b84ea57efcfe885174f 516 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 40 396 1.8E-105 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RB6483 64e089736eef3b84ea57efcfe885174f 516 Gene3D G3DSA:3.40.50.300 480 505 2.7E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6483 64e089736eef3b84ea57efcfe885174f 516 Gene3D G3DSA:3.40.50.300 235 399 2.7E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6483 64e089736eef3b84ea57efcfe885174f 516 Pfam PF00271 Helicase conserved C-terminal domain 275 369 7.0E-16 T 11-11-2016 IPR001650 Helicase, C-terminal RB6483 64e089736eef3b84ea57efcfe885174f 516 Gene3D G3DSA:3.40.50.300 37 223 9.5E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB993 96062a941c37c71c3f4fb0e75343d873 339 SUPERFAMILY SSF51735 2 326 1.68E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain RB993 96062a941c37c71c3f4fb0e75343d873 339 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 5 257 3.8E-52 T 11-11-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 RB993 96062a941c37c71c3f4fb0e75343d873 339 Gene3D G3DSA:3.40.50.720 2 324 2.8E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain RB918 5cf46ef2cd05f02c4a31f8c0969a666e 292 Pfam PF00589 Phage integrase family 2 156 1.3E-45 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB918 5cf46ef2cd05f02c4a31f8c0969a666e 292 Gene3D G3DSA:1.10.443.10 6 159 6.7E-48 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB918 5cf46ef2cd05f02c4a31f8c0969a666e 292 SUPERFAMILY SSF56349 2 167 3.24E-48 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB7275 f5ac1fb1147caf82cb9f5ac60174574e 454 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 17 423 6.6E-197 T 11-11-2016 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761 RB7275 f5ac1fb1147caf82cb9f5ac60174574e 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 245 282 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RB7275 f5ac1fb1147caf82cb9f5ac60174574e 454 SUPERFAMILY SSF53383 23 423 4.87E-106 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB7275 f5ac1fb1147caf82cb9f5ac60174574e 454 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 18 425 3.8E-131 T 11-11-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761 RB7275 f5ac1fb1147caf82cb9f5ac60174574e 454 Gene3D G3DSA:3.40.640.10 69 309 7.8E-65 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB7275 f5ac1fb1147caf82cb9f5ac60174574e 454 Pfam PF00202 Aminotransferase class-III 34 420 2.0E-81 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RB7275 f5ac1fb1147caf82cb9f5ac60174574e 454 Gene3D G3DSA:3.90.1150.10 310 425 5.4E-26 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB12108 00e40c266a66f51a962be5b1db9873b2 485 Gene3D G3DSA:3.40.50.2300 21 153 1.3E-30 T 11-11-2016 RB12108 00e40c266a66f51a962be5b1db9873b2 485 SUPERFAMILY SSF52172 19 206 1.99E-40 T 11-11-2016 IPR011006 CheY-like superfamily RB12108 00e40c266a66f51a962be5b1db9873b2 485 Gene3D G3DSA:1.10.10.60 427 474 2.3E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB12108 00e40c266a66f51a962be5b1db9873b2 485 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 374 383 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB12108 00e40c266a66f51a962be5b1db9873b2 485 Pfam PF02954 Bacterial regulatory protein, Fis family 434 474 5.4E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB12108 00e40c266a66f51a962be5b1db9873b2 485 Pfam PF00072 Response regulator receiver domain 24 132 7.9E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12108 00e40c266a66f51a962be5b1db9873b2 485 Pfam PF00158 Sigma-54 interaction domain 161 328 8.8E-69 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB12108 00e40c266a66f51a962be5b1db9873b2 485 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 247 262 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB12108 00e40c266a66f51a962be5b1db9873b2 485 Gene3D G3DSA:1.10.8.60 334 411 3.7E-22 T 11-11-2016 RB12108 00e40c266a66f51a962be5b1db9873b2 485 SMART SM00448 21 132 2.8E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12108 00e40c266a66f51a962be5b1db9873b2 485 SUPERFAMILY SSF46689 401 474 1.99E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB12108 00e40c266a66f51a962be5b1db9873b2 485 SUPERFAMILY SSF52540 161 404 1.26E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12108 00e40c266a66f51a962be5b1db9873b2 485 Gene3D G3DSA:3.40.50.300 158 333 1.1E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12108 00e40c266a66f51a962be5b1db9873b2 485 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 185 198 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB12108 00e40c266a66f51a962be5b1db9873b2 485 SMART SM00382 181 324 4.1E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9732 e91c96850c85084a5a91931f63483097 609 Pfam PF00756 Putative esterase 76 283 7.8E-14 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 RB9732 e91c96850c85084a5a91931f63483097 609 SUPERFAMILY SSF53474 50 308 2.65E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9732 e91c96850c85084a5a91931f63483097 609 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 342 581 4.2E-18 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RB9732 e91c96850c85084a5a91931f63483097 609 SUPERFAMILY SSF63829 303 594 2.11E-34 T 11-11-2016 RB9732 e91c96850c85084a5a91931f63483097 609 Gene3D G3DSA:2.120.10.30 329 594 6.7E-29 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9732 e91c96850c85084a5a91931f63483097 609 Gene3D G3DSA:3.40.50.1820 49 309 3.7E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3817 c1ca402bebb5a6f53a9983337411cf70 470 PIRSF PIRSF500217 1 470 5.8E-164 T 11-11-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 RB3817 c1ca402bebb5a6f53a9983337411cf70 470 PIRSF PIRSF016636 1 470 9.8E-161 T 11-11-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB RB3817 c1ca402bebb5a6f53a9983337411cf70 470 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 146 373 4.5E-24 T 11-11-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT RB3509 6d1e4c82ec8e77afa09fafd1a9635cc2 336 SUPERFAMILY SSF52317 199 331 4.58E-40 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB3509 6d1e4c82ec8e77afa09fafd1a9635cc2 336 SUPERFAMILY SSF52317 61 171 4.58E-40 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB3509 6d1e4c82ec8e77afa09fafd1a9635cc2 336 Pfam PF06283 Trehalose utilisation 64 288 2.4E-25 T 11-11-2016 IPR029010 ThuA-like domain RB3509 6d1e4c82ec8e77afa09fafd1a9635cc2 336 Gene3D G3DSA:3.40.50.880 58 333 1.2E-39 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB10818 c9246ac80209667bf6851ca965e7743c 461 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 293 432 6.4E-29 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RB10818 c9246ac80209667bf6851ca965e7743c 461 Pfam PF01300 Telomere recombination 123 278 1.8E-9 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 RB10818 c9246ac80209667bf6851ca965e7743c 461 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 370 385 5.9E-6 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RB10818 c9246ac80209667bf6851ca965e7743c 461 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 336 352 5.9E-6 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RB10818 c9246ac80209667bf6851ca965e7743c 461 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 293 310 5.9E-6 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RB10818 c9246ac80209667bf6851ca965e7743c 461 Gene3D G3DSA:3.40.50.270 293 435 1.0E-37 T 11-11-2016 RB10818 c9246ac80209667bf6851ca965e7743c 461 SMART SM00226 291 434 1.3E-28 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RB10818 c9246ac80209667bf6851ca965e7743c 461 SUPERFAMILY SSF52788 293 435 4.06E-34 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RB10818 c9246ac80209667bf6851ca965e7743c 461 SUPERFAMILY SSF55821 41 289 1.03E-22 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RB10818 c9246ac80209667bf6851ca965e7743c 461 Gene3D G3DSA:3.90.870.10 39 289 3.3E-33 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RB1405 dcdee3fda53187d026e7f6da047c3403 521 PRINTS PR00811 Bacterial general secretion pathway protein D signature 337 361 1.6E-11 T 11-11-2016 IPR001775 GspD/PilQ family RB1405 dcdee3fda53187d026e7f6da047c3403 521 PRINTS PR00811 Bacterial general secretion pathway protein D signature 474 492 1.6E-11 T 11-11-2016 IPR001775 GspD/PilQ family RB1405 dcdee3fda53187d026e7f6da047c3403 521 PRINTS PR00811 Bacterial general secretion pathway protein D signature 273 283 1.6E-11 T 11-11-2016 IPR001775 GspD/PilQ family RB1405 dcdee3fda53187d026e7f6da047c3403 521 PRINTS PR00811 Bacterial general secretion pathway protein D signature 497 511 1.6E-11 T 11-11-2016 IPR001775 GspD/PilQ family RB1405 dcdee3fda53187d026e7f6da047c3403 521 Pfam PF00263 Bacterial type II and III secretion system protein 342 510 6.9E-44 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 RB5573 a32c1dfd4ee4f4ce9ae15b8dec636897 299 Pfam PF00892 EamA-like transporter family 146 268 1.6E-10 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RB5573 a32c1dfd4ee4f4ce9ae15b8dec636897 299 SUPERFAMILY SSF103481 43 139 4.84E-6 T 11-11-2016 RB1970 937e3ca4166390ccec74e08f2fb70b68 372 Gene3D G3DSA:3.20.20.105 2 360 4.2E-149 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RB1970 937e3ca4166390ccec74e08f2fb70b68 372 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 357 9.1E-83 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RB1970 937e3ca4166390ccec74e08f2fb70b68 372 SUPERFAMILY SSF51713 2 360 3.92E-143 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RB1970 937e3ca4166390ccec74e08f2fb70b68 372 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 361 4.2E-133 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RB1970 937e3ca4166390ccec74e08f2fb70b68 372 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 362 4.1E-140 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RB1970 937e3ca4166390ccec74e08f2fb70b68 372 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 357 51.287 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RB6199 db9651d4972ed4d89267266ead1962b6 378 SUPERFAMILY SSF51735 34 187 5.53E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6199 db9651d4972ed4d89267266ead1962b6 378 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 36 153 1.1E-28 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB6199 db9651d4972ed4d89267266ead1962b6 378 SUPERFAMILY SSF55347 162 298 5.72E-36 T 11-11-2016 RB6199 db9651d4972ed4d89267266ead1962b6 378 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 165 267 2.5E-13 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RB6199 db9651d4972ed4d89267266ead1962b6 378 Gene3D G3DSA:3.30.360.10 175 288 9.4E-52 T 11-11-2016 RB6199 db9651d4972ed4d89267266ead1962b6 378 Gene3D G3DSA:3.30.360.10 330 378 9.4E-52 T 11-11-2016 RB6199 db9651d4972ed4d89267266ead1962b6 378 Gene3D G3DSA:3.40.50.720 31 174 1.2E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 150 1.9E-29 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 SUPERFAMILY SSF50129 1 204 2.13E-61 T 11-11-2016 IPR011032 GroES-like RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 5.5E-13 T 11-11-2016 IPR027399 Alcohol dehydrogenase GroES-associated RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 Pfam PF00107 Zinc-binding dehydrogenase 196 265 1.6E-14 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 Gene3D G3DSA:3.90.180.10 1 192 5.4E-55 T 11-11-2016 IPR011032 GroES-like RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 SUPERFAMILY SSF51735 163 351 1.75E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 SMART SM00829 8 387 0.0023 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 Gene3D G3DSA:3.40.50.720 193 331 2.3E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10733 c7359262d463fbaf8eecbc0aeb2cfaac 389 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RB11969 09517bad8b0bd1483e23334429061561 381 Pfam PF02655 ATP-grasp domain 127 319 1.0E-52 T 11-11-2016 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 RB11969 09517bad8b0bd1483e23334429061561 381 Gene3D G3DSA:3.30.470.20 130 145 4.9E-5 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB11969 09517bad8b0bd1483e23334429061561 381 Gene3D G3DSA:3.30.470.20 213 317 4.9E-5 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB11969 09517bad8b0bd1483e23334429061561 381 Gene3D G3DSA:3.40.50.20 63 129 2.7E-5 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB11969 09517bad8b0bd1483e23334429061561 381 SUPERFAMILY SSF56059 122 323 1.77E-19 T 11-11-2016 RB11969 09517bad8b0bd1483e23334429061561 381 PIRSF PIRSF016766 1 379 8.0E-131 T 11-11-2016 IPR024710 Tyramine--L-glutamate ligase KEGG: 00680+6.3.4.24|MetaCyc: PWY-5254 RB5196 8c727486aaa757f30c6c1704c1fef264 701 Gene3D G3DSA:3.20.20.80 158 247 5.8E-91 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB5196 8c727486aaa757f30c6c1704c1fef264 701 Gene3D G3DSA:3.20.20.80 326 614 5.8E-91 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB5196 8c727486aaa757f30c6c1704c1fef264 701 Gene3D G3DSA:2.60.40.1180 624 699 1.4E-22 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta RB5196 8c727486aaa757f30c6c1704c1fef264 701 SMART SM00642 161 613 2.5E-25 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB5196 8c727486aaa757f30c6c1704c1fef264 701 SUPERFAMILY SSF51011 630 699 4.0E-15 T 11-11-2016 RB5196 8c727486aaa757f30c6c1704c1fef264 701 Gene3D G3DSA:3.90.400.10 248 318 3.4E-22 T 11-11-2016 RB5196 8c727486aaa757f30c6c1704c1fef264 701 Pfam PF16657 Maltogenic Amylase, C-terminal domain 623 697 4.0E-9 T 11-11-2016 IPR032091 Maltogenic Amylase, C-terminal RB5196 8c727486aaa757f30c6c1704c1fef264 701 SUPERFAMILY SSF51445 75 620 4.61E-123 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB5196 8c727486aaa757f30c6c1704c1fef264 701 Pfam PF00128 Alpha amylase, catalytic domain 176 375 8.7E-34 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB4405 27ebf090a8c3d55e48062aaa74680a7d 119 Pfam PF11338 Protein of unknown function (DUF3140) 20 111 9.0E-36 T 11-11-2016 IPR021487 Protein of unknown function DUF3140 RB6464 5a1b101a1a388d6adf5457b5073b6547 294 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 230 2.9E-38 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB6464 5a1b101a1a388d6adf5457b5073b6547 294 SUPERFAMILY SSF51735 1 292 1.62E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6464 5a1b101a1a388d6adf5457b5073b6547 294 Gene3D G3DSA:3.40.50.720 1 288 2.3E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6464 5a1b101a1a388d6adf5457b5073b6547 294 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 127 155 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB12590 7cbd68294335d68a0d69e02b321c7dee 473 SUPERFAMILY SSF53756 94 463 5.38E-74 T 11-11-2016 RB12590 7cbd68294335d68a0d69e02b321c7dee 473 Pfam PF13439 Glycosyltransferase Family 4 105 268 4.6E-23 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB12590 7cbd68294335d68a0d69e02b321c7dee 473 Pfam PF00534 Glycosyl transferases group 1 276 429 1.3E-29 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB12590 7cbd68294335d68a0d69e02b321c7dee 473 Gene3D G3DSA:3.40.50.2000 282 437 7.9E-20 T 11-11-2016 RB9089 5f847671f8d405f5491820666c06883b 233 SUPERFAMILY SSF100950 2 231 1.05E-58 T 11-11-2016 RB9089 5f847671f8d405f5491820666c06883b 233 Gene3D G3DSA:3.40.50.1360 2 230 1.5E-62 T 11-11-2016 RB9089 5f847671f8d405f5491820666c06883b 233 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 3 229 6.8E-62 T 11-11-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 RB9089 5f847671f8d405f5491820666c06883b 233 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 7 213 2.1E-66 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RB4024 d4aa6d8e7b59e9e98d4efcbea43951a6 281 SUPERFAMILY SSF53474 46 276 7.68E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4024 d4aa6d8e7b59e9e98d4efcbea43951a6 281 Pfam PF00756 Putative esterase 55 191 9.2E-18 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 RB4024 d4aa6d8e7b59e9e98d4efcbea43951a6 281 Gene3D G3DSA:3.40.50.1820 13 277 1.1E-48 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1706 009cf63b39b1d90c524a2cc193d1e905 591 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 376 403 5.4E-26 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RB1706 009cf63b39b1d90c524a2cc193d1e905 591 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 310 324 5.4E-26 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RB1706 009cf63b39b1d90c524a2cc193d1e905 591 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 342 356 5.4E-26 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RB1706 009cf63b39b1d90c524a2cc193d1e905 591 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 278 298 5.4E-26 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RB1706 009cf63b39b1d90c524a2cc193d1e905 591 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 539 558 5.4E-26 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RB1706 009cf63b39b1d90c524a2cc193d1e905 591 SMART SM00760 489 558 2.4E-24 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RB1706 009cf63b39b1d90c524a2cc193d1e905 591 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 492 558 1.0E-18 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RB1706 009cf63b39b1d90c524a2cc193d1e905 591 Gene3D G3DSA:1.10.1750.10 479 564 3.0E-20 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RB1706 009cf63b39b1d90c524a2cc193d1e905 591 Pfam PF00308 Bacterial dnaA protein 251 444 2.3E-43 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA RB1706 009cf63b39b1d90c524a2cc193d1e905 591 SMART SM00382 277 410 1.4E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1706 009cf63b39b1d90c524a2cc193d1e905 591 SUPERFAMILY SSF52540 251 457 1.14E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1706 009cf63b39b1d90c524a2cc193d1e905 591 Gene3D G3DSA:3.40.50.300 249 407 2.9E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1706 009cf63b39b1d90c524a2cc193d1e905 591 SUPERFAMILY SSF48295 479 566 9.68E-21 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 660 1.9E-181 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Hamap MF_02004 Valine--tRNA ligase [valS]. 9 1037 13.618 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 SUPERFAMILY SSF47323 725 985 1.66E-61 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 SUPERFAMILY SSF46589 972 1036 4.97E-14 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Pfam PF08264 Anticodon-binding domain of tRNA 755 912 1.1E-40 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Gene3D G3DSA:3.90.740.10 202 384 3.0E-38 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 PRINTS PR00986 Valyl-tRNA synthetase signature 403 416 1.3E-24 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 PRINTS PR00986 Valyl-tRNA synthetase signature 542 563 1.3E-24 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 PRINTS PR00986 Valyl-tRNA synthetase signature 43 54 1.3E-24 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 PRINTS PR00986 Valyl-tRNA synthetase signature 573 591 1.3E-24 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Gene3D G3DSA:1.10.287.380 966 1032 6.4E-8 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 SUPERFAMILY SSF50677 201 391 9.21E-39 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Gene3D G3DSA:1.10.730.10 715 903 4.5E-59 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 SUPERFAMILY SSF52374 8 200 1.04E-114 T 11-11-2016 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 SUPERFAMILY SSF52374 398 660 1.04E-114 T 11-11-2016 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 972 1036 2.2E-17 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Gene3D G3DSA:3.40.50.620 398 659 1.7E-120 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB1319 b4dba31f9ab81a32489adee87c441e98 1040 Gene3D G3DSA:3.40.50.620 12 201 1.7E-120 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB5647 be0571a11aa2a5dad19dfd2b0fd55984 578 Pfam PF13282 Domain of unknown function (DUF4070) 372 524 4.5E-20 T 11-11-2016 IPR025274 Domain of unknown function DUF4070 RB5647 be0571a11aa2a5dad19dfd2b0fd55984 578 SUPERFAMILY SSF102114 178 415 1.31E-27 T 11-11-2016 RB5647 be0571a11aa2a5dad19dfd2b0fd55984 578 Pfam PF04055 Radical SAM superfamily 184 340 5.2E-12 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB5647 be0571a11aa2a5dad19dfd2b0fd55984 578 Gene3D G3DSA:3.80.30.20 179 378 2.4E-32 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB5647 be0571a11aa2a5dad19dfd2b0fd55984 578 SMART SM00729 178 389 8.8E-18 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 SUPERFAMILY SSF49879 38 185 4.21E-30 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 Gene3D G3DSA:2.60.200.20 87 168 2.7E-24 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 SMART SM00267 174 346 5.2E-53 T 11-11-2016 IPR000160 GGDEF domain RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 SUPERFAMILY SSF55073 190 345 7.45E-47 T 11-11-2016 IPR029787 Nucleotide cyclase RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 345 4.7E-50 T 11-11-2016 IPR000160 GGDEF domain RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 Pfam PF00498 FHA domain 98 161 4.8E-19 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 SMART SM00240 96 146 5.5E-10 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 Gene3D G3DSA:3.30.70.270 187 345 8.6E-54 T 11-11-2016 RB12571 be3aa5f282f0793ae83172db8f1b9f80 346 Pfam PF00990 Diguanylate cyclase, GGDEF domain 187 343 2.1E-46 T 11-11-2016 IPR000160 GGDEF domain RB4161 fc18bb2c36898e9d2d23f508e0678dfb 505 Gene3D G3DSA:3.20.20.80 3 496 3.3E-176 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB4161 fc18bb2c36898e9d2d23f508e0678dfb 505 SUPERFAMILY SSF51445 5 496 2.11E-166 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB4161 fc18bb2c36898e9d2d23f508e0678dfb 505 Pfam PF02446 4-alpha-glucanotransferase 12 475 1.4E-159 T 11-11-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RB4161 fc18bb2c36898e9d2d23f508e0678dfb 505 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 5 408 1.7E-102 T 11-11-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RB11216 1a73896f4ac6aaad9f740675ab8d2d07 84 Gene3D G3DSA:3.30.70.20 3 80 9.4E-19 T 11-11-2016 RB11216 1a73896f4ac6aaad9f740675ab8d2d07 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB11216 1a73896f4ac6aaad9f740675ab8d2d07 84 Pfam PF00037 4Fe-4S binding domain 33 55 2.6E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB11216 1a73896f4ac6aaad9f740675ab8d2d07 84 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.7E-12 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 RB11216 1a73896f4ac6aaad9f740675ab8d2d07 84 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.7E-12 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 RB11216 1a73896f4ac6aaad9f740675ab8d2d07 84 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.7E-12 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 RB11216 1a73896f4ac6aaad9f740675ab8d2d07 84 SUPERFAMILY SSF54862 3 81 2.43E-20 T 11-11-2016 RB7797 be362abc2d7e8efd5951e2313fdd7d82 181 Pfam PF04542 Sigma-70 region 2 16 86 4.2E-15 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7797 be362abc2d7e8efd5951e2313fdd7d82 181 SUPERFAMILY SSF88946 1 104 1.41E-22 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7797 be362abc2d7e8efd5951e2313fdd7d82 181 Gene3D G3DSA:1.10.1740.10 1 110 1.7E-26 T 11-11-2016 RB7797 be362abc2d7e8efd5951e2313fdd7d82 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 176 3.2E-25 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7797 be362abc2d7e8efd5951e2313fdd7d82 181 SUPERFAMILY SSF88659 120 178 2.4E-5 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3251 4552cb15d55c8ea69f127cf1255518a3 739 Pfam PF00072 Response regulator receiver domain 57 168 2.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3251 4552cb15d55c8ea69f127cf1255518a3 739 SMART SM00448 55 168 1.0E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3251 4552cb15d55c8ea69f127cf1255518a3 739 Gene3D G3DSA:3.40.50.2300 53 179 6.3E-33 T 11-11-2016 RB3251 4552cb15d55c8ea69f127cf1255518a3 739 SUPERFAMILY SSF141868 489 735 5.75E-90 T 11-11-2016 IPR001633 EAL domain RB3251 4552cb15d55c8ea69f127cf1255518a3 739 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 305 466 1.0E-34 T 11-11-2016 IPR000160 GGDEF domain RB3251 4552cb15d55c8ea69f127cf1255518a3 739 Gene3D G3DSA:3.20.20.450 486 735 2.1E-100 T 11-11-2016 IPR001633 EAL domain RB3251 4552cb15d55c8ea69f127cf1255518a3 739 Gene3D G3DSA:3.30.70.270 308 477 2.6E-46 T 11-11-2016 RB3251 4552cb15d55c8ea69f127cf1255518a3 739 Gene3D G3DSA:3.30.450.20 180 307 3.8E-27 T 11-11-2016 RB3251 4552cb15d55c8ea69f127cf1255518a3 739 SUPERFAMILY SSF55785 173 301 6.81E-18 T 11-11-2016 IPR000014 PAS domain RB3251 4552cb15d55c8ea69f127cf1255518a3 739 SUPERFAMILY SSF55073 309 474 1.57E-39 T 11-11-2016 IPR029787 Nucleotide cyclase RB3251 4552cb15d55c8ea69f127cf1255518a3 739 SMART SM00267 293 473 8.5E-48 T 11-11-2016 IPR000160 GGDEF domain RB3251 4552cb15d55c8ea69f127cf1255518a3 739 Pfam PF08447 PAS fold 209 295 2.0E-13 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB3251 4552cb15d55c8ea69f127cf1255518a3 739 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 466 1.5E-40 T 11-11-2016 IPR000160 GGDEF domain RB3251 4552cb15d55c8ea69f127cf1255518a3 739 Pfam PF00563 EAL domain 490 724 6.7E-78 T 11-11-2016 IPR001633 EAL domain RB3251 4552cb15d55c8ea69f127cf1255518a3 739 SUPERFAMILY SSF52172 52 187 5.55E-33 T 11-11-2016 IPR011006 CheY-like superfamily RB3251 4552cb15d55c8ea69f127cf1255518a3 739 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 182 304 1.9E-6 T 11-11-2016 IPR000014 PAS domain RB3251 4552cb15d55c8ea69f127cf1255518a3 739 SMART SM00052 483 729 2.7E-119 T 11-11-2016 IPR001633 EAL domain RB5884 b48b03283b2a6343ad7d79b8ddef4a8b 193 SUPERFAMILY SSF110849 8 111 6.28E-25 T 11-11-2016 IPR003115 ParB/Sulfiredoxin RB5884 b48b03283b2a6343ad7d79b8ddef4a8b 193 Gene3D G3DSA:3.90.1530.10 17 87 3.1E-12 T 11-11-2016 RB5884 b48b03283b2a6343ad7d79b8ddef4a8b 193 Pfam PF02195 ParB-like nuclease domain 17 74 1.8E-8 T 11-11-2016 IPR003115 ParB/Sulfiredoxin RB5884 b48b03283b2a6343ad7d79b8ddef4a8b 193 SMART SM00470 2 82 8.5E-6 T 11-11-2016 IPR003115 ParB/Sulfiredoxin RB10002 dbdad70637354a7bace103119fdb2f1f 371 Gene3D G3DSA:3.90.180.10 5 199 3.2E-30 T 11-11-2016 IPR011032 GroES-like RB10002 dbdad70637354a7bace103119fdb2f1f 371 Pfam PF16912 Glucose dehydrogenase C-terminus 153 366 4.0E-48 T 11-11-2016 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 RB10002 dbdad70637354a7bace103119fdb2f1f 371 SUPERFAMILY SSF51735 167 311 5.79E-14 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10002 dbdad70637354a7bace103119fdb2f1f 371 SUPERFAMILY SSF50129 5 191 2.13E-28 T 11-11-2016 IPR011032 GroES-like RB10002 dbdad70637354a7bace103119fdb2f1f 371 Gene3D G3DSA:3.40.50.720 200 291 1.2E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10002 dbdad70637354a7bace103119fdb2f1f 371 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 71 85 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RB10002 dbdad70637354a7bace103119fdb2f1f 371 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 145 2.6E-10 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB2242 b340b50eafaf3674c2f541832556fefd 243 SUPERFAMILY SSF51735 1 226 7.03E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2242 b340b50eafaf3674c2f541832556fefd 243 Gene3D G3DSA:3.40.50.720 2 236 1.4E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2242 b340b50eafaf3674c2f541832556fefd 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 195 8.3E-4 T 11-11-2016 RB2242 b340b50eafaf3674c2f541832556fefd 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB2242 b340b50eafaf3674c2f541832556fefd 243 Pfam PF00106 short chain dehydrogenase 6 195 2.1E-49 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.6E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.6E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 5.6E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.6E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.6E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.6E-28 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.0E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.0E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB2242 b340b50eafaf3674c2f541832556fefd 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.0E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8479 6976060b9284ef5631f855a610e7c52e 436 Pfam PF11958 Domain of unknown function (DUF3472) 233 405 1.7E-72 T 11-11-2016 IPR021862 Protein of unknown function DUF3472 RB8479 6976060b9284ef5631f855a610e7c52e 436 Pfam PF16871 Domain of unknown function (DUF5077) 34 227 1.9E-64 T 11-11-2016 IPR031712 Domain of unknown function DUF5077 RB10508 04f9f903085b632373cf29db1c50a699 177 SUPERFAMILY SSF142433 17 167 7.06E-30 T 11-11-2016 IPR008136 CinA, C-terminal RB10508 04f9f903085b632373cf29db1c50a699 177 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 22 158 2.2E-21 T 11-11-2016 IPR008136 CinA, C-terminal RB10508 04f9f903085b632373cf29db1c50a699 177 Pfam PF02464 Competence-damaged protein 17 162 3.4E-29 T 11-11-2016 IPR008136 CinA, C-terminal RB10508 04f9f903085b632373cf29db1c50a699 177 Gene3D G3DSA:3.90.950.20 15 167 2.9E-31 T 11-11-2016 IPR008136 CinA, C-terminal RB10300 a1c21b87a8213431f1b51296bb6f978f 1043 Gene3D G3DSA:2.60.120.260 58 234 2.7E-8 T 11-11-2016 IPR008979 Galactose-binding domain-like RB10300 a1c21b87a8213431f1b51296bb6f978f 1043 Pfam PF16586 Domain of unknown function (DUF5060) 450 532 2.8E-21 T 11-11-2016 IPR032260 Domain of unknown function DUF5060 RB10300 a1c21b87a8213431f1b51296bb6f978f 1043 Pfam PF12904 Putative collagen-binding domain of a collagenase 953 1041 2.3E-9 T 11-11-2016 IPR024749 Putative collagen-binding domain RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 11-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.0E-257 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 SUPERFAMILY SSF48592 6 133 3.51E-70 T 11-11-2016 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 SUPERFAMILY SSF48592 405 520 3.51E-70 T 11-11-2016 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 SUPERFAMILY SSF54849 137 202 6.87E-21 T 11-11-2016 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 Gene3D G3DSA:3.50.7.10 196 368 8.0E-93 T 11-11-2016 IPR027409 GroEL-like apical domain RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 Gene3D G3DSA:1.10.560.10 369 517 4.6E-38 T 11-11-2016 IPR027413 GroEL-like equatorial domain RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 Gene3D G3DSA:1.10.560.10 7 195 3.1E-44 T 11-11-2016 IPR027413 GroEL-like equatorial domain RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 Hamap MF_00600 60 kDa chaperonin [groL]. 1 538 39.597 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 SUPERFAMILY SSF52029 184 375 1.23E-82 T 11-11-2016 IPR027409 GroEL-like apical domain RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 PRINTS PR00298 60kDa chaperonin signature 82 109 9.8E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 PRINTS PR00298 60kDa chaperonin signature 267 290 9.8E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 PRINTS PR00298 60kDa chaperonin signature 397 418 9.8E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 PRINTS PR00298 60kDa chaperonin signature 349 374 9.8E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 PRINTS PR00298 60kDa chaperonin signature 26 52 9.8E-73 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB10629 97371b2fbab8d72f9122cc8c5ef0e714 539 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 7.4E-96 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RB6180 bfe7ebd3ff06c24ed04cfe0639ae0c4c 100 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 42 85 4.8E-16 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RB6180 bfe7ebd3ff06c24ed04cfe0639ae0c4c 100 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 40 98 16.076 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RB6180 bfe7ebd3ff06c24ed04cfe0639ae0c4c 100 Pfam PF02416 mttA/Hcf106 family 44 90 4.9E-12 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RB6142 5d03937446ad3198c4f5e5e8938a0e37 345 PRINTS PR00069 Aldo-keto reductase signature 148 165 2.9E-5 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RB6142 5d03937446ad3198c4f5e5e8938a0e37 345 PRINTS PR00069 Aldo-keto reductase signature 117 135 2.9E-5 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RB6142 5d03937446ad3198c4f5e5e8938a0e37 345 SUPERFAMILY SSF51430 2 332 6.02E-92 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB6142 5d03937446ad3198c4f5e5e8938a0e37 345 Gene3D G3DSA:3.20.20.100 2 330 1.1E-92 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB6142 5d03937446ad3198c4f5e5e8938a0e37 345 Pfam PF00248 Aldo/keto reductase family 16 329 2.4E-66 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB3287 e5a891797621cf2204f135c496aec4df 527 SMART SM00382 29 224 9.7E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3287 e5a891797621cf2204f135c496aec4df 527 Gene3D G3DSA:3.40.50.300 3 211 5.5E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3287 e5a891797621cf2204f135c496aec4df 527 SUPERFAMILY SSF52540 5 212 1.74E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3287 e5a891797621cf2204f135c496aec4df 527 Pfam PF02405 Permease MlaE 299 524 8.9E-52 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RB3287 e5a891797621cf2204f135c496aec4df 527 Pfam PF00005 ABC transporter 20 165 3.5E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB3287 e5a891797621cf2204f135c496aec4df 527 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB4031 860616ab1dc29ee76485cb899a684b44 555 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 203 215 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB4031 860616ab1dc29ee76485cb899a684b44 555 SUPERFAMILY SSF56112 68 349 7.46E-63 T 11-11-2016 IPR011009 Protein kinase-like domain RB4031 860616ab1dc29ee76485cb899a684b44 555 Gene3D G3DSA:1.10.510.10 197 346 5.0E-40 T 11-11-2016 RB4031 860616ab1dc29ee76485cb899a684b44 555 Pfam PF00069 Protein kinase domain 72 293 5.3E-40 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB4031 860616ab1dc29ee76485cb899a684b44 555 Gene3D G3DSA:3.30.200.20 66 196 2.8E-22 T 11-11-2016 RB4031 860616ab1dc29ee76485cb899a684b44 555 SMART SM00220 71 351 8.0E-45 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2849 164ff165ec5d89f550c0a6de6d149a65 208 Gene3D G3DSA:3.40.30.10 83 180 2.7E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold RB2849 164ff165ec5d89f550c0a6de6d149a65 208 Pfam PF00085 Thioredoxin 84 180 1.3E-16 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 RB2849 164ff165ec5d89f550c0a6de6d149a65 208 SUPERFAMILY SSF52833 83 189 7.23E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11512 d822affc098dc98f2a30cdc3ceee2f57 277 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 8 269 7.3E-42 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RB11512 d822affc098dc98f2a30cdc3ceee2f57 277 Pfam PF02567 Phenazine biosynthesis-like protein 12 268 1.6E-70 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RB11512 d822affc098dc98f2a30cdc3ceee2f57 277 PIRSF PIRSF016184 5 271 2.8E-59 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RB11512 d822affc098dc98f2a30cdc3ceee2f57 277 SUPERFAMILY SSF54506 7 270 8.25E-82 T 11-11-2016 RB11512 d822affc098dc98f2a30cdc3ceee2f57 277 Gene3D G3DSA:3.10.310.10 7 129 2.6E-47 T 11-11-2016 RB11512 d822affc098dc98f2a30cdc3ceee2f57 277 Gene3D G3DSA:3.10.310.10 132 260 1.5E-42 T 11-11-2016 RB4239 67eb87dc792aebc1107dd4c1287673d3 559 SUPERFAMILY SSF49899 324 554 3.45E-25 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB4239 67eb87dc792aebc1107dd4c1287673d3 559 Pfam PF04773 FecR protein 172 254 2.7E-8 T 11-11-2016 IPR006860 FecR protein RB4239 67eb87dc792aebc1107dd4c1287673d3 559 Gene3D G3DSA:2.60.120.200 325 558 2.0E-22 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB4239 67eb87dc792aebc1107dd4c1287673d3 559 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 389 551 2.7E-15 T 11-11-2016 RB4910 8a30d3f4308ad4a5dbed79faa4900e57 115 TIGRFAM TIGR03165 F1F0_chp_2: F1/F0 ATPase, Methanosarcina type, subunit 2 8 89 5.9E-28 T 11-11-2016 IPR017581 N-ATPase, AtpR subunit-like RB4910 8a30d3f4308ad4a5dbed79faa4900e57 115 Pfam PF12966 N-ATPase, AtpR subunit 8 86 1.8E-17 T 11-11-2016 IPR017581 N-ATPase, AtpR subunit-like RB9520 df10ec8701819c60807e5ba57423441c 532 SUPERFAMILY SSF56935 191 529 5.01E-14 T 11-11-2016 RB9520 df10ec8701819c60807e5ba57423441c 532 Pfam PF02530 Porin subfamily 187 374 8.8E-5 T 11-11-2016 IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 RB11371 9d75487ab44b35af3ef22077f7bb1a59 1151 Pfam PF04851 Type III restriction enzyme, res subunit 368 505 1.7E-14 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RB11371 9d75487ab44b35af3ef22077f7bb1a59 1151 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 10 225 1.4E-28 T 11-11-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RB11371 9d75487ab44b35af3ef22077f7bb1a59 1151 Pfam PF11867 Domain of unknown function (DUF3387) 815 1108 8.7E-27 T 11-11-2016 IPR021810 Protein of unknown function DUF3387 RB11371 9d75487ab44b35af3ef22077f7bb1a59 1151 Gene3D G3DSA:3.40.50.300 354 513 4.9E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11371 9d75487ab44b35af3ef22077f7bb1a59 1151 SMART SM00487 301 537 0.0013 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB11371 9d75487ab44b35af3ef22077f7bb1a59 1151 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 367 804 5.1E-91 T 11-11-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RB11371 9d75487ab44b35af3ef22077f7bb1a59 1151 SUPERFAMILY SSF52540 244 299 1.57E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11371 9d75487ab44b35af3ef22077f7bb1a59 1151 SUPERFAMILY SSF52540 365 510 1.57E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9344 c6740061636be1de3ab28ec15ed7ab20 1386 Pfam PF00271 Helicase conserved C-terminal domain 1223 1332 7.2E-19 T 11-11-2016 IPR001650 Helicase, C-terminal RB9344 c6740061636be1de3ab28ec15ed7ab20 1386 SUPERFAMILY SSF52540 923 1141 1.08E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9344 c6740061636be1de3ab28ec15ed7ab20 1386 SUPERFAMILY SSF52540 1142 1375 4.07E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9344 c6740061636be1de3ab28ec15ed7ab20 1386 Gene3D G3DSA:3.40.50.300 1220 1365 1.1E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9344 c6740061636be1de3ab28ec15ed7ab20 1386 SMART SM00490 1250 1332 1.4E-24 T 11-11-2016 IPR001650 Helicase, C-terminal RB9344 c6740061636be1de3ab28ec15ed7ab20 1386 SMART SM00487 930 1113 4.3E-29 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB9344 c6740061636be1de3ab28ec15ed7ab20 1386 Gene3D G3DSA:3.40.50.300 921 1099 4.2E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9344 c6740061636be1de3ab28ec15ed7ab20 1386 Pfam PF00176 SNF2 family N-terminal domain 952 1211 8.9E-56 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 SUPERFAMILY SSF51735 178 411 2.83E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 Gene3D G3DSA:3.40.192.10 34 174 1.8E-51 T 11-11-2016 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 SMART SM00839 178 411 2.6E-108 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 SUPERFAMILY SSF53223 3 177 3.84E-62 T 11-11-2016 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 PIRSF PIRSF000185 1 413 1.8E-156 T 11-11-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 31 158 2.5E-50 T 11-11-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 Gene3D G3DSA:3.40.50.720 177 412 4.5E-78 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 96 109 - T 11-11-2016 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 167 189 4.1E-32 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 88 102 4.1E-32 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 209 229 4.1E-32 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 339 350 4.1E-32 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RB6930 5035f5f3bc8d47f8aa9af3da17dd5816 413 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 177 411 9.5E-65 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 ProSitePatterns PS00018 EF-hand calcium-binding domain. 223 235 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 Gene3D G3DSA:1.10.238.10 209 243 9.5E-13 T 11-11-2016 IPR011992 EF-hand domain pair RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 Gene3D G3DSA:1.10.238.10 407 467 9.5E-13 T 11-11-2016 IPR011992 EF-hand domain pair RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 Gene3D G3DSA:1.10.238.10 305 342 9.5E-13 T 11-11-2016 IPR011992 EF-hand domain pair RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 ProSitePatterns PS00018 EF-hand calcium-binding domain. 247 259 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 ProSitePatterns PS00018 EF-hand calcium-binding domain. 426 438 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 ProSitePatterns PS00018 EF-hand calcium-binding domain. 449 461 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 SUPERFAMILY SSF47473 407 444 6.97E-14 T 11-11-2016 IPR011992 EF-hand domain pair RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 SUPERFAMILY SSF47473 313 368 6.97E-14 T 11-11-2016 IPR011992 EF-hand domain pair RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 SUPERFAMILY SSF47473 202 252 6.97E-14 T 11-11-2016 IPR011992 EF-hand domain pair RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 Gene3D G3DSA:1.10.238.10 245 275 8.3E-5 T 11-11-2016 IPR011992 EF-hand domain pair RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 ProSitePatterns PS00018 EF-hand calcium-binding domain. 321 333 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 ProSitePatterns PS00018 EF-hand calcium-binding domain. 349 361 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 Pfam PF13202 EF hand 425 441 0.14 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 Pfam PF13202 EF hand 246 261 0.0077 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB1337 8ce84ee8b2b8af4c73aa1ff8e10cd5e9 471 Pfam PF13202 EF hand 317 333 0.096 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB5655 c9b32ff8b5f862660101c87caf9f9388 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.3E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB5655 c9b32ff8b5f862660101c87caf9f9388 325 Gene3D G3DSA:1.10.10.10 3 85 1.5E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB5655 c9b32ff8b5f862660101c87caf9f9388 325 Gene3D G3DSA:3.40.190.10 178 260 1.2E-21 T 11-11-2016 RB5655 c9b32ff8b5f862660101c87caf9f9388 325 Gene3D G3DSA:3.40.190.10 92 177 4.8E-18 T 11-11-2016 RB5655 c9b32ff8b5f862660101c87caf9f9388 325 SUPERFAMILY SSF53850 91 293 5.43E-42 T 11-11-2016 RB5655 c9b32ff8b5f862660101c87caf9f9388 325 Pfam PF03466 LysR substrate binding domain 89 286 2.1E-42 T 11-11-2016 IPR005119 LysR, substrate-binding RB5655 c9b32ff8b5f862660101c87caf9f9388 325 SUPERFAMILY SSF46785 3 111 6.8E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB5655 c9b32ff8b5f862660101c87caf9f9388 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB5655 c9b32ff8b5f862660101c87caf9f9388 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB5655 c9b32ff8b5f862660101c87caf9f9388 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB9971 2f9826b43bcc79074a9ea809d671d84e 456 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 48 166 3.0E-20 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB9971 2f9826b43bcc79074a9ea809d671d84e 456 SUPERFAMILY SSF51735 26 196 1.27E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9971 2f9826b43bcc79074a9ea809d671d84e 456 Gene3D G3DSA:3.40.50.720 44 186 6.6E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9971 2f9826b43bcc79074a9ea809d671d84e 456 Gene3D G3DSA:3.30.360.10 187 427 2.9E-16 T 11-11-2016 RB9971 2f9826b43bcc79074a9ea809d671d84e 456 SUPERFAMILY SSF55347 176 351 1.06E-13 T 11-11-2016 RB8049 46067a53ea675332ac6d2163cd93f5d9 156 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 71.557 T 11-11-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RB8049 46067a53ea675332ac6d2163cd93f5d9 156 Pfam PF03477 ATP cone domain 50 136 1.6E-20 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 RB8049 46067a53ea675332ac6d2163cd93f5d9 156 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 5.5E-52 T 11-11-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 Pfam PF01493 GXGXG motif 1278 1463 1.0E-86 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 Pfam PF00310 Glutamine amidotransferases class-II 25 450 2.2E-184 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 SUPERFAMILY SSF69336 1245 1511 3.27E-96 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 Gene3D G3DSA:2.160.20.60 1252 1517 3.7E-106 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 SUPERFAMILY SSF51395 465 1229 2.52E-268 T 11-11-2016 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 Gene3D G3DSA:3.20.20.70 465 805 3.3E-108 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 Pfam PF04898 Glutamate synthase central domain 478 761 1.6E-117 T 11-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 Gene3D G3DSA:3.60.20.10 25 461 1.9E-192 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 Pfam PF01645 Conserved region in glutamate synthase 825 1195 1.2E-154 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 Gene3D G3DSA:3.20.20.70 873 1235 5.0E-182 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB5654 a0ce9b114c4d28f0c2be804a3b1537cd 1521 SUPERFAMILY SSF56235 25 453 2.7E-151 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 SUPERFAMILY SSF52540 472 641 5.32E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 Gene3D G3DSA:2.40.30.10 243 327 6.4E-15 T 11-11-2016 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 Gene3D G3DSA:3.40.50.300 10 233 1.3E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 460 640 1.3E-53 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 SUPERFAMILY SSF50465 333 433 1.63E-32 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 Gene3D G3DSA:3.40.50.300 459 646 2.2E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 432 5.2E-185 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 PRINTS PR00315 GTP-binding elongation factor signature 107 117 3.5E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 PRINTS PR00315 GTP-binding elongation factor signature 123 134 3.5E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 PRINTS PR00315 GTP-binding elongation factor signature 87 95 3.5E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 PRINTS PR00315 GTP-binding elongation factor signature 160 169 3.5E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 PRINTS PR00315 GTP-binding elongation factor signature 26 39 3.5E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 SUPERFAMILY SSF52540 16 234 3.21E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 Gene3D G3DSA:2.40.30.10 331 433 4.7E-5 T 11-11-2016 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 SUPERFAMILY SSF50447 243 328 1.63E-22 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 472 644 31.585 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 473 53.402 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 Pfam PF00009 Elongation factor Tu GTP binding domain 23 212 1.4E-41 T 11-11-2016 RB7941 a65221dfa988e4d54d3ea50ce50fac88 647 Pfam PF01583 Adenylylsulphate kinase 474 626 5.1E-53 T 11-11-2016 RB10841 005ef570b66e2b4e5c082754b3ef39ff 443 SUPERFAMILY SSF55729 165 336 1.27E-13 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10841 005ef570b66e2b4e5c082754b3ef39ff 443 Pfam PF13480 Acetyltransferase (GNAT) domain 175 323 1.7E-24 T 11-11-2016 RB12646 e1cb0cd50bca016e08d6426496e858fb 497 SUPERFAMILY SSF55874 101 262 5.76E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12646 e1cb0cd50bca016e08d6426496e858fb 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 155 262 3.8E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12646 e1cb0cd50bca016e08d6426496e858fb 497 SMART SM00387 154 263 1.9E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12646 e1cb0cd50bca016e08d6426496e858fb 497 Gene3D G3DSA:1.10.287.130 42 91 2.4E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB12646 e1cb0cd50bca016e08d6426496e858fb 497 SMART SM00388 39 107 4.8E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB12646 e1cb0cd50bca016e08d6426496e858fb 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 247 260 2.0E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12646 e1cb0cd50bca016e08d6426496e858fb 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 223 241 2.0E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12646 e1cb0cd50bca016e08d6426496e858fb 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 193 207 2.0E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12646 e1cb0cd50bca016e08d6426496e858fb 497 Gene3D G3DSA:3.30.565.10 92 262 3.1E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12646 e1cb0cd50bca016e08d6426496e858fb 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 42 107 5.4E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB12646 e1cb0cd50bca016e08d6426496e858fb 497 SUPERFAMILY SSF47384 42 107 1.43E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9404 96e486935e385f9bca5919d3ed533704 420 SUPERFAMILY SSF63411 3 205 9.17E-49 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RB9404 96e486935e385f9bca5919d3ed533704 420 Gene3D G3DSA:3.30.830.10 7 215 7.0E-49 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 RB9404 96e486935e385f9bca5919d3ed533704 420 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 35 58 - T 11-11-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RB9404 96e486935e385f9bca5919d3ed533704 420 Pfam PF00675 Insulinase (Peptidase family M16) 24 160 2.8E-32 T 11-11-2016 IPR011765 Peptidase M16, N-terminal RB9404 96e486935e385f9bca5919d3ed533704 420 Pfam PF05193 Peptidase M16 inactive domain 167 345 1.5E-17 T 11-11-2016 IPR007863 Peptidase M16, C-terminal RB9404 96e486935e385f9bca5919d3ed533704 420 SUPERFAMILY SSF63411 239 408 1.83E-24 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RB9404 96e486935e385f9bca5919d3ed533704 420 Gene3D G3DSA:3.30.830.10 241 407 2.7E-21 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 RB6101 071f7ed64896681983aaecd3b3e0df10 439 SUPERFAMILY SSF53649 309 416 3.31E-12 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6101 071f7ed64896681983aaecd3b3e0df10 439 Pfam PF07394 Protein of unknown function (DUF1501) 50 438 1.0E-110 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB5571 6081783b2e1baf6dfd00807c07f4ad79 743 SMART SM00228 197 272 0.41 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5571 6081783b2e1baf6dfd00807c07f4ad79 743 SMART SM00228 381 445 0.0018 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5571 6081783b2e1baf6dfd00807c07f4ad79 743 SMART SM00228 478 545 21.0 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5571 6081783b2e1baf6dfd00807c07f4ad79 743 Gene3D G3DSA:2.30.42.10 175 279 5.8E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5571 6081783b2e1baf6dfd00807c07f4ad79 743 Pfam PF02163 Peptidase family M50 64 730 8.4E-60 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 RB5571 6081783b2e1baf6dfd00807c07f4ad79 743 Gene3D G3DSA:2.30.42.10 375 463 4.2E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5571 6081783b2e1baf6dfd00807c07f4ad79 743 SUPERFAMILY SSF50156 370 460 1.03E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5571 6081783b2e1baf6dfd00807c07f4ad79 743 SUPERFAMILY SSF50156 190 278 4.21E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6446 cbaff44f1c81bf7ce033244693cabee9 346 SUPERFAMILY SSF53300 78 240 2.91E-20 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6446 cbaff44f1c81bf7ce033244693cabee9 346 Gene3D G3DSA:3.40.50.410 104 229 1.1E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6446 cbaff44f1c81bf7ce033244693cabee9 346 Pfam PF01882 Protein of unknown function DUF58 43 139 1.4E-19 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB6446 cbaff44f1c81bf7ce033244693cabee9 346 SMART SM00327 81 258 7.4E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB13118 184608fbaf17ddbeb74bd4f79e1d0fac 210 SUPERFAMILY SSF52172 13 195 1.28E-41 T 11-11-2016 IPR011006 CheY-like superfamily RB13118 184608fbaf17ddbeb74bd4f79e1d0fac 210 Pfam PF00072 Response regulator receiver domain 22 124 1.4E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13118 184608fbaf17ddbeb74bd4f79e1d0fac 210 SMART SM01012 141 196 7.1E-18 T 11-11-2016 IPR005561 ANTAR domain GO:0003723 RB13118 184608fbaf17ddbeb74bd4f79e1d0fac 210 Pfam PF03861 ANTAR domain 144 195 7.6E-16 T 11-11-2016 IPR005561 ANTAR domain GO:0003723 RB13118 184608fbaf17ddbeb74bd4f79e1d0fac 210 Gene3D G3DSA:1.10.10.10 148 202 1.0E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB13118 184608fbaf17ddbeb74bd4f79e1d0fac 210 PIRSF PIRSF036382 3 203 8.6E-60 T 11-11-2016 IPR008327 Signal transduction response regulator, antiterminator RB13118 184608fbaf17ddbeb74bd4f79e1d0fac 210 SMART SM00448 14 125 2.0E-7 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13118 184608fbaf17ddbeb74bd4f79e1d0fac 210 Gene3D G3DSA:3.40.50.2300 15 147 6.8E-17 T 11-11-2016 RB9882 aec793193a01e1dab583a9be0349ccb4 419 Gene3D G3DSA:2.120.10.30 390 409 9.1E-26 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9882 aec793193a01e1dab583a9be0349ccb4 419 Gene3D G3DSA:2.120.10.30 96 327 9.1E-26 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9882 aec793193a01e1dab583a9be0349ccb4 419 SUPERFAMILY SSF63829 390 409 5.1E-14 T 11-11-2016 RB9882 aec793193a01e1dab583a9be0349ccb4 419 SUPERFAMILY SSF63829 82 317 5.1E-14 T 11-11-2016 RB3265 9fa9777771010f4b352cd97bad633afb 358 Gene3D G3DSA:3.30.360.10 149 354 7.2E-16 T 11-11-2016 RB3265 9fa9777771010f4b352cd97bad633afb 358 Gene3D G3DSA:3.40.50.720 1 148 7.1E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3265 9fa9777771010f4b352cd97bad633afb 358 SUPERFAMILY SSF51735 3 155 1.12E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3265 9fa9777771010f4b352cd97bad633afb 358 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 125 1.2E-14 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB3265 9fa9777771010f4b352cd97bad633afb 358 SUPERFAMILY SSF55347 141 303 4.41E-14 T 11-11-2016 RB8326 723271a8019ecfe1fb8c0c9103c1e9a1 780 Gene3D G3DSA:3.30.200.20 69 137 4.2E-23 T 11-11-2016 RB8326 723271a8019ecfe1fb8c0c9103c1e9a1 780 Pfam PF00069 Protein kinase domain 72 326 8.7E-51 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8326 723271a8019ecfe1fb8c0c9103c1e9a1 780 Gene3D G3DSA:1.10.510.10 138 329 2.0E-48 T 11-11-2016 RB8326 723271a8019ecfe1fb8c0c9103c1e9a1 780 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 78 101 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB8326 723271a8019ecfe1fb8c0c9103c1e9a1 780 SMART SM00220 72 336 2.2E-65 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8326 723271a8019ecfe1fb8c0c9103c1e9a1 780 SUPERFAMILY SSF56112 69 337 1.23E-71 T 11-11-2016 IPR011009 Protein kinase-like domain RB3174 815b9ceb2c3df14620fb6c9bd4a05e18 395 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 122 136 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RB3174 815b9ceb2c3df14620fb6c9bd4a05e18 395 SUPERFAMILY SSF55120 86 251 2.47E-38 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB3174 815b9ceb2c3df14620fb6c9bd4a05e18 395 Gene3D G3DSA:3.10.290.10 26 87 5.1E-21 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB3174 815b9ceb2c3df14620fb6c9bd4a05e18 395 SUPERFAMILY SSF55174 25 116 4.42E-18 T 11-11-2016 RB3174 815b9ceb2c3df14620fb6c9bd4a05e18 395 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 90 248 2.3E-46 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RB3174 815b9ceb2c3df14620fb6c9bd4a05e18 395 Pfam PF01479 S4 domain 26 68 2.2E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB3174 815b9ceb2c3df14620fb6c9bd4a05e18 395 Pfam PF00849 RNA pseudouridylate synthase 86 216 4.5E-17 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB3174 815b9ceb2c3df14620fb6c9bd4a05e18 395 SMART SM00363 25 85 9.4E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB9402 4266a0614741f697e82855007c46456d 432 Gene3D G3DSA:3.30.830.10 247 422 3.3E-30 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 RB9402 4266a0614741f697e82855007c46456d 432 Pfam PF00675 Insulinase (Peptidase family M16) 63 167 3.9E-6 T 11-11-2016 IPR011765 Peptidase M16, N-terminal RB9402 4266a0614741f697e82855007c46456d 432 Pfam PF05193 Peptidase M16 inactive domain 186 354 3.3E-28 T 11-11-2016 IPR007863 Peptidase M16, C-terminal RB9402 4266a0614741f697e82855007c46456d 432 Gene3D G3DSA:3.30.830.10 19 241 7.2E-29 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 RB9402 4266a0614741f697e82855007c46456d 432 SUPERFAMILY SSF63411 7 225 4.54E-36 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RB9402 4266a0614741f697e82855007c46456d 432 SUPERFAMILY SSF63411 247 423 2.17E-35 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RB10226 84909eb17eca7ed2b936131e35e4226f 386 Gene3D G3DSA:3.30.70.1290 46 83 4.3E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB10226 84909eb17eca7ed2b936131e35e4226f 386 Gene3D G3DSA:3.30.70.1290 136 191 4.3E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB10226 84909eb17eca7ed2b936131e35e4226f 386 SUPERFAMILY SSF143422 135 193 1.96E-15 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB10226 84909eb17eca7ed2b936131e35e4226f 386 SUPERFAMILY SSF143422 17 82 1.96E-15 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 Pfam PF12848 ABC transporter 207 280 1.3E-8 T 11-11-2016 IPR032781 ABC-transporter extension domain RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 Gene3D G3DSA:3.40.50.300 2 265 3.9E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 Pfam PF00005 ABC transporter 17 168 1.5E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 Pfam PF00005 ABC transporter 324 454 4.9E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 Pfam PF16326 ABC transporter C-terminal domain 555 624 2.0E-20 T 11-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 SUPERFAMILY SSF52540 301 498 4.26E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 SMART SM00382 26 213 1.8E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 SMART SM00382 329 499 1.6E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 SUPERFAMILY SSF52540 2 216 1.5E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5055 024de696fe1aa15d1e7731200dfd5d3c 625 Gene3D G3DSA:3.40.50.300 304 497 7.6E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5294 59ee9b30c909021aeaa64e991b2f3767 533 Gene3D G3DSA:3.40.720.10 41 141 1.1E-31 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5294 59ee9b30c909021aeaa64e991b2f3767 533 Pfam PF00884 Sulfatase 162 305 3.4E-23 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB5294 59ee9b30c909021aeaa64e991b2f3767 533 Pfam PF00884 Sulfatase 44 142 6.8E-22 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB5294 59ee9b30c909021aeaa64e991b2f3767 533 Gene3D G3DSA:3.40.720.10 164 343 6.6E-37 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5294 59ee9b30c909021aeaa64e991b2f3767 533 Gene3D G3DSA:3.30.1120.10 344 360 2.8E-16 T 11-11-2016 RB5294 59ee9b30c909021aeaa64e991b2f3767 533 Gene3D G3DSA:3.30.1120.10 400 441 2.8E-16 T 11-11-2016 RB5294 59ee9b30c909021aeaa64e991b2f3767 533 Pfam PF16347 Domain of unknown function (DUF4976) 395 440 4.1E-8 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB5294 59ee9b30c909021aeaa64e991b2f3767 533 SUPERFAMILY SSF53649 42 358 1.05E-92 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5294 59ee9b30c909021aeaa64e991b2f3767 533 SUPERFAMILY SSF53649 398 440 1.05E-92 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9505 b6a114512f5edf50d8621f060eaf52d7 209 SUPERFAMILY SSF48452 21 114 3.16E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9505 b6a114512f5edf50d8621f060eaf52d7 209 Pfam PF07719 Tetratricopeptide repeat 68 96 1.3E-5 T 11-11-2016 IPR013105 Tetratricopeptide repeat 2 RB9505 b6a114512f5edf50d8621f060eaf52d7 209 SMART SM00028 68 101 9.7E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9505 b6a114512f5edf50d8621f060eaf52d7 209 Gene3D G3DSA:1.25.40.10 21 114 1.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6962 ef9a613836fc54cc026b33a3a83bb9a6 297 Gene3D G3DSA:1.10.10.10 207 263 1.5E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6962 ef9a613836fc54cc026b33a3a83bb9a6 297 SUPERFAMILY SSF46785 207 261 6.42E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6962 ef9a613836fc54cc026b33a3a83bb9a6 297 Pfam PF04079 Segregation and condensation complex subunit ScpB 127 291 1.1E-36 T 11-11-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RB6962 ef9a613836fc54cc026b33a3a83bb9a6 297 SUPERFAMILY SSF46785 125 198 1.68E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6962 ef9a613836fc54cc026b33a3a83bb9a6 297 Gene3D G3DSA:1.10.10.10 124 201 2.8E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB281 85a68d4a4878028970f8fbef52ab3540 109 Gene3D G3DSA:2.30.33.40 14 102 1.1E-12 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB281 85a68d4a4878028970f8fbef52ab3540 109 PRINTS PR00297 10kDa chaperonin signature 89 102 4.3E-7 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB281 85a68d4a4878028970f8fbef52ab3540 109 PRINTS PR00297 10kDa chaperonin signature 14 29 4.3E-7 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB281 85a68d4a4878028970f8fbef52ab3540 109 PRINTS PR00297 10kDa chaperonin signature 36 57 4.3E-7 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB281 85a68d4a4878028970f8fbef52ab3540 109 SUPERFAMILY SSF50129 12 103 5.89E-14 T 11-11-2016 IPR011032 GroES-like RB281 85a68d4a4878028970f8fbef52ab3540 109 Pfam PF00166 Chaperonin 10 Kd subunit 14 102 7.2E-18 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB281 85a68d4a4878028970f8fbef52ab3540 109 SMART SM00883 13 102 3.4E-13 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB1208 93a2593bf896ade4e0d889d496b92dc9 316 Pfam PF07589 PEP-CTERM motif 283 307 1.4E-6 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB1208 93a2593bf896ade4e0d889d496b92dc9 316 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 284 308 2.1E-5 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB4606 d23cb359c20e4e73e8985752319f702e 211 Pfam PF13899 Thioredoxin-like 101 157 3.9E-8 T 11-11-2016 RB4606 d23cb359c20e4e73e8985752319f702e 211 SUPERFAMILY SSF52833 98 203 9.29E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4606 d23cb359c20e4e73e8985752319f702e 211 Gene3D G3DSA:3.40.30.10 101 203 7.0E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8465 9d7ce0d9ec47dfcacbc231ad2edcbcdd 184 Gene3D G3DSA:1.10.10.10 36 116 2.4E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8465 9d7ce0d9ec47dfcacbc231ad2edcbcdd 184 SUPERFAMILY SSF46785 36 169 2.84E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8465 9d7ce0d9ec47dfcacbc231ad2edcbcdd 184 Pfam PF01475 Ferric uptake regulator family 45 163 2.3E-23 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 Pfam PF00701 Dihydrodipicolinate synthetase family 15 296 8.6E-92 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 14 298 61.369 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 SUPERFAMILY SSF51569 14 299 6.59E-99 T 11-11-2016 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 Gene3D G3DSA:3.20.20.70 14 301 1.2E-112 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 SMART SM01130 14 300 8.3E-137 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 115 131 1.4E-32 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 83 101 1.4E-32 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 47 68 1.4E-32 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 PRINTS PR00146 Dihydrodipicolinate synthase signature 140 157 1.4E-32 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 PIRSF PIRSF001365 10 308 8.4E-93 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB2746 338ae714e1626f3246afd9c1a8c9d477 314 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 18 297 5.1E-104 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 Gene3D G3DSA:3.50.50.60 3 136 2.2E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.5E-51 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PIRSF PIRSF000350 1 449 1.9E-64 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 Gene3D G3DSA:3.50.50.60 137 326 1.6E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 SUPERFAMILY SSF55424 338 450 3.44E-28 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 SUPERFAMILY SSF51905 1 329 8.1E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 320 8.8E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.6E-19 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 2.6E-19 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 2.6E-19 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.6E-19 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.6E-19 T 11-11-2016 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 Gene3D G3DSA:3.30.390.30 327 450 4.7E-29 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB4396 fc3c8757fb9abaa1e4fd06de01964bef 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 448 1.5E-21 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB2394 8bffe26e1b075b711c1d61f7055dd0ca 236 Pfam PF13189 Cytidylate kinase-like family 43 211 1.2E-40 T 11-11-2016 IPR026865 Cytidylate kinase-like family MetaCyc: PWY-7205 RB2394 8bffe26e1b075b711c1d61f7055dd0ca 236 SUPERFAMILY SSF52540 48 226 2.1E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2394 8bffe26e1b075b711c1d61f7055dd0ca 236 Gene3D G3DSA:3.40.50.300 41 229 2.4E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9298 ca728f55893c6a32b71cc3149c3e000d 330 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 2.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB9298 ca728f55893c6a32b71cc3149c3e000d 330 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 24 3.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB9298 ca728f55893c6a32b71cc3149c3e000d 330 Gene3D G3DSA:3.30.700.10 5 63 6.8E-7 T 11-11-2016 RB9298 ca728f55893c6a32b71cc3149c3e000d 330 SUPERFAMILY SSF54523 5 129 2.83E-21 T 11-11-2016 RB9298 ca728f55893c6a32b71cc3149c3e000d 330 Pfam PF07596 Protein of unknown function (DUF1559) 29 312 1.3E-57 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 SUPERFAMILY SSF50998 183 472 1.41E-54 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB5920 e0e7a622df82607deddcaa0a339d62f7 683 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 372 386 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB5920 e0e7a622df82607deddcaa0a339d62f7 683 SMART SM00320 304 343 9.4E-6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 SMART SM00320 428 467 170.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 SMART SM00320 216 255 7.5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 SMART SM00320 346 385 4.4E-10 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 SMART SM00320 262 301 9.7 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 SMART SM00320 388 426 7.8E-7 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 Pfam PF12894 Anaphase-promoting complex subunit 4 WD40 domain 354 408 4.3E-8 T 11-11-2016 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain RB5920 e0e7a622df82607deddcaa0a339d62f7 683 SUPERFAMILY SSF46626 29 136 3.22E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 PRINTS PR00320 G protein beta WD-40 repeat signature 413 427 3.8E-5 T 11-11-2016 IPR020472 G-protein beta WD-40 repeat RB5920 e0e7a622df82607deddcaa0a339d62f7 683 PRINTS PR00320 G protein beta WD-40 repeat signature 372 386 3.8E-5 T 11-11-2016 IPR020472 G-protein beta WD-40 repeat RB5920 e0e7a622df82607deddcaa0a339d62f7 683 PRINTS PR00320 G protein beta WD-40 repeat signature 330 344 3.8E-5 T 11-11-2016 IPR020472 G-protein beta WD-40 repeat RB5920 e0e7a622df82607deddcaa0a339d62f7 683 Pfam PF07635 Planctomycete cytochrome C 62 119 4.2E-15 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB5920 e0e7a622df82607deddcaa0a339d62f7 683 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 413 427 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB5920 e0e7a622df82607deddcaa0a339d62f7 683 Pfam PF00400 WD domain, G-beta repeat 311 342 0.02 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5920 e0e7a622df82607deddcaa0a339d62f7 683 Gene3D G3DSA:2.130.10.10 183 473 3.0E-59 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB10507 31db8e003bab5b69ca6ddd9c9c9ddb24 645 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 548 639 7.8E-23 T 11-11-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain RB10507 31db8e003bab5b69ca6ddd9c9c9ddb24 645 Pfam PF10566 Glycoside hydrolase 97 312 546 2.2E-49 T 11-11-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain RB10507 31db8e003bab5b69ca6ddd9c9c9ddb24 645 Gene3D G3DSA:3.20.20.70 317 432 1.3E-7 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB10507 31db8e003bab5b69ca6ddd9c9c9ddb24 645 SUPERFAMILY SSF51445 315 521 2.95E-15 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB10507 31db8e003bab5b69ca6ddd9c9c9ddb24 645 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 62 300 2.6E-49 T 11-11-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain RB11367 6890ccefb7e8415039d4623fbb4aee7e 1274 Gene3D G3DSA:1.25.40.10 171 270 4.8E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11367 6890ccefb7e8415039d4623fbb4aee7e 1274 SMART SM00028 391 424 0.5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11367 6890ccefb7e8415039d4623fbb4aee7e 1274 SMART SM00028 237 270 100.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11367 6890ccefb7e8415039d4623fbb4aee7e 1274 SMART SM00028 203 236 1.2 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11367 6890ccefb7e8415039d4623fbb4aee7e 1274 Gene3D G3DSA:1.25.40.10 304 450 4.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11367 6890ccefb7e8415039d4623fbb4aee7e 1274 SUPERFAMILY SSF48452 207 276 6.56E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11367 6890ccefb7e8415039d4623fbb4aee7e 1274 SUPERFAMILY SSF48452 391 450 6.56E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11367 6890ccefb7e8415039d4623fbb4aee7e 1274 SUPERFAMILY SSF48452 308 335 6.56E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6384 9e6f149e0121e051efa4bcc96b714f29 451 Pfam PF00578 AhpC/TSA family 290 405 2.8E-22 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB6384 9e6f149e0121e051efa4bcc96b714f29 451 Gene3D G3DSA:3.40.30.10 286 425 1.9E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6384 9e6f149e0121e051efa4bcc96b714f29 451 Pfam PF09865 Predicted periplasmic protein (DUF2092) 49 267 3.7E-10 T 11-11-2016 IPR019207 Protein of unknown function DUF2092, periplasmic RB6384 9e6f149e0121e051efa4bcc96b714f29 451 SUPERFAMILY SSF52833 286 430 6.37E-35 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6395 170d297a6f39d88db3bdf16193ae054e 778 SUPERFAMILY SSF48452 320 352 8.15E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SUPERFAMILY SSF48452 389 541 8.15E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 Gene3D G3DSA:1.25.40.10 261 369 2.2E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 Pfam PF13429 Tetratricopeptide repeat 379 527 5.5E-8 T 11-11-2016 RB6395 170d297a6f39d88db3bdf16193ae054e 778 Pfam PF13374 Tetratricopeptide repeat 697 730 0.005 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 Gene3D G3DSA:1.25.40.10 631 726 2.1E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 Gene3D G3DSA:1.25.40.10 567 630 4.7E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 Gene3D G3DSA:1.25.40.10 463 566 4.8E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 Pfam PF13432 Tetratricopeptide repeat 583 643 6.8E-10 T 11-11-2016 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SMART SM00028 579 612 18.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SMART SM00028 407 440 9.5E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SMART SM00028 508 541 1.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SMART SM00028 695 728 76.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SMART SM00028 474 507 0.077 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SMART SM00028 613 646 0.006 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SMART SM00028 376 406 170.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SUPERFAMILY SSF48452 698 728 1.8E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 SUPERFAMILY SSF48452 477 649 1.8E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6395 170d297a6f39d88db3bdf16193ae054e 778 Gene3D G3DSA:1.25.40.10 370 462 5.6E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11047 3495c841c272106dce0fd5e45d090b79 329 Gene3D G3DSA:3.40.50.300 52 315 5.9E-107 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11047 3495c841c272106dce0fd5e45d090b79 329 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 74 299 1.9E-112 T 11-11-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 RB11047 3495c841c272106dce0fd5e45d090b79 329 SUPERFAMILY SSF52540 106 294 1.5E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11047 3495c841c272106dce0fd5e45d090b79 329 PIRSF PIRSF028756 39 329 2.9E-131 T 11-11-2016 IPR016898 Polyphosphate kinase 2 RB11047 3495c841c272106dce0fd5e45d090b79 329 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 75 299 1.1E-110 T 11-11-2016 IPR022488 Polyphosphate kinase-2-related RB841 537ec27cee7f1c972311a17a791f6ef9 835 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 213 223 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site RB841 537ec27cee7f1c972311a17a791f6ef9 835 PRINTS PR00723 Subtilisin serine protease family (S8) signature 209 222 1.2E-13 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related RB841 537ec27cee7f1c972311a17a791f6ef9 835 PRINTS PR00723 Subtilisin serine protease family (S8) signature 394 410 1.2E-13 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related RB841 537ec27cee7f1c972311a17a791f6ef9 835 PRINTS PR00723 Subtilisin serine protease family (S8) signature 162 181 1.2E-13 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related RB841 537ec27cee7f1c972311a17a791f6ef9 835 SUPERFAMILY SSF52743 159 443 2.09E-54 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB841 537ec27cee7f1c972311a17a791f6ef9 835 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 167 178 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site RB841 537ec27cee7f1c972311a17a791f6ef9 835 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 395 405 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site RB841 537ec27cee7f1c972311a17a791f6ef9 835 Gene3D G3DSA:3.40.50.200 159 455 1.2E-53 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB841 537ec27cee7f1c972311a17a791f6ef9 835 Pfam PF00082 Subtilase family 162 436 3.6E-36 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 Pfam PF12833 Helix-turn-helix domain 202 280 5.1E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 Gene3D G3DSA:2.60.120.10 41 104 6.2E-6 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 SUPERFAMILY SSF46689 185 230 6.81E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 SUPERFAMILY SSF46689 233 283 3.18E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 Gene3D G3DSA:1.10.10.60 175 232 3.2E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 Gene3D G3DSA:1.10.10.60 233 283 1.6E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 275 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 SUPERFAMILY SSF51215 20 153 2.75E-7 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB5308 abb240a4bfef6f23a0f0f6e60af04657 285 SMART SM00342 196 279 2.1E-26 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 386 395 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 Gene3D G3DSA:3.40.50.300 128 395 1.9E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4906 a82329314815c51c5dc008cc9c4c50e0 508 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 60 125 4.8E-13 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 SUPERFAMILY SSF47917 400 504 2.15E-40 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 SUPERFAMILY SSF52540 128 398 1.26E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4906 a82329314815c51c5dc008cc9c4c50e0 508 Hamap MF_01347 ATP synthase subunit beta [atpB]. 55 508 45.887 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 TIGRFAM TIGR03305 alt_F1F0_F1_bet: alternate F1F0 ATPase, F1 subunit beta 58 505 4.0E-264 T 11-11-2016 IPR017691 ATP synthase subunit beta, bacterial and archaeal GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 57 504 9.6E-181 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 Gene3D G3DSA:2.40.10.170 53 126 9.3E-18 T 11-11-2016 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 182 395 1.9E-59 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 Gene3D G3DSA:1.10.1140.10 400 503 7.9E-39 T 11-11-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 SUPERFAMILY SSF50615 54 125 1.2E-16 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4906 a82329314815c51c5dc008cc9c4c50e0 508 SMART SM00382 194 355 0.0012 T 11-11-2016 IPR003593 AAA+ ATPase domain RB12279 ca335a7f7e81bf3bc6b17421976860e4 337 Gene3D G3DSA:2.30.30.60 178 226 5.6E-11 T 11-11-2016 RB12279 ca335a7f7e81bf3bc6b17421976860e4 337 SUPERFAMILY SSF50182 162 226 2.39E-12 T 11-11-2016 IPR010920 LSM domain RB12279 ca335a7f7e81bf3bc6b17421976860e4 337 Pfam PF00924 Mechanosensitive ion channel 120 313 5.3E-28 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RB8062 78bb9125e9f8b6d0fd04409136f16660 700 SMART SM00491 537 670 1.5E-29 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RB8062 78bb9125e9f8b6d0fd04409136f16660 700 Pfam PF06733 DEAD_2 213 286 8.8E-6 T 11-11-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 RB8062 78bb9125e9f8b6d0fd04409136f16660 700 Gene3D G3DSA:3.40.50.300 105 159 4.4E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8062 78bb9125e9f8b6d0fd04409136f16660 700 Gene3D G3DSA:3.40.50.300 22 68 4.4E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8062 78bb9125e9f8b6d0fd04409136f16660 700 Gene3D G3DSA:3.40.50.300 231 296 4.4E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8062 78bb9125e9f8b6d0fd04409136f16660 700 Pfam PF13307 Helicase C-terminal domain 522 683 1.3E-33 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RB8062 78bb9125e9f8b6d0fd04409136f16660 700 SMART SM00488 24 302 3.3E-4 T 11-11-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 RB8062 78bb9125e9f8b6d0fd04409136f16660 700 SUPERFAMILY SSF52540 216 280 1.12E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8062 78bb9125e9f8b6d0fd04409136f16660 700 SUPERFAMILY SSF52540 489 664 1.12E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8062 78bb9125e9f8b6d0fd04409136f16660 700 SUPERFAMILY SSF52540 104 126 1.12E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8062 78bb9125e9f8b6d0fd04409136f16660 700 SUPERFAMILY SSF52540 447 461 1.12E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8062 78bb9125e9f8b6d0fd04409136f16660 700 SUPERFAMILY SSF52540 39 71 1.12E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8062 78bb9125e9f8b6d0fd04409136f16660 700 SMART SM00487 22 349 3.9E-7 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB8062 78bb9125e9f8b6d0fd04409136f16660 700 Gene3D G3DSA:3.40.50.300 557 665 2.4E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8613 f8b4767535fcadcd55544baf05dd54d3 292 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 19 291 2.4E-88 T 11-11-2016 RB8613 f8b4767535fcadcd55544baf05dd54d3 292 Gene3D G3DSA:3.40.50.880 20 290 1.2E-24 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8613 f8b4767535fcadcd55544baf05dd54d3 292 SMART SM01211 19 291 6.5E-110 T 11-11-2016 RB8613 f8b4767535fcadcd55544baf05dd54d3 292 SUPERFAMILY SSF52317 16 291 4.59E-73 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB10232 c7fd3f5bd3ef94bd2bc6c0894484bfe4 527 SUPERFAMILY SSF53649 56 503 2.86E-108 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10232 c7fd3f5bd3ef94bd2bc6c0894484bfe4 527 Gene3D G3DSA:3.30.1120.10 445 515 6.4E-12 T 11-11-2016 RB10232 c7fd3f5bd3ef94bd2bc6c0894484bfe4 527 Gene3D G3DSA:3.40.720.10 55 424 1.1E-91 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB10232 c7fd3f5bd3ef94bd2bc6c0894484bfe4 527 Pfam PF00884 Sulfatase 58 405 6.5E-60 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10232 c7fd3f5bd3ef94bd2bc6c0894484bfe4 527 ProSitePatterns PS00523 Sulfatases signature 1. 117 129 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB10232 c7fd3f5bd3ef94bd2bc6c0894484bfe4 527 ProSitePatterns PS00149 Sulfatases signature 2. 159 169 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB12549 c164c38962e05f131e7c4a12e1880d60 451 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 211 222 - T 11-11-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB12549 c164c38962e05f131e7c4a12e1880d60 451 Pfam PF01170 Putative RNA methylase family UPF0020 178 330 8.0E-44 T 11-11-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB12549 c164c38962e05f131e7c4a12e1880d60 451 Pfam PF02926 THUMP domain 48 169 2.0E-6 T 11-11-2016 IPR004114 THUMP domain GO:0003723 RB12549 c164c38962e05f131e7c4a12e1880d60 451 SMART SM00981 73 170 3.3E-6 T 11-11-2016 IPR004114 THUMP domain GO:0003723 RB12549 c164c38962e05f131e7c4a12e1880d60 451 SUPERFAMILY SSF53335 270 405 5.2E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12549 c164c38962e05f131e7c4a12e1880d60 451 SUPERFAMILY SSF53335 160 233 5.2E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12549 c164c38962e05f131e7c4a12e1880d60 451 Gene3D G3DSA:3.40.50.150 267 404 2.0E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12549 c164c38962e05f131e7c4a12e1880d60 451 Gene3D G3DSA:3.40.50.150 159 230 2.0E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10030 1095a702d9d04bc789fc6433240aa8cb 538 SUPERFAMILY SSF56059 74 267 1.42E-58 T 11-11-2016 RB10030 1095a702d9d04bc789fc6433240aa8cb 538 SUPERFAMILY SSF56059 374 521 1.42E-58 T 11-11-2016 RB10030 1095a702d9d04bc789fc6433240aa8cb 538 Pfam PF14403 Circularly permuted ATP-grasp type 2 129 506 2.1E-167 T 11-11-2016 IPR025841 Circularly permuted ATP-grasp type 2 RB10030 1095a702d9d04bc789fc6433240aa8cb 538 PIRSF PIRSF005522 51 533 8.8E-238 T 11-11-2016 IPR016450 Uncharacterised conserved protein UCP005522 RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 SUPERFAMILY SSF52402 241 390 5.42E-61 T 11-11-2016 RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 SUPERFAMILY SSF52402 473 603 5.42E-61 T 11-11-2016 RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 SUPERFAMILY SSF56235 1 229 6.43E-58 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 Pfam PF13537 Glutamine amidotransferase domain 51 169 4.6E-35 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 Gene3D G3DSA:3.60.20.10 1 227 2.1E-62 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 Gene3D G3DSA:3.40.50.620 228 386 1.1E-64 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 Gene3D G3DSA:3.40.50.620 468 602 1.1E-64 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 554 5.8E-118 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 Pfam PF00733 Asparagine synthase 248 602 6.5E-85 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RB13303 6fef46779fab2b79c92ca4d06cb5717c 639 PIRSF PIRSF001589 1 634 1.4E-129 T 11-11-2016 RB10465 efac614e6468dfad6f5810105b7f7876 429 SUPERFAMILY SSF53448 6 281 1.97E-76 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB10465 efac614e6468dfad6f5810105b7f7876 429 SUPERFAMILY SSF53448 309 325 1.97E-76 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB10465 efac614e6468dfad6f5810105b7f7876 429 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 101 109 - T 11-11-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB10465 efac614e6468dfad6f5810105b7f7876 429 Gene3D G3DSA:3.90.550.10 9 350 7.6E-76 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB10465 efac614e6468dfad6f5810105b7f7876 429 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 351 8.9E-4 T 11-11-2016 IPR001451 Hexapeptide repeat RB10465 efac614e6468dfad6f5810105b7f7876 429 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 14 33 - T 11-11-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB10465 efac614e6468dfad6f5810105b7f7876 429 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 8 394 8.1E-146 T 11-11-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB10465 efac614e6468dfad6f5810105b7f7876 429 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 214 224 - T 11-11-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 RB10465 efac614e6468dfad6f5810105b7f7876 429 Pfam PF00483 Nucleotidyl transferase 10 278 1.5E-62 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RB10465 efac614e6468dfad6f5810105b7f7876 429 SUPERFAMILY SSF51161 297 426 1.34E-22 T 11-11-2016 IPR011004 Trimeric LpxA-like RB5050 e59dae8cd105b16c93edee8c750ad1b9 537 Pfam PF13522 Glutamine amidotransferase domain 87 233 3.9E-19 T 11-11-2016 RB5050 e59dae8cd105b16c93edee8c750ad1b9 537 PIRSF PIRSF000485 4 518 2.2E-166 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RB5050 e59dae8cd105b16c93edee8c750ad1b9 537 Gene3D G3DSA:3.40.50.2020 300 479 4.1E-32 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB5050 e59dae8cd105b16c93edee8c750ad1b9 537 SUPERFAMILY SSF53271 277 511 2.98E-49 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB5050 e59dae8cd105b16c93edee8c750ad1b9 537 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 7 503 39.907 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RB5050 e59dae8cd105b16c93edee8c750ad1b9 537 Gene3D G3DSA:3.60.20.10 28 285 2.3E-46 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB5050 e59dae8cd105b16c93edee8c750ad1b9 537 SUPERFAMILY SSF56235 8 284 7.38E-48 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB3446 76b3d05f7e3f874f406775a65a8a7473 511 SUPERFAMILY SSF50891 316 491 1.18E-35 T 11-11-2016 IPR029000 Cyclophilin-like domain RB3446 76b3d05f7e3f874f406775a65a8a7473 511 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 318 475 9.1E-28 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB3446 76b3d05f7e3f874f406775a65a8a7473 511 Gene3D G3DSA:2.40.100.10 311 478 1.5E-33 T 11-11-2016 IPR029000 Cyclophilin-like domain RB3446 76b3d05f7e3f874f406775a65a8a7473 511 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 331 346 1.6E-6 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB3446 76b3d05f7e3f874f406775a65a8a7473 511 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 448 1.6E-6 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB3446 76b3d05f7e3f874f406775a65a8a7473 511 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 357 369 1.6E-6 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB6860 31631d4e53aae3cea8a6631bc41de8b8 459 Gene3D G3DSA:3.30.360.10 206 431 4.9E-32 T 11-11-2016 RB6860 31631d4e53aae3cea8a6631bc41de8b8 459 SUPERFAMILY SSF51735 53 227 3.75E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6860 31631d4e53aae3cea8a6631bc41de8b8 459 SUPERFAMILY SSF55347 199 405 5.4E-26 T 11-11-2016 RB6860 31631d4e53aae3cea8a6631bc41de8b8 459 Gene3D G3DSA:3.40.50.720 64 205 2.6E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6860 31631d4e53aae3cea8a6631bc41de8b8 459 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 69 192 5.8E-18 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB749 cb289763a40e1ed67c6dd2b1d14de4cc 537 Pfam PF13360 PQQ-like domain 67 235 4.3E-15 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB749 cb289763a40e1ed67c6dd2b1d14de4cc 537 Gene3D G3DSA:2.140.10.10 24 449 5.2E-59 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB749 cb289763a40e1ed67c6dd2b1d14de4cc 537 SUPERFAMILY SSF50998 37 450 4.37E-52 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB749 cb289763a40e1ed67c6dd2b1d14de4cc 537 SMART SM00564 156 186 350.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB749 cb289763a40e1ed67c6dd2b1d14de4cc 537 SMART SM00564 84 131 1.3 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB749 cb289763a40e1ed67c6dd2b1d14de4cc 537 SMART SM00564 202 235 0.0073 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Gene3D G3DSA:3.30.420.40 252 292 1.5E-34 T 11-11-2016 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Gene3D G3DSA:3.30.420.40 382 424 1.5E-34 T 11-11-2016 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 69 76 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Gene3D G3DSA:2.60.34.10 453 594 7.9E-64 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 532 548 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 93 105 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 428 448 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 65 78 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 257 267 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 397 413 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 198 218 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 116 124 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 PRINTS PR00301 70kDa heat shock protein signature 451 470 2.0E-77 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 400 414 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Gene3D G3DSA:3.30.30.30 115 165 1.7E-20 T 11-11-2016 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 SUPERFAMILY SSF100934 570 668 1.57E-15 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 SUPERFAMILY SSF100920 447 601 1.83E-53 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 SUPERFAMILY SSF53067 66 244 3.4E-62 T 11-11-2016 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 63 703 35.968 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 65 666 2.5E-277 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Pfam PF00012 Hsp70 protein 66 666 4.0E-246 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Gene3D G3DSA:1.20.1270.10 595 666 3.0E-19 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Gene3D G3DSA:3.90.640.10 293 378 4.8E-31 T 11-11-2016 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Gene3D G3DSA:3.30.420.40 179 251 1.4E-65 T 11-11-2016 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 Gene3D G3DSA:3.30.420.40 66 114 1.4E-65 T 11-11-2016 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 SUPERFAMILY SSF53067 246 445 8.19E-67 T 11-11-2016 RB9105 8f996aef62ecd83e7abae5a1e65c2367 704 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 251 264 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB5753 f2aa2e3c635c1b67ae531915bcf726d1 160 Pfam PF00578 AhpC/TSA family 8 135 4.6E-42 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB5753 f2aa2e3c635c1b67ae531915bcf726d1 160 SUPERFAMILY SSF52833 5 154 2.94E-52 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5753 f2aa2e3c635c1b67ae531915bcf726d1 160 PIRSF PIRSF000239 2 147 7.9E-26 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB5753 f2aa2e3c635c1b67ae531915bcf726d1 160 Gene3D G3DSA:3.40.30.10 3 156 6.6E-53 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4851 f7ca494802894eb9ed58936b927328ea 490 SUPERFAMILY SSF53649 32 451 4.8E-114 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB4851 f7ca494802894eb9ed58936b927328ea 490 Gene3D G3DSA:3.30.1120.10 385 452 3.0E-11 T 11-11-2016 RB4851 f7ca494802894eb9ed58936b927328ea 490 Pfam PF00884 Sulfatase 32 361 1.3E-70 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB4851 f7ca494802894eb9ed58936b927328ea 490 Gene3D G3DSA:3.40.720.10 29 382 4.2E-99 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4851 f7ca494802894eb9ed58936b927328ea 490 ProSitePatterns PS00523 Sulfatases signature 1. 78 90 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB7240 d0a776163cc99ee0234578948e4749eb 1038 SUPERFAMILY SSF48452 61 181 1.69E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7240 d0a776163cc99ee0234578948e4749eb 1038 SUPERFAMILY SSF48452 212 333 1.69E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7240 d0a776163cc99ee0234578948e4749eb 1038 Pfam PF07593 ASPIC and UnbV 959 1024 2.1E-10 T 11-11-2016 IPR011519 ASPIC/UnbV RB7240 d0a776163cc99ee0234578948e4749eb 1038 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 584 647 1.5E-15 T 11-11-2016 RB7240 d0a776163cc99ee0234578948e4749eb 1038 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 783 849 1.5E-8 T 11-11-2016 RB7240 d0a776163cc99ee0234578948e4749eb 1038 Gene3D G3DSA:2.130.10.130 693 936 2.0E-12 T 11-11-2016 RB7240 d0a776163cc99ee0234578948e4749eb 1038 Gene3D G3DSA:2.130.10.130 514 649 7.7E-17 T 11-11-2016 RB7240 d0a776163cc99ee0234578948e4749eb 1038 Gene3D G3DSA:1.25.40.10 60 159 8.3E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7240 d0a776163cc99ee0234578948e4749eb 1038 Gene3D G3DSA:1.25.40.10 208 401 2.0E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7240 d0a776163cc99ee0234578948e4749eb 1038 SUPERFAMILY SSF69318 518 937 1.83E-47 T 11-11-2016 RB3615 ee7576c76335f065cb062f1a31d79443 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 145 1.1E-18 T 11-11-2016 IPR000014 PAS domain RB3615 ee7576c76335f065cb062f1a31d79443 410 Gene3D G3DSA:3.30.565.10 230 402 1.7E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3615 ee7576c76335f065cb062f1a31d79443 410 Gene3D G3DSA:3.30.450.20 22 136 7.7E-23 T 11-11-2016 RB3615 ee7576c76335f065cb062f1a31d79443 410 SMART SM00388 178 244 8.4E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3615 ee7576c76335f065cb062f1a31d79443 410 Gene3D G3DSA:1.10.287.130 174 229 5.0E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3615 ee7576c76335f065cb062f1a31d79443 410 SMART SM00086 96 138 1.2E-7 T 11-11-2016 IPR001610 PAC motif RB3615 ee7576c76335f065cb062f1a31d79443 410 SMART SM00091 22 90 1.4E-4 T 11-11-2016 IPR000014 PAS domain RB3615 ee7576c76335f065cb062f1a31d79443 410 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 240 3.0E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3615 ee7576c76335f065cb062f1a31d79443 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 400 6.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3615 ee7576c76335f065cb062f1a31d79443 410 SUPERFAMILY SSF47384 174 243 4.71E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB3615 ee7576c76335f065cb062f1a31d79443 410 SUPERFAMILY SSF55785 39 147 1.26E-22 T 11-11-2016 IPR000014 PAS domain RB3615 ee7576c76335f065cb062f1a31d79443 410 SMART SM00387 293 403 5.4E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3615 ee7576c76335f065cb062f1a31d79443 410 SUPERFAMILY SSF55874 245 401 3.14E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3615 ee7576c76335f065cb062f1a31d79443 410 Pfam PF08447 PAS fold 45 127 5.8E-11 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB3615 ee7576c76335f065cb062f1a31d79443 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 3.4E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3615 ee7576c76335f065cb062f1a31d79443 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 344 3.4E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3615 ee7576c76335f065cb062f1a31d79443 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 3.4E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB3615 ee7576c76335f065cb062f1a31d79443 410 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 358 3.4E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10401 399b8a06630f3a77be84b7d7d2b78a5e 785 SUPERFAMILY SSF52540 569 747 9.78E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10401 399b8a06630f3a77be84b7d7d2b78a5e 785 Pfam PF02706 Chain length determinant protein 29 173 1.5E-15 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RB10401 399b8a06630f3a77be84b7d7d2b78a5e 785 Pfam PF13614 AAA domain 572 690 5.1E-12 T 11-11-2016 IPR025669 AAA domain RB10401 399b8a06630f3a77be84b7d7d2b78a5e 785 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 563 755 4.9E-44 T 11-11-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 RB10401 399b8a06630f3a77be84b7d7d2b78a5e 785 Gene3D G3DSA:3.40.50.300 569 744 1.9E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12431 89fd9489e67385a105bf01a2a0e9c3aa 524 Pfam PF00884 Sulfatase 48 395 6.2E-40 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB12431 89fd9489e67385a105bf01a2a0e9c3aa 524 Gene3D G3DSA:3.40.720.10 45 415 1.7E-76 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12431 89fd9489e67385a105bf01a2a0e9c3aa 524 SUPERFAMILY SSF53649 46 509 1.57E-87 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB12431 89fd9489e67385a105bf01a2a0e9c3aa 524 Gene3D G3DSA:3.30.1120.10 426 517 8.8E-16 T 11-11-2016 RB12431 89fd9489e67385a105bf01a2a0e9c3aa 524 ProSitePatterns PS00523 Sulfatases signature 1. 99 111 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB10517 72b3d6454acf8c497926faa333494bee 314 Gene3D G3DSA:3.40.50.300 22 187 1.2E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10517 72b3d6454acf8c497926faa333494bee 314 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 170 1.1E-64 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB10517 72b3d6454acf8c497926faa333494bee 314 Gene3D G3DSA:1.10.8.300 202 287 2.0E-26 T 11-11-2016 RB10517 72b3d6454acf8c497926faa333494bee 314 SUPERFAMILY SSF52540 8 284 1.14E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10517 72b3d6454acf8c497926faa333494bee 314 PIRSF PIRSF002849 1 314 1.5E-128 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB4605 1073b475762e8eb785cffc0d018d18f8 327 PIRSF PIRSF001365 1 304 6.8E-72 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB4605 1073b475762e8eb785cffc0d018d18f8 327 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 6.8E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB4605 1073b475762e8eb785cffc0d018d18f8 327 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 6.8E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB4605 1073b475762e8eb785cffc0d018d18f8 327 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 6.8E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB4605 1073b475762e8eb785cffc0d018d18f8 327 SMART SM01130 4 293 2.9E-91 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB4605 1073b475762e8eb785cffc0d018d18f8 327 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 11-11-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB4605 1073b475762e8eb785cffc0d018d18f8 327 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 11-11-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB4605 1073b475762e8eb785cffc0d018d18f8 327 Pfam PF00701 Dihydrodipicolinate synthetase family 5 282 3.0E-58 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB4605 1073b475762e8eb785cffc0d018d18f8 327 Gene3D G3DSA:3.20.20.70 2 295 1.7E-83 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB4605 1073b475762e8eb785cffc0d018d18f8 327 SUPERFAMILY SSF51569 3 285 6.18E-79 T 11-11-2016 RB7289 eea083a9af800b41ca1923b621e9d888 299 SUPERFAMILY SSF52540 15 259 6.17E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7289 eea083a9af800b41ca1923b621e9d888 299 Pfam PF00005 ABC transporter 30 202 1.0E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB7289 eea083a9af800b41ca1923b621e9d888 299 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7289 eea083a9af800b41ca1923b621e9d888 299 SMART SM00382 39 260 5.0E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7289 eea083a9af800b41ca1923b621e9d888 299 Gene3D G3DSA:3.40.50.300 112 258 1.4E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7289 eea083a9af800b41ca1923b621e9d888 299 Gene3D G3DSA:3.40.50.300 13 75 1.4E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4376 724470f38d49468b6de43498609ba082 493 ProSitePatterns PS00438 Catalase proximal active site signature. 47 63 - T 11-11-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 PRINTS PR00067 Catalase signature 108 125 3.9E-66 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 PRINTS PR00067 Catalase signature 24 47 3.9E-66 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 PRINTS PR00067 Catalase signature 87 105 3.9E-66 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 PRINTS PR00067 Catalase signature 292 319 3.9E-66 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 PRINTS PR00067 Catalase signature 324 350 3.9E-66 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 PRINTS PR00067 Catalase signature 127 145 3.9E-66 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 Pfam PF06628 Catalase-related immune-responsive 421 482 2.9E-16 T 11-11-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 Pfam PF00199 Catalase 11 392 4.3E-189 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 SUPERFAMILY SSF56634 5 487 1.03E-205 T 11-11-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 Gene3D G3DSA:2.40.180.10 3 361 1.2E-178 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 SMART SM01060 11 395 1.1E-275 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB4376 724470f38d49468b6de43498609ba082 493 PIRSF PIRSF038928 1 488 3.3E-210 T 11-11-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 Gene3D G3DSA:3.40.50.970 397 617 1.0E-67 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 SUPERFAMILY SSF52467 229 394 6.14E-60 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 Gene3D G3DSA:3.40.50.1220 227 396 2.0E-64 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 42 210 2.7E-53 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 42 617 1.2E-208 T 11-11-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 SUPERFAMILY SSF52518 40 222 6.09E-60 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 426 595 1.9E-46 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 Gene3D G3DSA:3.40.50.970 41 218 3.6E-69 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 234 369 3.0E-44 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 SUPERFAMILY SSF52518 402 617 2.36E-60 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB12905 083f78dc2bf2ce1a7357d55a9897e71f 619 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 463 482 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RB11231 96144dd16c2b8da1ee1e0173b92599e2 390 SUPERFAMILY SSF75169 261 387 5.89E-17 T 11-11-2016 IPR027396 DsrEFH-like RB11231 96144dd16c2b8da1ee1e0173b92599e2 390 Gene3D G3DSA:3.40.1260.10 269 386 1.1E-12 T 11-11-2016 IPR027396 DsrEFH-like RB11231 96144dd16c2b8da1ee1e0173b92599e2 390 Pfam PF02635 DsrE/DsrF-like family 265 386 7.3E-15 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 SUPERFAMILY SSF53474 645 770 2.81E-20 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 11-11-2016 IPR020845 AMP-binding, conserved site RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Gene3D G3DSA:3.40.50.980 10 174 1.1E-45 T 11-11-2016 RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Gene3D G3DSA:3.40.50.1820 653 770 2.1E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 SUPERFAMILY SSF47336 548 620 1.1E-19 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Pfam PF00501 AMP-binding enzyme 14 430 6.4E-93 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Pfam PF00550 Phosphopantetheine attachment site 556 620 3.9E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 ProSitePatterns PS00012 Phosphopantetheine attachment site. 579 594 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 SUPERFAMILY SSF56801 10 568 4.97E-145 T 11-11-2016 RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 SMART SM00823 Phosphopantetheine attachment site 555 624 3.2E-5 T 11-11-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Gene3D G3DSA:2.30.38.10 343 420 7.7E-25 T 11-11-2016 RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Gene3D G3DSA:3.40.50.980 175 342 8.6E-37 T 11-11-2016 RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 35 455 2.7E-119 T 11-11-2016 IPR010071 Amino acid adenylation domain RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Pfam PF12146 Serine aminopeptidase, S33 676 765 5.2E-8 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Gene3D G3DSA:1.10.1200.10 560 626 5.1E-27 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Gene3D G3DSA:3.30.300.30 426 559 1.6E-33 T 11-11-2016 RB7276 2adec6a238a55acb25ea2ef7df9a43c7 916 Pfam PF13193 AMP-binding enzyme C-terminal domain 439 527 2.5E-11 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain RB165 cd945d7eddeea0cb81bb2f36fff2d726 389 Gene3D G3DSA:3.30.420.10 224 380 8.8E-33 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB165 cd945d7eddeea0cb81bb2f36fff2d726 389 SUPERFAMILY SSF46689 13 95 1.0E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB165 cd945d7eddeea0cb81bb2f36fff2d726 389 Pfam PF00665 Integrase core domain 229 343 2.6E-29 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB165 cd945d7eddeea0cb81bb2f36fff2d726 389 Gene3D G3DSA:1.10.10.60 17 90 8.1E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB165 cd945d7eddeea0cb81bb2f36fff2d726 389 Pfam PF13276 HTH-like domain 155 201 8.2E-11 T 11-11-2016 IPR025948 HTH-like domain RB165 cd945d7eddeea0cb81bb2f36fff2d726 389 Pfam PF01527 Transposase 13 85 2.1E-8 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB165 cd945d7eddeea0cb81bb2f36fff2d726 389 SUPERFAMILY SSF53098 225 381 1.14E-34 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB2750 f5763d379c0d045595abada74644be06 222 Pfam PF02441 Flavoprotein 10 162 1.0E-24 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RB2750 f5763d379c0d045595abada74644be06 222 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 9 221 33.007 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RB2750 f5763d379c0d045595abada74644be06 222 Gene3D G3DSA:3.40.50.1950 9 221 1.7E-64 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RB2750 f5763d379c0d045595abada74644be06 222 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 96 219 2.0E-43 T 11-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RB2750 f5763d379c0d045595abada74644be06 222 SUPERFAMILY SSF52507 96 221 1.24E-49 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RB2750 f5763d379c0d045595abada74644be06 222 SUPERFAMILY SSF52507 9 67 1.24E-49 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RB11151 bd109f194adc5ec5610810ac15f74158 336 SMART SM00829 14 333 1.3E-7 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB11151 bd109f194adc5ec5610810ac15f74158 336 Gene3D G3DSA:3.90.180.10 1 170 1.9E-58 T 11-11-2016 IPR011032 GroES-like RB11151 bd109f194adc5ec5610810ac15f74158 336 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 170 197 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RB11151 bd109f194adc5ec5610810ac15f74158 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RB11151 bd109f194adc5ec5610810ac15f74158 336 SUPERFAMILY SSF51735 141 303 1.66E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11151 bd109f194adc5ec5610810ac15f74158 336 Pfam PF00107 Zinc-binding dehydrogenase 177 298 3.4E-16 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB11151 bd109f194adc5ec5610810ac15f74158 336 SUPERFAMILY SSF50129 6 160 1.98E-45 T 11-11-2016 IPR011032 GroES-like RB11151 bd109f194adc5ec5610810ac15f74158 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 136 4.0E-28 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB11151 bd109f194adc5ec5610810ac15f74158 336 Gene3D G3DSA:3.40.50.720 171 271 6.1E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7967 d155c64718913e1dd63c41d04b1f11cd 547 SUPERFAMILY SSF56322 58 538 6.87E-158 T 11-11-2016 IPR005801 ADC synthase GO:0009058 RB7967 d155c64718913e1dd63c41d04b1f11cd 547 PRINTS PR00095 Anthranilate synthase component I signature 485 499 1.8E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB7967 d155c64718913e1dd63c41d04b1f11cd 547 PRINTS PR00095 Anthranilate synthase component I signature 376 389 1.8E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB7967 d155c64718913e1dd63c41d04b1f11cd 547 PRINTS PR00095 Anthranilate synthase component I signature 390 403 1.8E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB7967 d155c64718913e1dd63c41d04b1f11cd 547 PRINTS PR00095 Anthranilate synthase component I signature 470 484 1.8E-23 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB7967 d155c64718913e1dd63c41d04b1f11cd 547 Gene3D G3DSA:3.60.120.10 58 537 3.6E-172 T 11-11-2016 IPR005801 ADC synthase GO:0009058 RB7967 d155c64718913e1dd63c41d04b1f11cd 547 Pfam PF00425 chorismate binding enzyme 275 528 3.1E-99 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RB7967 d155c64718913e1dd63c41d04b1f11cd 547 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 68 536 3.5E-170 T 11-11-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB7967 d155c64718913e1dd63c41d04b1f11cd 547 Pfam PF04715 Anthranilate synthase component I, N terminal region 69 209 2.8E-33 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Pfam PF03144 Elongation factor Tu domain 2 318 384 7.8E-12 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 SUPERFAMILY SSF54980 596 689 1.4E-27 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Gene3D G3DSA:2.40.30.10 300 398 3.5E-30 T 11-11-2016 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Pfam PF03764 Elongation factor G, domain IV 472 592 5.0E-39 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Pfam PF00009 Elongation factor Tu GTP binding domain 5 277 6.5E-63 T 11-11-2016 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Pfam PF00679 Elongation factor G C-terminus 596 681 2.9E-29 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 SUPERFAMILY SSF54980 395 473 2.45E-24 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 SUPERFAMILY SSF50447 260 395 4.86E-28 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 SMART SM00889 473 593 5.0E-57 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Gene3D G3DSA:3.30.230.10 477 592 5.4E-41 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 178 2.4E-27 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 SUPERFAMILY SSF52540 2 277 2.19E-97 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Gene3D G3DSA:3.30.70.870 399 473 1.4E-32 T 11-11-2016 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Pfam PF14492 Elongation Factor G, domain II 397 470 3.1E-32 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 SMART SM00838 595 682 4.6E-43 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 687 2.3E-292 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Gene3D G3DSA:3.40.50.300 2 281 6.0E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 PRINTS PR00315 GTP-binding elongation factor signature 76 86 1.2E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 PRINTS PR00315 GTP-binding elongation factor signature 92 103 1.2E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 PRINTS PR00315 GTP-binding elongation factor signature 56 64 1.2E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 PRINTS PR00315 GTP-binding elongation factor signature 128 137 1.2E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 PRINTS PR00315 GTP-binding elongation factor signature 8 21 1.2E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Hamap MF_00054_B Elongation factor G [fusA]. 2 686 105.498 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 Gene3D G3DSA:3.30.70.240 593 687 5.6E-30 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB5434 80584249b6b83f2e7dc646e1fcfea8b1 695 SUPERFAMILY SSF54211 472 594 1.11E-37 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB1125 92ac3c493fc8f5f98d63fae10ee66335 703 SUPERFAMILY SSF52540 516 700 1.01E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1125 92ac3c493fc8f5f98d63fae10ee66335 703 Pfam PF00005 ABC transporter 516 654 7.2E-11 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB1125 92ac3c493fc8f5f98d63fae10ee66335 703 Gene3D G3DSA:3.40.50.300 516 701 1.9E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1125 92ac3c493fc8f5f98d63fae10ee66335 703 Gene3D G3DSA:1.20.1560.10 169 479 4.2E-33 T 11-11-2016 RB1125 92ac3c493fc8f5f98d63fae10ee66335 703 Pfam PF00664 ABC transporter transmembrane region 183 452 6.6E-10 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB1125 92ac3c493fc8f5f98d63fae10ee66335 703 SUPERFAMILY SSF90123 167 481 6.67E-39 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB1235 e7c1867acea09fd32a8a18363b27476e 460 Gene3D G3DSA:3.40.50.720 34 177 1.5E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1235 e7c1867acea09fd32a8a18363b27476e 460 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 24 6.0E-5 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RB1235 e7c1867acea09fd32a8a18363b27476e 460 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 39 161 2.8E-20 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB1235 e7c1867acea09fd32a8a18363b27476e 460 SUPERFAMILY SSF51735 29 187 8.07E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1235 e7c1867acea09fd32a8a18363b27476e 460 SUPERFAMILY SSF55347 170 357 1.08E-13 T 11-11-2016 RB1235 e7c1867acea09fd32a8a18363b27476e 460 Gene3D G3DSA:3.30.360.10 178 428 1.4E-16 T 11-11-2016 RB8343 52887a212341c81402dd8ae6eb809a09 485 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 6.2E-13 T 11-11-2016 IPR000362 Fumarate lyase family RB8343 52887a212341c81402dd8ae6eb809a09 485 PRINTS PR00149 Fumarate lyase superfamily signature 154 172 6.2E-13 T 11-11-2016 IPR000362 Fumarate lyase family RB8343 52887a212341c81402dd8ae6eb809a09 485 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 6.2E-13 T 11-11-2016 IPR000362 Fumarate lyase family RB8343 52887a212341c81402dd8ae6eb809a09 485 Pfam PF00206 Lyase 91 308 2.2E-20 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal RB8343 52887a212341c81402dd8ae6eb809a09 485 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RB8343 52887a212341c81402dd8ae6eb809a09 485 Gene3D G3DSA:1.20.200.10 113 459 2.0E-120 T 11-11-2016 RB8343 52887a212341c81402dd8ae6eb809a09 485 SUPERFAMILY SSF48557 18 463 1.88E-103 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 RB8343 52887a212341c81402dd8ae6eb809a09 485 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 20 461 1.5E-122 T 11-11-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB8343 52887a212341c81402dd8ae6eb809a09 485 Pfam PF10397 Adenylosuccinate lyase C-terminus 381 461 3.1E-16 T 11-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB8343 52887a212341c81402dd8ae6eb809a09 485 Gene3D G3DSA:1.10.275.10 21 112 3.8E-28 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal RB8343 52887a212341c81402dd8ae6eb809a09 485 SMART SM00998 380 462 3.1E-23 T 11-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RB3153 9fe21639a6cc10f88a72bc0c2f60c84e 76 Pfam PF07623 Protein of unknown function (DUF1584) 2 28 3.7E-12 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB6796 6e741416238d26bf6fa300f387982484 675 Pfam PF07583 Protein of unknown function (DUF1549) 102 284 1.4E-42 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB6796 6e741416238d26bf6fa300f387982484 675 Pfam PF07587 Protein of unknown function (DUF1553) 375 643 4.4E-49 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB5948 0c442cd274a29829ef9d6f932a2bed50 346 Gene3D G3DSA:3.90.180.10 1 168 1.8E-56 T 11-11-2016 IPR011032 GroES-like RB5948 0c442cd274a29829ef9d6f932a2bed50 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RB5948 0c442cd274a29829ef9d6f932a2bed50 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 135 1.7E-32 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB5948 0c442cd274a29829ef9d6f932a2bed50 346 SMART SM00829 7 307 0.0014 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB5948 0c442cd274a29829ef9d6f932a2bed50 346 SUPERFAMILY SSF50129 1 175 1.0E-53 T 11-11-2016 IPR011032 GroES-like RB5948 0c442cd274a29829ef9d6f932a2bed50 346 Pfam PF00107 Zinc-binding dehydrogenase 177 302 9.9E-30 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB5948 0c442cd274a29829ef9d6f932a2bed50 346 Gene3D G3DSA:3.40.50.720 169 288 1.8E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5948 0c442cd274a29829ef9d6f932a2bed50 346 SUPERFAMILY SSF51735 140 307 7.4E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1800 7a2ab967e8fef4d3617f27d95f30a7e9 293 SUPERFAMILY SSF53300 72 226 2.43E-18 T 11-11-2016 IPR002035 von Willebrand factor, type A RB1800 7a2ab967e8fef4d3617f27d95f30a7e9 293 Pfam PF01882 Protein of unknown function DUF58 37 121 1.2E-25 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB10519 cde5b3d5088306480cc31e4f11312c61 455 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 157 371 5.1E-74 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RB10519 cde5b3d5088306480cc31e4f11312c61 455 SUPERFAMILY SSF47781 86 141 1.16E-9 T 11-11-2016 IPR010994 RuvA domain 2-like RB10519 cde5b3d5088306480cc31e4f11312c61 455 SUPERFAMILY SSF102405 168 372 1.28E-39 T 11-11-2016 RB10519 cde5b3d5088306480cc31e4f11312c61 455 Pfam PF02481 DNA recombination-mediator protein A 157 363 1.8E-75 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RB10519 cde5b3d5088306480cc31e4f11312c61 455 Gene3D G3DSA:1.10.150.20 98 141 4.5E-10 T 11-11-2016 RB10519 cde5b3d5088306480cc31e4f11312c61 455 Gene3D G3DSA:3.40.50.450 199 371 5.1E-14 T 11-11-2016 RB10519 cde5b3d5088306480cc31e4f11312c61 455 Pfam PF14520 Helix-hairpin-helix domain 98 139 7.0E-8 T 11-11-2016 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 TIGRFAM TIGR01027 proB: glutamate 5-kinase 22 383 1.4E-110 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 PIRSF PIRSF000729 16 386 9.2E-149 T 11-11-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 Gene3D G3DSA:3.40.1160.10 21 274 3.3E-43 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 Hamap MF_00456 Glutamate 5-kinase [proB]. 21 275 30.782 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 Pfam PF00696 Amino acid kinase family 21 251 3.3E-26 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 SUPERFAMILY SSF53633 21 274 5.89E-52 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 ProSitePatterns PS00902 Glutamate 5-kinase signature. 224 241 - T 11-11-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 PRINTS PR00474 Glutamate 5-kinase family signature 132 153 4.6E-36 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 PRINTS PR00474 Glutamate 5-kinase family signature 226 246 4.6E-36 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 PRINTS PR00474 Glutamate 5-kinase family signature 92 120 4.6E-36 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 PRINTS PR00474 Glutamate 5-kinase family signature 166 193 4.6E-36 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 PRINTS PR00474 Glutamate 5-kinase family signature 58 72 4.6E-36 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 SUPERFAMILY SSF88697 294 384 2.32E-22 T 11-11-2016 IPR015947 PUA-like domain RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 Pfam PF01472 PUA domain 294 367 5.1E-19 T 11-11-2016 IPR002478 PUA domain GO:0003723 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 SMART SM00359 294 377 1.8E-9 T 11-11-2016 IPR002478 PUA domain GO:0003723 RB12013 f698367b63600ca3a35c6ef77c5b6cb4 389 Gene3D G3DSA:2.30.130.10 292 383 1.7E-23 T 11-11-2016 IPR015947 PUA-like domain RB2970 76d7f15d8d7e86cd871f2dd0ec3f54c1 261 SUPERFAMILY SSF53335 64 245 1.07E-35 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2970 76d7f15d8d7e86cd871f2dd0ec3f54c1 261 Gene3D G3DSA:3.40.50.150 64 214 1.1E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2970 76d7f15d8d7e86cd871f2dd0ec3f54c1 261 Pfam PF08241 Methyltransferase domain 101 195 9.4E-23 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RB5256 d00bf00f15a18a3c7563014c918f56d3 528 SUPERFAMILY SSF51445 225 518 1.92E-70 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB5256 d00bf00f15a18a3c7563014c918f56d3 528 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 238 503 1.1E-50 T 11-11-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 RB5256 d00bf00f15a18a3c7563014c918f56d3 528 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 342 351 - T 11-11-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 RB5256 d00bf00f15a18a3c7563014c918f56d3 528 Gene3D G3DSA:3.20.20.80 199 518 2.0E-74 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB252 ba6d394ae7379870dfa2dde1c6b191c1 163 Pfam PF03692 Putative zinc- or iron-chelating domain 30 117 7.8E-9 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein RB7146 c6759ca2f2434d7e81e65bcfa1ec1127 410 SUPERFAMILY SSF53756 16 374 6.06E-77 T 11-11-2016 RB7146 c6759ca2f2434d7e81e65bcfa1ec1127 410 Pfam PF00534 Glycosyl transferases group 1 190 354 1.9E-37 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB7146 c6759ca2f2434d7e81e65bcfa1ec1127 410 Pfam PF13439 Glycosyltransferase Family 4 23 178 1.0E-15 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB7146 c6759ca2f2434d7e81e65bcfa1ec1127 410 Gene3D G3DSA:3.40.50.2000 164 354 7.5E-30 T 11-11-2016 RB11736 2b892011129d7c52d9fcc32809066f89 429 SUPERFAMILY SSF54523 25 179 5.1E-26 T 11-11-2016 RB11736 2b892011129d7c52d9fcc32809066f89 429 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 23 43 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11736 2b892011129d7c52d9fcc32809066f89 429 Gene3D G3DSA:3.30.700.10 25 92 1.3E-7 T 11-11-2016 RB11736 2b892011129d7c52d9fcc32809066f89 429 Pfam PF07596 Protein of unknown function (DUF1559) 49 383 5.1E-67 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB11736 2b892011129d7c52d9fcc32809066f89 429 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 23 44 7.9E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11736 2b892011129d7c52d9fcc32809066f89 429 Pfam PF13633 Prokaryotic N-terminal methylation site 23 48 2.0E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6486 2253b923d6cff542e030908b4de4e369 455 Gene3D G3DSA:2.140.10.10 28 134 1.4E-63 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB6486 2253b923d6cff542e030908b4de4e369 455 Gene3D G3DSA:2.140.10.10 174 454 1.4E-63 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB6486 2253b923d6cff542e030908b4de4e369 455 SMART SM00564 171 202 110.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6486 2253b923d6cff542e030908b4de4e369 455 SMART SM00564 92 123 18.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6486 2253b923d6cff542e030908b4de4e369 455 SMART SM00564 305 336 170.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6486 2253b923d6cff542e030908b4de4e369 455 SMART SM00564 393 424 0.18 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6486 2253b923d6cff542e030908b4de4e369 455 SMART SM00564 352 384 0.32 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6486 2253b923d6cff542e030908b4de4e369 455 SMART SM00564 224 255 36.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB6486 2253b923d6cff542e030908b4de4e369 455 Pfam PF13360 PQQ-like domain 174 303 9.7E-11 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB6486 2253b923d6cff542e030908b4de4e369 455 Pfam PF13360 PQQ-like domain 80 126 2.9E-4 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB6486 2253b923d6cff542e030908b4de4e369 455 Pfam PF13360 PQQ-like domain 348 450 5.3E-14 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB6486 2253b923d6cff542e030908b4de4e369 455 SUPERFAMILY SSF50998 55 124 5.57E-24 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB6486 2253b923d6cff542e030908b4de4e369 455 SUPERFAMILY SSF50998 161 289 5.57E-24 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB6486 2253b923d6cff542e030908b4de4e369 455 SUPERFAMILY SSF50998 336 452 6.67E-20 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB3648 f27ac49c281413822304864850c62041 466 SUPERFAMILY SSF51735 50 208 2.15E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3648 f27ac49c281413822304864850c62041 466 Gene3D G3DSA:3.40.50.720 56 215 5.3E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3648 f27ac49c281413822304864850c62041 466 Gene3D G3DSA:3.40.50.720 251 292 5.3E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3648 f27ac49c281413822304864850c62041 466 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 58 177 1.7E-21 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB3648 f27ac49c281413822304864850c62041 466 SUPERFAMILY SSF55347 187 215 2.94E-7 T 11-11-2016 RB3648 f27ac49c281413822304864850c62041 466 SUPERFAMILY SSF55347 249 315 2.94E-7 T 11-11-2016 RB3363 08668a253159e6f1429e9679a343f9e9 474 SUPERFAMILY SSF55785 47 150 2.23E-11 T 11-11-2016 IPR000014 PAS domain RB3363 08668a253159e6f1429e9679a343f9e9 474 SUPERFAMILY SSF55785 265 389 5.59E-17 T 11-11-2016 IPR000014 PAS domain RB3363 08668a253159e6f1429e9679a343f9e9 474 ProSitePatterns PS00622 LuxR-type HTH domain signature. 425 452 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB3363 08668a253159e6f1429e9679a343f9e9 474 SMART SM00091 26 93 0.0092 T 11-11-2016 IPR000014 PAS domain RB3363 08668a253159e6f1429e9679a343f9e9 474 SMART SM00091 280 346 0.0012 T 11-11-2016 IPR000014 PAS domain RB3363 08668a253159e6f1429e9679a343f9e9 474 SMART SM00421 408 465 6.4E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB3363 08668a253159e6f1429e9679a343f9e9 474 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 425 441 3.0E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB3363 08668a253159e6f1429e9679a343f9e9 474 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 441 453 3.0E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB3363 08668a253159e6f1429e9679a343f9e9 474 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 411 425 3.0E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB3363 08668a253159e6f1429e9679a343f9e9 474 SMART SM00086 100 142 150.0 T 11-11-2016 IPR001610 PAC motif RB3363 08668a253159e6f1429e9679a343f9e9 474 SMART SM00086 349 391 6.4E-7 T 11-11-2016 IPR001610 PAC motif RB3363 08668a253159e6f1429e9679a343f9e9 474 SUPERFAMILY SSF55785 139 266 2.27E-8 T 11-11-2016 IPR000014 PAS domain RB3363 08668a253159e6f1429e9679a343f9e9 474 Gene3D G3DSA:1.10.10.10 402 466 7.2E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3363 08668a253159e6f1429e9679a343f9e9 474 Gene3D G3DSA:3.30.450.20 44 154 7.1E-9 T 11-11-2016 RB3363 08668a253159e6f1429e9679a343f9e9 474 SUPERFAMILY SSF46894 401 467 2.38E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB3363 08668a253159e6f1429e9679a343f9e9 474 Pfam PF13426 PAS domain 46 141 1.1E-4 T 11-11-2016 IPR000014 PAS domain RB3363 08668a253159e6f1429e9679a343f9e9 474 Gene3D G3DSA:3.30.450.20 266 389 1.3E-16 T 11-11-2016 RB3363 08668a253159e6f1429e9679a343f9e9 474 Pfam PF00989 PAS fold 280 388 1.4E-10 T 11-11-2016 IPR013767 PAS fold GO:0006355 RB3363 08668a253159e6f1429e9679a343f9e9 474 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 395 5.7E-15 T 11-11-2016 IPR000014 PAS domain RB3363 08668a253159e6f1429e9679a343f9e9 474 Gene3D G3DSA:3.30.450.20 155 265 3.6E-11 T 11-11-2016 RB3363 08668a253159e6f1429e9679a343f9e9 474 Pfam PF00196 Bacterial regulatory proteins, luxR family 410 464 2.1E-18 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB5056 b480dd6a7044cc8dbb8b02367ec06a32 367 SMART SM00382 77 261 2.6E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5056 b480dd6a7044cc8dbb8b02367ec06a32 367 SUPERFAMILY SSF52540 61 282 1.5E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5056 b480dd6a7044cc8dbb8b02367ec06a32 367 Pfam PF00005 ABC transporter 69 212 3.0E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB5056 b480dd6a7044cc8dbb8b02367ec06a32 367 ProSitePatterns PS00211 ABC transporters family signature. 185 199 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB5056 b480dd6a7044cc8dbb8b02367ec06a32 367 Gene3D G3DSA:3.40.50.300 31 284 3.8E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2118 6845555c4fc6d44d5e94848c05bc1d4c 382 Gene3D G3DSA:3.20.20.120 34 95 8.6E-4 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB2118 6845555c4fc6d44d5e94848c05bc1d4c 382 PIRSF PIRSF004640 1 382 3.7E-119 T 11-11-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RB2118 6845555c4fc6d44d5e94848c05bc1d4c 382 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 10 345 6.9E-87 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RB2118 6845555c4fc6d44d5e94848c05bc1d4c 382 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 379 32.139 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RB2118 6845555c4fc6d44d5e94848c05bc1d4c 382 Pfam PF04551 GcpE protein 12 375 5.6E-98 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RB11839 1d48b81b215010e20d4eac492e0db6d9 166 Pfam PF01643 Acyl-ACP thioesterase 53 149 2.2E-11 T 11-11-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 RB11839 1d48b81b215010e20d4eac492e0db6d9 166 Gene3D G3DSA:3.10.129.10 16 150 5.1E-33 T 11-11-2016 IPR029069 HotDog domain RB11839 1d48b81b215010e20d4eac492e0db6d9 166 SUPERFAMILY SSF54637 16 156 3.74E-37 T 11-11-2016 IPR029069 HotDog domain RB12007 a8492775a6b570875bd702f265555827 526 Gene3D G3DSA:1.25.40.80 187 330 9.8E-55 T 11-11-2016 RB12007 a8492775a6b570875bd702f265555827 526 SUPERFAMILY SSF52425 42 212 3.14E-45 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB12007 a8492775a6b570875bd702f265555827 526 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 370 382 - T 11-11-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RB12007 a8492775a6b570875bd702f265555827 526 Pfam PF00875 DNA photolyase 42 208 1.4E-35 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB12007 a8492775a6b570875bd702f265555827 526 Gene3D G3DSA:3.40.50.620 39 186 2.1E-42 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB12007 a8492775a6b570875bd702f265555827 526 Pfam PF03441 FAD binding domain of DNA photolyase 323 516 2.6E-64 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB12007 a8492775a6b570875bd702f265555827 526 Gene3D G3DSA:1.10.579.10 331 519 2.2E-74 T 11-11-2016 RB12007 a8492775a6b570875bd702f265555827 526 PRINTS PR00147 DNA photolyase signature 370 386 3.0E-15 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RB12007 a8492775a6b570875bd702f265555827 526 PRINTS PR00147 DNA photolyase signature 390 408 3.0E-15 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RB12007 a8492775a6b570875bd702f265555827 526 PRINTS PR00147 DNA photolyase signature 429 443 3.0E-15 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RB12007 a8492775a6b570875bd702f265555827 526 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 42 470 2.8E-171 T 11-11-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 RB12007 a8492775a6b570875bd702f265555827 526 SUPERFAMILY SSF48173 235 522 2.35E-98 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB419 9586ca026dd1259fe70b95efdd633cc8 375 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 203 215 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB419 9586ca026dd1259fe70b95efdd633cc8 375 Gene3D G3DSA:1.10.510.10 191 338 5.7E-35 T 11-11-2016 RB419 9586ca026dd1259fe70b95efdd633cc8 375 SMART SM00220 49 340 3.7E-23 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB419 9586ca026dd1259fe70b95efdd633cc8 375 SUPERFAMILY SSF56112 31 150 1.75E-50 T 11-11-2016 IPR011009 Protein kinase-like domain RB419 9586ca026dd1259fe70b95efdd633cc8 375 SUPERFAMILY SSF56112 179 337 1.75E-50 T 11-11-2016 IPR011009 Protein kinase-like domain RB419 9586ca026dd1259fe70b95efdd633cc8 375 Gene3D G3DSA:3.30.200.20 45 190 2.6E-16 T 11-11-2016 RB419 9586ca026dd1259fe70b95efdd633cc8 375 Pfam PF00069 Protein kinase domain 49 337 6.7E-36 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB4438 2b14c05c2df46f2bc48e9a120be18d54 160 Gene3D G3DSA:2.30.110.10 4 153 8.2E-47 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB4438 2b14c05c2df46f2bc48e9a120be18d54 160 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 4 148 1.6E-45 T 11-11-2016 RB4438 2b14c05c2df46f2bc48e9a120be18d54 160 SUPERFAMILY SSF50475 4 129 3.55E-34 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB10663 4f99ee0633a82d9e9b69633bc06cad47 431 Pfam PF00149 Calcineurin-like phosphoesterase 5 202 2.9E-13 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB10663 4f99ee0633a82d9e9b69633bc06cad47 431 PIRSF PIRSF033091 1 431 1.2E-141 T 11-11-2016 IPR014576 Predicted phosphoesterase, YhaO type RB10663 4f99ee0633a82d9e9b69633bc06cad47 431 Gene3D G3DSA:3.60.21.10 5 254 4.6E-43 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10663 4f99ee0633a82d9e9b69633bc06cad47 431 SUPERFAMILY SSF56300 5 318 2.66E-52 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB12107 bff20e0af12a4835accc36c8398d4696 507 PRINTS PR00481 Cytosol aminopeptidase signature 329 350 2.4E-48 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 PRINTS PR00481 Cytosol aminopeptidase signature 292 313 2.4E-48 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 PRINTS PR00481 Cytosol aminopeptidase signature 351 371 2.4E-48 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 PRINTS PR00481 Cytosol aminopeptidase signature 379 394 2.4E-48 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 PRINTS PR00481 Cytosol aminopeptidase signature 270 287 2.4E-48 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 SUPERFAMILY SSF53187 191 505 9.94E-116 T 11-11-2016 RB12107 bff20e0af12a4835accc36c8398d4696 507 SUPERFAMILY SSF52949 59 150 1.65E-7 T 11-11-2016 RB12107 bff20e0af12a4835accc36c8398d4696 507 Gene3D G3DSA:3.40.630.10 181 505 2.3E-127 T 11-11-2016 RB12107 bff20e0af12a4835accc36c8398d4696 507 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 355 362 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 16 507 31.503 T 11-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 195 500 3.3E-116 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 51 164 4.3E-17 T 11-11-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RB12107 bff20e0af12a4835accc36c8398d4696 507 Gene3D G3DSA:3.40.220.10 55 156 5.1E-10 T 11-11-2016 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 SUPERFAMILY SSF50692 626 747 1.97E-42 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 Gene3D G3DSA:2.40.40.20 583 747 9.6E-46 T 11-11-2016 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 SUPERFAMILY SSF53706 51 619 5.63E-155 T 11-11-2016 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 104 6.7E-11 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 Pfam PF00384 Molybdopterin oxidoreductase 109 534 2.0E-63 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 Gene3D G3DSA:3.40.228.10 186 367 7.3E-56 T 11-11-2016 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 Gene3D G3DSA:2.20.25.90 52 107 1.8E-14 T 11-11-2016 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 57 74 - T 11-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 Pfam PF01568 Molydopterin dinucleotide binding domain 636 741 2.7E-34 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 SMART SM00926 52 106 4.8E-12 T 11-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 Gene3D G3DSA:3.40.50.740 368 582 1.0E-73 T 11-11-2016 RB378 fda7e0c8050ceb01d1bfb66febe88fe2 753 Gene3D G3DSA:3.40.50.740 111 185 1.0E-73 T 11-11-2016 RB128 0757ee7591ef449c32de3a75d267b631 403 Gene3D G3DSA:3.40.50.300 143 400 2.8E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB128 0757ee7591ef449c32de3a75d267b631 403 Gene3D G3DSA:3.30.450.90 22 138 3.9E-23 T 11-11-2016 RB128 0757ee7591ef449c32de3a75d267b631 403 SUPERFAMILY SSF52540 23 398 1.92E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB128 0757ee7591ef449c32de3a75d267b631 403 Pfam PF00437 Type II/IV secretion system protein 36 308 5.0E-44 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB9374 3e951c63209d4a899537fcd9871d7762 662 Pfam PF16124 RecQ zinc-binding 535 581 5.1E-6 T 11-11-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RB9374 3e951c63209d4a899537fcd9871d7762 662 SMART SM00487 34 226 2.3E-29 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB9374 3e951c63209d4a899537fcd9871d7762 662 Gene3D G3DSA:3.40.50.300 215 377 4.5E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9374 3e951c63209d4a899537fcd9871d7762 662 Gene3D G3DSA:3.40.50.300 535 547 4.5E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9374 3e951c63209d4a899537fcd9871d7762 662 Pfam PF00270 DEAD/DEAH box helicase 40 202 3.2E-17 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB9374 3e951c63209d4a899537fcd9871d7762 662 Gene3D G3DSA:3.40.50.300 27 212 4.3E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9374 3e951c63209d4a899537fcd9871d7762 662 Gene3D G3DSA:1.10.10.10 548 660 1.1E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9374 3e951c63209d4a899537fcd9871d7762 662 Pfam PF00271 Helicase conserved C-terminal domain 240 348 1.5E-15 T 11-11-2016 IPR001650 Helicase, C-terminal RB9374 3e951c63209d4a899537fcd9871d7762 662 SMART SM00490 268 349 4.9E-25 T 11-11-2016 IPR001650 Helicase, C-terminal RB9374 3e951c63209d4a899537fcd9871d7762 662 SUPERFAMILY SSF52540 79 364 2.87E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9374 3e951c63209d4a899537fcd9871d7762 662 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 28 369 2.6E-96 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 SMART SM00320 303 341 11.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 SMART SM00320 126 175 4.6E-6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 SMART SM00320 176 217 16.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 SMART SM00320 348 385 1.3 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 SMART SM00320 90 123 5.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 SMART SM00320 223 258 9.6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 SMART SM00320 261 300 2.7E-5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 SUPERFAMILY SSF50978 97 392 4.0E-48 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 Gene3D G3DSA:2.130.10.10 95 387 1.8E-48 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 Pfam PF00400 WD domain, G-beta repeat 98 121 0.023 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9329 737bd56c8fdfaf0104f37e24b9be7948 412 Pfam PF00400 WD domain, G-beta repeat 143 175 4.4E-4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB8773 e4e5db2b839ec8d61d16ee90d9f92d9a 576 Pfam PF01145 SPFH domain / Band 7 family 226 415 3.1E-31 T 11-11-2016 IPR001107 Band 7 domain RB8773 e4e5db2b839ec8d61d16ee90d9f92d9a 576 SMART SM00244 219 399 4.7E-4 T 11-11-2016 IPR001107 Band 7 domain RB8773 e4e5db2b839ec8d61d16ee90d9f92d9a 576 SUPERFAMILY SSF117892 252 405 8.24E-9 T 11-11-2016 IPR001107 Band 7 domain RB10683 8b82a2c93aae2a1ba1ad3eaeda893f83 364 PIRSF PIRSF006621 18 354 6.8E-89 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RB10683 8b82a2c93aae2a1ba1ad3eaeda893f83 364 Gene3D G3DSA:3.20.20.70 26 274 1.5E-71 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB10683 8b82a2c93aae2a1ba1ad3eaeda893f83 364 Gene3D G3DSA:1.10.1200.80 279 345 4.0E-15 T 11-11-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RB10683 8b82a2c93aae2a1ba1ad3eaeda893f83 364 Pfam PF01207 Dihydrouridine synthase (Dus) 32 342 1.1E-77 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RB10683 8b82a2c93aae2a1ba1ad3eaeda893f83 364 SUPERFAMILY SSF51395 28 345 4.88E-77 T 11-11-2016 RB10683 8b82a2c93aae2a1ba1ad3eaeda893f83 364 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 21 345 5.8E-95 T 11-11-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RB10683 8b82a2c93aae2a1ba1ad3eaeda893f83 364 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 118 137 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RB3353 406331745b9abdda3b69b5d19a0dda2f 409 Gene3D G3DSA:2.120.10.10 58 394 2.5E-96 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3353 406331745b9abdda3b69b5d19a0dda2f 409 Pfam PF13088 BNR repeat-like domain 76 371 9.7E-37 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3353 406331745b9abdda3b69b5d19a0dda2f 409 SUPERFAMILY SSF50939 51 392 4.49E-100 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB4043 b31e90b0d5b4b16a69da868d6a19ecff 451 TIGRFAM TIGR03991 alt_bact_glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 20 436 2.5E-137 T 11-11-2016 IPR023917 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type RB4043 b31e90b0d5b4b16a69da868d6a19ecff 451 Gene3D G3DSA:2.160.10.10 219 392 1.1E-11 T 11-11-2016 RB4043 b31e90b0d5b4b16a69da868d6a19ecff 451 Pfam PF13562 Sugar nucleotidyl transferase 22 208 1.3E-30 T 11-11-2016 IPR023917 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type RB4043 b31e90b0d5b4b16a69da868d6a19ecff 451 SUPERFAMILY SSF51161 240 395 8.3E-14 T 11-11-2016 IPR011004 Trimeric LpxA-like RB5897 297161acaf71a8b0ce88f8de35440000 377 Gene3D G3DSA:3.40.30.10 42 153 3.2E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5897 297161acaf71a8b0ce88f8de35440000 377 Pfam PF03190 Protein of unknown function, DUF255 38 131 4.9E-11 T 11-11-2016 IPR004879 Domain of unknown function DUF255 RB5897 297161acaf71a8b0ce88f8de35440000 377 SUPERFAMILY SSF52833 40 154 2.12E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11001 74cf555cda247131d200d4a52f1317d9 294 Pfam PF09359 VTC domain 35 264 5.5E-34 T 11-11-2016 IPR018966 VTC domain RB3293 29e93315db3bacb0bf436aaaeb578762 290 SUPERFAMILY SSF52799 44 164 7.07E-14 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like RB3293 29e93315db3bacb0bf436aaaeb578762 290 SUPERFAMILY SSF47175 250 289 8.39E-6 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 RB3293 29e93315db3bacb0bf436aaaeb578762 290 Gene3D G3DSA:3.90.190.10 41 164 1.5E-17 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like RB3293 29e93315db3bacb0bf436aaaeb578762 290 Gene3D G3DSA:1.20.120.10 255 289 2.0E-4 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 RB10820 e0ae782b387c5d37594bafa2f39d0e4c 349 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 232 311 1.7E-7 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RB10820 e0ae782b387c5d37594bafa2f39d0e4c 349 Pfam PF01436 NHL repeat 318 345 5.1E-7 T 11-11-2016 IPR001258 NHL repeat GO:0005515 RB10820 e0ae782b387c5d37594bafa2f39d0e4c 349 SUPERFAMILY SSF63829 72 348 1.6E-50 T 11-11-2016 RB10820 e0ae782b387c5d37594bafa2f39d0e4c 349 Gene3D G3DSA:2.120.10.30 63 347 3.4E-65 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB10195 4fa6cf0f57224d331294438d157ffed9 264 SUPERFAMILY SSF52317 43 262 1.65E-39 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB10195 4fa6cf0f57224d331294438d157ffed9 264 Gene3D G3DSA:3.40.50.880 40 262 1.4E-30 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB10195 4fa6cf0f57224d331294438d157ffed9 264 Pfam PF06283 Trehalose utilisation 44 259 1.9E-24 T 11-11-2016 IPR029010 ThuA-like domain RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.8E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.8E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 1.8E-64 T 11-11-2016 RB8029 9647fabc91304e6e8a4ba74f9e644129 245 SUPERFAMILY SSF51735 5 244 2.51E-82 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8029 9647fabc91304e6e8a4ba74f9e644129 245 Gene3D G3DSA:3.40.50.720 4 244 2.1E-83 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.8E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.8E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.8E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.8E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 6.8E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.8E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8029 9647fabc91304e6e8a4ba74f9e644129 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB8029 9647fabc91304e6e8a4ba74f9e644129 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 7.0E-4 T 11-11-2016 RB10114 70a3f5bc0a01c30514d6f464cf028658 259 SUPERFAMILY SSF51366 12 257 1.88E-83 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB10114 70a3f5bc0a01c30514d6f464cf028658 259 Gene3D G3DSA:3.20.20.70 1 257 7.5E-97 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB10114 70a3f5bc0a01c30514d6f464cf028658 259 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 258 34.32 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RB10114 70a3f5bc0a01c30514d6f464cf028658 259 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 256 6.3E-88 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RB10114 70a3f5bc0a01c30514d6f464cf028658 259 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 52 70 - T 11-11-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 286 1.4E-137 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-11-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 Pfam PF02629 CoA binding domain 6 99 4.1E-29 T 11-11-2016 IPR003781 CoA-binding GO:0048037 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 Gene3D G3DSA:3.40.50.720 2 119 1.0E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 Gene3D G3DSA:3.40.50.261 120 287 6.8E-74 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 Pfam PF00549 CoA-ligase 151 271 8.7E-20 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 SMART SM00881 4 100 1.5E-34 T 11-11-2016 IPR003781 CoA-binding GO:0048037 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 3.3E-37 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 3.3E-37 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 3.3E-37 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 3.3E-37 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 PIRSF PIRSF001553 1 290 9.6E-127 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 SUPERFAMILY SSF51735 1 122 4.98E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10619 89cee36c948ad153afc8bcc6cb8a7bf8 290 SUPERFAMILY SSF52210 123 285 1.96E-55 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 Gene3D G3DSA:2.120.10.30 440 804 2.7E-34 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 Gene3D G3DSA:1.10.760.10 1231 1255 1.2E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 Gene3D G3DSA:1.10.760.10 1115 1191 1.2E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 SUPERFAMILY SSF46626 1231 1255 1.73E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 SUPERFAMILY SSF46626 1111 1185 1.73E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1118 1254 8.2E-28 T 11-11-2016 IPR013427 Haem-binding domain, putative RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 SUPERFAMILY SSF50952 444 802 4.45E-21 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 Pfam PF06439 Domain of Unknown Function (DUF1080) 28 225 1.2E-31 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 Gene3D G3DSA:2.60.120.260 310 356 1.4E-6 T 11-11-2016 IPR008979 Galactose-binding domain-like RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 SUPERFAMILY SSF49785 310 356 2.55E-7 T 11-11-2016 IPR008979 Galactose-binding domain-like RB728 c3dbaf8b15f952f263dd36e99c4efc0c 1266 Pfam PF00034 Cytochrome c 1121 1171 1.1E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9017 6e49f0a441ad182f4161b97f1d99bc8e 193 SUPERFAMILY SSF88659 103 189 1.73E-5 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9017 6e49f0a441ad182f4161b97f1d99bc8e 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 186 1.1E-17 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9017 6e49f0a441ad182f4161b97f1d99bc8e 193 Gene3D G3DSA:1.10.1740.10 16 112 2.5E-16 T 11-11-2016 RB9017 6e49f0a441ad182f4161b97f1d99bc8e 193 Pfam PF04542 Sigma-70 region 2 26 96 2.9E-10 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9017 6e49f0a441ad182f4161b97f1d99bc8e 193 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB9017 6e49f0a441ad182f4161b97f1d99bc8e 193 SUPERFAMILY SSF88946 8 99 4.71E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SUPERFAMILY SSF50249 663 749 3.06E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SUPERFAMILY SSF53098 349 496 1.37E-49 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SMART SM00316 676 747 5.9E-25 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SUPERFAMILY SSF47781 497 585 1.67E-27 T 11-11-2016 IPR010994 RuvA domain 2-like RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Gene3D G3DSA:1.10.3500.10 478 525 8.4E-85 T 11-11-2016 IPR023323 Tex-like domain RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Gene3D G3DSA:1.10.3500.10 144 349 8.4E-85 T 11-11-2016 IPR023323 Tex-like domain RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SMART SM00278 531 550 0.11 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SMART SM00278 561 580 240.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Pfam PF09371 Tex-like protein N-terminal domain 43 228 3.9E-65 T 11-11-2016 IPR018974 Tex-like protein, N-terminal RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Gene3D G3DSA:1.10.150.310 526 657 5.1E-45 T 11-11-2016 IPR023097 Tex RuvX-like domain RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Pfam PF00575 S1 RNA binding domain 676 747 1.4E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Gene3D G3DSA:3.30.420.140 354 477 1.5E-51 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Gene3D G3DSA:2.40.50.140 663 748 4.4E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SUPERFAMILY SSF47781 587 659 2.89E-19 T 11-11-2016 IPR010994 RuvA domain 2-like RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Pfam PF16921 Tex protein YqgF-like domain 354 478 2.3E-54 T 11-11-2016 IPR032639 Tex protein, YqgF-like domain RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Gene3D G3DSA:1.10.10.650 40 143 4.0E-40 T 11-11-2016 IPR023319 Tex-like protein, HTH domain RB3313 632cdba3b14861f6033cd8a3f47d756c 750 Pfam PF12836 Helix-hairpin-helix motif 518 582 6.3E-28 T 11-11-2016 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SMART SM00732 353 451 4.7E-36 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RB3313 632cdba3b14861f6033cd8a3f47d756c 750 SUPERFAMILY SSF158832 38 348 8.11E-103 T 11-11-2016 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 Pfam PF00989 PAS fold 142 241 2.3E-9 T 11-11-2016 IPR013767 PAS fold GO:0006355 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 SUPERFAMILY SSF52172 11 143 2.28E-31 T 11-11-2016 IPR011006 CheY-like superfamily RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 Gene3D G3DSA:3.40.50.2300 11 130 5.5E-28 T 11-11-2016 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 SUPERFAMILY SSF55874 322 480 8.38E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 SMART SM00448 10 121 5.0E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 Gene3D G3DSA:3.30.450.20 131 251 2.2E-19 T 11-11-2016 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 Pfam PF00072 Response regulator receiver domain 12 121 5.5E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 260 4.3E-17 T 11-11-2016 IPR000014 PAS domain RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 SUPERFAMILY SSF55785 124 252 9.6E-20 T 11-11-2016 IPR000014 PAS domain RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 Gene3D G3DSA:3.30.565.10 336 480 1.9E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 479 3.1E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 5.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 5.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 5.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 SMART SM00091 139 206 6.3E-6 T 11-11-2016 IPR000014 PAS domain RB11191 0d7a33f389a69fc4e4e7e78afe095b66 488 SMART SM00387 377 482 3.6E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10374 7c7f11db4f1eedd0a3a8b42559eb4d78 242 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 47 215 12.647 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RB10374 7c7f11db4f1eedd0a3a8b42559eb4d78 242 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 97 105 1.3E-12 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RB10374 7c7f11db4f1eedd0a3a8b42559eb4d78 242 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 190 206 1.3E-12 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RB10374 7c7f11db4f1eedd0a3a8b42559eb4d78 242 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 157 1.3E-12 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RB10374 7c7f11db4f1eedd0a3a8b42559eb4d78 242 Pfam PF01252 Signal peptidase (SPase) II 60 210 1.6E-21 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 Gene3D G3DSA:2.60.40.420 236 258 4.0E-32 T 11-11-2016 IPR008972 Cupredoxin RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 Gene3D G3DSA:2.60.40.420 87 190 4.0E-32 T 11-11-2016 IPR008972 Cupredoxin RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 SUPERFAMILY SSF49503 236 270 1.74E-25 T 11-11-2016 IPR008972 Cupredoxin RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 SUPERFAMILY SSF49503 113 190 1.74E-25 T 11-11-2016 IPR008972 Cupredoxin RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 145 184 3.3E-5 T 11-11-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 20 98 1.4E-8 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 SUPERFAMILY SSF46626 283 372 2.09E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 Gene3D G3DSA:1.10.760.10 282 372 2.7E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 Pfam PF00034 Cytochrome c 283 372 2.5E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 SUPERFAMILY SSF81464 17 109 1.24E-15 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 Gene3D G3DSA:1.10.287.90 20 86 4.0E-12 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 PRINTS PR00605 Class IC cytochrome C signature 290 301 7.9E-6 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RB12681 e30dc90b36eb09ab4ab009fbdd6492af 393 PRINTS PR00605 Class IC cytochrome C signature 347 369 7.9E-6 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RB5197 920af6852b47a79624ccb51dcc347216 771 Gene3D G3DSA:3.40.50.2000 220 431 2.9E-24 T 11-11-2016 RB5197 920af6852b47a79624ccb51dcc347216 771 Gene3D G3DSA:3.90.1070.10 566 631 7.0E-20 T 11-11-2016 RB5197 920af6852b47a79624ccb51dcc347216 771 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 479 715 1.1E-82 T 11-11-2016 IPR006380 Sucrose-phosphatase, N-terminal RB5197 920af6852b47a79624ccb51dcc347216 771 TIGRFAM TIGR02472 sucr_P_syn_N: sucrose-phosphate synthase, putative, glycosyltransferase domain 9 451 7.5E-230 T 11-11-2016 IPR012822 Sucrose-phosphate synthase, glycosyltransferase domain RB5197 920af6852b47a79624ccb51dcc347216 771 Pfam PF13439 Glycosyltransferase Family 4 34 235 2.5E-17 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB5197 920af6852b47a79624ccb51dcc347216 771 Pfam PF00534 Glycosyl transferases group 1 256 431 3.4E-25 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB5197 920af6852b47a79624ccb51dcc347216 771 Gene3D G3DSA:3.40.50.1000 479 556 4.6E-24 T 11-11-2016 IPR023214 HAD-like domain RB5197 920af6852b47a79624ccb51dcc347216 771 Gene3D G3DSA:3.40.50.1000 632 713 4.6E-24 T 11-11-2016 IPR023214 HAD-like domain RB5197 920af6852b47a79624ccb51dcc347216 771 TIGRFAM TIGR02471 sucr_syn_bact_C: sucrose-phosphate synthase, sucrose phosphatase-like domain 480 715 2.1E-115 T 11-11-2016 IPR012821 Sucrose phosphate synthase, sucrose phosphatase-like domain RB5197 920af6852b47a79624ccb51dcc347216 771 SUPERFAMILY SSF56784 479 687 5.37E-24 T 11-11-2016 IPR023214 HAD-like domain RB5197 920af6852b47a79624ccb51dcc347216 771 SUPERFAMILY SSF53756 26 450 5.65E-68 T 11-11-2016 RB6822 69c285f90096f126a2b7e61f22749bc4 404 PIRSF PIRSF001456 1 404 1.2E-128 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RB6822 69c285f90096f126a2b7e61f22749bc4 404 Gene3D G3DSA:3.60.150.10 9 394 5.1E-108 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RB6822 69c285f90096f126a2b7e61f22749bc4 404 Hamap MF_00300 Chorismate synthase [aroC]. 9 396 28.664 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RB6822 69c285f90096f126a2b7e61f22749bc4 404 SUPERFAMILY SSF103263 6 71 3.01E-91 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RB6822 69c285f90096f126a2b7e61f22749bc4 404 SUPERFAMILY SSF103263 100 397 3.01E-91 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RB6822 69c285f90096f126a2b7e61f22749bc4 404 Pfam PF01264 Chorismate synthase 95 389 6.8E-68 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RB6822 69c285f90096f126a2b7e61f22749bc4 404 Pfam PF01264 Chorismate synthase 9 99 2.1E-17 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 Gene3D G3DSA:2.40.50.140 17 103 5.5E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 15 462 1.9E-187 T 11-11-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 Gene3D G3DSA:3.30.930.10 106 459 1.3E-115 T 11-11-2016 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 SUPERFAMILY SSF55681 95 460 7.67E-98 T 11-11-2016 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 462 44.668 T 11-11-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 205 217 1.2E-15 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 377 393 1.2E-15 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 221 234 1.2E-15 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 417 431 1.2E-15 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 SUPERFAMILY SSF50249 15 102 5.71E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 Pfam PF01336 OB-fold nucleic acid binding domain 19 99 3.6E-12 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RB13263 14969f7a1aa62a67bea6e9ccf90331e4 462 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 456 1.9E-84 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 Pfam PF12833 Helix-turn-helix domain 170 248 2.3E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 SUPERFAMILY SSF55785 28 133 7.15E-11 T 11-11-2016 IPR000014 PAS domain RB2684 e3404e8513cb184d70b5a5cd431176c6 254 Pfam PF08448 PAS fold 35 132 3.8E-14 T 11-11-2016 IPR013656 PAS fold-4 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 SMART SM00342 164 247 3.8E-26 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 201 243 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 Gene3D G3DSA:1.10.10.60 201 250 2.4E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 Gene3D G3DSA:1.10.10.60 149 200 1.6E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 Gene3D G3DSA:3.30.450.20 28 132 4.7E-11 T 11-11-2016 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 SUPERFAMILY SSF46689 200 250 5.82E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 SUPERFAMILY SSF46689 148 198 3.45E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB2684 e3404e8513cb184d70b5a5cd431176c6 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 149 193 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB9435 f944c6f89abb4a8d6fdf4c7672897440 1030 Pfam PF07596 Protein of unknown function (DUF1559) 837 979 2.3E-24 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB9435 f944c6f89abb4a8d6fdf4c7672897440 1030 Pfam PF00069 Protein kinase domain 105 363 1.4E-50 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9435 f944c6f89abb4a8d6fdf4c7672897440 1030 SUPERFAMILY SSF56112 102 410 9.58E-72 T 11-11-2016 IPR011009 Protein kinase-like domain RB9435 f944c6f89abb4a8d6fdf4c7672897440 1030 SMART SM00220 105 373 3.7E-60 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9435 f944c6f89abb4a8d6fdf4c7672897440 1030 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 111 134 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB9435 f944c6f89abb4a8d6fdf4c7672897440 1030 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 224 236 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB9435 f944c6f89abb4a8d6fdf4c7672897440 1030 Gene3D G3DSA:1.10.510.10 214 362 1.5E-36 T 11-11-2016 RB9435 f944c6f89abb4a8d6fdf4c7672897440 1030 Gene3D G3DSA:3.30.200.20 99 213 1.2E-31 T 11-11-2016 RB10120 cce38586eef276713efa1310ebab1391 218 TIGRFAM TIGR02984 Sig-70_plancto1: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 22 209 5.0E-72 T 11-11-2016 IPR014326 RNA polymerase sigma-70 factor, Planctomycetaceae RB10120 cce38586eef276713efa1310ebab1391 218 SUPERFAMILY SSF88946 9 106 2.67E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10120 cce38586eef276713efa1310ebab1391 218 SUPERFAMILY SSF88659 125 208 8.97E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10120 cce38586eef276713efa1310ebab1391 218 Pfam PF08281 Sigma-70, region 4 153 204 7.9E-13 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10120 cce38586eef276713efa1310ebab1391 218 Gene3D G3DSA:1.10.10.10 147 209 2.3E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10120 cce38586eef276713efa1310ebab1391 218 Gene3D G3DSA:1.10.1740.10 10 114 1.9E-15 T 11-11-2016 RB10120 cce38586eef276713efa1310ebab1391 218 Pfam PF04542 Sigma-70 region 2 34 99 2.5E-6 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10120 cce38586eef276713efa1310ebab1391 218 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 207 1.5E-22 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6920 e3484273d9f0cc7c49a31d771bac0397 355 Gene3D G3DSA:3.30.700.10 15 83 8.8E-8 T 11-11-2016 RB6920 e3484273d9f0cc7c49a31d771bac0397 355 SUPERFAMILY SSF54523 15 143 5.73E-23 T 11-11-2016 RB6920 e3484273d9f0cc7c49a31d771bac0397 355 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 6.1E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6920 e3484273d9f0cc7c49a31d771bac0397 355 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6920 e3484273d9f0cc7c49a31d771bac0397 355 Pfam PF07596 Protein of unknown function (DUF1559) 39 335 3.0E-79 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6920 e3484273d9f0cc7c49a31d771bac0397 355 Pfam PF13633 Prokaryotic N-terminal methylation site 13 38 2.7E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8485 b5dce7899f1b756a4bd800a5adc9ddd3 417 Gene3D G3DSA:1.10.10.10 111 169 3.9E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8485 b5dce7899f1b756a4bd800a5adc9ddd3 417 Pfam PF08281 Sigma-70, region 4 116 168 7.0E-8 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8485 b5dce7899f1b756a4bd800a5adc9ddd3 417 SUPERFAMILY SSF88659 107 170 1.07E-10 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8485 b5dce7899f1b756a4bd800a5adc9ddd3 417 Gene3D G3DSA:1.10.1740.10 12 100 2.9E-8 T 11-11-2016 RB8485 b5dce7899f1b756a4bd800a5adc9ddd3 417 Pfam PF04542 Sigma-70 region 2 34 80 1.4E-8 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8485 b5dce7899f1b756a4bd800a5adc9ddd3 417 SUPERFAMILY SSF88946 10 87 1.1E-9 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8485 b5dce7899f1b756a4bd800a5adc9ddd3 417 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 168 6.4E-14 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10586 b81f6d2ea6ed40a84880d2cfe90bcd79 404 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 333 345 - T 11-11-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RB10586 b81f6d2ea6ed40a84880d2cfe90bcd79 404 SUPERFAMILY SSF55920 154 401 2.88E-43 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB10586 b81f6d2ea6ed40a84880d2cfe90bcd79 404 Gene3D G3DSA:3.90.230.10 154 399 7.6E-48 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB10586 b81f6d2ea6ed40a84880d2cfe90bcd79 404 Pfam PF00557 Metallopeptidase family M24 163 386 3.4E-38 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB2845 0d6bc78c02dfb61a12f1a81b38921ff7 915 Gene3D G3DSA:1.10.760.10 141 239 4.7E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2845 0d6bc78c02dfb61a12f1a81b38921ff7 915 Pfam PF07587 Protein of unknown function (DUF1553) 622 871 4.4E-88 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB2845 0d6bc78c02dfb61a12f1a81b38921ff7 915 Pfam PF07583 Protein of unknown function (DUF1549) 267 478 2.0E-85 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB2845 0d6bc78c02dfb61a12f1a81b38921ff7 915 SUPERFAMILY SSF46626 133 218 1.01E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2845 0d6bc78c02dfb61a12f1a81b38921ff7 915 Pfam PF07635 Planctomycete cytochrome C 143 201 1.3E-19 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB11407 4f1d4090885798db4d15dde495f2b8ca 613 Gene3D G3DSA:3.40.50.300 145 313 9.8E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11407 4f1d4090885798db4d15dde495f2b8ca 613 SMART SM00487 144 332 1.4E-17 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB11407 4f1d4090885798db4d15dde495f2b8ca 613 Pfam PF04851 Type III restriction enzyme, res subunit 149 301 3.5E-34 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RB11407 4f1d4090885798db4d15dde495f2b8ca 613 Pfam PF00271 Helicase conserved C-terminal domain 413 513 1.3E-5 T 11-11-2016 IPR001650 Helicase, C-terminal RB11407 4f1d4090885798db4d15dde495f2b8ca 613 Gene3D G3DSA:3.40.50.300 396 520 9.8E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11407 4f1d4090885798db4d15dde495f2b8ca 613 SUPERFAMILY SSF52540 375 517 6.19E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11407 4f1d4090885798db4d15dde495f2b8ca 613 SUPERFAMILY SSF52540 161 303 6.19E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2771 bd39b31657a2ad23ab9413cb7c400b78 479 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 353 466 1.7E-19 T 11-11-2016 IPR011969 Clan AA aspartic peptidase, C-terminal RB2771 bd39b31657a2ad23ab9413cb7c400b78 479 SUPERFAMILY SSF50630 354 464 3.55E-11 T 11-11-2016 IPR021109 Aspartic peptidase domain RB2771 bd39b31657a2ad23ab9413cb7c400b78 479 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 375 386 - T 11-11-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 RB2771 bd39b31657a2ad23ab9413cb7c400b78 479 Pfam PF13975 gag-polyprotein putative aspartyl protease 364 457 8.3E-18 T 11-11-2016 RB6725 68a65aeb46333a9ed1f63e2088473c8a 323 Gene3D G3DSA:3.40.50.1820 3 320 3.7E-85 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6725 68a65aeb46333a9ed1f63e2088473c8a 323 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 84 100 - T 11-11-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 RB6725 68a65aeb46333a9ed1f63e2088473c8a 323 SUPERFAMILY SSF53474 6 320 5.18E-64 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6725 68a65aeb46333a9ed1f63e2088473c8a 323 Pfam PF07859 alpha/beta hydrolase fold 84 298 2.8E-63 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB6624 60a8e4af2f7308c8805fbfcb8c735f6e 503 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 43 503 7.8E-167 T 11-11-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 RB6624 60a8e4af2f7308c8805fbfcb8c735f6e 503 Pfam PF02397 Bacterial sugar transferase 313 497 7.3E-55 T 11-11-2016 IPR003362 Bacterial sugar transferase RB6624 60a8e4af2f7308c8805fbfcb8c735f6e 503 Pfam PF13727 CoA-binding domain 79 277 2.5E-30 T 11-11-2016 RB6624 60a8e4af2f7308c8805fbfcb8c735f6e 503 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 42 503 7.0E-134 T 11-11-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 158 2.9E-57 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 6.4E-39 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 115 128 6.4E-39 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 152 170 6.4E-39 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 179 195 6.4E-39 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 6.4E-39 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 163 321 2.9E-68 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 Gene3D G3DSA:3.40.50.720 2 166 1.4E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 156 163 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 SUPERFAMILY SSF51735 3 174 4.69E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 PIRSF PIRSF000149 1 342 3.4E-128 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 SMART SM00846 3 158 1.3E-84 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 332 2.1E-133 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 Gene3D G3DSA:3.30.360.10 167 323 1.5E-77 T 11-11-2016 RB2627 1e61ddf50f0369b26720a1d6e128f0b5 342 SUPERFAMILY SSF55347 157 321 2.38E-71 T 11-11-2016 RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 Pfam PF12799 Leucine Rich repeats (2 copies) 237 275 1.9E-8 T 11-11-2016 IPR025875 Leucine rich repeat 4 RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SUPERFAMILY SSF52058 181 340 6.38E-34 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00369 255 278 4.6 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00369 211 231 120.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00369 233 254 100.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00369 299 322 52.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00365 211 232 160.0 T 11-11-2016 RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00365 277 298 110.0 T 11-11-2016 RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00365 299 320 48.0 T 11-11-2016 RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00365 255 276 1.1 T 11-11-2016 RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00365 233 254 58.0 T 11-11-2016 RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 SMART SM00365 189 210 260.0 T 11-11-2016 RB3895 0106b16aca55aeff6da27a7a0864c4bc 400 Gene3D G3DSA:3.80.10.10 166 340 2.6E-41 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB3003 f19dc8124d9022d8b780e56509aea9e6 507 Pfam PF13360 PQQ-like domain 185 434 4.6E-21 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB3003 f19dc8124d9022d8b780e56509aea9e6 507 Gene3D G3DSA:2.140.10.10 89 505 1.2E-56 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB3003 f19dc8124d9022d8b780e56509aea9e6 507 SMART SM00564 357 397 220.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB3003 f19dc8124d9022d8b780e56509aea9e6 507 SMART SM00564 266 300 0.025 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB3003 f19dc8124d9022d8b780e56509aea9e6 507 SMART SM00564 154 199 81.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB3003 f19dc8124d9022d8b780e56509aea9e6 507 SUPERFAMILY SSF50998 106 505 1.96E-61 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB12673 734ca008a261a2d9cc16e9f8939833f7 510 Pfam PF11821 Protein of unknown function (DUF3341) 19 192 7.1E-63 T 11-11-2016 IPR021776 Protein of unknown function DUF3341 RB12673 734ca008a261a2d9cc16e9f8939833f7 510 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 370 459 3.3E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12673 734ca008a261a2d9cc16e9f8939833f7 510 SUPERFAMILY SSF46626 356 465 9.6E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12673 734ca008a261a2d9cc16e9f8939833f7 510 Gene3D G3DSA:1.10.760.10 365 481 1.1E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11185 b4e757cccbd36f4803763130f9cbc849 303 SUPERFAMILY SSF52402 12 151 2.6E-22 T 11-11-2016 RB11185 b4e757cccbd36f4803763130f9cbc849 303 PRINTS PR01438 Universal stress protein signature 263 275 4.9E-10 T 11-11-2016 IPR006015 Universal stress protein A RB11185 b4e757cccbd36f4803763130f9cbc849 303 PRINTS PR01438 Universal stress protein signature 281 303 4.9E-10 T 11-11-2016 IPR006015 Universal stress protein A RB11185 b4e757cccbd36f4803763130f9cbc849 303 PRINTS PR01438 Universal stress protein signature 126 144 4.9E-10 T 11-11-2016 IPR006015 Universal stress protein A RB11185 b4e757cccbd36f4803763130f9cbc849 303 SUPERFAMILY SSF52402 163 303 7.54E-26 T 11-11-2016 RB11185 b4e757cccbd36f4803763130f9cbc849 303 Gene3D G3DSA:3.40.50.620 11 150 1.8E-23 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB11185 b4e757cccbd36f4803763130f9cbc849 303 Gene3D G3DSA:3.40.50.620 151 303 9.6E-26 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB11185 b4e757cccbd36f4803763130f9cbc849 303 Pfam PF00582 Universal stress protein family 164 303 1.3E-20 T 11-11-2016 IPR006016 UspA GO:0006950 RB11185 b4e757cccbd36f4803763130f9cbc849 303 Pfam PF00582 Universal stress protein family 11 148 3.5E-20 T 11-11-2016 IPR006016 UspA GO:0006950 RB7598 65bc9d57f68f5d3d884b883b6a434bed 489 Pfam PF00753 Metallo-beta-lactamase superfamily 91 306 3.6E-24 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB7598 65bc9d57f68f5d3d884b883b6a434bed 489 SUPERFAMILY SSF56281 34 483 1.49E-106 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB7598 65bc9d57f68f5d3d884b883b6a434bed 489 Pfam PF14863 Alkyl sulfatase dimerisation 344 481 1.1E-42 T 11-11-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 RB7598 65bc9d57f68f5d3d884b883b6a434bed 489 SMART SM00849 94 306 1.2E-22 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB7598 65bc9d57f68f5d3d884b883b6a434bed 489 Gene3D G3DSA:3.60.15.10 70 163 2.6E-50 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB7598 65bc9d57f68f5d3d884b883b6a434bed 489 Gene3D G3DSA:3.60.15.10 205 336 2.6E-50 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB6332 37639cf62b63e1bd8f9c6275ebd09f72 250 SUPERFAMILY SSF52266 59 247 1.83E-23 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6332 37639cf62b63e1bd8f9c6275ebd09f72 250 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 63 234 7.1E-7 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6332 37639cf62b63e1bd8f9c6275ebd09f72 250 Gene3D G3DSA:3.40.50.1110 58 249 1.6E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB279 5630b263364ddad732e2a8de819505ef 308 Pfam PF00005 ABC transporter 18 160 3.3E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB279 5630b263364ddad732e2a8de819505ef 308 Pfam PF13732 Domain of unknown function (DUF4162) 214 303 7.6E-8 T 11-11-2016 IPR025302 Domain of unknown function DUF4162 RB279 5630b263364ddad732e2a8de819505ef 308 SUPERFAMILY SSF52540 2 226 1.66E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB279 5630b263364ddad732e2a8de819505ef 308 Gene3D G3DSA:3.40.50.300 1 229 8.6E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB279 5630b263364ddad732e2a8de819505ef 308 SMART SM00382 26 211 4.0E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10242 a0e58016a9eb8c5c22ca02a895262495 330 SUPERFAMILY SSF46565 4 72 3.53E-29 T 11-11-2016 IPR001623 DnaJ domain RB10242 a0e58016a9eb8c5c22ca02a895262495 330 PRINTS PR00625 DnaJ domain signature 24 39 1.1E-26 T 11-11-2016 IPR001623 DnaJ domain RB10242 a0e58016a9eb8c5c22ca02a895262495 330 PRINTS PR00625 DnaJ domain signature 6 24 1.1E-26 T 11-11-2016 IPR001623 DnaJ domain RB10242 a0e58016a9eb8c5c22ca02a895262495 330 PRINTS PR00625 DnaJ domain signature 61 80 1.1E-26 T 11-11-2016 IPR001623 DnaJ domain RB10242 a0e58016a9eb8c5c22ca02a895262495 330 PRINTS PR00625 DnaJ domain signature 41 61 1.1E-26 T 11-11-2016 IPR001623 DnaJ domain RB10242 a0e58016a9eb8c5c22ca02a895262495 330 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-11-2016 IPR018253 DnaJ domain, conserved site RB10242 a0e58016a9eb8c5c22ca02a895262495 330 Gene3D G3DSA:2.60.260.20 136 223 2.9E-15 T 11-11-2016 RB10242 a0e58016a9eb8c5c22ca02a895262495 330 Gene3D G3DSA:1.10.287.110 3 89 3.6E-32 T 11-11-2016 IPR001623 DnaJ domain RB10242 a0e58016a9eb8c5c22ca02a895262495 330 SUPERFAMILY SSF49493 229 313 1.22E-19 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RB10242 a0e58016a9eb8c5c22ca02a895262495 330 SMART SM00271 3 61 6.4E-30 T 11-11-2016 IPR001623 DnaJ domain RB10242 a0e58016a9eb8c5c22ca02a895262495 330 SUPERFAMILY SSF49493 151 233 1.22E-15 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RB10242 a0e58016a9eb8c5c22ca02a895262495 330 Pfam PF01556 DnaJ C terminal domain 157 302 1.4E-34 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal RB10242 a0e58016a9eb8c5c22ca02a895262495 330 Gene3D G3DSA:2.60.260.20 226 303 2.1E-19 T 11-11-2016 RB10242 a0e58016a9eb8c5c22ca02a895262495 330 Pfam PF00226 DnaJ domain 4 66 7.8E-27 T 11-11-2016 IPR001623 DnaJ domain RB5852 82b42a26065add28b0cebc879a5e340b 1286 SUPERFAMILY SSF49879 101 186 8.91E-12 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB5852 82b42a26065add28b0cebc879a5e340b 1286 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 109 189 3.5E-8 T 11-11-2016 IPR032030 YscD, cytoplasmic domain RB5852 82b42a26065add28b0cebc879a5e340b 1286 Gene3D G3DSA:2.60.200.20 101 186 1.5E-10 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB7706 76dad99498ae620924f4eb9e07eaff68 589 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 416 559 1.7E-21 T 11-11-2016 IPR002178 PTS EIIA type-2 domain RB7706 76dad99498ae620924f4eb9e07eaff68 589 Gene3D G3DSA:3.40.930.10 408 561 3.6E-25 T 11-11-2016 IPR002178 PTS EIIA type-2 domain RB7706 76dad99498ae620924f4eb9e07eaff68 589 SUPERFAMILY SSF55804 412 559 2.22E-21 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RB7706 76dad99498ae620924f4eb9e07eaff68 589 Pfam PF00999 Sodium/hydrogen exchanger family 18 370 4.0E-23 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RB12211 47be9186e1f84a4dad68d523f7fc555c 306 Gene3D G3DSA:3.40.50.300 40 282 2.2E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12211 47be9186e1f84a4dad68d523f7fc555c 306 Pfam PF03796 DnaB-like helicase C terminal domain 43 282 1.2E-24 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 RB12211 47be9186e1f84a4dad68d523f7fc555c 306 SUPERFAMILY SSF52540 37 275 1.16E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 Gene3D G3DSA:1.25.40.10 100 196 1.1E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 Pfam PF00515 Tetratricopeptide repeat 147 178 5.6E-9 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 Gene3D G3DSA:1.25.40.10 296 390 8.8E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 Gene3D G3DSA:1.25.40.10 197 295 4.0E-27 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 Pfam PF13432 Tetratricopeptide repeat 184 245 0.0094 T 11-11-2016 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 Pfam PF13432 Tetratricopeptide repeat 253 313 1.8E-7 T 11-11-2016 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 SUPERFAMILY SSF48452 100 390 1.9E-36 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 SMART SM00028 355 388 66.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 SMART SM00028 247 280 0.023 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 SMART SM00028 281 314 6.8E-6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 SMART SM00028 145 178 4.2E-8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 SMART SM00028 111 144 10.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 SMART SM00028 213 246 2.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5786 004dd4cbd4a12bfba64227aef16ad00c 461 SMART SM00028 179 212 0.46 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9390 ff7c6ab5c5b5d354ac2471ba6a80102b 1012 Pfam PF03958 Bacterial type II/III secretion system short domain 465 547 3.4E-7 T 11-11-2016 IPR005644 NolW-like RB9390 ff7c6ab5c5b5d354ac2471ba6a80102b 1012 Pfam PF03958 Bacterial type II/III secretion system short domain 400 459 6.6E-7 T 11-11-2016 IPR005644 NolW-like RB9390 ff7c6ab5c5b5d354ac2471ba6a80102b 1012 Pfam PF03958 Bacterial type II/III secretion system short domain 294 387 1.1E-13 T 11-11-2016 IPR005644 NolW-like RB9390 ff7c6ab5c5b5d354ac2471ba6a80102b 1012 Pfam PF03958 Bacterial type II/III secretion system short domain 738 831 2.2E-8 T 11-11-2016 IPR005644 NolW-like RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 SUPERFAMILY SSF55874 15 225 7.99E-52 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 Gene3D G3DSA:3.30.565.10 14 215 1.2E-71 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 SMART SM00853 507 652 5.9E-44 T 11-11-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 137 1.8E-11 T 11-11-2016 RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 13 692 25.686 T 11-11-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 105 111 - T 11-11-2016 IPR014762 DNA mismatch repair, conserved site RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 15 318 1.7E-95 T 11-11-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 Gene3D G3DSA:3.30.230.10 216 337 1.7E-32 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 221 336 5.5E-35 T 11-11-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 SUPERFAMILY SSF118116 507 694 9.55E-46 T 11-11-2016 RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 SUPERFAMILY SSF54211 202 337 1.18E-32 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 Pfam PF08676 MutL C terminal dimerisation domain 510 652 1.1E-37 T 11-11-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RB7883 f8e0163e3b59a70def7b2a7adcf66b66 705 SMART SM01340 220 338 1.1E-47 T 11-11-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RB13186 677e35e61ff7d416ca69f31216513d4c 772 SUPERFAMILY SSF52743 451 576 1.96E-41 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB13186 677e35e61ff7d416ca69f31216513d4c 772 SUPERFAMILY SSF52743 217 424 1.96E-41 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB13186 677e35e61ff7d416ca69f31216513d4c 772 Gene3D G3DSA:3.40.50.200 235 566 1.9E-24 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB13186 677e35e61ff7d416ca69f31216513d4c 772 Pfam PF00082 Subtilase family 234 563 1.1E-40 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB6087 4c5de7f71085f4e408c2712aad99f453 124 Gene3D G3DSA:3.40.50.2300 18 101 9.5E-10 T 11-11-2016 RB6087 4c5de7f71085f4e408c2712aad99f453 124 Pfam PF00072 Response regulator receiver domain 17 100 2.2E-8 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB6087 4c5de7f71085f4e408c2712aad99f453 124 SUPERFAMILY SSF52172 18 100 3.13E-8 T 11-11-2016 IPR011006 CheY-like superfamily RB10134 1fa403f14ada35d2b258a0ed10432571 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.5E-28 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB10134 1fa403f14ada35d2b258a0ed10432571 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-11-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB10134 1fa403f14ada35d2b258a0ed10432571 104 SUPERFAMILY SSF141091 1 101 1.57E-31 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB10134 1fa403f14ada35d2b258a0ed10432571 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 23.052 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB10134 1fa403f14ada35d2b258a0ed10432571 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 3.3E-32 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8935 23cc671497317bd1a2f69d08b25e817d 404 Gene3D G3DSA:3.30.9.10 129 144 1.8E-13 T 11-11-2016 RB8935 23cc671497317bd1a2f69d08b25e817d 404 Gene3D G3DSA:3.30.9.10 245 340 1.8E-13 T 11-11-2016 RB8935 23cc671497317bd1a2f69d08b25e817d 404 Gene3D G3DSA:3.50.50.60 15 99 1.9E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8935 23cc671497317bd1a2f69d08b25e817d 404 Gene3D G3DSA:3.50.50.60 169 244 1.9E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8935 23cc671497317bd1a2f69d08b25e817d 404 Gene3D G3DSA:3.50.50.60 342 397 1.9E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8935 23cc671497317bd1a2f69d08b25e817d 404 Pfam PF01266 FAD dependent oxidoreductase 23 380 6.6E-66 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RB8935 23cc671497317bd1a2f69d08b25e817d 404 SUPERFAMILY SSF51905 23 255 4.79E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8935 23cc671497317bd1a2f69d08b25e817d 404 SUPERFAMILY SSF51905 342 395 4.79E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8935 23cc671497317bd1a2f69d08b25e817d 404 SUPERFAMILY SSF54373 255 341 1.27E-16 T 11-11-2016 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 Gene3D G3DSA:2.170.120.12 57 177 4.3E-39 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 266 329 1.0E-30 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 323 6.0E-106 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 69 158 1.2E-18 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 256 315 9.3E-21 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 SUPERFAMILY SSF55257 179 233 1.47E-28 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 SUPERFAMILY SSF55257 15 57 1.47E-28 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 SMART SM00662 27 234 4.3E-74 T 11-11-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 Gene3D G3DSA:1.10.150.20 253 328 9.1E-27 T 11-11-2016 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 SUPERFAMILY SSF47789 259 328 1.18E-21 T 11-11-2016 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 SUPERFAMILY SSF56553 57 178 3.01E-38 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 7 324 34.824 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12626 035ed7d9258eee1fc2f888f5fc43d445 331 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 33 228 9.7E-22 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 SUPERFAMILY SSF52540 4 431 2.97E-152 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 Gene3D G3DSA:3.90.170.10 271 428 6.0E-66 T 11-11-2016 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 Gene3D G3DSA:1.10.300.10 101 200 7.2E-19 T 11-11-2016 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 Pfam PF00709 Adenylosuccinate synthetase 5 427 4.3E-163 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 SMART SM00788 3 428 3.1E-248 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 437 173.083 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-11-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-11-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 Gene3D G3DSA:3.40.440.10 4 93 8.7E-65 T 11-11-2016 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 Gene3D G3DSA:3.40.440.10 201 270 8.7E-65 T 11-11-2016 RB12924 66d76dfe8100433a0ee4ac7035108d5e 437 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 3.1E-150 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RB10852 693b5c527daf2ceb4765b6f7a91386cd 497 SUPERFAMILY SSF55931 16 314 7.85E-106 T 11-11-2016 RB10852 693b5c527daf2ceb4765b6f7a91386cd 497 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 14 493 6.8E-153 T 11-11-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RB10852 693b5c527daf2ceb4765b6f7a91386cd 497 Pfam PF02637 GatB domain 349 492 6.8E-36 T 11-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RB10852 693b5c527daf2ceb4765b6f7a91386cd 497 Pfam PF02934 GatB/GatE catalytic domain 17 309 2.0E-105 T 11-11-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RB10852 693b5c527daf2ceb4765b6f7a91386cd 497 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 158 172 - T 11-11-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RB10852 693b5c527daf2ceb4765b6f7a91386cd 497 SMART SM00845 349 494 1.9E-48 T 11-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RB10852 693b5c527daf2ceb4765b6f7a91386cd 497 SUPERFAMILY SSF89095 317 422 5.23E-25 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RB10852 693b5c527daf2ceb4765b6f7a91386cd 497 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 13 495 33.039 T 11-11-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RB12133 e95c974070a85b442bd6ca7463bc6ef7 468 Pfam PF07687 Peptidase dimerisation domain 207 365 1.0E-23 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB12133 e95c974070a85b442bd6ca7463bc6ef7 468 SUPERFAMILY SSF53187 18 209 2.6E-57 T 11-11-2016 RB12133 e95c974070a85b442bd6ca7463bc6ef7 468 SUPERFAMILY SSF53187 380 466 2.6E-57 T 11-11-2016 RB12133 e95c974070a85b442bd6ca7463bc6ef7 468 Gene3D G3DSA:3.30.70.360 220 375 7.7E-62 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB12133 e95c974070a85b442bd6ca7463bc6ef7 468 Pfam PF01546 Peptidase family M20/M25/M40 95 463 2.0E-33 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RB12133 e95c974070a85b442bd6ca7463bc6ef7 468 Gene3D G3DSA:3.40.630.10 404 466 7.5E-57 T 11-11-2016 RB12133 e95c974070a85b442bd6ca7463bc6ef7 468 Gene3D G3DSA:3.40.630.10 31 219 7.5E-57 T 11-11-2016 RB12419 f782ed940ccdc087cd026e7ce7b8f502 159 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 95 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RB12419 f782ed940ccdc087cd026e7ce7b8f502 159 Pfam PF14437 MafB19-like deaminase 10 152 6.3E-36 T 11-11-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RB12419 f782ed940ccdc087cd026e7ce7b8f502 159 Gene3D G3DSA:3.40.140.10 6 151 2.8E-59 T 11-11-2016 RB12419 f782ed940ccdc087cd026e7ce7b8f502 159 SUPERFAMILY SSF53927 5 155 7.03E-54 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 RB12419 f782ed940ccdc087cd026e7ce7b8f502 159 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 13 154 48.864 T 11-11-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RB1444 687b97f45b1eac2921ad497b866cdc3f 277 SUPERFAMILY SSF48452 32 222 1.04E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1444 687b97f45b1eac2921ad497b866cdc3f 277 Gene3D G3DSA:1.25.40.10 34 225 2.5E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1444 687b97f45b1eac2921ad497b866cdc3f 277 SMART SM00028 27 60 48.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1444 687b97f45b1eac2921ad497b866cdc3f 277 SMART SM00028 129 162 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1444 687b97f45b1eac2921ad497b866cdc3f 277 SMART SM00028 61 94 23.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1444 687b97f45b1eac2921ad497b866cdc3f 277 SMART SM00028 163 197 310.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1444 687b97f45b1eac2921ad497b866cdc3f 277 Pfam PF13432 Tetratricopeptide repeat 32 89 0.0015 T 11-11-2016 RB7300 d626930990064b6ffdcd66b3f6521b1a 365 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 24 336 3.7E-73 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 RB7300 d626930990064b6ffdcd66b3f6521b1a 365 Gene3D G3DSA:3.40.50.300 138 225 4.7E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7300 d626930990064b6ffdcd66b3f6521b1a 365 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 33 318 6.0E-48 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 RB7300 d626930990064b6ffdcd66b3f6521b1a 365 SUPERFAMILY SSF52540 55 188 5.77E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7300 d626930990064b6ffdcd66b3f6521b1a 365 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 13 348 24.953 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 RB7300 d626930990064b6ffdcd66b3f6521b1a 365 Gene3D G3DSA:3.40.50.300 55 113 6.9E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6356 59cc68ba38ce4cb51cda59d31933e880 177 PIRSF PIRSF011386 10 177 4.1E-54 T 11-11-2016 IPR018037 Nitrogen fixation protein FixH, Proteobacterial RB6356 59cc68ba38ce4cb51cda59d31933e880 177 Pfam PF05751 FixH 28 173 1.5E-25 T 11-11-2016 IPR008620 Nitrogen fixation protein FixH RB2464 5ab7709697bda459f2eb8f8287e7fa1a 856 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 592 797 6.8E-46 T 11-11-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 RB2464 5ab7709697bda459f2eb8f8287e7fa1a 856 SUPERFAMILY SSF52540 610 791 1.38E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2464 5ab7709697bda459f2eb8f8287e7fa1a 856 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 621 792 1.5E-13 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RB2464 5ab7709697bda459f2eb8f8287e7fa1a 856 Pfam PF02706 Chain length determinant protein 59 203 6.6E-5 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RB2464 5ab7709697bda459f2eb8f8287e7fa1a 856 Gene3D G3DSA:3.40.50.300 610 797 1.8E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6305 d3f5c4ac5f2bbbccaf33a5fd52e0b15b 437 SUPERFAMILY SSF53448 67 322 5.16E-42 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6305 d3f5c4ac5f2bbbccaf33a5fd52e0b15b 437 Pfam PF00535 Glycosyl transferase family 2 71 236 8.9E-26 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB6305 d3f5c4ac5f2bbbccaf33a5fd52e0b15b 437 Gene3D G3DSA:3.90.550.10 69 244 1.5E-20 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB3718 00e31602fef35d4ec3b7c45a4eedf718 535 Pfam PF07690 Major Facilitator Superfamily 18 370 2.2E-22 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB3718 00e31602fef35d4ec3b7c45a4eedf718 535 SUPERFAMILY SSF103473 7 374 2.49E-29 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB3718 00e31602fef35d4ec3b7c45a4eedf718 535 Gene3D G3DSA:1.20.1250.20 12 206 2.2E-15 T 11-11-2016 RB3718 00e31602fef35d4ec3b7c45a4eedf718 535 Gene3D G3DSA:1.20.1250.20 233 374 1.6E-6 T 11-11-2016 RB2605 37119c60be8811e45312064e0e090f3d 1606 Gene3D G3DSA:3.40.50.1110 63 264 2.3E-19 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB2605 37119c60be8811e45312064e0e090f3d 1606 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 1336 1417 5.0E-43 T 11-11-2016 RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF49503 1300 1421 2.27E-30 T 11-11-2016 IPR008972 Cupredoxin RB2605 37119c60be8811e45312064e0e090f3d 1606 Gene3D G3DSA:2.120.10.30 393 758 3.7E-23 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF52266 74 265 4.5E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF63829 632 731 9.81E-14 T 11-11-2016 RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF63829 409 598 9.81E-14 T 11-11-2016 RB2605 37119c60be8811e45312064e0e090f3d 1606 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 1305 1421 4.7E-9 T 11-11-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 RB2605 37119c60be8811e45312064e0e090f3d 1606 Gene3D G3DSA:2.60.40.420 1304 1422 1.6E-29 T 11-11-2016 IPR008972 Cupredoxin RB2605 37119c60be8811e45312064e0e090f3d 1606 Pfam PF00034 Cytochrome c 1468 1555 4.1E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2605 37119c60be8811e45312064e0e090f3d 1606 Gene3D G3DSA:1.10.760.10 1580 1603 1.4E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2605 37119c60be8811e45312064e0e090f3d 1606 Gene3D G3DSA:1.10.760.10 1470 1527 1.4E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2605 37119c60be8811e45312064e0e090f3d 1606 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 112 256 5.2E-9 T 11-11-2016 IPR001087 GDSL lipase/esterase GO:0016788 RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF48371 843 946 1.01E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF48371 1038 1122 1.01E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF48371 1167 1218 1.01E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB2605 37119c60be8811e45312064e0e090f3d 1606 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 1400 1415 - T 11-11-2016 IPR028871 Blue (type 1) copper protein, binding site RB2605 37119c60be8811e45312064e0e090f3d 1606 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 398 756 6.3E-60 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF46626 1468 1546 5.49E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2605 37119c60be8811e45312064e0e090f3d 1606 SUPERFAMILY SSF46626 1579 1603 5.49E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2605 37119c60be8811e45312064e0e090f3d 1606 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1469 1602 2.0E-23 T 11-11-2016 IPR013427 Haem-binding domain, putative RB8291 706816c0924af379a1635f445be84c15 282 Pfam PF00731 AIR carboxylase 141 276 1.9E-11 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB8291 706816c0924af379a1635f445be84c15 282 SMART SM01001 139 271 5.4E-19 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB8291 706816c0924af379a1635f445be84c15 282 SUPERFAMILY SSF52255 139 273 8.24E-20 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB8291 706816c0924af379a1635f445be84c15 282 Gene3D G3DSA:3.40.50.7700 139 275 3.0E-17 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RB2557 82ac20c1bc282602c45dffdae0e4481f 61 SUPERFAMILY SSF143422 2 61 2.62E-14 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB2557 82ac20c1bc282602c45dffdae0e4481f 61 Gene3D G3DSA:3.30.70.1290 3 61 1.9E-10 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB2557 82ac20c1bc282602c45dffdae0e4481f 61 Pfam PF01797 Transposase IS200 like 6 61 4.8E-11 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB2752 029e1fcf5665cba4cf4848ab053f68f6 317 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 53 295 36.624 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RB2752 029e1fcf5665cba4cf4848ab053f68f6 317 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 62 295 6.7E-76 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RB2752 029e1fcf5665cba4cf4848ab053f68f6 317 Gene3D G3DSA:3.40.50.150 61 290 3.8E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2752 029e1fcf5665cba4cf4848ab053f68f6 317 Pfam PF01209 ubiE/COQ5 methyltransferase family 59 295 5.6E-70 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RB2752 029e1fcf5665cba4cf4848ab053f68f6 317 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 73 88 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RB2752 029e1fcf5665cba4cf4848ab053f68f6 317 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 202 216 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RB2752 029e1fcf5665cba4cf4848ab053f68f6 317 SUPERFAMILY SSF53335 51 296 2.46E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2884 8351f3fb271aa43c433e4358a9bdf874 356 SUPERFAMILY SSF51735 13 344 1.03E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2884 8351f3fb271aa43c433e4358a9bdf874 356 Gene3D G3DSA:3.90.25.10 220 351 4.1E-17 T 11-11-2016 RB2884 8351f3fb271aa43c433e4358a9bdf874 356 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 250 5.8E-19 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB2884 8351f3fb271aa43c433e4358a9bdf874 356 Gene3D G3DSA:3.40.50.720 13 219 4.9E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 TIGRFAM TIGR00836 amt: ammonium transporter 80 487 5.8E-122 T 11-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 PRINTS PR00342 Rhesus blood group protein signature 249 264 5.5E-6 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 PRINTS PR00342 Rhesus blood group protein signature 355 368 5.5E-6 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 PRINTS PR00342 Rhesus blood group protein signature 286 304 5.5E-6 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 PRINTS PR00342 Rhesus blood group protein signature 120 137 5.5E-6 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 Gene3D G3DSA:1.10.3430.10 78 468 3.5E-113 T 11-11-2016 IPR029020 Ammonium/urea transporter RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 SUPERFAMILY SSF111352 78 468 7.59E-107 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 Pfam PF00909 Ammonium Transporter Family 83 487 1.1E-116 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RB5003 f52a18f0f400c5ed76cef1f312e6cd6b 498 ProSitePatterns PS01219 Ammonium transporters signature. 242 267 - T 11-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RB10757 b5a0756d05f3deb84bf6c7beffb3eea0 1060 SUPERFAMILY SSF48371 706 897 1.33E-10 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB10757 b5a0756d05f3deb84bf6c7beffb3eea0 1060 SUPERFAMILY SSF48371 459 596 1.33E-10 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB10757 b5a0756d05f3deb84bf6c7beffb3eea0 1060 SUPERFAMILY SSF48371 44 387 1.33E-10 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB10757 b5a0756d05f3deb84bf6c7beffb3eea0 1060 Gene3D G3DSA:1.25.10.10 471 595 5.8E-6 T 11-11-2016 IPR011989 Armadillo-like helical RB10757 b5a0756d05f3deb84bf6c7beffb3eea0 1060 Gene3D G3DSA:1.25.10.10 739 862 5.8E-6 T 11-11-2016 IPR011989 Armadillo-like helical RB2479 59909d278f12f42449fb0c001023e456 273 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 67 220 6.9E-30 T 11-11-2016 IPR006342 Methyltransferase FkbM RB2479 59909d278f12f42449fb0c001023e456 273 SUPERFAMILY SSF53335 36 244 1.02E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2479 59909d278f12f42449fb0c001023e456 273 Gene3D G3DSA:3.40.50.150 54 248 2.7E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2479 59909d278f12f42449fb0c001023e456 273 Pfam PF05050 Methyltransferase FkbM domain 70 243 2.3E-24 T 11-11-2016 IPR006342 Methyltransferase FkbM RB4053 c4510d5ef647c0311ffd71630fcd0fa6 434 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 21 67 3.1E-6 T 11-11-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal RB4053 c4510d5ef647c0311ffd71630fcd0fa6 434 SMART SM00327 182 429 3.6E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4053 c4510d5ef647c0311ffd71630fcd0fa6 434 Gene3D G3DSA:3.40.50.410 181 195 1.3E-21 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4053 c4510d5ef647c0311ffd71630fcd0fa6 434 Gene3D G3DSA:3.40.50.410 267 427 1.3E-21 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4053 c4510d5ef647c0311ffd71630fcd0fa6 434 SUPERFAMILY SSF53300 268 426 6.06E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4053 c4510d5ef647c0311ffd71630fcd0fa6 434 SUPERFAMILY SSF53300 183 195 6.06E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4053 c4510d5ef647c0311ffd71630fcd0fa6 434 Pfam PF00092 von Willebrand factor type A domain 274 419 1.8E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB3842 7ac812bc3639e7a1610bb27e7efa566f 708 SUPERFAMILY SSF82171 89 433 4.84E-34 T 11-11-2016 RB3842 7ac812bc3639e7a1610bb27e7efa566f 708 Gene3D G3DSA:2.140.10.30 163 436 4.4E-57 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 RB3842 7ac812bc3639e7a1610bb27e7efa566f 708 Gene3D G3DSA:3.40.50.1820 442 696 1.2E-60 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3842 7ac812bc3639e7a1610bb27e7efa566f 708 Pfam PF00326 Prolyl oligopeptidase family 500 696 1.4E-29 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB3842 7ac812bc3639e7a1610bb27e7efa566f 708 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 155 408 7.4E-38 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 RB3842 7ac812bc3639e7a1610bb27e7efa566f 708 Gene3D G3DSA:2.120.10.60 89 162 2.7E-7 T 11-11-2016 RB3842 7ac812bc3639e7a1610bb27e7efa566f 708 SUPERFAMILY SSF53474 442 696 7.56E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6746 ed1e6076861d71dbc5834861effd0224 406 Pfam PF13847 Methyltransferase domain 101 268 6.1E-22 T 11-11-2016 IPR025714 Methyltransferase domain RB6746 ed1e6076861d71dbc5834861effd0224 406 Gene3D G3DSA:3.40.50.150 208 303 5.3E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6746 ed1e6076861d71dbc5834861effd0224 406 Gene3D G3DSA:3.40.50.150 98 170 5.3E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6746 ed1e6076861d71dbc5834861effd0224 406 SUPERFAMILY SSF53335 63 168 2.26E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6746 ed1e6076861d71dbc5834861effd0224 406 SUPERFAMILY SSF53335 204 322 2.26E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6588 cc859ee08f2b66a6ca503eb815da9276 279 PIRSF PIRSF000477 1 273 2.9E-95 T 11-11-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RB6588 cc859ee08f2b66a6ca503eb815da9276 279 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 270 5.1E-89 T 11-11-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RB6588 cc859ee08f2b66a6ca503eb815da9276 279 SUPERFAMILY SSF53167 5 270 1.44E-84 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB6588 cc859ee08f2b66a6ca503eb815da9276 279 Pfam PF01048 Phosphorylase superfamily 24 270 2.2E-45 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB6588 cc859ee08f2b66a6ca503eb815da9276 279 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 11-11-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 RB6588 cc859ee08f2b66a6ca503eb815da9276 279 Gene3D G3DSA:3.40.50.1580 3 272 3.7E-94 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB6588 cc859ee08f2b66a6ca503eb815da9276 279 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 25 270 3.9E-92 T 11-11-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RB372 e2fd75a56de4c3fe6b4e9c71b57906f9 371 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 177 356 8.1E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB372 e2fd75a56de4c3fe6b4e9c71b57906f9 371 Gene3D G3DSA:1.10.3720.10 152 361 1.2E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB372 e2fd75a56de4c3fe6b4e9c71b57906f9 371 SUPERFAMILY SSF161098 153 355 2.09E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7437 b7a220f636e0f8613795b0aa8edcfcf2 239 SUPERFAMILY SSF46785 44 111 7.44E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7437 b7a220f636e0f8613795b0aa8edcfcf2 239 Gene3D G3DSA:2.10.109.10 131 237 7.1E-13 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RB7437 b7a220f636e0f8613795b0aa8edcfcf2 239 Pfam PF01726 LexA DNA binding domain 44 106 1.4E-23 T 11-11-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RB7437 b7a220f636e0f8613795b0aa8edcfcf2 239 Gene3D G3DSA:1.10.10.10 44 110 1.0E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7437 b7a220f636e0f8613795b0aa8edcfcf2 239 TIGRFAM TIGR00498 lexA: repressor LexA 44 237 3.4E-40 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RB7437 b7a220f636e0f8613795b0aa8edcfcf2 239 SUPERFAMILY SSF51306 136 236 1.74E-13 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RB6269 d2ccac80c8c4633f49ecee38c25e6f79 405 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 35 356 1.0E-133 T 11-11-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RB6269 d2ccac80c8c4633f49ecee38c25e6f79 405 Gene3D G3DSA:3.90.25.10 203 357 6.1E-49 T 11-11-2016 RB6269 d2ccac80c8c4633f49ecee38c25e6f79 405 SUPERFAMILY SSF51735 34 355 5.97E-99 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6269 d2ccac80c8c4633f49ecee38c25e6f79 405 Pfam PF01370 NAD dependent epimerase/dehydratase family 36 283 6.6E-59 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB6269 d2ccac80c8c4633f49ecee38c25e6f79 405 Gene3D G3DSA:3.40.50.720 33 202 4.0E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5263 bce1a1904c62b7f716889c0dedbf6151 315 Gene3D G3DSA:3.60.21.10 54 307 1.7E-39 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5263 bce1a1904c62b7f716889c0dedbf6151 315 SUPERFAMILY SSF56300 55 309 3.96E-46 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5263 bce1a1904c62b7f716889c0dedbf6151 315 Pfam PF00149 Calcineurin-like phosphoesterase 60 262 1.0E-12 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB11983 f1f0dbfa747a9569cafae865a1bdcced 126 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 36 109 5.8E-33 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RB11983 f1f0dbfa747a9569cafae865a1bdcced 126 SUPERFAMILY SSF141734 18 122 2.88E-45 T 11-11-2016 RB11983 f1f0dbfa747a9569cafae865a1bdcced 126 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 59 112 3.0E-26 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RB11983 f1f0dbfa747a9569cafae865a1bdcced 126 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 10 113 30.356 T 11-11-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RB392 956623e679ab16c91b4227a38c9d65df 218 Gene3D G3DSA:3.40.50.1000 119 214 1.6E-30 T 11-11-2016 IPR023214 HAD-like domain RB392 956623e679ab16c91b4227a38c9d65df 218 Gene3D G3DSA:3.40.50.1000 31 48 1.6E-30 T 11-11-2016 IPR023214 HAD-like domain RB392 956623e679ab16c91b4227a38c9d65df 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 37 212 1.3E-26 T 11-11-2016 IPR023214 HAD-like domain RB392 956623e679ab16c91b4227a38c9d65df 218 SUPERFAMILY SSF56784 33 214 1.93E-44 T 11-11-2016 IPR023214 HAD-like domain RB392 956623e679ab16c91b4227a38c9d65df 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 176 196 4.0E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB392 956623e679ab16c91b4227a38c9d65df 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 158 174 4.0E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB392 956623e679ab16c91b4227a38c9d65df 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 34 45 4.0E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB392 956623e679ab16c91b4227a38c9d65df 218 Gene3D G3DSA:1.10.150.240 50 96 3.4E-9 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RB392 956623e679ab16c91b4227a38c9d65df 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 153 211 1.3E-12 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB10338 ee1c6817c7606ad41bd889b0a25951de 486 SUPERFAMILY SSF53756 199 459 3.77E-23 T 11-11-2016 RB10338 ee1c6817c7606ad41bd889b0a25951de 486 Pfam PF13414 TPR repeat 50 82 1.3E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10338 ee1c6817c7606ad41bd889b0a25951de 486 SUPERFAMILY SSF48452 8 166 1.57E-32 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10338 ee1c6817c7606ad41bd889b0a25951de 486 Gene3D G3DSA:1.25.40.10 7 158 1.5E-35 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10338 ee1c6817c7606ad41bd889b0a25951de 486 SMART SM00028 106 139 1.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10338 ee1c6817c7606ad41bd889b0a25951de 486 SMART SM00028 72 105 7.2E-6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10338 ee1c6817c7606ad41bd889b0a25951de 486 SMART SM00028 38 71 8.7E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10338 ee1c6817c7606ad41bd889b0a25951de 486 Gene3D G3DSA:3.40.50.2000 323 455 1.7E-10 T 11-11-2016 RB2078 1b4efb31b2e190fd1e11c65a895a9bb9 311 Pfam PF05544 Proline racemase 9 309 1.5E-80 T 11-11-2016 IPR008794 Proline racemase family RB2078 1b4efb31b2e190fd1e11c65a895a9bb9 311 Gene3D G3DSA:3.10.310.10 147 307 1.6E-46 T 11-11-2016 RB2078 1b4efb31b2e190fd1e11c65a895a9bb9 311 SUPERFAMILY SSF54506 1 310 1.57E-85 T 11-11-2016 RB2078 1b4efb31b2e190fd1e11c65a895a9bb9 311 Gene3D G3DSA:3.10.310.10 5 146 1.7E-40 T 11-11-2016 RB2078 1b4efb31b2e190fd1e11c65a895a9bb9 311 PIRSF PIRSF029792 1 311 2.5E-78 T 11-11-2016 IPR008794 Proline racemase family RB8383 b918b21d3037e2ede2c684e5d05ac493 830 PIRSF PIRSF000460 12 830 5.0E-217 T 11-11-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RB8383 b918b21d3037e2ede2c684e5d05ac493 830 SUPERFAMILY SSF53756 18 828 0.0 T 11-11-2016 RB8383 b918b21d3037e2ede2c684e5d05ac493 830 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 671 683 - T 11-11-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RB8383 b918b21d3037e2ede2c684e5d05ac493 830 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 37 826 0.0 T 11-11-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RB8383 b918b21d3037e2ede2c684e5d05ac493 830 Pfam PF00343 Carbohydrate phosphorylase 115 826 0.0 T 11-11-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RB8383 b918b21d3037e2ede2c684e5d05ac493 830 Gene3D G3DSA:3.40.50.2000 22 496 2.3E-199 T 11-11-2016 RB8383 b918b21d3037e2ede2c684e5d05ac493 830 Gene3D G3DSA:3.40.50.2000 497 811 5.0E-124 T 11-11-2016 RB12664 9e5c647244efc3c78b915eca47146ed9 234 Gene3D G3DSA:3.90.10.10 127 181 2.0E-12 T 11-11-2016 RB12664 9e5c647244efc3c78b915eca47146ed9 234 Gene3D G3DSA:3.90.10.10 222 233 2.0E-12 T 11-11-2016 RB12664 9e5c647244efc3c78b915eca47146ed9 234 Pfam PF02085 Class III cytochrome C family 46 110 5.9E-6 T 11-11-2016 IPR020942 Class III cytochrome C GO:0009055|GO:0020037 RB12664 9e5c647244efc3c78b915eca47146ed9 234 Gene3D G3DSA:3.90.10.10 38 97 6.0E-9 T 11-11-2016 RB12664 9e5c647244efc3c78b915eca47146ed9 234 SUPERFAMILY SSF48695 3 200 6.89E-43 T 11-11-2016 IPR011031 Multihaem cytochrome RB7288 6c4db1755c6a6964cea4df0445dcb046 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 253 1.4E-22 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7288 6c4db1755c6a6964cea4df0445dcb046 271 Gene3D G3DSA:1.10.3720.10 20 263 2.6E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7288 6c4db1755c6a6964cea4df0445dcb046 271 SUPERFAMILY SSF161098 66 251 3.4E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB1192 8aa6612cbaf42a79ef66da228d548c05 348 Pfam PF00589 Phage integrase family 153 326 1.2E-36 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB1192 8aa6612cbaf42a79ef66da228d548c05 348 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 55 137 3.1E-19 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB1192 8aa6612cbaf42a79ef66da228d548c05 348 SUPERFAMILY SSF56349 63 330 3.53E-48 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB1192 8aa6612cbaf42a79ef66da228d548c05 348 Gene3D G3DSA:1.10.443.10 153 330 4.9E-45 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB5557 c8075451e6987eff7f9de8125c9d8abb 414 Gene3D G3DSA:2.140.10.10 3 400 3.5E-51 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB5557 c8075451e6987eff7f9de8125c9d8abb 414 SMART SM00564 343 385 170.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5557 c8075451e6987eff7f9de8125c9d8abb 414 SMART SM00564 218 249 14.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5557 c8075451e6987eff7f9de8125c9d8abb 414 SMART SM00564 118 153 350.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5557 c8075451e6987eff7f9de8125c9d8abb 414 SMART SM00564 170 205 0.84 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB5557 c8075451e6987eff7f9de8125c9d8abb 414 Pfam PF13360 PQQ-like domain 169 331 2.7E-15 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB5557 c8075451e6987eff7f9de8125c9d8abb 414 Pfam PF13360 PQQ-like domain 39 156 1.0E-6 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB5557 c8075451e6987eff7f9de8125c9d8abb 414 SUPERFAMILY SSF50998 14 396 1.83E-51 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB12038 04b48333a4c2b81e6b2106c19e0882fe 377 SUPERFAMILY SSF55347 136 300 1.06E-34 T 11-11-2016 RB12038 04b48333a4c2b81e6b2106c19e0882fe 377 SUPERFAMILY SSF51735 2 163 5.49E-53 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12038 04b48333a4c2b81e6b2106c19e0882fe 377 Gene3D G3DSA:3.40.50.720 1 150 1.3E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12038 04b48333a4c2b81e6b2106c19e0882fe 377 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 217 6.8E-6 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RB12038 04b48333a4c2b81e6b2106c19e0882fe 377 Gene3D G3DSA:3.30.360.10 151 280 3.6E-42 T 11-11-2016 RB12038 04b48333a4c2b81e6b2106c19e0882fe 377 Gene3D G3DSA:3.30.360.10 328 376 3.6E-42 T 11-11-2016 RB12038 04b48333a4c2b81e6b2106c19e0882fe 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 128 1.3E-26 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB1488 726ca185caf01dfe826c058d2d5f3644 587 Gene3D G3DSA:3.50.50.60 384 506 7.9E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 SUPERFAMILY SSF51905 267 586 2.81E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 267 569 2.6E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 Gene3D G3DSA:3.50.50.60 507 586 2.5E-37 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 Gene3D G3DSA:3.50.50.60 265 383 2.5E-37 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 Gene3D G3DSA:2.60.120.10 52 173 2.2E-16 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 369 387 4.8E-25 T 11-11-2016 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 288 4.8E-25 T 11-11-2016 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 412 430 4.8E-25 T 11-11-2016 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 539 561 4.8E-25 T 11-11-2016 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 514 4.8E-25 T 11-11-2016 RB1488 726ca185caf01dfe826c058d2d5f3644 587 SUPERFAMILY SSF51206 52 177 4.19E-19 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 408 432 3.5E-35 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 549 567 3.5E-35 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 370 378 3.5E-35 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 462 478 3.5E-35 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 290 3.5E-35 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 301 316 3.5E-35 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB1488 726ca185caf01dfe826c058d2d5f3644 587 SMART SM00100 54 171 1.7E-9 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain RB1488 726ca185caf01dfe826c058d2d5f3644 587 Pfam PF00027 Cyclic nucleotide-binding domain 73 156 1.8E-9 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain RB5711 c437df374694bd153cf35f2260df329d 651 Pfam PF07196 Flagellin hook IN motif 343 386 1.6E-5 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 RB5711 c437df374694bd153cf35f2260df329d 651 Pfam PF00700 Bacterial flagellin C-terminal helical region 571 651 1.5E-5 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB5711 c437df374694bd153cf35f2260df329d 651 Gene3D G3DSA:1.20.1330.10 64 193 1.5E-13 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB5711 c437df374694bd153cf35f2260df329d 651 Gene3D G3DSA:1.20.1330.10 556 608 1.5E-13 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB5711 c437df374694bd153cf35f2260df329d 651 SUPERFAMILY SSF64518 13 273 1.03E-42 T 11-11-2016 RB5711 c437df374694bd153cf35f2260df329d 651 SUPERFAMILY SSF64518 536 651 1.03E-42 T 11-11-2016 RB5711 c437df374694bd153cf35f2260df329d 651 Pfam PF00669 Bacterial flagellin N-terminal helical region 18 136 1.2E-11 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB9957 2d5b34eabf44308dccdce03626bc21c7 829 Pfam PF07631 Protein of unknown function (DUF1592) 465 590 1.9E-28 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB9957 2d5b34eabf44308dccdce03626bc21c7 829 Pfam PF07691 PA14 domain 181 325 1.7E-31 T 11-11-2016 IPR011658 PA14 domain RB9957 2d5b34eabf44308dccdce03626bc21c7 829 SUPERFAMILY SSF56988 183 332 1.22E-17 T 11-11-2016 RB9957 2d5b34eabf44308dccdce03626bc21c7 829 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 63 129 1.5E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9957 2d5b34eabf44308dccdce03626bc21c7 829 SUPERFAMILY SSF46626 28 132 1.06E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9957 2d5b34eabf44308dccdce03626bc21c7 829 Gene3D G3DSA:3.90.182.10 180 362 1.5E-23 T 11-11-2016 IPR011658 PA14 domain RB9957 2d5b34eabf44308dccdce03626bc21c7 829 Pfam PF07627 Protein of unknown function (DUF1588) 624 719 4.4E-28 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB9957 2d5b34eabf44308dccdce03626bc21c7 829 SMART SM00758 181 326 2.5E-37 T 11-11-2016 IPR011658 PA14 domain RB9957 2d5b34eabf44308dccdce03626bc21c7 829 Gene3D G3DSA:1.10.760.10 30 136 1.1E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4116 de24e3644fd4fc0fa75a53eb8321ae39 1127 Gene3D G3DSA:3.40.30.10 1032 1112 9.8E-4 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4116 de24e3644fd4fc0fa75a53eb8321ae39 1127 Gene3D G3DSA:2.60.40.1120 713 792 4.3E-6 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB4116 de24e3644fd4fc0fa75a53eb8321ae39 1127 Gene3D G3DSA:2.60.40.1120 434 543 2.0E-4 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB4116 de24e3644fd4fc0fa75a53eb8321ae39 1127 Gene3D G3DSA:2.60.40.1120 803 891 2.6E-6 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB4116 de24e3644fd4fc0fa75a53eb8321ae39 1127 Gene3D G3DSA:3.30.2010.10 199 281 1.6E-6 T 11-11-2016 RB4116 de24e3644fd4fc0fa75a53eb8321ae39 1127 SUPERFAMILY SSF49464 803 891 1.06E-5 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain RB4116 de24e3644fd4fc0fa75a53eb8321ae39 1127 Pfam PF05569 BlaR1 peptidase M56 165 359 3.7E-29 T 11-11-2016 IPR008756 Peptidase M56 RB3171 42b75933c0554a956f000934bc466919 156 SUPERFAMILY SSF48452 53 129 1.77E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3171 42b75933c0554a956f000934bc466919 156 Gene3D G3DSA:1.25.40.10 54 132 2.0E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Pfam PF14520 Helix-hairpin-helix domain 326 375 2.4E-6 T 11-11-2016 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 SUPERFAMILY SSF54814 248 311 8.5E-12 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Gene3D G3DSA:3.30.1480.10 4 59 3.2E-13 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Gene3D G3DSA:3.30.1480.10 69 93 4.1E-8 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 66 311 4.2E-91 T 11-11-2016 IPR010213 Transcription termination factor NusA GO:0003723 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 SMART SM00322 199 272 0.35 T 11-11-2016 IPR004087 K Homology domain GO:0003676 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 SMART SM00322 273 339 1.6 T 11-11-2016 IPR004087 K Homology domain GO:0003676 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Gene3D G3DSA:2.40.50.140 98 167 1.1E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 SUPERFAMILY SSF50249 101 168 1.08E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Gene3D G3DSA:1.10.150.20 314 376 2.4E-11 T 11-11-2016 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 SUPERFAMILY SSF69705 4 91 1.57E-21 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 SUPERFAMILY SSF47794 322 376 3.14E-9 T 11-11-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Gene3D G3DSA:3.30.300.20 248 313 7.3E-25 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Gene3D G3DSA:3.30.300.20 168 246 2.6E-32 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 SMART SM00316 102 169 7.4E-6 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Pfam PF13184 NusA-like KH domain 199 266 1.6E-24 T 11-11-2016 IPR025249 KH domain, NusA-like GO:0003723 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 SUPERFAMILY SSF54814 169 246 3.14E-27 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 3 391 26.792 T 11-11-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Pfam PF08529 NusA N-terminal domain 69 93 4.0E-6 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RB5507 a339027c5da11a4b0bd7e733c1e1d7b0 498 Pfam PF08529 NusA N-terminal domain 6 58 4.2E-10 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RB244 cd6eb50ce223838c01cd1d08fb9647b9 334 Gene3D G3DSA:3.30.700.10 32 89 2.4E-6 T 11-11-2016 RB244 cd6eb50ce223838c01cd1d08fb9647b9 334 Pfam PF13633 Prokaryotic N-terminal methylation site 30 55 1.6E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB244 cd6eb50ce223838c01cd1d08fb9647b9 334 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 30 51 3.9E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB244 cd6eb50ce223838c01cd1d08fb9647b9 334 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 30 50 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB244 cd6eb50ce223838c01cd1d08fb9647b9 334 SUPERFAMILY SSF54523 32 148 2.9E-21 T 11-11-2016 RB244 cd6eb50ce223838c01cd1d08fb9647b9 334 Pfam PF07596 Protein of unknown function (DUF1559) 56 315 3.6E-54 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB4925 f8db4095a7806d6049aaf3e53e189138 297 SUPERFAMILY SSF69065 65 205 3.66E-42 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RB4925 f8db4095a7806d6049aaf3e53e189138 297 SMART SM00535 80 210 2.3E-38 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RB4925 f8db4095a7806d6049aaf3e53e189138 297 SUPERFAMILY SSF54768 171 284 4.09E-23 T 11-11-2016 RB4925 f8db4095a7806d6049aaf3e53e189138 297 Gene3D G3DSA:1.10.1520.10 64 202 5.1E-41 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RB4925 f8db4095a7806d6049aaf3e53e189138 297 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 69 282 4.8E-60 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 RB4925 f8db4095a7806d6049aaf3e53e189138 297 Gene3D G3DSA:3.30.160.20 216 284 4.5E-21 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain RB4925 f8db4095a7806d6049aaf3e53e189138 297 SMART SM00358 217 284 4.6E-19 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain RB4925 f8db4095a7806d6049aaf3e53e189138 297 Pfam PF00035 Double-stranded RNA binding motif 218 283 3.6E-16 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain RB4925 f8db4095a7806d6049aaf3e53e189138 297 ProSitePatterns PS00517 Ribonuclease III family signature. 100 108 - T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RB4925 f8db4095a7806d6049aaf3e53e189138 297 Hamap MF_00104 Ribonuclease 3 [rnc]. 68 280 26.993 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 RB4925 f8db4095a7806d6049aaf3e53e189138 297 Pfam PF14622 Ribonuclease-III-like 80 199 5.6E-24 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RB12881 48e4de308161aa0843f3d09f5ce2d695 137 Pfam PF00072 Response regulator receiver domain 14 125 2.3E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12881 48e4de308161aa0843f3d09f5ce2d695 137 SUPERFAMILY SSF52172 10 131 7.26E-26 T 11-11-2016 IPR011006 CheY-like superfamily RB12881 48e4de308161aa0843f3d09f5ce2d695 137 SMART SM00448 12 125 4.6E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12881 48e4de308161aa0843f3d09f5ce2d695 137 Gene3D G3DSA:3.40.50.2300 10 132 1.5E-26 T 11-11-2016 RB3508 6c079bf3227bab4fd5e51e9559aa18a6 293 SUPERFAMILY SSF51735 1 287 1.34E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3508 6c079bf3227bab4fd5e51e9559aa18a6 293 Gene3D G3DSA:3.40.50.720 1 225 3.3E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3508 6c079bf3227bab4fd5e51e9559aa18a6 293 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 201 1.2E-20 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB11660 f9e678e25614b4ba2f4f107444896fb4 748 SUPERFAMILY SSF50998 31 408 1.7E-45 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB11660 f9e678e25614b4ba2f4f107444896fb4 748 Pfam PF13360 PQQ-like domain 102 367 5.8E-23 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB11660 f9e678e25614b4ba2f4f107444896fb4 748 SMART SM00564 244 276 11.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11660 f9e678e25614b4ba2f4f107444896fb4 748 SMART SM00564 381 412 430.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11660 f9e678e25614b4ba2f4f107444896fb4 748 SMART SM00564 187 228 74.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11660 f9e678e25614b4ba2f4f107444896fb4 748 Gene3D G3DSA:2.140.10.10 12 447 7.0E-55 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB12061 d9d1700300cd419db5387578c8d2f7de 551 Gene3D G3DSA:3.40.50.300 1 285 2.4E-129 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12061 d9d1700300cd419db5387578c8d2f7de 551 Pfam PF00117 Glutamine amidotransferase class-I 304 528 4.4E-56 T 11-11-2016 IPR017926 Glutamine amidotransferase RB12061 d9d1700300cd419db5387578c8d2f7de 551 SUPERFAMILY SSF52317 290 535 4.59E-80 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB12061 d9d1700300cd419db5387578c8d2f7de 551 TIGRFAM TIGR00337 PyrG: CTP synthase 1 528 1.3E-241 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RB12061 d9d1700300cd419db5387578c8d2f7de 551 SUPERFAMILY SSF52540 1 268 3.19E-118 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12061 d9d1700300cd419db5387578c8d2f7de 551 Pfam PF06418 CTP synthase N-terminus 3 267 9.0E-123 T 11-11-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RB12061 d9d1700300cd419db5387578c8d2f7de 551 Hamap MF_01227 CTP synthase [pyrG]. 2 533 50.698 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RB12061 d9d1700300cd419db5387578c8d2f7de 551 Gene3D G3DSA:3.40.50.880 290 535 3.2E-99 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8415 ffb10e1c558457a27c69a6018619fead 208 SUPERFAMILY SSF55729 31 139 9.63E-11 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB446 394acc9161fcbbc41c62afe4c10ba973 130 SUPERFAMILY SSF56300 2 116 5.22E-18 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB446 394acc9161fcbbc41c62afe4c10ba973 130 Gene3D G3DSA:3.60.21.10 33 118 1.5E-6 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB3349 fb49a87f7d1cc70536787f9569b94ba6 896 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 428 833 5.7E-59 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB3349 fb49a87f7d1cc70536787f9569b94ba6 896 Gene3D G3DSA:2.120.10.80 115 391 2.1E-30 T 11-11-2016 IPR015915 Kelch-type beta propeller GO:0005515 RB3349 fb49a87f7d1cc70536787f9569b94ba6 896 Pfam PF00474 Sodium:solute symporter family 428 833 1.9E-38 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB3349 fb49a87f7d1cc70536787f9569b94ba6 896 Pfam PF13415 Galactose oxidase, central domain 192 246 2.3E-5 T 11-11-2016 RB3349 fb49a87f7d1cc70536787f9569b94ba6 896 SUPERFAMILY SSF117281 116 390 9.68E-32 T 11-11-2016 RB6663 f972d0afef1dd9e41ee361fe794f0391 461 SUPERFAMILY SSF103473 28 222 3.4E-15 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB6663 f972d0afef1dd9e41ee361fe794f0391 461 Gene3D G3DSA:1.20.1250.20 38 232 4.9E-10 T 11-11-2016 RB6663 f972d0afef1dd9e41ee361fe794f0391 461 Gene3D G3DSA:1.20.1250.20 247 424 9.0E-12 T 11-11-2016 RB6663 f972d0afef1dd9e41ee361fe794f0391 461 SUPERFAMILY SSF103473 247 422 1.7E-13 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB6070 dde2dd9a427ac910e56d56a6d10e935c 201 Pfam PF14279 HNH endonuclease 114 168 1.3E-17 T 11-11-2016 IPR029471 HNH endonuclease 5 RB6070 dde2dd9a427ac910e56d56a6d10e935c 201 SMART SM00507 101 154 2.0E-11 T 11-11-2016 IPR003615 HNH nuclease RB6761 4f19014b80580d5f880efe82e59dbf80 198 Pfam PF00578 AhpC/TSA family 42 178 9.1E-23 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB6761 4f19014b80580d5f880efe82e59dbf80 198 Gene3D G3DSA:3.40.30.10 30 193 1.2E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6761 4f19014b80580d5f880efe82e59dbf80 198 SUPERFAMILY SSF52833 40 198 6.48E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold RB1225 e28b0db3ac2a4f5e725c960d9cabff2b 834 Gene3D G3DSA:3.40.50.1820 580 834 3.6E-66 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1225 e28b0db3ac2a4f5e725c960d9cabff2b 834 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 145 529 1.9E-96 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 RB1225 e28b0db3ac2a4f5e725c960d9cabff2b 834 Gene3D G3DSA:2.140.10.30 52 560 3.6E-101 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 RB1225 e28b0db3ac2a4f5e725c960d9cabff2b 834 SUPERFAMILY SSF82171 90 561 6.93E-49 T 11-11-2016 RB1225 e28b0db3ac2a4f5e725c960d9cabff2b 834 Pfam PF00326 Prolyl oligopeptidase family 637 834 2.2E-42 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB1225 e28b0db3ac2a4f5e725c960d9cabff2b 834 SUPERFAMILY SSF53474 579 834 3.51E-56 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1608 8b6f7b793a45a25c176d02466b652aa4 389 SUPERFAMILY SSF56601 30 361 6.61E-91 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like RB1608 8b6f7b793a45a25c176d02466b652aa4 389 Pfam PF00144 Beta-lactamase 32 360 1.3E-76 T 11-11-2016 IPR001466 Beta-lactamase-related RB1608 8b6f7b793a45a25c176d02466b652aa4 389 Gene3D G3DSA:3.40.710.10 12 362 5.8E-96 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like RB4638 eef035ece413a2068c9a66e4b2bdd632 498 ProSitePatterns PS00149 Sulfatases signature 2. 136 146 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB4638 eef035ece413a2068c9a66e4b2bdd632 498 Pfam PF00884 Sulfatase 32 356 1.4E-68 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB4638 eef035ece413a2068c9a66e4b2bdd632 498 Pfam PF16347 Domain of unknown function (DUF4976) 362 451 2.8E-11 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB4638 eef035ece413a2068c9a66e4b2bdd632 498 Gene3D G3DSA:3.30.1120.10 382 456 3.4E-17 T 11-11-2016 RB4638 eef035ece413a2068c9a66e4b2bdd632 498 Gene3D G3DSA:3.40.720.10 30 378 6.1E-107 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4638 eef035ece413a2068c9a66e4b2bdd632 498 SUPERFAMILY SSF53649 31 455 1.43E-125 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6227 40c73d965f9e630224156cebf5ab2bd0 587 Pfam PF00571 CBS domain 522 578 5.5E-5 T 11-11-2016 IPR000644 CBS domain RB6227 40c73d965f9e630224156cebf5ab2bd0 587 SUPERFAMILY SSF54631 448 578 9.57E-19 T 11-11-2016 RB6227 40c73d965f9e630224156cebf5ab2bd0 587 Pfam PF00999 Sodium/hydrogen exchanger family 39 403 2.2E-29 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RB6227 40c73d965f9e630224156cebf5ab2bd0 587 Gene3D G3DSA:3.10.580.10 453 579 3.3E-13 T 11-11-2016 RB10264 851261a7fd21ed960b6d6246ca1035b3 356 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 18 343 6.1E-128 T 11-11-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 RB10264 851261a7fd21ed960b6d6246ca1035b3 356 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 3 354 39.739 T 11-11-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 RB10264 851261a7fd21ed960b6d6246ca1035b3 356 Gene3D G3DSA:3.40.50.10470 164 347 2.0E-71 T 11-11-2016 RB10264 851261a7fd21ed960b6d6246ca1035b3 356 SUPERFAMILY SSF100950 17 347 6.63E-115 T 11-11-2016 RB10264 851261a7fd21ed960b6d6246ca1035b3 356 Pfam PF01008 Initiation factor 2 subunit family 52 342 9.4E-81 T 11-11-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 RB10264 851261a7fd21ed960b6d6246ca1035b3 356 Gene3D G3DSA:1.20.120.420 12 163 1.0E-48 T 11-11-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 RB10264 851261a7fd21ed960b6d6246ca1035b3 356 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 37 343 1.8E-114 T 11-11-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 SUPERFAMILY SSF50494 195 406 5.25E-55 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 Pfam PF13365 Trypsin-like peptidase domain 232 372 3.8E-33 T 11-11-2016 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 PRINTS PR00834 HtrA/DegQ protease family signature 262 282 1.8E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 PRINTS PR00834 HtrA/DegQ protease family signature 365 382 1.8E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 PRINTS PR00834 HtrA/DegQ protease family signature 241 253 1.8E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 PRINTS PR00834 HtrA/DegQ protease family signature 343 360 1.8E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 PRINTS PR00834 HtrA/DegQ protease family signature 302 326 1.8E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 PRINTS PR00834 HtrA/DegQ protease family signature 449 461 1.8E-43 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 Gene3D G3DSA:2.40.10.10 184 296 3.4E-28 T 11-11-2016 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 SMART SM00228 409 491 8.8E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 Gene3D G3DSA:2.40.10.10 297 410 1.4E-37 T 11-11-2016 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 SUPERFAMILY SSF50156 392 500 4.21E-19 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 Pfam PF13180 PDZ domain 410 500 1.1E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB12752 907a223d89e8a2e282adbfa10acfdb3d 509 Gene3D G3DSA:2.30.42.10 411 506 5.7E-21 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11799 53e4ef063f2881d542763209f5580d11 277 Gene3D G3DSA:3.90.132.10 210 244 3.9E-4 T 11-11-2016 RB11799 53e4ef063f2881d542763209f5580d11 277 Pfam PF07589 PEP-CTERM motif 248 271 6.1E-6 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB11799 53e4ef063f2881d542763209f5580d11 277 SUPERFAMILY SSF55486 121 241 4.15E-22 T 11-11-2016 RB11799 53e4ef063f2881d542763209f5580d11 277 SUPERFAMILY SSF55486 22 143 6.55E-7 T 11-11-2016 RB11799 53e4ef063f2881d542763209f5580d11 277 Pfam PF01457 Leishmanolysin 113 246 2.2E-5 T 11-11-2016 IPR001577 Peptidase M8, leishmanolysin GO:0004222|GO:0006508|GO:0007155|GO:0016020 RB11799 53e4ef063f2881d542763209f5580d11 277 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 249 273 8.4E-6 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB11799 53e4ef063f2881d542763209f5580d11 277 Gene3D G3DSA:3.40.390.10 29 142 1.4E-5 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB7359 d006dcf7f779672148207764900a5b1f 434 SUPERFAMILY SSF53720 24 433 1.57E-115 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB7359 d006dcf7f779672148207764900a5b1f 434 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 340 361 - T 11-11-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RB7359 d006dcf7f779672148207764900a5b1f 434 Gene3D G3DSA:3.40.605.10 391 433 1.0E-93 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB7359 d006dcf7f779672148207764900a5b1f 434 Gene3D G3DSA:3.40.605.10 18 241 1.0E-93 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB7359 d006dcf7f779672148207764900a5b1f 434 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 22 433 40.286 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RB7359 d006dcf7f779672148207764900a5b1f 434 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 30 423 1.5E-136 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RB7359 d006dcf7f779672148207764900a5b1f 434 PIRSF PIRSF000151 15 434 2.2E-181 T 11-11-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 RB7359 d006dcf7f779672148207764900a5b1f 434 Pfam PF00171 Aldehyde dehydrogenase family 22 304 4.7E-18 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB7359 d006dcf7f779672148207764900a5b1f 434 Gene3D G3DSA:3.40.309.10 243 390 1.5E-43 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB2487 133aed41b87c314cf0de5bcad50851b4 297 Gene3D G3DSA:3.40.50.150 74 247 3.1E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2487 133aed41b87c314cf0de5bcad50851b4 297 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 85 219 2.7E-23 T 11-11-2016 IPR006342 Methyltransferase FkbM RB2487 133aed41b87c314cf0de5bcad50851b4 297 Pfam PF05050 Methyltransferase FkbM domain 86 227 1.8E-11 T 11-11-2016 IPR006342 Methyltransferase FkbM RB2487 133aed41b87c314cf0de5bcad50851b4 297 SUPERFAMILY SSF53335 45 249 6.22E-40 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12861 1da1c61418ce9c8a12092c5a73539985 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 307 2.3E-33 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB12861 1da1c61418ce9c8a12092c5a73539985 309 SUPERFAMILY SSF161098 92 292 2.78E-18 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB12861 1da1c61418ce9c8a12092c5a73539985 309 Gene3D G3DSA:1.10.3720.10 91 300 4.7E-17 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB1161 08e858395f668d27d91422ec6a61ed50 636 SUPERFAMILY SSF48239 298 552 2.43E-29 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB1161 08e858395f668d27d91422ec6a61ed50 636 SUPERFAMILY SSF48239 596 631 2.43E-29 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB1161 08e858395f668d27d91422ec6a61ed50 636 Gene3D G3DSA:1.50.10.20 592 631 2.0E-25 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB1161 08e858395f668d27d91422ec6a61ed50 636 Gene3D G3DSA:1.50.10.20 299 548 2.0E-25 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB1161 08e858395f668d27d91422ec6a61ed50 636 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 314 331 0.57 T 11-11-2016 IPR001330 PFTB repeat GO:0003824 RB1161 08e858395f668d27d91422ec6a61ed50 636 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 592 604 0.56 T 11-11-2016 IPR001330 PFTB repeat GO:0003824 RB1161 08e858395f668d27d91422ec6a61ed50 636 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 388 407 0.4 T 11-11-2016 IPR001330 PFTB repeat GO:0003824 RB6201 e0d7ff16f490628975772dfd41a3b559 1181 Pfam PF00270 DEAD/DEAH box helicase 646 806 4.1E-18 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB6201 e0d7ff16f490628975772dfd41a3b559 1181 Gene3D G3DSA:3.40.50.300 628 827 2.4E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SMART SM00490 867 951 2.4E-16 T 11-11-2016 IPR001650 Helicase, C-terminal RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SUPERFAMILY SSF52540 113 400 3.07E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SMART SM01058 520 617 6.4E-32 T 11-11-2016 IPR003711 CarD-like/TRCF domain RB6201 e0d7ff16f490628975772dfd41a3b559 1181 Pfam PF00271 Helicase conserved C-terminal domain 846 950 2.4E-14 T 11-11-2016 IPR001650 Helicase, C-terminal RB6201 e0d7ff16f490628975772dfd41a3b559 1181 Gene3D G3DSA:3.40.50.300 835 997 1.1E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6201 e0d7ff16f490628975772dfd41a3b559 1181 Gene3D G3DSA:3.30.2060.10 230 307 1.5E-11 T 11-11-2016 RB6201 e0d7ff16f490628975772dfd41a3b559 1181 Pfam PF03461 TRCF domain 1045 1135 3.7E-21 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RB6201 e0d7ff16f490628975772dfd41a3b559 1181 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 129 1140 27.168 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SUPERFAMILY SSF52540 572 824 9.0E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SUPERFAMILY SSF52540 823 1030 7.02E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SMART SM00982 1044 1147 1.4E-29 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SUPERFAMILY SSF143517 1031 1137 7.45E-28 T 11-11-2016 RB6201 e0d7ff16f490628975772dfd41a3b559 1181 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 246 1117 8.2E-303 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RB6201 e0d7ff16f490628975772dfd41a3b559 1181 Pfam PF02559 CarD-like/TRCF domain 521 615 7.9E-19 T 11-11-2016 IPR003711 CarD-like/TRCF domain RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SUPERFAMILY SSF52540 437 511 2.39E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SMART SM00487 641 831 2.6E-30 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB6201 e0d7ff16f490628975772dfd41a3b559 1181 SUPERFAMILY SSF141259 513 588 1.22E-18 T 11-11-2016 IPR003711 CarD-like/TRCF domain RB605 c41235f90eb31ed92c3bfafdc4530192 479 Gene3D G3DSA:3.40.720.10 20 379 1.2E-101 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB605 c41235f90eb31ed92c3bfafdc4530192 479 Pfam PF16385 Domain of unknown function 367 467 1.2E-11 T 11-11-2016 IPR032158 Domain of unknown function DUF4994 RB605 c41235f90eb31ed92c3bfafdc4530192 479 Pfam PF00884 Sulfatase 23 361 3.1E-65 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB605 c41235f90eb31ed92c3bfafdc4530192 479 SUPERFAMILY SSF53649 21 474 4.65E-113 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB605 c41235f90eb31ed92c3bfafdc4530192 479 Gene3D G3DSA:3.30.1120.10 380 472 8.3E-18 T 11-11-2016 RB605 c41235f90eb31ed92c3bfafdc4530192 479 ProSitePatterns PS00149 Sulfatases signature 2. 114 124 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB4702 6070c4bec7463ff9be65e35a236b4765 478 Gene3D G3DSA:3.40.50.1820 192 455 1.6E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4702 6070c4bec7463ff9be65e35a236b4765 478 SUPERFAMILY SSF53474 174 455 4.67E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4702 6070c4bec7463ff9be65e35a236b4765 478 Pfam PF07859 alpha/beta hydrolase fold 221 350 1.3E-10 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB4675 55e121700a0d4deaad899d24d79c684c 628 Gene3D G3DSA:3.40.50.620 129 436 2.7E-80 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB4675 55e121700a0d4deaad899d24d79c684c 628 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 298 316 1.1E-27 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 329 350 1.1E-27 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 134 145 1.1E-27 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 170 179 1.1E-27 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 127 369 1.4E-95 T 11-11-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 111 627 34.684 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 Gene3D G3DSA:1.20.120.640 437 559 2.9E-16 T 11-11-2016 RB4675 55e121700a0d4deaad899d24d79c684c 628 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 112 368 2.7E-105 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 SUPERFAMILY SSF52374 112 442 3.66E-73 T 11-11-2016 RB4675 55e121700a0d4deaad899d24d79c684c 628 Pfam PF09190 DALR domain 496 566 6.5E-15 T 11-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 SMART SM00840 496 577 6.5E-15 T 11-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RB4675 55e121700a0d4deaad899d24d79c684c 628 SUPERFAMILY SSF47323 484 626 4.32E-32 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 278 300 7.5E-5 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 95 115 7.5E-5 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 328 340 2.4E-24 T 11-11-2016 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 168 189 2.4E-24 T 11-11-2016 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 2.4E-24 T 11-11-2016 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 93 118 2.4E-24 T 11-11-2016 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 2.4E-24 T 11-11-2016 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 80 129 8.1E-10 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1134 9094e5c8d843712e7ec86ff07f31b799 537 Pfam PF00361 Proton-conducting membrane transporter 144 401 2.0E-44 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB7869 55f3a589ae85c28918480cf30cbefd83 364 Gene3D G3DSA:3.40.50.1110 182 359 1.6E-36 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7869 55f3a589ae85c28918480cf30cbefd83 364 SUPERFAMILY SSF52266 149 357 1.68E-32 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7869 55f3a589ae85c28918480cf30cbefd83 364 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 185 345 7.7E-16 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB10693 58df94ae90123f2a5f1b58348add2597 565 Pfam PF01235 Sodium:alanine symporter family 149 561 6.5E-131 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RB10693 58df94ae90123f2a5f1b58348add2597 565 PRINTS PR00175 Sodium/alanine symporter signature 466 488 1.6E-49 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RB10693 58df94ae90123f2a5f1b58348add2597 565 PRINTS PR00175 Sodium/alanine symporter signature 287 305 1.6E-49 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RB10693 58df94ae90123f2a5f1b58348add2597 565 PRINTS PR00175 Sodium/alanine symporter signature 405 423 1.6E-49 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RB10693 58df94ae90123f2a5f1b58348add2597 565 PRINTS PR00175 Sodium/alanine symporter signature 527 547 1.6E-49 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RB10693 58df94ae90123f2a5f1b58348add2597 565 PRINTS PR00175 Sodium/alanine symporter signature 315 334 1.6E-49 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RB10693 58df94ae90123f2a5f1b58348add2597 565 PRINTS PR00175 Sodium/alanine symporter signature 184 206 1.6E-49 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RB10693 58df94ae90123f2a5f1b58348add2597 565 TIGRFAM TIGR00835 agcS: amino acid carrier protein 86 558 3.6E-119 T 11-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RB11654 77064f1abdb44dda050a174eef104c4f 416 SUPERFAMILY SSF53187 165 401 2.58E-41 T 11-11-2016 RB11654 77064f1abdb44dda050a174eef104c4f 416 Gene3D G3DSA:3.40.630.10 160 400 6.6E-31 T 11-11-2016 RB11654 77064f1abdb44dda050a174eef104c4f 416 SMART SM00631 166 398 2.8E-4 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RB11654 77064f1abdb44dda050a174eef104c4f 416 Pfam PF00246 Zinc carboxypeptidase 171 383 5.4E-14 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RB6403 a0782367855e024ab24af84be2ae48c7 304 SMART SM00421 207 264 1.4E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB6403 a0782367855e024ab24af84be2ae48c7 304 Pfam PF08448 PAS fold 93 183 8.2E-12 T 11-11-2016 IPR013656 PAS fold-4 RB6403 a0782367855e024ab24af84be2ae48c7 304 Gene3D G3DSA:1.10.10.10 209 269 1.2E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6403 a0782367855e024ab24af84be2ae48c7 304 SUPERFAMILY SSF55785 92 180 1.82E-13 T 11-11-2016 IPR000014 PAS domain RB6403 a0782367855e024ab24af84be2ae48c7 304 Gene3D G3DSA:3.30.450.20 86 180 2.2E-12 T 11-11-2016 RB6403 a0782367855e024ab24af84be2ae48c7 304 Pfam PF00196 Bacterial regulatory proteins, luxR family 209 263 3.0E-13 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB6403 a0782367855e024ab24af84be2ae48c7 304 SUPERFAMILY SSF46894 200 269 1.5E-16 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB6403 a0782367855e024ab24af84be2ae48c7 304 SMART SM00091 82 148 9.2E-9 T 11-11-2016 IPR000014 PAS domain RB6403 a0782367855e024ab24af84be2ae48c7 304 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 224 1.8E-7 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB6403 a0782367855e024ab24af84be2ae48c7 304 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 240 252 1.8E-7 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB6403 a0782367855e024ab24af84be2ae48c7 304 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 224 240 1.8E-7 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB6403 a0782367855e024ab24af84be2ae48c7 304 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 91 147 1.7E-8 T 11-11-2016 IPR000014 PAS domain RB7585 3a706bd509ba47396a0f0dd3fddd7650 481 PIRSF PIRSF006815 15 475 1.0E-162 T 11-11-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 RB7585 3a706bd509ba47396a0f0dd3fddd7650 481 Gene3D G3DSA:3.90.1150.10 349 407 2.8E-6 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB7585 3a706bd509ba47396a0f0dd3fddd7650 481 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 15 475 41.796 T 11-11-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 RB7585 3a706bd509ba47396a0f0dd3fddd7650 481 Gene3D G3DSA:3.40.640.10 99 345 1.4E-22 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB7585 3a706bd509ba47396a0f0dd3fddd7650 481 Pfam PF02347 Glycine cleavage system P-protein 16 420 9.7E-120 T 11-11-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RB7585 3a706bd509ba47396a0f0dd3fddd7650 481 SUPERFAMILY SSF53383 15 475 3.5E-112 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB1902 9732ab4880c384ac18d2854f0cb49327 685 SUPERFAMILY SSF51905 182 343 2.65E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1902 9732ab4880c384ac18d2854f0cb49327 685 SUPERFAMILY SSF51905 33 225 4.35E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 4.5E-19 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 37 56 4.5E-19 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 4.5E-19 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 4.5E-19 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 4.5E-19 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 Pfam PF04324 BFD-like [2Fe-2S] binding domain 451 497 3.8E-7 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain RB1902 9732ab4880c384ac18d2854f0cb49327 685 Gene3D G3DSA:3.50.50.60 138 340 5.0E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 7.9E-10 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 7.9E-10 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 7.9E-10 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 58 7.9E-10 T 11-11-2016 RB1902 9732ab4880c384ac18d2854f0cb49327 685 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 36 314 2.1E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1902 9732ab4880c384ac18d2854f0cb49327 685 Gene3D G3DSA:3.50.50.60 34 137 4.6E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3708 b7af9d3343a29125df21818b7a23239d 668 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 474 591 6.9E-25 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01180 Arginine decarboxylase signature 149 164 9.7E-55 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01180 Arginine decarboxylase signature 70 85 9.7E-55 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01180 Arginine decarboxylase signature 571 592 9.7E-55 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01180 Arginine decarboxylase signature 175 196 9.7E-55 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01180 Arginine decarboxylase signature 518 543 9.7E-55 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01180 Arginine decarboxylase signature 94 108 9.7E-55 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01180 Arginine decarboxylase signature 493 514 9.7E-55 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB3708 b7af9d3343a29125df21818b7a23239d 668 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 81 347 7.4E-43 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 102 120 - T 11-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RB3708 b7af9d3343a29125df21818b7a23239d 668 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 280 293 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RB3708 b7af9d3343a29125df21818b7a23239d 668 Gene3D G3DSA:2.40.37.10 484 614 6.8E-11 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 Gene3D G3DSA:2.40.37.10 335 359 6.8E-11 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 SUPERFAMILY SSF50621 488 600 9.94E-6 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 665 44.335 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 126 138 1.6E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 1.6E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 1.6E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 1.6E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 571 584 1.6E-17 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB3708 b7af9d3343a29125df21818b7a23239d 668 SUPERFAMILY SSF51419 72 349 1.08E-65 T 11-11-2016 IPR029066 PLP-binding barrel RB3708 b7af9d3343a29125df21818b7a23239d 668 Gene3D G3DSA:3.20.20.10 73 334 1.7E-56 T 11-11-2016 IPR029066 PLP-binding barrel RB3708 b7af9d3343a29125df21818b7a23239d 668 PIRSF PIRSF001336 2 666 2.7E-271 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 Pfam PF00578 AhpC/TSA family 631 751 1.8E-14 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 Pfam PF13620 Carboxypeptidase regulatory-like domain 98 181 1.2E-9 T 11-11-2016 RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 Pfam PF13620 Carboxypeptidase regulatory-like domain 389 495 1.4E-7 T 11-11-2016 RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 Gene3D G3DSA:2.60.40.1120 102 182 2.4E-4 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 Gene3D G3DSA:2.60.40.1120 501 589 5.7E-4 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 Gene3D G3DSA:2.60.40.1120 389 495 9.6E-9 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 ProSitePatterns PS00194 Thioredoxin family active site. 660 678 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 SUPERFAMILY SSF49464 501 544 4.71E-5 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 SUPERFAMILY SSF52833 630 752 1.47E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 Gene3D G3DSA:3.40.30.10 628 753 7.1E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 SUPERFAMILY SSF49464 103 183 5.49E-7 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 SUPERFAMILY SSF49464 441 494 1.69E-8 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain RB8615 2e8fa35e30454e26e97acd2c7eda64ba 788 SUPERFAMILY SSF49464 388 412 1.69E-8 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain RB10117 4ed5915921d0b29d5330d86f4dbee5ac 474 Gene3D G3DSA:3.40.720.10 32 143 3.6E-32 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB10117 4ed5915921d0b29d5330d86f4dbee5ac 474 Pfam PF00884 Sulfatase 35 135 5.6E-20 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10117 4ed5915921d0b29d5330d86f4dbee5ac 474 Pfam PF00884 Sulfatase 157 301 2.3E-17 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10117 4ed5915921d0b29d5330d86f4dbee5ac 474 SUPERFAMILY SSF53649 402 447 2.18E-94 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10117 4ed5915921d0b29d5330d86f4dbee5ac 474 SUPERFAMILY SSF53649 33 366 2.18E-94 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10117 4ed5915921d0b29d5330d86f4dbee5ac 474 Gene3D G3DSA:3.30.1120.10 404 450 4.2E-20 T 11-11-2016 RB10117 4ed5915921d0b29d5330d86f4dbee5ac 474 Gene3D G3DSA:3.30.1120.10 351 368 4.2E-20 T 11-11-2016 RB10117 4ed5915921d0b29d5330d86f4dbee5ac 474 Gene3D G3DSA:3.40.720.10 153 350 3.1E-39 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3710 00d29caf929712eefaaf520838525bd1 524 Pfam PF00795 Carbon-nitrogen hydrolase 233 492 7.1E-28 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB3710 00d29caf929712eefaaf520838525bd1 524 SUPERFAMILY SSF55729 17 149 3.85E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB3710 00d29caf929712eefaaf520838525bd1 524 Gene3D G3DSA:3.60.110.10 228 512 2.8E-56 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB3710 00d29caf929712eefaaf520838525bd1 524 Gene3D G3DSA:3.40.630.30 17 149 1.4E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB3710 00d29caf929712eefaaf520838525bd1 524 SUPERFAMILY SSF56317 230 513 2.62E-56 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB6416 87cdc5cdc8be189a22ef685150305d81 453 SUPERFAMILY SSF53335 127 449 1.66E-66 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6416 87cdc5cdc8be189a22ef685150305d81 453 Gene3D G3DSA:3.30.750.80 121 220 1.7E-17 T 11-11-2016 RB6416 87cdc5cdc8be189a22ef685150305d81 453 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 234 407 1.5E-18 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RB6416 87cdc5cdc8be189a22ef685150305d81 453 Gene3D G3DSA:2.30.130.10 79 120 1.6E-9 T 11-11-2016 IPR015947 PUA-like domain RB6416 87cdc5cdc8be189a22ef685150305d81 453 Gene3D G3DSA:2.30.130.10 26 41 1.6E-9 T 11-11-2016 IPR015947 PUA-like domain RB6416 87cdc5cdc8be189a22ef685150305d81 453 Gene3D G3DSA:3.40.50.150 221 452 1.5E-64 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 423 449 1.4E-7 T 11-11-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Pfam PF12826 Helix-hairpin-helix motif 540 599 1.1E-15 T 11-11-2016 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 627 695 6.6E-12 T 11-11-2016 IPR001357 BRCT domain RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 SUPERFAMILY SSF47781 420 614 2.93E-45 T 11-11-2016 IPR010994 RuvA domain 2-like RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Hamap MF_01588 DNA ligase [ligA]. 10 701 55.799 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 SUPERFAMILY SSF52113 627 697 1.38E-17 T 11-11-2016 IPR001357 BRCT domain RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 SMART SM00292 627 704 2.9E-8 T 11-11-2016 IPR001357 BRCT domain RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 PIRSF PIRSF001604 3 706 7.0E-242 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Gene3D G3DSA:1.10.287.610 9 75 8.8E-25 T 11-11-2016 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 13 332 1.2E-97 T 11-11-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 338 413 8.1E-33 T 11-11-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Gene3D G3DSA:2.40.50.140 335 406 2.1E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Gene3D G3DSA:3.30.470.30 127 268 9.7E-39 T 11-11-2016 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 11-11-2016 IPR018239 NAD-dependent DNA ligase, active site RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Gene3D G3DSA:1.10.150.20 450 533 8.8E-21 T 11-11-2016 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 SMART SM00532 11 463 7.8E-193 T 11-11-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 19 697 1.5E-219 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 SUPERFAMILY SSF56091 11 331 3.52E-96 T 11-11-2016 RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Gene3D G3DSA:3.40.50.10190 626 697 1.4E-23 T 11-11-2016 IPR001357 BRCT domain RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 347 362 - T 11-11-2016 IPR033136 NAD-dependent DNA ligase, conserved site RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 SUPERFAMILY SSF50249 335 414 3.6E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10711 d5750a63d32aeed16160eb0b80a2d02b 706 Gene3D G3DSA:1.10.150.20 534 614 2.2E-18 T 11-11-2016 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Pfam PF08447 PAS fold 193 277 4.0E-9 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Pfam PF08447 PAS fold 451 534 1.1E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SUPERFAMILY SSF47384 546 628 3.92E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SUPERFAMILY SSF55785 413 538 3.63E-24 T 11-11-2016 IPR000014 PAS domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SMART SM00086 243 285 7.2 T 11-11-2016 IPR001610 PAC motif RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SMART SM00086 499 541 1.0E-4 T 11-11-2016 IPR001610 PAC motif RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Gene3D G3DSA:3.40.50.2300 833 952 1.9E-37 T 11-11-2016 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SUPERFAMILY SSF52172 833 952 1.35E-35 T 11-11-2016 IPR011006 CheY-like superfamily RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Gene3D G3DSA:3.30.450.20 406 556 3.9E-27 T 11-11-2016 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SMART SM00448 833 947 8.6E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Pfam PF00512 His Kinase A (phospho-acceptor) domain 561 626 1.2E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 423 548 3.6E-18 T 11-11-2016 IPR000014 PAS domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 190 292 2.1E-6 T 11-11-2016 IPR000014 PAS domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SUPERFAMILY SSF55874 615 803 3.27E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Pfam PF08448 PAS fold 307 415 1.8E-7 T 11-11-2016 IPR013656 PAS fold-4 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SMART SM00388 561 626 1.7E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Pfam PF00072 Response regulator receiver domain 835 947 7.8E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SMART SM00091 297 362 0.024 T 11-11-2016 IPR000014 PAS domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SMART SM00091 427 493 2.4E-7 T 11-11-2016 IPR000014 PAS domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SUPERFAMILY SSF55785 182 287 1.92E-12 T 11-11-2016 IPR000014 PAS domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SMART SM00387 673 807 1.3E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Gene3D G3DSA:1.10.287.130 557 622 2.8E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Gene3D G3DSA:3.30.565.10 626 803 2.2E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Gene3D G3DSA:3.30.450.20 162 282 5.6E-16 T 11-11-2016 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 PRINTS PR00344 Bacterial sensor protein C-terminal signature 767 785 4.1E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 PRINTS PR00344 Bacterial sensor protein C-terminal signature 732 746 4.1E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 PRINTS PR00344 Bacterial sensor protein C-terminal signature 750 760 4.1E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 PRINTS PR00344 Bacterial sensor protein C-terminal signature 791 804 4.1E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 674 804 3.0E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 Gene3D G3DSA:3.30.450.20 283 405 1.5E-13 T 11-11-2016 RB13181 c4880cee94c4e4c0a791fb194b3213d7 953 SUPERFAMILY SSF55785 282 409 3.14E-14 T 11-11-2016 IPR000014 PAS domain RB6383 d44af3d7d8b1673fede371c70245873b 573 Gene3D G3DSA:2.70.98.10 39 395 1.9E-116 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RB6383 d44af3d7d8b1673fede371c70245873b 573 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 39 393 3.8E-115 T 11-11-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 RB6383 d44af3d7d8b1673fede371c70245873b 573 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 432 554 1.2E-6 T 11-11-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 RB6383 d44af3d7d8b1673fede371c70245873b 573 PIRSF PIRSF006281 1 560 3.7E-181 T 11-11-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D RB6383 d44af3d7d8b1673fede371c70245873b 573 SUPERFAMILY SSF81296 455 559 1.68E-9 T 11-11-2016 IPR014756 Immunoglobulin E-set RB6383 d44af3d7d8b1673fede371c70245873b 573 Gene3D G3DSA:2.60.40.10 472 559 1.1E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB6383 d44af3d7d8b1673fede371c70245873b 573 SUPERFAMILY SSF74650 39 397 1.13E-117 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RB6623 8e17c45cb48c52bde0e0050f7976c455 315 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 124 308 5.7E-50 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RB6623 8e17c45cb48c52bde0e0050f7976c455 315 SUPERFAMILY SSF54675 12 123 1.14E-24 T 11-11-2016 RB6623 8e17c45cb48c52bde0e0050f7976c455 315 PIRSF PIRSF006250 14 311 3.8E-75 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 RB6623 8e17c45cb48c52bde0e0050f7976c455 315 SUPERFAMILY SSF51690 124 308 4.32E-49 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RB6623 8e17c45cb48c52bde0e0050f7976c455 315 Gene3D G3DSA:3.20.20.70 146 299 5.1E-49 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6623 8e17c45cb48c52bde0e0050f7976c455 315 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 36 122 7.4E-19 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 RB6623 8e17c45cb48c52bde0e0050f7976c455 315 Gene3D G3DSA:3.90.1170.20 16 145 4.1E-37 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 RB6623 8e17c45cb48c52bde0e0050f7976c455 315 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 25 308 4.2E-76 T 11-11-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 RB9107 5a89733d07813f708213bde6ec763c3f 363 Gene3D G3DSA:3.30.70.260 272 357 1.0E-25 T 11-11-2016 RB9107 5a89733d07813f708213bde6ec763c3f 363 Gene3D G3DSA:3.40.190.10 94 176 3.2E-24 T 11-11-2016 RB9107 5a89733d07813f708213bde6ec763c3f 363 PIRSF PIRSF001500 4 359 5.9E-85 T 11-11-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RB9107 5a89733d07813f708213bde6ec763c3f 363 Gene3D G3DSA:3.40.190.10 177 255 3.3E-23 T 11-11-2016 RB9107 5a89733d07813f708213bde6ec763c3f 363 Pfam PF00800 Prephenate dehydratase 95 269 8.8E-56 T 11-11-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RB9107 5a89733d07813f708213bde6ec763c3f 363 SUPERFAMILY SSF53850 94 275 3.69E-52 T 11-11-2016 RB9107 5a89733d07813f708213bde6ec763c3f 363 SUPERFAMILY SSF55021 262 357 3.52E-24 T 11-11-2016 RB10853 571f283f5fd0f07ce90ed88b86545fab 288 SUPERFAMILY SSF53474 209 280 2.81E-37 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10853 571f283f5fd0f07ce90ed88b86545fab 288 SUPERFAMILY SSF53474 15 139 2.81E-37 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10853 571f283f5fd0f07ce90ed88b86545fab 288 Gene3D G3DSA:3.40.50.1820 27 280 5.7E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10853 571f283f5fd0f07ce90ed88b86545fab 288 Pfam PF12146 Serine aminopeptidase, S33 32 266 4.4E-49 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 RB9306 ef1714248c71320ee3b85c56405e45d0 296 Gene3D G3DSA:1.10.8.10 10 95 1.0E-23 T 11-11-2016 RB9306 ef1714248c71320ee3b85c56405e45d0 296 SUPERFAMILY SSF53335 12 291 1.79E-52 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9306 ef1714248c71320ee3b85c56405e45d0 296 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 34 291 1.2E-80 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RB9306 ef1714248c71320ee3b85c56405e45d0 296 Pfam PF05175 Methyltransferase small domain 121 210 2.9E-17 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 RB9306 ef1714248c71320ee3b85c56405e45d0 296 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 291 1.5E-70 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RB9306 ef1714248c71320ee3b85c56405e45d0 296 Gene3D G3DSA:3.40.50.150 97 295 2.3E-59 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9306 ef1714248c71320ee3b85c56405e45d0 296 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 12 295 44.86 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RB11328 2e72c512c8b70c50dfae83b7c44a66b1 338 SUPERFAMILY SSF46785 6 92 1.09E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11328 2e72c512c8b70c50dfae83b7c44a66b1 338 Gene3D G3DSA:1.10.10.10 7 96 5.4E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11328 2e72c512c8b70c50dfae83b7c44a66b1 338 Gene3D G3DSA:3.40.190.10 218 277 2.3E-10 T 11-11-2016 RB11328 2e72c512c8b70c50dfae83b7c44a66b1 338 Pfam PF03466 LysR substrate binding domain 97 330 1.2E-23 T 11-11-2016 IPR005119 LysR, substrate-binding RB11328 2e72c512c8b70c50dfae83b7c44a66b1 338 Gene3D G3DSA:3.40.190.10 102 217 3.0E-12 T 11-11-2016 RB11328 2e72c512c8b70c50dfae83b7c44a66b1 338 SUPERFAMILY SSF53850 100 307 6.98E-20 T 11-11-2016 RB11328 2e72c512c8b70c50dfae83b7c44a66b1 338 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 73 6.4E-14 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB7169 e14aea7f02f57998bf6df3ca66ad08d8 193 Pfam PF07977 FabA-like domain 31 137 7.1E-9 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RB7169 e14aea7f02f57998bf6df3ca66ad08d8 193 Gene3D G3DSA:3.10.129.10 28 150 8.9E-22 T 11-11-2016 IPR029069 HotDog domain RB7169 e14aea7f02f57998bf6df3ca66ad08d8 193 SUPERFAMILY SSF54637 19 152 3.64E-23 T 11-11-2016 IPR029069 HotDog domain RB13309 b82705e8ed8ac2db4399811709348936 471 SUPERFAMILY SSF48695 223 453 2.46E-37 T 11-11-2016 IPR011031 Multihaem cytochrome RB13309 b82705e8ed8ac2db4399811709348936 471 SUPERFAMILY SSF48695 105 146 2.46E-37 T 11-11-2016 IPR011031 Multihaem cytochrome RB13309 b82705e8ed8ac2db4399811709348936 471 Gene3D G3DSA:1.10.710.10 234 323 1.3E-27 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB13309 b82705e8ed8ac2db4399811709348936 471 Gene3D G3DSA:1.10.710.10 361 429 1.3E-27 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB13309 b82705e8ed8ac2db4399811709348936 471 Gene3D G3DSA:1.10.710.10 112 154 1.3E-27 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB13309 b82705e8ed8ac2db4399811709348936 471 Pfam PF13435 Cytochrome c554 and c-prime 244 279 3.7E-6 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 Gene3D G3DSA:1.25.10.10 457 611 3.0E-8 T 11-11-2016 IPR011989 Armadillo-like helical RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 Pfam PF00034 Cytochrome c 860 991 8.9E-25 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 SUPERFAMILY SSF48371 457 576 1.27E-12 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 SUPERFAMILY SSF48371 625 845 1.27E-12 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 SUPERFAMILY SSF46626 965 990 8.11E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 SUPERFAMILY SSF46626 855 934 8.11E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 858 989 2.6E-34 T 11-11-2016 IPR013427 Haem-binding domain, putative RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 Gene3D G3DSA:2.120.10.30 35 444 4.1E-20 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 Gene3D G3DSA:1.10.760.10 855 929 1.0E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 Gene3D G3DSA:1.10.760.10 965 991 1.0E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 58 442 4.9E-88 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 SUPERFAMILY SSF50952 316 400 2.35E-8 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB3322 45b4c89ccc655fdcab3bf9d4acfd1440 991 SUPERFAMILY SSF50952 43 268 2.35E-8 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB11183 f53716977d32c0b19056ae8705a955d8 315 PRINTS PR01438 Universal stress protein signature 255 267 1.7E-8 T 11-11-2016 IPR006015 Universal stress protein A RB11183 f53716977d32c0b19056ae8705a955d8 315 PRINTS PR01438 Universal stress protein signature 273 295 1.7E-8 T 11-11-2016 IPR006015 Universal stress protein A RB11183 f53716977d32c0b19056ae8705a955d8 315 PRINTS PR01438 Universal stress protein signature 155 173 1.7E-8 T 11-11-2016 IPR006015 Universal stress protein A RB11183 f53716977d32c0b19056ae8705a955d8 315 SUPERFAMILY SSF52402 156 300 1.04E-30 T 11-11-2016 RB11183 f53716977d32c0b19056ae8705a955d8 315 SUPERFAMILY SSF52402 1 145 5.19E-31 T 11-11-2016 RB11183 f53716977d32c0b19056ae8705a955d8 315 Gene3D G3DSA:3.40.50.620 2 145 4.4E-31 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB11183 f53716977d32c0b19056ae8705a955d8 315 Gene3D G3DSA:3.40.50.620 156 297 9.2E-31 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB11183 f53716977d32c0b19056ae8705a955d8 315 Pfam PF00582 Universal stress protein family 156 295 2.8E-25 T 11-11-2016 IPR006016 UspA GO:0006950 RB11183 f53716977d32c0b19056ae8705a955d8 315 Pfam PF00582 Universal stress protein family 2 144 2.4E-24 T 11-11-2016 IPR006016 UspA GO:0006950 RB5780 ace85ffe58b2f8ba7684562619988796 165 Pfam PF00072 Response regulator receiver domain 12 133 4.0E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5780 ace85ffe58b2f8ba7684562619988796 165 SMART SM00448 10 133 5.5E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5780 ace85ffe58b2f8ba7684562619988796 165 SUPERFAMILY SSF52172 8 144 1.99E-25 T 11-11-2016 IPR011006 CheY-like superfamily RB5780 ace85ffe58b2f8ba7684562619988796 165 Gene3D G3DSA:3.40.50.2300 7 136 1.3E-24 T 11-11-2016 RB8039 555ee410e2c21313305d51bb53494948 1595 Gene3D G3DSA:2.140.10.10 1220 1283 1.6E-5 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB8039 555ee410e2c21313305d51bb53494948 1595 Gene3D G3DSA:2.140.10.10 1150 1185 1.6E-5 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB8039 555ee410e2c21313305d51bb53494948 1595 Gene3D G3DSA:2.140.10.10 355 590 7.8E-16 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB8039 555ee410e2c21313305d51bb53494948 1595 SUPERFAMILY SSF50998 349 592 1.74E-11 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB8039 555ee410e2c21313305d51bb53494948 1595 SUPERFAMILY SSF50998 1349 1449 3.73E-10 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB8039 555ee410e2c21313305d51bb53494948 1595 SUPERFAMILY SSF50998 1178 1317 3.73E-10 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB8039 555ee410e2c21313305d51bb53494948 1595 Gene3D G3DSA:1.25.40.10 769 817 1.4E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8039 555ee410e2c21313305d51bb53494948 1595 Pfam PF13360 PQQ-like domain 464 584 2.4E-5 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB8039 555ee410e2c21313305d51bb53494948 1595 Pfam PF13360 PQQ-like domain 612 763 1.6E-5 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB8039 555ee410e2c21313305d51bb53494948 1595 Pfam PF13360 PQQ-like domain 1180 1409 9.2E-10 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB8039 555ee410e2c21313305d51bb53494948 1595 SUPERFAMILY SSF48452 771 819 2.19E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3942 8b309ceb9e62b47ee5d6a37711426dc3 177 Gene3D G3DSA:3.40.1280.10 23 171 2.2E-53 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RB3942 8b309ceb9e62b47ee5d6a37711426dc3 177 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 26 174 31.643 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RB3942 8b309ceb9e62b47ee5d6a37711426dc3 177 PIRSF PIRSF029256 25 174 4.8E-54 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RB3942 8b309ceb9e62b47ee5d6a37711426dc3 177 Pfam PF00588 SpoU rRNA Methylase family 27 165 3.6E-33 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RB3942 8b309ceb9e62b47ee5d6a37711426dc3 177 SUPERFAMILY SSF75217 26 171 1.44E-38 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Gene3D G3DSA:3.40.640.10 860 1076 7.1E-82 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Gene3D G3DSA:1.10.1200.10 668 744 3.4E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Gene3D G3DSA:3.40.50.980 45 210 2.1E-37 T 11-11-2016 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Pfam PF00501 AMP-binding enzyme 50 514 3.1E-82 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Gene3D G3DSA:3.90.1150.10 1077 1186 2.2E-22 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 SUPERFAMILY SSF47336 668 746 3.8E-13 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 SUPERFAMILY SSF53383 836 1188 1.63E-103 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Gene3D G3DSA:3.40.50.980 211 373 3.7E-33 T 11-11-2016 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Pfam PF00155 Aminotransferase class I and II 843 1184 6.4E-48 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Pfam PF00550 Phosphopantetheine attachment site 671 736 1.3E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 SUPERFAMILY SSF56801 42 378 2.88E-112 T 11-11-2016 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 SUPERFAMILY SSF56801 422 622 2.88E-112 T 11-11-2016 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Gene3D G3DSA:3.30.300.30 505 615 7.3E-14 T 11-11-2016 RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 ProSitePatterns PS00455 Putative AMP-binding domain signature. 204 215 - T 11-11-2016 IPR020845 AMP-binding, conserved site RB386 d9b248f9345552bc8fc93ed7a32e5a60 1204 Gene3D G3DSA:2.30.38.10 426 502 1.3E-17 T 11-11-2016 RB8882 8b24649f3d223f5e535f269efb28cf69 349 Gene3D G3DSA:3.30.700.10 27 84 8.7E-7 T 11-11-2016 RB8882 8b24649f3d223f5e535f269efb28cf69 349 SUPERFAMILY SSF54523 27 122 2.98E-20 T 11-11-2016 RB8882 8b24649f3d223f5e535f269efb28cf69 349 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 23 45 5.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8882 8b24649f3d223f5e535f269efb28cf69 349 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 25 46 9.2E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8882 8b24649f3d223f5e535f269efb28cf69 349 Pfam PF07596 Protein of unknown function (DUF1559) 51 329 1.6E-65 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB9029 de71828c110e7aa57c1e74ae794a685f 759 Gene3D G3DSA:3.40.390.10 546 759 5.6E-113 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB9029 de71828c110e7aa57c1e74ae794a685f 759 Gene3D G3DSA:3.40.390.10 385 506 5.6E-113 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB9029 de71828c110e7aa57c1e74ae794a685f 759 Pfam PF01431 Peptidase family M13 555 755 4.2E-77 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RB9029 de71828c110e7aa57c1e74ae794a685f 759 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 586 602 5.9E-23 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RB9029 de71828c110e7aa57c1e74ae794a685f 759 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 565 577 5.9E-23 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RB9029 de71828c110e7aa57c1e74ae794a685f 759 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 657 668 5.9E-23 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RB9029 de71828c110e7aa57c1e74ae794a685f 759 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 547 559 5.9E-23 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RB9029 de71828c110e7aa57c1e74ae794a685f 759 Pfam PF05649 Peptidase family M13 126 503 2.8E-98 T 11-11-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 RB9029 de71828c110e7aa57c1e74ae794a685f 759 SUPERFAMILY SSF55486 107 759 4.98E-216 T 11-11-2016 RB8718 643e1ab17b27df17c21634a792db1db9 302 SUPERFAMILY SSF54523 30 171 5.49E-21 T 11-11-2016 RB8718 643e1ab17b27df17c21634a792db1db9 302 TIGRFAM TIGR04294 pre_pil_HX9DG: prepilin-type processing-associated H-X9-DG domain 261 275 0.002 T 11-11-2016 IPR027558 Prepilin-type processing-associated H-X9-DG domain RB8718 643e1ab17b27df17c21634a792db1db9 302 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 27 49 1.7E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8718 643e1ab17b27df17c21634a792db1db9 302 Pfam PF07596 Protein of unknown function (DUF1559) 54 284 1.8E-55 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8718 643e1ab17b27df17c21634a792db1db9 302 Gene3D G3DSA:3.30.700.10 30 92 7.2E-7 T 11-11-2016 RB8718 643e1ab17b27df17c21634a792db1db9 302 Pfam PF13633 Prokaryotic N-terminal methylation site 28 53 8.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1257 2091c7c5d48a473115b9cadd72c7742f 375 Gene3D G3DSA:2.120.10.10 52 373 1.3E-61 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB1257 2091c7c5d48a473115b9cadd72c7742f 375 Pfam PF13088 BNR repeat-like domain 74 356 1.8E-92 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB1257 2091c7c5d48a473115b9cadd72c7742f 375 SUPERFAMILY SSF50939 49 373 5.33E-52 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB12379 08486a3067be9652308ab08323a5043e 224 SUPERFAMILY SSF63380 1 97 4.51E-22 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB12379 08486a3067be9652308ab08323a5043e 224 Pfam PF00677 Lumazine binding domain 3 90 7.7E-19 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB12379 08486a3067be9652308ab08323a5043e 224 Pfam PF00677 Lumazine binding domain 104 188 5.5E-22 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB12379 08486a3067be9652308ab08323a5043e 224 Gene3D G3DSA:2.40.30.20 6 108 7.4E-29 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB12379 08486a3067be9652308ab08323a5043e 224 Gene3D G3DSA:2.40.30.20 109 199 1.1E-28 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB12379 08486a3067be9652308ab08323a5043e 224 PIRSF PIRSF000498 1 213 7.7E-68 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB12379 08486a3067be9652308ab08323a5043e 224 SUPERFAMILY SSF63380 98 200 2.47E-32 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB12379 08486a3067be9652308ab08323a5043e 224 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 8.3E-64 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB8680 43b4354767f22d0dab9d9b9f6efd455d 488 Pfam PF10996 Beta-Casp domain 278 413 7.3E-23 T 11-11-2016 IPR022712 Beta-Casp domain RB8680 43b4354767f22d0dab9d9b9f6efd455d 488 Pfam PF00753 Metallo-beta-lactamase superfamily 66 238 2.0E-12 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB8680 43b4354767f22d0dab9d9b9f6efd455d 488 SUPERFAMILY SSF56281 45 484 2.1E-112 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB8680 43b4354767f22d0dab9d9b9f6efd455d 488 Gene3D G3DSA:3.60.15.10 45 286 9.0E-42 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB8680 43b4354767f22d0dab9d9b9f6efd455d 488 SMART SM01027 278 414 1.0E-45 T 11-11-2016 IPR022712 Beta-Casp domain RB8680 43b4354767f22d0dab9d9b9f6efd455d 488 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 428 486 5.0E-11 T 11-11-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RB8680 43b4354767f22d0dab9d9b9f6efd455d 488 SMART SM00849 57 273 1.4E-16 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB12617 16dde764cdd4cc108fdc035b5ec80233 195 Pfam PF00186 Dihydrofolate reductase 31 186 3.9E-46 T 11-11-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RB12617 16dde764cdd4cc108fdc035b5ec80233 195 SUPERFAMILY SSF53597 30 183 4.45E-46 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RB12617 16dde764cdd4cc108fdc035b5ec80233 195 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 42 64 - T 11-11-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 RB12617 16dde764cdd4cc108fdc035b5ec80233 195 Gene3D G3DSA:3.40.430.10 29 187 8.6E-46 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RB12617 16dde764cdd4cc108fdc035b5ec80233 195 PIRSF PIRSF000194 27 189 3.1E-47 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RB12617 16dde764cdd4cc108fdc035b5ec80233 195 PRINTS PR00070 Dihydrofolate reductase signature 56 64 2.9E-14 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RB12617 16dde764cdd4cc108fdc035b5ec80233 195 PRINTS PR00070 Dihydrofolate reductase signature 69 80 2.9E-14 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RB12617 16dde764cdd4cc108fdc035b5ec80233 195 PRINTS PR00070 Dihydrofolate reductase signature 42 52 2.9E-14 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RB12617 16dde764cdd4cc108fdc035b5ec80233 195 PRINTS PR00070 Dihydrofolate reductase signature 119 133 2.9E-14 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RB318 786843891199610572ac6b188e15ff95 81 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 73 6.0E-9 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB318 786843891199610572ac6b188e15ff95 81 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 6.2E-34 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB318 786843891199610572ac6b188e15ff95 81 Pfam PF00550 Phosphopantetheine attachment site 6 73 5.0E-15 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB318 786843891199610572ac6b188e15ff95 81 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site RB318 786843891199610572ac6b188e15ff95 81 Gene3D G3DSA:1.10.1200.10 3 76 4.7E-34 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB318 786843891199610572ac6b188e15ff95 81 SUPERFAMILY SSF47336 3 77 3.66E-23 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB318 786843891199610572ac6b188e15ff95 81 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.964 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1044 ca1d198af4bc738022ee679be15752cc 269 Gene3D G3DSA:3.20.20.140 1 259 4.2E-19 T 11-11-2016 RB1044 ca1d198af4bc738022ee679be15752cc 269 PIRSF PIRSF005295 2 262 1.5E-76 T 11-11-2016 IPR012022 Protein of unknown function UCP005295 RB1044 ca1d198af4bc738022ee679be15752cc 269 SUPERFAMILY SSF51556 1 259 6.81E-40 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB1044 ca1d198af4bc738022ee679be15752cc 269 Pfam PF01026 TatD related DNase 62 216 6.6E-9 T 11-11-2016 IPR001130 TatD family GO:0016788 RB12768 bec6b31f5297f4d98bcc50c1abf3268b 701 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 157 261 3.5E-24 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RB12768 bec6b31f5297f4d98bcc50c1abf3268b 701 SUPERFAMILY SSF52540 298 680 6.97E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12768 bec6b31f5297f4d98bcc50c1abf3268b 701 SMART SM00382 434 555 1.1E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB12768 bec6b31f5297f4d98bcc50c1abf3268b 701 Gene3D G3DSA:3.30.450.90 282 406 7.1E-46 T 11-11-2016 RB12768 bec6b31f5297f4d98bcc50c1abf3268b 701 SUPERFAMILY SSF160246 117 259 1.05E-36 T 11-11-2016 RB12768 bec6b31f5297f4d98bcc50c1abf3268b 701 Pfam PF00437 Type II/IV secretion system protein 308 573 5.9E-73 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB12768 bec6b31f5297f4d98bcc50c1abf3268b 701 Gene3D G3DSA:3.40.50.300 416 685 1.8E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7866 807123b378f2017659e587848e62e658 464 SUPERFAMILY SSF103491 1 444 3.92E-115 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7866 807123b378f2017659e587848e62e658 464 Gene3D G3DSA:1.10.3370.10 1 454 1.0E-135 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7866 807123b378f2017659e587848e62e658 464 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 453 27.83 T 11-11-2016 IPR026593 Protein translocase subunit SecY RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 386 404 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 331 353 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 282 301 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 183 206 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 422 440 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 157 182 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 69 89 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 2.6E-86 T 11-11-2016 RB7866 807123b378f2017659e587848e62e658 464 ProSitePatterns PS00756 Protein secY signature 2. 176 193 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7866 807123b378f2017659e587848e62e658 464 ProSitePatterns PS00755 Protein secY signature 1. 70 89 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7866 807123b378f2017659e587848e62e658 464 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 449 3.6E-119 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7866 807123b378f2017659e587848e62e658 464 Pfam PF00344 SecY translocase 70 436 1.4E-115 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7866 807123b378f2017659e587848e62e658 464 PIRSF PIRSF004557 1 459 3.7E-138 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7314 e6d4342d8a0ba31dd7254a3373f6ba34 438 Pfam PF13407 Periplasmic binding protein domain 144 404 4.8E-62 T 11-11-2016 IPR025997 Periplasmic binding protein RB7314 e6d4342d8a0ba31dd7254a3373f6ba34 438 SUPERFAMILY SSF53822 141 424 1.11E-66 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB7314 e6d4342d8a0ba31dd7254a3373f6ba34 438 Gene3D G3DSA:3.40.50.2300 138 261 1.5E-40 T 11-11-2016 RB7314 e6d4342d8a0ba31dd7254a3373f6ba34 438 Gene3D G3DSA:3.40.50.2300 262 414 2.4E-41 T 11-11-2016 RB6945 5d6a6490d8d7b76cd19b07643ddaed93 589 SUPERFAMILY SSF158472 287 336 5.89E-10 T 11-11-2016 RB6945 5d6a6490d8d7b76cd19b07643ddaed93 589 Pfam PF00672 HAMP domain 269 336 2.4E-15 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB6945 5d6a6490d8d7b76cd19b07643ddaed93 589 Gene3D G3DSA:3.30.70.1230 368 549 4.6E-42 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB6945 5d6a6490d8d7b76cd19b07643ddaed93 589 SMART SM00304 287 339 6.6E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB6945 5d6a6490d8d7b76cd19b07643ddaed93 589 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 368 546 4.4E-34 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB6945 5d6a6490d8d7b76cd19b07643ddaed93 589 SMART SM00044 336 531 2.4E-15 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB6945 5d6a6490d8d7b76cd19b07643ddaed93 589 SUPERFAMILY SSF55073 364 549 5.97E-52 T 11-11-2016 IPR029787 Nucleotide cyclase RB510 0e5e90b4b62be1bb809c41845ad0665d 416 Gene3D G3DSA:1.50.10.20 69 326 1.1E-24 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB510 0e5e90b4b62be1bb809c41845ad0665d 416 Gene3D G3DSA:1.50.10.20 371 405 1.1E-24 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB510 0e5e90b4b62be1bb809c41845ad0665d 416 SUPERFAMILY SSF48239 71 342 5.02E-32 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB510 0e5e90b4b62be1bb809c41845ad0665d 416 SUPERFAMILY SSF48239 331 404 3.56E-5 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB8205 f0b58da2213855ec6e502f416ab357af 233 SUPERFAMILY SSF50486 27 226 6.28E-58 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RB8205 f0b58da2213855ec6e502f416ab357af 233 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 28 219 5.7E-46 T 11-11-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RB8205 f0b58da2213855ec6e502f416ab357af 233 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 30 219 27.957 T 11-11-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RB8205 f0b58da2213855ec6e502f416ab357af 233 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 31 216 3.0E-54 T 11-11-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RB8205 f0b58da2213855ec6e502f416ab357af 233 Gene3D G3DSA:3.10.300.10 26 227 7.4E-60 T 11-11-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RB8722 b06878e8ab0ba7901eff139ed14bc05c 255 Pfam PF01797 Transposase IS200 like 165 236 6.2E-6 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB8722 b06878e8ab0ba7901eff139ed14bc05c 255 SUPERFAMILY SSF143422 140 242 1.02E-18 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB8722 b06878e8ab0ba7901eff139ed14bc05c 255 SMART SM01321 60 236 2.3E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB8722 b06878e8ab0ba7901eff139ed14bc05c 255 Gene3D G3DSA:3.30.70.1290 161 239 2.9E-12 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB7867 31282735f11b9bedc3d983f288c592e4 207 SUPERFAMILY SSF52540 17 197 1.47E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7867 31282735f11b9bedc3d983f288c592e4 207 Gene3D G3DSA:3.40.50.300 16 198 3.8E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7867 31282735f11b9bedc3d983f288c592e4 207 Pfam PF00406 Adenylate kinase 21 174 1.4E-42 T 11-11-2016 RB7867 31282735f11b9bedc3d983f288c592e4 207 ProSitePatterns PS00113 Adenylate kinase signature. 93 104 - T 11-11-2016 RB7867 31282735f11b9bedc3d983f288c592e4 207 Hamap MF_00235 Adenylate kinase [adk]. 16 198 40.04 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB7867 31282735f11b9bedc3d983f288c592e4 207 PRINTS PR00094 Adenylate kinase signature 162 176 3.0E-23 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB7867 31282735f11b9bedc3d983f288c592e4 207 PRINTS PR00094 Adenylate kinase signature 145 160 3.0E-23 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB7867 31282735f11b9bedc3d983f288c592e4 207 PRINTS PR00094 Adenylate kinase signature 93 109 3.0E-23 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB7867 31282735f11b9bedc3d983f288c592e4 207 PRINTS PR00094 Adenylate kinase signature 19 32 3.0E-23 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB4278 04b0175bfa54df9a0e2f426ba0a6745a 921 Pfam PF14870 Photosynthesis system II assembly factor YCF48 489 630 3.2E-12 T 11-11-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain RB4278 04b0175bfa54df9a0e2f426ba0a6745a 921 Gene3D G3DSA:1.20.1260.10 14 88 7.3E-11 T 11-11-2016 IPR012347 Ferritin-related RB4278 04b0175bfa54df9a0e2f426ba0a6745a 921 SUPERFAMILY SSF110296 638 809 3.4E-15 T 11-11-2016 RB4278 04b0175bfa54df9a0e2f426ba0a6745a 921 Gene3D G3DSA:2.130.10.140 624 788 1.1E-16 T 11-11-2016 RB4278 04b0175bfa54df9a0e2f426ba0a6745a 921 Gene3D G3DSA:2.130.10.140 493 623 6.0E-16 T 11-11-2016 RB4278 04b0175bfa54df9a0e2f426ba0a6745a 921 Pfam PF12902 Ferritin-like 19 244 7.8E-58 T 11-11-2016 RB4278 04b0175bfa54df9a0e2f426ba0a6745a 921 SUPERFAMILY SSF110296 510 686 9.68E-29 T 11-11-2016 RB4278 04b0175bfa54df9a0e2f426ba0a6745a 921 SUPERFAMILY SSF47240 14 86 1.18E-8 T 11-11-2016 IPR009078 Ferritin-like superfamily RB8580 b4f70b14a788ca4d67773ca3e71918f8 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 6.2E-13 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RB8580 b4f70b14a788ca4d67773ca3e71918f8 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 94 1.1E-13 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RB8580 b4f70b14a788ca4d67773ca3e71918f8 113 SUPERFAMILY SSF69754 1 105 4.58E-20 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RB8580 b4f70b14a788ca4d67773ca3e71918f8 113 Gene3D G3DSA:3.30.160.100 1 97 4.1E-17 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RB3966 4c98a0d1083ef68b9509ed34dec20b60 85 Pfam PF11755 Protein of unknown function (DUF3311) 23 83 4.5E-18 T 11-11-2016 IPR021741 Protein of unknown function DUF3311 RB5725 13ac5be079f4df0405766dff16247514 246 Pfam PF01138 3' exoribonuclease family, domain 1 13 141 8.4E-21 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5725 13ac5be079f4df0405766dff16247514 246 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 7 243 2.0E-96 T 11-11-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RB5725 13ac5be079f4df0405766dff16247514 246 ProSitePatterns PS01277 Ribonuclease PH signature. 118 130 - T 11-11-2016 IPR018336 Ribonuclease PH, conserved site RB5725 13ac5be079f4df0405766dff16247514 246 SUPERFAMILY SSF55666 162 242 1.06E-18 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5725 13ac5be079f4df0405766dff16247514 246 Gene3D G3DSA:3.30.230.70 5 241 2.2E-28 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB5725 13ac5be079f4df0405766dff16247514 246 SUPERFAMILY SSF54211 8 142 4.05E-36 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB5725 13ac5be079f4df0405766dff16247514 246 Hamap MF_00564 Ribonuclease PH [rph]. 4 244 41.923 T 11-11-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RB5725 13ac5be079f4df0405766dff16247514 246 Pfam PF03725 3' exoribonuclease family, domain 2 165 229 4.8E-10 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RB11515 fdca0990deee220cdb58b14ab51cfa63 74 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 1 72 3.4E-29 T 11-11-2016 IPR019882 Conserved hypothetical protein CHP03643 RB11515 fdca0990deee220cdb58b14ab51cfa63 74 Gene3D G3DSA:3.90.940.20 10 41 4.8E-4 T 11-11-2016 IPR000783 RNA polymerase, subunit H/Rpb5 C-terminal GO:0003677|GO:0003899|GO:0006351 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RB11515 fdca0990deee220cdb58b14ab51cfa63 74 Pfam PF10985 Protein of unknown function (DUF2805) 2 71 3.6E-29 T 11-11-2016 IPR019882 Conserved hypothetical protein CHP03643 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 SMART SM00448 31 142 3.8E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 185 205 8.8E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 168 185 8.8E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 Pfam PF02954 Bacterial regulatory protein, Fis family 166 201 6.5E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 Pfam PF00072 Response regulator receiver domain 33 140 3.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 Gene3D G3DSA:1.10.10.60 160 203 9.5E-24 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 Gene3D G3DSA:3.40.50.2300 32 141 5.2E-29 T 11-11-2016 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 SUPERFAMILY SSF46689 126 201 7.17E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB12952 e71dd31eb32474f9a039a30d5187b9ba 221 SUPERFAMILY SSF52172 32 144 1.28E-30 T 11-11-2016 IPR011006 CheY-like superfamily RB6391 6e3f4cc064d854489eb838d40f59fd58 577 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 239 412 1.1E-32 T 11-11-2016 IPR017039 Virulence factor BrkB RB6391 6e3f4cc064d854489eb838d40f59fd58 577 Pfam PF03631 Virulence factor BrkB 212 413 3.7E-37 T 11-11-2016 IPR017039 Virulence factor BrkB RB9879 39410e70c8796018e671b17871191190 245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 133 9.2E-7 T 11-11-2016 IPR000014 PAS domain RB9879 39410e70c8796018e671b17871191190 245 Pfam PF08448 PAS fold 31 132 3.7E-19 T 11-11-2016 IPR013656 PAS fold-4 RB9879 39410e70c8796018e671b17871191190 245 SUPERFAMILY SSF46689 193 242 1.21E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9879 39410e70c8796018e671b17871191190 245 SMART SM00091 18 86 3.0E-4 T 11-11-2016 IPR000014 PAS domain RB9879 39410e70c8796018e671b17871191190 245 SMART SM00342 157 240 9.0E-28 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB9879 39410e70c8796018e671b17871191190 245 SUPERFAMILY SSF46689 142 191 3.09E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9879 39410e70c8796018e671b17871191190 245 SUPERFAMILY SSF55785 23 128 5.41E-13 T 11-11-2016 IPR000014 PAS domain RB9879 39410e70c8796018e671b17871191190 245 Pfam PF12833 Helix-turn-helix domain 163 242 2.2E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB9879 39410e70c8796018e671b17871191190 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 4.4E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB9879 39410e70c8796018e671b17871191190 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 4.4E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB9879 39410e70c8796018e671b17871191190 245 Gene3D G3DSA:1.10.10.60 194 243 5.0E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9879 39410e70c8796018e671b17871191190 245 Gene3D G3DSA:1.10.10.60 137 193 1.9E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9879 39410e70c8796018e671b17871191190 245 Gene3D G3DSA:3.30.450.20 22 125 9.3E-12 T 11-11-2016 RB9879 39410e70c8796018e671b17871191190 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 236 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB8407 33babe978bc48a9963a00df6711e57b5 281 Gene3D G3DSA:3.60.10.10 205 266 1.1E-4 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB8407 33babe978bc48a9963a00df6711e57b5 281 SUPERFAMILY SSF56219 34 274 3.01E-41 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB8407 33babe978bc48a9963a00df6711e57b5 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 47 263 9.1E-21 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB8407 33babe978bc48a9963a00df6711e57b5 281 Gene3D G3DSA:3.60.10.10 44 204 9.7E-18 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 92 111 3.3E-17 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 316 339 3.3E-17 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 176 187 3.3E-17 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 306 315 3.3E-17 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 82 104 5.3E-21 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 175 192 5.3E-21 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 332 346 5.3E-21 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 121 130 5.3E-21 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 310 315 5.3E-21 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 206 349 4.5E-10 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 Gene3D G3DSA:3.40.50.1370 45 183 7.1E-37 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 Gene3D G3DSA:3.40.50.1370 184 336 1.7E-20 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 50 187 7.7E-32 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 92 99 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB13301 7ba0b7749cc5019fb5636bfc28ab2494 360 SUPERFAMILY SSF53671 46 353 2.36E-59 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB9283 8a59a3afac2b20197614a411ab3ade79 336 Pfam PF00494 Squalene/phytoene synthase 20 297 5.3E-91 T 11-11-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RB9283 8a59a3afac2b20197614a411ab3ade79 336 Gene3D G3DSA:1.10.600.10 6 304 5.6E-72 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB9283 8a59a3afac2b20197614a411ab3ade79 336 SUPERFAMILY SSF48576 11 310 1.4E-71 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB9283 8a59a3afac2b20197614a411ab3ade79 336 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 154 169 - T 11-11-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RB8117 5ccbb24a37436e4b150ecdec102c1703 625 Pfam PF01943 Polysaccharide biosynthesis protein 125 429 1.6E-13 T 11-11-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RB1732 225fb5f7c2d224b0898bf267cb48c9e6 303 SUPERFAMILY SSF56317 54 301 1.57E-52 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB1732 225fb5f7c2d224b0898bf267cb48c9e6 303 Gene3D G3DSA:3.60.110.10 54 301 1.8E-55 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB1732 225fb5f7c2d224b0898bf267cb48c9e6 303 Pfam PF00795 Carbon-nitrogen hydrolase 56 300 8.5E-41 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB12197 075807ba61b20a127e40e8de8759fc2f 176 Gene3D G3DSA:3.10.20.80 14 85 6.4E-32 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RB12197 075807ba61b20a127e40e8de8759fc2f 176 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 92 176 3.3E-31 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RB12197 075807ba61b20a127e40e8de8759fc2f 176 ProSitePatterns PS00938 Initiation factor 3 signature. 69 82 - T 11-11-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RB12197 075807ba61b20a127e40e8de8759fc2f 176 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 84 4.6E-30 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RB12197 075807ba61b20a127e40e8de8759fc2f 176 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 18 176 1.2E-50 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RB12197 075807ba61b20a127e40e8de8759fc2f 176 SUPERFAMILY SSF55200 91 176 4.84E-28 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RB12197 075807ba61b20a127e40e8de8759fc2f 176 SUPERFAMILY SSF54364 16 85 5.62E-26 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RB12197 075807ba61b20a127e40e8de8759fc2f 176 Gene3D G3DSA:3.30.110.10 89 176 7.6E-32 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RB12197 075807ba61b20a127e40e8de8759fc2f 176 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 11 176 24.376 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RB10993 17552d20530e6d394375b06ee20339de 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 59 236 1.1E-24 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10993 17552d20530e6d394375b06ee20339de 239 SUPERFAMILY SSF88946 41 143 2.2E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10993 17552d20530e6d394375b06ee20339de 239 Gene3D G3DSA:1.10.1740.10 45 150 1.9E-16 T 11-11-2016 RB10993 17552d20530e6d394375b06ee20339de 239 SUPERFAMILY SSF88659 170 238 3.74E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10993 17552d20530e6d394375b06ee20339de 239 Pfam PF08281 Sigma-70, region 4 182 234 2.4E-13 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10993 17552d20530e6d394375b06ee20339de 239 TIGRFAM TIGR02984 Sig-70_plancto1: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 53 238 5.4E-76 T 11-11-2016 IPR014326 RNA polymerase sigma-70 factor, Planctomycetaceae RB10993 17552d20530e6d394375b06ee20339de 239 Gene3D G3DSA:1.10.10.10 177 238 3.3E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10993 17552d20530e6d394375b06ee20339de 239 Pfam PF04542 Sigma-70 region 2 64 134 1.4E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7087 9228f7e229ef1e0d6c22b7241a4f21ad 187 SUPERFAMILY SSF52507 4 178 9.68E-52 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RB7087 9228f7e229ef1e0d6c22b7241a4f21ad 187 Pfam PF02441 Flavoprotein 7 132 1.6E-29 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RB7087 9228f7e229ef1e0d6c22b7241a4f21ad 187 Gene3D G3DSA:3.40.50.1950 4 182 6.6E-55 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RB4151 74117afd89895835dd21712abd265806 366 Gene3D G3DSA:3.40.50.300 239 334 5.1E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4151 74117afd89895835dd21712abd265806 366 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 144 5.8E-16 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RB4151 74117afd89895835dd21712abd265806 366 SUPERFAMILY SSF160246 38 142 4.58E-14 T 11-11-2016 RB5028 07262d222531c5897a64081224d86041 1813 Gene3D G3DSA:3.90.1580.10 1535 1625 5.6E-42 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB5028 07262d222531c5897a64081224d86041 1813 Gene3D G3DSA:3.90.1580.10 1665 1806 5.6E-42 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB5028 07262d222531c5897a64081224d86041 1813 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 53 76 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB5028 07262d222531c5897a64081224d86041 1813 Pfam PF03781 Sulfatase-modifying factor enzyme 1 1549 1803 7.0E-37 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB5028 07262d222531c5897a64081224d86041 1813 Gene3D G3DSA:3.30.200.20 7 155 9.4E-27 T 11-11-2016 RB5028 07262d222531c5897a64081224d86041 1813 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 165 177 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB5028 07262d222531c5897a64081224d86041 1813 Gene3D G3DSA:1.10.510.10 156 301 8.8E-38 T 11-11-2016 RB5028 07262d222531c5897a64081224d86041 1813 SMART SM00220 47 307 4.1E-45 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB5028 07262d222531c5897a64081224d86041 1813 Gene3D G3DSA:3.40.50.300 391 520 1.5E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5028 07262d222531c5897a64081224d86041 1813 SUPERFAMILY SSF52540 377 583 4.34E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5028 07262d222531c5897a64081224d86041 1813 SUPERFAMILY SSF56112 37 301 1.31E-67 T 11-11-2016 IPR011009 Protein kinase-like domain RB5028 07262d222531c5897a64081224d86041 1813 SUPERFAMILY SSF56436 1665 1805 2.59E-46 T 11-11-2016 IPR016187 C-type lectin fold RB5028 07262d222531c5897a64081224d86041 1813 SUPERFAMILY SSF56436 1550 1625 2.59E-46 T 11-11-2016 IPR016187 C-type lectin fold RB5028 07262d222531c5897a64081224d86041 1813 Pfam PF00069 Protein kinase domain 47 300 5.6E-42 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1854 3bffa5d7c645f07ed37e54a4115390f3 703 Gene3D G3DSA:3.40.50.880 215 477 8.6E-43 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB1854 3bffa5d7c645f07ed37e54a4115390f3 703 Pfam PF06283 Trehalose utilisation 220 463 8.6E-32 T 11-11-2016 IPR029010 ThuA-like domain RB1854 3bffa5d7c645f07ed37e54a4115390f3 703 Pfam PF06439 Domain of Unknown Function (DUF1080) 519 700 3.8E-41 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB1854 3bffa5d7c645f07ed37e54a4115390f3 703 SUPERFAMILY SSF52317 217 336 3.43E-41 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB1854 3bffa5d7c645f07ed37e54a4115390f3 703 SUPERFAMILY SSF52317 365 475 3.43E-41 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB7292 0a45f821bf56d47972b3ad05a7880d5f 256 Gene3D G3DSA:3.60.15.10 5 255 3.6E-40 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB7292 0a45f821bf56d47972b3ad05a7880d5f 256 SUPERFAMILY SSF56281 5 254 1.14E-39 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB7292 0a45f821bf56d47972b3ad05a7880d5f 256 Pfam PF12706 Beta-lactamase superfamily domain 32 226 2.9E-19 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB344 8d3c5eec1a8504ddffe49df6482d921d 700 SUPERFAMILY SSF51905 29 322 3.24E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB344 8d3c5eec1a8504ddffe49df6482d921d 700 Pfam PF12831 FAD dependent oxidoreductase 33 540 1.7E-141 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB344 8d3c5eec1a8504ddffe49df6482d921d 700 Gene3D G3DSA:3.50.50.60 28 202 3.6E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00458 Haem peroxidase superfamily signature 423 438 3.3E-18 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00458 Haem peroxidase superfamily signature 259 276 3.3E-18 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00458 Haem peroxidase superfamily signature 277 289 3.3E-18 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00458 Haem peroxidase superfamily signature 363 378 3.3E-18 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00458 Haem peroxidase superfamily signature 199 213 3.3E-18 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 ProSitePatterns PS00436 Peroxidases active site signature. 199 210 - T 11-11-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 363 373 - T 11-11-2016 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 RB3010 cf43da0c33d316e82519196e775281ac 857 Gene3D G3DSA:1.10.420.10 695 820 5.5E-44 T 11-11-2016 RB3010 cf43da0c33d316e82519196e775281ac 857 SUPERFAMILY SSF48113 537 844 5.01E-108 T 11-11-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 124 845 0.0 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RB3010 cf43da0c33d316e82519196e775281ac 857 Pfam PF00141 Peroxidase 178 502 2.0E-48 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 Pfam PF00141 Peroxidase 509 818 1.1E-36 T 11-11-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 SUPERFAMILY SSF48113 131 535 5.89E-156 T 11-11-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB3010 cf43da0c33d316e82519196e775281ac 857 Gene3D G3DSA:1.10.520.10 539 694 3.1E-64 T 11-11-2016 RB3010 cf43da0c33d316e82519196e775281ac 857 Gene3D G3DSA:1.10.520.10 823 844 3.1E-64 T 11-11-2016 RB3010 cf43da0c33d316e82519196e775281ac 857 Gene3D G3DSA:1.10.520.10 156 310 1.3E-76 T 11-11-2016 RB3010 cf43da0c33d316e82519196e775281ac 857 Gene3D G3DSA:1.10.520.10 343 355 1.3E-76 T 11-11-2016 RB3010 cf43da0c33d316e82519196e775281ac 857 Hamap MF_01961 Catalase-peroxidase [katG]. 110 845 41.868 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 371 394 1.3E-44 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 586 612 1.3E-44 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 176 201 1.3E-44 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 161 174 1.3E-44 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RB3010 cf43da0c33d316e82519196e775281ac 857 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 135 157 1.3E-44 T 11-11-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RB3010 cf43da0c33d316e82519196e775281ac 857 Gene3D G3DSA:1.10.420.10 415 514 8.6E-49 T 11-11-2016 RB3010 cf43da0c33d316e82519196e775281ac 857 Gene3D G3DSA:1.10.420.10 356 378 8.6E-49 T 11-11-2016 RB9533 36f34276600e74d3c7046820130fca7b 491 SMART SM00155 404 431 1.8E-5 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RB9533 36f34276600e74d3c7046820130fca7b 491 SMART SM00155 228 255 2.6 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RB9533 36f34276600e74d3c7046820130fca7b 491 Pfam PF13091 PLD-like domain 142 288 8.1E-12 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RB9533 36f34276600e74d3c7046820130fca7b 491 Pfam PF13091 PLD-like domain 334 450 2.9E-23 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RB9533 36f34276600e74d3c7046820130fca7b 491 SUPERFAMILY SSF56024 281 477 3.36E-39 T 11-11-2016 RB9533 36f34276600e74d3c7046820130fca7b 491 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 22 491 1.3E-106 T 11-11-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 RB9533 36f34276600e74d3c7046820130fca7b 491 SUPERFAMILY SSF56024 107 320 2.1E-40 T 11-11-2016 RB9533 36f34276600e74d3c7046820130fca7b 491 Gene3D G3DSA:3.30.870.10 333 466 5.2E-32 T 11-11-2016 RB9533 36f34276600e74d3c7046820130fca7b 491 Pfam PF13396 Phospholipase_D-nuclease N-terminal 28 66 2.5E-9 T 11-11-2016 IPR027379 Cardiolipin synthase N-terminal RB9533 36f34276600e74d3c7046820130fca7b 491 Gene3D G3DSA:3.30.870.10 119 321 1.8E-35 T 11-11-2016 RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 54 414 1.4E-100 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 PIRSF PIRSF005962 37 427 3.1E-133 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 Pfam PF01546 Peptidase family M20/M25/M40 111 420 4.7E-29 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 SUPERFAMILY SSF55031 221 334 2.24E-24 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 Pfam PF07687 Peptidase dimerisation domain 225 318 3.5E-7 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 Gene3D G3DSA:3.30.70.360 220 336 1.7E-31 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 SUPERFAMILY SSF53187 337 422 5.86E-66 T 11-11-2016 RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 SUPERFAMILY SSF53187 43 236 5.86E-66 T 11-11-2016 RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 Gene3D G3DSA:3.40.630.10 337 424 6.3E-82 T 11-11-2016 RB4484 bdb4ad8a71cce05c69a5f7856fa676fa 432 Gene3D G3DSA:3.40.630.10 31 217 6.3E-82 T 11-11-2016 RB293 b46fb59f8fd12b7e0d970b54cb7463bf 211 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 14 207 19.117 T 11-11-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RB293 b46fb59f8fd12b7e0d970b54cb7463bf 211 SUPERFAMILY SSF53448 15 204 1.63E-21 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB293 b46fb59f8fd12b7e0d970b54cb7463bf 211 Pfam PF12804 MobA-like NTP transferase domain 18 180 7.6E-30 T 11-11-2016 IPR025877 MobA-like NTP transferase RB293 b46fb59f8fd12b7e0d970b54cb7463bf 211 Gene3D G3DSA:3.90.550.10 15 204 2.1E-32 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB1013 9c85aaddba34e6d29e79224965e200b4 1355 Pfam PF13514 AAA domain 6 201 1.8E-12 T 11-11-2016 RB1013 9c85aaddba34e6d29e79224965e200b4 1355 SUPERFAMILY SSF52540 1031 1133 2.6E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1013 9c85aaddba34e6d29e79224965e200b4 1355 SUPERFAMILY SSF52540 337 361 2.6E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1013 9c85aaddba34e6d29e79224965e200b4 1355 SUPERFAMILY SSF52540 6 158 2.6E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1013 9c85aaddba34e6d29e79224965e200b4 1355 Gene3D G3DSA:3.40.1140.10 1055 1124 7.8E-16 T 11-11-2016 RB1013 9c85aaddba34e6d29e79224965e200b4 1355 Gene3D G3DSA:3.40.1140.10 4 91 7.8E-16 T 11-11-2016 RB3877 94d1ef6262ab76df6ee068ab450624ad 516 Gene3D G3DSA:3.30.1120.10 412 468 5.7E-11 T 11-11-2016 RB3877 94d1ef6262ab76df6ee068ab450624ad 516 Gene3D G3DSA:3.40.720.10 25 411 9.8E-90 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3877 94d1ef6262ab76df6ee068ab450624ad 516 Pfam PF00884 Sulfatase 27 357 7.4E-55 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3877 94d1ef6262ab76df6ee068ab450624ad 516 SUPERFAMILY SSF53649 23 504 3.49E-115 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3877 94d1ef6262ab76df6ee068ab450624ad 516 Pfam PF14707 C-terminal region of aryl-sulfatase 399 495 9.3E-8 T 11-11-2016 RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 Gene3D G3DSA:2.130.10.130 699 928 2.2E-12 T 11-11-2016 RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 Gene3D G3DSA:2.130.10.130 528 660 1.1E-10 T 11-11-2016 RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 SUPERFAMILY SSF48452 84 198 1.45E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 SUPERFAMILY SSF48452 229 351 1.45E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 SUPERFAMILY SSF69318 528 928 3.53E-47 T 11-11-2016 RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 786 850 1.3E-6 T 11-11-2016 RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 598 659 2.4E-12 T 11-11-2016 RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 Pfam PF07593 ASPIC and UnbV 951 1010 1.3E-11 T 11-11-2016 IPR011519 ASPIC/UnbV RB3534 d7b73e213dc362ee5e6b2c64341b3f61 1037 Gene3D G3DSA:1.25.40.10 85 293 2.8E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11497 ea2d5806ffd4bb277290d7820ac88084 245 SUPERFAMILY SSF53335 3 228 6.06E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11497 ea2d5806ffd4bb277290d7820ac88084 245 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 112 234 4.0E-40 T 11-11-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent RB11497 ea2d5806ffd4bb277290d7820ac88084 245 Gene3D G3DSA:3.40.50.150 4 119 4.7E-4 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11497 ea2d5806ffd4bb277290d7820ac88084 245 Gene3D G3DSA:3.40.50.150 181 227 4.7E-4 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2809 adff8b2e9ea4f87b6e51e02f5531fb92 226 SMART SM00567 E-Z type HEAT repeats 53 82 0.0015 T 11-11-2016 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RB2809 adff8b2e9ea4f87b6e51e02f5531fb92 226 Gene3D G3DSA:1.25.10.10 44 88 4.1E-5 T 11-11-2016 IPR011989 Armadillo-like helical RB2809 adff8b2e9ea4f87b6e51e02f5531fb92 226 Gene3D G3DSA:1.25.40.10 113 215 2.5E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2809 adff8b2e9ea4f87b6e51e02f5531fb92 226 SMART SM00028 140 173 0.39 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB2809 adff8b2e9ea4f87b6e51e02f5531fb92 226 SMART SM00028 174 207 0.062 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB2809 adff8b2e9ea4f87b6e51e02f5531fb92 226 Pfam PF03130 PBS lyase HEAT-like repeat 56 81 9.9E-5 T 11-11-2016 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RB2809 adff8b2e9ea4f87b6e51e02f5531fb92 226 SUPERFAMILY SSF48371 43 90 1.63E-6 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB2809 adff8b2e9ea4f87b6e51e02f5531fb92 226 SUPERFAMILY SSF48452 120 223 8.1E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6656 bae77152a5430fde4809296c480cead2 463 SUPERFAMILY SSF54197 300 452 2.46E-28 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 RB6656 bae77152a5430fde4809296c480cead2 463 Gene3D G3DSA:3.30.428.10 142 293 6.6E-39 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 RB6656 bae77152a5430fde4809296c480cead2 463 Gene3D G3DSA:3.30.428.10 299 452 4.9E-32 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 RB6656 bae77152a5430fde4809296c480cead2 463 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 99 296 2.9E-14 T 11-11-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 RB6656 bae77152a5430fde4809296c480cead2 463 SUPERFAMILY SSF54197 100 296 3.91E-43 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 RB6472 b368279d004fb5e9fa97ce5141e58b9f 532 Pfam PF00953 Glycosyl transferase family 4 92 246 2.1E-35 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 RB4862 eb01d31db38cd183daf05ffe603bb54f 449 SMART SM00710 197 219 290.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4862 eb01d31db38cd183daf05ffe603bb54f 449 SMART SM00710 222 251 76.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4862 eb01d31db38cd183daf05ffe603bb54f 449 SMART SM00710 256 282 3100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4862 eb01d31db38cd183daf05ffe603bb54f 449 SMART SM00710 149 170 1200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4862 eb01d31db38cd183daf05ffe603bb54f 449 SMART SM00710 172 194 130.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4862 eb01d31db38cd183daf05ffe603bb54f 449 SMART SM00710 295 316 390.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4862 eb01d31db38cd183daf05ffe603bb54f 449 SMART SM00710 421 442 2300.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4862 eb01d31db38cd183daf05ffe603bb54f 449 Pfam PF12708 Pectate lyase superfamily protein 39 115 3.0E-6 T 11-11-2016 IPR024535 Pectate lyase superfamily protein RB4862 eb01d31db38cd183daf05ffe603bb54f 449 Gene3D G3DSA:2.160.20.10 38 413 2.9E-28 T 11-11-2016 IPR012334 Pectin lyase fold RB4862 eb01d31db38cd183daf05ffe603bb54f 449 Pfam PF13229 Right handed beta helix region 131 258 4.1E-11 T 11-11-2016 RB4862 eb01d31db38cd183daf05ffe603bb54f 449 SUPERFAMILY SSF51126 36 386 5.27E-30 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4862 eb01d31db38cd183daf05ffe603bb54f 449 Pfam PF05048 Periplasmic copper-binding protein (NosD) 274 430 9.7E-7 T 11-11-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain RB1357 c5a45a82d193fa73646c8ec8a78d92d2 322 SUPERFAMILY SSF55073 152 307 1.96E-41 T 11-11-2016 IPR029787 Nucleotide cyclase RB1357 c5a45a82d193fa73646c8ec8a78d92d2 322 Gene3D G3DSA:3.30.70.270 148 307 2.4E-45 T 11-11-2016 RB1357 c5a45a82d193fa73646c8ec8a78d92d2 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 302 8.9E-39 T 11-11-2016 IPR000160 GGDEF domain RB1357 c5a45a82d193fa73646c8ec8a78d92d2 322 SMART SM00267 137 306 1.2E-44 T 11-11-2016 IPR000160 GGDEF domain RB1357 c5a45a82d193fa73646c8ec8a78d92d2 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 306 4.7E-45 T 11-11-2016 IPR000160 GGDEF domain RB8763 9577c434e891132bd179b8ccd0b3d951 357 Pfam PF00092 von Willebrand factor type A domain 90 297 1.0E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8763 9577c434e891132bd179b8ccd0b3d951 357 Gene3D G3DSA:3.40.50.410 88 301 7.7E-25 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8763 9577c434e891132bd179b8ccd0b3d951 357 SUPERFAMILY SSF53300 85 302 1.34E-30 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8763 9577c434e891132bd179b8ccd0b3d951 357 Pfam PF07584 Aerotolerance regulator N-terminal 1 72 8.6E-13 T 11-11-2016 IPR024163 Aerotolerance regulator, N-terminal RB8763 9577c434e891132bd179b8ccd0b3d951 357 SMART SM00327 85 305 2.7E-14 T 11-11-2016 IPR002035 von Willebrand factor, type A RB10768 30983719c1d4d1445bf357c4115825e9 507 Gene3D G3DSA:3.40.50.150 144 369 1.8E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10768 30983719c1d4d1445bf357c4115825e9 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 166 180 6.2E-22 T 11-11-2016 RB10768 30983719c1d4d1445bf357c4115825e9 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 249 261 6.2E-22 T 11-11-2016 RB10768 30983719c1d4d1445bf357c4115825e9 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 142 158 6.2E-22 T 11-11-2016 RB10768 30983719c1d4d1445bf357c4115825e9 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 278 302 6.2E-22 T 11-11-2016 RB10768 30983719c1d4d1445bf357c4115825e9 507 Pfam PF12161 HsdM N-terminal domain 8 108 2.3E-9 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RB10768 30983719c1d4d1445bf357c4115825e9 507 Pfam PF02384 N-6 DNA Methylase 120 397 2.5E-73 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RB10768 30983719c1d4d1445bf357c4115825e9 507 SUPERFAMILY SSF53335 4 489 3.62E-121 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10768 30983719c1d4d1445bf357c4115825e9 507 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 252 258 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RB3478 bc847694d796853826ddf388f292d5b5 265 Hamap MF_01974 Methionine aminopeptidase [map]. 7 255 36.844 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RB3478 bc847694d796853826ddf388f292d5b5 265 Gene3D G3DSA:3.90.230.10 8 257 6.9E-81 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB3478 bc847694d796853826ddf388f292d5b5 265 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RB3478 bc847694d796853826ddf388f292d5b5 265 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 9 254 1.2E-81 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RB3478 bc847694d796853826ddf388f292d5b5 265 SUPERFAMILY SSF55920 5 255 1.23E-75 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB3478 bc847694d796853826ddf388f292d5b5 265 Pfam PF00557 Metallopeptidase family M24 16 246 2.0E-46 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB3478 bc847694d796853826ddf388f292d5b5 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 94 110 5.2E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase RB3478 bc847694d796853826ddf388f292d5b5 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 5.2E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase RB3478 bc847694d796853826ddf388f292d5b5 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 5.2E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase RB3478 bc847694d796853826ddf388f292d5b5 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 5.2E-21 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase RB2985 9097d41103fe5a0a39a467d7da5b8dc6 365 Pfam PF00534 Glycosyl transferases group 1 192 330 5.7E-20 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB2985 9097d41103fe5a0a39a467d7da5b8dc6 365 SUPERFAMILY SSF53756 36 362 2.83E-53 T 11-11-2016 RB2985 9097d41103fe5a0a39a467d7da5b8dc6 365 Gene3D G3DSA:3.40.50.2000 170 327 2.1E-13 T 11-11-2016 RB2985 9097d41103fe5a0a39a467d7da5b8dc6 365 Pfam PF13439 Glycosyltransferase Family 4 51 169 1.9E-10 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 ProSitePatterns PS00674 AAA-protein family signature. 390 408 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 207 692 8.8E-208 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 SUPERFAMILY SSF140990 501 695 6.8E-64 T 11-11-2016 RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 SUPERFAMILY SSF52540 247 514 6.0E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 SMART SM00382 283 422 1.3E-24 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 Pfam PF01434 Peptidase family M41 481 691 1.6E-67 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 20 722 34.732 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 Gene3D G3DSA:1.10.8.60 431 504 1.8E-25 T 11-11-2016 RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 287 419 3.3E-44 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB5566 19d6e4c1cc95ecd205816e5f34b4e5f5 728 Gene3D G3DSA:3.40.50.300 246 430 2.4E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2785 3df770937aefb16eed9f15c5e26d13d4 770 SUPERFAMILY SSF52096 324 457 8.08E-10 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB2785 3df770937aefb16eed9f15c5e26d13d4 770 SUPERFAMILY SSF52096 501 515 8.08E-10 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB2785 3df770937aefb16eed9f15c5e26d13d4 770 Gene3D G3DSA:3.90.226.10 324 518 1.1E-5 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB2785 3df770937aefb16eed9f15c5e26d13d4 770 Pfam PF01957 NfeD-like C-terminal, partner-binding 611 768 9.6E-13 T 11-11-2016 IPR002810 NfeD-like, C-terminal domain RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 Pfam PF00270 DEAD/DEAH box helicase 60 236 5.5E-21 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 Gene3D G3DSA:3.40.50.300 45 243 6.7E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 Pfam PF00271 Helicase conserved C-terminal domain 293 395 3.0E-14 T 11-11-2016 IPR001650 Helicase, C-terminal RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 SUPERFAMILY SSF52540 67 238 1.09E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 SUPERFAMILY SSF52540 269 396 1.09E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 Pfam PF08494 DEAD/H associated 639 824 1.5E-48 T 11-11-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 SMART SM00487 53 271 1.7E-16 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 46 855 0.0 T 11-11-2016 IPR026362 DEXH box helicase, DNA ligase-associated RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 Gene3D G3DSA:3.40.50.300 254 398 1.6E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 PIRSF PIRSF037307 33 859 4.7E-151 T 11-11-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 RB1577 3bc96bedbb779f428f06b16b7e59d87e 860 SMART SM00490 314 395 1.3E-12 T 11-11-2016 IPR001650 Helicase, C-terminal RB10839 b576d11c2fa1be2ac59014033decce28 515 Pfam PF13360 PQQ-like domain 297 370 1.3E-9 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB10839 b576d11c2fa1be2ac59014033decce28 515 Pfam PF13360 PQQ-like domain 141 256 1.3E-8 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB10839 b576d11c2fa1be2ac59014033decce28 515 Gene3D G3DSA:2.140.10.10 91 513 7.6E-54 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB10839 b576d11c2fa1be2ac59014033decce28 515 SMART SM00564 322 353 0.071 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10839 b576d11c2fa1be2ac59014033decce28 515 SMART SM00564 161 201 35.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10839 b576d11c2fa1be2ac59014033decce28 515 SMART SM00564 219 253 17.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10839 b576d11c2fa1be2ac59014033decce28 515 SMART SM00564 268 311 49.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10839 b576d11c2fa1be2ac59014033decce28 515 SUPERFAMILY SSF50998 119 476 9.16E-48 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB8362 2697254ad03dd8fd1d0308ca9eee3bc5 485 Gene3D G3DSA:3.60.40.10 9 253 5.9E-63 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB8362 2697254ad03dd8fd1d0308ca9eee3bc5 485 SUPERFAMILY SSF81606 9 254 2.09E-58 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB8362 2697254ad03dd8fd1d0308ca9eee3bc5 485 SMART SM00332 6 251 1.7E-25 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB8362 2697254ad03dd8fd1d0308ca9eee3bc5 485 Pfam PF13672 Protein phosphatase 2C 21 216 1.1E-12 T 11-11-2016 RB8362 2697254ad03dd8fd1d0308ca9eee3bc5 485 SMART SM00331 27 253 6.1E-27 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB5437 6111af80df6dca203950466f77a464cf 305 SUPERFAMILY SSF53167 36 301 6.81E-65 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB5437 6111af80df6dca203950466f77a464cf 305 PIRSF PIRSF000477 11 303 4.9E-76 T 11-11-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RB5437 6111af80df6dca203950466f77a464cf 305 Pfam PF01048 Phosphorylase superfamily 39 300 1.8E-46 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB5437 6111af80df6dca203950466f77a464cf 305 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 39 300 6.3E-73 T 11-11-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RB5437 6111af80df6dca203950466f77a464cf 305 Gene3D G3DSA:3.40.50.1580 18 300 2.4E-85 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB10313 05d09d4e81b56131998e61d66677f1b9 469 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 77 132 9.4E-9 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB10313 05d09d4e81b56131998e61d66677f1b9 469 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 123 143 2.7E-23 T 11-11-2016 RB10313 05d09d4e81b56131998e61d66677f1b9 469 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 95 120 2.7E-23 T 11-11-2016 RB10313 05d09d4e81b56131998e61d66677f1b9 469 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 263 289 2.7E-23 T 11-11-2016 RB10313 05d09d4e81b56131998e61d66677f1b9 469 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 262 2.7E-23 T 11-11-2016 RB10313 05d09d4e81b56131998e61d66677f1b9 469 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 331 343 2.7E-23 T 11-11-2016 RB10313 05d09d4e81b56131998e61d66677f1b9 469 Pfam PF00361 Proton-conducting membrane transporter 151 365 9.7E-42 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB2697 9b62381b022dca8e2d34f064f4b28556 508 Pfam PF07394 Protein of unknown function (DUF1501) 83 506 1.8E-155 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB2697 9b62381b022dca8e2d34f064f4b28556 508 SUPERFAMILY SSF53649 327 491 3.05E-20 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2697 9b62381b022dca8e2d34f064f4b28556 508 Gene3D G3DSA:3.40.720.10 369 491 4.7E-9 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9241 de9815819b9fa1f9d5057069c262f42e 267 SUPERFAMILY SSF53335 56 225 1.1E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9241 de9815819b9fa1f9d5057069c262f42e 267 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 59 204 1.8E-12 T 11-11-2016 IPR006342 Methyltransferase FkbM RB9241 de9815819b9fa1f9d5057069c262f42e 267 Pfam PF05050 Methyltransferase FkbM domain 62 238 1.9E-19 T 11-11-2016 IPR006342 Methyltransferase FkbM RB9241 de9815819b9fa1f9d5057069c262f42e 267 Gene3D G3DSA:3.40.50.150 56 227 2.3E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB3253 95f00c742d807794d486f4d16fb8cb1f 357 Gene3D G3DSA:3.40.50.300 36 265 1.3E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3253 95f00c742d807794d486f4d16fb8cb1f 357 Pfam PF00005 ABC transporter 59 198 4.7E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB3253 95f00c742d807794d486f4d16fb8cb1f 357 SUPERFAMILY SSF52540 35 265 2.11E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3253 95f00c742d807794d486f4d16fb8cb1f 357 SMART SM00382 68 245 9.1E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF55785 1112 1223 7.73E-25 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF55785 720 839 3.77E-6 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00388 1362 1427 1.1E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.30.450.20 1087 1209 3.7E-26 T 11-11-2016 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.30.450.20 723 839 2.0E-6 T 11-11-2016 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:1.10.155.10 213 275 3.6E-13 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 PRINTS PR00996 Glutamate methyltransferase family signature 423 437 4.0E-17 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 PRINTS PR00996 Glutamate methyltransferase family signature 271 283 4.0E-17 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 PRINTS PR00996 Glutamate methyltransferase family signature 442 465 4.0E-17 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 PRINTS PR00996 Glutamate methyltransferase family signature 311 331 4.0E-17 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 PRINTS PR00996 Glutamate methyltransferase family signature 234 247 4.0E-17 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:1.10.287.130 1357 1423 1.8E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00086 918 960 4.3E-8 T 11-11-2016 IPR001610 PAC motif RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00086 1177 1217 0.024 T 11-11-2016 IPR001610 PAC motif RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00086 1300 1342 0.0027 T 11-11-2016 IPR001610 PAC motif RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00086 1047 1089 2.4 T 11-11-2016 IPR001610 PAC motif RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF52172 1621 1738 2.7E-32 T 11-11-2016 IPR011006 CheY-like superfamily RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF00989 PAS fold 1102 1214 7.9E-16 T 11-11-2016 IPR013767 PAS fold GO:0006355 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF01739 CheR methyltransferase, SAM binding domain 280 479 2.1E-46 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00138 212 483 8.0E-71 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF03705 CheR methyltransferase, all-alpha domain 217 265 4.6E-12 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF47384 1347 1428 6.08E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF53335 278 480 9.37E-47 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00091 972 1038 0.01 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00091 846 912 8.7E-8 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00091 1101 1167 9.0E-9 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00091 733 798 36.0 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.30.450.20 957 1086 3.1E-14 T 11-11-2016 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF08447 PAS fold 1251 1336 4.4E-19 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF08447 PAS fold 872 953 8.4E-19 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF01339 CheB methylesterase 13 188 2.2E-44 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1362 1427 1.9E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00387 1474 1587 1.2E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1475 1583 1.9E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF52738 9 192 1.96E-45 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF00072 Response regulator receiver domain 1622 1735 5.7E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF55785 851 962 5.37E-25 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.40.50.2300 1622 1738 2.8E-33 T 11-11-2016 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF55785 956 1080 1.41E-13 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.30.565.10 1428 1583 2.2E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF13596 PAS domain 735 839 8.7E-22 T 11-11-2016 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.40.50.150 278 481 2.6E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1100 1223 2.7E-28 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 842 967 2.8E-17 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Pfam PF08448 PAS fold 984 1090 4.9E-7 T 11-11-2016 IPR013656 PAS fold-4 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.30.450.20 840 956 1.8E-29 T 11-11-2016 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.30.450.20 1210 1356 2.6E-27 T 11-11-2016 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF55785 1242 1338 2.44E-15 T 11-11-2016 IPR000014 PAS domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SMART SM00448 1619 1735 7.0E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF55874 1416 1582 1.83E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 SUPERFAMILY SSF47757 212 280 1.83E-12 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RB10924 cb01c6f8c3e22b0e38ddeb4af5aa480c 1739 Gene3D G3DSA:3.40.50.180 6 192 2.3E-50 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 RB10112 32d063a2a7c690bc114b5622619a8cb7 262 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 254 48.877 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 RB10112 32d063a2a7c690bc114b5622619a8cb7 262 SUPERFAMILY SSF51366 1 255 7.06E-85 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB10112 32d063a2a7c690bc114b5622619a8cb7 262 Gene3D G3DSA:3.20.20.70 5 255 1.5E-107 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB10112 32d063a2a7c690bc114b5622619a8cb7 262 Pfam PF00977 Histidine biosynthesis protein 5 236 1.4E-91 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 RB10112 32d063a2a7c690bc114b5622619a8cb7 262 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 254 1.8E-114 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 RB10442 998bcf9664662460bfd1a3a4177c21ff 628 SUPERFAMILY SSF102114 212 524 4.84E-28 T 11-11-2016 RB10442 998bcf9664662460bfd1a3a4177c21ff 628 Pfam PF13282 Domain of unknown function (DUF4070) 422 575 4.0E-16 T 11-11-2016 IPR025274 Domain of unknown function DUF4070 RB10442 998bcf9664662460bfd1a3a4177c21ff 628 Pfam PF04055 Radical SAM superfamily 235 388 1.2E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB10442 998bcf9664662460bfd1a3a4177c21ff 628 Pfam PF02310 B12 binding domain 92 189 6.0E-9 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RB10442 998bcf9664662460bfd1a3a4177c21ff 628 SMART SM00729 230 443 5.3E-11 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB10442 998bcf9664662460bfd1a3a4177c21ff 628 Gene3D G3DSA:3.80.30.20 230 442 4.4E-31 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB8243 856e9ca550e6591333bd0dbfcbf3252e 110 Pfam PF07621 Protein of unknown function (DUF1582) 65 93 5.0E-13 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB8565 0a0f988e2b615a94073a07a6ddfe5bdf 305 SUPERFAMILY SSF51658 15 287 8.71E-33 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8565 0a0f988e2b615a94073a07a6ddfe5bdf 305 Pfam PF01261 Xylose isomerase-like TIM barrel 22 206 2.9E-14 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8565 0a0f988e2b615a94073a07a6ddfe5bdf 305 Gene3D G3DSA:3.20.20.150 17 284 7.1E-25 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12513 67a7286f724ad764dff33cac3188ba45 811 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 266 2.9E-40 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RB12513 67a7286f724ad764dff33cac3188ba45 811 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 548 790 2.2E-33 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RB12513 67a7286f724ad764dff33cac3188ba45 811 SUPERFAMILY SSF117143 94 189 1.7E-22 T 11-11-2016 RB12513 67a7286f724ad764dff33cac3188ba45 811 SUPERFAMILY SSF117143 295 314 1.7E-22 T 11-11-2016 RB12513 67a7286f724ad764dff33cac3188ba45 811 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 731 809 4.8E-11 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RB12513 67a7286f724ad764dff33cac3188ba45 811 SUPERFAMILY SSF117143 511 771 1.96E-34 T 11-11-2016 RB12513 67a7286f724ad764dff33cac3188ba45 811 Pfam PF07559 Flagellar basal body protein FlaE 580 690 4.1E-6 T 11-11-2016 IPR011491 Flagellar hook protein FlgE RB12513 67a7286f724ad764dff33cac3188ba45 811 Pfam PF00460 Flagella basal body rod protein 7 37 1.9E-9 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RB4724 e146e20ffde33d88e723e0ed8a38a3b3 211 SUPERFAMILY SSF46689 7 77 3.84E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4724 e146e20ffde33d88e723e0ed8a38a3b3 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 1.5E-13 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4724 e146e20ffde33d88e723e0ed8a38a3b3 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 9.6E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4724 e146e20ffde33d88e723e0ed8a38a3b3 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 9.6E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4724 e146e20ffde33d88e723e0ed8a38a3b3 211 Gene3D G3DSA:1.10.357.10 5 160 6.5E-25 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RB2676 2defe8230a37fbdda25a4eab4b22390c 276 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 9 257 1.3E-55 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2676 2defe8230a37fbdda25a4eab4b22390c 276 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 8 262 35.066 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2676 2defe8230a37fbdda25a4eab4b22390c 276 Gene3D G3DSA:3.30.70.660 114 264 8.5E-44 T 11-11-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2676 2defe8230a37fbdda25a4eab4b22390c 276 PIRSF PIRSF001430 7 274 2.2E-72 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2676 2defe8230a37fbdda25a4eab4b22390c 276 SUPERFAMILY SSF55120 8 270 3.6E-78 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2676 2defe8230a37fbdda25a4eab4b22390c 276 Gene3D G3DSA:3.30.70.580 8 108 1.4E-30 T 11-11-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2676 2defe8230a37fbdda25a4eab4b22390c 276 Pfam PF01416 tRNA pseudouridine synthase 14 104 4.6E-8 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2676 2defe8230a37fbdda25a4eab4b22390c 276 Pfam PF01416 tRNA pseudouridine synthase 150 263 2.4E-30 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB11906 e359390f8555537040b66dacaa51a000 154 Pfam PF13673 Acetyltransferase (GNAT) domain 60 149 3.2E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB11906 e359390f8555537040b66dacaa51a000 154 SUPERFAMILY SSF55729 17 150 2.57E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB11906 e359390f8555537040b66dacaa51a000 154 Gene3D G3DSA:3.40.630.30 21 150 2.2E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB1709 0239662e539f00a9af8f839309f268ff 132 Pfam PF07628 Protein of unknown function (DUF1589) 53 125 6.5E-6 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Gene3D G3DSA:2.120.10.30 93 132 4.9E-51 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Gene3D G3DSA:2.120.10.30 180 501 4.9E-51 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Gene3D G3DSA:1.10.760.10 1009 1101 3.9E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Gene3D G3DSA:1.10.760.10 1136 1161 3.9E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 SUPERFAMILY SSF50952 180 389 1.22E-12 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 SUPERFAMILY SSF50952 416 480 1.22E-12 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 SUPERFAMILY SSF50952 92 132 1.22E-12 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1025 1160 2.1E-30 T 11-11-2016 IPR013427 Haem-binding domain, putative RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Pfam PF13646 HEAT repeats 593 676 7.6E-7 T 11-11-2016 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 SUPERFAMILY SSF48371 518 550 8.64E-15 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 SUPERFAMILY SSF48371 583 737 8.64E-15 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 SUPERFAMILY SSF48371 822 992 8.64E-15 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 SUPERFAMILY SSF46626 1023 1092 1.33E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 SUPERFAMILY SSF46626 1136 1162 1.33E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Pfam PF07995 Glucose / Sorbosone dehydrogenase 246 421 9.8E-8 T 11-11-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Pfam PF00034 Cytochrome c 1028 1161 4.5E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Gene3D G3DSA:1.25.10.10 502 545 3.5E-15 T 11-11-2016 IPR011989 Armadillo-like helical RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Gene3D G3DSA:1.25.10.10 824 970 1.6E-7 T 11-11-2016 IPR011989 Armadillo-like helical RB1988 3d2137f2cbfff5a20776c72a9fe11580 1174 Gene3D G3DSA:1.25.10.10 582 808 3.5E-15 T 11-11-2016 IPR011989 Armadillo-like helical RB6042 2ff697348330768b7113f61aff82dbf2 415 Gene3D G3DSA:3.30.465.10 324 397 7.7E-14 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RB6042 2ff697348330768b7113f61aff82dbf2 415 SUPERFAMILY SSF56176 329 400 7.63E-12 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RB6042 2ff697348330768b7113f61aff82dbf2 415 Gene3D G3DSA:3.10.580.10 260 322 1.2E-6 T 11-11-2016 RB6042 2ff697348330768b7113f61aff82dbf2 415 Pfam PF03471 Transporter associated domain 332 397 2.3E-11 T 11-11-2016 IPR005170 Transporter-associated domain RB6042 2ff697348330768b7113f61aff82dbf2 415 SMART SM01091 331 408 4.2E-11 T 11-11-2016 IPR005170 Transporter-associated domain RB6042 2ff697348330768b7113f61aff82dbf2 415 SUPERFAMILY SSF54631 230 316 7.93E-9 T 11-11-2016 RB6042 2ff697348330768b7113f61aff82dbf2 415 Pfam PF01595 Domain of unknown function DUF21 13 179 1.7E-22 T 11-11-2016 IPR002550 Domain of unknown function DUF21 RB1300 d4894fbc31862ce08cc13011d96866d4 263 Pfam PF07596 Protein of unknown function (DUF1559) 152 222 7.7E-15 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB1300 d4894fbc31862ce08cc13011d96866d4 263 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 105 128 - T 11-11-2016 IPR007087 Zinc finger, C2H2 GO:0046872 RB6523 bdfc1e3b03a12861d03d167b9b2aa7d0 417 SUPERFAMILY SSF53756 5 400 1.57E-16 T 11-11-2016 RB6523 bdfc1e3b03a12861d03d167b9b2aa7d0 417 Pfam PF13692 Glycosyl transferases group 1 223 338 2.4E-6 T 11-11-2016 RB9687 4a9cac086995577db649c425ee71a6dc 357 Pfam PF06812 ImpA, N-terminal, type VI secretion system 11 133 1.8E-32 T 11-11-2016 IPR010657 ImpA, N-terminal RB9687 4a9cac086995577db649c425ee71a6dc 357 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 5 347 2.3E-68 T 11-11-2016 IPR017740 Type VI secretion system-associated, ImpA RB8359 fe2121b62a7f00053f337a14a6d51be7 91 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 1 84 7.2E-24 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RB8359 fe2121b62a7f00053f337a14a6d51be7 91 SUPERFAMILY SSF141000 1 83 9.42E-25 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RB8359 fe2121b62a7f00053f337a14a6d51be7 91 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 1 85 19.552 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RB8359 fe2121b62a7f00053f337a14a6d51be7 91 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 9 80 9.0E-18 T 11-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RB11470 f696193022aef7d45402eb93dab3789d 667 Pfam PF01161 Phosphatidylethanolamine-binding protein 543 665 3.1E-14 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein RB11470 f696193022aef7d45402eb93dab3789d 667 Gene3D G3DSA:3.90.280.10 522 667 6.7E-31 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein RB11470 f696193022aef7d45402eb93dab3789d 667 SUPERFAMILY SSF49777 523 667 2.88E-24 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein RB11470 f696193022aef7d45402eb93dab3789d 667 Pfam PF14240 YHYH protein 230 325 1.7E-12 T 11-11-2016 IPR025924 YHYH domain RB8834 749dc0bdbc40af287808807462cc15d3 331 Pfam PF01545 Cation efflux family 42 232 6.1E-45 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RB8834 749dc0bdbc40af287808807462cc15d3 331 SUPERFAMILY SSF161111 39 233 1.24E-54 T 11-11-2016 RB8834 749dc0bdbc40af287808807462cc15d3 331 Gene3D G3DSA:1.20.1510.10 39 232 3.1E-55 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain RB8834 749dc0bdbc40af287808807462cc15d3 331 SUPERFAMILY SSF160240 241 313 1.31E-6 T 11-11-2016 RB8834 749dc0bdbc40af287808807462cc15d3 331 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 39 311 9.3E-75 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RB7560 02c2d9b41711f39fa23f62f940cd70f3 530 SUPERFAMILY SSF53649 52 478 2.04E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7560 02c2d9b41711f39fa23f62f940cd70f3 530 Gene3D G3DSA:3.30.1120.10 416 479 1.1E-13 T 11-11-2016 RB7560 02c2d9b41711f39fa23f62f940cd70f3 530 Gene3D G3DSA:3.40.720.10 52 415 1.0E-90 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7560 02c2d9b41711f39fa23f62f940cd70f3 530 Pfam PF00884 Sulfatase 54 374 1.2E-63 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB7560 02c2d9b41711f39fa23f62f940cd70f3 530 ProSitePatterns PS00523 Sulfatases signature 1. 100 112 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB4603 46c06c8968150547c446cf0e936f0902 353 Gene3D G3DSA:3.40.630.30 3 73 1.0E-6 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB4603 46c06c8968150547c446cf0e936f0902 353 SUPERFAMILY SSF55729 3 71 2.17E-7 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB4784 6567ba9164fd08e76c2eac922d42041d 566 Gene3D G3DSA:3.40.720.10 81 484 8.6E-90 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4784 6567ba9164fd08e76c2eac922d42041d 566 Gene3D G3DSA:3.30.1120.10 489 559 1.1E-10 T 11-11-2016 RB4784 6567ba9164fd08e76c2eac922d42041d 566 SUPERFAMILY SSF53649 82 555 6.98E-104 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB4784 6567ba9164fd08e76c2eac922d42041d 566 Pfam PF00884 Sulfatase 84 464 1.6E-57 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB12167 d614e42be05245a4b38eb94206e38bd4 259 Gene3D G3DSA:3.20.20.150 4 257 1.3E-23 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12167 d614e42be05245a4b38eb94206e38bd4 259 SUPERFAMILY SSF51658 4 254 6.36E-21 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB7586 2faf6f143c26f29acaf9b9df41696e39 132 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 129 24.373 T 11-11-2016 IPR002930 Glycine cleavage system H-protein RB7586 2faf6f143c26f29acaf9b9df41696e39 132 Gene3D G3DSA:2.40.50.100 8 130 4.9E-39 T 11-11-2016 RB7586 2faf6f143c26f29acaf9b9df41696e39 132 Pfam PF01597 Glycine cleavage H-protein 8 130 4.4E-34 T 11-11-2016 IPR002930 Glycine cleavage system H-protein RB7586 2faf6f143c26f29acaf9b9df41696e39 132 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 5 128 3.3E-38 T 11-11-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 RB7586 2faf6f143c26f29acaf9b9df41696e39 132 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 52 81 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RB7586 2faf6f143c26f29acaf9b9df41696e39 132 SUPERFAMILY SSF51230 5 129 2.88E-31 T 11-11-2016 IPR011053 Single hybrid motif RB2978 5b7c307427275ce96f983c47add8818d 152 Gene3D G3DSA:3.90.79.10 6 149 2.4E-23 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB2978 5b7c307427275ce96f983c47add8818d 152 Pfam PF00293 NUDIX domain 15 134 1.2E-17 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RB2978 5b7c307427275ce96f983c47add8818d 152 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RB2978 5b7c307427275ce96f983c47add8818d 152 SUPERFAMILY SSF55811 7 140 1.9E-23 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 SUPERFAMILY SSF56112 77 356 1.62E-56 T 11-11-2016 IPR011009 Protein kinase-like domain RB12572 563e92ec590b41723b6d5ea7819c1acf 812 Pfam PF00069 Protein kinase domain 79 343 7.1E-39 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 SUPERFAMILY SSF48452 448 548 2.39E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 SUPERFAMILY SSF48452 684 791 2.39E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 Gene3D G3DSA:1.25.40.10 734 757 2.9E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 Gene3D G3DSA:1.25.40.10 422 537 2.9E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 SMART SM00220 79 358 1.1E-34 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 108 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 Gene3D G3DSA:3.30.200.20 75 135 7.0E-13 T 11-11-2016 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 Gene3D G3DSA:1.10.510.10 136 352 1.2E-38 T 11-11-2016 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 Gene3D G3DSA:1.10.510.10 711 733 1.2E-38 T 11-11-2016 RB12572 563e92ec590b41723b6d5ea7819c1acf 812 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 211 223 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB213 f3d59de5c0b3f7755f722558c0969c89 1114 Pfam PF07583 Protein of unknown function (DUF1549) 199 414 2.1E-74 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB213 f3d59de5c0b3f7755f722558c0969c89 1114 Pfam PF07635 Planctomycete cytochrome C 89 145 1.3E-16 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB213 f3d59de5c0b3f7755f722558c0969c89 1114 Pfam PF07587 Protein of unknown function (DUF1553) 798 1054 1.9E-93 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB213 f3d59de5c0b3f7755f722558c0969c89 1114 SUPERFAMILY SSF46626 62 168 2.01E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7429 73d1ae5b371f92158a078f040c58e76e 343 Gene3D G3DSA:3.40.50.1370 16 156 1.1E-46 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB7429 73d1ae5b371f92158a078f040c58e76e 343 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 182 327 1.6E-20 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RB7429 73d1ae5b371f92158a078f040c58e76e 343 Gene3D G3DSA:3.40.50.1370 157 316 4.7E-42 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB7429 73d1ae5b371f92158a078f040c58e76e 343 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 20 328 1.2E-85 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB7429 73d1ae5b371f92158a078f040c58e76e 343 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 18 331 38.908 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB7429 73d1ae5b371f92158a078f040c58e76e 343 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 8.5E-26 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 8.5E-26 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 245 254 8.5E-26 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 310 324 8.5E-26 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 8.5E-26 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 291 8.5E-26 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB7429 73d1ae5b371f92158a078f040c58e76e 343 SUPERFAMILY SSF53671 16 330 1.96E-87 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 1.1E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 1.1E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB7429 73d1ae5b371f92158a078f040c58e76e 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 294 317 1.1E-19 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RB7429 73d1ae5b371f92158a078f040c58e76e 343 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 20 161 4.2E-36 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RB7629 56b918a053b858d3cccb3007dc7aa467 397 Pfam PF01171 PP-loop family 39 238 4.4E-46 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 RB7629 56b918a053b858d3cccb3007dc7aa467 397 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 19 341 21.913 T 11-11-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RB7629 56b918a053b858d3cccb3007dc7aa467 397 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 39 242 1.8E-47 T 11-11-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RB7629 56b918a053b858d3cccb3007dc7aa467 397 Gene3D G3DSA:3.40.50.620 32 220 3.5E-16 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB7629 56b918a053b858d3cccb3007dc7aa467 397 SUPERFAMILY SSF52402 40 270 6.9E-48 T 11-11-2016 RB13165 256787648f19b51342d34413b9f7b5bc 403 Gene3D G3DSA:1.10.10.60 343 392 1.4E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB13165 256787648f19b51342d34413b9f7b5bc 403 SUPERFAMILY SSF46689 341 392 6.45E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB13165 256787648f19b51342d34413b9f7b5bc 403 Gene3D G3DSA:1.10.10.60 288 342 1.3E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB13165 256787648f19b51342d34413b9f7b5bc 403 Gene3D G3DSA:3.40.50.2300 55 113 4.1E-5 T 11-11-2016 RB13165 256787648f19b51342d34413b9f7b5bc 403 Gene3D G3DSA:3.40.50.2300 114 282 1.3E-27 T 11-11-2016 RB13165 256787648f19b51342d34413b9f7b5bc 403 SMART SM00342 305 388 2.1E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB13165 256787648f19b51342d34413b9f7b5bc 403 Pfam PF12833 Helix-turn-helix domain 312 389 7.7E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB13165 256787648f19b51342d34413b9f7b5bc 403 Pfam PF13377 Periplasmic binding protein-like domain 111 281 1.3E-37 T 11-11-2016 RB13165 256787648f19b51342d34413b9f7b5bc 403 SUPERFAMILY SSF53822 22 302 7.46E-32 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB5993 c7dadef4a6039730f0deb306f4aaa8f2 342 Gene3D G3DSA:3.40.50.1820 69 268 1.6E-41 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5993 c7dadef4a6039730f0deb306f4aaa8f2 342 Pfam PF01764 Lipase (class 3) 125 250 1.5E-19 T 11-11-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 RB5993 c7dadef4a6039730f0deb306f4aaa8f2 342 SUPERFAMILY SSF53474 103 268 1.41E-34 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1502 bba0ea9df8e76de797b47952a74410a5 133 Pfam PF00072 Response regulator receiver domain 10 119 3.6E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB1502 bba0ea9df8e76de797b47952a74410a5 133 SMART SM00448 8 119 2.2E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB1502 bba0ea9df8e76de797b47952a74410a5 133 Gene3D G3DSA:3.40.50.2300 8 124 1.1E-26 T 11-11-2016 RB1502 bba0ea9df8e76de797b47952a74410a5 133 SUPERFAMILY SSF52172 9 123 2.85E-27 T 11-11-2016 IPR011006 CheY-like superfamily RB120 f521706432367a0e9e30dc4053855734 127 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB12908 a0fa5676ae4cdd6eac6b94195faf3550 1087 SUPERFAMILY SSF50939 196 394 3.73E-17 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB12908 a0fa5676ae4cdd6eac6b94195faf3550 1087 Gene3D G3DSA:2.120.10.10 194 392 8.1E-16 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB1742 511b952ba90bed6380c17556cb76984b 285 Gene3D G3DSA:2.40.30.10 15 113 2.9E-19 T 11-11-2016 RB1742 511b952ba90bed6380c17556cb76984b 285 PRINTS PR00410 Phenol hydroxylase reductase family signature 44 56 7.7E-5 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RB1742 511b952ba90bed6380c17556cb76984b 285 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 158 7.7E-5 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RB1742 511b952ba90bed6380c17556cb76984b 285 PRINTS PR00410 Phenol hydroxylase reductase family signature 124 143 7.7E-5 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RB1742 511b952ba90bed6380c17556cb76984b 285 Gene3D G3DSA:3.40.50.80 117 239 1.7E-24 T 11-11-2016 RB1742 511b952ba90bed6380c17556cb76984b 285 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 241 282 1.3E-14 T 11-11-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain RB1742 511b952ba90bed6380c17556cb76984b 285 PIRSF PIRSF006816 12 285 2.0E-48 T 11-11-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 RB1742 511b952ba90bed6380c17556cb76984b 285 Gene3D G3DSA:2.10.240.10 241 284 1.6E-15 T 11-11-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain RB1742 511b952ba90bed6380c17556cb76984b 285 SUPERFAMILY SSF63380 14 115 3.05E-16 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB1742 511b952ba90bed6380c17556cb76984b 285 SUPERFAMILY SSF52343 110 282 3.01E-34 T 11-11-2016 RB1742 511b952ba90bed6380c17556cb76984b 285 Pfam PF00970 Oxidoreductase FAD-binding domain 18 113 3.8E-6 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 Gene3D G3DSA:3.30.420.40 97 217 1.7E-7 T 11-11-2016 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 11-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 PRINTS PR00471 Acetate kinase family signature 313 326 3.4E-35 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 PRINTS PR00471 Acetate kinase family signature 188 201 3.4E-35 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 PRINTS PR00471 Acetate kinase family signature 3 14 3.4E-35 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 PRINTS PR00471 Acetate kinase family signature 389 401 3.4E-35 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 PRINTS PR00471 Acetate kinase family signature 216 237 3.4E-35 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 PRINTS PR00471 Acetate kinase family signature 335 351 3.4E-35 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 Gene3D G3DSA:3.30.420.40 218 406 2.7E-59 T 11-11-2016 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 PIRSF PIRSF000722 1 411 1.3E-134 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 TIGRFAM TIGR00016 ackA: acetate kinase 1 406 2.2E-101 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 SUPERFAMILY SSF53067 173 407 3.99E-69 T 11-11-2016 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 SUPERFAMILY SSF53067 1 210 3.8E-46 T 11-11-2016 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 Pfam PF00871 Acetokinase family 3 402 1.0E-102 T 11-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB2582 9faf0a142e5e23e0ba98118c625d8a15 411 Hamap MF_00020 Acetate kinase [ackA]. 1 411 132.309 T 11-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RB5482 85e4d536dd52e5b1ed70a1b6cd68a172 218 SMART SM00448 93 206 1.7E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5482 85e4d536dd52e5b1ed70a1b6cd68a172 218 SUPERFAMILY SSF52172 92 217 7.97E-29 T 11-11-2016 IPR011006 CheY-like superfamily RB5482 85e4d536dd52e5b1ed70a1b6cd68a172 218 Gene3D G3DSA:3.40.50.2300 92 217 1.1E-26 T 11-11-2016 RB5482 85e4d536dd52e5b1ed70a1b6cd68a172 218 Pfam PF00072 Response regulator receiver domain 95 203 1.8E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB12690 e501ab4397abca90467bf9f27a50f273 250 Pfam PF02348 Cytidylyltransferase 4 222 1.1E-38 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 RB12690 e501ab4397abca90467bf9f27a50f273 250 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 2.7E-59 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 RB12690 e501ab4397abca90467bf9f27a50f273 250 SUPERFAMILY SSF53448 1 246 1.97E-51 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB12690 e501ab4397abca90467bf9f27a50f273 250 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 34.581 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 RB12690 e501ab4397abca90467bf9f27a50f273 250 Gene3D G3DSA:3.90.550.10 1 247 8.4E-65 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB12740 09bbb9ce52b13847082251f1ca662173 395 SUPERFAMILY SSF63829 86 392 1.48E-56 T 11-11-2016 RB12740 09bbb9ce52b13847082251f1ca662173 395 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 117 384 2.4E-43 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RB12740 09bbb9ce52b13847082251f1ca662173 395 Gene3D G3DSA:2.120.10.30 100 392 6.8E-64 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3421 bdb07e35b6bb4002293b9f5bc5662c56 811 Gene3D G3DSA:3.20.20.80 330 541 8.1E-16 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB3421 bdb07e35b6bb4002293b9f5bc5662c56 811 SUPERFAMILY SSF51445 314 581 3.02E-23 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB3075 7eec40fa69254e2e1b08c5fe36c332ef 888 Pfam PF07595 Planctomycete extracellular 66 88 1.6E-5 T 11-11-2016 IPR011506 Planctomycete extracellular RB3075 7eec40fa69254e2e1b08c5fe36c332ef 888 SUPERFAMILY SSF63446 743 803 1.26E-6 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB3075 7eec40fa69254e2e1b08c5fe36c332ef 888 SUPERFAMILY SSF49452 658 716 3.73E-5 T 11-11-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 RB3075 7eec40fa69254e2e1b08c5fe36c332ef 888 Pfam PF00404 Dockerin type I repeat 783 803 1.8E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB3075 7eec40fa69254e2e1b08c5fe36c332ef 888 Pfam PF00404 Dockerin type I repeat 745 762 1.9E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB3893 429f47f88997fb0814d9bb61f8df12cb 502 SMART SM00220 72 334 8.5E-40 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB3893 429f47f88997fb0814d9bb61f8df12cb 502 Pfam PF00069 Protein kinase domain 72 327 8.0E-40 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB3893 429f47f88997fb0814d9bb61f8df12cb 502 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 78 99 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB3893 429f47f88997fb0814d9bb61f8df12cb 502 SUPERFAMILY SSF56112 68 327 1.89E-56 T 11-11-2016 IPR011009 Protein kinase-like domain RB3893 429f47f88997fb0814d9bb61f8df12cb 502 SUPERFAMILY SSF52172 365 494 6.93E-8 T 11-11-2016 IPR011006 CheY-like superfamily RB3893 429f47f88997fb0814d9bb61f8df12cb 502 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 189 201 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB3893 429f47f88997fb0814d9bb61f8df12cb 502 Gene3D G3DSA:1.10.510.10 137 326 1.6E-35 T 11-11-2016 RB3893 429f47f88997fb0814d9bb61f8df12cb 502 Gene3D G3DSA:3.40.50.2300 372 493 2.0E-6 T 11-11-2016 RB3893 429f47f88997fb0814d9bb61f8df12cb 502 Gene3D G3DSA:3.30.200.20 64 136 4.7E-19 T 11-11-2016 RB4866 7e235340083fa48239dd897a233598cd 238 Gene3D G3DSA:3.40.50.300 11 219 2.9E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4866 7e235340083fa48239dd897a233598cd 238 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB4866 7e235340083fa48239dd897a233598cd 238 SUPERFAMILY SSF52540 12 218 2.35E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4866 7e235340083fa48239dd897a233598cd 238 Pfam PF00005 ABC transporter 37 180 1.2E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB4866 7e235340083fa48239dd897a233598cd 238 SMART SM00382 42 231 1.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10721 eee6689293e7a6976b72bdab2800a6d6 1121 SUPERFAMILY SSF50182 921 986 9.15E-14 T 11-11-2016 IPR010920 LSM domain RB10721 eee6689293e7a6976b72bdab2800a6d6 1121 SUPERFAMILY SSF82689 995 1071 1.44E-5 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RB10721 eee6689293e7a6976b72bdab2800a6d6 1121 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 805 4.7E-60 T 11-11-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 RB10721 eee6689293e7a6976b72bdab2800a6d6 1121 Gene3D G3DSA:3.30.70.100 995 1071 6.4E-4 T 11-11-2016 RB10721 eee6689293e7a6976b72bdab2800a6d6 1121 Pfam PF00924 Mechanosensitive ion channel 882 1074 1.3E-39 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RB10721 eee6689293e7a6976b72bdab2800a6d6 1121 Gene3D G3DSA:2.30.30.60 937 986 1.3E-13 T 11-11-2016 RB11746 cb6376e4fc9b1faf668a4e4a1e4ad0ee 503 SUPERFAMILY SSF53649 324 478 6.76E-20 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB11746 cb6376e4fc9b1faf668a4e4a1e4ad0ee 503 Gene3D G3DSA:3.40.720.10 369 484 3.6E-7 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB11746 cb6376e4fc9b1faf668a4e4a1e4ad0ee 503 Pfam PF07394 Protein of unknown function (DUF1501) 78 502 2.6E-159 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Pfam PF03144 Elongation factor Tu domain 2 358 423 3.8E-8 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 193 9.4E-33 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Gene3D G3DSA:3.30.70.240 634 718 3.4E-26 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Pfam PF00009 Elongation factor Tu GTP binding domain 34 310 8.1E-60 T 11-11-2016 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Gene3D G3DSA:3.30.230.10 516 633 3.1E-17 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB7821 430fe54e597aa2cea1b85e3090758b8e 724 SUPERFAMILY SSF52540 31 311 1.25E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Pfam PF03764 Elongation factor G, domain IV 511 632 4.7E-12 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Gene3D G3DSA:2.40.30.10 335 437 4.6E-25 T 11-11-2016 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 SUPERFAMILY SSF50447 295 436 1.2E-21 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB7821 430fe54e597aa2cea1b85e3090758b8e 724 SMART SM00889 512 633 1.5E-16 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Gene3D G3DSA:3.40.50.300 30 316 1.8E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Pfam PF00679 Elongation factor G C-terminus 635 720 6.0E-26 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB7821 430fe54e597aa2cea1b85e3090758b8e 724 SMART SM00838 635 722 3.0E-39 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain RB7821 430fe54e597aa2cea1b85e3090758b8e 724 PRINTS PR00315 GTP-binding elongation factor signature 83 91 4.0E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 PRINTS PR00315 GTP-binding elongation factor signature 155 164 4.0E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 PRINTS PR00315 GTP-binding elongation factor signature 37 50 4.0E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 PRINTS PR00315 GTP-binding elongation factor signature 103 113 4.0E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 PRINTS PR00315 GTP-binding elongation factor signature 119 130 4.0E-16 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Gene3D G3DSA:3.30.70.870 438 512 3.1E-25 T 11-11-2016 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 Pfam PF14492 Elongation Factor G, domain II 436 508 9.9E-24 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB7821 430fe54e597aa2cea1b85e3090758b8e 724 TIGRFAM TIGR00484 EF-G: translation elongation factor G 29 718 7.2E-207 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB7821 430fe54e597aa2cea1b85e3090758b8e 724 SUPERFAMILY SSF54211 511 634 4.05E-17 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB7821 430fe54e597aa2cea1b85e3090758b8e 724 SUPERFAMILY SSF54980 635 720 1.92E-23 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB7821 430fe54e597aa2cea1b85e3090758b8e 724 SUPERFAMILY SSF54980 438 513 3.96E-19 T 11-11-2016 IPR009022 Elongation factor G, III-V domain RB1021 9e82d0f0b39cb814ce90ab37fb286a68 443 Gene3D G3DSA:3.60.21.10 19 253 1.5E-22 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB1021 9e82d0f0b39cb814ce90ab37fb286a68 443 SUPERFAMILY SSF56300 20 268 5.22E-27 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB6751 037ebb9c04dd7c197da3a46054b84eae 859 SMART SM01086 733 823 3.3E-27 T 11-11-2016 IPR019489 Clp ATPase, C-terminal RB6751 037ebb9c04dd7c197da3a46054b84eae 859 SUPERFAMILY SSF52540 180 491 7.72E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Gene3D G3DSA:1.10.1780.10 1 144 5.1E-45 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Gene3D G3DSA:1.10.8.60 364 440 5.0E-34 T 11-11-2016 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 SMART SM00382 556 734 5.6E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6751 037ebb9c04dd7c197da3a46054b84eae 859 SMART SM00382 219 363 3.5E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6751 037ebb9c04dd7c197da3a46054b84eae 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 560 578 3.0E-40 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 634 652 3.0E-40 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 3.0E-40 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 667 681 3.0E-40 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 67 1.2E-16 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 2.9E-17 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 555 726 3.8E-54 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Gene3D G3DSA:3.40.50.300 716 743 3.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Gene3D G3DSA:3.40.50.300 510 682 3.2E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 733 812 1.2E-20 T 11-11-2016 IPR019489 Clp ATPase, C-terminal RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Pfam PF02151 UvrB/uvrC motif 436 471 2.4E-8 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 SUPERFAMILY SSF81923 3 144 1.18E-31 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 224 356 1.6E-11 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 SUPERFAMILY SSF52540 505 818 5.1E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Gene3D G3DSA:1.10.8.60 744 819 4.8E-26 T 11-11-2016 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Gene3D G3DSA:3.40.50.300 181 360 8.4E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6751 037ebb9c04dd7c197da3a46054b84eae 859 Gene3D G3DSA:4.10.860.10 441 474 3.3E-5 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB6751 037ebb9c04dd7c197da3a46054b84eae 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 314 326 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 Gene3D G3DSA:1.20.1080.10 3 223 1.3E-59 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 SUPERFAMILY SSF81338 2 220 2.62E-57 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 Gene3D G3DSA:3.40.50.1110 263 448 2.4E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 PRINTS PR00783 Major intrinsic protein family signature 7 26 2.2E-40 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 PRINTS PR00783 Major intrinsic protein family signature 82 101 2.2E-40 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 PRINTS PR00783 Major intrinsic protein family signature 45 69 2.2E-40 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 PRINTS PR00783 Major intrinsic protein family signature 158 180 2.2E-40 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 PRINTS PR00783 Major intrinsic protein family signature 195 215 2.2E-40 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 PRINTS PR00783 Major intrinsic protein family signature 127 145 2.2E-40 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 288 436 2.6E-8 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 Pfam PF00230 Major intrinsic protein 3 212 2.3E-46 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 ProSitePatterns PS00221 MIP family signature. 63 71 - T 11-11-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB4879 c73b006e6dbbd7ae3722f2b70a4222a8 534 SUPERFAMILY SSF52266 263 448 4.5E-20 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB5983 411419132d4a3fdc7521cf4f1306922f 287 PRINTS PR00474 Glutamate 5-kinase family signature 184 211 1.3E-6 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RB5983 411419132d4a3fdc7521cf4f1306922f 287 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 1.3E-6 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RB5983 411419132d4a3fdc7521cf4f1306922f 287 PRINTS PR00474 Glutamate 5-kinase family signature 237 257 1.3E-6 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 RB5983 411419132d4a3fdc7521cf4f1306922f 287 SUPERFAMILY SSF53633 3 286 1.7E-77 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB5983 411419132d4a3fdc7521cf4f1306922f 287 Hamap MF_00082_B Acetylglutamate kinase [argB]. 22 287 32.096 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RB5983 411419132d4a3fdc7521cf4f1306922f 287 Pfam PF00696 Amino acid kinase family 24 264 4.3E-49 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB5983 411419132d4a3fdc7521cf4f1306922f 287 TIGRFAM TIGR00761 argB: acetylglutamate kinase 25 262 7.5E-68 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RB5983 411419132d4a3fdc7521cf4f1306922f 287 Gene3D G3DSA:3.40.1160.10 22 286 1.3E-89 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB5983 411419132d4a3fdc7521cf4f1306922f 287 PIRSF PIRSF000728 9 287 4.6E-99 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RB9292 dc5b906406a8654f169b6f8a864e33d2 733 SUPERFAMILY SSF51445 531 606 2.19E-132 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB9292 dc5b906406a8654f169b6f8a864e33d2 733 SUPERFAMILY SSF51445 167 502 2.19E-132 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB9292 dc5b906406a8654f169b6f8a864e33d2 733 SUPERFAMILY SSF51011 620 728 1.8E-14 T 11-11-2016 RB9292 dc5b906406a8654f169b6f8a864e33d2 733 Pfam PF00128 Alpha amylase, catalytic domain 212 331 3.1E-14 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB9292 dc5b906406a8654f169b6f8a864e33d2 733 Gene3D G3DSA:3.20.20.80 186 607 1.6E-123 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB9292 dc5b906406a8654f169b6f8a864e33d2 733 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 53 696 4.9E-220 T 11-11-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 RB9292 dc5b906406a8654f169b6f8a864e33d2 733 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 54 146 1.5E-10 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RB9292 dc5b906406a8654f169b6f8a864e33d2 733 Gene3D G3DSA:2.60.40.10 53 185 1.7E-39 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9292 dc5b906406a8654f169b6f8a864e33d2 733 SUPERFAMILY SSF81296 51 180 1.12E-32 T 11-11-2016 IPR014756 Immunoglobulin E-set RB9292 dc5b906406a8654f169b6f8a864e33d2 733 Gene3D G3DSA:2.60.40.1180 619 727 5.4E-15 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta RB9292 dc5b906406a8654f169b6f8a864e33d2 733 SMART SM00642 192 599 4.2E-12 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB11230 06793e24aaa112bacb23cbb118206655 159 SUPERFAMILY SSF47240 1 154 4.73E-43 T 11-11-2016 IPR009078 Ferritin-like superfamily RB11230 06793e24aaa112bacb23cbb118206655 159 Pfam PF00210 Ferritin-like domain 7 143 3.0E-28 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RB11230 06793e24aaa112bacb23cbb118206655 159 Gene3D G3DSA:1.20.1260.10 2 153 3.7E-47 T 11-11-2016 IPR012347 Ferritin-related RB11230 06793e24aaa112bacb23cbb118206655 159 PRINTS PR00601 Bacterioferritin signature 106 126 7.3E-29 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RB11230 06793e24aaa112bacb23cbb118206655 159 PRINTS PR00601 Bacterioferritin signature 64 84 7.3E-29 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RB11230 06793e24aaa112bacb23cbb118206655 159 PRINTS PR00601 Bacterioferritin signature 22 42 7.3E-29 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RB11230 06793e24aaa112bacb23cbb118206655 159 PRINTS PR00601 Bacterioferritin signature 43 63 7.3E-29 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RB11230 06793e24aaa112bacb23cbb118206655 159 PRINTS PR00601 Bacterioferritin signature 127 148 7.3E-29 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RB11230 06793e24aaa112bacb23cbb118206655 159 PRINTS PR00601 Bacterioferritin signature 2 21 7.3E-29 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RB11230 06793e24aaa112bacb23cbb118206655 159 PRINTS PR00601 Bacterioferritin signature 85 105 7.3E-29 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RB11230 06793e24aaa112bacb23cbb118206655 159 PIRSF PIRSF002560 1 156 2.3E-52 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RB8759 354b3a3779de7791ada721cfea14d029 747 SUPERFAMILY SSF53300 123 265 2.78E-29 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8759 354b3a3779de7791ada721cfea14d029 747 SUPERFAMILY SSF53300 299 318 2.78E-29 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8759 354b3a3779de7791ada721cfea14d029 747 SMART SM00327 126 296 1.8E-17 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8759 354b3a3779de7791ada721cfea14d029 747 Gene3D G3DSA:3.40.50.410 299 313 2.0E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8759 354b3a3779de7791ada721cfea14d029 747 Gene3D G3DSA:3.40.50.410 123 265 2.0E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8759 354b3a3779de7791ada721cfea14d029 747 Pfam PF13519 von Willebrand factor type A domain 130 237 2.1E-22 T 11-11-2016 IPR002035 von Willebrand factor, type A RB2593 f38213de8ecaa87d3ae99072ac73143f 362 SUPERFAMILY SSF103481 250 346 5.75E-10 T 11-11-2016 RB2593 f38213de8ecaa87d3ae99072ac73143f 362 SUPERFAMILY SSF103481 81 178 1.22E-6 T 11-11-2016 RB2593 f38213de8ecaa87d3ae99072ac73143f 362 Pfam PF00892 EamA-like transporter family 206 342 1.8E-8 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RB1022 c8744b567908cc504a3f2c111b446546 313 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 44 293 5.5E-46 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RB1022 c8744b567908cc504a3f2c111b446546 313 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 123 144 7.6E-6 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) RB1022 c8744b567908cc504a3f2c111b446546 313 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 171 193 7.6E-6 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) RB1022 c8744b567908cc504a3f2c111b446546 313 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 214 7.6E-6 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) RB1022 c8744b567908cc504a3f2c111b446546 313 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 237 254 7.6E-6 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) RB1022 c8744b567908cc504a3f2c111b446546 313 SUPERFAMILY SSF63829 20 309 8.5E-52 T 11-11-2016 RB1022 c8744b567908cc504a3f2c111b446546 313 Gene3D G3DSA:2.120.10.30 32 309 6.8E-56 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 Pfam PF12531 DNA-K related protein 738 986 2.2E-75 T 11-11-2016 IPR021030 Protein of unknown function DUF3731 RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 SUPERFAMILY SSF53067 466 520 1.3E-24 T 11-11-2016 RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 SUPERFAMILY SSF53067 275 420 1.3E-24 T 11-11-2016 RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 Gene3D G3DSA:3.30.420.40 281 358 2.3E-8 T 11-11-2016 RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 Gene3D G3DSA:3.30.420.40 106 280 5.8E-32 T 11-11-2016 RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 Gene3D G3DSA:3.30.420.40 50 71 5.8E-32 T 11-11-2016 RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 SUPERFAMILY SSF53067 49 260 2.27E-28 T 11-11-2016 RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 Pfam PF00012 Hsp70 protein 215 397 5.8E-12 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB5755 02884ae9525e7bbc3669e86db4e2a6c3 988 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 54 61 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 SUPERFAMILY SSF82693 41 133 5.23E-13 T 11-11-2016 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 SUPERFAMILY SSF82693 135 181 5.75E-7 T 11-11-2016 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 SUPERFAMILY SSF82693 267 329 5.75E-7 T 11-11-2016 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 SUPERFAMILY SSF82866 824 1044 8.11E-48 T 11-11-2016 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 Gene3D G3DSA:3.30.2090.10 182 263 9.7E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 1.3E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 1.3E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 1.3E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.3E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.3E-28 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 SUPERFAMILY SSF82714 182 263 9.81E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 SUPERFAMILY SSF82714 728 820 7.59E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 Pfam PF00873 AcrB/AcrD/AcrF family 4 1041 3.3E-198 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 Gene3D G3DSA:1.10.3850.10 271 497 2.1E-50 T 11-11-2016 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 Gene3D G3DSA:1.10.3850.10 827 1043 2.3E-58 T 11-11-2016 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 SUPERFAMILY SSF82866 290 495 2.49E-38 T 11-11-2016 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 Gene3D G3DSA:3.30.70.1430 43 139 8.8E-12 T 11-11-2016 RB191 7c67bfb39f4dae843d3d4ef4ef9288ab 1048 Gene3D G3DSA:3.30.2090.10 727 820 8.1E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB2296 d91a2e16eae519531488d12f0997ce09 329 Gene3D G3DSA:3.90.1530.10 47 149 5.7E-31 T 11-11-2016 RB2296 d91a2e16eae519531488d12f0997ce09 329 SUPERFAMILY SSF110849 55 145 1.74E-26 T 11-11-2016 IPR003115 ParB/Sulfiredoxin RB2296 d91a2e16eae519531488d12f0997ce09 329 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 54 228 8.2E-52 T 11-11-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RB2296 d91a2e16eae519531488d12f0997ce09 329 SMART SM00470 54 143 3.4E-29 T 11-11-2016 IPR003115 ParB/Sulfiredoxin RB2296 d91a2e16eae519531488d12f0997ce09 329 SUPERFAMILY SSF109709 136 242 9.02E-32 T 11-11-2016 RB2296 d91a2e16eae519531488d12f0997ce09 329 Pfam PF02195 ParB-like nuclease domain 55 142 1.1E-23 T 11-11-2016 IPR003115 ParB/Sulfiredoxin RB2842 c8acb2c716011a5b32fd278113cbb54f 574 SUPERFAMILY SSF49899 377 569 3.29E-27 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2842 c8acb2c716011a5b32fd278113cbb54f 574 Pfam PF04773 FecR protein 191 274 1.3E-5 T 11-11-2016 IPR006860 FecR protein RB2842 c8acb2c716011a5b32fd278113cbb54f 574 Gene3D G3DSA:2.60.120.200 376 571 1.5E-18 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2842 c8acb2c716011a5b32fd278113cbb54f 574 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 417 563 4.0E-14 T 11-11-2016 RB6765 f68eb6faf61dba1944c5627fa26ac57e 496 Gene3D G3DSA:3.30.1120.10 402 484 3.6E-22 T 11-11-2016 RB6765 f68eb6faf61dba1944c5627fa26ac57e 496 Gene3D G3DSA:3.40.720.10 29 399 2.4E-115 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB6765 f68eb6faf61dba1944c5627fa26ac57e 496 ProSitePatterns PS00149 Sulfatases signature 2. 134 144 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB6765 f68eb6faf61dba1944c5627fa26ac57e 496 SUPERFAMILY SSF53649 30 478 3.27E-134 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6765 f68eb6faf61dba1944c5627fa26ac57e 496 Pfam PF00884 Sulfatase 31 377 4.5E-73 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB6765 f68eb6faf61dba1944c5627fa26ac57e 496 Pfam PF16347 Domain of unknown function (DUF4976) 385 474 6.6E-9 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB6765 f68eb6faf61dba1944c5627fa26ac57e 496 ProSitePatterns PS00523 Sulfatases signature 1. 78 90 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 Gene3D G3DSA:1.20.1640.10 326 525 1.5E-45 T 11-11-2016 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 SUPERFAMILY SSF82693 77 167 9.42E-18 T 11-11-2016 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 SUPERFAMILY SSF82866 332 524 6.41E-38 T 11-11-2016 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 Gene3D G3DSA:3.30.70.1430 78 166 2.8E-19 T 11-11-2016 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 Pfam PF00873 AcrB/AcrD/AcrF family 41 1064 6.6E-140 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 Gene3D G3DSA:1.10.3850.10 855 1069 6.8E-41 T 11-11-2016 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 SUPERFAMILY SSF82693 305 357 2.62E-8 T 11-11-2016 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 SUPERFAMILY SSF82693 175 218 2.62E-8 T 11-11-2016 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 Gene3D G3DSA:3.30.2090.10 220 301 2.5E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 SUPERFAMILY SSF82714 221 300 2.88E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 SUPERFAMILY SSF82714 753 847 1.11E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 SUPERFAMILY SSF82866 847 1069 2.62E-36 T 11-11-2016 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 Gene3D G3DSA:3.30.2090.10 753 848 2.5E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 PRINTS PR00702 Acriflavin resistance protein family signature 474 497 4.5E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 PRINTS PR00702 Acriflavin resistance protein family signature 421 445 4.5E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 PRINTS PR00702 Acriflavin resistance protein family signature 499 522 4.5E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 PRINTS PR00702 Acriflavin resistance protein family signature 73 91 4.5E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB4870 9df51786d6d98aaf4bc59155a97f994b 1081 PRINTS PR00702 Acriflavin resistance protein family signature 393 414 4.5E-21 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB7277 e83bc05ec06881683cb75f48fcfc8d05 327 Gene3D G3DSA:3.40.50.1820 251 326 1.4E-16 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7277 e83bc05ec06881683cb75f48fcfc8d05 327 Gene3D G3DSA:3.40.50.1820 57 199 1.4E-16 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7277 e83bc05ec06881683cb75f48fcfc8d05 327 Pfam PF12146 Serine aminopeptidase, S33 64 202 1.9E-8 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 RB7277 e83bc05ec06881683cb75f48fcfc8d05 327 SUPERFAMILY SSF53474 251 325 1.01E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7277 e83bc05ec06881683cb75f48fcfc8d05 327 SUPERFAMILY SSF53474 47 178 1.01E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8767 6a7acba46f695e7f070b28b646870a82 291 SMART SM00327 76 240 3.3E-8 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8767 6a7acba46f695e7f070b28b646870a82 291 Pfam PF01882 Protein of unknown function DUF58 37 122 6.8E-23 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB8767 6a7acba46f695e7f070b28b646870a82 291 Gene3D G3DSA:3.40.50.410 76 193 9.1E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8767 6a7acba46f695e7f070b28b646870a82 291 SUPERFAMILY SSF53300 73 193 4.45E-16 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Pfam PF02574 Homocysteine S-methyltransferase 32 340 1.8E-77 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Pfam PF02607 B12 binding domain 675 748 1.9E-23 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Gene3D G3DSA:3.20.20.20 381 653 8.0E-111 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 SUPERFAMILY SSF51717 373 647 7.72E-85 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 957 1227 7.9E-116 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 SUPERFAMILY SSF47644 667 754 6.41E-29 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 SUPERFAMILY SSF82282 23 416 5.23E-108 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 TIGRFAM TIGR02082 metH: methionine synthase 28 1211 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Pfam PF02310 B12 binding domain 768 863 4.1E-20 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 SUPERFAMILY SSF52242 762 911 9.42E-44 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Gene3D G3DSA:3.20.20.330 18 380 8.0E-108 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Gene3D G3DSA:3.10.196.10 976 1245 3.2E-110 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 PIRSF PIRSF000381 16 1214 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 SUPERFAMILY SSF56507 920 1245 2.88E-128 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Pfam PF00809 Pterin binding enzyme 377 615 1.5E-56 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Gene3D G3DSA:3.40.50.280 765 911 5.3E-58 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 SMART SM01018 672 755 2.6E-45 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB9857 cee6bbfeb9df918372eacf9eadf07d87 1246 Gene3D G3DSA:1.10.1240.10 666 752 3.9E-37 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB4582 8b195417ac97690388266fd8897c333c 382 Gene3D G3DSA:3.40.50.300 115 319 7.2E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4582 8b195417ac97690388266fd8897c333c 382 Pfam PF02562 PhoH-like protein 115 319 5.2E-88 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 RB4582 8b195417ac97690388266fd8897c333c 382 SUPERFAMILY SSF52540 110 294 1.6E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10892 8d2038959db4257cfefb1f36b61a6796 900 SUPERFAMILY SSF111352 37 410 8.89E-102 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RB10892 8d2038959db4257cfefb1f36b61a6796 900 Gene3D G3DSA:3.30.565.10 718 875 1.8E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10892 8d2038959db4257cfefb1f36b61a6796 900 Gene3D G3DSA:3.30.450.20 478 583 4.1E-5 T 11-11-2016 RB10892 8d2038959db4257cfefb1f36b61a6796 900 SUPERFAMILY SSF55785 505 609 2.86E-5 T 11-11-2016 IPR000014 PAS domain RB10892 8d2038959db4257cfefb1f36b61a6796 900 SMART SM00387 757 875 1.1E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10892 8d2038959db4257cfefb1f36b61a6796 900 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 761 873 1.7E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10892 8d2038959db4257cfefb1f36b61a6796 900 Gene3D G3DSA:1.10.3430.10 36 410 1.1E-107 T 11-11-2016 IPR029020 Ammonium/urea transporter RB10892 8d2038959db4257cfefb1f36b61a6796 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 859 872 9.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10892 8d2038959db4257cfefb1f36b61a6796 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 834 852 9.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10892 8d2038959db4257cfefb1f36b61a6796 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 803 817 9.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10892 8d2038959db4257cfefb1f36b61a6796 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 831 9.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10892 8d2038959db4257cfefb1f36b61a6796 900 TIGRFAM TIGR00836 amt: ammonium transporter 37 427 1.4E-112 T 11-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RB10892 8d2038959db4257cfefb1f36b61a6796 900 Gene3D G3DSA:1.10.287.130 612 658 1.6E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10892 8d2038959db4257cfefb1f36b61a6796 900 Pfam PF00909 Ammonium Transporter Family 37 427 2.8E-108 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RB10892 8d2038959db4257cfefb1f36b61a6796 900 Pfam PF00512 His Kinase A (phospho-acceptor) domain 618 672 2.4E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10892 8d2038959db4257cfefb1f36b61a6796 900 SUPERFAMILY SSF47384 610 654 1.18E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10892 8d2038959db4257cfefb1f36b61a6796 900 ProSitePatterns PS01219 Ammonium transporters signature. 185 210 - T 11-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RB10892 8d2038959db4257cfefb1f36b61a6796 900 SUPERFAMILY SSF55874 708 876 1.3E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10595 06132752a75aaf4299cf2e66a0777bf3 952 Pfam PF03200 Glycosyl hydrolase family 63 C-terminal domain 622 852 2.6E-8 T 11-11-2016 IPR031335 Glycosyl hydrolase family 63, C-terminal KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10|KEGG: 00510+3.2.1.106|Reactome: R-HSA-4793954|Reactome: R-HSA-532668 RB10595 06132752a75aaf4299cf2e66a0777bf3 952 SUPERFAMILY SSF48208 491 687 4.99E-48 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB10595 06132752a75aaf4299cf2e66a0777bf3 952 SUPERFAMILY SSF48208 762 940 4.99E-48 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 SUPERFAMILY SSF82866 299 493 8.11E-40 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 Gene3D G3DSA:3.30.70.1430 51 147 7.9E-20 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 SUPERFAMILY SSF82693 51 138 1.1E-16 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 Gene3D G3DSA:3.30.2090.10 189 274 3.5E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 Gene3D G3DSA:3.30.70.1320 276 311 2.5E-8 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 Gene3D G3DSA:3.30.70.1320 148 153 2.5E-8 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 SUPERFAMILY SSF82714 729 802 2.88E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 SUPERFAMILY SSF82714 189 273 6.15E-14 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 Gene3D G3DSA:1.20.1640.10 312 495 2.7E-47 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 Gene3D G3DSA:1.10.3850.10 808 1024 1.8E-53 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 Pfam PF00873 AcrB/AcrD/AcrF family 20 1023 7.5E-166 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 SUPERFAMILY SSF82693 274 325 2.3E-8 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 SUPERFAMILY SSF82693 146 187 2.3E-8 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 SUPERFAMILY SSF82693 576 670 6.63E-6 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 9.1E-24 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 9.1E-24 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 9.1E-24 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 9.1E-24 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 9.1E-24 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 SUPERFAMILY SSF82866 802 1026 2.62E-44 T 11-11-2016 RB11152 ec4773b0e13a3be943bd158c3f0d4ad7 1035 Gene3D G3DSA:3.30.2090.10 729 802 4.9E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB8456 136ad5bba5b1be62211aab4ab82b181b 210 Pfam PF05685 Putative restriction endonuclease 25 192 2.0E-29 T 11-11-2016 IPR008538 Domain of unknown function DUF820 RB8456 136ad5bba5b1be62211aab4ab82b181b 210 Gene3D G3DSA:3.90.1570.10 14 192 1.8E-16 T 11-11-2016 IPR012296 Nuclease, putative, TT1808 RB8456 136ad5bba5b1be62211aab4ab82b181b 210 SUPERFAMILY SSF52980 15 191 3.86E-18 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RB10650 cf25a42259805ac592be842ea90c9a9e 407 Gene3D G3DSA:3.40.50.1100 191 402 2.1E-87 T 11-11-2016 RB10650 cf25a42259805ac592be842ea90c9a9e 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 390 1.7E-47 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB10650 cf25a42259805ac592be842ea90c9a9e 407 PIRSF PIRSF001413 1 407 2.0E-158 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RB10650 cf25a42259805ac592be842ea90c9a9e 407 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 19 401 7.2E-180 T 11-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RB10650 cf25a42259805ac592be842ea90c9a9e 407 SUPERFAMILY SSF53686 15 396 1.02E-142 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB10650 cf25a42259805ac592be842ea90c9a9e 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 93 107 - T 11-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RB10650 cf25a42259805ac592be842ea90c9a9e 407 Gene3D G3DSA:3.40.50.1100 113 190 5.6E-19 T 11-11-2016 RB10650 cf25a42259805ac592be842ea90c9a9e 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 14 403 50.963 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RB9713 f539b8b8917515544f735d53b67aaa6c 1082 SUPERFAMILY SSF46626 7 113 2.73E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9713 f539b8b8917515544f735d53b67aaa6c 1082 Gene3D G3DSA:1.10.760.10 226 327 3.8E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9713 f539b8b8917515544f735d53b67aaa6c 1082 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 47 186 1.8E-22 T 11-11-2016 IPR013427 Haem-binding domain, putative RB9713 f539b8b8917515544f735d53b67aaa6c 1082 Gene3D G3DSA:1.10.760.10 163 186 1.8E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9713 f539b8b8917515544f735d53b67aaa6c 1082 Gene3D G3DSA:1.10.760.10 37 126 1.8E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9713 f539b8b8917515544f735d53b67aaa6c 1082 SUPERFAMILY SSF63829 631 976 4.51E-21 T 11-11-2016 RB9713 f539b8b8917515544f735d53b67aaa6c 1082 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 231 305 1.0E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9713 f539b8b8917515544f735d53b67aaa6c 1082 Gene3D G3DSA:2.120.10.30 668 973 2.6E-20 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9713 f539b8b8917515544f735d53b67aaa6c 1082 SUPERFAMILY SSF46626 208 308 7.42E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8928 5ff3035eac12b6cde99ee070dd16b0a4 408 Pfam PF01553 Acyltransferase 52 186 7.3E-17 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RB8928 5ff3035eac12b6cde99ee070dd16b0a4 408 Gene3D G3DSA:3.40.1130.10 46 167 2.2E-10 T 11-11-2016 RB8928 5ff3035eac12b6cde99ee070dd16b0a4 408 SMART SM00563 61 189 5.2E-15 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RB8928 5ff3035eac12b6cde99ee070dd16b0a4 408 SUPERFAMILY SSF69593 10 267 1.7E-34 T 11-11-2016 RB5205 27ec563c29adba07dc01d47d3ab14a85 626 Gene3D G3DSA:3.10.50.40 484 591 1.1E-14 T 11-11-2016 RB5205 27ec563c29adba07dc01d47d3ab14a85 626 Gene3D G3DSA:3.10.50.40 194 313 1.0E-17 T 11-11-2016 RB5205 27ec563c29adba07dc01d47d3ab14a85 626 SUPERFAMILY SSF109998 344 498 1.31E-6 T 11-11-2016 IPR027304 Trigger factor/SurA domain RB5205 27ec563c29adba07dc01d47d3ab14a85 626 SUPERFAMILY SSF54534 193 282 2.2E-15 T 11-11-2016 RB5205 27ec563c29adba07dc01d47d3ab14a85 626 Pfam PF13624 SurA N-terminal domain 96 163 1.1E-7 T 11-11-2016 RB5205 27ec563c29adba07dc01d47d3ab14a85 626 SUPERFAMILY SSF54534 471 564 1.05E-12 T 11-11-2016 RB5205 27ec563c29adba07dc01d47d3ab14a85 626 SUPERFAMILY SSF109998 72 220 3.18E-20 T 11-11-2016 IPR027304 Trigger factor/SurA domain RB5205 27ec563c29adba07dc01d47d3ab14a85 626 Pfam PF00639 PPIC-type PPIASE domain 491 564 3.3E-6 T 11-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RB5205 27ec563c29adba07dc01d47d3ab14a85 626 Pfam PF00639 PPIC-type PPIASE domain 207 272 1.1E-8 T 11-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Gene3D G3DSA:3.30.450.20 224 345 5.5E-17 T 11-11-2016 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 SMART SM00387 630 747 2.9E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Gene3D G3DSA:3.30.565.10 592 745 1.7E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 SUPERFAMILY SSF55785 222 346 9.34E-16 T 11-11-2016 IPR000014 PAS domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 SUPERFAMILY SSF47384 478 518 4.9E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Gene3D G3DSA:3.30.450.20 346 467 3.3E-10 T 11-11-2016 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 SUPERFAMILY SSF55785 372 479 8.05E-13 T 11-11-2016 IPR000014 PAS domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Pfam PF13426 PAS domain 370 468 3.5E-7 T 11-11-2016 IPR000014 PAS domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Pfam PF00512 His Kinase A (phospho-acceptor) domain 485 580 1.4E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 228 354 2.2E-11 T 11-11-2016 IPR000014 PAS domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 354 477 2.1E-9 T 11-11-2016 IPR000014 PAS domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 SUPERFAMILY SSF55874 592 745 5.24E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 634 746 6.7E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Gene3D G3DSA:1.10.287.130 480 511 4.1E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Gene3D G3DSA:1.10.287.130 556 578 4.1E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 SMART SM00091 227 300 1.2E-4 T 11-11-2016 IPR000014 PAS domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 SMART SM00091 356 423 16.0 T 11-11-2016 IPR000014 PAS domain RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 Pfam PF08448 PAS fold 239 349 1.0E-8 T 11-11-2016 IPR013656 PAS fold-4 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 693 703 1.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 731 744 1.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 675 689 1.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11091 fe7917e5e0c0df83b75fe4914c2737ae 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 706 724 1.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11171 34eaf61057b213c520f5e31374e10f35 246 Pfam PF06445 GyrI-like small molecule binding domain 99 238 6.5E-12 T 11-11-2016 IPR029442 GyrI-like small molecule binding domain RB11171 34eaf61057b213c520f5e31374e10f35 246 Gene3D G3DSA:1.10.1660.10 2 83 3.2E-14 T 11-11-2016 RB11171 34eaf61057b213c520f5e31374e10f35 246 Pfam PF13411 MerR HTH family regulatory protein 2 44 2.3E-7 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RB11171 34eaf61057b213c520f5e31374e10f35 246 SUPERFAMILY SSF46955 2 80 2.38E-12 T 11-11-2016 IPR009061 Putative DNA-binding domain RB11171 34eaf61057b213c520f5e31374e10f35 246 SUPERFAMILY SSF55136 98 223 3.35E-15 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain RB11171 34eaf61057b213c520f5e31374e10f35 246 Gene3D G3DSA:3.20.80.10 98 240 2.1E-12 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain RB11171 34eaf61057b213c520f5e31374e10f35 246 SMART SM00871 96 242 3.5E-21 T 11-11-2016 IPR010499 Bacterial transcription activator, effector binding RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 SUPERFAMILY SSF56327 142 296 2.79E-43 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 171 177 - T 11-11-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 SUPERFAMILY SSF51735 1 143 4.84E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 PRINTS PR00086 L-lactate dehydrogenase signature 169 182 1.3E-33 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 1.3E-33 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 1.3E-33 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 PRINTS PR00086 L-lactate dehydrogenase signature 139 157 1.3E-33 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 PRINTS PR00086 L-lactate dehydrogenase signature 115 135 1.3E-33 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 PIRSF PIRSF000102 1 304 2.2E-90 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 144 297 4.6E-21 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 Gene3D G3DSA:3.90.110.10 144 299 2.7E-44 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 2.6E-31 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RB856 c05910b396b9d5ab8e3ed0905252e1b4 304 Gene3D G3DSA:3.40.50.720 1 143 2.6E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5961 9ac823cc3cffda1fd035e9c584c7e85c 206 SUPERFAMILY SSF51161 35 193 6.38E-47 T 11-11-2016 IPR011004 Trimeric LpxA-like RB5961 9ac823cc3cffda1fd035e9c584c7e85c 206 Gene3D G3DSA:2.160.10.10 38 192 2.3E-46 T 11-11-2016 RB5961 9ac823cc3cffda1fd035e9c584c7e85c 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 147 5.0E-7 T 11-11-2016 IPR001451 Hexapeptide repeat RB5961 9ac823cc3cffda1fd035e9c584c7e85c 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 41 70 0.0013 T 11-11-2016 IPR001451 Hexapeptide repeat RB9876 90db270bf8934e21c47628d9a6f36373 389 Pfam PF06969 HemN C-terminal domain 311 375 2.6E-13 T 11-11-2016 IPR010723 HemN, C-terminal RB9876 90db270bf8934e21c47628d9a6f36373 389 SUPERFAMILY SSF102114 7 385 6.54E-100 T 11-11-2016 RB9876 90db270bf8934e21c47628d9a6f36373 389 Gene3D G3DSA:3.80.30.20 14 245 5.9E-36 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB9876 90db270bf8934e21c47628d9a6f36373 389 SMART SM00729 12 231 2.8E-48 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB9876 90db270bf8934e21c47628d9a6f36373 389 Pfam PF04055 Radical SAM superfamily 17 182 2.8E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB9876 90db270bf8934e21c47628d9a6f36373 389 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 14 366 1.7E-84 T 11-11-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 RB2512 4af6088345a7dadbf97351e49c063183 325 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 316 4.8E-115 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2512 4af6088345a7dadbf97351e49c063183 325 Gene3D G3DSA:3.40.50.720 3 188 5.1E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2512 4af6088345a7dadbf97351e49c063183 325 Gene3D G3DSA:3.90.25.10 190 324 6.2E-38 T 11-11-2016 RB2512 4af6088345a7dadbf97351e49c063183 325 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 325 46.698 T 11-11-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 RB2512 4af6088345a7dadbf97351e49c063183 325 SUPERFAMILY SSF51735 3 318 3.11E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11377 f680bd8ba50d9adab493a7e142a7eb00 411 SUPERFAMILY SSF116734 2 189 9.32E-34 T 11-11-2016 RB11377 f680bd8ba50d9adab493a7e142a7eb00 411 SUPERFAMILY SSF116734 203 410 3.11E-25 T 11-11-2016 RB11377 f680bd8ba50d9adab493a7e142a7eb00 411 Pfam PF01420 Type I restriction modification DNA specificity domain 3 177 1.8E-13 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RB149 7aea60b13253d6b1d24738815d719b8c 672 Gene3D G3DSA:1.20.1600.10 161 221 1.4E-43 T 11-11-2016 RB149 7aea60b13253d6b1d24738815d719b8c 672 Gene3D G3DSA:1.20.1600.10 266 626 1.4E-43 T 11-11-2016 RB149 7aea60b13253d6b1d24738815d719b8c 672 Pfam PF02321 Outer membrane efflux protein 254 397 7.6E-13 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB149 7aea60b13253d6b1d24738815d719b8c 672 Pfam PF02321 Outer membrane efflux protein 430 624 1.4E-6 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB149 7aea60b13253d6b1d24738815d719b8c 672 SUPERFAMILY SSF56954 263 638 7.32E-45 T 11-11-2016 RB149 7aea60b13253d6b1d24738815d719b8c 672 SUPERFAMILY SSF56954 165 214 7.32E-45 T 11-11-2016 RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 Gene3D G3DSA:3.30.1390.10 68 140 8.3E-29 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 SUPERFAMILY SSF48300 17 76 7.85E-10 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 75 140 4.0E-22 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 18 64 3.7E-11 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 SUPERFAMILY SSF54736 70 140 8.72E-23 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 Gene3D G3DSA:1.20.5.710 22 61 5.8E-5 T 11-11-2016 RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 TIGRFAM TIGR00855 L12: ribosomal protein bL12 16 140 5.9E-32 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 74 140 1.3E-26 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12842 cd2482d02d919b4f0c0f11c1f794696a 140 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 14 140 19.233 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB10805 f5d39b9c980ab7e8c9a63ab213cf65e2 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 376 6.2E-101 T 11-11-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RB10805 f5d39b9c980ab7e8c9a63ab213cf65e2 386 Gene3D G3DSA:3.40.50.1970 1 190 2.7E-53 T 11-11-2016 RB10805 f5d39b9c980ab7e8c9a63ab213cf65e2 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 179 207 - T 11-11-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RB10805 f5d39b9c980ab7e8c9a63ab213cf65e2 386 Gene3D G3DSA:1.20.1090.10 191 385 2.5E-46 T 11-11-2016 RB10805 f5d39b9c980ab7e8c9a63ab213cf65e2 386 SUPERFAMILY SSF56796 2 384 5.23E-105 T 11-11-2016 RB7166 5fdccae84e1922af6d452e63ee21c9e5 312 SMART SM00382 26 226 1.0E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7166 5fdccae84e1922af6d452e63ee21c9e5 312 Gene3D G3DSA:3.40.50.300 2 222 6.4E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7166 5fdccae84e1922af6d452e63ee21c9e5 312 SUPERFAMILY SSF52540 2 220 4.07E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7166 5fdccae84e1922af6d452e63ee21c9e5 312 Pfam PF00005 ABC transporter 19 160 2.6E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB11395 be1ee4669aee337e2467783b20e7060a 131 Pfam PF03073 TspO/MBR family 5 127 4.1E-25 T 11-11-2016 IPR004307 TspO/MBR-related protein GO:0016021 RB11395 be1ee4669aee337e2467783b20e7060a 131 PIRSF PIRSF005859 1 131 1.6E-33 T 11-11-2016 IPR004307 TspO/MBR-related protein GO:0016021 RB4876 b7cf21ed36bb03f69ebe761216e57970 397 Pfam PF00487 Fatty acid desaturase 137 364 4.2E-19 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RB4876 b7cf21ed36bb03f69ebe761216e57970 397 PRINTS PR00075 Fatty acid desaturase family 1 signature 335 349 4.8E-25 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB4876 b7cf21ed36bb03f69ebe761216e57970 397 PRINTS PR00075 Fatty acid desaturase family 1 signature 292 313 4.8E-25 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB4876 b7cf21ed36bb03f69ebe761216e57970 397 PRINTS PR00075 Fatty acid desaturase family 1 signature 138 160 4.8E-25 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB4876 b7cf21ed36bb03f69ebe761216e57970 397 PRINTS PR00075 Fatty acid desaturase family 1 signature 198 227 4.8E-25 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB4876 b7cf21ed36bb03f69ebe761216e57970 397 PRINTS PR00075 Fatty acid desaturase family 1 signature 161 181 4.8E-25 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB4059 6e1c3907189c3118e26ac970a928fcfc 156 Pfam PF07811 TadE-like protein 29 71 3.3E-9 T 11-11-2016 IPR012495 TadE-like RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 SMART SM01383 43 119 1.5E-40 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 SUPERFAMILY SSF50104 127 273 2.47E-58 T 11-11-2016 IPR008991 Translation protein SH3-like domain RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 Gene3D G3DSA:2.40.50.140 1 115 7.1E-46 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 SMART SM01382 125 253 7.1E-87 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 Gene3D G3DSA:2.30.30.30 120 196 4.6E-29 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 43 117 6.4E-30 T 11-11-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 11-11-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 3.8E-118 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 SUPERFAMILY SSF50249 3 124 4.11E-42 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 Gene3D G3DSA:4.10.950.10 197 275 9.3E-32 T 11-11-2016 IPR014726 Ribosomal protein L2, domain 3 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 45.885 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 251 1.4E-54 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RB7837 e8b5bc1ab4b029acf5dd14c9f65e453f 286 PIRSF PIRSF002158 13 277 9.7E-93 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7769 bbc02d99ea02e72a7bdda0fde38fecd8 501 SUPERFAMILY SSF53649 54 495 2.62E-119 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7769 bbc02d99ea02e72a7bdda0fde38fecd8 501 Gene3D G3DSA:3.40.720.10 54 405 2.7E-102 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7769 bbc02d99ea02e72a7bdda0fde38fecd8 501 Gene3D G3DSA:3.30.1120.10 406 494 9.2E-16 T 11-11-2016 RB7769 bbc02d99ea02e72a7bdda0fde38fecd8 501 Pfam PF00884 Sulfatase 55 393 4.6E-65 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9950 166d0f49b16f3645db0a4d2de9c69b3a 736 SUPERFAMILY SSF141072 328 478 1.7E-19 T 11-11-2016 RB9950 166d0f49b16f3645db0a4d2de9c69b3a 736 Pfam PF03160 Calx-beta domain 325 414 9.1E-8 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB9950 166d0f49b16f3645db0a4d2de9c69b3a 736 SUPERFAMILY SSF63446 554 618 5.98E-7 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB9950 166d0f49b16f3645db0a4d2de9c69b3a 736 SUPERFAMILY SSF55486 147 320 6.07E-17 T 11-11-2016 RB9950 166d0f49b16f3645db0a4d2de9c69b3a 736 Gene3D G3DSA:3.40.390.10 190 249 7.9E-4 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB9950 166d0f49b16f3645db0a4d2de9c69b3a 736 Pfam PF00404 Dockerin type I repeat 556 576 3.9E-6 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB9950 166d0f49b16f3645db0a4d2de9c69b3a 736 Pfam PF00404 Dockerin type I repeat 597 616 4.9E-6 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB9950 166d0f49b16f3645db0a4d2de9c69b3a 736 Gene3D G3DSA:1.10.1330.10 556 616 5.5E-4 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB8418 1b705ff3284025b86ae393429d8c5108 811 Gene3D G3DSA:3.40.50.300 270 459 3.9E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8418 1b705ff3284025b86ae393429d8c5108 811 SUPERFAMILY SSF52540 538 716 2.93E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8418 1b705ff3284025b86ae393429d8c5108 811 SUPERFAMILY SSF52540 271 449 2.99E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8418 1b705ff3284025b86ae393429d8c5108 811 SMART SM00487 269 467 3.4E-20 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB8418 1b705ff3284025b86ae393429d8c5108 811 SMART SM00490 570 667 5.8E-10 T 11-11-2016 IPR001650 Helicase, C-terminal RB8418 1b705ff3284025b86ae393429d8c5108 811 TIGRFAM TIGR00595 priA: primosomal protein N' 297 808 6.2E-190 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RB8418 1b705ff3284025b86ae393429d8c5108 811 Gene3D G3DSA:3.40.50.300 571 710 9.1E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8418 1b705ff3284025b86ae393429d8c5108 811 Gene3D G3DSA:3.40.50.300 492 506 9.1E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8418 1b705ff3284025b86ae393429d8c5108 811 Pfam PF00271 Helicase conserved C-terminal domain 582 666 5.6E-9 T 11-11-2016 IPR001650 Helicase, C-terminal RB8418 1b705ff3284025b86ae393429d8c5108 811 Hamap MF_00983 Probable primosomal protein N' [priA]. 75 810 23.745 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RB8418 1b705ff3284025b86ae393429d8c5108 811 Pfam PF04851 Type III restriction enzyme, res subunit 272 434 1.1E-12 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RB13221 d4cd0615f10f7d9efa2f8c41874c8ea7 322 Gene3D G3DSA:1.20.144.10 120 292 1.9E-7 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB13221 d4cd0615f10f7d9efa2f8c41874c8ea7 322 SUPERFAMILY SSF48317 119 292 8.63E-9 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB10216 3f9e0a472b459d5001fea510d2323569 296 SUPERFAMILY SSF52943 2 294 1.96E-72 T 11-11-2016 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 RB10216 3f9e0a472b459d5001fea510d2323569 296 Gene3D G3DSA:3.40.1380.10 64 192 1.5E-33 T 11-11-2016 RB10216 3f9e0a472b459d5001fea510d2323569 296 Pfam PF00231 ATP synthase 4 294 7.5E-75 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10216 3f9e0a472b459d5001fea510d2323569 296 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 294 4.2E-80 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10216 3f9e0a472b459d5001fea510d2323569 296 Gene3D G3DSA:1.10.287.80 19 60 3.4E-22 T 11-11-2016 RB10216 3f9e0a472b459d5001fea510d2323569 296 Gene3D G3DSA:1.10.287.80 209 243 3.4E-22 T 11-11-2016 RB10216 3f9e0a472b459d5001fea510d2323569 296 Gene3D G3DSA:1.10.287.80 244 289 1.4E-24 T 11-11-2016 RB10216 3f9e0a472b459d5001fea510d2323569 296 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 7.4E-29 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10216 3f9e0a472b459d5001fea510d2323569 296 PRINTS PR00126 ATP synthase gamma subunit signature 272 293 7.4E-29 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10216 3f9e0a472b459d5001fea510d2323569 296 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 7.4E-29 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10216 3f9e0a472b459d5001fea510d2323569 296 PRINTS PR00126 ATP synthase gamma subunit signature 241 260 7.4E-29 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10216 3f9e0a472b459d5001fea510d2323569 296 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 294 31.597 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB8945 08012aee57ef357899c71aaf7b703557 425 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 44 65 2.3E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8945 08012aee57ef357899c71aaf7b703557 425 SUPERFAMILY SSF54523 46 175 4.79E-21 T 11-11-2016 RB8945 08012aee57ef357899c71aaf7b703557 425 Pfam PF07596 Protein of unknown function (DUF1559) 70 376 1.4E-77 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6901 18679805985f51cd131ef6ea94bb31b2 827 Pfam PF07637 Protein of unknown function (DUF1595) 412 472 4.8E-17 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB6901 18679805985f51cd131ef6ea94bb31b2 827 Pfam PF07626 Protein of unknown function (DUF1587) 141 205 5.2E-13 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB6901 18679805985f51cd131ef6ea94bb31b2 827 Pfam PF07631 Protein of unknown function (DUF1592) 480 607 4.3E-41 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB6901 18679805985f51cd131ef6ea94bb31b2 827 Pfam PF07627 Protein of unknown function (DUF1588) 632 728 3.9E-32 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB6901 18679805985f51cd131ef6ea94bb31b2 827 Pfam PF07624 Protein of unknown function (DUF1585) 752 824 2.6E-17 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB6901 18679805985f51cd131ef6ea94bb31b2 827 Pfam PF07635 Planctomycete cytochrome C 57 104 1.5E-7 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB2979 37c75e8a9cdd478e1f387030d85da514 324 Pfam PF01322 Cytochrome C' 277 324 3.5E-6 T 11-11-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 RB2979 37c75e8a9cdd478e1f387030d85da514 324 Gene3D G3DSA:1.20.120.10 213 324 1.7E-10 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 RB2979 37c75e8a9cdd478e1f387030d85da514 324 SUPERFAMILY SSF47175 214 324 2.06E-18 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 RB5509 db7e549c1e3f4f95bc756a85fc8ad0e7 464 Gene3D G3DSA:2.60.40.10 208 268 2.0E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB5509 db7e549c1e3f4f95bc756a85fc8ad0e7 464 SUPERFAMILY SSF49313 208 268 4.87E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB7682 c0459900b85d4ac2560dc925737f737a 495 SUPERFAMILY SSF52374 241 462 3.23E-8 T 11-11-2016 RB10469 f68313f1882ef2ef5ea6e8abb3f1a519 137 Gene3D G3DSA:3.30.230.10 13 137 8.1E-47 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB10469 f68313f1882ef2ef5ea6e8abb3f1a519 137 Pfam PF00380 Ribosomal protein S9/S16 17 137 2.6E-43 T 11-11-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RB10469 f68313f1882ef2ef5ea6e8abb3f1a519 137 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 8 137 29.178 T 11-11-2016 IPR023035 Ribosomal protein S9, bacterial/plastid RB10469 f68313f1882ef2ef5ea6e8abb3f1a519 137 ProSitePatterns PS00360 Ribosomal protein S9 signature. 76 94 - T 11-11-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RB10469 f68313f1882ef2ef5ea6e8abb3f1a519 137 SUPERFAMILY SSF54211 14 137 2.39E-43 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB11219 e8e1c03bbc9df018b6dc10a9cb0d1f11 184 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 6 180 32.198 T 11-11-2016 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 RB11219 e8e1c03bbc9df018b6dc10a9cb0d1f11 184 SUPERFAMILY SSF56399 9 182 1.15E-56 T 11-11-2016 RB11219 e8e1c03bbc9df018b6dc10a9cb0d1f11 184 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 7 172 1.1E-41 T 11-11-2016 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 RB711 40662a75269c3a3467b535b74b80e462 255 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 72 245 5.3E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB711 40662a75269c3a3467b535b74b80e462 255 SUPERFAMILY SSF52266 65 253 1.15E-30 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB711 40662a75269c3a3467b535b74b80e462 255 Gene3D G3DSA:3.40.50.1110 66 252 1.0E-26 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB8770 5139dffc1ef6bc3fa2bc1edd7794ee22 530 Pfam PF01145 SPFH domain / Band 7 family 175 391 2.6E-21 T 11-11-2016 IPR001107 Band 7 domain RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 SMART SM00448 1 115 3.5E-37 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 SUPERFAMILY SSF52172 1 129 6.26E-36 T 11-11-2016 IPR011006 CheY-like superfamily RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 Gene3D G3DSA:3.30.200.20 124 245 1.0E-31 T 11-11-2016 RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 SUPERFAMILY SSF56112 125 404 1.35E-67 T 11-11-2016 IPR011009 Protein kinase-like domain RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 SMART SM00220 138 406 1.1E-57 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 Pfam PF00069 Protein kinase domain 140 394 1.8E-48 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 255 267 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 Gene3D G3DSA:1.10.510.10 246 402 3.6E-38 T 11-11-2016 RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 Pfam PF00072 Response regulator receiver domain 4 115 6.1E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 144 167 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB10329 e6a322a2ec7838fb5e0fd2e4ee3fb499 417 Gene3D G3DSA:3.40.50.2300 1 118 2.9E-35 T 11-11-2016 RB12042 404a522c077d6244bf72abd777e99f3e 444 Gene3D G3DSA:1.10.1060.10 19 107 1.5E-17 T 11-11-2016 RB12042 404a522c077d6244bf72abd777e99f3e 444 Pfam PF02754 Cysteine-rich domain 321 406 7.3E-16 T 11-11-2016 IPR004017 Cysteine-rich domain RB12042 404a522c077d6244bf72abd777e99f3e 444 Pfam PF02754 Cysteine-rich domain 183 265 1.6E-11 T 11-11-2016 IPR004017 Cysteine-rich domain RB12042 404a522c077d6244bf72abd777e99f3e 444 SUPERFAMILY SSF54862 25 119 2.05E-17 T 11-11-2016 RB12042 404a522c077d6244bf72abd777e99f3e 444 Pfam PF13183 4Fe-4S dicluster domain 24 91 3.8E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB12042 404a522c077d6244bf72abd777e99f3e 444 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 27 38 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB12042 404a522c077d6244bf72abd777e99f3e 444 PIRSF PIRSF000139 10 436 2.6E-116 T 11-11-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit RB12042 404a522c077d6244bf72abd777e99f3e 444 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 Gene3D G3DSA:1.10.760.10 1315 1338 3.2E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 Gene3D G3DSA:1.10.760.10 1202 1263 3.2E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 SUPERFAMILY SSF63829 481 670 1.24E-18 T 11-11-2016 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 SUPERFAMILY SSF63829 747 779 1.24E-18 T 11-11-2016 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 469 676 2.0E-44 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 SUPERFAMILY SSF48371 868 973 2.26E-6 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 SUPERFAMILY SSF46626 1035 1147 1.63E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 SUPERFAMILY SSF52266 125 168 2.66E-22 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 SUPERFAMILY SSF52266 198 347 2.66E-22 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 155 337 3.2E-10 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 Gene3D G3DSA:1.25.10.10 868 976 2.0E-6 T 11-11-2016 IPR011989 Armadillo-like helical RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1203 1337 1.9E-23 T 11-11-2016 IPR013427 Haem-binding domain, putative RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 Gene3D G3DSA:3.40.50.1110 126 346 8.5E-24 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 1035 1123 1.2E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 SUPERFAMILY SSF46626 1315 1338 3.77E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 SUPERFAMILY SSF46626 1201 1266 3.77E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 Gene3D G3DSA:1.10.760.10 1036 1154 6.4E-26 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8892 fd8b96f028901e5f39ff9df93f8f7bcc 1360 Gene3D G3DSA:2.120.10.30 463 813 4.6E-25 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB13147 0fc159f5f6b0ef79b79c3c5ee10c2e00 478 Gene3D G3DSA:3.40.720.10 40 359 9.8E-108 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB13147 0fc159f5f6b0ef79b79c3c5ee10c2e00 478 ProSitePatterns PS00149 Sulfatases signature 2. 140 150 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB13147 0fc159f5f6b0ef79b79c3c5ee10c2e00 478 Gene3D G3DSA:3.30.1120.10 360 452 7.6E-19 T 11-11-2016 RB13147 0fc159f5f6b0ef79b79c3c5ee10c2e00 478 Pfam PF14707 C-terminal region of aryl-sulfatase 369 461 2.2E-12 T 11-11-2016 RB13147 0fc159f5f6b0ef79b79c3c5ee10c2e00 478 Pfam PF00884 Sulfatase 43 345 2.1E-71 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB13147 0fc159f5f6b0ef79b79c3c5ee10c2e00 478 SUPERFAMILY SSF53649 39 451 2.62E-121 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 Gene3D G3DSA:2.40.50.140 188 252 1.1E-5 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 Gene3D G3DSA:2.40.50.140 263 335 1.0E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 Gene3D G3DSA:2.40.50.140 429 510 4.9E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 Gene3D G3DSA:2.40.50.140 338 428 7.3E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 Pfam PF00575 S1 RNA binding domain 267 333 3.4E-5 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 Pfam PF00575 S1 RNA binding domain 438 509 3.5E-18 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 Pfam PF00575 S1 RNA binding domain 352 423 3.8E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 SMART SM00316 438 509 1.9E-21 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 SMART SM00316 189 253 1.4E-4 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 SMART SM00316 353 423 2.8E-25 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 SMART SM00316 266 334 3.4E-9 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 SUPERFAMILY SSF50249 341 440 4.33E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 SUPERFAMILY SSF50249 266 347 4.55E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 SUPERFAMILY SSF50249 186 252 4.25E-8 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 PRINTS PR00681 Ribosomal protein S1 signature 453 472 2.1E-40 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 PRINTS PR00681 Ribosomal protein S1 signature 318 338 2.1E-40 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 PRINTS PR00681 Ribosomal protein S1 signature 271 287 2.1E-40 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 PRINTS PR00681 Ribosomal protein S1 signature 289 306 2.1E-40 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 PRINTS PR00681 Ribosomal protein S1 signature 375 396 2.1E-40 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 PRINTS PR00681 Ribosomal protein S1 signature 191 209 2.1E-40 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 PRINTS PR00681 Ribosomal protein S1 signature 492 510 2.1E-40 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 PRINTS PR00681 Ribosomal protein S1 signature 209 223 2.1E-40 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB2024 2f41c54398ee6e5b7f690316ce9ec215 560 SUPERFAMILY SSF50249 418 517 3.28E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB7061 9cf26533fced8c4fd03cc01693ee605b 559 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 223 394 3.1E-11 T 11-11-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase RB7061 9cf26533fced8c4fd03cc01693ee605b 559 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 488 554 6.6E-19 T 11-11-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase RB7061 9cf26533fced8c4fd03cc01693ee605b 559 SUPERFAMILY SSF46626 488 555 9.46E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7061 9cf26533fced8c4fd03cc01693ee605b 559 SUPERFAMILY SSF46626 349 395 9.46E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7061 9cf26533fced8c4fd03cc01693ee605b 559 Gene3D G3DSA:1.10.760.10 349 387 3.6E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7061 9cf26533fced8c4fd03cc01693ee605b 559 Gene3D G3DSA:1.10.760.10 492 556 3.6E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7061 9cf26533fced8c4fd03cc01693ee605b 559 Gene3D G3DSA:1.10.760.10 446 451 3.6E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7885 de41aea36ceea283a5a418fa5c7112f0 351 SUPERFAMILY SSF53659 9 350 2.59E-96 T 11-11-2016 RB7885 de41aea36ceea283a5a418fa5c7112f0 351 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 40 349 5.2E-102 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RB7885 de41aea36ceea283a5a418fa5c7112f0 351 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 10 350 2.9E-107 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RB7885 de41aea36ceea283a5a418fa5c7112f0 351 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 7 351 33.934 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 RB7885 de41aea36ceea283a5a418fa5c7112f0 351 Gene3D G3DSA:3.40.718.10 5 350 2.2E-118 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB8399 40ebef90f85e323c8ddf021f24437565 211 SUPERFAMILY SSF52540 1 141 3.87E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8399 40ebef90f85e323c8ddf021f24437565 211 SUPERFAMILY SSF57716 142 194 6.65E-17 T 11-11-2016 RB8399 40ebef90f85e323c8ddf021f24437565 211 Pfam PF00265 Thymidine kinase 2 186 5.4E-57 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RB8399 40ebef90f85e323c8ddf021f24437565 211 Gene3D G3DSA:3.30.60.20 142 190 1.4E-18 T 11-11-2016 RB8399 40ebef90f85e323c8ddf021f24437565 211 PIRSF PIRSF035805 1 199 9.4E-62 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RB8399 40ebef90f85e323c8ddf021f24437565 211 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.915 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RB8399 40ebef90f85e323c8ddf021f24437565 211 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-11-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RB8222 b8de817e55c05ebab6644625db7307f1 623 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 417 619 7.2E-82 T 11-11-2016 IPR010743 Methionine biosynthesis MetW RB8222 b8de817e55c05ebab6644625db7307f1 623 Gene3D G3DSA:3.40.50.1820 58 387 6.9E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8222 b8de817e55c05ebab6644625db7307f1 623 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 47 399 1.9E-139 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 RB8222 b8de817e55c05ebab6644625db7307f1 623 Pfam PF07021 Methionine biosynthesis protein MetW 418 615 1.9E-44 T 11-11-2016 IPR010743 Methionine biosynthesis MetW RB8222 b8de817e55c05ebab6644625db7307f1 623 SUPERFAMILY SSF53474 45 399 4.09E-90 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8222 b8de817e55c05ebab6644625db7307f1 623 Pfam PF00561 alpha/beta hydrolase fold 77 385 1.7E-27 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB8222 b8de817e55c05ebab6644625db7307f1 623 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 30 403 43.409 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 RB8222 b8de817e55c05ebab6644625db7307f1 623 SUPERFAMILY SSF53335 421 597 1.79E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8222 b8de817e55c05ebab6644625db7307f1 623 Gene3D G3DSA:3.40.50.150 421 583 1.1E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8 7025263347ac0f5a096f6dc91f60cf6b 1176 Gene3D G3DSA:3.40.50.300 712 882 2.6E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8 7025263347ac0f5a096f6dc91f60cf6b 1176 SUPERFAMILY SSF52540 705 923 5.32E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8 7025263347ac0f5a096f6dc91f60cf6b 1176 Gene3D G3DSA:3.40.50.300 1003 1146 3.3E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8 7025263347ac0f5a096f6dc91f60cf6b 1176 SUPERFAMILY SSF52540 924 1172 1.16E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8 7025263347ac0f5a096f6dc91f60cf6b 1176 Pfam PF00176 SNF2 family N-terminal domain 734 997 6.3E-53 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RB8 7025263347ac0f5a096f6dc91f60cf6b 1176 SMART SM00490 1036 1118 2.6E-22 T 11-11-2016 IPR001650 Helicase, C-terminal RB8 7025263347ac0f5a096f6dc91f60cf6b 1176 Pfam PF00271 Helicase conserved C-terminal domain 1007 1118 2.6E-18 T 11-11-2016 IPR001650 Helicase, C-terminal RB8 7025263347ac0f5a096f6dc91f60cf6b 1176 SMART SM00487 712 903 2.2E-21 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 SUPERFAMILY SSF51735 43 233 2.02E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 PIRSF PIRSF500136 33 468 4.0E-139 T 11-11-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 PIRSF PIRSF000124 42 463 5.2E-61 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 Gene3D G3DSA:3.40.50.720 37 260 1.2E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 SMART SM00984 357 457 4.8E-28 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 358 455 9.0E-19 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 SUPERFAMILY SSF52413 344 454 6.02E-25 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 SUPERFAMILY SSF48179 239 336 7.31E-30 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 240 330 8.0E-29 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 Gene3D G3DSA:3.40.50.720 270 455 1.3E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 43 453 1.0E-127 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RB2515 cc3a86a6f7d44e3bf68f58f667506bf8 469 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 43 219 5.5E-42 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB2135 2acc1ab8a766fc4657d481dabd3a9f1d 488 Gene3D G3DSA:3.40.720.10 199 379 2.5E-70 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2135 2acc1ab8a766fc4657d481dabd3a9f1d 488 Gene3D G3DSA:3.40.720.10 6 161 2.5E-70 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2135 2acc1ab8a766fc4657d481dabd3a9f1d 488 ProSitePatterns PS00149 Sulfatases signature 2. 100 110 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB2135 2acc1ab8a766fc4657d481dabd3a9f1d 488 Gene3D G3DSA:3.30.1120.10 436 485 4.6E-20 T 11-11-2016 RB2135 2acc1ab8a766fc4657d481dabd3a9f1d 488 Gene3D G3DSA:3.30.1120.10 380 399 4.6E-20 T 11-11-2016 RB2135 2acc1ab8a766fc4657d481dabd3a9f1d 488 SUPERFAMILY SSF53649 6 312 9.77E-98 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2135 2acc1ab8a766fc4657d481dabd3a9f1d 488 SUPERFAMILY SSF53649 343 487 9.77E-98 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2135 2acc1ab8a766fc4657d481dabd3a9f1d 488 Pfam PF00884 Sulfatase 6 306 2.8E-49 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2142 d07c48800e59e85c767fa68ae0d3b584 311 SUPERFAMILY SSF111331 69 303 7.59E-75 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RB2142 d07c48800e59e85c767fa68ae0d3b584 311 Gene3D G3DSA:3.40.50.10330 74 156 4.0E-25 T 11-11-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RB2142 d07c48800e59e85c767fa68ae0d3b584 311 Pfam PF01513 ATP-NAD kinase 70 286 5.2E-54 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RB2142 d07c48800e59e85c767fa68ae0d3b584 311 Gene3D G3DSA:2.60.200.30 157 278 1.9E-39 T 11-11-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RB2142 d07c48800e59e85c767fa68ae0d3b584 311 Hamap MF_00361 NAD kinase [nadK]. 33 302 29.335 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RB9854 e8720e005488bd5b03f93f281efe9a14 564 SMART SM00220 105 367 6.5E-59 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9854 e8720e005488bd5b03f93f281efe9a14 564 Pfam PF00069 Protein kinase domain 107 358 1.6E-46 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB9854 e8720e005488bd5b03f93f281efe9a14 564 Gene3D G3DSA:3.30.200.20 83 212 3.5E-31 T 11-11-2016 RB9854 e8720e005488bd5b03f93f281efe9a14 564 SUPERFAMILY SSF56112 89 361 5.4E-74 T 11-11-2016 IPR011009 Protein kinase-like domain RB9854 e8720e005488bd5b03f93f281efe9a14 564 Gene3D G3DSA:1.10.510.10 213 360 4.8E-41 T 11-11-2016 RB9854 e8720e005488bd5b03f93f281efe9a14 564 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 223 235 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB9854 e8720e005488bd5b03f93f281efe9a14 564 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 111 134 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 Gene3D G3DSA:3.40.50.2300 53 204 2.2E-25 T 11-11-2016 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 SMART SM00448 55 168 4.4E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 SMART SM00387 330 444 5.4E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 7.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 7.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 7.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 7.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 443 8.5E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 SMART SM00388 216 284 1.0E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 Pfam PF00072 Response regulator receiver domain 57 158 4.5E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 284 6.1E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 SUPERFAMILY SSF55874 273 442 7.07E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 Gene3D G3DSA:3.30.565.10 291 442 7.3E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 SUPERFAMILY SSF52172 53 197 1.25E-27 T 11-11-2016 IPR011006 CheY-like superfamily RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 Gene3D G3DSA:1.10.287.130 208 280 9.9E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB5479 4dd4b499ddb018c0b83a51e0e8591e90 574 SUPERFAMILY SSF47384 202 284 9.61E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB9657 9d01303ae85d30efdb87d8aaa600f1a9 359 PRINTS PR00069 Aldo-keto reductase signature 56 80 8.4E-5 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RB9657 9d01303ae85d30efdb87d8aaa600f1a9 359 PRINTS PR00069 Aldo-keto reductase signature 115 133 8.4E-5 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RB9657 9d01303ae85d30efdb87d8aaa600f1a9 359 PRINTS PR00069 Aldo-keto reductase signature 156 173 8.4E-5 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RB9657 9d01303ae85d30efdb87d8aaa600f1a9 359 SUPERFAMILY SSF51430 17 317 6.94E-55 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB9657 9d01303ae85d30efdb87d8aaa600f1a9 359 Pfam PF00248 Aldo/keto reductase family 48 316 1.3E-39 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB9657 9d01303ae85d30efdb87d8aaa600f1a9 359 Gene3D G3DSA:3.20.20.100 17 320 1.5E-49 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB7565 33561fc8db81a7a8853187c41bcf0a22 428 Pfam PF01757 Acyltransferase family 25 382 1.1E-24 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 396 419 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 Pfam PF13932 GidA associated domain 429 628 1.7E-64 T 11-11-2016 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 Gene3D G3DSA:3.50.50.60 24 202 3.8E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 26 635 2.5E-250 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 SMART SM01228 559 630 1.6E-36 T 11-11-2016 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 Pfam PF01134 Glucose inhibited division protein A 27 426 2.3E-162 T 11-11-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 SUPERFAMILY SSF51905 116 289 1.09E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 SUPERFAMILY SSF51905 25 85 1.09E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 301 315 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 189 3.6E-6 T 11-11-2016 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 27 49 3.6E-6 T 11-11-2016 RB9255 e4b0c19303603f56fb9c11bf082b4710 667 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 24 637 41.083 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RB12393 dc228e08e620790626dab8a66e0151bc 668 Pfam PF13435 Cytochrome c554 and c-prime 233 272 4.5E-4 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB12393 dc228e08e620790626dab8a66e0151bc 668 SUPERFAMILY SSF48695 381 568 1.91E-46 T 11-11-2016 IPR011031 Multihaem cytochrome RB12393 dc228e08e620790626dab8a66e0151bc 668 SUPERFAMILY SSF48695 92 115 1.91E-46 T 11-11-2016 IPR011031 Multihaem cytochrome RB12393 dc228e08e620790626dab8a66e0151bc 668 SUPERFAMILY SSF48695 173 335 1.91E-46 T 11-11-2016 IPR011031 Multihaem cytochrome RB12393 dc228e08e620790626dab8a66e0151bc 668 Gene3D G3DSA:1.10.710.10 92 135 5.4E-35 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB12393 dc228e08e620790626dab8a66e0151bc 668 Gene3D G3DSA:1.10.710.10 226 322 5.4E-35 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB12393 dc228e08e620790626dab8a66e0151bc 668 Gene3D G3DSA:1.10.710.10 391 510 5.4E-35 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB5674 e952ac713370d814a7cf17182e430c51 237 Gene3D G3DSA:3.60.21.10 2 208 3.9E-47 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5674 e952ac713370d814a7cf17182e430c51 237 SUPERFAMILY SSF56300 2 196 3.93E-41 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5674 e952ac713370d814a7cf17182e430c51 237 Pfam PF00149 Calcineurin-like phosphoesterase 5 157 6.4E-14 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB7678 25978d2b59927dff635231e866c5f764 226 Pfam PF00775 Dioxygenase 44 219 1.0E-21 T 11-11-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RB7678 25978d2b59927dff635231e866c5f764 226 Gene3D G3DSA:2.60.130.10 34 221 2.9E-54 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RB7678 25978d2b59927dff635231e866c5f764 226 SUPERFAMILY SSF49482 35 221 4.84E-50 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SUPERFAMILY SSF82171 459 768 7.85E-36 T 11-11-2016 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 Pfam PF00069 Protein kinase domain 29 309 3.7E-42 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SMART SM00220 29 319 1.9E-38 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SMART SM00320 544 579 11.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SMART SM00320 715 757 0.032 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SMART SM00320 667 706 1.3 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SMART SM00320 974 1013 0.011 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SMART SM00320 453 492 0.029 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 35 58 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 Gene3D G3DSA:2.130.10.10 450 607 5.8E-40 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 Gene3D G3DSA:2.130.10.10 974 1014 5.8E-40 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 Gene3D G3DSA:2.130.10.10 653 759 5.8E-40 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SUPERFAMILY SSF56112 26 123 7.85E-68 T 11-11-2016 IPR011009 Protein kinase-like domain RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SUPERFAMILY SSF56112 153 343 7.85E-68 T 11-11-2016 IPR011009 Protein kinase-like domain RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 177 189 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 744 758 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SUPERFAMILY SSF50978 677 762 9.16E-23 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SUPERFAMILY SSF50978 943 1046 9.16E-23 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 SUPERFAMILY SSF50978 859 909 9.16E-23 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB1892 5b538e139f86bc138b1b52c362e3b89d 1073 Gene3D G3DSA:1.10.510.10 72 320 4.2E-41 T 11-11-2016 RB12047 3825ebfa087db170b16c598c956cb32e 485 Gene3D G3DSA:3.40.50.300 2 223 6.7E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12047 3825ebfa087db170b16c598c956cb32e 485 Pfam PF00271 Helicase conserved C-terminal domain 243 351 9.0E-30 T 11-11-2016 IPR001650 Helicase, C-terminal RB12047 3825ebfa087db170b16c598c956cb32e 485 Gene3D G3DSA:3.40.50.300 224 379 1.2E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12047 3825ebfa087db170b16c598c956cb32e 485 SMART SM00490 270 351 3.5E-35 T 11-11-2016 IPR001650 Helicase, C-terminal RB12047 3825ebfa087db170b16c598c956cb32e 485 SUPERFAMILY SSF52540 86 373 5.45E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12047 3825ebfa087db170b16c598c956cb32e 485 SMART SM00487 21 234 1.6E-64 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB12047 3825ebfa087db170b16c598c956cb32e 485 Pfam PF00270 DEAD/DEAH box helicase 26 207 1.4E-50 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB752 3e36cb594e464937286295d2f3482916 1026 Pfam PF13502 AsmA-like C-terminal region 761 984 5.9E-26 T 11-11-2016 IPR032712 AsmA-like, C-terminal RB1376 3ba50d98a70bcb3f959f8ae514ada06c 933 SUPERFAMILY SSF52047 543 643 2.47E-15 T 11-11-2016 RB1376 3ba50d98a70bcb3f959f8ae514ada06c 933 SUPERFAMILY SSF52047 260 508 2.47E-15 T 11-11-2016 RB1376 3ba50d98a70bcb3f959f8ae514ada06c 933 Gene3D G3DSA:3.80.10.10 552 632 1.2E-28 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB1376 3ba50d98a70bcb3f959f8ae514ada06c 933 Gene3D G3DSA:3.80.10.10 260 508 1.1E-5 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB1376 3ba50d98a70bcb3f959f8ae514ada06c 933 Gene3D G3DSA:3.80.10.10 718 855 1.2E-28 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB1376 3ba50d98a70bcb3f959f8ae514ada06c 933 SUPERFAMILY SSF52047 695 850 1.8E-23 T 11-11-2016 RB1376 3ba50d98a70bcb3f959f8ae514ada06c 933 SUPERFAMILY SSF52047 559 633 1.8E-23 T 11-11-2016 RB9550 b367f853c4941b2ca3f8c4f0d617ab62 244 SUPERFAMILY SSF51197 4 233 1.28E-30 T 11-11-2016 RB9550 b367f853c4941b2ca3f8c4f0d617ab62 244 Gene3D G3DSA:2.60.120.620 5 223 1.0E-21 T 11-11-2016 RB9550 b367f853c4941b2ca3f8c4f0d617ab62 244 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 7 204 5.0E-10 T 11-11-2016 IPR008775 Phytanoyl-CoA dioxygenase RB9823 e9f758d1b58a7d9162428e2101c053c0 419 Pfam PF00571 CBS domain 274 319 4.6E-4 T 11-11-2016 IPR000644 CBS domain RB9823 e9f758d1b58a7d9162428e2101c053c0 419 Pfam PF00571 CBS domain 333 381 3.1E-8 T 11-11-2016 IPR000644 CBS domain RB9823 e9f758d1b58a7d9162428e2101c053c0 419 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 106 375 1.2E-75 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RB9823 e9f758d1b58a7d9162428e2101c053c0 419 Gene3D G3DSA:3.40.50.10490 74 256 7.2E-41 T 11-11-2016 RB9823 e9f758d1b58a7d9162428e2101c053c0 419 SUPERFAMILY SSF53697 66 368 8.45E-51 T 11-11-2016 RB9823 e9f758d1b58a7d9162428e2101c053c0 419 SMART SM00116 337 385 5.5E-8 T 11-11-2016 IPR000644 CBS domain RB9823 e9f758d1b58a7d9162428e2101c053c0 419 SMART SM00116 270 319 8.1 T 11-11-2016 IPR000644 CBS domain RB9823 e9f758d1b58a7d9162428e2101c053c0 419 Gene3D G3DSA:3.10.580.10 257 381 3.0E-25 T 11-11-2016 RB9823 e9f758d1b58a7d9162428e2101c053c0 419 Pfam PF01380 SIS domain 103 232 6.4E-25 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RB4673 546dce9b5484adb3badbd555787a40e5 178 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 14 168 41.98 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RB4673 546dce9b5484adb3badbd555787a40e5 178 Gene3D G3DSA:3.30.420.10 16 168 1.0E-49 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB4673 546dce9b5484adb3badbd555787a40e5 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 153 165 1.0E-23 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RB4673 546dce9b5484adb3badbd555787a40e5 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 97 113 1.0E-23 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RB4673 546dce9b5484adb3badbd555787a40e5 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 17 30 1.0E-23 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RB4673 546dce9b5484adb3badbd555787a40e5 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 121 140 1.0E-23 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RB4673 546dce9b5484adb3badbd555787a40e5 178 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 127 162 - T 11-11-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RB4673 546dce9b5484adb3badbd555787a40e5 178 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 16 164 1.9E-33 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RB4673 546dce9b5484adb3badbd555787a40e5 178 SUPERFAMILY SSF53098 15 171 1.74E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB4673 546dce9b5484adb3badbd555787a40e5 178 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 16 164 1.7E-40 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 Gene3D G3DSA:2.40.10.10 76 186 7.6E-30 T 11-11-2016 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 Pfam PF13180 PDZ domain 317 395 3.2E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 Gene3D G3DSA:2.40.10.10 187 299 2.9E-43 T 11-11-2016 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 Pfam PF13365 Trypsin-like peptidase domain 120 258 4.9E-31 T 11-11-2016 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 SUPERFAMILY SSF50156 255 386 2.26E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 SMART SM00228 297 386 1.6E-5 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 Gene3D G3DSA:2.30.42.10 300 397 2.4E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 2.0E-46 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 PRINTS PR00834 HtrA/DegQ protease family signature 344 356 2.0E-46 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 PRINTS PR00834 HtrA/DegQ protease family signature 150 170 2.0E-46 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 2.0E-46 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 2.0E-46 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 2.0E-46 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB6490 9da0b84271551bf141d55a3b3a1b7c1e 399 SUPERFAMILY SSF50494 86 293 7.76E-57 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB3413 3fc8e4d041afd593172a896bec54aa15 373 ProSitePatterns PS00018 EF-hand calcium-binding domain. 67 79 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB3413 3fc8e4d041afd593172a896bec54aa15 373 ProSitePatterns PS00018 EF-hand calcium-binding domain. 44 56 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB3413 3fc8e4d041afd593172a896bec54aa15 373 Gene3D G3DSA:1.10.238.10 29 94 2.3E-7 T 11-11-2016 IPR011992 EF-hand domain pair RB3413 3fc8e4d041afd593172a896bec54aa15 373 Gene3D G3DSA:3.40.50.1820 102 368 2.4E-75 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3413 3fc8e4d041afd593172a896bec54aa15 373 SUPERFAMILY SSF47473 36 96 2.41E-8 T 11-11-2016 IPR011992 EF-hand domain pair RB3413 3fc8e4d041afd593172a896bec54aa15 373 Pfam PF13202 EF hand 62 78 2.2E-4 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB3413 3fc8e4d041afd593172a896bec54aa15 373 Pfam PF13202 EF hand 44 56 0.043 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 RB3413 3fc8e4d041afd593172a896bec54aa15 373 Pfam PF07859 alpha/beta hydrolase fold 137 348 8.7E-23 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB3413 3fc8e4d041afd593172a896bec54aa15 373 SUPERFAMILY SSF53474 94 349 1.62E-54 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7190 005a9e28a8fe65f201824f26b869babb 634 Pfam PF00498 FHA domain 42 103 1.9E-20 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB7190 005a9e28a8fe65f201824f26b869babb 634 SUPERFAMILY SSF49879 18 113 1.42E-28 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB7190 005a9e28a8fe65f201824f26b869babb 634 SMART SM00331 361 585 2.3E-43 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB7190 005a9e28a8fe65f201824f26b869babb 634 SMART SM00065 186 334 2.6E-14 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB7190 005a9e28a8fe65f201824f26b869babb 634 Gene3D G3DSA:2.60.200.20 18 111 1.1E-26 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB7190 005a9e28a8fe65f201824f26b869babb 634 SUPERFAMILY SSF81606 369 528 1.41E-8 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB7190 005a9e28a8fe65f201824f26b869babb 634 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 387 585 5.2E-42 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB7190 005a9e28a8fe65f201824f26b869babb 634 Gene3D G3DSA:3.30.450.40 166 337 3.1E-29 T 11-11-2016 IPR029016 GAF domain-like RB7190 005a9e28a8fe65f201824f26b869babb 634 SMART SM00240 39 89 1.1E-11 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB7190 005a9e28a8fe65f201824f26b869babb 634 SUPERFAMILY SSF55781 170 351 2.4E-28 T 11-11-2016 IPR029016 GAF domain-like RB7190 005a9e28a8fe65f201824f26b869babb 634 Pfam PF13185 GAF domain 185 324 1.7E-12 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB12092 7e75fe5b4a5f050be3d26f2cdb1b4988 616 Pfam PF00884 Sulfatase 57 368 3.3E-72 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB12092 7e75fe5b4a5f050be3d26f2cdb1b4988 616 SUPERFAMILY SSF53649 56 470 6.69E-127 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB12092 7e75fe5b4a5f050be3d26f2cdb1b4988 616 Gene3D G3DSA:3.30.1120.10 414 471 7.8E-12 T 11-11-2016 RB12092 7e75fe5b4a5f050be3d26f2cdb1b4988 616 Gene3D G3DSA:3.40.720.10 54 390 6.3E-106 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9526 c5583184403406c52c212cb07cc2c406 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 137 317 5.9E-9 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB9526 c5583184403406c52c212cb07cc2c406 397 Pfam PF13533 Biotin-lipoyl like 90 136 3.2E-9 T 11-11-2016 RB9526 c5583184403406c52c212cb07cc2c406 397 Gene3D G3DSA:2.40.50.100 95 122 2.3E-11 T 11-11-2016 RB9526 c5583184403406c52c212cb07cc2c406 397 Gene3D G3DSA:2.40.50.100 239 264 2.3E-11 T 11-11-2016 RB9526 c5583184403406c52c212cb07cc2c406 397 SUPERFAMILY SSF111369 219 279 1.7E-7 T 11-11-2016 RB9526 c5583184403406c52c212cb07cc2c406 397 SUPERFAMILY SSF111369 95 148 6.02E-6 T 11-11-2016 RB9526 c5583184403406c52c212cb07cc2c406 397 SUPERFAMILY SSF111369 153 214 1.27E-5 T 11-11-2016 RB11473 dbd42624e111ac045015df535e2a9b17 223 Gene3D G3DSA:1.10.1740.10 65 147 5.2E-14 T 11-11-2016 RB11473 dbd42624e111ac045015df535e2a9b17 223 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 57 213 1.4E-44 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB11473 dbd42624e111ac045015df535e2a9b17 223 Pfam PF08281 Sigma-70, region 4 161 209 5.3E-6 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11473 dbd42624e111ac045015df535e2a9b17 223 Pfam PF04542 Sigma-70 region 2 66 128 5.5E-8 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11473 dbd42624e111ac045015df535e2a9b17 223 SUPERFAMILY SSF88659 159 215 8.97E-9 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11473 dbd42624e111ac045015df535e2a9b17 223 SUPERFAMILY SSF88946 61 147 5.49E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11473 dbd42624e111ac045015df535e2a9b17 223 Gene3D G3DSA:1.10.10.10 161 214 5.5E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11473 dbd42624e111ac045015df535e2a9b17 223 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 63 212 1.0E-17 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7317 de8130836a83a26a02ceaac6deb71b94 452 Gene3D G3DSA:3.40.50.300 259 406 7.9E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7317 de8130836a83a26a02ceaac6deb71b94 452 SMART SM00490 298 380 7.5E-31 T 11-11-2016 IPR001650 Helicase, C-terminal RB7317 de8130836a83a26a02ceaac6deb71b94 452 SMART SM00487 63 262 7.3E-62 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB7317 de8130836a83a26a02ceaac6deb71b94 452 Pfam PF00271 Helicase conserved C-terminal domain 271 380 3.7E-29 T 11-11-2016 IPR001650 Helicase, C-terminal RB7317 de8130836a83a26a02ceaac6deb71b94 452 Gene3D G3DSA:3.40.50.300 38 258 2.2E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7317 de8130836a83a26a02ceaac6deb71b94 452 SUPERFAMILY SSF52540 114 402 2.18E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7317 de8130836a83a26a02ceaac6deb71b94 452 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 193 201 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RB7317 de8130836a83a26a02ceaac6deb71b94 452 Pfam PF00270 DEAD/DEAH box helicase 69 235 6.1E-49 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB2637 00e92f5c89ae2c49e23e9100486fafb2 240 SUPERFAMILY SSF53098 48 153 1.08E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB2637 00e92f5c89ae2c49e23e9100486fafb2 240 Gene3D G3DSA:3.30.420.10 47 152 1.1E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB3641 90d169d00da0652f473304f0cce9e7ea 671 SUPERFAMILY SSF75011 585 653 1.44E-11 T 11-11-2016 RB3641 90d169d00da0652f473304f0cce9e7ea 671 SUPERFAMILY SSF75011 411 535 1.44E-11 T 11-11-2016 RB3641 90d169d00da0652f473304f0cce9e7ea 671 Gene3D G3DSA:2.130.10.10 422 535 1.8E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB3641 90d169d00da0652f473304f0cce9e7ea 671 Gene3D G3DSA:2.130.10.10 592 643 1.8E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB3641 90d169d00da0652f473304f0cce9e7ea 671 Pfam PF10282 Lactonase, 7-bladed beta-propeller 48 422 9.7E-121 T 11-11-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 RB3641 90d169d00da0652f473304f0cce9e7ea 671 SUPERFAMILY SSF51004 41 424 1.15E-49 T 11-11-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RB3641 90d169d00da0652f473304f0cce9e7ea 671 Gene3D G3DSA:2.130.10.10 48 421 1.4E-107 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 561 694 3.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SUPERFAMILY SSF55785 309 426 6.46E-17 T 11-11-2016 IPR000014 PAS domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 513 4.7E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Gene3D G3DSA:3.30.450.20 189 309 4.1E-14 T 11-11-2016 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Pfam PF01627 Hpt domain 1075 1133 1.6E-7 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SUPERFAMILY SSF55874 502 594 6.68E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SUPERFAMILY SSF55874 621 694 6.68E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SMART SM00387 560 697 2.3E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 675 1.7E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 636 1.7E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 694 1.7E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 650 1.7E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Gene3D G3DSA:3.30.565.10 500 694 1.0E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Pfam PF08448 PAS fold 211 314 6.4E-16 T 11-11-2016 IPR013656 PAS fold-4 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Pfam PF00072 Response regulator receiver domain 879 992 1.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SMART SM00448 876 992 1.8E-38 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SMART SM00091 324 390 5.5E-6 T 11-11-2016 IPR000014 PAS domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SMART SM00091 198 264 4.8 T 11-11-2016 IPR000014 PAS domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SUPERFAMILY SSF47384 433 514 1.12E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Gene3D G3DSA:3.30.450.20 310 426 2.9E-16 T 11-11-2016 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 195 317 1.9E-7 T 11-11-2016 IPR000014 PAS domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 320 428 3.2E-7 T 11-11-2016 IPR000014 PAS domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SUPERFAMILY SSF47226 1054 1137 5.76E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SUPERFAMILY SSF47226 975 988 5.76E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SMART SM00388 448 513 2.6E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SUPERFAMILY SSF55785 183 310 1.17E-17 T 11-11-2016 IPR000014 PAS domain RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Pfam PF00989 PAS fold 325 379 3.6E-7 T 11-11-2016 IPR013767 PAS fold GO:0006355 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 SUPERFAMILY SSF52172 874 1002 1.85E-38 T 11-11-2016 IPR011006 CheY-like superfamily RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Gene3D G3DSA:1.10.287.130 441 499 3.5E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Gene3D G3DSA:1.20.120.160 1066 1141 6.0E-10 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB11986 6b16352f6790e9fece091ea94dcd5baf 1182 Gene3D G3DSA:3.40.50.2300 874 1001 3.1E-39 T 11-11-2016 RB695 005226ac7449789f7af4d6b0312d776a 889 ProSitePatterns PS00523 Sulfatases signature 1. 314 326 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB695 005226ac7449789f7af4d6b0312d776a 889 Pfam PF00884 Sulfatase 267 602 5.7E-68 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB695 005226ac7449789f7af4d6b0312d776a 889 Gene3D G3DSA:3.30.1120.10 627 713 3.8E-16 T 11-11-2016 RB695 005226ac7449789f7af4d6b0312d776a 889 Pfam PF06439 Domain of Unknown Function (DUF1080) 61 249 8.5E-36 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB695 005226ac7449789f7af4d6b0312d776a 889 SUPERFAMILY SSF53649 265 710 7.85E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB695 005226ac7449789f7af4d6b0312d776a 889 Gene3D G3DSA:3.40.720.10 264 624 5.1E-106 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 Gene3D G3DSA:3.40.50.720 2 252 1.8E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 SUPERFAMILY SSF51735 2 250 1.48E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 5.8E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 5.8E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.8E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.1E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 7.1E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.1E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.1E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 7.1E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 7.1E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4432 682d1de75c8bb21a7a3a39b53f72e53e 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.4E-52 T 11-11-2016 RB201 e2e61e5f639ca2e153089ea737c4afda 288 Pfam PF01261 Xylose isomerase-like TIM barrel 48 249 2.1E-36 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB201 e2e61e5f639ca2e153089ea737c4afda 288 SUPERFAMILY SSF51658 41 284 2.62E-60 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB201 e2e61e5f639ca2e153089ea737c4afda 288 Gene3D G3DSA:3.20.20.150 21 286 1.9E-70 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8125 9097aaf4e65a82183e07899fa75ed9b8 277 SUPERFAMILY SSF51735 16 260 1.16E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8125 9097aaf4e65a82183e07899fa75ed9b8 277 PIRSF PIRSF000094 11 266 2.4E-53 T 11-11-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RB8125 9097aaf4e65a82183e07899fa75ed9b8 277 Gene3D G3DSA:3.40.50.720 14 260 9.6E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8125 9097aaf4e65a82183e07899fa75ed9b8 277 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 259 2.3E-50 T 11-11-2016 RB745 8a5f6d399c2fe4ef1f1d9d4ea0140e36 296 Pfam PF01738 Dienelactone hydrolase family 84 294 3.4E-50 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 RB745 8a5f6d399c2fe4ef1f1d9d4ea0140e36 296 SUPERFAMILY SSF53474 69 295 7.52E-48 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB745 8a5f6d399c2fe4ef1f1d9d4ea0140e36 296 Gene3D G3DSA:3.40.50.1820 68 293 1.7E-56 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 401 609 1.9E-50 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 SUPERFAMILY SSF49785 452 617 2.98E-45 T 11-11-2016 IPR008979 Galactose-binding domain-like RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 84 603 6.2E-23 T 11-11-2016 IPR005674 CocE/Serine esterase GO:0016787 RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 Gene3D G3DSA:3.40.50.1820 335 415 9.0E-52 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 Gene3D G3DSA:3.40.50.1820 146 264 9.0E-52 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 Gene3D G3DSA:3.40.50.1820 60 114 9.0E-52 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 SMART SM00939 389 612 1.1E-46 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 Gene3D G3DSA:2.60.120.260 416 616 3.0E-54 T 11-11-2016 IPR008979 Galactose-binding domain-like RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 101 117 8.4E-12 T 11-11-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 254 270 8.4E-12 T 11-11-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 580 595 8.4E-12 T 11-11-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 65 75 8.4E-12 T 11-11-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 SUPERFAMILY SSF53474 45 420 1.55E-76 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9674 e1e632ef65294bd417a4ce38aa7903b9 626 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 79 380 5.2E-70 T 11-11-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RB5066 aa19ea98dfaabab57379e2c63af732b9 463 Pfam PF07586 Protein of unknown function (DUF1552) 52 367 1.6E-105 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB8985 60025e1cf7053b4a787c1e09454ffe12 122 SUPERFAMILY SSF52980 2 116 5.04E-19 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RB8985 60025e1cf7053b4a787c1e09454ffe12 122 Pfam PF04480 Protein of unknown function (DUF559) 9 113 1.6E-37 T 11-11-2016 IPR007569 Domain of unknown function DUF559 RB9606 d3d78b999f86349e21bd55f5b60f034e 613 Pfam PF03983 SLA1 homology domain 1, SHD1 27 82 1.9E-10 T 11-11-2016 IPR007131 SLA1 homology domain 1, SHD1 GO:0008092|GO:0030674|GO:0042802|GO:0043130 RB9606 d3d78b999f86349e21bd55f5b60f034e 613 SUPERFAMILY SSF50998 196 415 1.41E-15 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9606 d3d78b999f86349e21bd55f5b60f034e 613 Gene3D G3DSA:2.130.10.10 189 431 1.1E-7 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 223 590 1.3E-75 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 Pfam PF03572 Peptidase family S41 384 568 2.2E-48 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 265 343 1.2E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 SUPERFAMILY SSF50156 243 363 2.1E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 Gene3D G3DSA:2.30.42.10 270 358 1.1E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 SMART SM00245 349 570 2.5E-49 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 Gene3D G3DSA:3.90.226.10 359 588 9.5E-52 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 SMART SM00228 269 347 4.6E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 578 676 3.2E-16 T 11-11-2016 IPR020992 Tail specific protease, C-terminal RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 SUPERFAMILY SSF52096 375 574 1.59E-59 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB12148 d0fd1186e5e38bb25b0bdb106649acad 708 SUPERFAMILY SSF52096 218 287 1.59E-59 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 Pfam PF00873 AcrB/AcrD/AcrF family 748 1103 2.0E-60 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 Pfam PF00873 AcrB/AcrD/AcrF family 8 636 4.2E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 5.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 PRINTS PR00702 Acriflavin resistance protein family signature 485 508 5.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 5.5E-18 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 Gene3D G3DSA:3.30.2090.10 779 862 1.4E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 Gene3D G3DSA:1.10.3850.10 869 1104 2.3E-51 T 11-11-2016 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 SUPERFAMILY SSF82693 40 134 1.52E-19 T 11-11-2016 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 SUPERFAMILY SSF82866 862 1104 3.4E-41 T 11-11-2016 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 Gene3D G3DSA:3.30.70.1430 40 139 5.8E-23 T 11-11-2016 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 SUPERFAMILY SSF82866 313 511 9.94E-32 T 11-11-2016 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 SUPERFAMILY SSF82714 779 863 1.7E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 Gene3D G3DSA:1.20.1640.10 304 518 3.1E-39 T 11-11-2016 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 SUPERFAMILY SSF82693 287 346 3.14E-13 T 11-11-2016 RB10984 c82d7d888005f51fe8d33fbbf83ce2a6 1115 SUPERFAMILY SSF82693 156 192 3.14E-13 T 11-11-2016 RB6285 78f0c71be043a5a1e30f8941fac76373 448 Gene3D G3DSA:3.40.50.720 235 310 6.3E-12 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6285 78f0c71be043a5a1e30f8941fac76373 448 Gene3D G3DSA:3.40.50.1480 8 234 6.5E-126 T 11-11-2016 RB6285 78f0c71be043a5a1e30f8941fac76373 448 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 218 234 - T 11-11-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 SUPERFAMILY SSF51735 196 366 3.56E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6285 78f0c71be043a5a1e30f8941fac76373 448 PIRSF PIRSF001109 1 448 5.1E-191 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 440 6.2E-193 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 11-11-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 11 146 5.3E-73 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 147 447 1.0E-58 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 SUPERFAMILY SSF52283 9 195 1.59E-118 T 11-11-2016 RB6285 78f0c71be043a5a1e30f8941fac76373 448 SUPERFAMILY SSF52283 367 448 1.59E-118 T 11-11-2016 RB6285 78f0c71be043a5a1e30f8941fac76373 448 SMART SM00996 10 447 8.7E-302 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 SMART SM00997 196 366 1.9E-100 T 11-11-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 196 366 3.3E-76 T 11-11-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB6285 78f0c71be043a5a1e30f8941fac76373 448 Gene3D G3DSA:3.40.50.1480 367 448 2.9E-35 T 11-11-2016 RB6285 78f0c71be043a5a1e30f8941fac76373 448 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 440 48.656 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RB2718 ece3979800456d0ad88ce418280bf040 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 335 9.1E-69 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 SUPERFAMILY SSF55424 351 472 1.03E-42 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 1.0E-36 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 300 322 1.0E-36 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.0E-36 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-36 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.0E-36 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 472 8.5E-161 T 11-11-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RB2718 ece3979800456d0ad88ce418280bf040 474 Gene3D G3DSA:3.50.50.60 148 341 8.4E-57 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 SUPERFAMILY SSF51905 1 57 3.11E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 SUPERFAMILY SSF51905 228 373 3.11E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 SUPERFAMILY SSF51905 103 199 3.11E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 315 322 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 2.8E-76 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 PIRSF PIRSF000350 1 471 1.0E-91 T 11-11-2016 RB2718 ece3979800456d0ad88ce418280bf040 474 Gene3D G3DSA:3.50.50.60 7 147 1.5E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 463 4.4E-38 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB2718 ece3979800456d0ad88ce418280bf040 474 Gene3D G3DSA:3.30.390.30 342 472 1.8E-47 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB8161 0653f79fa22c3a7b41128283cfb8d5e8 256 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 9 248 1.7E-31 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB8161 0653f79fa22c3a7b41128283cfb8d5e8 256 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 255 6.2E-98 T 11-11-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RB8161 0653f79fa22c3a7b41128283cfb8d5e8 256 Gene3D G3DSA:3.60.10.10 3 255 2.5E-98 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB8161 0653f79fa22c3a7b41128283cfb8d5e8 256 SUPERFAMILY SSF56219 5 255 1.7E-78 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB8161 0653f79fa22c3a7b41128283cfb8d5e8 256 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 5 255 2.7E-94 T 11-11-2016 RB8161 0653f79fa22c3a7b41128283cfb8d5e8 256 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 191 206 - T 11-11-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 RB8161 0653f79fa22c3a7b41128283cfb8d5e8 256 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 32 41 - T 11-11-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RB11978 d0bf926715b0e99272e4ed669430e47f 881 SUPERFAMILY SSF53474 52 304 1.26E-35 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11978 d0bf926715b0e99272e4ed669430e47f 881 Gene3D G3DSA:2.120.10.30 607 877 7.0E-35 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB11978 d0bf926715b0e99272e4ed669430e47f 881 Gene3D G3DSA:3.40.50.1820 51 305 2.5E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11978 d0bf926715b0e99272e4ed669430e47f 881 Gene3D G3DSA:3.40.50.1820 326 585 3.1E-48 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11978 d0bf926715b0e99272e4ed669430e47f 881 Pfam PF00756 Putative esterase 72 300 2.6E-16 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 RB11978 d0bf926715b0e99272e4ed669430e47f 881 Pfam PF00756 Putative esterase 355 495 1.5E-14 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 RB11978 d0bf926715b0e99272e4ed669430e47f 881 SUPERFAMILY SSF63829 605 879 5.1E-40 T 11-11-2016 RB11978 d0bf926715b0e99272e4ed669430e47f 881 SUPERFAMILY SSF53474 329 584 1.2E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11978 d0bf926715b0e99272e4ed669430e47f 881 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 624 868 3.4E-25 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1920 2006 5.5E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Pfam PF07595 Planctomycete extracellular 37 59 3.3E-5 T 11-11-2016 IPR011506 Planctomycete extracellular RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 710 810 0.0037 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 1212 1312 0.067 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 1513 1612 0.073 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 1313 1412 0.15 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 412 512 0.039 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 1713 1812 0.016 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 1613 1712 0.0026 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 1413 1512 0.089 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 1011 1110 0.034 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 513 612 0.19 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00736 819 910 0.055 T 11-11-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1421 1513 3.6E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 418 509 6.9E-10 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 520 613 2.2E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 919 1011 6.4E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1720 1812 4.0E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1520 1613 1.0E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 718 811 1.5E-9 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1220 1312 9.8E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1319 1406 7.59E-11 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1221 1305 1.31E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 418 506 1.44E-10 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1421 1507 3.01E-11 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 920 1004 1.13E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1117 1203 3.93E-10 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1720 1807 1.16E-11 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 520 607 4.71E-10 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 718 803 6.67E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1820 1906 3.27E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1435 1513 1.3E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1133 1211 0.048 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 535 613 1.3E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1335 1413 3.9E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1033 1111 9.2E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 733 811 6.0E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1735 1813 1.5E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 435 513 0.015 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 833 911 0.008 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1835 1913 1.6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 635 711 0.29 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1535 1613 2.6E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 933 1011 9.0E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1235 1313 2.3E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SMART SM00112 1635 1713 1.4E-4 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Pfam PF00028 Cadherin domain 1621 1706 7.3E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Pfam PF00028 Cadherin domain 419 506 1.1E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Pfam PF00028 Cadherin domain 1019 1104 4.7E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Pfam PF00028 Cadherin domain 1520 1605 7.2E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 PRINTS PR00205 Cadherin signature 413 442 5.0E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 PRINTS PR00205 Cadherin signature 682 694 5.0E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 PRINTS PR00205 Cadherin signature 992 1011 5.0E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 PRINTS PR00205 Cadherin signature 1694 1707 5.0E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 PRINTS PR00205 Cadherin signature 1765 1791 5.0E-12 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1520 1607 6.41E-12 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1017 1105 4.84E-11 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 1619 1706 1.57E-10 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1920 2005 3.0E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1822 1906 1.7E-4 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 621 696 3.8E-8 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1621 1706 4.0E-10 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 819 904 3.5E-9 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1018 1104 4.2E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1117 1204 1.1E-10 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 1319 1405 3.1E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 Gene3D G3DSA:2.60.40.60 621 700 1.1E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB886 fd5baeb80f305dde86b70d75cf8a2afd 2009 SUPERFAMILY SSF49313 818 904 8.64E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 SUPERFAMILY SSF52833 4 106 1.2E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 Pfam PF00085 Thioredoxin 6 105 1.4E-33 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 PIRSF PIRSF000077 3 108 5.3E-40 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 106 1.4E-37 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 PRINTS PR00421 Thioredoxin family signature 72 83 5.4E-10 T 11-11-2016 RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 PRINTS PR00421 Thioredoxin family signature 33 42 5.4E-10 T 11-11-2016 RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 PRINTS PR00421 Thioredoxin family signature 25 33 5.4E-10 T 11-11-2016 RB12160 1fb03221aeb93bdfbe2e1aa9d4b004e3 108 Gene3D G3DSA:3.40.30.10 3 106 5.2E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 322 756 9.0E-158 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 Pfam PF01336 OB-fold nucleic acid binding domain 1025 1109 2.5E-10 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 SUPERFAMILY SSF89550 24 289 4.12E-36 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 24 1067 0.0 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 Pfam PF14579 Helix-hairpin-helix motif 835 923 1.3E-25 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 Pfam PF02811 PHP domain 26 203 8.0E-51 T 11-11-2016 IPR004013 PHP domain GO:0003824 RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 Gene3D G3DSA:1.10.150.280 859 895 4.9E-4 T 11-11-2016 RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 Gene3D G3DSA:3.20.20.140 24 282 3.9E-47 T 11-11-2016 RB3103 fee9ce88b338fbe367a8c4393aa729ce 1199 SMART SM00481 25 92 6.2E-33 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 ProSitePatterns PS00018 EF-hand calcium-binding domain. 525 537 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 ProSitePatterns PS00018 EF-hand calcium-binding domain. 553 565 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 Pfam PF00413 Matrixin 51 202 8.0E-35 T 11-11-2016 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 Pfam PF00404 Dockerin type I repeat 335 355 1.8E-7 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 Pfam PF00404 Dockerin type I repeat 298 318 1.4E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 Gene3D G3DSA:1.10.238.10 524 594 2.1E-7 T 11-11-2016 IPR011992 EF-hand domain pair RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 SUPERFAMILY SSF47473 496 593 1.9E-10 T 11-11-2016 IPR011992 EF-hand domain pair RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 SMART SM00235 38 203 9.1E-20 T 11-11-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 Pfam PF07595 Planctomycete extracellular 15 36 5.7E-6 T 11-11-2016 IPR011506 Planctomycete extracellular RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 Gene3D G3DSA:3.40.390.10 12 204 8.5E-40 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 PRINTS PR00138 Matrixin signature 189 202 1.3E-11 T 11-11-2016 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 PRINTS PR00138 Matrixin signature 72 87 1.3E-11 T 11-11-2016 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 PRINTS PR00138 Matrixin signature 155 180 1.3E-11 T 11-11-2016 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 SUPERFAMILY SSF63446 297 355 4.94E-6 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB11133 03bfa3fa86732aed366c29ec6d49acb8 635 SUPERFAMILY SSF55486 43 201 1.37E-33 T 11-11-2016 RB5858 1c6bf37de7886bb8b1c38f96527e8d0d 233 SUPERFAMILY SSF47413 50 120 1.75E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB5858 1c6bf37de7886bb8b1c38f96527e8d0d 233 Pfam PF07883 Cupin domain 160 228 1.8E-15 T 11-11-2016 IPR013096 Cupin 2, conserved barrel RB5858 1c6bf37de7886bb8b1c38f96527e8d0d 233 Gene3D G3DSA:2.60.120.10 156 227 1.5E-20 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB5858 1c6bf37de7886bb8b1c38f96527e8d0d 233 Pfam PF13560 Helix-turn-helix domain 54 111 2.1E-14 T 11-11-2016 RB5858 1c6bf37de7886bb8b1c38f96527e8d0d 233 SMART SM00530 58 113 2.9E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB5858 1c6bf37de7886bb8b1c38f96527e8d0d 233 Gene3D G3DSA:1.10.260.40 55 155 1.7E-21 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB5858 1c6bf37de7886bb8b1c38f96527e8d0d 233 SUPERFAMILY SSF51182 106 228 2.55E-28 T 11-11-2016 IPR011051 RmlC-like cupin domain RB7115 c0fe1cb91d579646a062d528ab16644e 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 29 71 3.0E-8 T 11-11-2016 RB7115 c0fe1cb91d579646a062d528ab16644e 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 53 69 - T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7115 c0fe1cb91d579646a062d528ab16644e 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 1 114 26.486 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7115 c0fe1cb91d579646a062d528ab16644e 118 Gene3D G3DSA:1.10.1900.20 54 116 5.1E-29 T 11-11-2016 RB7115 c0fe1cb91d579646a062d528ab16644e 118 PRINTS PR00062 Ribosomal protein L20 signature 74 100 8.0E-32 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7115 c0fe1cb91d579646a062d528ab16644e 118 PRINTS PR00062 Ribosomal protein L20 signature 41 70 8.0E-32 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7115 c0fe1cb91d579646a062d528ab16644e 118 PRINTS PR00062 Ribosomal protein L20 signature 11 40 8.0E-32 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7115 c0fe1cb91d579646a062d528ab16644e 118 SUPERFAMILY SSF74731 1 116 4.45E-41 T 11-11-2016 RB7115 c0fe1cb91d579646a062d528ab16644e 118 Pfam PF00453 Ribosomal protein L20 2 107 1.2E-39 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7115 c0fe1cb91d579646a062d528ab16644e 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 3.6E-41 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 711 815 6.28E-20 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF69318 1629 1748 9.29E-9 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 485 580 9.81E-19 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF05738 Cna protein B-type domain 528 576 3.8E-8 T 11-11-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF05738 Cna protein B-type domain 977 1023 6.5E-11 T 11-11-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF05738 Cna protein B-type domain 407 452 2.2E-9 T 11-11-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF05738 Cna protein B-type domain 644 690 2.8E-14 T 11-11-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF05738 Cna protein B-type domain 866 912 3.6E-13 T 11-11-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF05738 Cna protein B-type domain 284 333 8.3E-7 T 11-11-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF05738 Cna protein B-type domain 755 801 4.8E-11 T 11-11-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 361 450 1.96E-13 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 1051 1136 2.22E-19 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 944 1039 7.32E-19 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF07595 Planctomycete extracellular 19 41 4.8E-6 T 11-11-2016 IPR011506 Planctomycete extracellular RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF69318 1501 1574 8.37E-5 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 600 695 1.2E-20 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 254 344 2.48E-17 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 1157 1274 6.28E-6 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 741 800 2.2E-13 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 265 329 7.6E-12 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 852 911 1.0E-13 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 1070 1134 5.1E-18 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 396 450 1.8E-11 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 961 1027 2.9E-14 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 630 689 4.0E-15 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 1204 1275 1.3E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Gene3D G3DSA:2.60.40.10 511 571 1.7E-13 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9330 f9b0084f5c545f76bad718620170d3b6 1756 SUPERFAMILY SSF117074 833 928 2.62E-17 T 11-11-2016 RB9330 f9b0084f5c545f76bad718620170d3b6 1756 Pfam PF13620 Carboxypeptidase regulatory-like domain 1077 1129 2.7E-10 T 11-11-2016 RB2860 f585225ca7ee947c45feac40a3a90fbf 719 Gene3D G3DSA:3.30.420.40 200 320 3.4E-19 T 11-11-2016 RB2860 f585225ca7ee947c45feac40a3a90fbf 719 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 7 356 6.3E-41 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM RB2860 f585225ca7ee947c45feac40a3a90fbf 719 Pfam PF11104 Type IV pilus assembly protein PilM; 9 356 1.3E-29 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM RB2860 f585225ca7ee947c45feac40a3a90fbf 719 SUPERFAMILY SSF53067 199 356 6.22E-13 T 11-11-2016 RB2860 f585225ca7ee947c45feac40a3a90fbf 719 SUPERFAMILY SSF53067 57 165 4.14E-5 T 11-11-2016 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 539 551 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 SUPERFAMILY SSF56112 415 681 1.35E-66 T 11-11-2016 IPR011009 Protein kinase-like domain RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 Pfam PF00069 Protein kinase domain 420 677 5.5E-46 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 Gene3D G3DSA:3.30.450.20 205 286 2.1E-4 T 11-11-2016 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 Gene3D G3DSA:3.30.450.20 325 372 2.1E-4 T 11-11-2016 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 Pfam PF02743 Cache domain 68 285 1.9E-14 T 11-11-2016 IPR033479 Double Cache domain 1 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 SMART SM00220 420 689 1.3E-57 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 426 449 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 Gene3D G3DSA:1.10.510.10 517 743 2.3E-43 T 11-11-2016 RB7058 995ec95f63aaa9ed20d1ed1b1e14a3c9 746 Gene3D G3DSA:3.30.200.20 408 516 4.6E-24 T 11-11-2016 RB12606 bd2eab7fdde943c9b7a3cb560243d7df 428 Pfam PF02397 Bacterial sugar transferase 235 420 6.8E-52 T 11-11-2016 IPR003362 Bacterial sugar transferase RB1311 5a281b317405922672f66a73a22290cc 556 Pfam PF16962 Putative ABC exporter 18 551 6.5E-116 T 11-11-2016 IPR031584 Putative ABC exporter RB8487 dcfd73ae20d1646167f1608174212a82 391 Pfam PF04972 BON domain 161 231 1.1E-14 T 11-11-2016 IPR007055 BON domain RB8487 dcfd73ae20d1646167f1608174212a82 391 Pfam PF04972 BON domain 25 94 3.6E-14 T 11-11-2016 IPR007055 BON domain RB661 0caf800d8a492d379cbe062c95353acd 300 Pfam PF12787 EcsC protein family 24 270 1.7E-48 T 11-11-2016 IPR024787 EcsC protein RB971 a295012288257a7c26548d55f034221e 436 SUPERFAMILY SSF52151 34 296 1.49E-33 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB971 a295012288257a7c26548d55f034221e 436 Gene3D G3DSA:3.40.1090.10 41 123 1.8E-16 T 11-11-2016 RB971 a295012288257a7c26548d55f034221e 436 Gene3D G3DSA:3.40.1090.10 237 290 2.5E-4 T 11-11-2016 RB971 a295012288257a7c26548d55f034221e 436 Pfam PF01734 Patatin-like phospholipase 50 267 2.4E-15 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RB6147 e2bcce0f2f8f9a3039259b5085b12e45 394 Gene3D G3DSA:1.20.1090.10 198 382 8.3E-35 T 11-11-2016 RB6147 e2bcce0f2f8f9a3039259b5085b12e45 394 Pfam PF01761 3-dehydroquinate synthase 91 345 3.4E-75 T 11-11-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RB6147 e2bcce0f2f8f9a3039259b5085b12e45 394 Gene3D G3DSA:3.40.50.1970 52 197 1.9E-38 T 11-11-2016 RB6147 e2bcce0f2f8f9a3039259b5085b12e45 394 SUPERFAMILY SSF56796 51 383 1.44E-69 T 11-11-2016 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 PRINTS PR00169 Potassium channel signature 111 131 8.3E-30 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 PRINTS PR00169 Potassium channel signature 177 200 8.3E-30 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 PRINTS PR00169 Potassium channel signature 148 174 8.3E-30 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 PRINTS PR00169 Potassium channel signature 241 267 8.3E-30 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 PRINTS PR00169 Potassium channel signature 32 60 8.3E-30 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 PRINTS PR00169 Potassium channel signature 85 108 8.3E-30 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 PRINTS PR00169 Potassium channel signature 212 234 8.3E-30 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 Gene3D G3DSA:1.10.287.70 41 267 8.5E-49 T 11-11-2016 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 Pfam PF00520 Ion transport protein 41 255 3.0E-29 T 11-11-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 RB12424 a9d872f11cebbc7db3b5a4b25919dc3f 317 SUPERFAMILY SSF81324 36 267 3.43E-50 T 11-11-2016 RB11509 89381e26ff426da8760f8416622aa067 111 SUPERFAMILY SSF159888 3 110 2.22E-13 T 11-11-2016 RB11509 89381e26ff426da8760f8416622aa067 111 Pfam PF08818 Domain of unknown function (DU1801) 13 109 1.3E-15 T 11-11-2016 IPR014922 Domain of unknown function DUF1801 RB1508 d043b699e674941867344cd0f4fda2f8 202 SUPERFAMILY SSF55729 29 193 2.86E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB1508 d043b699e674941867344cd0f4fda2f8 202 Pfam PF00583 Acetyltransferase (GNAT) family 118 188 2.0E-14 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB1508 d043b699e674941867344cd0f4fda2f8 202 Gene3D G3DSA:3.40.630.30 119 192 6.2E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB1508 d043b699e674941867344cd0f4fda2f8 202 Gene3D G3DSA:3.40.630.30 19 56 6.2E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10652 a028311d99a7c6245c217dbb43fae410 341 Gene3D G3DSA:1.10.10.10 13 89 1.4E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10652 a028311d99a7c6245c217dbb43fae410 341 Gene3D G3DSA:3.40.50.150 167 325 1.4E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10652 a028311d99a7c6245c217dbb43fae410 341 SUPERFAMILY SSF46785 6 87 4.04E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10652 a028311d99a7c6245c217dbb43fae410 341 SUPERFAMILY SSF53335 166 326 4.87E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10652 a028311d99a7c6245c217dbb43fae410 341 Pfam PF00891 O-methyltransferase 170 323 5.1E-14 T 11-11-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 RB12144 81c81399e5c9298f8ff67ab6c1286f1c 103 Pfam PF07628 Protein of unknown function (DUF1589) 43 97 2.0E-4 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB10089 37154e915ce411905709e770ece1e9b0 272 Gene3D G3DSA:3.20.20.150 4 264 3.9E-46 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB10089 37154e915ce411905709e770ece1e9b0 272 Pfam PF01261 Xylose isomerase-like TIM barrel 24 218 1.1E-25 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB10089 37154e915ce411905709e770ece1e9b0 272 SUPERFAMILY SSF51658 2 266 1.66E-47 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB6643 c2996536c3d3e48b9c62b23cbab7cef6 205 Pfam PF08281 Sigma-70, region 4 138 189 5.5E-12 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6643 c2996536c3d3e48b9c62b23cbab7cef6 205 Pfam PF04542 Sigma-70 region 2 40 106 3.1E-13 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6643 c2996536c3d3e48b9c62b23cbab7cef6 205 SUPERFAMILY SSF88659 129 193 2.83E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6643 c2996536c3d3e48b9c62b23cbab7cef6 205 Gene3D G3DSA:1.10.10.10 132 194 5.7E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6643 c2996536c3d3e48b9c62b23cbab7cef6 205 SUPERFAMILY SSF88946 31 118 1.29E-17 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6643 c2996536c3d3e48b9c62b23cbab7cef6 205 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 192 2.4E-27 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6643 c2996536c3d3e48b9c62b23cbab7cef6 205 Gene3D G3DSA:1.10.1740.10 36 129 1.8E-19 T 11-11-2016 RB2848 397cccc2c7bc478e4950e069bbacf3f0 469 Pfam PF07394 Protein of unknown function (DUF1501) 50 468 2.0E-155 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB2848 397cccc2c7bc478e4950e069bbacf3f0 469 SUPERFAMILY SSF53649 286 454 1.11E-21 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2848 397cccc2c7bc478e4950e069bbacf3f0 469 Gene3D G3DSA:3.40.720.10 311 453 1.7E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1507 1a6de9fb778b01e784a22d337cd95bfb 334 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 17 323 27.818 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RB1507 1a6de9fb778b01e784a22d337cd95bfb 334 Pfam PF01715 IPP transferase 59 303 4.3E-72 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RB1507 1a6de9fb778b01e784a22d337cd95bfb 334 Gene3D G3DSA:1.10.287.890 220 300 9.8E-23 T 11-11-2016 RB1507 1a6de9fb778b01e784a22d337cd95bfb 334 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 17 308 2.0E-68 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RB1507 1a6de9fb778b01e784a22d337cd95bfb 334 SUPERFAMILY SSF52540 17 71 2.84E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1507 1a6de9fb778b01e784a22d337cd95bfb 334 SUPERFAMILY SSF52540 166 250 2.84E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1507 1a6de9fb778b01e784a22d337cd95bfb 334 SUPERFAMILY SSF52540 17 168 3.06E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1507 1a6de9fb778b01e784a22d337cd95bfb 334 Gene3D G3DSA:3.40.50.300 16 191 4.9E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7781 7cef46de92f0be46533af99d47015f5e 719 SMART SM00044 502 692 1.7E-28 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB7781 7cef46de92f0be46533af99d47015f5e 719 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 538 700 3.6E-38 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB7781 7cef46de92f0be46533af99d47015f5e 719 SUPERFAMILY SSF55073 534 710 8.32E-55 T 11-11-2016 IPR029787 Nucleotide cyclase RB7781 7cef46de92f0be46533af99d47015f5e 719 Gene3D G3DSA:3.30.70.1230 539 705 6.8E-47 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB7781 7cef46de92f0be46533af99d47015f5e 719 SMART SM01080 103 443 7.6E-11 T 11-11-2016 IPR007890 CHASE2 RB3431 749363308c81b061c4ee425823de94ab 260 SMART SM00464 19 226 8.0E-18 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RB3431 749363308c81b061c4ee425823de94ab 260 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 20 226 8.3E-25 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RB3431 749363308c81b061c4ee425823de94ab 260 SUPERFAMILY SSF88697 22 225 8.2E-38 T 11-11-2016 IPR015947 PUA-like domain RB13157 469a396988aa9e7a88d044230843c2b8 514 Gene3D G3DSA:3.30.1120.10 435 484 2.2E-11 T 11-11-2016 RB13157 469a396988aa9e7a88d044230843c2b8 514 SUPERFAMILY SSF53649 43 475 9.45E-102 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB13157 469a396988aa9e7a88d044230843c2b8 514 Pfam PF00884 Sulfatase 43 372 2.3E-51 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB13157 469a396988aa9e7a88d044230843c2b8 514 Gene3D G3DSA:3.40.720.10 43 232 1.1E-86 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB13157 469a396988aa9e7a88d044230843c2b8 514 Gene3D G3DSA:3.40.720.10 276 434 1.1E-86 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB6095 e3c6d38b5a9f65d972b709a6d7bfa24e 655 Gene3D G3DSA:1.10.2020.10 49 132 8.1E-8 T 11-11-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 RB6095 e3c6d38b5a9f65d972b709a6d7bfa24e 655 SUPERFAMILY SSF51556 17 440 4.59E-105 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB6095 e3c6d38b5a9f65d972b709a6d7bfa24e 655 Pfam PF02614 Glucuronate isomerase 16 409 4.2E-10 T 11-11-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 RB6095 e3c6d38b5a9f65d972b709a6d7bfa24e 655 Gene3D G3DSA:3.20.20.140 12 44 4.7E-51 T 11-11-2016 RB6095 e3c6d38b5a9f65d972b709a6d7bfa24e 655 Gene3D G3DSA:3.20.20.140 133 438 4.7E-51 T 11-11-2016 RB4917 5e48ea31b50a113f465c140dd93b240d 306 PRINTS PR00126 ATP synthase gamma subunit signature 83 102 4.5E-16 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB4917 5e48ea31b50a113f465c140dd93b240d 306 PRINTS PR00126 ATP synthase gamma subunit signature 279 300 4.5E-16 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB4917 5e48ea31b50a113f465c140dd93b240d 306 PRINTS PR00126 ATP synthase gamma subunit signature 248 267 4.5E-16 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB4917 5e48ea31b50a113f465c140dd93b240d 306 TIGRFAM TIGR03323 alt_F1F0_F1_gam: alternate F1F0 ATPase, F1 subunit gamma 7 301 2.8E-133 T 11-11-2016 IPR017709 Alternate F1F0 ATPase, F1 subunit gamma RB4917 5e48ea31b50a113f465c140dd93b240d 306 Pfam PF00231 ATP synthase 4 301 5.3E-57 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB4917 5e48ea31b50a113f465c140dd93b240d 306 SUPERFAMILY SSF52943 3 301 2.22E-55 T 11-11-2016 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 RB4917 5e48ea31b50a113f465c140dd93b240d 306 Gene3D G3DSA:3.40.1380.10 81 202 1.3E-12 T 11-11-2016 RB4917 5e48ea31b50a113f465c140dd93b240d 306 Gene3D G3DSA:1.10.287.80 4 36 9.8E-31 T 11-11-2016 RB4917 5e48ea31b50a113f465c140dd93b240d 306 Gene3D G3DSA:1.10.287.80 235 301 9.8E-31 T 11-11-2016 RB8397 a99bb00a70104045a5e66b9e405fd426 708 Pfam PF04851 Type III restriction enzyme, res subunit 22 145 1.4E-11 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RB8397 a99bb00a70104045a5e66b9e405fd426 708 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 11 660 0.0 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RB8397 a99bb00a70104045a5e66b9e405fd426 708 Hamap MF_00204 UvrABC system protein B [uvrB]. 9 662 42.228 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RB8397 a99bb00a70104045a5e66b9e405fd426 708 Gene3D G3DSA:3.30.2060.10 166 237 7.5E-9 T 11-11-2016 RB8397 a99bb00a70104045a5e66b9e405fd426 708 Pfam PF02151 UvrB/uvrC motif 629 661 4.8E-8 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB8397 a99bb00a70104045a5e66b9e405fd426 708 SUPERFAMILY SSF46600 628 662 3.4E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB8397 a99bb00a70104045a5e66b9e405fd426 708 Gene3D G3DSA:3.40.50.300 283 343 1.7E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8397 a99bb00a70104045a5e66b9e405fd426 708 Gene3D G3DSA:3.40.50.300 393 414 1.7E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8397 a99bb00a70104045a5e66b9e405fd426 708 Gene3D G3DSA:3.40.50.300 12 95 1.7E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8397 a99bb00a70104045a5e66b9e405fd426 708 SUPERFAMILY SSF52540 10 420 3.91E-128 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8397 a99bb00a70104045a5e66b9e405fd426 708 Gene3D G3DSA:3.40.50.300 424 586 7.4E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8397 a99bb00a70104045a5e66b9e405fd426 708 Pfam PF00271 Helicase conserved C-terminal domain 439 550 1.7E-18 T 11-11-2016 IPR001650 Helicase, C-terminal RB8397 a99bb00a70104045a5e66b9e405fd426 708 SMART SM00487 15 431 1.1E-22 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB8397 a99bb00a70104045a5e66b9e405fd426 708 SUPERFAMILY SSF52540 464 578 1.5E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8397 a99bb00a70104045a5e66b9e405fd426 708 SUPERFAMILY SSF52540 43 88 1.5E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8397 a99bb00a70104045a5e66b9e405fd426 708 Gene3D G3DSA:4.10.860.10 629 662 4.8E-13 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB8397 a99bb00a70104045a5e66b9e405fd426 708 Pfam PF12344 Ultra-violet resistance protein B 557 599 1.5E-23 T 11-11-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain RB8397 a99bb00a70104045a5e66b9e405fd426 708 SMART SM00490 465 551 7.5E-19 T 11-11-2016 IPR001650 Helicase, C-terminal RB8459 45055aabe2de2978f745d5c742666a05 55 SUPERFAMILY SSF46911 2 54 2.49E-18 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8459 45055aabe2de2978f745d5c742666a05 55 PRINTS PR00974 Ribosomal protein S18 family signature 10 20 2.4E-11 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8459 45055aabe2de2978f745d5c742666a05 55 PRINTS PR00974 Ribosomal protein S18 family signature 28 42 2.4E-11 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8459 45055aabe2de2978f745d5c742666a05 55 PRINTS PR00974 Ribosomal protein S18 family signature 20 27 2.4E-11 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8459 45055aabe2de2978f745d5c742666a05 55 PRINTS PR00974 Ribosomal protein S18 family signature 42 52 2.4E-11 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8459 45055aabe2de2978f745d5c742666a05 55 TIGRFAM TIGR00165 S18: ribosomal protein bS18 3 53 7.2E-19 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8459 45055aabe2de2978f745d5c742666a05 55 Pfam PF01084 Ribosomal protein S18 2 50 5.2E-20 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8459 45055aabe2de2978f745d5c742666a05 55 Gene3D G3DSA:4.10.640.10 2 54 2.4E-22 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8459 45055aabe2de2978f745d5c742666a05 55 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 3 52 6.0E-23 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7754 bdc9219fb103de31386cf2700f37c80b 121 SUPERFAMILY SSF47413 2 72 1.27E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB7754 bdc9219fb103de31386cf2700f37c80b 121 SMART SM00530 6 65 2.2E-9 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB7754 bdc9219fb103de31386cf2700f37c80b 121 Gene3D G3DSA:1.10.260.40 2 81 1.0E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB7754 bdc9219fb103de31386cf2700f37c80b 121 Pfam PF13560 Helix-turn-helix domain 2 65 1.8E-12 T 11-11-2016 RB6145 4fa6728bde9ea6636fa467394ffa78a9 322 SUPERFAMILY SSF53474 60 317 5.23E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6145 4fa6728bde9ea6636fa467394ffa78a9 322 Gene3D G3DSA:3.40.50.1820 54 318 3.8E-54 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6145 4fa6728bde9ea6636fa467394ffa78a9 322 Pfam PF00756 Putative esterase 81 229 7.4E-17 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 RB4868 bf2e953002166c539c0bd9f84b27ebb9 316 PIRSF PIRSF005963 6 316 9.7E-126 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RB4868 bf2e953002166c539c0bd9f84b27ebb9 316 Gene3D G3DSA:3.20.20.70 55 313 1.3E-61 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB4868 bf2e953002166c539c0bd9f84b27ebb9 316 SMART SM00729 82 290 6.9E-12 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB4868 bf2e953002166c539c0bd9f84b27ebb9 316 Hamap MF_00206 Lipoyl synthase [lipA]. 35 316 119.925 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RB4868 bf2e953002166c539c0bd9f84b27ebb9 316 Pfam PF04055 Radical SAM superfamily 87 249 8.7E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB4868 bf2e953002166c539c0bd9f84b27ebb9 316 SUPERFAMILY SSF102114 56 309 4.84E-59 T 11-11-2016 RB4868 bf2e953002166c539c0bd9f84b27ebb9 316 TIGRFAM TIGR00510 lipA: lipoyl synthase 30 313 9.9E-111 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RB7579 ffdb413e36185599c56fba9661c708fd 485 Gene3D G3DSA:1.10.8.60 318 390 3.7E-28 T 11-11-2016 RB7579 ffdb413e36185599c56fba9661c708fd 485 Gene3D G3DSA:3.40.50.2300 5 139 1.4E-32 T 11-11-2016 RB7579 ffdb413e36185599c56fba9661c708fd 485 SMART SM00448 5 116 7.5E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7579 ffdb413e36185599c56fba9661c708fd 485 SUPERFAMILY SSF46689 358 476 3.33E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB7579 ffdb413e36185599c56fba9661c708fd 485 SUPERFAMILY SSF52172 3 188 1.71E-39 T 11-11-2016 IPR011006 CheY-like superfamily RB7579 ffdb413e36185599c56fba9661c708fd 485 Pfam PF00072 Response regulator receiver domain 7 116 5.2E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7579 ffdb413e36185599c56fba9661c708fd 485 Gene3D G3DSA:3.40.50.300 143 317 5.3E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7579 ffdb413e36185599c56fba9661c708fd 485 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB7579 ffdb413e36185599c56fba9661c708fd 485 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB7579 ffdb413e36185599c56fba9661c708fd 485 SUPERFAMILY SSF52540 146 388 1.25E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7579 ffdb413e36185599c56fba9661c708fd 485 Gene3D G3DSA:1.10.10.60 430 472 3.5E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB7579 ffdb413e36185599c56fba9661c708fd 485 Pfam PF00158 Sigma-54 interaction domain 147 311 6.3E-65 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB7579 ffdb413e36185599c56fba9661c708fd 485 SMART SM00382 165 308 3.8E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7579 ffdb413e36185599c56fba9661c708fd 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 476 3.4E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB7579 ffdb413e36185599c56fba9661c708fd 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 456 3.4E-7 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB7579 ffdb413e36185599c56fba9661c708fd 485 Pfam PF02954 Bacterial regulatory protein, Fis family 437 473 7.3E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 SUPERFAMILY SSF48029 14 124 1.39E-16 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB5642 6ea896f71e056509f8ceec9ed0c71524 349 Pfam PF14841 FliG middle domain 130 204 8.3E-24 T 11-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain RB5642 6ea896f71e056509f8ceec9ed0c71524 349 Pfam PF14842 FliG N-terminal domain 22 121 1.1E-18 T 11-11-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain RB5642 6ea896f71e056509f8ceec9ed0c71524 349 PIRSF PIRSF003161 15 348 5.7E-99 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 Pfam PF01706 FliG C-terminal domain 231 336 4.6E-41 T 11-11-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal RB5642 6ea896f71e056509f8ceec9ed0c71524 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 240 260 1.3E-56 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 209 234 1.3E-56 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 49 75 1.3E-56 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 20 36 1.3E-56 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 128 151 1.3E-56 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 262 282 1.3E-56 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 286 312 1.3E-56 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 23 347 1.1E-94 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 RB5642 6ea896f71e056509f8ceec9ed0c71524 349 Gene3D G3DSA:1.10.220.30 209 345 2.4E-41 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB5642 6ea896f71e056509f8ceec9ed0c71524 349 Gene3D G3DSA:1.10.220.30 120 205 1.1E-23 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB5642 6ea896f71e056509f8ceec9ed0c71524 349 Gene3D G3DSA:1.10.220.30 5 77 1.0E-12 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB5642 6ea896f71e056509f8ceec9ed0c71524 349 SUPERFAMILY SSF48029 128 336 3.79E-62 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB8871 256a493d002a929f437679f4cd38d5f3 251 Gene3D G3DSA:3.40.50.720 4 249 1.6E-77 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8871 256a493d002a929f437679f4cd38d5f3 251 SUPERFAMILY SSF51735 8 250 9.94E-74 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8871 256a493d002a929f437679f4cd38d5f3 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB8871 256a493d002a929f437679f4cd38d5f3 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 194 1.0E-4 T 11-11-2016 RB8871 256a493d002a929f437679f4cd38d5f3 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 1.1E-59 T 11-11-2016 RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.1E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.1E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.1E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB8871 256a493d002a929f437679f4cd38d5f3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11948 8dea9304637e57e7313c0d8d3d8fab51 714 Pfam PF12831 FAD dependent oxidoreductase 35 547 2.6E-137 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11948 8dea9304637e57e7313c0d8d3d8fab51 714 SUPERFAMILY SSF51905 12 207 5.06E-13 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11948 8dea9304637e57e7313c0d8d3d8fab51 714 Gene3D G3DSA:3.50.50.60 31 204 5.0E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5895 df6610084b1b598109a2a9b4c189e805 708 SUPERFAMILY SSF53335 455 638 4.65E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB5895 df6610084b1b598109a2a9b4c189e805 708 Gene3D G3DSA:3.40.50.150 447 697 7.4E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB4461 d096ee862dbbdcb4932a4a890bc0cf58 473 SUPERFAMILY SSF50182 244 310 5.56E-15 T 11-11-2016 IPR010920 LSM domain RB4461 d096ee862dbbdcb4932a4a890bc0cf58 473 SUPERFAMILY SSF82689 313 411 5.89E-17 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RB4461 d096ee862dbbdcb4932a4a890bc0cf58 473 Pfam PF04972 BON domain 67 132 3.1E-10 T 11-11-2016 IPR007055 BON domain RB4461 d096ee862dbbdcb4932a4a890bc0cf58 473 Gene3D G3DSA:3.30.70.100 315 399 1.6E-14 T 11-11-2016 RB4461 d096ee862dbbdcb4932a4a890bc0cf58 473 Gene3D G3DSA:2.30.30.60 260 309 1.3E-15 T 11-11-2016 RB4461 d096ee862dbbdcb4932a4a890bc0cf58 473 Pfam PF00924 Mechanosensitive ion channel 200 401 1.4E-38 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RB1900 b207567deeff630895fe27e7cbbb4bb1 184 Pfam PF00467 KOW motif 133 162 7.4E-6 T 11-11-2016 IPR005824 KOW RB1900 b207567deeff630895fe27e7cbbb4bb1 184 SUPERFAMILY SSF50104 129 183 3.38E-9 T 11-11-2016 IPR008991 Translation protein SH3-like domain RB1900 b207567deeff630895fe27e7cbbb4bb1 184 Gene3D G3DSA:2.30.30.30 127 183 8.4E-8 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 RB1900 b207567deeff630895fe27e7cbbb4bb1 184 SUPERFAMILY SSF82679 25 85 2.22E-9 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RB1900 b207567deeff630895fe27e7cbbb4bb1 184 SMART SM00739 130 157 0.0024 T 11-11-2016 IPR005824 KOW RB1900 b207567deeff630895fe27e7cbbb4bb1 184 Pfam PF02357 Transcription termination factor nusG 26 91 6.1E-7 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RB10537 03df28372968679ca452eae6ef85abcc 329 Gene3D G3DSA:3.30.70.890 200 310 7.9E-20 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain RB10537 03df28372968679ca452eae6ef85abcc 329 SUPERFAMILY SSF55060 199 320 1.15E-20 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain RB10537 03df28372968679ca452eae6ef85abcc 329 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 316 8.2E-43 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RB10537 03df28372968679ca452eae6ef85abcc 329 Pfam PF08544 GHMP kinases C terminal 244 309 2.8E-8 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain RB10537 03df28372968679ca452eae6ef85abcc 329 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 7 319 27.982 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RB10537 03df28372968679ca452eae6ef85abcc 329 Gene3D G3DSA:3.30.230.10 10 195 2.6E-41 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB10537 03df28372968679ca452eae6ef85abcc 329 PIRSF PIRSF010376 5 327 1.2E-87 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RB10537 03df28372968679ca452eae6ef85abcc 329 SUPERFAMILY SSF54211 9 192 1.52E-28 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB336 430e9329b26688a2d4bff0a46ad80485 171 Pfam PF01797 Transposase IS200 like 62 124 1.1E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB336 430e9329b26688a2d4bff0a46ad80485 171 Gene3D G3DSA:3.30.70.1290 59 145 1.3E-5 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB336 430e9329b26688a2d4bff0a46ad80485 171 SUPERFAMILY SSF143422 55 156 1.7E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB8350 10fd9329c4989fa6f017dd5aa1e822c4 481 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 150 481 2.2E-78 T 11-11-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 RB8350 10fd9329c4989fa6f017dd5aa1e822c4 481 SUPERFAMILY SSF56935 193 481 3.48E-9 T 11-11-2016 RB9216 e28789061a29efa1273713af705bf59d 229 Pfam PF13637 Ankyrin repeats (many copies) 177 227 8.7E-10 T 11-11-2016 RB9216 e28789061a29efa1273713af705bf59d 229 SMART SM00248 140 169 2.9E-4 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB9216 e28789061a29efa1273713af705bf59d 229 SMART SM00248 174 203 0.0012 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB9216 e28789061a29efa1273713af705bf59d 229 SMART SM00248 107 136 34.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB9216 e28789061a29efa1273713af705bf59d 229 Gene3D G3DSA:1.25.40.20 75 227 1.5E-41 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB9216 e28789061a29efa1273713af705bf59d 229 SUPERFAMILY SSF48403 80 228 3.73E-39 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB9216 e28789061a29efa1273713af705bf59d 229 Pfam PF12796 Ankyrin repeats (3 copies) 82 169 2.2E-12 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB4527 e9461d6072fb48e525cc024a1392b406 444 Gene3D G3DSA:3.40.47.10 7 285 6.5E-47 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB4527 e9461d6072fb48e525cc024a1392b406 444 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 330 397 3.1E-8 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RB4527 e9461d6072fb48e525cc024a1392b406 444 SUPERFAMILY SSF53901 7 279 3.63E-48 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB4527 e9461d6072fb48e525cc024a1392b406 444 SMART SM00825 Beta-ketoacyl synthase 9 414 5.6E-5 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RB4527 e9461d6072fb48e525cc024a1392b406 444 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 7 274 1.9E-34 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB4527 e9461d6072fb48e525cc024a1392b406 444 Gene3D G3DSA:3.40.47.10 330 420 3.1E-14 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB4527 e9461d6072fb48e525cc024a1392b406 444 SUPERFAMILY SSF53901 242 440 1.34E-30 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB9305 316931b15817f40185ee3d13fba53ede 360 Pfam PF00472 RF-1 domain 214 323 9.7E-40 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RB9305 316931b15817f40185ee3d13fba53ede 360 SMART SM00937 67 181 1.5E-42 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RB9305 316931b15817f40185ee3d13fba53ede 360 SUPERFAMILY SSF75620 14 352 1.02E-118 T 11-11-2016 RB9305 316931b15817f40185ee3d13fba53ede 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 8 353 3.9E-135 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RB9305 316931b15817f40185ee3d13fba53ede 360 Pfam PF03462 PCRF domain 14 206 2.6E-60 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RB9305 316931b15817f40185ee3d13fba53ede 360 Gene3D G3DSA:3.30.160.20 213 291 1.4E-32 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain RB9305 316931b15817f40185ee3d13fba53ede 360 Gene3D G3DSA:1.20.58.410 9 93 4.1E-14 T 11-11-2016 RB9305 316931b15817f40185ee3d13fba53ede 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 35.625 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 SUPERFAMILY SSF69318 543 948 5.75E-50 T 11-11-2016 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 SUPERFAMILY SSF48452 271 459 2.48E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Pfam PF13432 Tetratricopeptide repeat 101 154 0.0049 T 11-11-2016 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 795 860 1.6E-9 T 11-11-2016 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 612 669 5.4E-11 T 11-11-2016 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Gene3D G3DSA:1.25.40.10 333 459 2.5E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Gene3D G3DSA:1.25.40.10 267 298 2.5E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Gene3D G3DSA:1.25.40.10 89 212 2.5E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Pfam PF07593 ASPIC and UnbV 969 1032 5.0E-13 T 11-11-2016 IPR011519 ASPIC/UnbV RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Pfam PF14559 Tetratricopeptide repeat 347 392 3.2E-6 T 11-11-2016 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 SUPERFAMILY SSF48452 109 229 8.01E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 SUPERFAMILY SSF48452 331 392 8.01E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Gene3D G3DSA:2.130.10.130 524 672 1.5E-11 T 11-11-2016 RB10583 c6b59bdcb2768aeb767ed544d2608e74 1058 Gene3D G3DSA:2.130.10.130 711 947 2.6E-17 T 11-11-2016 RB4069 95b05373b90102e266d584f7e9993d7a 359 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 45 56 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB4069 95b05373b90102e266d584f7e9993d7a 359 Pfam PF06463 Molybdenum Cofactor Synthesis C 212 341 1.7E-33 T 11-11-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB4069 95b05373b90102e266d584f7e9993d7a 359 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 30 359 2.3E-120 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB4069 95b05373b90102e266d584f7e9993d7a 359 Pfam PF04055 Radical SAM superfamily 43 205 5.6E-29 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB4069 95b05373b90102e266d584f7e9993d7a 359 SUPERFAMILY SSF102114 30 307 9.55E-66 T 11-11-2016 RB4069 95b05373b90102e266d584f7e9993d7a 359 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 30 359 38.726 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB4069 95b05373b90102e266d584f7e9993d7a 359 Pfam PF13353 4Fe-4S single cluster domain 46 150 1.2E-6 T 11-11-2016 RB4069 95b05373b90102e266d584f7e9993d7a 359 Gene3D G3DSA:3.20.20.70 28 331 1.9E-72 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB4069 95b05373b90102e266d584f7e9993d7a 359 SMART SM00729 39 244 1.4E-11 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB7502 8f1dd1569231f6385647795ab141d2b9 640 Gene3D G3DSA:3.40.50.410 89 198 2.1E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7502 8f1dd1569231f6385647795ab141d2b9 640 Pfam PF13519 von Willebrand factor type A domain 90 195 1.4E-18 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7502 8f1dd1569231f6385647795ab141d2b9 640 SMART SM00327 87 269 1.1E-14 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7502 8f1dd1569231f6385647795ab141d2b9 640 Pfam PF07584 Aerotolerance regulator N-terminal 1 78 1.1E-14 T 11-11-2016 IPR024163 Aerotolerance regulator, N-terminal RB7502 8f1dd1569231f6385647795ab141d2b9 640 SUPERFAMILY SSF53300 89 205 3.71E-17 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4685 59197c8031ed33f0efc078245839bec1 865 SMART SM00028 327 360 22.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB4685 59197c8031ed33f0efc078245839bec1 865 SMART SM00028 140 173 0.43 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB4685 59197c8031ed33f0efc078245839bec1 865 SUPERFAMILY SSF48452 117 175 3.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4685 59197c8031ed33f0efc078245839bec1 865 SUPERFAMILY SSF48452 329 360 3.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4685 59197c8031ed33f0efc078245839bec1 865 SUPERFAMILY SSF48452 541 603 3.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4685 59197c8031ed33f0efc078245839bec1 865 Gene3D G3DSA:1.25.40.10 329 360 8.8E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4685 59197c8031ed33f0efc078245839bec1 865 Gene3D G3DSA:1.25.40.10 117 231 8.8E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4685 59197c8031ed33f0efc078245839bec1 865 Gene3D G3DSA:1.25.40.10 541 627 8.8E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4685 59197c8031ed33f0efc078245839bec1 865 Gene3D G3DSA:1.25.40.10 763 779 8.8E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4995 ed836dfb534ffffe33a91639c57ca12b 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 149 5.6E-37 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB4995 ed836dfb534ffffe33a91639c57ca12b 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 1.8E-44 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB4995 ed836dfb534ffffe33a91639c57ca12b 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 23.455 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB4995 ed836dfb534ffffe33a91639c57ca12b 155 Gene3D G3DSA:3.40.50.960 12 154 6.2E-46 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB4995 ed836dfb534ffffe33a91639c57ca12b 155 SUPERFAMILY SSF52121 10 154 6.15E-45 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB374 b0d08dae2731cc668bf8c50e2e9b6ecd 281 SMART SM00382 33 215 8.8E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB374 b0d08dae2731cc668bf8c50e2e9b6ecd 281 SUPERFAMILY SSF52540 7 225 4.31E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB374 b0d08dae2731cc668bf8c50e2e9b6ecd 281 Gene3D G3DSA:3.40.50.300 6 215 5.2E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB374 b0d08dae2731cc668bf8c50e2e9b6ecd 281 Pfam PF00005 ABC transporter 26 165 5.0E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB374 b0d08dae2731cc668bf8c50e2e9b6ecd 281 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB374 b0d08dae2731cc668bf8c50e2e9b6ecd 281 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 253 2.0E-95 T 11-11-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 RB12285 a841eb5d10473c1bc3d3ccd3b8eb6fe5 224 SUPERFAMILY SSF53335 40 182 2.21E-17 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12285 a841eb5d10473c1bc3d3ccd3b8eb6fe5 224 Gene3D G3DSA:3.40.50.150 51 173 2.3E-12 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12285 a841eb5d10473c1bc3d3ccd3b8eb6fe5 224 Pfam PF00398 Ribosomal RNA adenine dimethylase 56 114 3.7E-5 T 11-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RB12250 b9be45eda7f593fbc3659180d24c681c 104 Pfam PF10985 Protein of unknown function (DUF2805) 27 96 2.4E-31 T 11-11-2016 IPR019882 Conserved hypothetical protein CHP03643 RB12250 b9be45eda7f593fbc3659180d24c681c 104 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 25 95 8.6E-34 T 11-11-2016 IPR019882 Conserved hypothetical protein CHP03643 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Gene3D G3DSA:2.60.120.260 617 756 2.6E-15 T 11-11-2016 IPR008979 Galactose-binding domain-like RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 SUPERFAMILY SSF55545 72 200 8.37E-20 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 538 598 3.3E-13 T 11-11-2016 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 75 198 2.6E-14 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 SUPERFAMILY SSF51445 202 511 2.98E-66 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Gene3D G3DSA:2.60.40.320 561 602 9.5E-6 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 346 499 4.0E-12 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 202 341 1.7E-22 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 195 212 6.9E-17 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 481 498 6.9E-17 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 271 288 6.9E-17 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 161 181 6.9E-17 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 SUPERFAMILY SSF49785 618 756 1.19E-12 T 11-11-2016 IPR008979 Galactose-binding domain-like RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Pfam PF00754 F5/8 type C domain 628 739 1.0E-8 T 11-11-2016 IPR000421 Coagulation factor 5/8 C-terminal domain RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Gene3D G3DSA:3.30.379.10 56 187 1.1E-18 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 RB4561 e8ab5ff43838bbb46699ca069f8cb109 756 Gene3D G3DSA:3.20.20.80 188 516 5.7E-67 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB13104 5300602e7065c25c17723cc864be8633 704 PRINTS PR00811 Bacterial general secretion pathway protein D signature 535 553 3.4E-7 T 11-11-2016 IPR001775 GspD/PilQ family RB13104 5300602e7065c25c17723cc864be8633 704 PRINTS PR00811 Bacterial general secretion pathway protein D signature 336 346 3.4E-7 T 11-11-2016 IPR001775 GspD/PilQ family RB13104 5300602e7065c25c17723cc864be8633 704 PRINTS PR00811 Bacterial general secretion pathway protein D signature 398 422 3.4E-7 T 11-11-2016 IPR001775 GspD/PilQ family RB13104 5300602e7065c25c17723cc864be8633 704 PRINTS PR00811 Bacterial general secretion pathway protein D signature 558 572 3.4E-7 T 11-11-2016 IPR001775 GspD/PilQ family RB13104 5300602e7065c25c17723cc864be8633 704 Pfam PF13629 Pilus formation protein N terminal region 141 216 5.7E-11 T 11-11-2016 IPR032789 Pilus formation protein, N-terminal RB13104 5300602e7065c25c17723cc864be8633 704 Pfam PF00263 Bacterial type II and III secretion system protein 403 570 4.2E-37 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 SUPERFAMILY SSF57938 137 214 2.88E-18 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 7 352 9.8E-125 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Pfam PF00226 DnaJ domain 7 68 5.4E-24 T 11-11-2016 IPR001623 DnaJ domain RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 SMART SM00271 5 63 6.7E-26 T 11-11-2016 IPR001623 DnaJ domain RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 SUPERFAMILY SSF49493 262 347 1.02E-22 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 PRINTS PR00625 DnaJ domain signature 43 63 2.0E-26 T 11-11-2016 IPR001623 DnaJ domain RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 PRINTS PR00625 DnaJ domain signature 8 26 2.0E-26 T 11-11-2016 IPR001623 DnaJ domain RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 PRINTS PR00625 DnaJ domain signature 26 41 2.0E-26 T 11-11-2016 IPR001623 DnaJ domain RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 PRINTS PR00625 DnaJ domain signature 63 82 2.0E-26 T 11-11-2016 IPR001623 DnaJ domain RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 372 38.123 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Pfam PF01556 DnaJ C terminal domain 124 336 2.6E-38 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 11-11-2016 IPR018253 DnaJ domain, conserved site RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Gene3D G3DSA:1.10.287.110 3 92 2.9E-32 T 11-11-2016 IPR001623 DnaJ domain RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Pfam PF00684 DnaJ central domain 150 210 1.2E-10 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 SUPERFAMILY SSF46565 2 109 2.09E-31 T 11-11-2016 IPR001623 DnaJ domain RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Gene3D G3DSA:2.10.230.10 147 214 1.0E-18 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 SUPERFAMILY SSF49493 217 259 3.27E-19 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 SUPERFAMILY SSF49493 116 158 3.27E-19 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Gene3D G3DSA:2.60.260.20 216 257 3.8E-20 T 11-11-2016 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Gene3D G3DSA:2.60.260.20 259 337 2.8E-20 T 11-11-2016 RB8972 88a71279c2bf3068bb7a1d324567ed0e 391 Gene3D G3DSA:2.60.260.20 117 146 3.8E-20 T 11-11-2016 RB7546 9505d84d96432e6bf938ab958ed6f206 294 Gene3D G3DSA:3.20.20.220 7 291 1.5E-100 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like RB7546 9505d84d96432e6bf938ab958ed6f206 294 Pfam PF02219 Methylenetetrahydrofolate reductase 12 288 1.2E-91 T 11-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RB7546 9505d84d96432e6bf938ab958ed6f206 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 18 288 7.4E-106 T 11-11-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 RB7546 9505d84d96432e6bf938ab958ed6f206 294 SUPERFAMILY SSF51730 5 290 5.3E-89 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like RB7514 61c16454b428595f96f4fc6984fbbd61 302 Gene3D G3DSA:3.40.50.10490 5 251 1.9E-87 T 11-11-2016 RB7514 61c16454b428595f96f4fc6984fbbd61 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 296 8.2E-118 T 11-11-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 RB7514 61c16454b428595f96f4fc6984fbbd61 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 41.796 T 11-11-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 RB7514 61c16454b428595f96f4fc6984fbbd61 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 11-11-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 RB7514 61c16454b428595f96f4fc6984fbbd61 302 Pfam PF13580 SIS domain 34 167 8.5E-12 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 RB7514 61c16454b428595f96f4fc6984fbbd61 302 SUPERFAMILY SSF53697 7 250 1.4E-68 T 11-11-2016 RB11366 f6c700b8f33c0d82a748e91e4ad05112 182 SUPERFAMILY SSF47413 70 133 9.57E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB11366 f6c700b8f33c0d82a748e91e4ad05112 182 Pfam PF01381 Helix-turn-helix 75 130 1.4E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB11366 f6c700b8f33c0d82a748e91e4ad05112 182 SMART SM00530 74 130 1.7E-11 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB11366 f6c700b8f33c0d82a748e91e4ad05112 182 Gene3D G3DSA:1.10.260.40 71 179 1.1E-18 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB6226 568bc5219e46bce1704540b7b650a1fc 381 Gene3D G3DSA:3.30.70.20 185 254 3.3E-8 T 11-11-2016 RB6226 568bc5219e46bce1704540b7b650a1fc 381 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 8 353 6.7E-96 T 11-11-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 RB6226 568bc5219e46bce1704540b7b650a1fc 381 Gene3D G3DSA:1.25.10.10 313 364 2.6E-7 T 11-11-2016 IPR011989 Armadillo-like helical RB6226 568bc5219e46bce1704540b7b650a1fc 381 Pfam PF13646 HEAT repeats 314 375 1.9E-9 T 11-11-2016 RB6226 568bc5219e46bce1704540b7b650a1fc 381 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 2.6E-18 T 11-11-2016 RB6226 568bc5219e46bce1704540b7b650a1fc 381 SUPERFAMILY SSF48371 311 373 6.17E-9 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB6226 568bc5219e46bce1704540b7b650a1fc 381 Pfam PF08331 Domain of unknown function (DUF1730) 58 135 1.5E-17 T 11-11-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 RB6226 568bc5219e46bce1704540b7b650a1fc 381 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB6226 568bc5219e46bce1704540b7b650a1fc 381 SUPERFAMILY SSF46548 134 254 8.89E-15 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RB12363 a912910b683f508d065de03a3abfd701 787 Gene3D G3DSA:3.40.50.300 184 281 1.1E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12363 a912910b683f508d065de03a3abfd701 787 Gene3D G3DSA:3.40.50.300 3 105 1.1E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12363 a912910b683f508d065de03a3abfd701 787 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 268 6.5E-71 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RB12363 a912910b683f508d065de03a3abfd701 787 Gene3D G3DSA:1.10.486.10 385 536 6.0E-43 T 11-11-2016 RB12363 a912910b683f508d065de03a3abfd701 787 Gene3D G3DSA:1.10.10.160 109 183 2.6E-19 T 11-11-2016 IPR013986 DExx box DNA helicase domain RB12363 a912910b683f508d065de03a3abfd701 787 Pfam PF13361 UvrD-like helicase C-terminal domain 273 611 1.0E-66 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RB12363 a912910b683f508d065de03a3abfd701 787 SUPERFAMILY SSF52540 2 635 1.49E-162 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12363 a912910b683f508d065de03a3abfd701 787 Gene3D G3DSA:3.40.50.300 282 384 4.4E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12363 a912910b683f508d065de03a3abfd701 787 Gene3D G3DSA:3.40.50.300 547 638 4.4E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8445 5e688c194444f71c9d89dc134789088f 141 Pfam PF03965 Penicillinase repressor 9 122 5.3E-28 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB8445 5e688c194444f71c9d89dc134789088f 141 Gene3D G3DSA:1.10.10.10 6 78 2.0E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8445 5e688c194444f71c9d89dc134789088f 141 SUPERFAMILY SSF46785 6 123 3.7E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4923 ece11668d3f52006eb8033d9b84007cc 323 SUPERFAMILY SSF103481 76 173 6.54E-11 T 11-11-2016 RB4923 ece11668d3f52006eb8033d9b84007cc 323 Pfam PF00892 EamA-like transporter family 27 171 4.1E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RB4923 ece11668d3f52006eb8033d9b84007cc 323 Pfam PF00892 EamA-like transporter family 185 320 1.5E-20 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RB4923 ece11668d3f52006eb8033d9b84007cc 323 SUPERFAMILY SSF103481 228 321 9.29E-11 T 11-11-2016 RB683 6dfe831f67547d4371beabf07d2d01e3 495 Gene3D G3DSA:3.40.605.10 23 277 3.9E-86 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB683 6dfe831f67547d4371beabf07d2d01e3 495 Pfam PF00171 Aldehyde dehydrogenase family 34 490 7.2E-159 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB683 6dfe831f67547d4371beabf07d2d01e3 495 Gene3D G3DSA:3.40.309.10 278 465 1.2E-61 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB683 6dfe831f67547d4371beabf07d2d01e3 495 SUPERFAMILY SSF53720 20 493 7.33E-151 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB6271 e944f55fefb01fcccad0c7a39284803e 325 SUPERFAMILY SSF56349 34 317 1.24E-60 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB6271 e944f55fefb01fcccad0c7a39284803e 325 Gene3D G3DSA:1.10.150.130 35 125 1.5E-23 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal RB6271 e944f55fefb01fcccad0c7a39284803e 325 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 34 325 53.423 T 11-11-2016 IPR023009 Tyrosine recombinase XerC/XerD RB6271 e944f55fefb01fcccad0c7a39284803e 325 Pfam PF00589 Phage integrase family 138 310 3.0E-46 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB6271 e944f55fefb01fcccad0c7a39284803e 325 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 37 116 2.2E-16 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB6271 e944f55fefb01fcccad0c7a39284803e 325 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 38 325 1.4E-112 T 11-11-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RB6271 e944f55fefb01fcccad0c7a39284803e 325 Gene3D G3DSA:1.10.443.10 138 317 4.1E-58 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB9256 6df3855d479d49745db687a3f11f469e 362 SUPERFAMILY SSF53335 199 274 1.15E-7 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9256 6df3855d479d49745db687a3f11f469e 362 Gene3D G3DSA:3.40.50.150 200 259 6.2E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8835 651f364a1c67a26816e4f776eac1478d 620 Gene3D G3DSA:3.60.21.10 338 339 3.9E-9 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8835 651f364a1c67a26816e4f776eac1478d 620 Gene3D G3DSA:3.60.21.10 386 518 3.9E-9 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8835 651f364a1c67a26816e4f776eac1478d 620 Gene3D G3DSA:3.60.21.10 161 255 3.9E-9 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8835 651f364a1c67a26816e4f776eac1478d 620 Pfam PF09423 PhoD-like phosphatase 148 301 6.6E-11 T 11-11-2016 IPR018946 Alkaline phosphatase D-related RB8835 651f364a1c67a26816e4f776eac1478d 620 Pfam PF09423 PhoD-like phosphatase 370 530 2.0E-21 T 11-11-2016 IPR018946 Alkaline phosphatase D-related RB8835 651f364a1c67a26816e4f776eac1478d 620 SUPERFAMILY SSF56300 384 525 1.09E-10 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8835 651f364a1c67a26816e4f776eac1478d 620 SUPERFAMILY SSF56300 143 192 1.09E-10 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8835 651f364a1c67a26816e4f776eac1478d 620 SUPERFAMILY SSF56300 221 256 1.09E-10 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8835 651f364a1c67a26816e4f776eac1478d 620 SUPERFAMILY SSF49363 42 126 8.89E-6 T 11-11-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 RB9080 1b0124825767d513aeaf2577c0659e7c 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 284 298 5.8E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB9080 1b0124825767d513aeaf2577c0659e7c 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 120 5.8E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB9080 1b0124825767d513aeaf2577c0659e7c 345 PRINTS PR00111 Alpha/beta hydrolase fold signature 155 168 5.8E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB9080 1b0124825767d513aeaf2577c0659e7c 345 Pfam PF12697 Alpha/beta hydrolase family 79 327 9.7E-13 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB9080 1b0124825767d513aeaf2577c0659e7c 345 Gene3D G3DSA:3.40.50.1820 35 237 1.0E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9080 1b0124825767d513aeaf2577c0659e7c 345 Gene3D G3DSA:3.40.50.1820 271 326 1.0E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9080 1b0124825767d513aeaf2577c0659e7c 345 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 251 292 - T 11-11-2016 IPR000952 AB hydrolase 4, conserved site RB9080 1b0124825767d513aeaf2577c0659e7c 345 PIRSF PIRSF005211 3 345 8.1E-55 T 11-11-2016 IPR012020 AB hydrolase 4 family RB9080 1b0124825767d513aeaf2577c0659e7c 345 SUPERFAMILY SSF53474 44 324 1.22E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2797 f9f9fb37061ca6fb3db0243e7ad027a5 380 Gene3D G3DSA:1.10.710.10 81 250 1.6E-16 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB2797 f9f9fb37061ca6fb3db0243e7ad027a5 380 Pfam PF13435 Cytochrome c554 and c-prime 85 162 2.9E-11 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB2797 f9f9fb37061ca6fb3db0243e7ad027a5 380 SUPERFAMILY SSF48695 81 161 4.0E-20 T 11-11-2016 IPR011031 Multihaem cytochrome RB2797 f9f9fb37061ca6fb3db0243e7ad027a5 380 SUPERFAMILY SSF48695 212 222 4.0E-20 T 11-11-2016 IPR011031 Multihaem cytochrome RB1475 0648b36c851b5c4ccba8588def6729e5 579 Gene3D G3DSA:3.40.720.10 134 488 1.7E-103 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1475 0648b36c851b5c4ccba8588def6729e5 579 ProSitePatterns PS00523 Sulfatases signature 1. 180 192 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB1475 0648b36c851b5c4ccba8588def6729e5 579 Pfam PF07636 PSRT 4 30 2.2E-10 T 11-11-2016 IPR011504 PSRT RB1475 0648b36c851b5c4ccba8588def6729e5 579 Pfam PF00884 Sulfatase 136 469 1.1E-61 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB1475 0648b36c851b5c4ccba8588def6729e5 579 SUPERFAMILY SSF53649 134 341 1.6E-113 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB1475 0648b36c851b5c4ccba8588def6729e5 579 SUPERFAMILY SSF53649 369 552 1.6E-113 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB1475 0648b36c851b5c4ccba8588def6729e5 579 Gene3D G3DSA:3.30.1120.10 511 546 9.8E-6 T 11-11-2016 RB11863 5473c1817de3894fe0878274737890b6 375 SUPERFAMILY SSF54752 292 347 3.4E-17 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RB11863 5473c1817de3894fe0878274737890b6 375 PRINTS PR00142 RecA protein signature 188 217 7.8E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 PRINTS PR00142 RecA protein signature 320 337 7.8E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 PRINTS PR00142 RecA protein signature 116 145 7.8E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 PRINTS PR00142 RecA protein signature 150 179 7.8E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 PRINTS PR00142 RecA protein signature 233 261 7.8E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 PRINTS PR00142 RecA protein signature 266 295 7.8E-84 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 Gene3D G3DSA:3.30.250.10 292 346 4.3E-22 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RB11863 5473c1817de3894fe0878274737890b6 375 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 28 345 1.5E-154 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 SMART SM00382 80 251 1.5E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11863 5473c1817de3894fe0878274737890b6 375 Pfam PF00154 recA bacterial DNA recombination protein 32 291 2.5E-128 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 Hamap MF_00268 Protein RecA [recA]. 28 352 48.809 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RB11863 5473c1817de3894fe0878274737890b6 375 Gene3D G3DSA:3.40.50.300 55 290 1.4E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11863 5473c1817de3894fe0878274737890b6 375 SUPERFAMILY SSF52540 33 290 6.05E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4241 3795d406a5f43314673038bdc22b6665 186 Gene3D G3DSA:1.10.10.10 116 178 3.0E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4241 3795d406a5f43314673038bdc22b6665 186 Pfam PF08281 Sigma-70, region 4 121 172 5.4E-8 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4241 3795d406a5f43314673038bdc22b6665 186 SUPERFAMILY SSF88946 16 107 1.65E-18 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4241 3795d406a5f43314673038bdc22b6665 186 Gene3D G3DSA:1.10.1740.10 17 113 3.4E-19 T 11-11-2016 RB4241 3795d406a5f43314673038bdc22b6665 186 Pfam PF04542 Sigma-70 region 2 24 91 5.9E-11 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4241 3795d406a5f43314673038bdc22b6665 186 SUPERFAMILY SSF88659 115 177 2.62E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4241 3795d406a5f43314673038bdc22b6665 186 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 20 176 9.7E-44 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB4241 3795d406a5f43314673038bdc22b6665 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 175 3.4E-24 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4422 67724a915bd722a85b40b1c2f2043958 156 SUPERFAMILY SSF52172 18 146 1.42E-29 T 11-11-2016 IPR011006 CheY-like superfamily RB4422 67724a915bd722a85b40b1c2f2043958 156 Pfam PF00072 Response regulator receiver domain 22 133 2.3E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4422 67724a915bd722a85b40b1c2f2043958 156 SMART SM00448 20 135 2.6E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4422 67724a915bd722a85b40b1c2f2043958 156 Gene3D G3DSA:3.40.50.2300 18 141 6.2E-27 T 11-11-2016 RB9625 ca9e7c38ae005d6aeecad63e70b0caea 145 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 22 85 6.4E-11 T 11-11-2016 IPR008792 Coenzyme PQQ synthesis D RB4152 8955398f64d940eab5fe102a77b4a52d 240 Gene3D G3DSA:3.40.50.150 81 162 2.6E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB4152 8955398f64d940eab5fe102a77b4a52d 240 SUPERFAMILY SSF53335 56 139 1.37E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB3144 b78a543a95593684a2ad3be67026721f 348 Pfam PF00589 Phage integrase family 153 326 1.2E-36 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB3144 b78a543a95593684a2ad3be67026721f 348 Gene3D G3DSA:1.10.443.10 153 330 4.9E-45 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB3144 b78a543a95593684a2ad3be67026721f 348 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 55 137 1.6E-18 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB3144 b78a543a95593684a2ad3be67026721f 348 SUPERFAMILY SSF56349 63 330 1.29E-47 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:2.40.50.150 1016 1030 3.1E-51 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:2.40.50.150 786 895 3.1E-51 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:3.90.1100.10 629 682 2.3E-123 T 11-11-2016 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:3.90.1100.10 415 562 2.3E-123 T 11-11-2016 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:3.90.1100.10 45 168 2.3E-123 T 11-11-2016 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Pfam PF04561 RNA polymerase Rpb2, domain 2 318 424 1.3E-19 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Pfam PF04565 RNA polymerase Rpb2, domain 3 483 551 3.2E-28 T 11-11-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Pfam PF04563 RNA polymerase beta subunit 50 469 3.2E-21 T 11-11-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1034 1046 - T 11-11-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:2.40.270.10 751 778 2.3E-74 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:2.40.270.10 1031 1159 2.3E-74 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 43 1255 0.0 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 SUPERFAMILY SSF64484 45 244 0.0 T 11-11-2016 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 SUPERFAMILY SSF64484 311 897 0.0 T 11-11-2016 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 SUPERFAMILY SSF64484 1010 1257 0.0 T 11-11-2016 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Pfam PF00562 RNA polymerase Rpb2, domain 6 688 1181 2.4E-154 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Pfam PF04560 RNA polymerase Rpb2, domain 7 1183 1257 1.6E-23 T 11-11-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Pfam PF10385 RNA polymerase beta subunit external 1 domain 561 626 1.1E-14 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:2.40.50.100 684 750 1.5E-22 T 11-11-2016 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 36 1259 11.609 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:3.90.1110.10 314 414 1.4E-47 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:3.90.1110.10 170 248 1.4E-47 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB5414 a37902df27e446a8f47cab9c033d5c5f 1261 Gene3D G3DSA:2.30.150.10 563 626 1.1E-15 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB7855 93350ed25ad3ee6e471d02e7b092695e 133 Gene3D G3DSA:3.30.1370.30 1 74 7.8E-24 T 11-11-2016 RB7855 93350ed25ad3ee6e471d02e7b092695e 133 ProSitePatterns PS00053 Ribosomal protein S8 signature. 103 120 - T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7855 93350ed25ad3ee6e471d02e7b092695e 133 SUPERFAMILY SSF56047 1 132 5.89E-42 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7855 93350ed25ad3ee6e471d02e7b092695e 133 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 133 30.542 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7855 93350ed25ad3ee6e471d02e7b092695e 133 Pfam PF00410 Ribosomal protein S8 4 132 5.3E-46 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7855 93350ed25ad3ee6e471d02e7b092695e 133 Gene3D G3DSA:3.30.1490.10 77 132 4.5E-25 T 11-11-2016 RB6492 c1037e104b6f6589ce635ab0a5e3cb38 199 Pfam PF13662 Toprim domain 82 172 1.4E-18 T 11-11-2016 IPR006171 Toprim domain RB6492 c1037e104b6f6589ce635ab0a5e3cb38 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 87.945 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RB6492 c1037e104b6f6589ce635ab0a5e3cb38 199 TIGRFAM TIGR00615 recR: recombination protein RecR 7 197 1.1E-69 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RB6492 c1037e104b6f6589ce635ab0a5e3cb38 199 SUPERFAMILY SSF111304 6 199 4.05E-67 T 11-11-2016 IPR023627 Recombination protein RecR RB6492 c1037e104b6f6589ce635ab0a5e3cb38 199 Pfam PF02132 RecR protein 40 79 3.6E-17 T 11-11-2016 IPR023628 Recombination protein RecR, C4-type zinc finger RB6492 c1037e104b6f6589ce635ab0a5e3cb38 199 SMART SM00493 81 166 1.7E-4 T 11-11-2016 IPR006171 Toprim domain RB6492 c1037e104b6f6589ce635ab0a5e3cb38 199 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 11-11-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 RB8181 f2cc49b2bce87bdea24e99004317889b 807 SUPERFAMILY SSF52317 322 368 1.83E-37 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8181 f2cc49b2bce87bdea24e99004317889b 807 SUPERFAMILY SSF52317 418 626 1.83E-37 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8181 f2cc49b2bce87bdea24e99004317889b 807 Gene3D G3DSA:2.60.40.920 637 712 4.2E-6 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RB8181 f2cc49b2bce87bdea24e99004317889b 807 SUPERFAMILY SSF49373 640 712 1.26E-5 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments RB8181 f2cc49b2bce87bdea24e99004317889b 807 Gene3D G3DSA:3.40.50.880 320 375 8.1E-32 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8181 f2cc49b2bce87bdea24e99004317889b 807 Gene3D G3DSA:3.40.50.880 427 624 8.1E-32 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB5620 9b933ba36d490232e844eefe75382d3c 321 SMART SM00987 166 312 3.4E-37 T 11-11-2016 RB5620 9b933ba36d490232e844eefe75382d3c 321 Pfam PF03167 Uracil DNA glycosylase superfamily 166 312 1.2E-43 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB5620 9b933ba36d490232e844eefe75382d3c 321 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 151 314 3.4E-59 T 11-11-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RB5620 9b933ba36d490232e844eefe75382d3c 321 Gene3D G3DSA:3.40.470.10 141 316 5.6E-65 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB5620 9b933ba36d490232e844eefe75382d3c 321 SUPERFAMILY SSF52141 136 315 1.41E-58 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB5620 9b933ba36d490232e844eefe75382d3c 321 SMART SM00986 166 312 3.4E-37 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB12934 3d54cb863dbd9d78be459ad60e9035c7 253 Gene3D G3DSA:3.20.20.10 8 247 1.0E-66 T 11-11-2016 IPR029066 PLP-binding barrel RB12934 3d54cb863dbd9d78be459ad60e9035c7 253 SUPERFAMILY SSF51419 20 246 1.44E-58 T 11-11-2016 IPR029066 PLP-binding barrel RB12934 3d54cb863dbd9d78be459ad60e9035c7 253 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 24 247 1.3E-41 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 RB12934 3d54cb863dbd9d78be459ad60e9035c7 253 Pfam PF01168 Alanine racemase, N-terminal domain 99 246 1.3E-12 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RB12934 3d54cb863dbd9d78be459ad60e9035c7 253 PIRSF PIRSF004848 1 252 5.5E-74 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 RB11853 8857ef2b096f83534f0b09db5f096b5f 229 Gene3D G3DSA:1.10.286.10 43 94 3.2E-24 T 11-11-2016 RB11853 8857ef2b096f83534f0b09db5f096b5f 229 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 104 120 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RB11853 8857ef2b096f83534f0b09db5f096b5f 229 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 48 225 4.9E-73 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RB11853 8857ef2b096f83534f0b09db5f096b5f 229 Gene3D G3DSA:3.30.1130.10 97 226 1.4E-58 T 11-11-2016 RB11853 8857ef2b096f83534f0b09db5f096b5f 229 Pfam PF01227 GTP cyclohydrolase I 48 224 1.1E-77 T 11-11-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RB11853 8857ef2b096f83534f0b09db5f096b5f 229 SUPERFAMILY SSF55620 31 225 3.48E-77 T 11-11-2016 RB11853 8857ef2b096f83534f0b09db5f096b5f 229 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 44 225 41.087 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RB11853 8857ef2b096f83534f0b09db5f096b5f 229 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 152 162 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 1.9E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 1.9E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 1.9E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 SUPERFAMILY SSF51735 18 261 1.19E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 8.0E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 8.0E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 8.0E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 8.0E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 8.0E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 8.0E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10272 1fe333960a08411184705aae7dcf2cbc 274 Gene3D G3DSA:3.40.50.720 16 261 5.2E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10272 1fe333960a08411184705aae7dcf2cbc 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 31 258 8.9E-46 T 11-11-2016 RB6770 9c27c9a06c2157ec16df3784da616054 81 Gene3D G3DSA:2.40.50.100 20 77 7.6E-29 T 11-11-2016 RB6770 9c27c9a06c2157ec16df3784da616054 81 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 1.0E-17 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6770 9c27c9a06c2157ec16df3784da616054 81 Pfam PF01016 Ribosomal L27 protein 2 78 3.8E-36 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6770 9c27c9a06c2157ec16df3784da616054 81 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 81 26.268 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6770 9c27c9a06c2157ec16df3784da616054 81 SUPERFAMILY SSF110324 2 77 6.63E-33 T 11-11-2016 RB6770 9c27c9a06c2157ec16df3784da616054 81 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.0E-35 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6770 9c27c9a06c2157ec16df3784da616054 81 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.0E-35 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6770 9c27c9a06c2157ec16df3784da616054 81 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.0E-35 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6770 9c27c9a06c2157ec16df3784da616054 81 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 76 3.2E-34 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB4854 6710715646fb707b15e566a6d3ef14ef 434 Pfam PF07586 Protein of unknown function (DUF1552) 45 336 4.9E-75 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB1561 e9a393d6b0da046c9eea0f291aef9580 235 Pfam PF00834 Ribulose-phosphate 3 epimerase family 16 208 2.3E-64 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RB1561 e9a393d6b0da046c9eea0f291aef9580 235 Gene3D G3DSA:3.20.20.70 14 226 6.8E-82 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB1561 e9a393d6b0da046c9eea0f291aef9580 235 SUPERFAMILY SSF51366 15 224 1.04E-64 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB1561 e9a393d6b0da046c9eea0f291aef9580 235 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 16 220 3.9E-70 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RB1561 e9a393d6b0da046c9eea0f291aef9580 235 PIRSF PIRSF001461 11 230 1.9E-75 T 11-11-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RB1561 e9a393d6b0da046c9eea0f291aef9580 235 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 43 57 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RB10617 453bbba1091f2d12fc993ae6035683b1 413 Gene3D G3DSA:3.30.1490.20 41 122 1.6E-30 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB10617 453bbba1091f2d12fc993ae6035683b1 413 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 20 413 39.583 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RB10617 453bbba1091f2d12fc993ae6035683b1 413 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 20 411 9.5E-151 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RB10617 453bbba1091f2d12fc993ae6035683b1 413 Pfam PF00549 CoA-ligase 289 408 9.7E-24 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RB10617 453bbba1091f2d12fc993ae6035683b1 413 SUPERFAMILY SSF56059 20 265 5.4E-78 T 11-11-2016 RB10617 453bbba1091f2d12fc993ae6035683b1 413 Pfam PF08442 ATP-grasp domain 21 230 6.7E-71 T 11-11-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RB10617 453bbba1091f2d12fc993ae6035683b1 413 SUPERFAMILY SSF52210 267 410 5.76E-52 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RB10617 453bbba1091f2d12fc993ae6035683b1 413 Gene3D G3DSA:3.40.50.261 269 410 8.8E-62 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RB10617 453bbba1091f2d12fc993ae6035683b1 413 PIRSF PIRSF001554 20 413 2.3E-143 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RB10617 453bbba1091f2d12fc993ae6035683b1 413 Gene3D G3DSA:3.30.470.20 123 265 3.6E-55 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB10617 453bbba1091f2d12fc993ae6035683b1 413 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 284 309 - T 11-11-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RB1184 0448870c822d54869ede981d78b2cac7 98 Pfam PF07590 Protein of unknown function (DUF1556) 1 82 1.3E-45 T 11-11-2016 IPR011450 Protein of unknown function DUF1556 RB2560 0448870c822d54869ede981d78b2cac7 98 Pfam PF07590 Protein of unknown function (DUF1556) 1 82 1.3E-45 T 11-11-2016 IPR011450 Protein of unknown function DUF1556 RB3146 0448870c822d54869ede981d78b2cac7 98 Pfam PF07590 Protein of unknown function (DUF1556) 1 82 1.3E-45 T 11-11-2016 IPR011450 Protein of unknown function DUF1556 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 SUPERFAMILY SSF53150 111 295 1.83E-33 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 SUPERFAMILY SSF48334 282 581 2.22E-86 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 706 722 - T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 SMART SM00534 625 812 6.3E-116 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 874 24.839 T 11-11-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Pfam PF05192 MutS domain III 284 575 4.7E-37 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 2 879 5.1E-291 T 11-11-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Gene3D G3DSA:3.40.1170.10 1 114 5.2E-46 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 SMART SM00533 299 607 1.6E-95 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 PIRSF PIRSF037677 1 828 2.6E-162 T 11-11-2016 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Gene3D G3DSA:1.10.1420.10 279 484 2.9E-50 T 11-11-2016 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 SUPERFAMILY SSF52540 583 815 1.69E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7237 b5bd60f956e12bf0fbc90a175da12251 891 SUPERFAMILY SSF55271 1 109 8.63E-38 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Gene3D G3DSA:3.30.420.110 121 270 7.6E-32 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Pfam PF05188 MutS domain II 150 268 5.1E-18 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Gene3D G3DSA:3.40.50.300 583 815 1.0E-84 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Pfam PF05190 MutS family domain IV 444 534 5.7E-31 T 11-11-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Pfam PF00488 MutS domain V 629 815 7.1E-86 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RB7237 b5bd60f956e12bf0fbc90a175da12251 891 Pfam PF01624 MutS domain I 2 113 2.5E-39 T 11-11-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 RB6644 bd6eaf92e6ab6e197e640fc80158abd5 1128 SUPERFAMILY SSF56112 193 359 3.42E-14 T 11-11-2016 IPR011009 Protein kinase-like domain RB6644 bd6eaf92e6ab6e197e640fc80158abd5 1128 Pfam PF00069 Protein kinase domain 200 317 8.0E-7 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB6644 bd6eaf92e6ab6e197e640fc80158abd5 1128 Gene3D G3DSA:1.10.510.10 197 402 3.7E-12 T 11-11-2016 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 SUPERFAMILY SSF52540 142 383 3.62E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 SUPERFAMILY SSF46689 403 468 7.89E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 SMART SM00448 5 116 3.6E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 Pfam PF00072 Response regulator receiver domain 7 111 8.0E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 448 468 1.6E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 448 1.6E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 Gene3D G3DSA:1.10.8.60 315 386 3.0E-15 T 11-11-2016 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 Pfam PF02954 Bacterial regulatory protein, Fis family 425 465 7.8E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 SMART SM00382 162 305 5.5E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 Gene3D G3DSA:3.40.50.300 142 314 9.1E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 SUPERFAMILY SSF52172 5 187 8.4E-41 T 11-11-2016 IPR011006 CheY-like superfamily RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 Gene3D G3DSA:1.10.10.60 410 468 2.5E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 Gene3D G3DSA:3.40.50.2300 6 128 2.0E-33 T 11-11-2016 RB11036 6dab19fdf1df097e3d47ff90afa5aaad 470 Pfam PF00158 Sigma-54 interaction domain 142 309 1.0E-63 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB5998 170177c7f2b8cb843ee26778d6115df0 172 SUPERFAMILY SSF89623 25 169 6.02E-52 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB5998 170177c7f2b8cb843ee26778d6115df0 172 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 29 170 2.6E-50 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB5998 170177c7f2b8cb843ee26778d6115df0 172 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 28 168 9.3E-46 T 11-11-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 RB5998 170177c7f2b8cb843ee26778d6115df0 172 Pfam PF02502 Ribose/Galactose Isomerase 29 166 8.7E-51 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB5998 170177c7f2b8cb843ee26778d6115df0 172 PIRSF PIRSF005384 26 172 1.8E-60 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB5998 170177c7f2b8cb843ee26778d6115df0 172 Gene3D G3DSA:3.40.1400.10 26 170 6.8E-56 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Pfam PF04616 Glycosyl hydrolases family 43 1279 1543 5.3E-21 T 11-11-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 SUPERFAMILY SSF49899 593 715 8.64E-5 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Gene3D G3DSA:3.40.720.10 745 1031 9.8E-79 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Gene3D G3DSA:3.40.720.10 50 498 3.9E-118 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Gene3D G3DSA:3.30.1120.10 1107 1159 1.9E-11 T 11-11-2016 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Gene3D G3DSA:3.30.1120.10 1048 1068 1.9E-11 T 11-11-2016 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Gene3D G3DSA:3.30.1120.10 499 574 7.2E-21 T 11-11-2016 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Pfam PF00884 Sulfatase 871 1013 2.4E-24 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Pfam PF00884 Sulfatase 53 470 1.1E-73 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Pfam PF00884 Sulfatase 747 847 2.4E-23 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 SUPERFAMILY SSF53649 1108 1153 4.07E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 SUPERFAMILY SSF53649 746 1069 4.07E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 SUPERFAMILY SSF75005 1278 1588 2.43E-41 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 SUPERFAMILY SSF53649 51 571 2.47E-137 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 Gene3D G3DSA:2.115.10.20 1278 1553 1.3E-43 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB2377 80197d7c5d54d6ca011c4b4fd12acd6d 1610 ProSitePatterns PS00523 Sulfatases signature 1. 793 805 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB631 55d478701a3651b8e4cdcab201318f08 779 Gene3D G3DSA:1.10.510.10 194 400 1.5E-39 T 11-11-2016 RB631 55d478701a3651b8e4cdcab201318f08 779 SUPERFAMILY SSF56112 77 382 9.44E-62 T 11-11-2016 IPR011009 Protein kinase-like domain RB631 55d478701a3651b8e4cdcab201318f08 779 SMART SM00220 86 388 1.9E-58 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB631 55d478701a3651b8e4cdcab201318f08 779 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 205 217 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB631 55d478701a3651b8e4cdcab201318f08 779 Pfam PF00069 Protein kinase domain 86 316 6.1E-42 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB631 55d478701a3651b8e4cdcab201318f08 779 SUPERFAMILY SSF48452 652 716 8.35E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB631 55d478701a3651b8e4cdcab201318f08 779 SUPERFAMILY SSF48452 477 544 8.35E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB631 55d478701a3651b8e4cdcab201318f08 779 Gene3D G3DSA:1.25.40.10 481 589 2.4E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB631 55d478701a3651b8e4cdcab201318f08 779 Gene3D G3DSA:1.25.40.10 659 716 2.4E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB631 55d478701a3651b8e4cdcab201318f08 779 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 92 116 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB631 55d478701a3651b8e4cdcab201318f08 779 Gene3D G3DSA:3.30.200.20 81 193 1.7E-21 T 11-11-2016 RB1310 9d47bcab582a75f3c12d62a19cbfc391 253 Gene3D G3DSA:3.40.50.300 1 222 3.0E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1310 9d47bcab582a75f3c12d62a19cbfc391 253 SMART SM00382 26 215 5.0E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1310 9d47bcab582a75f3c12d62a19cbfc391 253 Pfam PF00005 ABC transporter 18 158 1.7E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB1310 9d47bcab582a75f3c12d62a19cbfc391 253 SUPERFAMILY SSF52540 1 221 1.04E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4087 53a9768529a63ff498ebb309e496d634 252 SUPERFAMILY SSF52540 41 249 1.78E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4087 53a9768529a63ff498ebb309e496d634 252 Gene3D G3DSA:3.40.50.300 41 249 7.2E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4087 53a9768529a63ff498ebb309e496d634 252 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 45 200 1.1E-19 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RB7091 00b8bfd45c5b9774101895151b746e82 342 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 24 342 1.3E-56 T 11-11-2016 IPR005229 Conserved hypothetical protein CHP00255 RB7091 00b8bfd45c5b9774101895151b746e82 342 Pfam PF03755 YicC-like family, N-terminal region 24 190 1.3E-32 T 11-11-2016 IPR013527 YicC-like, N-terminal RB7091 00b8bfd45c5b9774101895151b746e82 342 Pfam PF08340 Domain of unknown function (DUF1732) 245 342 1.1E-32 T 11-11-2016 IPR013551 Domain of unknown function DUF1732 RB1199 21ddab4a91415acb26be15c16b1b44d3 181 SUPERFAMILY SSF54523 16 121 6.2E-11 T 11-11-2016 RB1199 21ddab4a91415acb26be15c16b1b44d3 181 TIGRFAM TIGR04294 pre_pil_HX9DG: prepilin-type processing-associated H-X9-DG domain 141 153 9.3E-4 T 11-11-2016 IPR027558 Prepilin-type processing-associated H-X9-DG domain RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 Gene3D G3DSA:3.40.1110.10 354 433 3.5E-5 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 Gene3D G3DSA:2.70.150.10 140 245 4.8E-17 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 Gene3D G3DSA:3.40.50.1000 455 591 1.4E-30 T 11-11-2016 IPR023214 HAD-like domain RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 Gene3D G3DSA:3.40.50.1000 313 353 1.4E-30 T 11-11-2016 IPR023214 HAD-like domain RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 SUPERFAMILY SSF56784 398 636 2.77E-34 T 11-11-2016 IPR023214 HAD-like domain RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 SUPERFAMILY SSF56784 337 355 2.77E-34 T 11-11-2016 IPR023214 HAD-like domain RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 118 614 1.7E-48 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 Pfam PF00702 haloacid dehalogenase-like hydrolase 334 549 2.0E-26 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 Pfam PF00122 E1-E2 ATPase 117 328 9.2E-45 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 SUPERFAMILY SSF81653 148 244 1.7E-18 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 SUPERFAMILY SSF81665 246 328 1.2E-6 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 SUPERFAMILY SSF81665 99 149 1.2E-6 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 339 345 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 96 638 4.3E-145 T 11-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 460 471 1.8E-19 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 195 209 1.8E-19 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 559 571 1.8E-19 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 555 1.8E-19 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 484 494 1.8E-19 T 11-11-2016 RB4891 c3c5c73309faf81e15cb2e0b92bd5ef9 648 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 337 351 1.8E-19 T 11-11-2016 RB4856 af643ab6325f6eedecb130e7df8b202b 849 Pfam PF07624 Protein of unknown function (DUF1585) 774 846 7.0E-20 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB4856 af643ab6325f6eedecb130e7df8b202b 849 Pfam PF07635 Planctomycete cytochrome C 41 89 9.1E-9 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB4856 af643ab6325f6eedecb130e7df8b202b 849 Pfam PF07631 Protein of unknown function (DUF1592) 502 629 2.6E-38 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB4856 af643ab6325f6eedecb130e7df8b202b 849 Pfam PF07627 Protein of unknown function (DUF1588) 648 745 9.9E-32 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB4856 af643ab6325f6eedecb130e7df8b202b 849 Pfam PF07637 Protein of unknown function (DUF1595) 430 492 2.2E-16 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB4856 af643ab6325f6eedecb130e7df8b202b 849 Pfam PF07626 Protein of unknown function (DUF1587) 126 184 2.2E-17 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB7587 8572e963357c38cccf79e39107fe5078 388 SUPERFAMILY SSF101790 295 383 3.6E-23 T 11-11-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RB7587 8572e963357c38cccf79e39107fe5078 388 Gene3D G3DSA:3.30.70.1400 70 152 2.6E-22 T 11-11-2016 RB7587 8572e963357c38cccf79e39107fe5078 388 PIRSF PIRSF006487 1 388 4.1E-104 T 11-11-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RB7587 8572e963357c38cccf79e39107fe5078 388 Pfam PF01571 Aminomethyltransferase folate-binding domain 24 279 2.2E-91 T 11-11-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RB7587 8572e963357c38cccf79e39107fe5078 388 Gene3D G3DSA:2.40.30.110 303 383 8.2E-23 T 11-11-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RB7587 8572e963357c38cccf79e39107fe5078 388 SUPERFAMILY SSF103025 19 301 2.02E-87 T 11-11-2016 RB7587 8572e963357c38cccf79e39107fe5078 388 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 21 383 2.6E-99 T 11-11-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RB7587 8572e963357c38cccf79e39107fe5078 388 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 287 373 2.1E-20 T 11-11-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RB7587 8572e963357c38cccf79e39107fe5078 388 Gene3D G3DSA:3.30.1360.120 21 69 3.9E-50 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RB7587 8572e963357c38cccf79e39107fe5078 388 Gene3D G3DSA:3.30.1360.120 163 257 3.9E-50 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.120.10.30 179 316 3.9E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.120.10.30 1513 1564 3.9E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.120.10.30 943 977 3.9E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.60.40.60 1093 1187 6.6E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.60.40.60 1393 1504 9.3E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.60.40.60 1292 1392 1.9E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SUPERFAMILY SSF117074 56 130 6.02E-11 T 11-11-2016 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.60.40.60 1198 1288 1.1E-14 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.60.40.10 58 124 8.7E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SUPERFAMILY SSF49313 1622 1696 7.85E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Pfam PF00404 Dockerin type I repeat 1765 1785 5.5E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SUPERFAMILY SSF49313 1299 1391 2.28E-8 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Gene3D G3DSA:2.60.40.10 1622 1710 1.4E-9 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SUPERFAMILY SSF49313 1197 1289 1.31E-13 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SUPERFAMILY SSF49313 1093 1185 2.62E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Pfam PF00028 Cadherin domain 1199 1287 1.0E-9 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 Pfam PF00028 Cadherin domain 1094 1181 2.9E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SMART SM00112 1109 1191 7.4E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SMART SM00112 1414 1503 0.092 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SMART SM00112 1314 1394 7.7E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SMART SM00112 1533 1612 0.039 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SMART SM00112 1212 1295 6.7E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB9376 c6036d534e736e64f864f4bfb97f6174 1827 SUPERFAMILY SSF63825 179 350 1.44E-12 T 11-11-2016 RB2638 86865ef45092b722674befe596651bba 736 PIRSF PIRSF000463 6 736 6.1E-299 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RB2638 86865ef45092b722674befe596651bba 736 Gene3D G3DSA:2.60.40.10 118 226 1.7E-38 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB2638 86865ef45092b722674befe596651bba 736 Gene3D G3DSA:2.60.40.10 14 105 8.1E-10 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB2638 86865ef45092b722674befe596651bba 736 SUPERFAMILY SSF81296 19 116 5.6E-10 T 11-11-2016 IPR014756 Immunoglobulin E-set RB2638 86865ef45092b722674befe596651bba 736 Pfam PF00128 Alpha amylase, catalytic domain 283 354 1.7E-5 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB2638 86865ef45092b722674befe596651bba 736 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 114 733 3.2E-281 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RB2638 86865ef45092b722674befe596651bba 736 SUPERFAMILY SSF51011 632 735 2.88E-33 T 11-11-2016 RB2638 86865ef45092b722674befe596651bba 736 Gene3D G3DSA:3.20.20.80 249 616 4.4E-88 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB2638 86865ef45092b722674befe596651bba 736 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 105 735 44.717 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RB2638 86865ef45092b722674befe596651bba 736 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 130 212 5.3E-22 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RB2638 86865ef45092b722674befe596651bba 736 SMART SM00642 256 627 8.6E-6 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB2638 86865ef45092b722674befe596651bba 736 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 636 734 3.3E-22 T 11-11-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RB2638 86865ef45092b722674befe596651bba 736 SUPERFAMILY SSF51445 186 624 3.5E-113 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB2638 86865ef45092b722674befe596651bba 736 Gene3D G3DSA:2.60.40.1180 632 734 6.9E-35 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta RB2638 86865ef45092b722674befe596651bba 736 SUPERFAMILY SSF81296 143 205 1.23E-9 T 11-11-2016 IPR014756 Immunoglobulin E-set RB3177 fa89cc70ed3cf9e611fffd7cb6a1aa2e 707 Gene3D G3DSA:3.40.720.10 101 200 1.9E-24 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3177 fa89cc70ed3cf9e611fffd7cb6a1aa2e 707 SUPERFAMILY SSF53649 101 516 9.65E-83 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3177 fa89cc70ed3cf9e611fffd7cb6a1aa2e 707 Pfam PF00884 Sulfatase 226 374 1.6E-20 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3177 fa89cc70ed3cf9e611fffd7cb6a1aa2e 707 Pfam PF00884 Sulfatase 102 192 2.7E-14 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3177 fa89cc70ed3cf9e611fffd7cb6a1aa2e 707 Gene3D G3DSA:3.40.720.10 223 414 3.0E-33 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3177 fa89cc70ed3cf9e611fffd7cb6a1aa2e 707 Gene3D G3DSA:3.30.1120.10 415 430 9.3E-16 T 11-11-2016 RB3177 fa89cc70ed3cf9e611fffd7cb6a1aa2e 707 Gene3D G3DSA:3.30.1120.10 468 516 9.3E-16 T 11-11-2016 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 284 584 6.9E-83 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 Pfam PF13180 PDZ domain 311 378 3.2E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 SMART SM00228 310 381 1.3E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 SMART SM00245 382 574 9.1E-56 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 SUPERFAMILY SSF52096 404 579 5.3E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 SUPERFAMILY SSF52096 269 328 5.3E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 Pfam PF03572 Peptidase family S41 410 572 1.7E-50 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 Gene3D G3DSA:3.30.750.44 269 315 6.1E-4 T 11-11-2016 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 Gene3D G3DSA:2.30.42.10 316 391 1.1E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 SUPERFAMILY SSF50156 283 394 1.89E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB3195 5f7ddaa9368f5f0d01c5e87618fc1d5e 609 Gene3D G3DSA:3.90.226.10 392 606 2.3E-57 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB11907 3519736514363820e3060ea84d6ce5c6 158 Gene3D G3DSA:2.30.110.10 4 154 2.7E-37 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB11907 3519736514363820e3060ea84d6ce5c6 158 SUPERFAMILY SSF50475 6 153 1.18E-31 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB11907 3519736514363820e3060ea84d6ce5c6 158 PIRSF PIRSF004633 7 155 1.5E-7 T 11-11-2016 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain RB11907 3519736514363820e3060ea84d6ce5c6 158 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 9 150 2.4E-16 T 11-11-2016 RB6827 05c65dfff7179592dc58833384e407cb 966 SUPERFAMILY SSF53067 425 606 9.28E-11 T 11-11-2016 RB6827 05c65dfff7179592dc58833384e407cb 966 PRINTS PR00301 70kDa heat shock protein signature 569 589 2.3E-6 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB6827 05c65dfff7179592dc58833384e407cb 966 PRINTS PR00301 70kDa heat shock protein signature 912 928 2.3E-6 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB6827 05c65dfff7179592dc58833384e407cb 966 PRINTS PR00301 70kDa heat shock protein signature 424 437 2.3E-6 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB6827 05c65dfff7179592dc58833384e407cb 966 PRINTS PR00301 70kDa heat shock protein signature 774 790 2.3E-6 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB6827 05c65dfff7179592dc58833384e407cb 966 Gene3D G3DSA:3.30.200.20 100 170 5.9E-21 T 11-11-2016 RB6827 05c65dfff7179592dc58833384e407cb 966 Pfam PF00069 Protein kinase domain 104 379 5.2E-44 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB6827 05c65dfff7179592dc58833384e407cb 966 Gene3D G3DSA:1.10.510.10 171 383 1.3E-42 T 11-11-2016 RB6827 05c65dfff7179592dc58833384e407cb 966 Gene3D G3DSA:3.30.420.40 425 606 3.6E-11 T 11-11-2016 RB6827 05c65dfff7179592dc58833384e407cb 966 SMART SM00220 104 386 4.0E-56 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB6827 05c65dfff7179592dc58833384e407cb 966 SUPERFAMILY SSF100920 836 938 1.19E-9 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RB6827 05c65dfff7179592dc58833384e407cb 966 SUPERFAMILY SSF53067 642 816 1.58E-11 T 11-11-2016 RB6827 05c65dfff7179592dc58833384e407cb 966 Pfam PF00012 Hsp70 protein 569 931 5.4E-16 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB6827 05c65dfff7179592dc58833384e407cb 966 SUPERFAMILY SSF56112 279 385 7.82E-68 T 11-11-2016 IPR011009 Protein kinase-like domain RB6827 05c65dfff7179592dc58833384e407cb 966 SUPERFAMILY SSF56112 102 251 7.82E-68 T 11-11-2016 IPR011009 Protein kinase-like domain RB6827 05c65dfff7179592dc58833384e407cb 966 Gene3D G3DSA:2.60.34.10 830 939 5.6E-6 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RB6827 05c65dfff7179592dc58833384e407cb 966 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 110 133 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB12633 3c991b7abc732a1ff37aa3de8fbf6e3b 316 Gene3D G3DSA:2.60.120.650 27 72 1.2E-26 T 11-11-2016 RB12633 3c991b7abc732a1ff37aa3de8fbf6e3b 316 Gene3D G3DSA:2.60.120.650 109 207 1.2E-26 T 11-11-2016 RB12633 3c991b7abc732a1ff37aa3de8fbf6e3b 316 SMART SM00558 69 223 2.5E-5 T 11-11-2016 IPR003347 JmjC domain RB12633 3c991b7abc732a1ff37aa3de8fbf6e3b 316 SUPERFAMILY SSF51197 17 278 6.45E-34 T 11-11-2016 RB12633 3c991b7abc732a1ff37aa3de8fbf6e3b 316 Pfam PF13621 Cupin-like domain 108 205 6.5E-11 T 11-11-2016 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 401 510 8.0E-17 T 11-11-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 30 40 9.5E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 91 103 9.5E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 332 338 9.5E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 46 58 9.5E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 29 9.5E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 363 375 9.5E-28 T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 Gene3D G3DSA:3.50.50.60 17 275 8.3E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 Pfam PF01266 FAD dependent oxidoreductase 18 369 3.0E-47 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 22 39 - T 11-11-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 RB3763 9d1d8b3c00225f20c5a02528f006fad3 530 SUPERFAMILY SSF51905 17 342 1.51E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8492 6e2e97af888654ab36982a1961c7ce64 211 Pfam PF04542 Sigma-70 region 2 39 105 6.8E-13 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8492 6e2e97af888654ab36982a1961c7ce64 211 SUPERFAMILY SSF88946 17 116 5.49E-26 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8492 6e2e97af888654ab36982a1961c7ce64 211 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 61 92 - T 11-11-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8492 6e2e97af888654ab36982a1961c7ce64 211 Pfam PF08281 Sigma-70, region 4 141 191 9.0E-15 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8492 6e2e97af888654ab36982a1961c7ce64 211 Gene3D G3DSA:1.10.1740.10 18 116 2.3E-28 T 11-11-2016 RB8492 6e2e97af888654ab36982a1961c7ce64 211 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 194 7.8E-27 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8492 6e2e97af888654ab36982a1961c7ce64 211 Gene3D G3DSA:1.10.10.10 133 197 5.1E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8492 6e2e97af888654ab36982a1961c7ce64 211 SUPERFAMILY SSF88659 134 194 1.87E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1593 e94eb7ef1b2bec782b2a5250ddf41217 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 742 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RB1593 e94eb7ef1b2bec782b2a5250ddf41217 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 8 739 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RB1593 e94eb7ef1b2bec782b2a5250ddf41217 743 Gene3D G3DSA:3.40.718.10 341 364 4.9E-28 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB1593 e94eb7ef1b2bec782b2a5250ddf41217 743 Gene3D G3DSA:3.40.718.10 540 646 4.9E-28 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB1593 e94eb7ef1b2bec782b2a5250ddf41217 743 Gene3D G3DSA:3.40.718.10 166 286 4.9E-28 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB1593 e94eb7ef1b2bec782b2a5250ddf41217 743 PIRSF PIRSF009407 1 742 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RB1593 e94eb7ef1b2bec782b2a5250ddf41217 743 SUPERFAMILY SSF53659 6 741 0.0 T 11-11-2016 RB2367 02d1b3e2fca81ae8e606205c09ed19b7 789 Gene3D G3DSA:3.30.1120.10 515 602 1.1E-17 T 11-11-2016 RB2367 02d1b3e2fca81ae8e606205c09ed19b7 789 Gene3D G3DSA:3.40.720.10 70 510 8.4E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2367 02d1b3e2fca81ae8e606205c09ed19b7 789 Pfam PF00884 Sulfatase 72 482 5.2E-81 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2367 02d1b3e2fca81ae8e606205c09ed19b7 789 SUPERFAMILY SSF53649 72 596 2.91E-129 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9210 86c33fada75571a879d8eb61f85df526 395 Pfam PF00266 Aminotransferase class-V 2 380 8.7E-61 T 11-11-2016 IPR000192 Aminotransferase class V domain RB9210 86c33fada75571a879d8eb61f85df526 395 Gene3D G3DSA:3.40.640.10 13 260 1.3E-74 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB9210 86c33fada75571a879d8eb61f85df526 395 SUPERFAMILY SSF53383 1 389 6.32E-87 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB9210 86c33fada75571a879d8eb61f85df526 395 PIRSF PIRSF005572 1 393 3.9E-105 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RB9210 86c33fada75571a879d8eb61f85df526 395 Gene3D G3DSA:3.90.1150.10 261 386 1.3E-35 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB7306 e5517d3cbbdec69fccfa37c64062be83 414 Pfam PF13458 Periplasmic binding protein 52 396 2.6E-51 T 11-11-2016 IPR028081 Leucine-binding protein domain RB7306 e5517d3cbbdec69fccfa37c64062be83 414 Gene3D G3DSA:3.40.50.2300 50 175 1.3E-30 T 11-11-2016 RB7306 e5517d3cbbdec69fccfa37c64062be83 414 Gene3D G3DSA:3.40.50.2300 334 388 1.3E-30 T 11-11-2016 RB7306 e5517d3cbbdec69fccfa37c64062be83 414 Gene3D G3DSA:3.40.50.2300 176 333 8.0E-8 T 11-11-2016 RB7306 e5517d3cbbdec69fccfa37c64062be83 414 SUPERFAMILY SSF53822 51 406 3.26E-58 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB10413 4d84ac3740359a93878a331f4e1292dc 1352 Gene3D G3DSA:1.10.1330.10 1249 1310 5.5E-5 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 Pfam PF00404 Dockerin type I repeat 1249 1268 9.5E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 Pfam PF00404 Dockerin type I repeat 1289 1308 1.3E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 SUPERFAMILY SSF63446 1249 1310 1.02E-6 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 SUPERFAMILY SSF52743 561 664 1.57E-32 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 SUPERFAMILY SSF52743 484 533 1.57E-32 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 SUPERFAMILY SSF52743 194 212 1.57E-32 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 SUPERFAMILY SSF52743 244 350 1.57E-32 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 591 601 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site RB10413 4d84ac3740359a93878a331f4e1292dc 1352 Pfam PF00082 Subtilase family 294 646 1.3E-11 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 Gene3D G3DSA:3.40.50.200 265 346 3.3E-26 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB10413 4d84ac3740359a93878a331f4e1292dc 1352 Gene3D G3DSA:3.40.50.200 495 659 3.3E-26 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RB2461 54db445998c79cf6eb56e0c9837b58b4 632 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 217 305 2.0E-14 T 11-11-2016 IPR026392 Exosortase/Archaeosortase domain RB2461 54db445998c79cf6eb56e0c9837b58b4 632 TIGRFAM TIGR02602 8TM_EpsH: exosortase 74 311 2.4E-84 T 11-11-2016 IPR013426 Exosortase, EpsH RB2461 54db445998c79cf6eb56e0c9837b58b4 632 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 59 305 2.9E-35 T 11-11-2016 IPR019127 Exosortase EpsH-related RB4167 e53356163981cf1ead8e277404578b76 979 Gene3D G3DSA:1.10.760.10 826 969 4.8E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4167 e53356163981cf1ead8e277404578b76 979 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 832 968 1.9E-30 T 11-11-2016 IPR013427 Haem-binding domain, putative RB4167 e53356163981cf1ead8e277404578b76 979 Gene3D G3DSA:2.120.10.30 16 434 8.7E-69 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB4167 e53356163981cf1ead8e277404578b76 979 Pfam PF00034 Cytochrome c 844 969 7.8E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4167 e53356163981cf1ead8e277404578b76 979 SUPERFAMILY SSF50952 98 159 7.85E-23 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB4167 e53356163981cf1ead8e277404578b76 979 SUPERFAMILY SSF50952 187 389 7.85E-23 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB4167 e53356163981cf1ead8e277404578b76 979 SUPERFAMILY SSF46626 824 908 8.95E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4167 e53356163981cf1ead8e277404578b76 979 SUPERFAMILY SSF46626 944 968 8.95E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4167 e53356163981cf1ead8e277404578b76 979 Pfam PF07995 Glucose / Sorbosone dehydrogenase 61 314 2.2E-28 T 11-11-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 Gene3D G3DSA:1.10.10.10 153 209 2.5E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 SMART SM00448 3 115 3.1E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 SUPERFAMILY SSF52172 3 127 3.56E-30 T 11-11-2016 IPR011006 CheY-like superfamily RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 Pfam PF00072 Response regulator receiver domain 6 116 1.8E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 2.8E-14 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 2.8E-14 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 2.8E-14 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 Gene3D G3DSA:3.40.50.2300 2 152 4.3E-31 T 11-11-2016 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 SUPERFAMILY SSF46894 140 209 3.74E-23 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 SMART SM00421 147 204 3.8E-26 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB2743 e0e5f90ba15314a9ad5add0fe78b4bcf 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 3.9E-21 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB8555 7da49321870f94304ed1f5b94f7c5a5d 513 Gene3D G3DSA:1.10.510.10 209 444 9.2E-49 T 11-11-2016 RB8555 7da49321870f94304ed1f5b94f7c5a5d 513 SMART SM00220 127 384 1.3E-55 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8555 7da49321870f94304ed1f5b94f7c5a5d 513 SUPERFAMILY SSF56112 121 409 7.36E-72 T 11-11-2016 IPR011009 Protein kinase-like domain RB8555 7da49321870f94304ed1f5b94f7c5a5d 513 Gene3D G3DSA:3.30.200.20 124 204 1.8E-19 T 11-11-2016 RB8555 7da49321870f94304ed1f5b94f7c5a5d 513 Pfam PF00069 Protein kinase domain 127 375 5.9E-46 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8555 7da49321870f94304ed1f5b94f7c5a5d 513 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 246 258 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB8555 7da49321870f94304ed1f5b94f7c5a5d 513 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 133 156 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 366 378 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 214 237 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 SUPERFAMILY SSF56112 342 519 3.42E-47 T 11-11-2016 IPR011009 Protein kinase-like domain RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 SUPERFAMILY SSF56112 204 302 3.42E-47 T 11-11-2016 IPR011009 Protein kinase-like domain RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 Gene3D G3DSA:1.10.510.10 365 512 4.8E-26 T 11-11-2016 RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 SMART SM00220 208 527 2.1E-18 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 Gene3D G3DSA:3.30.200.20 205 297 3.4E-20 T 11-11-2016 RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 Gene3D G3DSA:3.30.200.20 341 364 3.4E-20 T 11-11-2016 RB7919 03c4ee2da4bc0a9c7250c41a7f14f850 793 Pfam PF00069 Protein kinase domain 208 510 3.0E-29 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB1434 d660768bebd4f72f507fea4e750abef9 192 Pfam PF13244 Domain of unknown function (DUF4040) 10 74 6.0E-17 T 11-11-2016 IPR025383 Domain of unknown function DUF4040 RB5495 a393cfaddd056f18f797a385ac037638 569 Pfam PF13533 Biotin-lipoyl like 150 197 9.3E-9 T 11-11-2016 RB5495 a393cfaddd056f18f797a385ac037638 569 Gene3D G3DSA:2.40.50.100 151 183 3.7E-10 T 11-11-2016 RB5495 a393cfaddd056f18f797a385ac037638 569 Gene3D G3DSA:2.40.50.100 300 332 3.7E-10 T 11-11-2016 RB5495 a393cfaddd056f18f797a385ac037638 569 Pfam PF13437 HlyD family secretion protein 303 361 3.7E-6 T 11-11-2016 RB5495 a393cfaddd056f18f797a385ac037638 569 SUPERFAMILY SSF111369 137 196 1.06E-8 T 11-11-2016 RB5495 a393cfaddd056f18f797a385ac037638 569 SUPERFAMILY SSF111369 287 352 1.06E-8 T 11-11-2016 RB5495 a393cfaddd056f18f797a385ac037638 569 SUPERFAMILY SSF111369 225 258 1.06E-8 T 11-11-2016 RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 Pfam PF00561 alpha/beta hydrolase fold 64 307 4.1E-29 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 PRINTS PR00412 Epoxide hydrolase signature 265 281 3.3E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 PRINTS PR00412 Epoxide hydrolase signature 150 163 3.3E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 PRINTS PR00412 Epoxide hydrolase signature 297 319 3.3E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 PRINTS PR00412 Epoxide hydrolase signature 70 88 3.3E-9 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 2.6E-8 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 PRINTS PR00111 Alpha/beta hydrolase fold signature 267 281 2.6E-8 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 SUPERFAMILY SSF53474 40 322 1.28E-74 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9565 f5c96eeb88187c4776c1e7cb9ece05cb 327 Gene3D G3DSA:3.40.50.1820 30 323 2.9E-66 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3016 279cdfa98c9783ba608c4aec7e559897 151 SUPERFAMILY SSF117782 40 142 1.27E-31 T 11-11-2016 IPR002765 Uncharacterised protein family UPF0145 RB3016 279cdfa98c9783ba608c4aec7e559897 151 Gene3D G3DSA:3.30.110.70 40 141 1.4E-33 T 11-11-2016 IPR002765 Uncharacterised protein family UPF0145 RB3016 279cdfa98c9783ba608c4aec7e559897 151 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 40 142 22.532 T 11-11-2016 IPR002765 Uncharacterised protein family UPF0145 RB3016 279cdfa98c9783ba608c4aec7e559897 151 Pfam PF01906 Putative heavy-metal-binding 40 141 2.7E-34 T 11-11-2016 IPR002765 Uncharacterised protein family UPF0145 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SMART SM00220 123 412 7.5E-21 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11136 f49978ec0e0c044d6add3d94efe23038 912 Gene3D G3DSA:1.10.510.10 260 415 5.3E-35 T 11-11-2016 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SUPERFAMILY SSF48452 583 667 2.4E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SUPERFAMILY SSF48452 738 775 2.4E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SUPERFAMILY SSF48452 803 864 2.4E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 Pfam PF13374 Tetratricopeptide repeat 737 779 0.0019 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 Pfam PF13374 Tetratricopeptide repeat 633 663 0.0056 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 Pfam PF13374 Tetratricopeptide repeat 582 621 1.5E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 129 152 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB11136 f49978ec0e0c044d6add3d94efe23038 912 Gene3D G3DSA:3.30.200.20 114 259 6.3E-24 T 11-11-2016 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SMART SM00028 535 568 240.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SMART SM00028 634 667 29.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SMART SM00028 834 867 87.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SMART SM00028 738 771 0.52 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SMART SM00028 786 819 17.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SMART SM00028 583 616 0.17 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 Pfam PF00069 Protein kinase domain 126 369 2.1E-31 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB11136 f49978ec0e0c044d6add3d94efe23038 912 SUPERFAMILY SSF56112 117 219 5.53E-60 T 11-11-2016 IPR011009 Protein kinase-like domain RB11136 f49978ec0e0c044d6add3d94efe23038 912 SUPERFAMILY SSF56112 245 408 5.53E-60 T 11-11-2016 IPR011009 Protein kinase-like domain RB11136 f49978ec0e0c044d6add3d94efe23038 912 Gene3D G3DSA:1.25.40.10 533 865 1.9E-28 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 Pfam PF13181 Tetratricopeptide repeat 836 864 0.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB11136 f49978ec0e0c044d6add3d94efe23038 912 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 269 281 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB9611 3d31cd062396f71fe0b7f115f1f1206e 684 Gene3D G3DSA:3.40.50.300 2 226 4.6E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9611 3d31cd062396f71fe0b7f115f1f1206e 684 Pfam PF02687 FtsX-like permease family 564 677 3.1E-17 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB9611 3d31cd062396f71fe0b7f115f1f1206e 684 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB9611 3d31cd062396f71fe0b7f115f1f1206e 684 Pfam PF00005 ABC transporter 21 171 1.0E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9611 3d31cd062396f71fe0b7f115f1f1206e 684 SMART SM00382 30 220 2.6E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9611 3d31cd062396f71fe0b7f115f1f1206e 684 SUPERFAMILY SSF52540 1 224 4.41E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9611 3d31cd062396f71fe0b7f115f1f1206e 684 Pfam PF12704 MacB-like periplasmic core domain 275 525 1.1E-32 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB2642 9c327a122bcea85f28ba049d9ac63078 121 PIRSF PIRSF027377 2 121 6.5E-52 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RB2642 9c327a122bcea85f28ba049d9ac63078 121 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 8 118 6.4E-54 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RB2642 9c327a122bcea85f28ba049d9ac63078 121 Gene3D G3DSA:3.30.1130.10 8 119 2.8E-43 T 11-11-2016 RB2642 9c327a122bcea85f28ba049d9ac63078 121 Pfam PF14489 QueF-like protein 42 120 1.2E-27 T 11-11-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RB2642 9c327a122bcea85f28ba049d9ac63078 121 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 121 42.653 T 11-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RB2642 9c327a122bcea85f28ba049d9ac63078 121 SUPERFAMILY SSF55620 7 114 3.26E-25 T 11-11-2016 RB13140 09267d986d79b38b0031ba655c635325 327 SUPERFAMILY SSF51735 33 194 2.31E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB13140 09267d986d79b38b0031ba655c635325 327 Gene3D G3DSA:3.40.50.720 31 193 5.8E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB13140 09267d986d79b38b0031ba655c635325 327 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 37 50 - T 11-11-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 RB13140 09267d986d79b38b0031ba655c635325 327 SUPERFAMILY SSF48179 194 321 2.27E-35 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB13140 09267d986d79b38b0031ba655c635325 327 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 195 315 1.7E-34 T 11-11-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RB13140 09267d986d79b38b0031ba655c635325 327 Gene3D G3DSA:1.10.1040.10 194 321 3.8E-42 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RB13140 09267d986d79b38b0031ba655c635325 327 PIRSF PIRSF000103 27 322 3.6E-68 T 11-11-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 RB13140 09267d986d79b38b0031ba655c635325 327 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 34 189 1.3E-39 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RB3867 00eb64a732c961eea6e0b2a7db7f3f53 284 SUPERFAMILY SSF56219 31 284 4.19E-29 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB3867 00eb64a732c961eea6e0b2a7db7f3f53 284 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 39 276 3.4E-12 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB3867 00eb64a732c961eea6e0b2a7db7f3f53 284 Gene3D G3DSA:3.60.10.10 24 283 2.2E-14 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB6603 ffb330b4dd60af7ab485bc8d14f0d961 334 SUPERFAMILY SSF52540 15 305 4.45E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6603 ffb330b4dd60af7ab485bc8d14f0d961 334 SMART SM00382 46 190 2.6E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6603 ffb330b4dd60af7ab485bc8d14f0d961 334 PIRSF PIRSF002849 1 333 3.9E-125 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB6603 ffb330b4dd60af7ab485bc8d14f0d961 334 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 182 1.2E-64 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB6603 ffb330b4dd60af7ab485bc8d14f0d961 334 Gene3D G3DSA:1.10.8.300 212 329 3.3E-32 T 11-11-2016 RB6603 ffb330b4dd60af7ab485bc8d14f0d961 334 Gene3D G3DSA:3.40.50.300 31 198 4.0E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7521 cb6155d55f55ef16fa65e30426fdcc72 674 Pfam PF01841 Transglutaminase-like superfamily 514 626 4.6E-11 T 11-11-2016 IPR002931 Transglutaminase-like RB7521 cb6155d55f55ef16fa65e30426fdcc72 674 SUPERFAMILY SSF54001 500 577 4.63E-17 T 11-11-2016 RB7521 cb6155d55f55ef16fa65e30426fdcc72 674 SUPERFAMILY SSF54001 608 647 4.63E-17 T 11-11-2016 RB7521 cb6155d55f55ef16fa65e30426fdcc72 674 SMART SM00460 545 628 0.0013 T 11-11-2016 IPR002931 Transglutaminase-like RB4513 602bcdac1f40da0dbbbc807ec65a65e3 326 PIRSF PIRSF035875 9 319 5.4E-58 T 11-11-2016 IPR017039 Virulence factor BrkB RB4513 602bcdac1f40da0dbbbc807ec65a65e3 326 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 295 3.3E-27 T 11-11-2016 IPR017039 Virulence factor BrkB RB4513 602bcdac1f40da0dbbbc807ec65a65e3 326 Pfam PF03631 Virulence factor BrkB 31 297 2.7E-57 T 11-11-2016 IPR017039 Virulence factor BrkB RB2754 48a70a44632efde46283da470ee2776c 229 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 11-11-2016 IPR000150 Cof protein GO:0016787 RB2754 48a70a44632efde46283da470ee2776c 229 SUPERFAMILY SSF56784 2 214 3.74E-35 T 11-11-2016 IPR023214 HAD-like domain RB2754 48a70a44632efde46283da470ee2776c 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 189 1.4E-14 T 11-11-2016 IPR023214 HAD-like domain RB2754 48a70a44632efde46283da470ee2776c 229 Gene3D G3DSA:3.40.50.1000 69 219 1.7E-27 T 11-11-2016 IPR023214 HAD-like domain RB2754 48a70a44632efde46283da470ee2776c 229 Gene3D G3DSA:1.10.150.240 20 61 2.9E-4 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Gene3D G3DSA:3.90.740.10 283 329 6.3E-42 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Gene3D G3DSA:3.90.740.10 365 483 6.3E-42 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 949 22.287 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 SUPERFAMILY SSF50677 295 482 2.93E-49 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 SUPERFAMILY SSF52374 184 261 6.5E-120 T 11-11-2016 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 SUPERFAMILY SSF52374 483 761 6.5E-120 T 11-11-2016 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 SUPERFAMILY SSF52374 3 147 6.5E-120 T 11-11-2016 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Pfam PF08264 Anticodon-binding domain of tRNA 798 911 7.5E-21 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 146 2.1E-9 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 710 744 1.6E-6 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Gene3D G3DSA:3.40.50.620 484 650 2.7E-139 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Gene3D G3DSA:3.40.50.620 183 261 2.7E-139 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Gene3D G3DSA:3.40.50.620 3 146 2.7E-139 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Gene3D G3DSA:3.40.50.620 717 746 2.7E-139 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8919 bde6ff28dda85019333e038bd46c9dcf 950 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 182 950 9.6E-232 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 257 469 6.0E-58 T 11-11-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 Gene3D G3DSA:1.10.730.10 747 885 1.7E-41 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 SUPERFAMILY SSF47323 760 950 1.87E-36 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 250 269 7.5E-51 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 634 644 7.5E-51 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 601 623 7.5E-51 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 221 234 7.5E-51 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 562 580 7.5E-51 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.5E-51 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8919 bde6ff28dda85019333e038bd46c9dcf 950 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 205 7.5E-51 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RB8522 711fe7c337e58ff28ab1c88f0559f151 302 SUPERFAMILY SSF55315 37 125 9.42E-12 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like RB8522 711fe7c337e58ff28ab1c88f0559f151 302 Pfam PF00588 SpoU rRNA Methylase family 145 289 2.2E-29 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RB8522 711fe7c337e58ff28ab1c88f0559f151 302 Gene3D G3DSA:3.30.1330.30 37 124 4.1E-6 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like RB8522 711fe7c337e58ff28ab1c88f0559f151 302 Gene3D G3DSA:3.40.1280.10 141 294 2.4E-40 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RB8522 711fe7c337e58ff28ab1c88f0559f151 302 SUPERFAMILY SSF75217 135 294 3.6E-34 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases RB2960 327c9b449d786d6b4c33419e627363f0 489 SUPERFAMILY SSF50998 82 478 1.44E-47 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB2960 327c9b449d786d6b4c33419e627363f0 489 Pfam PF13360 PQQ-like domain 356 436 1.1E-5 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB2960 327c9b449d786d6b4c33419e627363f0 489 Pfam PF13360 PQQ-like domain 114 255 4.6E-11 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB2960 327c9b449d786d6b4c33419e627363f0 489 Gene3D G3DSA:2.140.10.10 55 485 3.9E-43 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB2960 327c9b449d786d6b4c33419e627363f0 489 SMART SM00564 374 410 24.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB2960 327c9b449d786d6b4c33419e627363f0 489 SMART SM00564 222 256 2.9 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB3596 15ecf084453df335b0a6250fae4f91d1 144 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 122 1.4E-29 T 11-11-2016 RB3596 15ecf084453df335b0a6250fae4f91d1 144 Pfam PF01592 NifU-like N terminal domain 8 123 8.6E-26 T 11-11-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 RB3596 15ecf084453df335b0a6250fae4f91d1 144 SUPERFAMILY SSF82649 6 130 1.05E-38 T 11-11-2016 RB3596 15ecf084453df335b0a6250fae4f91d1 144 Gene3D G3DSA:3.90.1010.10 7 124 4.4E-35 T 11-11-2016 RB10991 b90e8bf4a389d2d0be47d9a052b182d6 158 SUPERFAMILY SSF46785 19 155 2.48E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10991 b90e8bf4a389d2d0be47d9a052b182d6 158 Pfam PF01047 MarR family 66 106 1.7E-7 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB10991 b90e8bf4a389d2d0be47d9a052b182d6 158 ProSitePatterns PS01117 MarR-type HTH domain signature. 81 115 - T 11-11-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RB10991 b90e8bf4a389d2d0be47d9a052b182d6 158 Gene3D G3DSA:1.10.10.10 12 155 1.0E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10991 b90e8bf4a389d2d0be47d9a052b182d6 158 SMART SM00347 41 142 3.2E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB10991 b90e8bf4a389d2d0be47d9a052b182d6 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 5.6E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB10991 b90e8bf4a389d2d0be47d9a052b182d6 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 5.6E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB10991 b90e8bf4a389d2d0be47d9a052b182d6 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 152 5.6E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB3266 13efef3abe852dbb2f40ec5447fbf0bf 321 SUPERFAMILY SSF55174 15 105 1.37E-11 T 11-11-2016 RB3266 13efef3abe852dbb2f40ec5447fbf0bf 321 Pfam PF01479 S4 domain 17 62 1.4E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB3266 13efef3abe852dbb2f40ec5447fbf0bf 321 Pfam PF00849 RNA pseudouridylate synthase 92 251 6.9E-29 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB3266 13efef3abe852dbb2f40ec5447fbf0bf 321 SUPERFAMILY SSF55120 82 310 1.7E-53 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB3266 13efef3abe852dbb2f40ec5447fbf0bf 321 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB3266 13efef3abe852dbb2f40ec5447fbf0bf 321 SMART SM00363 16 80 4.2E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB3266 13efef3abe852dbb2f40ec5447fbf0bf 321 Gene3D G3DSA:3.10.290.10 16 109 1.3E-12 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PIRSF PIRSF000099 9 460 5.6E-178 T 11-11-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 65 458 5.2E-151 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 15 459 37.709 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 Pfam PF00815 Histidinol dehydrogenase 63 458 9.8E-146 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 SUPERFAMILY SSF53720 61 459 8.63E-73 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 262 294 - T 11-11-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PRINTS PR00083 Histidinol dehydrogenase signature 393 411 1.6E-81 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PRINTS PR00083 Histidinol dehydrogenase signature 203 229 1.6E-81 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PRINTS PR00083 Histidinol dehydrogenase signature 65 89 1.6E-81 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PRINTS PR00083 Histidinol dehydrogenase signature 352 377 1.6E-81 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PRINTS PR00083 Histidinol dehydrogenase signature 284 303 1.6E-81 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PRINTS PR00083 Histidinol dehydrogenase signature 233 258 1.6E-81 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 1.6E-81 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 PRINTS PR00083 Histidinol dehydrogenase signature 262 283 1.6E-81 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 Gene3D G3DSA:3.40.50.1980 257 405 3.4E-58 T 11-11-2016 RB1584 b0ae5b13d6865e751bded087c85fda9f 460 Gene3D G3DSA:3.40.50.1980 63 256 1.0E-67 T 11-11-2016 RB5973 8053fd07c237715e3dfd39a8588bf44b 377 SUPERFAMILY SSF53822 89 375 1.3E-72 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB5973 8053fd07c237715e3dfd39a8588bf44b 377 Pfam PF13407 Periplasmic binding protein domain 91 349 2.9E-54 T 11-11-2016 IPR025997 Periplasmic binding protein RB5973 8053fd07c237715e3dfd39a8588bf44b 377 Gene3D G3DSA:3.40.50.2300 89 216 6.7E-39 T 11-11-2016 RB5973 8053fd07c237715e3dfd39a8588bf44b 377 Gene3D G3DSA:3.40.50.2300 217 375 9.2E-46 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00096 Glutamine amidotransferase superfamily signature 92 103 1.3E-12 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00096 Glutamine amidotransferase superfamily signature 65 74 1.3E-12 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00096 Glutamine amidotransferase superfamily signature 183 196 1.3E-12 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 92 108 7.1E-7 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 62 76 7.1E-7 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 Pfam PF00117 Glutamine amidotransferase class-I 4 203 7.6E-41 T 11-11-2016 IPR017926 Glutamine amidotransferase RB3936 906f571967c70fb1721278f06fb90d86 244 Gene3D G3DSA:3.40.50.880 2 208 5.6E-54 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB3936 906f571967c70fb1721278f06fb90d86 244 SUPERFAMILY SSF52317 2 211 6.35E-42 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00097 Anthranilate synthase component II signature 136 148 6.4E-16 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00097 Anthranilate synthase component II signature 116 124 6.4E-16 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.4E-16 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 PRINTS PR00097 Anthranilate synthase component II signature 183 196 6.4E-16 T 11-11-2016 RB3936 906f571967c70fb1721278f06fb90d86 244 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 204 9.7E-52 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB1731 6c5b06ee8893b1fbc900612c3ef97120 287 SUPERFAMILY SSF48403 214 285 3.07E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB1731 6c5b06ee8893b1fbc900612c3ef97120 287 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 15 154 3.0E-54 T 11-11-2016 IPR018756 Domain of unknown function DUF2314 RB1731 6c5b06ee8893b1fbc900612c3ef97120 287 Gene3D G3DSA:1.25.40.20 213 285 2.9E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB1535 665ef9fa136fae7036ae0317ab8959d1 439 SUPERFAMILY SSF51182 49 380 2.89E-47 T 11-11-2016 IPR011051 RmlC-like cupin domain RB1535 665ef9fa136fae7036ae0317ab8959d1 439 Gene3D G3DSA:2.60.120.10 52 267 9.2E-35 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB12434 e15c0584c83deb1db37bec958679a1c4 680 Pfam PF13431 Tetratricopeptide repeat 433 462 1.3E-4 T 11-11-2016 RB12434 e15c0584c83deb1db37bec958679a1c4 680 Pfam PF13424 Tetratricopeptide repeat 480 541 1.9E-9 T 11-11-2016 RB12434 e15c0584c83deb1db37bec958679a1c4 680 Pfam PF13424 Tetratricopeptide repeat 613 676 2.1E-11 T 11-11-2016 RB12434 e15c0584c83deb1db37bec958679a1c4 680 Gene3D G3DSA:1.25.40.10 431 502 3.4E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SUPERFAMILY SSF48452 431 518 3.79E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SMART SM00028 476 509 0.0033 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SMART SM00028 646 679 0.0045 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SMART SM00028 510 543 2.3E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SMART SM00028 544 577 3.2E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SMART SM00028 578 611 20.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SMART SM00028 442 475 1.5E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SMART SM00028 612 645 8.1E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 SUPERFAMILY SSF48452 489 678 1.58E-38 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 90 229 3.8E-9 T 11-11-2016 RB12434 e15c0584c83deb1db37bec958679a1c4 680 Gene3D G3DSA:1.25.40.10 578 679 4.2E-26 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 Pfam PF13181 Tetratricopeptide repeat 544 576 1.2E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB12434 e15c0584c83deb1db37bec958679a1c4 680 Gene3D G3DSA:1.25.40.10 503 577 1.4E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4293 3ed9fbe0e68a998c2c7bde88d7d7dad6 504 PRINTS PR00457 Animal haem peroxidase signature 94 109 2.7E-8 T 11-11-2016 IPR019791 Haem peroxidase, animal RB4293 3ed9fbe0e68a998c2c7bde88d7d7dad6 504 PRINTS PR00457 Animal haem peroxidase signature 229 255 2.7E-8 T 11-11-2016 IPR019791 Haem peroxidase, animal RB4293 3ed9fbe0e68a998c2c7bde88d7d7dad6 504 PRINTS PR00457 Animal haem peroxidase signature 287 297 2.7E-8 T 11-11-2016 IPR019791 Haem peroxidase, animal RB4293 3ed9fbe0e68a998c2c7bde88d7d7dad6 504 Pfam PF03098 Animal haem peroxidase 119 305 8.5E-20 T 11-11-2016 IPR019791 Haem peroxidase, animal RB4293 3ed9fbe0e68a998c2c7bde88d7d7dad6 504 SUPERFAMILY SSF48113 63 501 4.0E-66 T 11-11-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RB4293 3ed9fbe0e68a998c2c7bde88d7d7dad6 504 Gene3D G3DSA:1.10.640.10 95 460 1.7E-43 T 11-11-2016 IPR019791 Haem peroxidase, animal RB3938 02718d6da60b1d6c87e81df467ccd407 195 Pfam PF04289 Protein of unknown function (DUF447) 4 186 2.0E-49 T 11-11-2016 IPR007386 Protein of unknown function DUF447 RB3938 02718d6da60b1d6c87e81df467ccd407 195 SUPERFAMILY SSF50475 1 188 3.43E-44 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB3938 02718d6da60b1d6c87e81df467ccd407 195 Gene3D G3DSA:2.30.110.10 1 131 3.2E-33 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB3938 02718d6da60b1d6c87e81df467ccd407 195 Gene3D G3DSA:1.20.58.290 132 195 1.9E-45 T 11-11-2016 RB5603 f7842709dd8cea82ad66519f18045a67 299 Gene3D G3DSA:3.40.190.10 20 159 1.1E-42 T 11-11-2016 RB5603 f7842709dd8cea82ad66519f18045a67 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 208 298 6.3E-31 T 11-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RB5603 f7842709dd8cea82ad66519f18045a67 299 Gene3D G3DSA:3.30.70.120 227 298 4.4E-25 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RB5603 f7842709dd8cea82ad66519f18045a67 299 SUPERFAMILY SSF54913 227 298 1.09E-20 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RB5603 f7842709dd8cea82ad66519f18045a67 299 SUPERFAMILY SSF53850 19 224 6.79E-61 T 11-11-2016 RB5603 f7842709dd8cea82ad66519f18045a67 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 20 201 2.6E-61 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RB5603 f7842709dd8cea82ad66519f18045a67 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 19 299 33.337 T 11-11-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 RB5603 f7842709dd8cea82ad66519f18045a67 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 160 181 - T 11-11-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 RB5603 f7842709dd8cea82ad66519f18045a67 299 Pfam PF08029 HisG, C-terminal domain 224 296 2.7E-25 T 11-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RB5603 f7842709dd8cea82ad66519f18045a67 299 Pfam PF01634 ATP phosphoribosyltransferase 67 220 2.0E-47 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RB10727 752094e6f1e1988ce7837ca9696ae159 276 SUPERFAMILY SSF47240 1 267 1.28E-82 T 11-11-2016 IPR009078 Ferritin-like superfamily RB10727 752094e6f1e1988ce7837ca9696ae159 276 Pfam PF05067 Manganese containing catalase 1 262 1.6E-79 T 11-11-2016 IPR007760 Manganese catalase RB10727 752094e6f1e1988ce7837ca9696ae159 276 Gene3D G3DSA:1.20.1260.10 1 195 2.7E-74 T 11-11-2016 IPR012347 Ferritin-related RB10727 752094e6f1e1988ce7837ca9696ae159 276 Gene3D G3DSA:3.30.1530.10 206 266 2.6E-6 T 11-11-2016 IPR027407 Manganese catalase, domain 2 RB2976 8dc2402821451572d4a6f1450ac9ae58 196 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 194 6.5E-56 T 11-11-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RB2976 8dc2402821451572d4a6f1450ac9ae58 196 SUPERFAMILY SSF89028 1 194 1.14E-59 T 11-11-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RB2976 8dc2402821451572d4a6f1450ac9ae58 196 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 195 5.0E-105 T 11-11-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RB2976 8dc2402821451572d4a6f1450ac9ae58 196 Pfam PF01923 Cobalamin adenosyltransferase 3 181 1.5E-58 T 11-11-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RB2976 8dc2402821451572d4a6f1450ac9ae58 196 Gene3D G3DSA:1.20.1200.10 12 195 7.2E-60 T 11-11-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RB9920 cdbdbd01958ae2491436d9c37a1dfd38 140 SUPERFAMILY SSF54995 4 102 3.79E-23 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB9920 cdbdbd01958ae2491436d9c37a1dfd38 140 Pfam PF01250 Ribosomal protein S6 7 95 2.2E-19 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB9920 cdbdbd01958ae2491436d9c37a1dfd38 140 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 4 98 15.803 T 11-11-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RB9920 cdbdbd01958ae2491436d9c37a1dfd38 140 Gene3D G3DSA:3.30.70.60 5 102 2.5E-23 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RB9920 cdbdbd01958ae2491436d9c37a1dfd38 140 TIGRFAM TIGR00166 S6: ribosomal protein bS6 5 97 1.3E-18 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB5043 f1675d5b40b1558f3ffc3cfcbf8fce10 611 Pfam PF03616 Sodium/glutamate symporter 113 295 1.0E-8 T 11-11-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 RB3371 b2a90f4feb26dfe8dfcfadf93c1c8c86 459 Pfam PF04072 Leucine carboxyl methyltransferase 239 371 2.1E-29 T 11-11-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 RB3371 b2a90f4feb26dfe8dfcfadf93c1c8c86 459 SUPERFAMILY SSF54637 23 175 4.27E-18 T 11-11-2016 IPR029069 HotDog domain RB3371 b2a90f4feb26dfe8dfcfadf93c1c8c86 459 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 26 174 4.4E-7 T 11-11-2016 IPR012660 Thioesterase, putative RB3371 b2a90f4feb26dfe8dfcfadf93c1c8c86 459 SUPERFAMILY SSF53335 232 440 1.16E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB3371 b2a90f4feb26dfe8dfcfadf93c1c8c86 459 Gene3D G3DSA:3.40.50.150 244 386 3.7E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB3371 b2a90f4feb26dfe8dfcfadf93c1c8c86 459 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 239 393 8.0E-29 T 11-11-2016 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 RB3371 b2a90f4feb26dfe8dfcfadf93c1c8c86 459 Gene3D G3DSA:3.10.129.10 22 175 3.3E-24 T 11-11-2016 IPR029069 HotDog domain RB10322 cb9edb15bb01048d30238e097c682fab 459 Gene3D G3DSA:1.10.287.130 231 294 5.3E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10322 cb9edb15bb01048d30238e097c682fab 459 SUPERFAMILY SSF55785 116 224 4.99E-8 T 11-11-2016 IPR000014 PAS domain RB10322 cb9edb15bb01048d30238e097c682fab 459 Gene3D G3DSA:3.30.565.10 301 456 1.5E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10322 cb9edb15bb01048d30238e097c682fab 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 456 1.1E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10322 cb9edb15bb01048d30238e097c682fab 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 2.0E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10322 cb9edb15bb01048d30238e097c682fab 459 SMART SM00387 342 457 6.2E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10322 cb9edb15bb01048d30238e097c682fab 459 Gene3D G3DSA:3.30.450.20 105 213 4.5E-11 T 11-11-2016 RB10322 cb9edb15bb01048d30238e097c682fab 459 SUPERFAMILY SSF55874 284 455 8.25E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB10322 cb9edb15bb01048d30238e097c682fab 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 5.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10322 cb9edb15bb01048d30238e097c682fab 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 5.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10322 cb9edb15bb01048d30238e097c682fab 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 5.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB10322 cb9edb15bb01048d30238e097c682fab 459 Pfam PF08448 PAS fold 111 216 4.3E-8 T 11-11-2016 IPR013656 PAS fold-4 RB10322 cb9edb15bb01048d30238e097c682fab 459 SMART SM00388 230 299 2.7E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10322 cb9edb15bb01048d30238e097c682fab 459 SUPERFAMILY SSF47384 217 295 3.14E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10322 cb9edb15bb01048d30238e097c682fab 459 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 110 222 9.4E-6 T 11-11-2016 IPR000014 PAS domain RB11876 7d798a6a33e587932a754280ce92441d 913 Gene3D G3DSA:3.40.30.10 764 850 2.4E-11 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11876 7d798a6a33e587932a754280ce92441d 913 Pfam PF11412 Disulphide bond corrector protein DsbC 256 378 4.5E-7 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RB11876 7d798a6a33e587932a754280ce92441d 913 Pfam PF11412 Disulphide bond corrector protein DsbC 82 208 5.7E-7 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RB11876 7d798a6a33e587932a754280ce92441d 913 Pfam PF13899 Thioredoxin-like 766 850 1.7E-10 T 11-11-2016 RB11876 7d798a6a33e587932a754280ce92441d 913 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 487 678 5.0E-10 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RB11876 7d798a6a33e587932a754280ce92441d 913 SUPERFAMILY SSF52833 764 875 3.07E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6114 c7a8377489664b91e3198010bec76eb5 690 SUPERFAMILY SSF63418 154 231 5.75E-7 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RB6114 c7a8377489664b91e3198010bec76eb5 690 SUPERFAMILY SSF53623 208 471 5.34E-21 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB6114 c7a8377489664b91e3198010bec76eb5 690 Pfam PF08245 Mur ligase middle domain 243 438 2.9E-7 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB6114 c7a8377489664b91e3198010bec76eb5 690 Gene3D G3DSA:3.90.190.20 466 620 1.7E-25 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RB6114 c7a8377489664b91e3198010bec76eb5 690 SUPERFAMILY SSF53244 460 619 3.89E-12 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RB6114 c7a8377489664b91e3198010bec76eb5 690 Gene3D G3DSA:3.40.1190.10 234 465 4.6E-20 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB6489 6a4f5d6fa852ea1b7cb2b017db9e0267 391 SUPERFAMILY SSF51419 39 217 7.2E-30 T 11-11-2016 IPR029066 PLP-binding barrel RB6489 6a4f5d6fa852ea1b7cb2b017db9e0267 391 Gene3D G3DSA:3.20.20.10 40 212 2.5E-20 T 11-11-2016 IPR029066 PLP-binding barrel RB6489 6a4f5d6fa852ea1b7cb2b017db9e0267 391 Pfam PF01168 Alanine racemase, N-terminal domain 39 212 7.0E-20 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RB6489 6a4f5d6fa852ea1b7cb2b017db9e0267 391 Pfam PF14031 Putative serine dehydratase domain 282 370 7.6E-17 T 11-11-2016 IPR026956 D-serine dehydratase-like domain RB6489 6a4f5d6fa852ea1b7cb2b017db9e0267 391 SMART SM01119 282 372 1.4E-29 T 11-11-2016 IPR026956 D-serine dehydratase-like domain RB9047 ae8aa52ba97f37aa5b7b613382bbdff5 549 Pfam PF07585 Putative beta barrel porin-7 (BBP7) 191 549 4.1E-135 T 11-11-2016 IPR011446 Putative beta barrel porin-7 RB4336 f4926b2529071657139a0c61b01d68a3 372 SUPERFAMILY SSF53756 68 313 2.61E-10 T 11-11-2016 RB4336 f4926b2529071657139a0c61b01d68a3 372 Gene3D G3DSA:3.40.50.2000 188 311 9.0E-10 T 11-11-2016 RB9445 3a625febc3d2bec0ae2a7e25f70fbe86 249 Pfam PF01925 Sulfite exporter TauE/SafE 17 245 1.5E-20 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RB11225 c1b47905f041c4d4e76cd212ede5391b 181 Pfam PF00581 Rhodanese-like domain 5 99 7.1E-16 T 11-11-2016 IPR001763 Rhodanese-like domain RB11225 c1b47905f041c4d4e76cd212ede5391b 181 Pfam PF11127 Protein of unknown function (DUF2892) 112 174 8.5E-12 T 11-11-2016 IPR021309 Protein of unknown function DUF2892 RB11225 c1b47905f041c4d4e76cd212ede5391b 181 Gene3D G3DSA:3.40.250.10 2 105 1.6E-27 T 11-11-2016 IPR001763 Rhodanese-like domain RB11225 c1b47905f041c4d4e76cd212ede5391b 181 SUPERFAMILY SSF52821 2 154 7.6E-30 T 11-11-2016 IPR001763 Rhodanese-like domain RB11225 c1b47905f041c4d4e76cd212ede5391b 181 SMART SM00450 4 103 3.8E-21 T 11-11-2016 IPR001763 Rhodanese-like domain RB8785 4186a3b5a81e9dcee79ebca82e07b74a 542 Gene3D G3DSA:3.20.14.10 355 522 1.5E-26 T 11-11-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RB8785 4186a3b5a81e9dcee79ebca82e07b74a 542 SUPERFAMILY SSF53743 13 146 1.22E-54 T 11-11-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 RB8785 4186a3b5a81e9dcee79ebca82e07b74a 542 SUPERFAMILY SSF53743 179 363 1.22E-54 T 11-11-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 RB5500 c3015e92fc9ffd008b1c0eb7e87dcc52 246 Gene3D G3DSA:1.10.10.200 1 80 3.8E-35 T 11-11-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RB5500 c3015e92fc9ffd008b1c0eb7e87dcc52 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.5E-88 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB5500 c3015e92fc9ffd008b1c0eb7e87dcc52 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 33.099 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB5500 c3015e92fc9ffd008b1c0eb7e87dcc52 246 SUPERFAMILY SSF75625 3 243 3.01E-88 T 11-11-2016 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB5500 c3015e92fc9ffd008b1c0eb7e87dcc52 246 Gene3D G3DSA:3.30.70.980 135 205 9.8E-22 T 11-11-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB5500 c3015e92fc9ffd008b1c0eb7e87dcc52 246 Gene3D G3DSA:3.30.1270.10 83 134 1.2E-31 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB5500 c3015e92fc9ffd008b1c0eb7e87dcc52 246 Gene3D G3DSA:3.30.1270.10 212 243 1.2E-31 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB5500 c3015e92fc9ffd008b1c0eb7e87dcc52 246 Pfam PF01709 Transcriptional regulator 5 237 1.9E-84 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4393 4e0a1a63a7fa305223d451bce60d7a45 73 Pfam PF07640 QPP 1 34 6.5E-19 T 11-11-2016 IPR011507 QPP RB12351 738ddb53727d6916ce4207e429b38749 1321 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 433 635 1.1E-39 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB12351 738ddb53727d6916ce4207e429b38749 1321 Gene3D G3DSA:2.60.120.260 1219 1299 1.1E-6 T 11-11-2016 IPR008979 Galactose-binding domain-like RB12351 738ddb53727d6916ce4207e429b38749 1321 SUPERFAMILY SSF46626 1022 1083 4.8E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12351 738ddb53727d6916ce4207e429b38749 1321 SUPERFAMILY SSF46626 1136 1158 4.8E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12351 738ddb53727d6916ce4207e429b38749 1321 SUPERFAMILY SSF50952 420 696 7.32E-14 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB12351 738ddb53727d6916ce4207e429b38749 1321 SUPERFAMILY SSF50952 727 758 7.32E-14 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB12351 738ddb53727d6916ce4207e429b38749 1321 Gene3D G3DSA:2.120.10.30 595 662 1.2E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB12351 738ddb53727d6916ce4207e429b38749 1321 Gene3D G3DSA:2.120.10.30 725 774 1.2E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB12351 738ddb53727d6916ce4207e429b38749 1321 Pfam PF00034 Cytochrome c 1030 1077 1.8E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12351 738ddb53727d6916ce4207e429b38749 1321 Gene3D G3DSA:1.10.760.10 1124 1158 5.4E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12351 738ddb53727d6916ce4207e429b38749 1321 Gene3D G3DSA:1.10.760.10 1024 1088 5.4E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12351 738ddb53727d6916ce4207e429b38749 1321 Gene3D G3DSA:3.40.50.1110 105 303 2.4E-15 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB12351 738ddb53727d6916ce4207e429b38749 1321 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1028 1158 5.5E-30 T 11-11-2016 IPR013427 Haem-binding domain, putative RB12351 738ddb53727d6916ce4207e429b38749 1321 Gene3D G3DSA:2.120.10.30 446 544 1.4E-5 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB12351 738ddb53727d6916ce4207e429b38749 1321 SUPERFAMILY SSF49785 1228 1298 5.1E-6 T 11-11-2016 IPR008979 Galactose-binding domain-like RB12351 738ddb53727d6916ce4207e429b38749 1321 SUPERFAMILY SSF52266 104 303 5.27E-14 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB12351 738ddb53727d6916ce4207e429b38749 1321 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 129 293 1.8E-7 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB11856 0d1dfc443dd708ce2ea5224588c135c0 644 Pfam PF00474 Sodium:solute symporter family 37 202 5.7E-36 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB11856 0d1dfc443dd708ce2ea5224588c135c0 644 Pfam PF00474 Sodium:solute symporter family 390 584 1.1E-31 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB4997 c80f8362fba628fa56da3ac32c21908c 514 TIGRFAM TIGR00767 rho: transcription termination factor Rho 95 510 5.5E-178 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RB4997 c80f8362fba628fa56da3ac32c21908c 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 249 457 2.3E-22 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4997 c80f8362fba628fa56da3ac32c21908c 514 SMART SM00357 145 211 9.8E-15 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 RB4997 c80f8362fba628fa56da3ac32c21908c 514 SUPERFAMILY SSF68912 94 139 9.81E-7 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RB4997 c80f8362fba628fa56da3ac32c21908c 514 Gene3D G3DSA:2.40.50.140 95 217 1.5E-43 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB4997 c80f8362fba628fa56da3ac32c21908c 514 SMART SM00382 260 443 2.6E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB4997 c80f8362fba628fa56da3ac32c21908c 514 Gene3D G3DSA:3.40.50.300 224 508 1.3E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4997 c80f8362fba628fa56da3ac32c21908c 514 SUPERFAMILY SSF50249 142 217 3.31E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB4997 c80f8362fba628fa56da3ac32c21908c 514 Pfam PF07497 Rho termination factor, RNA-binding domain 145 217 4.7E-29 T 11-11-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RB4997 c80f8362fba628fa56da3ac32c21908c 514 SUPERFAMILY SSF52540 183 465 1.75E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4997 c80f8362fba628fa56da3ac32c21908c 514 Hamap MF_01884 Transcription termination factor Rho [rho]. 94 513 187.75 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RB4997 c80f8362fba628fa56da3ac32c21908c 514 SMART SM00959 98 140 7.7E-8 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RB2550 b4cb71b3062895ec17c4d3b303ec1447 154 Pfam PF00072 Response regulator receiver domain 20 129 1.5E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2550 b4cb71b3062895ec17c4d3b303ec1447 154 SMART SM00448 17 138 1.5E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB2550 b4cb71b3062895ec17c4d3b303ec1447 154 SUPERFAMILY SSF52172 16 133 2.56E-19 T 11-11-2016 IPR011006 CheY-like superfamily RB2550 b4cb71b3062895ec17c4d3b303ec1447 154 Gene3D G3DSA:3.40.50.2300 15 136 1.7E-21 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 17 206 7.1E-72 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 92 103 7.3E-12 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 65 74 7.3E-12 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00096 Glutamine amidotransferase superfamily signature 185 198 7.3E-12 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 92 108 9.3E-6 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 62 76 9.3E-6 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 SUPERFAMILY SSF52317 16 208 8.02E-49 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 Gene3D G3DSA:3.40.50.880 17 207 1.6E-59 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 Pfam PF00117 Glutamine amidotransferase class-I 19 206 3.4E-45 T 11-11-2016 IPR017926 Glutamine amidotransferase RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00097 Anthranilate synthase component II signature 65 74 3.8E-34 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00097 Anthranilate synthase component II signature 117 125 3.8E-34 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00097 Anthranilate synthase component II signature 92 103 3.8E-34 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00097 Anthranilate synthase component II signature 185 198 3.8E-34 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00097 Anthranilate synthase component II signature 18 32 3.8E-34 T 11-11-2016 RB6300 89942f8afced0c7d736bdbaabe8cb1d4 208 PRINTS PR00097 Anthranilate synthase component II signature 137 149 3.8E-34 T 11-11-2016 RB11959 eb37d874ef8d0fd06331bceb280b8309 280 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 8 276 4.5E-74 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB11959 eb37d874ef8d0fd06331bceb280b8309 280 SUPERFAMILY SSF51735 7 134 1.66E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11959 eb37d874ef8d0fd06331bceb280b8309 280 SUPERFAMILY SSF51735 245 278 1.66E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11959 eb37d874ef8d0fd06331bceb280b8309 280 Gene3D G3DSA:3.40.50.720 7 174 4.8E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11959 eb37d874ef8d0fd06331bceb280b8309 280 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 8 133 1.7E-31 T 11-11-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB11959 eb37d874ef8d0fd06331bceb280b8309 280 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 8 276 29.415 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB11959 eb37d874ef8d0fd06331bceb280b8309 280 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 137 275 2.4E-36 T 11-11-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB11959 eb37d874ef8d0fd06331bceb280b8309 280 SUPERFAMILY SSF55347 135 245 5.67E-26 T 11-11-2016 RB11959 eb37d874ef8d0fd06331bceb280b8309 280 PIRSF PIRSF000161 6 279 6.2E-84 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB11959 eb37d874ef8d0fd06331bceb280b8309 280 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 161 178 - T 11-11-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB8988 2594143f2e6037c5c814a43b95cfbd6f 303 Pfam PF01882 Protein of unknown function DUF58 47 131 5.0E-22 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB8988 2594143f2e6037c5c814a43b95cfbd6f 303 SUPERFAMILY SSF53300 84 229 3.44E-16 T 11-11-2016 IPR002035 von Willebrand factor, type A RB3185 57efaf6a70cd5ac647ff5532803844be 1302 SUPERFAMILY SSF82866 1057 1233 1.44E-23 T 11-11-2016 RB3185 57efaf6a70cd5ac647ff5532803844be 1302 Gene3D G3DSA:1.20.1640.10 1039 1230 1.4E-25 T 11-11-2016 RB3185 57efaf6a70cd5ac647ff5532803844be 1302 Gene3D G3DSA:1.20.1640.10 448 609 2.5E-20 T 11-11-2016 RB3185 57efaf6a70cd5ac647ff5532803844be 1302 Pfam PF03176 MMPL family 1118 1242 4.4E-7 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB3185 57efaf6a70cd5ac647ff5532803844be 1302 Pfam PF03176 MMPL family 445 655 4.1E-9 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB3185 57efaf6a70cd5ac647ff5532803844be 1302 SUPERFAMILY SSF82866 443 600 4.58E-20 T 11-11-2016 RB11217 4da8ac962fe44def306ca0e272479950 354 Pfam PF03747 ADP-ribosylglycohydrolase 8 284 5.3E-59 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 RB11217 4da8ac962fe44def306ca0e272479950 354 SUPERFAMILY SSF101478 6 309 5.36E-64 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 RB5031 190f38f2810ee21c048c88f7a02b3e17 263 Pfam PF06439 Domain of Unknown Function (DUF1080) 51 260 1.2E-38 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB10459 bc0430dfaf08a72a585152f8f84c204b 485 Gene3D G3DSA:3.90.660.20 253 435 8.2E-46 T 11-11-2016 IPR027418 Protoporphyrinogen oxidase, C-terminal domain KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RB10459 bc0430dfaf08a72a585152f8f84c204b 485 SUPERFAMILY SSF51905 452 484 1.68E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10459 bc0430dfaf08a72a585152f8f84c204b 485 SUPERFAMILY SSF51905 1 337 1.68E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10459 bc0430dfaf08a72a585152f8f84c204b 485 Pfam PF01593 Flavin containing amine oxidoreductase 10 484 9.7E-53 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB10459 bc0430dfaf08a72a585152f8f84c204b 485 Gene3D G3DSA:1.10.3110.10 118 215 3.1E-27 T 11-11-2016 RB10459 bc0430dfaf08a72a585152f8f84c204b 485 Gene3D G3DSA:3.40.50.720 2 49 3.0E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10459 bc0430dfaf08a72a585152f8f84c204b 485 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 2 485 1.7E-80 T 11-11-2016 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RB10459 bc0430dfaf08a72a585152f8f84c204b 485 SUPERFAMILY SSF54373 321 435 6.28E-26 T 11-11-2016 RB8747 271efcb0e5f38089cc598988d33350f6 218 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 9 184 1.3E-56 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RB8747 271efcb0e5f38089cc598988d33350f6 218 SUPERFAMILY SSF102645 8 214 2.75E-64 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RB8747 271efcb0e5f38089cc598988d33350f6 218 Gene3D G3DSA:3.40.50.10300 8 215 5.9E-67 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RB9431 725e07164498d01b0bfec25240635117 239 SUPERFAMILY SSF46894 138 234 1.87E-24 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB9431 725e07164498d01b0bfec25240635117 239 SMART SM00862 157 233 1.9E-19 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RB9431 725e07164498d01b0bfec25240635117 239 SMART SM00448 2 113 1.4E-40 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB9431 725e07164498d01b0bfec25240635117 239 Pfam PF00072 Response regulator receiver domain 4 113 6.8E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB9431 725e07164498d01b0bfec25240635117 239 Gene3D G3DSA:3.40.50.2300 1 125 8.9E-39 T 11-11-2016 RB9431 725e07164498d01b0bfec25240635117 239 Gene3D G3DSA:1.10.10.10 138 235 1.9E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9431 725e07164498d01b0bfec25240635117 239 SUPERFAMILY SSF52172 1 128 8.25E-40 T 11-11-2016 IPR011006 CheY-like superfamily RB9431 725e07164498d01b0bfec25240635117 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 7.3E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RB861 35a6f855b84a0147103112efde1d8798 499 Pfam PF01618 MotA/TolQ/ExbB proton channel family 201 297 7.0E-14 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RB2420 a12618a5df640c53f2e6a3d93c70a2eb 547 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 164 253 1.6E-6 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB2420 a12618a5df640c53f2e6a3d93c70a2eb 547 Gene3D G3DSA:3.40.50.720 163 298 2.7E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2420 a12618a5df640c53f2e6a3d93c70a2eb 547 Gene3D G3DSA:3.30.360.10 417 543 1.3E-6 T 11-11-2016 RB2420 a12618a5df640c53f2e6a3d93c70a2eb 547 Gene3D G3DSA:3.30.360.10 299 384 1.3E-6 T 11-11-2016 RB2420 a12618a5df640c53f2e6a3d93c70a2eb 547 SUPERFAMILY SSF51735 163 313 1.64E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain RB708 fb3bfb953831d5329ed3127ce4f89928 478 SUPERFAMILY SSF53649 58 461 6.69E-104 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB708 fb3bfb953831d5329ed3127ce4f89928 478 Gene3D G3DSA:3.40.720.10 58 459 1.4E-100 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB708 fb3bfb953831d5329ed3127ce4f89928 478 Pfam PF00884 Sulfatase 60 396 1.0E-70 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB700 b5d73a7648c26ddb63b3fbd0cdaf58ca 1179 PIRSF PIRSF010631 32 1012 0.0 T 11-11-2016 IPR016007 Alpha-L-rhamnosidase RB700 b5d73a7648c26ddb63b3fbd0cdaf58ca 1179 Gene3D G3DSA:2.60.120.260 420 515 5.8E-15 T 11-11-2016 IPR008979 Galactose-binding domain-like RB700 b5d73a7648c26ddb63b3fbd0cdaf58ca 1179 SUPERFAMILY SSF48208 555 967 1.36E-46 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB700 b5d73a7648c26ddb63b3fbd0cdaf58ca 1179 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 210 422 2.0E-72 T 11-11-2016 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal RB700 b5d73a7648c26ddb63b3fbd0cdaf58ca 1179 Pfam PF05592 Bacterial alpha-L-rhamnosidase 430 963 2.9E-201 T 11-11-2016 IPR008902 Bacterial alpha-L-rhamnosidase RB10213 8637a10521426ba55a08bb462e4da141 227 Gene3D G3DSA:1.10.520.20 37 132 6.5E-12 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 38 205 2.5E-27 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 Hamap MF_01416 ATP synthase subunit delta [atpD]. 33 210 17.634 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 Pfam PF00213 ATP synthase delta (OSCP) subunit 39 206 3.2E-43 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 SUPERFAMILY SSF47928 37 137 1.12E-14 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 PRINTS PR00125 ATP synthase delta subunit signature 107 118 4.3E-17 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 PRINTS PR00125 ATP synthase delta subunit signature 37 56 4.3E-17 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 PRINTS PR00125 ATP synthase delta subunit signature 183 201 4.3E-17 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 PRINTS PR00125 ATP synthase delta subunit signature 168 183 4.3E-17 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 RB10213 8637a10521426ba55a08bb462e4da141 227 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 170 189 - T 11-11-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 RB5152 050f8dfc683d91514ca367a0b1f9443f 317 Pfam PF00005 ABC transporter 45 191 1.8E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB5152 050f8dfc683d91514ca367a0b1f9443f 317 SMART SM00382 53 241 3.4E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5152 050f8dfc683d91514ca367a0b1f9443f 317 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB5152 050f8dfc683d91514ca367a0b1f9443f 317 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 29 262 1.1E-97 T 11-11-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 RB5152 050f8dfc683d91514ca367a0b1f9443f 317 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 239 261 4.9E-7 T 11-11-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RB5152 050f8dfc683d91514ca367a0b1f9443f 317 SUPERFAMILY SSF52540 27 261 1.3E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5152 050f8dfc683d91514ca367a0b1f9443f 317 Gene3D G3DSA:3.40.50.300 22 259 1.3E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6730 6ba121c269d409095c9fbea40e44e117 515 Gene3D G3DSA:1.25.40.10 326 363 2.7E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6730 6ba121c269d409095c9fbea40e44e117 515 SUPERFAMILY SSF52266 256 284 3.36E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6730 6ba121c269d409095c9fbea40e44e117 515 SUPERFAMILY SSF52266 106 188 3.36E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6730 6ba121c269d409095c9fbea40e44e117 515 SUPERFAMILY SSF52266 369 446 3.36E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6730 6ba121c269d409095c9fbea40e44e117 515 Gene3D G3DSA:3.40.50.1110 106 187 3.6E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6730 6ba121c269d409095c9fbea40e44e117 515 Gene3D G3DSA:3.40.50.1110 255 286 3.6E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6730 6ba121c269d409095c9fbea40e44e117 515 Gene3D G3DSA:3.40.50.1110 364 447 3.6E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 Gene3D G3DSA:3.40.50.300 145 319 1.7E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 Pfam PF02954 Bacterial regulatory protein, Fis family 412 452 2.0E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 SMART SM00448 6 118 1.3E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 SMART SM00382 167 310 1.2E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 Pfam PF00072 Response regulator receiver domain 8 118 7.4E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 Gene3D G3DSA:3.40.50.2300 5 131 1.2E-32 T 11-11-2016 RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 SUPERFAMILY SSF52172 5 192 8.68E-41 T 11-11-2016 IPR011006 CheY-like superfamily RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 SUPERFAMILY SSF52540 146 389 2.34E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 Gene3D G3DSA:1.10.8.60 320 391 1.1E-27 T 11-11-2016 RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 Pfam PF00158 Sigma-54 interaction domain 147 314 1.4E-67 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 Gene3D G3DSA:1.10.10.60 392 454 3.0E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB10323 102860c9da6eaa8b8ec8259a88edfee6 455 SUPERFAMILY SSF46689 360 454 2.28E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01182 Ornithine decarboxylase signature 43 67 1.2E-24 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01182 Ornithine decarboxylase signature 113 137 1.2E-24 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01182 Ornithine decarboxylase signature 363 376 1.2E-24 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01182 Ornithine decarboxylase signature 343 353 1.2E-24 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01182 Ornithine decarboxylase signature 69 96 1.2E-24 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01182 Ornithine decarboxylase signature 143 165 1.2E-24 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01182 Ornithine decarboxylase signature 311 324 1.2E-24 T 11-11-2016 IPR002433 Ornithine decarboxylase GO:0006596 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 Gene3D G3DSA:2.40.37.10 271 397 1.2E-34 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 59 284 5.3E-52 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 291 395 4.8E-21 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 193 206 3.9E-19 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 276 295 3.9E-19 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 89 3.9E-19 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 3.9E-19 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 91 103 3.9E-19 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 SUPERFAMILY SSF51419 42 287 1.46E-63 T 11-11-2016 IPR029066 PLP-binding barrel RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 Gene3D G3DSA:3.20.20.10 56 270 8.7E-69 T 11-11-2016 IPR029066 PLP-binding barrel RB8469 b83eb157f06fbf910a100f121f6b3c6d 398 SUPERFAMILY SSF50621 266 397 6.91E-34 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 532 688 6.1E-33 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Pfam PF00009 Elongation factor Tu GTP binding domain 534 691 2.3E-32 T 11-11-2016 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 452 497 4.4E-9 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 50 9.9E-8 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Gene3D G3DSA:2.40.30.10 942 1036 1.1E-31 T 11-11-2016 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 SUPERFAMILY SSF52540 524 701 4.25E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Gene3D G3DSA:3.40.50.300 529 690 1.6E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 SUPERFAMILY SSF52156 819 944 1.57E-29 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 2 1035 15.755 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Gene3D G3DSA:2.40.30.10 700 795 5.7E-16 T 11-11-2016 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Pfam PF11987 Translation-initiation factor 2 833 926 3.0E-30 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 Gene3D G3DSA:3.40.50.10050 837 915 3.0E-20 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 SUPERFAMILY SSF50447 941 1035 1.2E-28 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 SUPERFAMILY SSF50447 702 785 1.21E-17 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB5504 f5d2cb533c0ce45e9d454ee537c71aaf 1038 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 443 1036 8.7E-212 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RB13291 6ab423d4522de7d7b7cf278cfb428764 822 Pfam PF00263 Bacterial type II and III secretion system protein 435 594 1.2E-41 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 RB13291 6ab423d4522de7d7b7cf278cfb428764 822 Pfam PF03958 Bacterial type II/III secretion system short domain 303 358 1.8E-7 T 11-11-2016 IPR005644 NolW-like RB13291 6ab423d4522de7d7b7cf278cfb428764 822 SMART SM00965 144 192 7.3E-5 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RB13291 6ab423d4522de7d7b7cf278cfb428764 822 PRINTS PR00811 Bacterial general secretion pathway protein D signature 431 455 1.6E-15 T 11-11-2016 IPR001775 GspD/PilQ family RB13291 6ab423d4522de7d7b7cf278cfb428764 822 PRINTS PR00811 Bacterial general secretion pathway protein D signature 358 368 1.6E-15 T 11-11-2016 IPR001775 GspD/PilQ family RB13291 6ab423d4522de7d7b7cf278cfb428764 822 PRINTS PR00811 Bacterial general secretion pathway protein D signature 559 577 1.6E-15 T 11-11-2016 IPR001775 GspD/PilQ family RB13291 6ab423d4522de7d7b7cf278cfb428764 822 PRINTS PR00811 Bacterial general secretion pathway protein D signature 582 596 1.6E-15 T 11-11-2016 IPR001775 GspD/PilQ family RB11021 af58038594e8dd669288037b03ba82ee 295 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB11021 af58038594e8dd669288037b03ba82ee 295 Gene3D G3DSA:3.40.50.300 46 274 6.3E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11021 af58038594e8dd669288037b03ba82ee 295 SMART SM00382 73 260 2.6E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11021 af58038594e8dd669288037b03ba82ee 295 Pfam PF00005 ABC transporter 64 211 2.0E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB11021 af58038594e8dd669288037b03ba82ee 295 SUPERFAMILY SSF52540 47 270 8.68E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3971 33766cf67d4cb1c5e0d441ac01ca9f8c 332 Gene3D G3DSA:3.40.50.1110 254 277 3.2E-6 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3971 33766cf67d4cb1c5e0d441ac01ca9f8c 332 Gene3D G3DSA:3.40.50.1110 27 215 3.2E-6 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3971 33766cf67d4cb1c5e0d441ac01ca9f8c 332 SUPERFAMILY SSF52266 260 282 2.44E-6 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3971 33766cf67d4cb1c5e0d441ac01ca9f8c 332 SUPERFAMILY SSF52266 36 223 2.44E-6 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3971 33766cf67d4cb1c5e0d441ac01ca9f8c 332 Pfam PF16227 Domain of unknown function (DUF4886) 39 209 5.8E-32 T 11-11-2016 IPR032616 Domain of unknown function DUF4886 RB9433 a6b14b2e37bbeba778f9095686d1dec2 234 Gene3D G3DSA:3.90.1570.10 41 217 7.4E-38 T 11-11-2016 IPR012296 Nuclease, putative, TT1808 RB9433 a6b14b2e37bbeba778f9095686d1dec2 234 SUPERFAMILY SSF52980 39 217 6.97E-36 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RB9433 a6b14b2e37bbeba778f9095686d1dec2 234 Pfam PF05685 Putative restriction endonuclease 50 213 2.2E-28 T 11-11-2016 IPR008538 Domain of unknown function DUF820 RB12372 c48b1fa7b98c3188b38f142d46d64bb6 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 57 222 1.5E-29 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12372 c48b1fa7b98c3188b38f142d46d64bb6 242 SUPERFAMILY SSF88659 166 226 6.11E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12372 c48b1fa7b98c3188b38f142d46d64bb6 242 Gene3D G3DSA:1.10.1740.10 37 145 2.9E-28 T 11-11-2016 RB12372 c48b1fa7b98c3188b38f142d46d64bb6 242 Pfam PF08281 Sigma-70, region 4 171 222 1.2E-14 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12372 c48b1fa7b98c3188b38f142d46d64bb6 242 Gene3D G3DSA:1.10.10.10 166 227 1.1E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB12372 c48b1fa7b98c3188b38f142d46d64bb6 242 Pfam PF04542 Sigma-70 region 2 60 127 1.0E-13 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12372 c48b1fa7b98c3188b38f142d46d64bb6 242 SUPERFAMILY SSF88946 37 135 5.3E-24 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11105 2fb8938be3ff5feceb4dc18e3e62c33a 286 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 56 274 3.9E-21 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB11105 2fb8938be3ff5feceb4dc18e3e62c33a 286 Gene3D G3DSA:3.60.10.10 45 282 5.7E-25 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB11105 2fb8938be3ff5feceb4dc18e3e62c33a 286 SUPERFAMILY SSF56219 54 281 3.93E-42 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 PRINTS PR00834 HtrA/DegQ protease family signature 321 333 3.4E-26 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 PRINTS PR00834 HtrA/DegQ protease family signature 122 134 3.4E-26 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 PRINTS PR00834 HtrA/DegQ protease family signature 183 207 3.4E-26 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 3.4E-26 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 3.4E-26 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 PRINTS PR00834 HtrA/DegQ protease family signature 250 267 3.4E-26 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 Pfam PF07691 PA14 domain 388 523 2.4E-26 T 11-11-2016 IPR011658 PA14 domain RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 Gene3D G3DSA:3.90.182.10 387 505 1.9E-15 T 11-11-2016 IPR011658 PA14 domain RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 Gene3D G3DSA:2.40.10.10 84 176 1.5E-14 T 11-11-2016 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 SUPERFAMILY SSF56988 425 502 3.79E-8 T 11-11-2016 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 Gene3D G3DSA:2.40.10.10 177 297 3.0E-28 T 11-11-2016 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 Pfam PF13365 Trypsin-like peptidase domain 113 257 8.9E-24 T 11-11-2016 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 Pfam PF13180 PDZ domain 295 366 2.3E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 SMART SM00228 293 364 7.7E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 Gene3D G3DSA:2.30.42.10 305 371 3.4E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 SUPERFAMILY SSF50156 266 371 2.76E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 SUPERFAMILY SSF50494 58 284 1.24E-40 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB5645 81e50deb87c8f79f96dca3f2b5b140c0 556 SMART SM00758 387 523 6.9E-33 T 11-11-2016 IPR011658 PA14 domain RB7818 dae487341c38c4e2e3c204db5fb4828e 121 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 121 37.193 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 121 8.3E-65 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 Gene3D G3DSA:2.40.50.140 1 121 6.5E-61 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB7818 dae487341c38c4e2e3c204db5fb4828e 121 PIRSF PIRSF002133 1 121 1.8E-54 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 Pfam PF00164 Ribosomal protein S12/S23 4 121 5.4E-41 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 SUPERFAMILY SSF50249 2 121 4.74E-50 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB7818 dae487341c38c4e2e3c204db5fb4828e 121 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.6E-54 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.6E-54 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 PRINTS PR01034 Ribosomal protein S12 signature 110 121 1.6E-54 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.6E-54 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.6E-54 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.6E-54 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7818 dae487341c38c4e2e3c204db5fb4828e 121 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB2426 a39fae293c5aba026cc76ae5a2dfe7f3 576 SUPERFAMILY SSF46565 12 62 9.12E-6 T 11-11-2016 IPR001623 DnaJ domain RB2426 a39fae293c5aba026cc76ae5a2dfe7f3 576 Gene3D G3DSA:1.10.287.110 18 62 9.7E-5 T 11-11-2016 IPR001623 DnaJ domain RB2426 a39fae293c5aba026cc76ae5a2dfe7f3 576 SMART SM00271 11 63 0.0075 T 11-11-2016 IPR001623 DnaJ domain RB9790 f4ec3d1274ee8c5164119423c7b057ce 112 SUPERFAMILY SSF54197 2 111 1.08E-38 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 RB9790 f4ec3d1274ee8c5164119423c7b057ce 112 PRINTS PR00332 Histidine triad family signature 4 20 6.2E-20 T 11-11-2016 IPR001310 Histidine triad (HIT) protein RB9790 f4ec3d1274ee8c5164119423c7b057ce 112 PRINTS PR00332 Histidine triad family signature 25 43 6.2E-20 T 11-11-2016 IPR001310 Histidine triad (HIT) protein RB9790 f4ec3d1274ee8c5164119423c7b057ce 112 PRINTS PR00332 Histidine triad family signature 92 102 6.2E-20 T 11-11-2016 IPR001310 Histidine triad (HIT) protein RB9790 f4ec3d1274ee8c5164119423c7b057ce 112 Pfam PF01230 HIT domain 11 106 8.0E-30 T 11-11-2016 IPR001310 Histidine triad (HIT) protein RB9790 f4ec3d1274ee8c5164119423c7b057ce 112 Gene3D G3DSA:3.30.428.10 2 112 4.2E-43 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 RB9790 f4ec3d1274ee8c5164119423c7b057ce 112 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 11-11-2016 IPR019808 Histidine triad, conserved site RB12625 7da43ae080aa32411b86f95418f240d7 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 124 1.1E-56 T 11-11-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB12625 7da43ae080aa32411b86f95418f240d7 127 Gene3D G3DSA:3.30.420.80 5 127 1.1E-51 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RB12625 7da43ae080aa32411b86f95418f240d7 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 127 32.117 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RB12625 7da43ae080aa32411b86f95418f240d7 127 PIRSF PIRSF002131 1 127 5.7E-52 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RB12625 7da43ae080aa32411b86f95418f240d7 127 Pfam PF00411 Ribosomal protein S11 17 126 1.3E-46 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RB12625 7da43ae080aa32411b86f95418f240d7 127 SUPERFAMILY SSF53137 13 127 2.14E-47 T 11-11-2016 RB12625 7da43ae080aa32411b86f95418f240d7 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 11-11-2016 IPR018102 Ribosomal S11, conserved site RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 Pfam PF13432 Tetratricopeptide repeat 60 114 0.0078 T 11-11-2016 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 SMART SM00028 287 320 0.025 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 SMART SM00028 219 252 250.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 778 844 1.4E-6 T 11-11-2016 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 570 629 2.2E-12 T 11-11-2016 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 Pfam PF07593 ASPIC and UnbV 948 1013 4.3E-14 T 11-11-2016 IPR011519 ASPIC/UnbV RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 SUPERFAMILY SSF48452 67 342 5.76E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 Gene3D G3DSA:2.130.10.130 484 634 1.2E-23 T 11-11-2016 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 Gene3D G3DSA:2.130.10.130 724 919 1.2E-23 T 11-11-2016 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 SUPERFAMILY SSF69318 761 925 6.02E-45 T 11-11-2016 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 SUPERFAMILY SSF69318 501 725 6.02E-45 T 11-11-2016 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 Gene3D G3DSA:1.25.40.10 58 174 7.6E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3379 d30f852e41cdc1efcc3f38450a560a6c 1032 Gene3D G3DSA:1.25.40.10 221 395 7.6E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4787 bd1b71ece51ff26136f9007b05dc254d 470 Gene3D G3DSA:3.30.1120.10 415 462 9.5E-10 T 11-11-2016 RB4787 bd1b71ece51ff26136f9007b05dc254d 470 Pfam PF00884 Sulfatase 26 371 1.2E-64 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB4787 bd1b71ece51ff26136f9007b05dc254d 470 Gene3D G3DSA:3.40.720.10 25 414 5.4E-97 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4787 bd1b71ece51ff26136f9007b05dc254d 470 SUPERFAMILY SSF53649 25 460 7.27E-109 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 SUPERFAMILY SSF103473 60 455 1.07E-58 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 Gene3D G3DSA:1.20.1250.20 272 454 4.7E-14 T 11-11-2016 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 Gene3D G3DSA:1.20.1250.20 64 248 6.4E-38 T 11-11-2016 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 162 183 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 220 240 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 336 357 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 192 214 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 73 89 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 308 328 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 361 381 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 135 159 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 PRINTS PR01035 Tetracycline resistance protein signature 396 419 7.2E-53 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 Pfam PF07690 Major Facilitator Superfamily 67 409 1.6E-45 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB990 55d3585fdcde7c4170ef3ce13ae8bcae 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 122 138 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RB9593 8744abda2df683251dd7a09ace98a8af 818 Pfam PF07583 Protein of unknown function (DUF1549) 311 492 5.5E-47 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB9593 8744abda2df683251dd7a09ace98a8af 818 Pfam PF07587 Protein of unknown function (DUF1553) 545 770 3.7E-46 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB9593 8744abda2df683251dd7a09ace98a8af 818 Gene3D G3DSA:2.60.40.1080 209 279 5.2E-4 T 11-11-2016 RB11642 049e2435b892f8f72c067b0c0d6f287c 552 SUPERFAMILY SSF53335 45 552 5.29E-125 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11642 049e2435b892f8f72c067b0c0d6f287c 552 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 317 323 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RB11642 049e2435b892f8f72c067b0c0d6f287c 552 Gene3D G3DSA:3.40.50.150 209 444 1.1E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11642 049e2435b892f8f72c067b0c0d6f287c 552 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 344 368 5.7E-20 T 11-11-2016 RB11642 049e2435b892f8f72c067b0c0d6f287c 552 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 314 326 5.7E-20 T 11-11-2016 RB11642 049e2435b892f8f72c067b0c0d6f287c 552 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 206 222 5.7E-20 T 11-11-2016 RB11642 049e2435b892f8f72c067b0c0d6f287c 552 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 230 244 5.7E-20 T 11-11-2016 RB11642 049e2435b892f8f72c067b0c0d6f287c 552 Pfam PF12161 HsdM N-terminal domain 46 177 2.5E-19 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RB11642 049e2435b892f8f72c067b0c0d6f287c 552 Pfam PF02384 N-6 DNA Methylase 184 520 1.5E-59 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RB12238 b769562d3aea9e503ba134ec55759bdc 586 Pfam PF04972 BON domain 356 425 4.9E-12 T 11-11-2016 IPR007055 BON domain RB12238 b769562d3aea9e503ba134ec55759bdc 586 Pfam PF04972 BON domain 199 266 2.9E-14 T 11-11-2016 IPR007055 BON domain RB12238 b769562d3aea9e503ba134ec55759bdc 586 Pfam PF04972 BON domain 272 338 2.8E-8 T 11-11-2016 IPR007055 BON domain RB12238 b769562d3aea9e503ba134ec55759bdc 586 Pfam PF04972 BON domain 432 499 1.4E-11 T 11-11-2016 IPR007055 BON domain RB12238 b769562d3aea9e503ba134ec55759bdc 586 Pfam PF04972 BON domain 129 193 1.5E-13 T 11-11-2016 IPR007055 BON domain RB12238 b769562d3aea9e503ba134ec55759bdc 586 Pfam PF04972 BON domain 506 572 1.8E-11 T 11-11-2016 IPR007055 BON domain RB12238 b769562d3aea9e503ba134ec55759bdc 586 SMART SM00749 437 500 85.0 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria RB12238 b769562d3aea9e503ba134ec55759bdc 586 SMART SM00749 132 195 0.13 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria RB12238 b769562d3aea9e503ba134ec55759bdc 586 SMART SM00749 204 267 6.4 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria RB12238 b769562d3aea9e503ba134ec55759bdc 586 SMART SM00749 277 339 62.0 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria RB12238 b769562d3aea9e503ba134ec55759bdc 586 SMART SM00749 361 425 260.0 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria RB9844 90ab37fa6f60ef51611c8fac3aaeacb9 317 Pfam PF01578 Cytochrome C assembly protein 83 277 3.8E-7 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RB9911 ec2c66ff135f773f4a0499a344913e89 627 Gene3D G3DSA:2.80.10.50 501 623 3.7E-6 T 11-11-2016 RB9911 ec2c66ff135f773f4a0499a344913e89 627 SMART SM00633 142 411 3.8E-33 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 RB9911 ec2c66ff135f773f4a0499a344913e89 627 SUPERFAMILY SSF50370 506 624 2.7E-5 T 11-11-2016 IPR000772 Ricin B, lectin domain RB9911 ec2c66ff135f773f4a0499a344913e89 627 PRINTS PR00134 Glycosyl hydrolase family 10 signature 211 222 9.7E-8 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 RB9911 ec2c66ff135f773f4a0499a344913e89 627 PRINTS PR00134 Glycosyl hydrolase family 10 signature 271 282 9.7E-8 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 RB9911 ec2c66ff135f773f4a0499a344913e89 627 PRINTS PR00134 Glycosyl hydrolase family 10 signature 300 312 9.7E-8 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 RB9911 ec2c66ff135f773f4a0499a344913e89 627 Pfam PF00331 Glycosyl hydrolase family 10 93 402 2.8E-58 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 RB9911 ec2c66ff135f773f4a0499a344913e89 627 SUPERFAMILY SSF51445 92 406 7.41E-71 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB9911 ec2c66ff135f773f4a0499a344913e89 627 Gene3D G3DSA:3.20.20.80 94 402 1.1E-72 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB7840 fdfd7eee9c6f93527745ab784407940c 236 Pfam PF00189 Ribosomal protein S3, C-terminal domain 125 207 6.5E-34 T 11-11-2016 RB7840 fdfd7eee9c6f93527745ab784407940c 236 Pfam PF07650 KH domain 38 116 3.5E-18 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7840 fdfd7eee9c6f93527745ab784407940c 236 Gene3D G3DSA:3.30.300.20 18 111 5.0E-30 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta RB7840 fdfd7eee9c6f93527745ab784407940c 236 SUPERFAMILY SSF54814 2 111 6.73E-34 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RB7840 fdfd7eee9c6f93527745ab784407940c 236 SUPERFAMILY SSF54821 113 210 5.1E-34 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7840 fdfd7eee9c6f93527745ab784407940c 236 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 212 3.1E-80 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RB7840 fdfd7eee9c6f93527745ab784407940c 236 SMART SM00322 65 130 1.2E-6 T 11-11-2016 IPR004087 K Homology domain GO:0003676 RB7840 fdfd7eee9c6f93527745ab784407940c 236 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 211 35.447 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RB7840 fdfd7eee9c6f93527745ab784407940c 236 Gene3D G3DSA:3.30.1140.32 114 210 9.0E-38 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7840 fdfd7eee9c6f93527745ab784407940c 236 ProSitePatterns PS00548 Ribosomal protein S3 signature. 168 202 - T 11-11-2016 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 SUPERFAMILY SSF81452 568 815 1.88E-23 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 67 90 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 94 118 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 451 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 380 399 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 247 268 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 317 338 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 352 370 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 167 185 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 20 45 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 293 308 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 196 215 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 148 4.7E-75 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 21 524 2.8E-208 T 11-11-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 473 2.0E-128 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 Gene3D G3DSA:1.20.210.10 16 539 2.9E-149 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 Gene3D G3DSA:1.20.120.80 650 815 2.9E-8 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 SUPERFAMILY SSF81442 25 548 1.16E-148 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4416 0ab95aaf99d51ead3a0b6fe417bb0f3a 833 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 249 303 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB10333 57ad9d3ef9aaeee8ccde4222501993ea 553 SMART SM00220 24 273 5.4E-9 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10333 57ad9d3ef9aaeee8ccde4222501993ea 553 Gene3D G3DSA:3.30.200.20 25 118 8.9E-18 T 11-11-2016 RB10333 57ad9d3ef9aaeee8ccde4222501993ea 553 SUPERFAMILY SSF56112 24 277 1.11E-38 T 11-11-2016 IPR011009 Protein kinase-like domain RB10333 57ad9d3ef9aaeee8ccde4222501993ea 553 Gene3D G3DSA:1.10.510.10 119 269 1.5E-17 T 11-11-2016 RB10333 57ad9d3ef9aaeee8ccde4222501993ea 553 Pfam PF00069 Protein kinase domain 24 268 2.3E-19 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10277 4768f3077bffe4607111116c8f86ae5c 476 SUPERFAMILY SSF51621 4 78 7.33E-90 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB10277 4768f3077bffe4607111116c8f86ae5c 476 SUPERFAMILY SSF51621 174 344 7.33E-90 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB10277 4768f3077bffe4607111116c8f86ae5c 476 SUPERFAMILY SSF52935 329 475 6.15E-25 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 SUPERFAMILY SSF50800 73 174 4.36E-20 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain RB10277 4768f3077bffe4607111116c8f86ae5c 476 Gene3D G3DSA:2.40.33.10 76 175 9.3E-23 T 11-11-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 453 2.2E-16 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 Gene3D G3DSA:3.40.1380.20 332 454 1.9E-25 T 11-11-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 Gene3D G3DSA:3.20.20.60 176 331 9.8E-97 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB10277 4768f3077bffe4607111116c8f86ae5c 476 Gene3D G3DSA:3.20.20.60 5 75 9.8E-97 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB10277 4768f3077bffe4607111116c8f86ae5c 476 PRINTS PR01050 Pyruvate kinase family signature 223 249 7.6E-63 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 PRINTS PR01050 Pyruvate kinase family signature 193 207 7.6E-63 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 PRINTS PR01050 Pyruvate kinase family signature 300 318 7.6E-63 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 PRINTS PR01050 Pyruvate kinase family signature 250 274 7.6E-63 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 PRINTS PR01050 Pyruvate kinase family signature 62 78 7.6E-63 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 PRINTS PR01050 Pyruvate kinase family signature 275 299 7.6E-63 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 PRINTS PR01050 Pyruvate kinase family signature 319 335 7.6E-63 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 472 7.7E-144 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB10277 4768f3077bffe4607111116c8f86ae5c 476 Pfam PF00224 Pyruvate kinase, barrel domain 5 345 1.6E-114 T 11-11-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RB7168 b027f077d0327487907f90a578d7803b 129 Pfam PF00550 Phosphopantetheine attachment site 11 64 9.6E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB7168 b027f077d0327487907f90a578d7803b 129 SUPERFAMILY SSF47336 5 76 9.55E-14 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB7168 b027f077d0327487907f90a578d7803b 129 ProSitePatterns PS00012 Phosphopantetheine attachment site. 36 51 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site RB7168 b027f077d0327487907f90a578d7803b 129 Gene3D G3DSA:1.10.1200.10 5 64 1.8E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB7168 b027f077d0327487907f90a578d7803b 129 Gene3D G3DSA:1.10.1200.10 111 128 1.8E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB7168 b027f077d0327487907f90a578d7803b 129 Hamap MF_01217 Acyl carrier protein [acpP]. 7 87 13.553 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 Gene3D G3DSA:3.30.200.20 152 219 1.3E-21 T 11-11-2016 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 SUPERFAMILY SSF56112 151 417 1.27E-74 T 11-11-2016 IPR011009 Protein kinase-like domain RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 Pfam PF16868 NMT1-like family 496 730 2.9E-25 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 272 284 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 Gene3D G3DSA:3.40.190.10 699 727 1.6E-8 T 11-11-2016 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 Gene3D G3DSA:3.40.190.10 490 566 1.6E-8 T 11-11-2016 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 SMART SM00220 154 416 1.8E-64 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 Gene3D G3DSA:3.40.190.10 567 698 1.5E-17 T 11-11-2016 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 Pfam PF00069 Protein kinase domain 154 407 1.5E-50 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 SUPERFAMILY SSF53850 490 757 4.73E-39 T 11-11-2016 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 Gene3D G3DSA:1.10.510.10 220 408 3.5E-50 T 11-11-2016 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 160 183 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB10119 7355d3fd69b7e01a9eeca1f4fec0331b 766 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 474 729 4.1E-27 T 11-11-2016 IPR011852 TRAP transporter solute receptor, TAXI family RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 Gene3D G3DSA:1.25.10.10 529 591 5.8E-6 T 11-11-2016 IPR011989 Armadillo-like helical RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 Gene3D G3DSA:1.10.710.10 42 86 3.7E-34 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 Gene3D G3DSA:1.10.710.10 182 276 3.7E-34 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 Gene3D G3DSA:1.10.710.10 315 421 3.7E-34 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 SUPERFAMILY SSF48371 529 591 3.09E-7 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 Pfam PF13432 Tetratricopeptide repeat 722 758 0.0032 T 11-11-2016 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 SUPERFAMILY SSF48695 111 421 6.25E-59 T 11-11-2016 IPR011031 Multihaem cytochrome RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 SUPERFAMILY SSF48695 42 66 6.25E-59 T 11-11-2016 IPR011031 Multihaem cytochrome RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 SUPERFAMILY SSF48695 458 498 6.25E-59 T 11-11-2016 IPR011031 Multihaem cytochrome RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 Gene3D G3DSA:1.25.40.10 600 670 2.2E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 Gene3D G3DSA:1.25.40.10 724 771 2.2E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 SMART SM00028 622 655 1.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 SMART SM00028 726 759 1.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 SUPERFAMILY SSF48452 601 670 8.41E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 SUPERFAMILY SSF48452 709 759 8.41E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6255 d3e3fadbdbdf01fb69a1050d95cec675 778 Pfam PF13435 Cytochrome c554 and c-prime 191 229 0.0014 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB2654 1e0d663fe286fbde34b20e0ab1d483d9 709 SUPERFAMILY SSF111369 454 570 2.88E-6 T 11-11-2016 RB2654 1e0d663fe286fbde34b20e0ab1d483d9 709 Gene3D G3DSA:2.40.50.100 551 590 2.4E-8 T 11-11-2016 RB2654 1e0d663fe286fbde34b20e0ab1d483d9 709 Gene3D G3DSA:2.40.50.100 460 486 2.4E-8 T 11-11-2016 RB2654 1e0d663fe286fbde34b20e0ab1d483d9 709 Pfam PF13533 Biotin-lipoyl like 460 496 7.1E-8 T 11-11-2016 RB2654 1e0d663fe286fbde34b20e0ab1d483d9 709 Pfam PF13437 HlyD family secretion protein 559 648 1.6E-4 T 11-11-2016 RB12400 9dff442e5c59d0aaae3568e5086245d9 451 Gene3D G3DSA:1.20.1540.10 16 213 2.2E-21 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB12400 9dff442e5c59d0aaae3568e5086245d9 451 SUPERFAMILY SSF144091 11 217 4.97E-24 T 11-11-2016 RB12400 9dff442e5c59d0aaae3568e5086245d9 451 Pfam PF01694 Rhomboid family 60 214 1.4E-20 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB7096 89d689bb72d4edc3e85df992a4b3722f 355 Gene3D G3DSA:3.30.70.1140 2 70 7.4E-23 T 11-11-2016 RB7096 89d689bb72d4edc3e85df992a4b3722f 355 Pfam PF00793 DAHP synthetase I family 86 329 6.4E-74 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RB7096 89d689bb72d4edc3e85df992a4b3722f 355 SUPERFAMILY SSF51569 2 335 1.56E-110 T 11-11-2016 RB7096 89d689bb72d4edc3e85df992a4b3722f 355 Gene3D G3DSA:3.20.20.70 72 335 1.2E-95 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB7096 89d689bb72d4edc3e85df992a4b3722f 355 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 328 1.8E-113 T 11-11-2016 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 SUPERFAMILY SSF158472 320 368 7.98E-9 T 11-11-2016 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 Gene3D G3DSA:3.30.565.10 469 628 2.2E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11604 3ee79083149bab425b6732b2b7dab9e3 652 SMART SM00388 400 466 1.6E-24 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 SUPERFAMILY SSF47384 386 468 6.08E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 628 1.1E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11604 3ee79083149bab425b6732b2b7dab9e3 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 627 5.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 564 5.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 608 5.0E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 SMART SM00387 512 630 1.7E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11604 3ee79083149bab425b6732b2b7dab9e3 652 Pfam PF00672 HAMP domain 303 367 1.9E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 SUPERFAMILY SSF55874 455 630 7.99E-47 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB11604 3ee79083149bab425b6732b2b7dab9e3 652 Pfam PF00512 His Kinase A (phospho-acceptor) domain 401 466 1.1E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 SMART SM00304 319 371 3.7E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB11604 3ee79083149bab425b6732b2b7dab9e3 652 Gene3D G3DSA:1.10.287.130 394 462 1.4E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB12124 533b6bd1abf0135b8872833ef5cbe6e3 857 SUPERFAMILY SSF46626 37 136 2.63E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12124 533b6bd1abf0135b8872833ef5cbe6e3 857 Pfam PF07587 Protein of unknown function (DUF1553) 533 797 2.2E-94 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB12124 533b6bd1abf0135b8872833ef5cbe6e3 857 Gene3D G3DSA:1.10.760.10 65 132 1.6E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12124 533b6bd1abf0135b8872833ef5cbe6e3 857 Pfam PF07583 Protein of unknown function (DUF1549) 161 366 1.6E-84 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB12124 533b6bd1abf0135b8872833ef5cbe6e3 857 Pfam PF07635 Planctomycete cytochrome C 68 113 1.5E-8 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 Gene3D G3DSA:3.30.540.10 50 196 1.4E-43 T 11-11-2016 RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 SUPERFAMILY SSF56655 48 308 1.31E-68 T 11-11-2016 RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 50 307 1.3E-94 T 11-11-2016 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 PRINTS PR00377 Inositol monophosphatase superfamily signature 104 120 4.2E-17 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 102 4.2E-17 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 PRINTS PR00377 Inositol monophosphatase superfamily signature 124 140 4.2E-17 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 PRINTS PR00377 Inositol monophosphatase superfamily signature 258 282 4.2E-17 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 Pfam PF00459 Inositol monophosphatase family 51 305 4.3E-44 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB1412 bc48427d2fdcf0855228dd9f9ff25d1d 308 Gene3D G3DSA:3.40.190.80 197 308 3.0E-21 T 11-11-2016 RB2022 5510b268b0586cb23d03e2cfaa688da0 261 Pfam PF13277 YmdB-like protein 4 253 5.5E-94 T 11-11-2016 IPR005235 Metallophosphoesterase, YmdB-like RB2022 5510b268b0586cb23d03e2cfaa688da0 261 SUPERFAMILY SSF56300 1 253 8.01E-72 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB2022 5510b268b0586cb23d03e2cfaa688da0 261 Gene3D G3DSA:3.60.21.30 2 255 4.5E-97 T 11-11-2016 RB2022 5510b268b0586cb23d03e2cfaa688da0 261 PIRSF PIRSF004789 1 261 1.0E-97 T 11-11-2016 IPR005235 Metallophosphoesterase, YmdB-like RB8885 e5e4a379ee2d1d5017507771bd6bd480 505 SUPERFAMILY SSF63829 377 486 2.88E-8 T 11-11-2016 RB8885 e5e4a379ee2d1d5017507771bd6bd480 505 Pfam PF05787 Bacterial protein of unknown function (DUF839) 177 491 2.5E-54 T 11-11-2016 IPR008557 Protein of unknown function DUF839 RB8885 e5e4a379ee2d1d5017507771bd6bd480 505 Pfam PF05787 Bacterial protein of unknown function (DUF839) 81 172 1.2E-7 T 11-11-2016 IPR008557 Protein of unknown function DUF839 RB8885 e5e4a379ee2d1d5017507771bd6bd480 505 Gene3D G3DSA:2.120.10.30 233 309 8.3E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB8885 e5e4a379ee2d1d5017507771bd6bd480 505 Gene3D G3DSA:2.120.10.30 348 486 8.3E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB380 855c996253d46754bf83da682b0aa5bd 534 SUPERFAMILY SSF63380 163 377 1.64E-48 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 Pfam PF00667 FAD binding domain 165 357 1.1E-26 T 11-11-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 483 491 4.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 391 410 4.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 203 213 4.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 353 362 4.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 429 440 4.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 460 476 4.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 320 327 4.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 416 425 4.5E-30 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 SUPERFAMILY SSF52343 379 534 5.76E-50 T 11-11-2016 RB380 855c996253d46754bf83da682b0aa5bd 534 Gene3D G3DSA:1.20.990.10 214 317 1.4E-5 T 11-11-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 Gene3D G3DSA:3.40.50.80 391 533 3.1E-59 T 11-11-2016 RB380 855c996253d46754bf83da682b0aa5bd 534 Pfam PF00175 Oxidoreductase NAD-binding domain 392 498 4.8E-19 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RB380 855c996253d46754bf83da682b0aa5bd 534 Gene3D G3DSA:2.40.30.10 163 213 7.6E-36 T 11-11-2016 RB380 855c996253d46754bf83da682b0aa5bd 534 Gene3D G3DSA:2.40.30.10 318 390 7.6E-36 T 11-11-2016 RB10858 a4538dc9b425719849918066a7ffbe76 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 233 1.5E-27 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB10858 a4538dc9b425719849918066a7ffbe76 335 Gene3D G3DSA:3.40.50.720 7 325 2.7E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10858 a4538dc9b425719849918066a7ffbe76 335 SUPERFAMILY SSF51735 3 268 2.34E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10858 a4538dc9b425719849918066a7ffbe76 335 SUPERFAMILY SSF51735 298 332 2.34E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9689 139f86b25d094313de48081c28e1f305 175 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 7 161 6.0E-56 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RB9689 139f86b25d094313de48081c28e1f305 175 PIRSF PIRSF028301 1 174 5.0E-61 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RB9689 139f86b25d094313de48081c28e1f305 175 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 11 161 2.4E-58 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RB9470 aedd0efccd0116e33d257c91253bd084 852 SUPERFAMILY SSF56024 652 833 3.36E-71 T 11-11-2016 RB9470 aedd0efccd0116e33d257c91253bd084 852 Pfam PF13089 Polyphosphate kinase N-terminal domain 93 197 3.2E-34 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RB9470 aedd0efccd0116e33d257c91253bd084 852 Gene3D G3DSA:3.30.870.10 467 650 7.7E-70 T 11-11-2016 RB9470 aedd0efccd0116e33d257c91253bd084 852 SUPERFAMILY SSF143724 196 270 2.94E-6 T 11-11-2016 RB9470 aedd0efccd0116e33d257c91253bd084 852 SUPERFAMILY SSF140356 91 194 1.44E-32 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RB9470 aedd0efccd0116e33d257c91253bd084 852 Gene3D G3DSA:3.30.1840.10 302 451 3.2E-53 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RB9470 aedd0efccd0116e33d257c91253bd084 852 Gene3D G3DSA:3.30.1840.10 195 253 3.2E-53 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RB9470 aedd0efccd0116e33d257c91253bd084 852 SUPERFAMILY SSF56024 467 646 9.87E-53 T 11-11-2016 RB9470 aedd0efccd0116e33d257c91253bd084 852 SUPERFAMILY SSF143724 303 456 5.1E-32 T 11-11-2016 RB9470 aedd0efccd0116e33d257c91253bd084 852 Hamap MF_00347 Polyphosphate kinase [ppk]. 90 832 30.499 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RB9470 aedd0efccd0116e33d257c91253bd084 852 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 347 829 1.9E-194 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RB9470 aedd0efccd0116e33d257c91253bd084 852 Gene3D G3DSA:3.30.870.10 651 834 1.2E-74 T 11-11-2016 RB9470 aedd0efccd0116e33d257c91253bd084 852 Pfam PF02503 Polyphosphate kinase middle domain 211 473 7.9E-58 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RB9470 aedd0efccd0116e33d257c91253bd084 852 Pfam PF13090 Polyphosphate kinase C-terminal domain 481 828 1.2E-151 T 11-11-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 Pfam PF13365 Trypsin-like peptidase domain 97 240 2.5E-16 T 11-11-2016 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 SUPERFAMILY SSF50494 67 274 9.2E-25 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 Gene3D G3DSA:2.40.10.10 167 277 4.6E-10 T 11-11-2016 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 Gene3D G3DSA:2.40.10.10 97 166 5.9E-12 T 11-11-2016 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 4.8E-8 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 PRINTS PR00834 HtrA/DegQ protease family signature 326 338 4.8E-8 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 4.8E-8 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 Pfam PF13180 PDZ domain 310 372 2.7E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 Gene3D G3DSA:2.30.42.10 309 374 3.4E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 SMART SM00228 295 368 7.7E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7368 dfbed35b05eb2d5d2a240a9a1fce85f8 377 SUPERFAMILY SSF50156 294 376 1.58E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1153 4a605a2d47e9218ec46d8e779bb21503 154 Pfam PF07811 TadE-like protein 25 66 1.4E-13 T 11-11-2016 IPR012495 TadE-like RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 SMART SM00388 207 272 3.6E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 421 1.4E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 3.9E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 3.9E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 3.9E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 3.9E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 207 271 5.7E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 SMART SM00387 316 423 3.9E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 Gene3D G3DSA:1.10.287.130 197 257 2.8E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 SUPERFAMILY SSF47384 190 271 4.51E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 Pfam PF00672 HAMP domain 135 202 2.1E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 SUPERFAMILY SSF55874 262 421 7.33E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4994 34f0f5d2dfd42da0c47959db7c98524f 433 Gene3D G3DSA:3.30.565.10 258 420 8.3E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5727 b88aa9ee459fdadbeab584a34696df9b 405 SUPERFAMILY SSF55347 198 359 5.45E-12 T 11-11-2016 RB5727 b88aa9ee459fdadbeab584a34696df9b 405 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 62 189 1.1E-17 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB5727 b88aa9ee459fdadbeab584a34696df9b 405 SUPERFAMILY SSF51735 40 220 1.8E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5727 b88aa9ee459fdadbeab584a34696df9b 405 Gene3D G3DSA:3.40.50.720 57 206 7.3E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5727 b88aa9ee459fdadbeab584a34696df9b 405 Gene3D G3DSA:3.30.360.10 207 402 1.6E-13 T 11-11-2016 RB2982 98a60133b13864fb262715c2f611b997 614 Pfam PF00654 Voltage gated chloride channel 84 444 7.1E-88 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RB2982 98a60133b13864fb262715c2f611b997 614 Gene3D G3DSA:1.10.3080.10 13 451 4.4E-77 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 RB2982 98a60133b13864fb262715c2f611b997 614 PRINTS PR00762 Chloride channel signature 413 432 1.9E-24 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RB2982 98a60133b13864fb262715c2f611b997 614 PRINTS PR00762 Chloride channel signature 360 380 1.9E-24 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RB2982 98a60133b13864fb262715c2f611b997 614 PRINTS PR00762 Chloride channel signature 178 197 1.9E-24 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RB2982 98a60133b13864fb262715c2f611b997 614 PRINTS PR00762 Chloride channel signature 127 146 1.9E-24 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RB2982 98a60133b13864fb262715c2f611b997 614 PRINTS PR00762 Chloride channel signature 395 411 1.9E-24 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 RB2982 98a60133b13864fb262715c2f611b997 614 SUPERFAMILY SSF81340 13 461 1.15E-96 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 RB2982 98a60133b13864fb262715c2f611b997 614 Gene3D G3DSA:3.10.580.10 475 595 1.2E-22 T 11-11-2016 RB2982 98a60133b13864fb262715c2f611b997 614 SMART SM00116 551 601 0.19 T 11-11-2016 IPR000644 CBS domain RB2982 98a60133b13864fb262715c2f611b997 614 SMART SM00116 486 534 0.017 T 11-11-2016 IPR000644 CBS domain RB2982 98a60133b13864fb262715c2f611b997 614 Pfam PF00571 CBS domain 545 594 3.7E-7 T 11-11-2016 IPR000644 CBS domain RB2982 98a60133b13864fb262715c2f611b997 614 Pfam PF00571 CBS domain 477 533 1.6E-8 T 11-11-2016 IPR000644 CBS domain RB2982 98a60133b13864fb262715c2f611b997 614 SUPERFAMILY SSF54631 469 600 6.82E-24 T 11-11-2016 RB12422 10c1bb9ce380044c38dec6f50fe90c8a 190 Gene3D G3DSA:1.20.120.450 29 180 3.3E-27 T 11-11-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RB12422 10c1bb9ce380044c38dec6f50fe90c8a 190 Pfam PF12867 DinB superfamily 51 175 6.3E-12 T 11-11-2016 IPR024775 DinB-like domain RB12422 10c1bb9ce380044c38dec6f50fe90c8a 190 SUPERFAMILY SSF109854 19 176 1.18E-31 T 11-11-2016 RB8966 45c2b28859f85784a21778ffcaee2d40 660 Hamap MF_00600 60 kDa chaperonin [groL]. 90 653 38.171 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8966 45c2b28859f85784a21778ffcaee2d40 660 SUPERFAMILY SSF54849 230 295 6.41E-18 T 11-11-2016 RB8966 45c2b28859f85784a21778ffcaee2d40 660 Gene3D G3DSA:1.10.560.10 92 276 5.7E-40 T 11-11-2016 IPR027413 GroEL-like equatorial domain RB8966 45c2b28859f85784a21778ffcaee2d40 660 Gene3D G3DSA:3.50.7.10 277 458 3.0E-89 T 11-11-2016 IPR027409 GroEL-like apical domain RB8966 45c2b28859f85784a21778ffcaee2d40 660 SUPERFAMILY SSF48592 496 613 1.5E-71 T 11-11-2016 RB8966 45c2b28859f85784a21778ffcaee2d40 660 SUPERFAMILY SSF48592 95 222 1.5E-71 T 11-11-2016 RB8966 45c2b28859f85784a21778ffcaee2d40 660 SUPERFAMILY SSF52029 274 466 1.53E-76 T 11-11-2016 IPR027409 GroEL-like apical domain RB8966 45c2b28859f85784a21778ffcaee2d40 660 TIGRFAM TIGR02348 GroEL: chaperonin GroL 91 617 4.6E-231 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8966 45c2b28859f85784a21778ffcaee2d40 660 Pfam PF00118 TCP-1/cpn60 chaperonin family 111 615 2.1E-92 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RB8966 45c2b28859f85784a21778ffcaee2d40 660 PRINTS PR00298 60kDa chaperonin signature 358 381 2.7E-69 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8966 45c2b28859f85784a21778ffcaee2d40 660 PRINTS PR00298 60kDa chaperonin signature 115 141 2.7E-69 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8966 45c2b28859f85784a21778ffcaee2d40 660 PRINTS PR00298 60kDa chaperonin signature 440 465 2.7E-69 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8966 45c2b28859f85784a21778ffcaee2d40 660 PRINTS PR00298 60kDa chaperonin signature 171 198 2.7E-69 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8966 45c2b28859f85784a21778ffcaee2d40 660 PRINTS PR00298 60kDa chaperonin signature 488 509 2.7E-69 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 RB8966 45c2b28859f85784a21778ffcaee2d40 660 Gene3D G3DSA:1.10.560.10 459 610 1.2E-37 T 11-11-2016 IPR027413 GroEL-like equatorial domain RB13155 0c9d12c411d5d418b4f2f9d8b5acbe83 500 ProSitePatterns PS00523 Sulfatases signature 1. 119 131 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB13155 0c9d12c411d5d418b4f2f9d8b5acbe83 500 Gene3D G3DSA:3.30.1120.10 419 477 1.1E-14 T 11-11-2016 RB13155 0c9d12c411d5d418b4f2f9d8b5acbe83 500 Gene3D G3DSA:3.40.720.10 72 418 9.7E-108 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB13155 0c9d12c411d5d418b4f2f9d8b5acbe83 500 ProSitePatterns PS00149 Sulfatases signature 2. 166 176 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB13155 0c9d12c411d5d418b4f2f9d8b5acbe83 500 SUPERFAMILY SSF53649 72 476 2.47E-122 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB13155 0c9d12c411d5d418b4f2f9d8b5acbe83 500 Pfam PF00884 Sulfatase 73 380 7.2E-72 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB844 921fa5baf00ffe7e4ea0a244e6478c33 1543 SUPERFAMILY SSF117074 1315 1375 1.24E-7 T 11-11-2016 RB844 921fa5baf00ffe7e4ea0a244e6478c33 1543 SUPERFAMILY SSF63446 94 155 3.34E-5 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB844 921fa5baf00ffe7e4ea0a244e6478c33 1543 Pfam PF07595 Planctomycete extracellular 44 66 1.0E-4 T 11-11-2016 IPR011506 Planctomycete extracellular RB844 921fa5baf00ffe7e4ea0a244e6478c33 1543 Gene3D G3DSA:2.60.40.10 1314 1377 6.1E-8 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB844 921fa5baf00ffe7e4ea0a244e6478c33 1543 Pfam PF00404 Dockerin type I repeat 95 115 1.7E-4 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB11314 f5f90f2aff7ee8bd8a6ea1fe2216d049 302 SUPERFAMILY SSF54631 57 152 2.92E-5 T 11-11-2016 RB11314 f5f90f2aff7ee8bd8a6ea1fe2216d049 302 Gene3D G3DSA:3.10.580.10 93 150 4.1E-4 T 11-11-2016 RB5285 e958c4af815487307e414819848a8942 78 Gene3D G3DSA:2.60.120.200 12 61 3.4E-5 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5285 e958c4af815487307e414819848a8942 78 SUPERFAMILY SSF49899 16 65 4.57E-6 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5285 e958c4af815487307e414819848a8942 78 Pfam PF06439 Domain of Unknown Function (DUF1080) 9 74 8.1E-7 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB8932 f443c25e0e562a57ab6a0a834ccb3fd4 269 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 24 233 7.2E-43 T 11-11-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated RB8932 f443c25e0e562a57ab6a0a834ccb3fd4 269 SUPERFAMILY SSF53448 24 241 2.19E-26 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB8932 f443c25e0e562a57ab6a0a834ccb3fd4 269 Gene3D G3DSA:3.90.550.10 24 170 7.0E-20 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB8932 f443c25e0e562a57ab6a0a834ccb3fd4 269 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 85 167 8.5E-21 T 11-11-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated RB195 bd9804b3da5158e91deba08eaa9de315 566 Pfam PF07396 Phosphate-selective porin O and P 189 547 6.5E-37 T 11-11-2016 IPR010870 Phosphate-selective porin O/P RB195 bd9804b3da5158e91deba08eaa9de315 566 Gene3D G3DSA:2.40.160.10 150 566 1.1E-103 T 11-11-2016 IPR023614 Porin domain RB195 bd9804b3da5158e91deba08eaa9de315 566 SUPERFAMILY SSF56935 154 447 2.93E-7 T 11-11-2016 RB195 bd9804b3da5158e91deba08eaa9de315 566 SUPERFAMILY SSF56935 484 540 2.93E-7 T 11-11-2016 RB7360 547481bfdaadc88d93a62a1b1205fe9d 428 Pfam PF02154 Flagellar motor switch protein FliM 79 269 3.2E-58 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RB7360 547481bfdaadc88d93a62a1b1205fe9d 428 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 294 364 2.1E-14 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) RB7360 547481bfdaadc88d93a62a1b1205fe9d 428 SUPERFAMILY SSF101801 292 366 1.19E-12 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) RB7360 547481bfdaadc88d93a62a1b1205fe9d 428 Gene3D G3DSA:2.30.330.10 284 367 4.3E-11 T 11-11-2016 RB7360 547481bfdaadc88d93a62a1b1205fe9d 428 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 74 364 3.2E-79 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 RB7360 547481bfdaadc88d93a62a1b1205fe9d 428 SUPERFAMILY SSF103039 85 270 1.02E-22 T 11-11-2016 IPR028976 CheC-like domain RB7750 0e9afabfd9bd70b2ff4f0cf40fba2adf 580 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 439 576 1.1E-24 T 11-11-2016 IPR018760 Protein of unknown function DUF2326 RB7750 0e9afabfd9bd70b2ff4f0cf40fba2adf 580 Gene3D G3DSA:3.40.50.300 18 132 5.2E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2737 7c4ff5cb0bd0981a4250ead5689074b0 380 Pfam PF14080 Domain of unknown function (DUF4261) 236 313 4.1E-16 T 11-11-2016 IPR025357 Domain of unknown function DUF4261 RB11607 7a5a97e951cdc7985e7f59083c5c4efc 502 Pfam PF03983 SLA1 homology domain 1, SHD1 431 488 8.4E-12 T 11-11-2016 IPR007131 SLA1 homology domain 1, SHD1 GO:0008092|GO:0030674|GO:0042802|GO:0043130 RB11607 7a5a97e951cdc7985e7f59083c5c4efc 502 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 430 487 0.001 T 11-11-2016 RB2991 82134a899c04c5e3709286871a2d8a99 391 SUPERFAMILY SSF75005 44 84 1.01E-68 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB2991 82134a899c04c5e3709286871a2d8a99 391 SUPERFAMILY SSF75005 133 374 1.01E-68 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB2991 82134a899c04c5e3709286871a2d8a99 391 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 140 386 1.0E-48 T 11-11-2016 IPR007184 Mannoside phosphorylase RB2991 82134a899c04c5e3709286871a2d8a99 391 PIRSF PIRSF016202 11 390 5.6E-82 T 11-11-2016 IPR007184 Mannoside phosphorylase RB2991 82134a899c04c5e3709286871a2d8a99 391 Gene3D G3DSA:2.115.10.20 134 387 1.6E-92 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB2991 82134a899c04c5e3709286871a2d8a99 391 Gene3D G3DSA:2.115.10.20 28 85 1.6E-92 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB8806 3ad3d801af8d2ee07aeafb2c2b2a1bdc 175 SUPERFAMILY SSF55620 23 169 3.5E-35 T 11-11-2016 RB8806 3ad3d801af8d2ee07aeafb2c2b2a1bdc 175 Gene3D G3DSA:3.30.479.10 22 170 6.5E-37 T 11-11-2016 RB8806 3ad3d801af8d2ee07aeafb2c2b2a1bdc 175 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 22 167 1.9E-22 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RB10538 f59cee65df9bf61df58544e5065a3797 326 Pfam PF06230 Protein of unknown function (DUF1009) 90 307 3.5E-71 T 11-11-2016 IPR010415 Protein of unknown function DUF1009 RB6607 337838eb6b8b17bbb9410c434312b171 216 SUPERFAMILY SSF52540 17 213 1.4E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6607 337838eb6b8b17bbb9410c434312b171 216 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 18 202 4.2E-31 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 RB6607 337838eb6b8b17bbb9410c434312b171 216 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 16 215 20.413 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 RB6607 337838eb6b8b17bbb9410c434312b171 216 Pfam PF01121 Dephospho-CoA kinase 18 198 4.8E-30 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 RB6607 337838eb6b8b17bbb9410c434312b171 216 Gene3D G3DSA:3.40.50.300 12 213 3.4E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 SMART SM00028 332 365 0.078 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 SMART SM00028 179 212 210.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 Pfam PF07593 ASPIC and UnbV 971 1036 5.4E-14 T 11-11-2016 IPR011519 ASPIC/UnbV RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 Pfam PF13432 Tetratricopeptide repeat 116 166 0.011 T 11-11-2016 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 SUPERFAMILY SSF69318 538 948 8.24E-44 T 11-11-2016 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 Gene3D G3DSA:1.25.40.10 116 229 6.4E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 Gene3D G3DSA:1.25.40.10 334 431 6.4E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 Gene3D G3DSA:2.130.10.130 764 948 4.8E-26 T 11-11-2016 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 Gene3D G3DSA:2.130.10.130 527 673 4.8E-26 T 11-11-2016 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 609 668 1.3E-10 T 11-11-2016 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 SUPERFAMILY SSF48452 117 241 2.43E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9156 42ab8b5feec5b4ad9b35a522c29d11be 1053 SUPERFAMILY SSF48452 327 391 2.43E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6259 0ca6a78b1c11c7586188fa9ebb34e968 276 Pfam PF01618 MotA/TolQ/ExbB proton channel family 104 222 2.2E-25 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RB11288 051b47d015b0c939c30b4e4df9fe1241 271 Pfam PF10020 Uncharacterized protein conserved in bacteria (DUF2262) 137 269 3.7E-33 T 11-11-2016 IPR019260 Domain of unknown function DUF2262 RB11288 051b47d015b0c939c30b4e4df9fe1241 271 PIRSF PIRSF033642 2 271 5.8E-101 T 11-11-2016 IPR024198 Uncharacterised conserved protein, UCP033642 RB13231 928068a9acd0f1852a754a6779748796 352 Gene3D G3DSA:3.40.630.10 12 80 2.1E-16 T 11-11-2016 RB13231 928068a9acd0f1852a754a6779748796 352 Gene3D G3DSA:3.40.630.10 170 347 2.1E-16 T 11-11-2016 RB13231 928068a9acd0f1852a754a6779748796 352 Pfam PF05343 M42 glutamyl aminopeptidase 156 342 1.2E-8 T 11-11-2016 IPR008007 Peptidase M42 RB13231 928068a9acd0f1852a754a6779748796 352 SUPERFAMILY SSF53187 171 347 8.87E-16 T 11-11-2016 RB13231 928068a9acd0f1852a754a6779748796 352 SUPERFAMILY SSF53187 11 78 8.87E-16 T 11-11-2016 RB3601 7f9b88607c8d4807043bd8a9462aaf0d 243 Pfam PF08787 Alginate lyase 26 236 3.2E-44 T 11-11-2016 IPR014895 Alginate lyase 2 RB3601 7f9b88607c8d4807043bd8a9462aaf0d 243 SUPERFAMILY SSF49899 26 236 7.12E-52 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB3601 7f9b88607c8d4807043bd8a9462aaf0d 243 Gene3D G3DSA:2.60.120.200 20 236 1.3E-58 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5081 4741d2707db6691bc8eec13102b8ce7d 197 Pfam PF04542 Sigma-70 region 2 32 96 1.9E-11 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5081 4741d2707db6691bc8eec13102b8ce7d 197 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 26 182 1.0E-47 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB5081 4741d2707db6691bc8eec13102b8ce7d 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 179 5.7E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5081 4741d2707db6691bc8eec13102b8ce7d 197 SUPERFAMILY SSF88946 25 107 1.92E-17 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5081 4741d2707db6691bc8eec13102b8ce7d 197 Gene3D G3DSA:1.10.10.10 124 183 1.3E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB5081 4741d2707db6691bc8eec13102b8ce7d 197 SUPERFAMILY SSF88659 128 184 2.24E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5081 4741d2707db6691bc8eec13102b8ce7d 197 Gene3D G3DSA:1.10.1740.10 17 112 4.9E-17 T 11-11-2016 RB5081 4741d2707db6691bc8eec13102b8ce7d 197 Pfam PF08281 Sigma-70, region 4 126 178 1.9E-9 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8768 782c9646f208989130577ad32f8b0e89 347 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 67 197 2.7E-64 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB8768 782c9646f208989130577ad32f8b0e89 347 SUPERFAMILY SSF52540 37 320 2.56E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8768 782c9646f208989130577ad32f8b0e89 347 Gene3D G3DSA:3.40.50.300 49 213 1.1E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8768 782c9646f208989130577ad32f8b0e89 347 SMART SM00382 64 205 0.0036 T 11-11-2016 IPR003593 AAA+ ATPase domain RB8768 782c9646f208989130577ad32f8b0e89 347 PIRSF PIRSF002849 6 347 2.7E-133 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB8768 782c9646f208989130577ad32f8b0e89 347 Gene3D G3DSA:1.10.8.300 228 343 1.9E-38 T 11-11-2016 RB4137 76994342bd3d755023945c6278a11923 470 SMART SM00387 361 470 1.8E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4137 76994342bd3d755023945c6278a11923 470 Gene3D G3DSA:3.30.565.10 326 469 5.0E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4137 76994342bd3d755023945c6278a11923 470 SUPERFAMILY SSF47384 254 317 3.34E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4137 76994342bd3d755023945c6278a11923 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 1.2E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4137 76994342bd3d755023945c6278a11923 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 1.2E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4137 76994342bd3d755023945c6278a11923 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 1.2E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB4137 76994342bd3d755023945c6278a11923 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 314 1.5E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4137 76994342bd3d755023945c6278a11923 470 Gene3D G3DSA:1.10.287.130 253 314 3.0E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4137 76994342bd3d755023945c6278a11923 470 SMART SM00388 254 319 5.8E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB4137 76994342bd3d755023945c6278a11923 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 454 2.4E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4137 76994342bd3d755023945c6278a11923 470 SUPERFAMILY SSF55874 328 467 3.01E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4131 40313100a982eb9bd966961e12ec5512 342 Pfam PF00107 Zinc-binding dehydrogenase 171 301 4.3E-21 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB4131 40313100a982eb9bd966961e12ec5512 342 SUPERFAMILY SSF50129 1 168 1.32E-44 T 11-11-2016 IPR011032 GroES-like RB4131 40313100a982eb9bd966961e12ec5512 342 SMART SM00829 10 339 0.001 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB4131 40313100a982eb9bd966961e12ec5512 342 Gene3D G3DSA:3.90.180.10 1 163 6.9E-49 T 11-11-2016 IPR011032 GroES-like RB4131 40313100a982eb9bd966961e12ec5512 342 Gene3D G3DSA:3.40.50.720 164 284 1.2E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4131 40313100a982eb9bd966961e12ec5512 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 2.1E-29 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB4131 40313100a982eb9bd966961e12ec5512 342 SUPERFAMILY SSF51735 134 306 2.45E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 Gene3D G3DSA:3.40.50.1980 213 339 2.6E-42 T 11-11-2016 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00691 Adhesin B signature 220 237 8.1E-21 T 11-11-2016 IPR006129 Adhesin B GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00691 Adhesin B signature 88 106 8.1E-21 T 11-11-2016 IPR006129 Adhesin B GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00691 Adhesin B signature 63 84 8.1E-21 T 11-11-2016 IPR006129 Adhesin B GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00691 Adhesin B signature 296 314 8.1E-21 T 11-11-2016 IPR006129 Adhesin B GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00691 Adhesin B signature 107 126 8.1E-21 T 11-11-2016 IPR006129 Adhesin B GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00691 Adhesin B signature 317 335 8.1E-21 T 11-11-2016 IPR006129 Adhesin B GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 SUPERFAMILY SSF53807 62 339 1.18E-77 T 11-11-2016 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 Pfam PF01297 Zinc-uptake complex component A periplasmic 66 336 2.3E-68 T 11-11-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00690 Adhesin family signature 304 323 3.0E-40 T 11-11-2016 IPR006128 Adhesion lipoprotein GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00690 Adhesin family signature 107 124 3.0E-40 T 11-11-2016 IPR006128 Adhesion lipoprotein GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00690 Adhesin family signature 63 81 3.0E-40 T 11-11-2016 IPR006128 Adhesion lipoprotein GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00690 Adhesin family signature 94 107 3.0E-40 T 11-11-2016 IPR006128 Adhesion lipoprotein GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00690 Adhesin family signature 220 241 3.0E-40 T 11-11-2016 IPR006128 Adhesion lipoprotein GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 PRINTS PR00690 Adhesin family signature 273 291 3.0E-40 T 11-11-2016 IPR006128 Adhesion lipoprotein GO:0007155 RB12440 8ce38a1bab3a5c5e34ecfe5be8316ff7 366 Gene3D G3DSA:3.40.50.1980 54 212 8.0E-43 T 11-11-2016 RB8455 57f9639a91c34e207ccd29e46ba71b1c 214 SUPERFAMILY SSF52374 13 213 2.64E-50 T 11-11-2016 RB8455 57f9639a91c34e207ccd29e46ba71b1c 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 14 74 6.4E-12 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RB8455 57f9639a91c34e207ccd29e46ba71b1c 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 12 212 29.76 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 RB8455 57f9639a91c34e207ccd29e46ba71b1c 214 Gene3D G3DSA:3.40.50.620 14 212 7.9E-61 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8455 57f9639a91c34e207ccd29e46ba71b1c 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 16 211 4.6E-51 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 RB8455 57f9639a91c34e207ccd29e46ba71b1c 214 Pfam PF01467 Cytidylyltransferase-like 16 186 9.0E-31 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RB11015 da17ae256d201e59fcb6460afcfd9aeb 362 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 27 47 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11015 da17ae256d201e59fcb6460afcfd9aeb 362 Pfam PF13633 Prokaryotic N-terminal methylation site 27 52 4.5E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11015 da17ae256d201e59fcb6460afcfd9aeb 362 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 26 48 7.2E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11015 da17ae256d201e59fcb6460afcfd9aeb 362 SUPERFAMILY SSF54523 29 155 3.77E-21 T 11-11-2016 RB11015 da17ae256d201e59fcb6460afcfd9aeb 362 Pfam PF07596 Protein of unknown function (DUF1559) 53 343 3.5E-73 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB11015 da17ae256d201e59fcb6460afcfd9aeb 362 Gene3D G3DSA:3.30.700.10 29 83 5.3E-7 T 11-11-2016 RB5801 4f272ed7345146d7d1bc0bb5d0cceae9 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 5.0E-29 T 11-11-2016 RB5801 4f272ed7345146d7d1bc0bb5d0cceae9 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.6E-36 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB5801 4f272ed7345146d7d1bc0bb5d0cceae9 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-34 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB5801 4f272ed7345146d7d1bc0bb5d0cceae9 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.065 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB5801 4f272ed7345146d7d1bc0bb5d0cceae9 89 Gene3D G3DSA:1.10.287.10 3 89 2.3E-36 T 11-11-2016 IPR009068 S15/NS1, RNA-binding RB5801 4f272ed7345146d7d1bc0bb5d0cceae9 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB5801 4f272ed7345146d7d1bc0bb5d0cceae9 89 SMART SM01387 8 88 2.1E-48 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB5801 4f272ed7345146d7d1bc0bb5d0cceae9 89 SUPERFAMILY SSF47060 3 89 2.8E-33 T 11-11-2016 IPR009068 S15/NS1, RNA-binding RB6237 7d81893f3b476d4ecabdd9bc8ff7fcc2 543 Pfam PF02875 Mur ligase family, glutamate ligase domain 384 453 8.5E-8 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RB6237 7d81893f3b476d4ecabdd9bc8ff7fcc2 543 Gene3D G3DSA:3.40.1190.10 39 81 2.6E-88 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB6237 7d81893f3b476d4ecabdd9bc8ff7fcc2 543 Gene3D G3DSA:3.40.1190.10 119 381 2.6E-88 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB6237 7d81893f3b476d4ecabdd9bc8ff7fcc2 543 SUPERFAMILY SSF53623 118 361 3.85E-74 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB6237 7d81893f3b476d4ecabdd9bc8ff7fcc2 543 Pfam PF08245 Mur ligase middle domain 126 356 1.1E-8 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RB6237 7d81893f3b476d4ecabdd9bc8ff7fcc2 543 TIGRFAM TIGR01499 folC: bifunctional protein FolC 112 519 1.2E-96 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 RB6237 7d81893f3b476d4ecabdd9bc8ff7fcc2 543 Gene3D G3DSA:3.90.190.20 385 521 1.0E-27 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RB6237 7d81893f3b476d4ecabdd9bc8ff7fcc2 543 SUPERFAMILY SSF53244 385 522 9.71E-26 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RB3237 ba4dcd29b8b3bbb95385227b1323f14c 149 SUPERFAMILY SSF102546 1 145 1.7E-29 T 11-11-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RB3237 ba4dcd29b8b3bbb95385227b1323f14c 149 Gene3D G3DSA:3.40.1650.10 2 147 1.3E-33 T 11-11-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RB3237 ba4dcd29b8b3bbb95385227b1323f14c 149 Pfam PF05025 RbsD / FucU transport protein family 1 145 4.1E-30 T 11-11-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RB9313 d8ca3dc87506e332fa030234e4b6405c 376 Gene3D G3DSA:2.40.50.100 55 128 8.4E-4 T 11-11-2016 RB9313 d8ca3dc87506e332fa030234e4b6405c 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 213 360 1.5E-16 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB9313 d8ca3dc87506e332fa030234e4b6405c 376 Gene3D G3DSA:2.40.50.100 255 287 8.2E-12 T 11-11-2016 RB9313 d8ca3dc87506e332fa030234e4b6405c 376 SUPERFAMILY SSF111369 194 367 1.96E-12 T 11-11-2016 RB9313 d8ca3dc87506e332fa030234e4b6405c 376 Pfam PF13533 Biotin-lipoyl like 57 97 9.6E-6 T 11-11-2016 RB934 c40a3d99dd57e56fc9f504449fef4f5a 375 Pfam PF14319 Transposase zinc-binding domain 7 114 9.2E-35 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB934 c40a3d99dd57e56fc9f504449fef4f5a 375 Pfam PF04986 Putative transposase 141 312 2.6E-50 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB5305 0da88b37fbf4f5eed02a698dfee26592 458 Gene3D G3DSA:3.40.720.10 21 386 7.8E-89 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5305 0da88b37fbf4f5eed02a698dfee26592 458 SUPERFAMILY SSF53649 22 434 3.49E-93 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5305 0da88b37fbf4f5eed02a698dfee26592 458 Pfam PF00884 Sulfatase 23 340 4.6E-63 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB5756 42d5a23db6ac8785e7c8e065e06c27ad 1329 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 531 595 1.5E-7 T 11-11-2016 RB5756 42d5a23db6ac8785e7c8e065e06c27ad 1329 SUPERFAMILY SSF69318 389 710 3.27E-17 T 11-11-2016 RB5756 42d5a23db6ac8785e7c8e065e06c27ad 1329 Gene3D G3DSA:2.130.10.130 391 708 1.1E-9 T 11-11-2016 RB10014 f81ca0c9cbed4c4368781f2bdfd6a487 534 Pfam PF07586 Protein of unknown function (DUF1552) 137 438 7.0E-79 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB12562 3d50e5969feaa2d733ac92b868dcc03d 420 SMART SM00564 174 207 600.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB12562 3d50e5969feaa2d733ac92b868dcc03d 420 SMART SM00564 124 156 0.0014 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB12562 3d50e5969feaa2d733ac92b868dcc03d 420 SMART SM00564 219 250 38.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB12562 3d50e5969feaa2d733ac92b868dcc03d 420 SMART SM00564 312 350 160.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB12562 3d50e5969feaa2d733ac92b868dcc03d 420 SMART SM00564 73 108 160.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB12562 3d50e5969feaa2d733ac92b868dcc03d 420 Pfam PF13360 PQQ-like domain 91 347 7.1E-32 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB12562 3d50e5969feaa2d733ac92b868dcc03d 420 SUPERFAMILY SSF50998 26 408 1.2E-58 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB12562 3d50e5969feaa2d733ac92b868dcc03d 420 Gene3D G3DSA:2.140.10.10 18 419 1.0E-58 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB159 05f3bb0ca993e1cc761d356628b90e65 993 SUPERFAMILY SSF52172 580 703 3.27E-39 T 11-11-2016 IPR011006 CheY-like superfamily RB159 05f3bb0ca993e1cc761d356628b90e65 993 Gene3D G3DSA:3.30.565.10 366 546 4.8E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB159 05f3bb0ca993e1cc761d356628b90e65 993 Gene3D G3DSA:3.40.50.2300 581 703 7.9E-41 T 11-11-2016 RB159 05f3bb0ca993e1cc761d356628b90e65 993 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 546 6.3E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB159 05f3bb0ca993e1cc761d356628b90e65 993 SUPERFAMILY SSF47226 771 898 9.68E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB159 05f3bb0ca993e1cc761d356628b90e65 993 SUPERFAMILY SSF47226 897 983 7.59E-11 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB159 05f3bb0ca993e1cc761d356628b90e65 993 SUPERFAMILY SSF55874 369 547 7.2E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB159 05f3bb0ca993e1cc761d356628b90e65 993 Gene3D G3DSA:1.20.120.160 769 852 3.0E-13 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB159 05f3bb0ca993e1cc761d356628b90e65 993 SMART SM00387 427 548 1.5E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB159 05f3bb0ca993e1cc761d356628b90e65 993 Pfam PF00512 His Kinase A (phospho-acceptor) domain 313 380 6.8E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB159 05f3bb0ca993e1cc761d356628b90e65 993 Gene3D G3DSA:3.30.450.20 186 291 6.7E-12 T 11-11-2016 RB159 05f3bb0ca993e1cc761d356628b90e65 993 Pfam PF00072 Response regulator receiver domain 584 698 7.4E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB159 05f3bb0ca993e1cc761d356628b90e65 993 Pfam PF01627 Hpt domain 904 978 1.1E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB159 05f3bb0ca993e1cc761d356628b90e65 993 Pfam PF01627 Hpt domain 780 852 8.7E-9 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB159 05f3bb0ca993e1cc761d356628b90e65 993 Pfam PF13426 PAS domain 194 291 4.5E-6 T 11-11-2016 IPR000014 PAS domain RB159 05f3bb0ca993e1cc761d356628b90e65 993 SUPERFAMILY SSF47384 299 381 1.2E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB159 05f3bb0ca993e1cc761d356628b90e65 993 SMART SM00388 313 380 2.9E-22 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB159 05f3bb0ca993e1cc761d356628b90e65 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 526 3.6E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB159 05f3bb0ca993e1cc761d356628b90e65 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 501 3.6E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB159 05f3bb0ca993e1cc761d356628b90e65 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 545 3.6E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB159 05f3bb0ca993e1cc761d356628b90e65 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 3.6E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB159 05f3bb0ca993e1cc761d356628b90e65 993 SMART SM00448 582 698 2.9E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB159 05f3bb0ca993e1cc761d356628b90e65 993 Gene3D G3DSA:1.20.120.160 901 978 1.7E-8 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB159 05f3bb0ca993e1cc761d356628b90e65 993 Gene3D G3DSA:1.10.287.130 306 365 4.3E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB159 05f3bb0ca993e1cc761d356628b90e65 993 SUPERFAMILY SSF55785 186 291 4.19E-8 T 11-11-2016 IPR000014 PAS domain RB5053 81cbbd1d4aca1342abb04dde237c8a88 329 Gene3D G3DSA:3.20.20.150 21 326 1.0E-63 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB5053 81cbbd1d4aca1342abb04dde237c8a88 329 SUPERFAMILY SSF51658 24 327 1.7E-57 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB5053 81cbbd1d4aca1342abb04dde237c8a88 329 Pfam PF01261 Xylose isomerase-like TIM barrel 42 252 3.4E-39 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB3786 708ec2478777d0c233e891911f7c22d0 887 Pfam PF12679 ABC-2 family transporter protein 42 400 2.9E-14 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 RB390 e82ca91ecc45abbd08ff21ae9f166c13 462 Pfam PF01494 FAD binding domain 37 345 6.6E-14 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 RB390 e82ca91ecc45abbd08ff21ae9f166c13 462 Gene3D G3DSA:3.50.50.60 31 219 8.6E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB390 e82ca91ecc45abbd08ff21ae9f166c13 462 Gene3D G3DSA:3.50.50.60 317 360 8.6E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB390 e82ca91ecc45abbd08ff21ae9f166c13 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 59 5.9E-5 T 11-11-2016 RB390 e82ca91ecc45abbd08ff21ae9f166c13 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 197 206 5.9E-5 T 11-11-2016 RB390 e82ca91ecc45abbd08ff21ae9f166c13 462 SUPERFAMILY SSF51905 33 220 2.73E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB390 e82ca91ecc45abbd08ff21ae9f166c13 462 SUPERFAMILY SSF51905 322 397 2.73E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB168 c0b22aefb1c2173b4d5beaeb1ada4e01 138 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 42 87 4.2E-12 T 11-11-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RB11150 91bcfe8a7e250a19bb5e6a79c9aaf150 385 SUPERFAMILY SSF51395 14 375 6.19E-123 T 11-11-2016 RB11150 91bcfe8a7e250a19bb5e6a79c9aaf150 385 Gene3D G3DSA:3.20.20.70 14 373 3.4E-130 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB11150 91bcfe8a7e250a19bb5e6a79c9aaf150 385 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 18 348 5.3E-87 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RB4540 716d72260cd449a4e58d200e1e757756 478 Pfam PF02321 Outer membrane efflux protein 297 472 1.3E-23 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB4540 716d72260cd449a4e58d200e1e757756 478 Pfam PF02321 Outer membrane efflux protein 100 269 1.2E-10 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB4540 716d72260cd449a4e58d200e1e757756 478 Gene3D G3DSA:1.20.1600.10 92 473 6.1E-51 T 11-11-2016 RB4540 716d72260cd449a4e58d200e1e757756 478 SUPERFAMILY SSF56954 89 472 1.96E-58 T 11-11-2016 RB10378 bcfa6bfe53717b64509651838544bf5e 144 Pfam PF00085 Thioredoxin 56 142 3.5E-23 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 RB10378 bcfa6bfe53717b64509651838544bf5e 144 SUPERFAMILY SSF52833 33 143 8.09E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold RB10378 bcfa6bfe53717b64509651838544bf5e 144 Gene3D G3DSA:3.40.30.10 43 143 2.5E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 Pfam PF00005 ABC transporter 63 220 3.0E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 Pfam PF00005 ABC transporter 326 479 6.3E-20 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 Gene3D G3DSA:3.40.50.300 310 542 7.2E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 Gene3D G3DSA:3.40.50.300 41 276 2.8E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 SMART SM00382 333 528 1.4E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 SMART SM00382 72 303 1.1E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 SUPERFAMILY SSF52540 47 277 6.35E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10181 804a7a543a6ec6f2e2bc5164f801fe5f 555 SUPERFAMILY SSF52540 321 541 2.38E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6756 ca7d7b1df2c2172568df37256a5cc2f9 347 SUPERFAMILY SSF56059 148 344 7.41E-39 T 11-11-2016 RB6756 ca7d7b1df2c2172568df37256a5cc2f9 347 Gene3D G3DSA:3.30.470.20 233 329 2.5E-15 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB6756 ca7d7b1df2c2172568df37256a5cc2f9 347 Pfam PF08443 RimK-like ATP-grasp domain 158 341 3.9E-18 T 11-11-2016 IPR013651 ATP-grasp fold, RimK-type RB6756 ca7d7b1df2c2172568df37256a5cc2f9 347 Gene3D G3DSA:3.30.1490.20 171 232 5.1E-10 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB6756 ca7d7b1df2c2172568df37256a5cc2f9 347 Gene3D G3DSA:3.40.50.20 47 170 2.8E-7 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB161 0b383301a21786cc0bd09c9897997764 418 SUPERFAMILY SSF109604 181 280 5.34E-38 T 11-11-2016 RB161 0b383301a21786cc0bd09c9897997764 418 SUPERFAMILY SSF109604 316 391 5.34E-38 T 11-11-2016 RB161 0b383301a21786cc0bd09c9897997764 418 Gene3D G3DSA:1.10.3210.10 202 385 2.2E-17 T 11-11-2016 IPR006674 HD domain RB161 0b383301a21786cc0bd09c9897997764 418 Pfam PF13487 HD domain 281 341 4.6E-15 T 11-11-2016 RB161 0b383301a21786cc0bd09c9897997764 418 SUPERFAMILY SSF52172 40 192 3.56E-37 T 11-11-2016 IPR011006 CheY-like superfamily RB161 0b383301a21786cc0bd09c9897997764 418 Gene3D G3DSA:3.40.50.2300 40 168 1.7E-35 T 11-11-2016 RB161 0b383301a21786cc0bd09c9897997764 418 SMART SM00471 202 360 9.6E-10 T 11-11-2016 IPR003607 HD/PDEase domain RB161 0b383301a21786cc0bd09c9897997764 418 SMART SM00448 39 153 7.6E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB161 0b383301a21786cc0bd09c9897997764 418 Pfam PF00072 Response regulator receiver domain 41 153 1.4E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB9215 12f1fd03bee89700d45718fd35bd0096 435 Gene3D G3DSA:2.40.50.100 3 85 1.0E-22 T 11-11-2016 RB9215 12f1fd03bee89700d45718fd35bd0096 435 SUPERFAMILY SSF52777 205 434 5.34E-82 T 11-11-2016 RB9215 12f1fd03bee89700d45718fd35bd0096 435 SUPERFAMILY SSF47005 121 165 1.31E-10 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RB9215 12f1fd03bee89700d45718fd35bd0096 435 Gene3D G3DSA:4.10.320.10 127 166 2.1E-17 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RB9215 12f1fd03bee89700d45718fd35bd0096 435 Pfam PF02817 e3 binding domain 126 160 2.0E-11 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RB9215 12f1fd03bee89700d45718fd35bd0096 435 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 205 433 9.8E-74 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RB9215 12f1fd03bee89700d45718fd35bd0096 435 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 6 435 1.9E-147 T 11-11-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RB9215 12f1fd03bee89700d45718fd35bd0096 435 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RB9215 12f1fd03bee89700d45718fd35bd0096 435 SUPERFAMILY SSF51230 4 89 1.31E-21 T 11-11-2016 IPR011053 Single hybrid motif RB9215 12f1fd03bee89700d45718fd35bd0096 435 Pfam PF00364 Biotin-requiring enzyme 7 78 1.4E-16 T 11-11-2016 IPR000089 Biotin/lipoyl attachment RB9215 12f1fd03bee89700d45718fd35bd0096 435 Gene3D G3DSA:3.30.559.10 204 433 8.6E-84 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 73 191 1.7E-16 T 11-11-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 SMART SM00480 89 438 8.6E-54 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 Pfam PF02767 DNA polymerase III beta subunit, central domain 201 319 3.1E-18 T 11-11-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 Gene3D G3DSA:3.10.150.10 328 440 2.9E-24 T 11-11-2016 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 SUPERFAMILY SSF55979 199 320 2.0E-18 T 11-11-2016 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 SUPERFAMILY SSF55979 322 440 2.16E-20 T 11-11-2016 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 Gene3D G3DSA:3.10.150.10 198 324 3.9E-25 T 11-11-2016 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 Gene3D G3DSA:3.10.150.10 72 192 2.0E-18 T 11-11-2016 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 SUPERFAMILY SSF55979 73 191 3.31E-15 T 11-11-2016 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 321 440 4.4E-16 T 11-11-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB10108 e9d7cb8f2c8681484acecd8a27543df2 444 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 73 441 8.4E-68 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB2983 b37cb02ec11215dbac175a514dcf7b26 293 Gene3D G3DSA:3.40.190.10 173 264 1.2E-22 T 11-11-2016 RB2983 b37cb02ec11215dbac175a514dcf7b26 293 SUPERFAMILY SSF46785 1 109 4.93E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2983 b37cb02ec11215dbac175a514dcf7b26 293 SUPERFAMILY SSF53850 85 291 2.11E-42 T 11-11-2016 RB2983 b37cb02ec11215dbac175a514dcf7b26 293 Gene3D G3DSA:3.40.190.10 86 172 1.6E-25 T 11-11-2016 RB2983 b37cb02ec11215dbac175a514dcf7b26 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-21 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB2983 b37cb02ec11215dbac175a514dcf7b26 293 Gene3D G3DSA:1.10.10.10 1 84 1.1E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2983 b37cb02ec11215dbac175a514dcf7b26 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB2983 b37cb02ec11215dbac175a514dcf7b26 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB2983 b37cb02ec11215dbac175a514dcf7b26 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB2983 b37cb02ec11215dbac175a514dcf7b26 293 Pfam PF03466 LysR substrate binding domain 85 286 2.8E-48 T 11-11-2016 IPR005119 LysR, substrate-binding RB1759 725cf1c18eefb6018555092e95c8ee2f 432 Pfam PF01966 HD domain 255 375 4.8E-23 T 11-11-2016 IPR006674 HD domain RB1759 725cf1c18eefb6018555092e95c8ee2f 432 Gene3D G3DSA:1.10.3210.10 241 410 1.9E-29 T 11-11-2016 IPR006674 HD domain RB1759 725cf1c18eefb6018555092e95c8ee2f 432 SMART SM00471 249 384 1.6E-12 T 11-11-2016 IPR003607 HD/PDEase domain RB1759 725cf1c18eefb6018555092e95c8ee2f 432 SUPERFAMILY SSF109604 231 412 6.96E-39 T 11-11-2016 RB1759 725cf1c18eefb6018555092e95c8ee2f 432 TIGRFAM TIGR00277 HDIG: HDIG domain 254 343 1.6E-7 T 11-11-2016 IPR006675 HDIG domain RB24 ecf2898b123b7aea738b3f5ba86bd581 934 Gene3D G3DSA:1.10.760.10 894 917 3.6E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB24 ecf2898b123b7aea738b3f5ba86bd581 934 Gene3D G3DSA:1.10.760.10 771 855 3.6E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB24 ecf2898b123b7aea738b3f5ba86bd581 934 SUPERFAMILY SSF46626 781 855 6.26E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB24 ecf2898b123b7aea738b3f5ba86bd581 934 SUPERFAMILY SSF46626 894 917 6.26E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB24 ecf2898b123b7aea738b3f5ba86bd581 934 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 783 917 1.1E-27 T 11-11-2016 IPR013427 Haem-binding domain, putative RB24 ecf2898b123b7aea738b3f5ba86bd581 934 Gene3D G3DSA:2.120.10.30 118 485 2.1E-39 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB24 ecf2898b123b7aea738b3f5ba86bd581 934 SUPERFAMILY SSF50952 128 471 2.35E-26 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB24 ecf2898b123b7aea738b3f5ba86bd581 934 Pfam PF00034 Cytochrome c 785 917 4.4E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4826 9b0bc672231df48c4608b7e501a4c278 464 Pfam PF03050 Transposase IS66 family 157 422 5.5E-42 T 11-11-2016 IPR004291 Transposase, IS66 RB11303 9b0bc672231df48c4608b7e501a4c278 464 Pfam PF03050 Transposase IS66 family 157 422 5.5E-42 T 11-11-2016 IPR004291 Transposase, IS66 RB10834 c67b083eab054b4a9716bcd02dafe546 660 Pfam PF14698 Argininosuccinate lyase C-terminal 565 632 1.5E-15 T 11-11-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB10834 c67b083eab054b4a9716bcd02dafe546 660 ProSitePatterns PS00163 Fumarate lyases signature. 477 486 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00149 Fumarate lyase superfamily signature 304 322 4.0E-20 T 11-11-2016 IPR000362 Fumarate lyase family RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00149 Fumarate lyase superfamily signature 433 460 4.0E-20 T 11-11-2016 IPR000362 Fumarate lyase family RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00149 Fumarate lyase superfamily signature 477 493 4.0E-20 T 11-11-2016 IPR000362 Fumarate lyase family RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00149 Fumarate lyase superfamily signature 349 367 4.0E-20 T 11-11-2016 IPR000362 Fumarate lyase family RB10834 c67b083eab054b4a9716bcd02dafe546 660 Gene3D G3DSA:1.10.40.30 576 632 2.1E-20 T 11-11-2016 RB10834 c67b083eab054b4a9716bcd02dafe546 660 Pfam PF00206 Lyase 208 502 5.6E-64 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal RB10834 c67b083eab054b4a9716bcd02dafe546 660 Gene3D G3DSA:1.20.200.10 309 575 3.3E-88 T 11-11-2016 RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00145 Argininosuccinate lyase family signature 344 364 1.3E-52 T 11-11-2016 RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00145 Argininosuccinate lyase family signature 395 411 1.3E-52 T 11-11-2016 RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00145 Argininosuccinate lyase family signature 512 531 1.3E-52 T 11-11-2016 RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00145 Argininosuccinate lyase family signature 303 325 1.3E-52 T 11-11-2016 RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00145 Argininosuccinate lyase family signature 477 493 1.3E-52 T 11-11-2016 RB10834 c67b083eab054b4a9716bcd02dafe546 660 PRINTS PR00145 Argininosuccinate lyase family signature 433 457 1.3E-52 T 11-11-2016 RB10834 c67b083eab054b4a9716bcd02dafe546 660 TIGRFAM TIGR00838 argH: argininosuccinate lyase 206 657 3.4E-162 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB10834 c67b083eab054b4a9716bcd02dafe546 660 SUPERFAMILY SSF48557 210 659 2.04E-127 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 RB10834 c67b083eab054b4a9716bcd02dafe546 660 Hamap MF_00006 Argininosuccinate lyase [argH]. 204 655 37.828 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RB10834 c67b083eab054b4a9716bcd02dafe546 660 Gene3D G3DSA:1.10.275.10 207 308 1.3E-33 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal RB7673 8893bb2802f415ff7aa1c7439f868636 524 Pfam PF01957 NfeD-like C-terminal, partner-binding 356 523 1.1E-8 T 11-11-2016 IPR002810 NfeD-like, C-terminal domain RB7673 8893bb2802f415ff7aa1c7439f868636 524 SUPERFAMILY SSF52096 64 207 5.81E-18 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB7673 8893bb2802f415ff7aa1c7439f868636 524 Gene3D G3DSA:3.90.226.10 230 277 2.2E-12 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB7673 8893bb2802f415ff7aa1c7439f868636 524 Gene3D G3DSA:3.90.226.10 73 162 2.2E-12 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB1866 8d59df10a74ad446dd757435510cac88 335 SUPERFAMILY SSF52540 3 221 8.43E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1866 8d59df10a74ad446dd757435510cac88 335 Pfam PF00005 ABC transporter 22 159 3.5E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB1866 8d59df10a74ad446dd757435510cac88 335 SMART SM00382 29 206 3.3E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1866 8d59df10a74ad446dd757435510cac88 335 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB1866 8d59df10a74ad446dd757435510cac88 335 Gene3D G3DSA:3.40.50.300 2 220 2.8E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2254 350eeb85d5c4ea30e66a76e9c37249a7 541 Gene3D G3DSA:3.40.720.10 64 430 1.3E-92 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2254 350eeb85d5c4ea30e66a76e9c37249a7 541 Pfam PF16347 Domain of unknown function (DUF4976) 415 514 3.2E-9 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB2254 350eeb85d5c4ea30e66a76e9c37249a7 541 Pfam PF00884 Sulfatase 67 410 5.9E-55 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2254 350eeb85d5c4ea30e66a76e9c37249a7 541 Gene3D G3DSA:3.30.1120.10 446 517 2.5E-13 T 11-11-2016 RB2254 350eeb85d5c4ea30e66a76e9c37249a7 541 SUPERFAMILY SSF53649 65 516 3.81E-110 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB4223 da4fbe9340a051c655209c3f119da4d8 283 Pfam PF02586 SOS response associated peptidase (SRAP) 24 224 3.6E-22 T 11-11-2016 IPR003738 SOS response associated peptidase (SRAP) RB4223 da4fbe9340a051c655209c3f119da4d8 283 Gene3D G3DSA:3.90.1680.10 24 233 3.3E-26 T 11-11-2016 IPR003738 SOS response associated peptidase (SRAP) RB4223 da4fbe9340a051c655209c3f119da4d8 283 SUPERFAMILY SSF143081 25 227 1.26E-40 T 11-11-2016 IPR003738 SOS response associated peptidase (SRAP) RB5585 fa8af151e36718b956fc984c987f4b83 200 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 14 195 5.6E-68 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB5585 fa8af151e36718b956fc984c987f4b83 200 Gene3D G3DSA:1.10.10.10 135 196 6.8E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB5585 fa8af151e36718b956fc984c987f4b83 200 SUPERFAMILY SSF88946 12 115 4.32E-7 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5585 fa8af151e36718b956fc984c987f4b83 200 SUPERFAMILY SSF88659 121 197 2.43E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5585 fa8af151e36718b956fc984c987f4b83 200 Pfam PF07638 ECF sigma factor 14 196 2.2E-72 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB5585 fa8af151e36718b956fc984c987f4b83 200 Gene3D G3DSA:1.10.1740.10 16 113 2.7E-5 T 11-11-2016 RB5585 fa8af151e36718b956fc984c987f4b83 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 192 2.9E-20 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5420 a9596b85447ce5c27e652dc6c6154f1b 171 Pfam PF04542 Sigma-70 region 2 4 75 2.1E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5420 a9596b85447ce5c27e652dc6c6154f1b 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 159 7.0E-16 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5420 a9596b85447ce5c27e652dc6c6154f1b 171 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 1 160 1.0E-55 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB5420 a9596b85447ce5c27e652dc6c6154f1b 171 Gene3D G3DSA:1.10.1740.10 2 88 5.6E-14 T 11-11-2016 RB5420 a9596b85447ce5c27e652dc6c6154f1b 171 SUPERFAMILY SSF88946 3 86 2.79E-13 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB3417 4a263d8f2b10a65fe932093cff824ee1 353 SUPERFAMILY SSF81853 45 352 5.36E-94 T 11-11-2016 RB3417 4a263d8f2b10a65fe932093cff824ee1 353 TIGRFAM TIGR02474 pec_lyase: pectate lyase 69 344 4.1E-92 T 11-11-2016 IPR012669 Pectic acid lyase RB3417 4a263d8f2b10a65fe932093cff824ee1 353 Pfam PF09492 Pectic acid lyase 69 344 5.2E-117 T 11-11-2016 IPR012669 Pectic acid lyase RB3417 4a263d8f2b10a65fe932093cff824ee1 353 Gene3D G3DSA:1.50.10.20 43 353 6.2E-119 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11918 a5e14abda8095b5a1f58157886e16144 134 Pfam PF06155 Protein of unknown function (DUF971) 22 130 1.3E-21 T 11-11-2016 IPR010376 Domain of unknown function DUF971 Reactome: R-HSA-71262 RB8684 a6df566f3290a8ce115649664f6bf4e9 359 Gene3D G3DSA:3.40.50.720 3 137 8.2E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8684 a6df566f3290a8ce115649664f6bf4e9 359 PIRSF PIRSF026760 8 349 2.9E-120 T 11-11-2016 IPR011669 Protein of unknown function DUF1611 RB8684 a6df566f3290a8ce115649664f6bf4e9 359 Gene3D G3DSA:3.40.50.300 140 342 4.3E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8684 a6df566f3290a8ce115649664f6bf4e9 359 Pfam PF07755 Protein of unknown function (DUF1611) 43 339 2.4E-107 T 11-11-2016 IPR011669 Protein of unknown function DUF1611 RB8684 a6df566f3290a8ce115649664f6bf4e9 359 SUPERFAMILY SSF52540 3 343 1.06E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB927 038a3b7dcf15faf42792bbf62618898b 227 Pfam PF00589 Phage integrase family 75 226 1.5E-27 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB927 038a3b7dcf15faf42792bbf62618898b 227 Gene3D G3DSA:1.10.443.10 72 227 3.5E-34 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB927 038a3b7dcf15faf42792bbf62618898b 227 SUPERFAMILY SSF56349 8 226 1.29E-37 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB9012 84ede232610c875cf7affda0a173d17d 1083 SUPERFAMILY SSF52833 936 1078 1.06E-34 T 11-11-2016 IPR012336 Thioredoxin-like fold RB9012 84ede232610c875cf7affda0a173d17d 1083 Pfam PF00578 AhpC/TSA family 939 1054 2.2E-21 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB9012 84ede232610c875cf7affda0a173d17d 1083 Gene3D G3DSA:3.40.30.10 936 1081 3.0E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold RB1065 bc9a8d13f4f2eef256cf2f24c78faae6 105 PRINTS PR00340 P-II protein signature 86 105 2.3E-16 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB1065 bc9a8d13f4f2eef256cf2f24c78faae6 105 PRINTS PR00340 P-II protein signature 2 17 2.3E-16 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB1065 bc9a8d13f4f2eef256cf2f24c78faae6 105 PRINTS PR00340 P-II protein signature 23 41 2.3E-16 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB1065 bc9a8d13f4f2eef256cf2f24c78faae6 105 Gene3D G3DSA:3.30.70.120 1 105 5.0E-33 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RB1065 bc9a8d13f4f2eef256cf2f24c78faae6 105 SMART SM00938 4 105 5.1E-35 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB1065 bc9a8d13f4f2eef256cf2f24c78faae6 105 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.3E-29 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB1065 bc9a8d13f4f2eef256cf2f24c78faae6 105 SUPERFAMILY SSF54913 1 105 9.53E-29 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RB8516 3e077435f319a2094edf5e94b3da8dc2 691 Pfam PF02321 Outer membrane efflux protein 396 588 6.6E-13 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB8516 3e077435f319a2094edf5e94b3da8dc2 691 Pfam PF02321 Outer membrane efflux protein 201 354 2.1E-5 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB8516 3e077435f319a2094edf5e94b3da8dc2 691 Gene3D G3DSA:1.20.1600.10 255 432 3.0E-32 T 11-11-2016 RB8516 3e077435f319a2094edf5e94b3da8dc2 691 Gene3D G3DSA:1.20.1600.10 467 587 3.0E-32 T 11-11-2016 RB8516 3e077435f319a2094edf5e94b3da8dc2 691 Gene3D G3DSA:1.20.1600.10 96 124 3.0E-32 T 11-11-2016 RB8516 3e077435f319a2094edf5e94b3da8dc2 691 SUPERFAMILY SSF56954 262 597 4.58E-42 T 11-11-2016 RB8516 3e077435f319a2094edf5e94b3da8dc2 691 SUPERFAMILY SSF56954 14 45 4.58E-42 T 11-11-2016 RB8516 3e077435f319a2094edf5e94b3da8dc2 691 SUPERFAMILY SSF56954 96 186 4.58E-42 T 11-11-2016 RB4508 5abf056ef37c8821a18f663cf4f93d8c 218 SUPERFAMILY SSF52172 66 187 1.71E-27 T 11-11-2016 IPR011006 CheY-like superfamily RB4508 5abf056ef37c8821a18f663cf4f93d8c 218 Gene3D G3DSA:3.40.50.2300 62 189 5.9E-27 T 11-11-2016 RB4508 5abf056ef37c8821a18f663cf4f93d8c 218 Pfam PF00072 Response regulator receiver domain 70 182 2.0E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4508 5abf056ef37c8821a18f663cf4f93d8c 218 SMART SM00448 67 182 2.9E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7033 8ad7cb68e1dfdd7dcea624bf502242b5 793 Pfam PF07626 Protein of unknown function (DUF1587) 156 219 7.3E-27 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB7033 8ad7cb68e1dfdd7dcea624bf502242b5 793 Pfam PF16841 Ca-dependent carbohydrate-binding module xylan-binding 270 353 8.6E-18 T 11-11-2016 IPR031768 Carbohydrate binding module, xylan-binding domain MetaCyc: PWY-6784 RB7033 8ad7cb68e1dfdd7dcea624bf502242b5 793 Pfam PF07627 Protein of unknown function (DUF1588) 602 698 1.7E-36 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB7033 8ad7cb68e1dfdd7dcea624bf502242b5 793 Pfam PF07631 Protein of unknown function (DUF1592) 458 584 2.6E-44 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB7033 8ad7cb68e1dfdd7dcea624bf502242b5 793 Pfam PF07637 Protein of unknown function (DUF1595) 383 443 9.7E-21 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB7033 8ad7cb68e1dfdd7dcea624bf502242b5 793 Pfam PF07624 Protein of unknown function (DUF1585) 711 785 6.8E-28 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB7033 8ad7cb68e1dfdd7dcea624bf502242b5 793 Pfam PF07635 Planctomycete cytochrome C 72 119 1.2E-7 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB9905 6ff3c8604d54e31d232abe35566b6b66 291 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 22 97 1.9E-27 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family RB9905 6ff3c8604d54e31d232abe35566b6b66 291 Pfam PF01609 Transposase DDE domain 118 268 5.7E-20 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB7940 23e743ec1d2a3101c609f99c1dfe8322 746 Gene3D G3DSA:1.20.1050.40 61 197 3.1E-16 T 11-11-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RB7940 23e743ec1d2a3101c609f99c1dfe8322 746 Gene3D G3DSA:3.40.390.10 419 570 1.2E-47 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB7940 23e743ec1d2a3101c609f99c1dfe8322 746 SUPERFAMILY SSF55486 62 743 2.98E-174 T 11-11-2016 RB7940 23e743ec1d2a3101c609f99c1dfe8322 746 Gene3D G3DSA:1.10.1370.10 571 744 9.8E-112 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RB7940 23e743ec1d2a3101c609f99c1dfe8322 746 Gene3D G3DSA:1.10.1370.10 199 409 9.8E-112 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RB7940 23e743ec1d2a3101c609f99c1dfe8322 746 Pfam PF01432 Peptidase family M3 281 743 3.6E-117 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RB5848 05f33a37a7d1f99f1a62458c73099eae 140 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 85 109 - T 11-11-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RB5848 05f33a37a7d1f99f1a62458c73099eae 140 SUPERFAMILY SSF109635 5 80 5.23E-7 T 11-11-2016 RB5848 05f33a37a7d1f99f1a62458c73099eae 140 PRINTS PR00618 DksA/TraR zinc finger signature 97 109 9.7E-5 T 11-11-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RB5848 05f33a37a7d1f99f1a62458c73099eae 140 PRINTS PR00618 DksA/TraR zinc finger signature 85 96 9.7E-5 T 11-11-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria RB5848 05f33a37a7d1f99f1a62458c73099eae 140 SUPERFAMILY SSF57716 82 116 1.1E-8 T 11-11-2016 RB5848 05f33a37a7d1f99f1a62458c73099eae 140 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 80 115 5.1E-12 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RB11937 ecec619d96b4791133a1e870fff4dd48 477 Gene3D G3DSA:1.10.760.10 298 347 2.9E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11937 ecec619d96b4791133a1e870fff4dd48 477 Gene3D G3DSA:1.10.760.10 389 451 2.9E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11937 ecec619d96b4791133a1e870fff4dd48 477 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 117 201 4.4E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11937 ecec619d96b4791133a1e870fff4dd48 477 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 321 447 8.5E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11937 ecec619d96b4791133a1e870fff4dd48 477 SUPERFAMILY SSF46626 298 349 2.74E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11937 ecec619d96b4791133a1e870fff4dd48 477 SUPERFAMILY SSF46626 402 457 2.74E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11937 ecec619d96b4791133a1e870fff4dd48 477 Gene3D G3DSA:1.10.760.10 107 205 7.5E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11937 ecec619d96b4791133a1e870fff4dd48 477 SUPERFAMILY SSF46626 107 204 3.84E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82866 861 1058 1.24E-45 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 Gene3D G3DSA:3.30.2090.10 204 298 6.2E-25 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82714 752 837 1.02E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82714 205 295 9.29E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82693 60 152 2.88E-27 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 Pfam PF00873 AcrB/AcrD/AcrF family 25 1056 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 Gene3D G3DSA:1.20.1640.10 314 528 2.0E-62 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82693 595 701 1.73E-23 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82866 319 520 3.14E-51 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 386 407 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 414 438 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 492 515 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 651 665 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 359 382 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 582 599 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 30 54 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 PRINTS PR00702 Acriflavin resistance protein family signature 58 76 1.8E-88 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 Gene3D G3DSA:3.30.2090.10 752 837 4.1E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82693 838 887 1.92E-28 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82693 702 751 1.92E-28 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 Gene3D G3DSA:3.30.70.1430 60 161 4.7E-33 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82693 297 353 1.67E-24 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 SUPERFAMILY SSF82693 157 204 1.67E-24 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 Gene3D G3DSA:1.10.3850.10 845 1058 1.4E-57 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 Gene3D G3DSA:3.30.70.1430 597 701 2.5E-25 T 11-11-2016 RB11072 28bd434c24dd1a0085029c22bebf0dcc 1072 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 24 1067 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RB8796 4f9d259be2f4950328a3cb9e37704047 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 1.0E-14 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RB8796 4f9d259be2f4950328a3cb9e37704047 231 SMART SM00895 83 219 9.7E-19 T 11-11-2016 IPR011711 GntR, C-terminal RB8796 4f9d259be2f4950328a3cb9e37704047 231 SMART SM00345 15 73 1.1E-10 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RB8796 4f9d259be2f4950328a3cb9e37704047 231 Gene3D G3DSA:1.10.10.10 7 74 3.9E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8796 4f9d259be2f4950328a3cb9e37704047 231 SUPERFAMILY SSF46785 10 77 5.03E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8796 4f9d259be2f4950328a3cb9e37704047 231 Pfam PF07729 FCD domain 83 217 3.2E-22 T 11-11-2016 IPR011711 GntR, C-terminal RB8796 4f9d259be2f4950328a3cb9e37704047 231 Gene3D G3DSA:1.20.120.530 78 229 6.4E-25 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RB8796 4f9d259be2f4950328a3cb9e37704047 231 SUPERFAMILY SSF48008 80 223 1.44E-23 T 11-11-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RB328 554274d90d957a84b9febb9019e17868 210 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 210 27.018 T 11-11-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB328 554274d90d957a84b9febb9019e17868 210 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 33 205 1.1E-41 T 11-11-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB328 554274d90d957a84b9febb9019e17868 210 Pfam PF00156 Phosphoribosyl transferase domain 83 185 9.2E-8 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RB328 554274d90d957a84b9febb9019e17868 210 SUPERFAMILY SSF53271 33 205 5.39E-36 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB328 554274d90d957a84b9febb9019e17868 210 Gene3D G3DSA:3.40.50.2020 32 206 1.1E-47 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB3405 820b6b57a179e183ab299574fe22436a 767 Pfam PF00703 Glycosyl hydrolases family 2 370 460 1.7E-11 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RB3405 820b6b57a179e183ab299574fe22436a 767 Gene3D G3DSA:2.60.120.260 31 160 3.0E-10 T 11-11-2016 IPR008979 Galactose-binding domain-like RB3405 820b6b57a179e183ab299574fe22436a 767 Gene3D G3DSA:3.20.20.80 471 754 9.0E-52 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB3405 820b6b57a179e183ab299574fe22436a 767 Gene3D G3DSA:2.60.120.260 200 357 3.8E-52 T 11-11-2016 IPR008979 Galactose-binding domain-like RB3405 820b6b57a179e183ab299574fe22436a 767 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 503 632 3.0E-10 T 11-11-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RB3405 820b6b57a179e183ab299574fe22436a 767 SUPERFAMILY SSF49303 370 460 8.35E-15 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 RB3405 820b6b57a179e183ab299574fe22436a 767 SUPERFAMILY SSF51445 458 752 1.49E-56 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB3405 820b6b57a179e183ab299574fe22436a 767 SUPERFAMILY SSF49785 21 162 1.84E-12 T 11-11-2016 IPR008979 Galactose-binding domain-like RB3405 820b6b57a179e183ab299574fe22436a 767 Gene3D G3DSA:2.60.40.320 358 460 6.4E-22 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 RB3405 820b6b57a179e183ab299574fe22436a 767 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 217 362 1.6E-12 T 11-11-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RB3405 820b6b57a179e183ab299574fe22436a 767 SUPERFAMILY SSF49785 201 365 7.65E-44 T 11-11-2016 IPR008979 Galactose-binding domain-like RB9942 6f52942a5164a1364f543afa381d8f42 530 Gene3D G3DSA:3.40.50.150 64 204 3.1E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9942 6f52942a5164a1364f543afa381d8f42 530 Pfam PF13847 Methyltransferase domain 68 180 7.0E-13 T 11-11-2016 IPR025714 Methyltransferase domain RB9942 6f52942a5164a1364f543afa381d8f42 530 SUPERFAMILY SSF53335 54 205 1.79E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9942 6f52942a5164a1364f543afa381d8f42 530 Pfam PF10119 Predicted methyltransferase regulatory domain 244 324 1.6E-21 T 11-11-2016 IPR018773 Methyltransferase regulatory domain, predicted RB6563 d1f6a49a99ce2508a3d595ddadb3e2b1 286 Gene3D G3DSA:3.20.20.70 26 282 1.6E-104 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6563 d1f6a49a99ce2508a3d595ddadb3e2b1 286 Pfam PF00793 DAHP synthetase I family 19 267 4.5E-60 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RB6563 d1f6a49a99ce2508a3d595ddadb3e2b1 286 SUPERFAMILY SSF51569 15 283 3.02E-96 T 11-11-2016 RB6563 d1f6a49a99ce2508a3d595ddadb3e2b1 286 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 22 284 51.534 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RB6563 d1f6a49a99ce2508a3d595ddadb3e2b1 286 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 27 281 2.2E-109 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RB10587 aa599fa7f96d9ab8e68e0e8edd65da13 225 SUPERFAMILY SSF56300 36 177 1.46E-15 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10587 aa599fa7f96d9ab8e68e0e8edd65da13 225 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 14 223 3.8E-62 T 11-11-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated RB10587 aa599fa7f96d9ab8e68e0e8edd65da13 225 Pfam PF00149 Calcineurin-like phosphoesterase 36 125 2.5E-4 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB10587 aa599fa7f96d9ab8e68e0e8edd65da13 225 Gene3D G3DSA:3.60.21.10 36 125 1.2E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 Pfam PF13643 Domain of unknown function (DUF4145) 30 120 1.3E-7 T 11-11-2016 IPR025285 Domain of unknown function DUF4145 RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 SMART SM00490 735 820 6.7E-9 T 11-11-2016 IPR001650 Helicase, C-terminal RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 SMART SM00487 429 643 7.9E-18 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 Gene3D G3DSA:3.40.50.300 702 822 1.1E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 SUPERFAMILY SSF52540 447 616 4.93E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 SUPERFAMILY SSF52540 683 822 4.93E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 Gene3D G3DSA:3.40.50.300 432 514 2.2E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 Gene3D G3DSA:3.40.50.300 546 624 2.2E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 306 372 2.5E-8 T 11-11-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 Pfam PF08463 EcoEI R protein C-terminal 973 1129 8.8E-39 T 11-11-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 Pfam PF04851 Type III restriction enzyme, res subunit 432 614 1.1E-36 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RB10770 dc3ecb70282f468a856d3b54a494f74a 1138 Pfam PF00271 Helicase conserved C-terminal domain 711 818 6.1E-9 T 11-11-2016 IPR001650 Helicase, C-terminal RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 SUPERFAMILY SSF52540 408 634 1.19E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 SMART SM00487 286 475 1.7E-25 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 Pfam PF00270 DEAD/DEAH box helicase 311 449 1.9E-14 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 Gene3D G3DSA:1.10.150.20 17 46 8.5E-4 T 11-11-2016 RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 Gene3D G3DSA:3.40.50.300 277 470 9.3E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 SUPERFAMILY SSF52540 221 468 2.42E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 SUPERFAMILY SSF50249 12 188 1.77E-38 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 Gene3D G3DSA:3.40.50.300 471 670 9.3E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 SMART SM00490 352 433 0.66 T 11-11-2016 IPR001650 Helicase, C-terminal RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 SMART SM00490 537 622 1.6E-19 T 11-11-2016 IPR001650 Helicase, C-terminal RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 Gene3D G3DSA:2.40.50.140 60 150 3.4E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 Pfam PF17191 RecG wedge domain 19 181 1.0E-15 T 11-11-2016 IPR033454 RecG, wedge domain RB1046 c3e923ca8a6fc3ca67fab7161e499896 734 Pfam PF00271 Helicase conserved C-terminal domain 549 621 1.1E-16 T 11-11-2016 IPR001650 Helicase, C-terminal RB6075 e45156f460041f62abaa3392a7953b90 520 Gene3D G3DSA:3.50.50.60 286 397 3.1E-6 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB6075 e45156f460041f62abaa3392a7953b90 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 291 1.7E-9 T 11-11-2016 RB6075 e45156f460041f62abaa3392a7953b90 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 373 389 1.7E-9 T 11-11-2016 RB6075 e45156f460041f62abaa3392a7953b90 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 81 100 1.7E-9 T 11-11-2016 RB6075 e45156f460041f62abaa3392a7953b90 520 Gene3D G3DSA:3.50.50.60 77 285 1.2E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB6075 e45156f460041f62abaa3392a7953b90 520 SUPERFAMILY SSF51905 81 466 1.04E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB6075 e45156f460041f62abaa3392a7953b90 520 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 83 398 7.1E-16 T 11-11-2016 RB6075 e45156f460041f62abaa3392a7953b90 520 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 374 388 3.4E-7 T 11-11-2016 RB6075 e45156f460041f62abaa3392a7953b90 520 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 80 102 3.4E-7 T 11-11-2016 RB6075 e45156f460041f62abaa3392a7953b90 520 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 298 3.4E-7 T 11-11-2016 RB2008 931f574837c3b07f11a1a58d42048a8f 452 SUPERFAMILY SSF55785 59 166 9.95E-19 T 11-11-2016 IPR000014 PAS domain RB2008 931f574837c3b07f11a1a58d42048a8f 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 194 263 2.3E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2008 931f574837c3b07f11a1a58d42048a8f 452 SMART SM00086 124 166 2.1E-7 T 11-11-2016 IPR001610 PAC motif RB2008 931f574837c3b07f11a1a58d42048a8f 452 Pfam PF08447 PAS fold 73 160 1.5E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB2008 931f574837c3b07f11a1a58d42048a8f 452 SMART SM00388 193 264 6.2E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2008 931f574837c3b07f11a1a58d42048a8f 452 SUPERFAMILY SSF55874 254 413 3.01E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2008 931f574837c3b07f11a1a58d42048a8f 452 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 51 173 8.6E-12 T 11-11-2016 IPR000014 PAS domain RB2008 931f574837c3b07f11a1a58d42048a8f 452 SMART SM00387 303 415 6.5E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2008 931f574837c3b07f11a1a58d42048a8f 452 Gene3D G3DSA:3.30.565.10 267 419 4.2E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2008 931f574837c3b07f11a1a58d42048a8f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 370 2.0E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2008 931f574837c3b07f11a1a58d42048a8f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 2.0E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2008 931f574837c3b07f11a1a58d42048a8f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 393 2.0E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2008 931f574837c3b07f11a1a58d42048a8f 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 412 6.0E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2008 931f574837c3b07f11a1a58d42048a8f 452 SUPERFAMILY SSF47384 181 262 2.35E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2008 931f574837c3b07f11a1a58d42048a8f 452 Gene3D G3DSA:3.30.450.20 40 178 1.2E-26 T 11-11-2016 RB2008 931f574837c3b07f11a1a58d42048a8f 452 Gene3D G3DSA:1.10.287.130 184 260 3.7E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB10038 2d6c4d6d34c74216dc550b3f3de9b4a0 476 SUPERFAMILY SSF52777 16 163 1.93E-17 T 11-11-2016 RB10038 2d6c4d6d34c74216dc550b3f3de9b4a0 476 SUPERFAMILY SSF52777 243 413 2.22E-5 T 11-11-2016 RB10038 2d6c4d6d34c74216dc550b3f3de9b4a0 476 Pfam PF00668 Condensation domain 41 160 1.0E-5 T 11-11-2016 IPR001242 Condensation domain RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 Pfam PF02080 TrkA-C domain 153 221 1.2E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 Pfam PF02080 TrkA-C domain 378 445 6.5E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 SUPERFAMILY SSF116726 370 445 8.37E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 SUPERFAMILY SSF51735 1 149 8.28E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 Gene3D G3DSA:3.40.50.720 1 150 1.4E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 Gene3D G3DSA:3.40.50.720 229 370 8.8E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 SUPERFAMILY SSF51735 229 374 2.04E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 Gene3D G3DSA:3.30.70.1450 379 432 3.1E-4 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 Gene3D G3DSA:3.30.70.1450 151 221 9.4E-6 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.0E-7 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.0E-7 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.0E-7 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.0E-7 T 11-11-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 SUPERFAMILY SSF116726 145 221 1.57E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 Pfam PF02254 TrkA-N domain 232 347 1.1E-18 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RB8035 fd0a164c8b21b67171cd04a24f90cdb9 448 Pfam PF02254 TrkA-N domain 6 103 1.3E-18 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RB11174 daa2ace572929c38ce759bb313de1776 469 SUPERFAMILY SSF52821 238 369 4.45E-16 T 11-11-2016 IPR001763 Rhodanese-like domain RB11174 daa2ace572929c38ce759bb313de1776 469 SMART SM00450 368 466 9.9E-21 T 11-11-2016 IPR001763 Rhodanese-like domain RB11174 daa2ace572929c38ce759bb313de1776 469 SMART SM00450 265 363 0.024 T 11-11-2016 IPR001763 Rhodanese-like domain RB11174 daa2ace572929c38ce759bb313de1776 469 SUPERFAMILY SSF52821 366 467 3.93E-24 T 11-11-2016 IPR001763 Rhodanese-like domain RB11174 daa2ace572929c38ce759bb313de1776 469 SMART SM00849 17 191 6.0E-25 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11174 daa2ace572929c38ce759bb313de1776 469 SUPERFAMILY SSF56281 15 249 5.04E-46 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11174 daa2ace572929c38ce759bb313de1776 469 Pfam PF00581 Rhodanese-like domain 373 463 6.9E-12 T 11-11-2016 IPR001763 Rhodanese-like domain RB11174 daa2ace572929c38ce759bb313de1776 469 Pfam PF00581 Rhodanese-like domain 267 359 3.7E-6 T 11-11-2016 IPR001763 Rhodanese-like domain RB11174 daa2ace572929c38ce759bb313de1776 469 Gene3D G3DSA:3.40.250.10 368 469 3.3E-25 T 11-11-2016 IPR001763 Rhodanese-like domain RB11174 daa2ace572929c38ce759bb313de1776 469 Gene3D G3DSA:3.40.250.10 253 367 1.6E-11 T 11-11-2016 IPR001763 Rhodanese-like domain RB11174 daa2ace572929c38ce759bb313de1776 469 Pfam PF00753 Metallo-beta-lactamase superfamily 18 157 2.4E-6 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11174 daa2ace572929c38ce759bb313de1776 469 Gene3D G3DSA:3.60.15.10 13 246 4.1E-52 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB5513 6417411674d266e884be60cdcab2e321 634 Pfam PF03934 Type II secretion system (T2SS), protein K 106 304 2.7E-20 T 11-11-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RB5513 6417411674d266e884be60cdcab2e321 634 SUPERFAMILY SSF158544 231 304 4.45E-17 T 11-11-2016 RB5513 6417411674d266e884be60cdcab2e321 634 SUPERFAMILY SSF158544 185 200 4.45E-17 T 11-11-2016 RB5513 6417411674d266e884be60cdcab2e321 634 Gene3D G3DSA:1.10.40.60 184 305 6.1E-22 T 11-11-2016 RB6993 7ac9b2f6a946edb625c9d6a4a0dfd517 305 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 110 279 2.2E-39 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 RB6993 7ac9b2f6a946edb625c9d6a4a0dfd517 305 Gene3D G3DSA:3.40.50.620 77 273 2.4E-54 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB6993 7ac9b2f6a946edb625c9d6a4a0dfd517 305 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 94 302 1.4E-68 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 RB6993 7ac9b2f6a946edb625c9d6a4a0dfd517 305 SUPERFAMILY SSF52402 82 267 5.71E-47 T 11-11-2016 RB1639 b1e0dbf74020c12f78c3f99ee38cbfa4 599 Pfam PF01593 Flavin containing amine oxidoreductase 124 589 6.6E-22 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB1639 b1e0dbf74020c12f78c3f99ee38cbfa4 599 SUPERFAMILY SSF51905 555 591 1.83E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1639 b1e0dbf74020c12f78c3f99ee38cbfa4 599 SUPERFAMILY SSF51905 113 450 1.83E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1639 b1e0dbf74020c12f78c3f99ee38cbfa4 599 Gene3D G3DSA:3.50.50.60 114 230 1.3E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1639 b1e0dbf74020c12f78c3f99ee38cbfa4 599 Gene3D G3DSA:3.50.50.60 336 448 1.3E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3639 5ec7751616377aa445c5b00bc85e47dc 278 Gene3D G3DSA:3.40.50.1110 69 271 1.2E-62 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3639 5ec7751616377aa445c5b00bc85e47dc 278 SUPERFAMILY SSF52266 69 272 9.44E-51 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3639 5ec7751616377aa445c5b00bc85e47dc 278 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 73 245 1.5E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7856 62acb661a43cb516146d5bbda4d5133f 181 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 156 164 - T 11-11-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7856 62acb661a43cb516146d5bbda4d5133f 181 Pfam PF00347 Ribosomal protein L6 11 84 2.2E-14 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7856 62acb661a43cb516146d5bbda4d5133f 181 Pfam PF00347 Ribosomal protein L6 92 166 2.3E-15 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7856 62acb661a43cb516146d5bbda4d5133f 181 PRINTS PR00059 Ribosomal protein L6 signature 73 98 8.4E-28 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RB7856 62acb661a43cb516146d5bbda4d5133f 181 PRINTS PR00059 Ribosomal protein L6 signature 143 164 8.4E-28 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RB7856 62acb661a43cb516146d5bbda4d5133f 181 PRINTS PR00059 Ribosomal protein L6 signature 101 117 8.4E-28 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RB7856 62acb661a43cb516146d5bbda4d5133f 181 Gene3D G3DSA:3.90.930.12 2 84 1.2E-26 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7856 62acb661a43cb516146d5bbda4d5133f 181 PIRSF PIRSF002162 1 179 1.1E-46 T 11-11-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7856 62acb661a43cb516146d5bbda4d5133f 181 SUPERFAMILY SSF56053 1 84 1.6E-21 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7856 62acb661a43cb516146d5bbda4d5133f 181 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 178 34.47 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RB7856 62acb661a43cb516146d5bbda4d5133f 181 SUPERFAMILY SSF56053 85 178 6.41E-32 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7856 62acb661a43cb516146d5bbda4d5133f 181 Gene3D G3DSA:3.90.930.12 85 179 2.9E-36 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7856 62acb661a43cb516146d5bbda4d5133f 181 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 178 3.5E-69 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RB12040 ea6fae768e61efc8f504a6c5503f058c 410 Pfam PF01565 FAD binding domain 72 162 1.6E-13 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RB12040 ea6fae768e61efc8f504a6c5503f058c 410 SUPERFAMILY SSF56176 72 199 5.61E-26 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RB12040 ea6fae768e61efc8f504a6c5503f058c 410 Gene3D G3DSA:3.30.465.10 79 199 2.7E-18 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RB10631 2d49357187cf459d7b79ee681768f097 387 SUPERFAMILY SSF55961 148 376 6.72E-31 T 11-11-2016 RB10631 2d49357187cf459d7b79ee681768f097 387 Gene3D G3DSA:3.90.380.10 142 348 6.2E-18 T 11-11-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 Gene3D G3DSA:2.102.10.10 34 141 4.5E-26 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 Pfam PF00355 Rieske [2Fe-2S] domain 34 118 4.7E-14 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 168 361 2.6E-32 T 11-11-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 SUPERFAMILY SSF50022 14 146 9.04E-35 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 168 190 5.2E-13 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 131 157 5.2E-13 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 90 110 5.2E-13 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 69 89 5.2E-13 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RB10631 2d49357187cf459d7b79ee681768f097 387 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 19 44 5.2E-13 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RB12005 53865670d0293aa5193c94bebe1e6b57 127 Pfam PF14255 Cysteine-rich CPXCG 70 120 7.7E-17 T 11-11-2016 IPR025990 Cysteine-rich CPXCG protein RB6469 5f2ee8639b7916887a4d4fcf6fce6aa3 252 SMART SM00382 30 213 1.1E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6469 5f2ee8639b7916887a4d4fcf6fce6aa3 252 SUPERFAMILY SSF52540 10 227 1.41E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6469 5f2ee8639b7916887a4d4fcf6fce6aa3 252 Pfam PF00005 ABC transporter 22 164 2.8E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB6469 5f2ee8639b7916887a4d4fcf6fce6aa3 252 Gene3D G3DSA:3.40.50.300 2 232 4.8E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12264 29e97123c3a824a4ac3961f7717cd997 111 SUPERFAMILY SSF51182 10 102 1.14E-15 T 11-11-2016 IPR011051 RmlC-like cupin domain RB12264 29e97123c3a824a4ac3961f7717cd997 111 Gene3D G3DSA:2.60.120.10 10 106 5.0E-26 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB6381 845c59149a4a187e0a86c2ad3272b21b 450 PIRSF PIRSF028431 3 450 1.2E-173 T 11-11-2016 IPR016883 Uncharacterised conserved protein UCP028431 RB6381 845c59149a4a187e0a86c2ad3272b21b 450 Pfam PF10091 Putative glucoamylase 214 434 3.5E-70 T 11-11-2016 IPR019282 Domain of unknown function DUF2329 RB10221 8eeaf0af4fa5e06e41ed764403296a28 402 Gene3D G3DSA:3.40.50.10140 249 357 1.8E-4 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB10221 8eeaf0af4fa5e06e41ed764403296a28 402 SUPERFAMILY SSF52200 249 371 6.93E-12 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB10221 8eeaf0af4fa5e06e41ed764403296a28 402 Pfam PF13676 TIR domain 254 366 1.4E-14 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB4303 b300c29688425999834e77a46f5bc3c9 464 Pfam PF03050 Transposase IS66 family 157 421 8.1E-40 T 11-11-2016 IPR004291 Transposase, IS66 RB138 736ac6833b885edf4db2d18401a3c25c 214 Gene3D G3DSA:1.10.1740.10 4 106 6.0E-8 T 11-11-2016 RB138 736ac6833b885edf4db2d18401a3c25c 214 SUPERFAMILY SSF88946 1 106 6.28E-9 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB138 736ac6833b885edf4db2d18401a3c25c 214 Gene3D G3DSA:1.10.10.10 148 202 2.8E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB138 736ac6833b885edf4db2d18401a3c25c 214 Pfam PF07638 ECF sigma factor 7 209 6.8E-71 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB138 736ac6833b885edf4db2d18401a3c25c 214 SUPERFAMILY SSF88659 146 202 9.16E-7 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5146 7db35b14cee00b8a61d3b616bf4c5019 522 SUPERFAMILY SSF53649 40 154 1.15E-109 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5146 7db35b14cee00b8a61d3b616bf4c5019 522 SUPERFAMILY SSF53649 181 520 1.15E-109 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5146 7db35b14cee00b8a61d3b616bf4c5019 522 Gene3D G3DSA:3.40.720.10 39 422 1.3E-96 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5146 7db35b14cee00b8a61d3b616bf4c5019 522 Pfam PF00884 Sulfatase 42 407 7.4E-63 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB5146 7db35b14cee00b8a61d3b616bf4c5019 522 Gene3D G3DSA:3.30.1120.10 423 519 4.7E-12 T 11-11-2016 RB5146 7db35b14cee00b8a61d3b616bf4c5019 522 Pfam PF16385 Domain of unknown function 410 517 6.2E-12 T 11-11-2016 IPR032158 Domain of unknown function DUF4994 RB11698 012f2285378d75ce66470c6f80eb47a1 256 Gene3D G3DSA:1.25.40.10 37 83 6.7E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8591 0d715008db3d15c0d17ca27d2d397135 606 SUPERFAMILY SSF52009 152 271 2.75E-30 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB8591 0d715008db3d15c0d17ca27d2d397135 606 Gene3D G3DSA:3.20.20.60 283 592 1.2E-99 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB8591 0d715008db3d15c0d17ca27d2d397135 606 PIRSF PIRSF000732 24 599 7.3E-200 T 11-11-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RB8591 0d715008db3d15c0d17ca27d2d397135 606 SUPERFAMILY SSF51621 280 576 1.19E-97 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB8591 0d715008db3d15c0d17ca27d2d397135 606 SUPERFAMILY SSF47831 51 168 2.35E-25 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RB8591 0d715008db3d15c0d17ca27d2d397135 606 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 281 567 3.2E-100 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RB8591 0d715008db3d15c0d17ca27d2d397135 606 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 29 591 1.1E-169 T 11-11-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RB8591 0d715008db3d15c0d17ca27d2d397135 606 Gene3D G3DSA:1.10.274.10 57 158 7.3E-26 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RB8591 0d715008db3d15c0d17ca27d2d397135 606 Gene3D G3DSA:3.50.30.10 159 282 1.9E-31 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB8591 0d715008db3d15c0d17ca27d2d397135 606 Pfam PF00391 PEP-utilising enzyme, mobile domain 179 252 6.2E-19 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB8591 0d715008db3d15c0d17ca27d2d397135 606 Pfam PF05524 PEP-utilising enzyme, N-terminal 30 153 6.8E-26 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RB8591 0d715008db3d15c0d17ca27d2d397135 606 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 474 492 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RB8591 0d715008db3d15c0d17ca27d2d397135 606 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 474 489 1.2E-22 T 11-11-2016 RB8591 0d715008db3d15c0d17ca27d2d397135 606 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 527 539 1.2E-22 T 11-11-2016 RB8591 0d715008db3d15c0d17ca27d2d397135 606 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 491 506 1.2E-22 T 11-11-2016 RB8591 0d715008db3d15c0d17ca27d2d397135 606 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 320 339 1.2E-22 T 11-11-2016 RB2939 1e10097ae3791e20d956498e91df0852 163 Pfam PF08592 Domain of unknown function (DUF1772) 19 152 3.3E-16 T 11-11-2016 IPR013901 Protein of unknown function DUF1772 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 239 378 1.9E-66 T 11-11-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 6 389 53.947 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 SUPERFAMILY SSF55973 239 388 3.92E-66 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 SUPERFAMILY SSF55973 117 238 1.06E-48 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 Gene3D G3DSA:3.30.300.10 139 239 3.7E-40 T 11-11-2016 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 Gene3D G3DSA:3.30.300.10 250 389 7.5E-66 T 11-11-2016 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 SUPERFAMILY SSF55973 7 113 2.75E-44 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 Pfam PF02772 S-adenosylmethionine synthetase, central domain 121 237 1.2E-45 T 11-11-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 265 273 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 PIRSF PIRSF000497 2 390 1.5E-172 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 Gene3D G3DSA:3.30.300.10 15 138 1.0E-44 T 11-11-2016 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 9 387 4.2E-171 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 122 132 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB5444 2a7c028277fd1d41c21f2377a8d86ba7 395 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 8 105 6.1E-40 T 11-11-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RB9612 6ef7ca695117bed6991a0c911f681aac 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 4 533 1.8E-126 T 11-11-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 RB9612 6ef7ca695117bed6991a0c911f681aac 547 SMART SM00382 352 527 6.3E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9612 6ef7ca695117bed6991a0c911f681aac 547 Pfam PF00005 ABC transporter 345 478 9.9E-22 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9612 6ef7ca695117bed6991a0c911f681aac 547 Gene3D G3DSA:3.40.50.300 324 530 3.4E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9612 6ef7ca695117bed6991a0c911f681aac 547 SUPERFAMILY SSF52540 323 529 5.33E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9612 6ef7ca695117bed6991a0c911f681aac 547 SUPERFAMILY SSF90123 5 302 1.57E-24 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB9612 6ef7ca695117bed6991a0c911f681aac 547 Pfam PF00664 ABC transporter transmembrane region 23 197 1.8E-7 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB9612 6ef7ca695117bed6991a0c911f681aac 547 Gene3D G3DSA:1.20.1560.10 6 302 2.8E-18 T 11-11-2016 RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 SUPERFAMILY SSF82171 508 571 8.24E-18 T 11-11-2016 RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 SUPERFAMILY SSF82171 608 756 8.24E-18 T 11-11-2016 RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 SUPERFAMILY SSF82171 269 461 8.24E-18 T 11-11-2016 RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 Gene3D G3DSA:2.130.10.10 523 588 5.3E-19 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 Gene3D G3DSA:2.130.10.10 35 126 5.3E-19 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 Gene3D G3DSA:2.130.10.10 265 419 5.3E-19 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 SUPERFAMILY SSF53474 767 1022 1.3E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 Pfam PF00326 Prolyl oligopeptidase family 844 1024 3.4E-26 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 Gene3D G3DSA:3.40.50.1820 713 1022 1.8E-59 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB101 3ef758c1c44d02b229e8c4c3b982b20d 1054 Pfam PF07676 WD40-like Beta Propeller Repeat 337 369 0.23 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB5134 ed3b96c3eff8d45ed01d5655c2c4db05 208 Pfam PF01725 Ham1 family 7 194 2.4E-48 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 RB5134 ed3b96c3eff8d45ed01d5655c2c4db05 208 SUPERFAMILY SSF52972 3 198 2.07E-62 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RB5134 ed3b96c3eff8d45ed01d5655c2c4db05 208 Gene3D G3DSA:3.90.950.10 4 199 1.0E-68 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RB5134 ed3b96c3eff8d45ed01d5655c2c4db05 208 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 5 199 47.448 T 11-11-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RB5134 ed3b96c3eff8d45ed01d5655c2c4db05 208 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 197 4.2E-51 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 RB2238 3b4209c620b559966e8ff693efe7861d 438 SUPERFAMILY SSF52343 190 322 3.8E-28 T 11-11-2016 RB2238 3b4209c620b559966e8ff693efe7861d 438 Gene3D G3DSA:3.10.20.30 319 437 1.2E-18 T 11-11-2016 IPR012675 Beta-grasp domain RB2238 3b4209c620b559966e8ff693efe7861d 438 Gene3D G3DSA:3.40.50.80 190 318 1.8E-28 T 11-11-2016 RB2238 3b4209c620b559966e8ff693efe7861d 438 Gene3D G3DSA:2.40.30.10 74 178 6.4E-33 T 11-11-2016 RB2238 3b4209c620b559966e8ff693efe7861d 438 SUPERFAMILY SSF54292 343 437 1.48E-16 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RB2238 3b4209c620b559966e8ff693efe7861d 438 Pfam PF00175 Oxidoreductase NAD-binding domain 194 303 5.4E-8 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RB2238 3b4209c620b559966e8ff693efe7861d 438 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 364 430 1.0E-7 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RB2238 3b4209c620b559966e8ff693efe7861d 438 Pfam PF00970 Oxidoreductase FAD-binding domain 80 179 2.7E-15 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RB2238 3b4209c620b559966e8ff693efe7861d 438 PRINTS PR00410 Phenol hydroxylase reductase family signature 108 120 3.4E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RB2238 3b4209c620b559966e8ff693efe7861d 438 PRINTS PR00410 Phenol hydroxylase reductase family signature 218 227 3.4E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RB2238 3b4209c620b559966e8ff693efe7861d 438 PRINTS PR00410 Phenol hydroxylase reductase family signature 289 297 3.4E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RB2238 3b4209c620b559966e8ff693efe7861d 438 PRINTS PR00410 Phenol hydroxylase reductase family signature 193 212 3.4E-7 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RB2238 3b4209c620b559966e8ff693efe7861d 438 SUPERFAMILY SSF63380 74 179 8.0E-29 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB2238 3b4209c620b559966e8ff693efe7861d 438 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 391 399 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 722 765 6.7 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 777 804 1.0 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 675 717 0.23 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 Gene3D G3DSA:3.30.1360.40 262 357 1.1E-25 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 Gene3D G3DSA:2.120.10.90 556 809 1.7E-36 T 11-11-2016 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 SUPERFAMILY SSF101904 559 806 1.01E-45 T 11-11-2016 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 SMART SM00434 34 513 1.1E-211 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 Gene3D G3DSA:3.90.199.10 364 429 9.2E-108 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 Gene3D G3DSA:3.90.199.10 54 261 9.2E-108 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 55 510 2.9E-138 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3465 cfd1c8bc0de829dad2d4eb04336eb679 825 SUPERFAMILY SSF56719 22 536 3.53E-145 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RB6557 91e017b55344cd1dbac224c2fe2adfb3 903 SUPERFAMILY SSF46626 33 141 4.2E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6557 91e017b55344cd1dbac224c2fe2adfb3 903 Pfam PF07587 Protein of unknown function (DUF1553) 456 692 6.6E-65 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB6557 91e017b55344cd1dbac224c2fe2adfb3 903 Pfam PF07635 Planctomycete cytochrome C 63 123 2.9E-16 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB6557 91e017b55344cd1dbac224c2fe2adfb3 903 Pfam PF07583 Protein of unknown function (DUF1549) 194 394 2.6E-64 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB760 dc4f04de3982dfcee7c88cf0c25b7520 474 SUPERFAMILY SSF53649 33 462 1.29E-120 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB760 dc4f04de3982dfcee7c88cf0c25b7520 474 Gene3D G3DSA:3.40.720.10 31 379 3.4E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB760 dc4f04de3982dfcee7c88cf0c25b7520 474 Gene3D G3DSA:3.30.1120.10 380 461 2.1E-17 T 11-11-2016 RB760 dc4f04de3982dfcee7c88cf0c25b7520 474 Pfam PF00884 Sulfatase 33 362 7.1E-73 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9271 931dd579a96caaa43beee7ce08df2cf4 251 SUPERFAMILY SSF103088 106 227 1.24E-16 T 11-11-2016 IPR006665 OmpA-like domain RB9271 931dd579a96caaa43beee7ce08df2cf4 251 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 7 54 7.2E-15 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain RB9271 931dd579a96caaa43beee7ce08df2cf4 251 Pfam PF00691 OmpA family 122 217 1.8E-17 T 11-11-2016 IPR006665 OmpA-like domain RB9271 931dd579a96caaa43beee7ce08df2cf4 251 Gene3D G3DSA:3.30.1330.60 106 227 2.3E-18 T 11-11-2016 IPR006665 OmpA-like domain RB5703 dfc993c3ae70a5b077b0a9ccb2b17dea 86 Pfam PF02597 ThiS family 9 86 3.1E-14 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 RB5703 dfc993c3ae70a5b077b0a9ccb2b17dea 86 Gene3D G3DSA:3.10.20.30 6 86 8.6E-18 T 11-11-2016 IPR012675 Beta-grasp domain RB5703 dfc993c3ae70a5b077b0a9ccb2b17dea 86 SUPERFAMILY SSF54285 7 86 2.43E-14 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RB2837 a64b2a91555e4f5676c134baa775c4f3 614 Pfam PF13360 PQQ-like domain 359 525 5.5E-14 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB2837 a64b2a91555e4f5676c134baa775c4f3 614 Pfam PF13360 PQQ-like domain 248 348 6.3E-11 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB2837 a64b2a91555e4f5676c134baa775c4f3 614 SUPERFAMILY SSF50998 217 564 1.83E-47 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB2837 a64b2a91555e4f5676c134baa775c4f3 614 Gene3D G3DSA:2.140.10.10 213 592 1.4E-49 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB12532 979594b0a8e8c3711d42adf3c49711cf 405 SUPERFAMILY SSF56300 133 403 2.41E-24 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB12532 979594b0a8e8c3711d42adf3c49711cf 405 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 36 128 1.2E-14 T 11-11-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 RB12532 979594b0a8e8c3711d42adf3c49711cf 405 Gene3D G3DSA:3.60.21.10 133 401 3.9E-32 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB12532 979594b0a8e8c3711d42adf3c49711cf 405 SUPERFAMILY SSF49363 15 130 6.02E-20 T 11-11-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 RB12532 979594b0a8e8c3711d42adf3c49711cf 405 Pfam PF00149 Calcineurin-like phosphoesterase 173 318 1.2E-6 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB12532 979594b0a8e8c3711d42adf3c49711cf 405 Gene3D G3DSA:2.60.40.380 35 131 8.0E-14 T 11-11-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 RB5832 ce2e58c0bf544da2466cbfc21a54046a 519 Gene3D G3DSA:2.115.10.20 13 275 2.0E-15 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB5832 ce2e58c0bf544da2466cbfc21a54046a 519 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 17 120 1.0E-4 T 11-11-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal RB5832 ce2e58c0bf544da2466cbfc21a54046a 519 SUPERFAMILY SSF75005 11 127 8.71E-35 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB5832 ce2e58c0bf544da2466cbfc21a54046a 519 SUPERFAMILY SSF75005 166 294 8.71E-35 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB13156 b6a4a1a40b15f95b8b2e392d62b16878 393 Gene3D G3DSA:3.40.50.1820 112 387 6.6E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB13156 b6a4a1a40b15f95b8b2e392d62b16878 393 Pfam PF07859 alpha/beta hydrolase fold 144 365 2.4E-14 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB13156 b6a4a1a40b15f95b8b2e392d62b16878 393 ProSitePatterns PS00018 EF-hand calcium-binding domain. 85 97 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB13156 b6a4a1a40b15f95b8b2e392d62b16878 393 SUPERFAMILY SSF53474 102 391 1.07E-40 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB13156 b6a4a1a40b15f95b8b2e392d62b16878 393 SUPERFAMILY SSF47473 56 121 6.45E-5 T 11-11-2016 IPR011992 EF-hand domain pair RB4383 78931abdc6806bdc3461e79326341d23 545 Gene3D G3DSA:3.50.50.60 24 192 2.9E-12 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4383 78931abdc6806bdc3461e79326341d23 545 SUPERFAMILY SSF51905 24 303 2.63E-13 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4383 78931abdc6806bdc3461e79326341d23 545 Pfam PF13454 FAD-NAD(P)-binding 28 192 4.6E-37 T 11-11-2016 RB7854 18d910670a659552a14899d9f88919a7 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.528 T 11-11-2016 IPR023053 Ribosomal protein S14, type Z RB7854 18d910670a659552a14899d9f88919a7 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 11-11-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7854 18d910670a659552a14899d9f88919a7 61 Pfam PF00253 Ribosomal protein S14p/S29e 12 60 3.9E-25 T 11-11-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7854 18d910670a659552a14899d9f88919a7 61 SUPERFAMILY SSF57716 7 61 4.35E-21 T 11-11-2016 RB7854 18d910670a659552a14899d9f88919a7 61 Gene3D G3DSA:4.10.830.10 5 61 1.8E-27 T 11-11-2016 RB2200 0e62a9d09879b43c14a792c54f056ad3 527 SUPERFAMILY SSF50182 354 420 2.45E-17 T 11-11-2016 IPR010920 LSM domain RB2200 0e62a9d09879b43c14a792c54f056ad3 527 Pfam PF00924 Mechanosensitive ion channel 313 509 5.4E-55 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RB2200 0e62a9d09879b43c14a792c54f056ad3 527 Gene3D G3DSA:3.30.70.100 423 507 4.8E-29 T 11-11-2016 RB2200 0e62a9d09879b43c14a792c54f056ad3 527 SUPERFAMILY SSF82861 268 353 9.55E-12 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RB2200 0e62a9d09879b43c14a792c54f056ad3 527 SUPERFAMILY SSF82689 422 520 4.45E-34 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RB2200 0e62a9d09879b43c14a792c54f056ad3 527 Gene3D G3DSA:2.30.30.60 370 418 4.8E-15 T 11-11-2016 RB3739 371b1e0352a8e3f14d83e426a213c445 139 Pfam PF02577 Bifunctional nuclease 8 133 4.6E-37 T 11-11-2016 IPR003729 Bifunctional nuclease domain GO:0004518 RB3739 371b1e0352a8e3f14d83e426a213c445 139 SUPERFAMILY SSF103256 1 134 1.24E-37 T 11-11-2016 IPR003729 Bifunctional nuclease domain GO:0004518 RB2152 0ed544ad992d3ede2332dcf988a643cf 155 Gene3D G3DSA:3.90.79.10 7 142 5.4E-26 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB2152 0ed544ad992d3ede2332dcf988a643cf 155 Pfam PF00293 NUDIX domain 17 126 6.3E-18 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RB2152 0ed544ad992d3ede2332dcf988a643cf 155 SUPERFAMILY SSF55811 5 140 2.44E-27 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB2152 0ed544ad992d3ede2332dcf988a643cf 155 PRINTS PR00502 NUDIX hydrolase family signature 46 60 2.3E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RB2152 0ed544ad992d3ede2332dcf988a643cf 155 PRINTS PR00502 NUDIX hydrolase family signature 60 75 2.3E-5 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RB11010 87eaff5de2e8bd0635873e30f94b3f2f 278 Pfam PF10670 Domain of unknown function (DUF4198) 30 254 4.6E-67 T 11-11-2016 IPR019613 Protein of unknown function DUF4198 RB11010 87eaff5de2e8bd0635873e30f94b3f2f 278 Gene3D G3DSA:2.60.40.1120 201 260 7.5E-4 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB3733 a32579d4b5ffb2eb603f59dfe7990c9c 336 Gene3D G3DSA:3.40.50.720 17 184 7.9E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3733 a32579d4b5ffb2eb603f59dfe7990c9c 336 Gene3D G3DSA:3.90.25.10 185 322 1.1E-51 T 11-11-2016 RB3733 a32579d4b5ffb2eb603f59dfe7990c9c 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 20 315 2.0E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3733 a32579d4b5ffb2eb603f59dfe7990c9c 336 SUPERFAMILY SSF51735 17 323 8.62E-89 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1220 e34aac9b4f7e483076836ad0c17f84f3 361 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 185 194 - T 11-11-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 RB1220 e34aac9b4f7e483076836ad0c17f84f3 361 SUPERFAMILY SSF74650 9 356 3.33E-106 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RB1220 e34aac9b4f7e483076836ad0c17f84f3 361 Gene3D G3DSA:2.70.98.10 12 358 4.9E-125 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RB1220 e34aac9b4f7e483076836ad0c17f84f3 361 PIRSF PIRSF005096 4 359 7.2E-111 T 11-11-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 RB1220 e34aac9b4f7e483076836ad0c17f84f3 361 Pfam PF01263 Aldose 1-epimerase 23 353 2.2E-82 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 ProSitePatterns PS00856 Guanylate kinase-like signature. 51 68 - T 11-11-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 Hamap MF_00328 Guanylate kinase [gmk]. 14 201 33.279 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 Gene3D G3DSA:3.40.50.300 101 202 8.2E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 Gene3D G3DSA:3.40.50.300 11 25 8.2E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 SMART SM00072 15 201 4.1E-55 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 Pfam PF00625 Guanylate kinase 17 197 4.6E-43 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 Gene3D G3DSA:3.40.50.300 26 59 1.3E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 SUPERFAMILY SSF52540 14 202 2.14E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 Gene3D G3DSA:3.30.63.10 60 100 1.3E-21 T 11-11-2016 RB7090 8a2d864dc2ab5a3b4a0744d6403dda85 209 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 16 197 3.6E-66 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 RB3442 a0b10fce7f403b70cde5e279d96b35f3 474 Gene3D G3DSA:3.40.50.720 69 224 3.7E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3442 a0b10fce7f403b70cde5e279d96b35f3 474 Gene3D G3DSA:3.30.360.10 225 431 1.6E-30 T 11-11-2016 RB3442 a0b10fce7f403b70cde5e279d96b35f3 474 SUPERFAMILY SSF51735 67 242 2.45E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3442 a0b10fce7f403b70cde5e279d96b35f3 474 SUPERFAMILY SSF55347 220 372 1.9E-18 T 11-11-2016 RB3442 a0b10fce7f403b70cde5e279d96b35f3 474 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 72 211 6.2E-13 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB9661 e568166a602c930fa5f1b1b91d90785f 454 Pfam PF12852 Cupin 15 176 8.4E-7 T 11-11-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain RB9661 e568166a602c930fa5f1b1b91d90785f 454 SMART SM00342 213 296 2.9E-29 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB9661 e568166a602c930fa5f1b1b91d90785f 454 Gene3D G3DSA:1.10.10.60 252 300 5.9E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9661 e568166a602c930fa5f1b1b91d90785f 454 Pfam PF12833 Helix-turn-helix domain 219 298 2.7E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB9661 e568166a602c930fa5f1b1b91d90785f 454 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB9661 e568166a602c930fa5f1b1b91d90785f 454 Gene3D G3DSA:2.60.120.10 36 105 2.2E-4 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB9661 e568166a602c930fa5f1b1b91d90785f 454 SUPERFAMILY SSF46689 249 299 1.08E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9661 e568166a602c930fa5f1b1b91d90785f 454 Gene3D G3DSA:1.10.10.10 317 451 4.1E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9661 e568166a602c930fa5f1b1b91d90785f 454 Gene3D G3DSA:1.10.10.60 196 251 5.3E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9661 e568166a602c930fa5f1b1b91d90785f 454 SUPERFAMILY SSF46689 198 246 3.9E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9661 e568166a602c930fa5f1b1b91d90785f 454 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 9.5E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB9661 e568166a602c930fa5f1b1b91d90785f 454 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 9.5E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB9661 e568166a602c930fa5f1b1b91d90785f 454 SUPERFAMILY SSF46785 319 451 5.04E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8550 d2bd733d556f1b34df788e33985df4fd 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB8550 d2bd733d556f1b34df788e33985df4fd 450 SUPERFAMILY SSF56059 83 352 4.71E-67 T 11-11-2016 RB8550 d2bd733d556f1b34df788e33985df4fd 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.5E-209 T 11-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 RB8550 d2bd733d556f1b34df788e33985df4fd 450 Gene3D G3DSA:3.30.1490.20 130 202 3.0E-29 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB8550 d2bd733d556f1b34df788e33985df4fd 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.2E-46 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB8550 d2bd733d556f1b34df788e33985df4fd 450 SUPERFAMILY SSF52440 1 113 6.19E-48 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB8550 d2bd733d556f1b34df788e33985df4fd 450 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 1.3E-40 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB8550 d2bd733d556f1b34df788e33985df4fd 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB8550 d2bd733d556f1b34df788e33985df4fd 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 9.5E-77 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB8550 d2bd733d556f1b34df788e33985df4fd 450 Gene3D G3DSA:3.40.50.20 1 129 7.3E-51 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB8550 d2bd733d556f1b34df788e33985df4fd 450 Gene3D G3DSA:3.30.470.20 203 446 4.0E-101 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB8550 d2bd733d556f1b34df788e33985df4fd 450 SMART SM00878 336 442 9.0E-62 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB8550 d2bd733d556f1b34df788e33985df4fd 450 SUPERFAMILY SSF51246 331 445 2.3E-44 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB5057 968b1002d6d89e7fe74991af05d7ad20 542 Pfam PF03703 Bacterial PH domain 284 343 4.1E-12 T 11-11-2016 IPR005182 Domain of unknown function DUF304 RB5057 968b1002d6d89e7fe74991af05d7ad20 542 Pfam PF03703 Bacterial PH domain 65 144 6.3E-20 T 11-11-2016 IPR005182 Domain of unknown function DUF304 RB5057 968b1002d6d89e7fe74991af05d7ad20 542 Pfam PF03703 Bacterial PH domain 457 529 1.8E-15 T 11-11-2016 IPR005182 Domain of unknown function DUF304 RB5057 968b1002d6d89e7fe74991af05d7ad20 542 PIRSF PIRSF026631 1 542 1.0E-160 T 11-11-2016 IPR014529 Uncharacterised conserved protein UCP026631 RB1703 4c7037e1fb5638506d3709e2e9eea8a5 234 Gene3D G3DSA:3.90.950.10 26 212 9.0E-48 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RB1703 4c7037e1fb5638506d3709e2e9eea8a5 234 SUPERFAMILY SSF52972 26 210 5.82E-45 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RB1703 4c7037e1fb5638506d3709e2e9eea8a5 234 Hamap MF_00528 Septum formation protein Maf [maf]. 26 215 23.99 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 RB1703 4c7037e1fb5638506d3709e2e9eea8a5 234 Pfam PF02545 Maf-like protein 27 210 1.9E-41 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 RB1703 4c7037e1fb5638506d3709e2e9eea8a5 234 TIGRFAM TIGR00172 maf: septum formation protein Maf 25 208 2.4E-35 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 RB1703 4c7037e1fb5638506d3709e2e9eea8a5 234 PIRSF PIRSF006305 19 218 1.4E-59 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 RB9927 595524d5b9b59f20b438081dfdfd22c6 466 SMART SM00382 161 321 2.3E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9927 595524d5b9b59f20b438081dfdfd22c6 466 SMART SM01086 365 458 1.4E-30 T 11-11-2016 IPR019489 Clp ATPase, C-terminal RB9927 595524d5b9b59f20b438081dfdfd22c6 466 Gene3D G3DSA:1.10.8.60 364 456 1.8E-34 T 11-11-2016 RB9927 595524d5b9b59f20b438081dfdfd22c6 466 Gene3D G3DSA:3.40.50.300 342 359 6.1E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9927 595524d5b9b59f20b438081dfdfd22c6 466 Gene3D G3DSA:3.40.50.300 113 303 6.1E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9927 595524d5b9b59f20b438081dfdfd22c6 466 Pfam PF07724 AAA domain (Cdc48 subfamily) 161 359 4.0E-45 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB9927 595524d5b9b59f20b438081dfdfd22c6 466 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 55 463 48.21 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RB9927 595524d5b9b59f20b438081dfdfd22c6 466 SUPERFAMILY SSF52540 109 444 4.2E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9927 595524d5b9b59f20b438081dfdfd22c6 466 Pfam PF06689 ClpX C4-type zinc finger 60 97 5.1E-15 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RB9927 595524d5b9b59f20b438081dfdfd22c6 466 SMART SM00994 58 98 2.9E-17 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RB9927 595524d5b9b59f20b438081dfdfd22c6 466 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 57 454 1.3E-179 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RB9927 595524d5b9b59f20b438081dfdfd22c6 466 SUPERFAMILY SSF57716 60 95 2.42E-7 T 11-11-2016 RB9927 595524d5b9b59f20b438081dfdfd22c6 466 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 365 437 6.8E-13 T 11-11-2016 IPR019489 Clp ATPase, C-terminal RB5370 aadfebd3de2765a2ff9741dab63f7480 309 Pfam PF07592 Rhodopirellula transposase DDE domain 3 308 7.4E-109 T 11-11-2016 IPR011518 Transposase, Rhodopirellula-type RB9232 aadfebd3de2765a2ff9741dab63f7480 309 Pfam PF07592 Rhodopirellula transposase DDE domain 3 308 7.4E-109 T 11-11-2016 IPR011518 Transposase, Rhodopirellula-type RB9917 ec63ef18e29902632052daeeefb7c4ff 169 Pfam PF00436 Single-strand binding protein family 4 105 3.3E-33 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RB9917 ec63ef18e29902632052daeeefb7c4ff 169 Gene3D G3DSA:2.40.50.140 1 169 2.7E-43 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB9917 ec63ef18e29902632052daeeefb7c4ff 169 Hamap MF_00984 Single-stranded DNA-binding protein. 4 110 32.672 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RB9917 ec63ef18e29902632052daeeefb7c4ff 169 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 169 2.1E-44 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RB9917 ec63ef18e29902632052daeeefb7c4ff 169 SUPERFAMILY SSF50249 3 169 2.33E-49 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1189 771dc51957369d1c4adf265ac14c9cab 96 SUPERFAMILY SSF46689 3 94 4.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB1189 771dc51957369d1c4adf265ac14c9cab 96 Gene3D G3DSA:1.10.10.60 8 89 6.0E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB1189 771dc51957369d1c4adf265ac14c9cab 96 Pfam PF01527 Transposase 1 77 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB6709 771dc51957369d1c4adf265ac14c9cab 96 SUPERFAMILY SSF46689 3 94 4.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB6709 771dc51957369d1c4adf265ac14c9cab 96 Gene3D G3DSA:1.10.10.60 8 89 6.0E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB6709 771dc51957369d1c4adf265ac14c9cab 96 Pfam PF01527 Transposase 1 77 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB11802 771dc51957369d1c4adf265ac14c9cab 96 SUPERFAMILY SSF46689 3 94 4.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11802 771dc51957369d1c4adf265ac14c9cab 96 Gene3D G3DSA:1.10.10.60 8 89 6.0E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11802 771dc51957369d1c4adf265ac14c9cab 96 Pfam PF01527 Transposase 1 77 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB170 771dc51957369d1c4adf265ac14c9cab 96 SUPERFAMILY SSF46689 3 94 4.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB170 771dc51957369d1c4adf265ac14c9cab 96 Gene3D G3DSA:1.10.10.60 8 89 6.0E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB170 771dc51957369d1c4adf265ac14c9cab 96 Pfam PF01527 Transposase 1 77 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB5888 771dc51957369d1c4adf265ac14c9cab 96 SUPERFAMILY SSF46689 3 94 4.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5888 771dc51957369d1c4adf265ac14c9cab 96 Gene3D G3DSA:1.10.10.60 8 89 6.0E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5888 771dc51957369d1c4adf265ac14c9cab 96 Pfam PF01527 Transposase 1 77 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB11749 771dc51957369d1c4adf265ac14c9cab 96 SUPERFAMILY SSF46689 3 94 4.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11749 771dc51957369d1c4adf265ac14c9cab 96 Gene3D G3DSA:1.10.10.60 8 89 6.0E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11749 771dc51957369d1c4adf265ac14c9cab 96 Pfam PF01527 Transposase 1 77 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB704 771dc51957369d1c4adf265ac14c9cab 96 SUPERFAMILY SSF46689 3 94 4.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB704 771dc51957369d1c4adf265ac14c9cab 96 Gene3D G3DSA:1.10.10.60 8 89 6.0E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB704 771dc51957369d1c4adf265ac14c9cab 96 Pfam PF01527 Transposase 1 77 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB12940 771dc51957369d1c4adf265ac14c9cab 96 SUPERFAMILY SSF46689 3 94 4.3E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB12940 771dc51957369d1c4adf265ac14c9cab 96 Gene3D G3DSA:1.10.10.60 8 89 6.0E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB12940 771dc51957369d1c4adf265ac14c9cab 96 Pfam PF01527 Transposase 1 77 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 PRINTS PR00834 HtrA/DegQ protease family signature 177 197 1.7E-42 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 PRINTS PR00834 HtrA/DegQ protease family signature 154 166 1.7E-42 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 PRINTS PR00834 HtrA/DegQ protease family signature 299 316 1.7E-42 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 PRINTS PR00834 HtrA/DegQ protease family signature 277 294 1.7E-42 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 PRINTS PR00834 HtrA/DegQ protease family signature 406 418 1.7E-42 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 PRINTS PR00834 HtrA/DegQ protease family signature 238 262 1.7E-42 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 SUPERFAMILY SSF50494 114 351 3.87E-49 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 Gene3D G3DSA:2.40.10.10 239 346 6.7E-42 T 11-11-2016 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 Pfam PF13180 PDZ domain 388 458 1.5E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 Pfam PF13365 Trypsin-like peptidase domain 143 306 3.8E-24 T 11-11-2016 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 Gene3D G3DSA:2.30.42.10 347 462 3.0E-22 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 SMART SM00228 345 449 2.5E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 Gene3D G3DSA:2.40.10.10 140 238 1.7E-16 T 11-11-2016 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 SUPERFAMILY SSF50156 388 451 2.0E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9382 65caedb4130ed8eec2e98d8e0ab61003 462 SUPERFAMILY SSF50156 316 357 2.0E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB10035 0cda255b7c64b6f4c5823019277543a4 584 Gene3D G3DSA:2.140.10.10 154 575 3.8E-37 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB10035 0cda255b7c64b6f4c5823019277543a4 584 SUPERFAMILY SSF50998 157 545 2.22E-42 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB10035 0cda255b7c64b6f4c5823019277543a4 584 Pfam PF13360 PQQ-like domain 221 404 2.5E-14 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB3854 99cf8b65f677917fa9b22d281c1d9403 145 Pfam PF10000 ACT domain 7 77 5.9E-23 T 11-11-2016 IPR018717 Domain of unknown function DUF2241 RB3854 99cf8b65f677917fa9b22d281c1d9403 145 Gene3D G3DSA:3.30.2130.10 6 136 7.3E-51 T 11-11-2016 RB3854 99cf8b65f677917fa9b22d281c1d9403 145 SUPERFAMILY SSF55021 76 135 3.95E-20 T 11-11-2016 RB3854 99cf8b65f677917fa9b22d281c1d9403 145 SUPERFAMILY SSF55021 8 73 2.38E-14 T 11-11-2016 RB1895 6514ee8939cd7eb458725e383a1a8161 763 SMART SM00382 325 495 3.5E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1895 6514ee8939cd7eb458725e383a1a8161 763 Gene3D G3DSA:3.40.50.300 573 732 1.1E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1895 6514ee8939cd7eb458725e383a1a8161 763 Pfam PF13087 AAA domain 539 732 4.2E-53 T 11-11-2016 RB1895 6514ee8939cd7eb458725e383a1a8161 763 SUPERFAMILY SSF52540 307 740 1.59E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1895 6514ee8939cd7eb458725e383a1a8161 763 Gene3D G3DSA:3.40.50.300 294 420 1.4E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1895 6514ee8939cd7eb458725e383a1a8161 763 Gene3D G3DSA:3.40.50.300 488 572 1.4E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1895 6514ee8939cd7eb458725e383a1a8161 763 Pfam PF13086 AAA domain 311 530 2.4E-54 T 11-11-2016 RB1895 6514ee8939cd7eb458725e383a1a8161 763 SMART SM00487 307 561 2.1E-5 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB8827 2c7ecd1f1ae60604c3709f33cdfaced3 585 Gene3D G3DSA:3.90.1200.10 295 347 2.2E-8 T 11-11-2016 RB8827 2c7ecd1f1ae60604c3709f33cdfaced3 585 SUPERFAMILY SSF56112 117 178 8.26E-22 T 11-11-2016 IPR011009 Protein kinase-like domain RB8827 2c7ecd1f1ae60604c3709f33cdfaced3 585 SUPERFAMILY SSF56112 212 344 8.26E-22 T 11-11-2016 IPR011009 Protein kinase-like domain RB8827 2c7ecd1f1ae60604c3709f33cdfaced3 585 Pfam PF03109 ABC1 family 132 250 7.6E-27 T 11-11-2016 IPR004147 UbiB domain RB8016 bfc038da99ab7cb0b1d01bc9c82aba21 432 Pfam PF01699 Sodium/calcium exchanger protein 7 159 4.5E-15 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RB8016 bfc038da99ab7cb0b1d01bc9c82aba21 432 Pfam PF01699 Sodium/calcium exchanger protein 232 402 1.8E-14 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RB9192 8553bac91f5b0e3be905b3f693981f6a 456 SUPERFAMILY SSF53649 45 447 8.14E-97 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9192 8553bac91f5b0e3be905b3f693981f6a 456 ProSitePatterns PS00523 Sulfatases signature 1. 92 104 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB9192 8553bac91f5b0e3be905b3f693981f6a 456 Pfam PF00884 Sulfatase 47 355 4.2E-51 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9192 8553bac91f5b0e3be905b3f693981f6a 456 Gene3D G3DSA:3.40.720.10 45 407 2.0E-90 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9245 9d35c5f5ea35d1e787a165507abd8517 356 Gene3D G3DSA:3.40.50.2000 209 347 8.9E-17 T 11-11-2016 RB9245 9d35c5f5ea35d1e787a165507abd8517 356 Gene3D G3DSA:3.40.50.2000 21 168 9.8E-29 T 11-11-2016 RB9245 9d35c5f5ea35d1e787a165507abd8517 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 88 330 1.3E-21 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RB9245 9d35c5f5ea35d1e787a165507abd8517 356 SUPERFAMILY SSF53756 21 347 1.88E-50 T 11-11-2016 RB10659 563b44376d3e3a4c3fdc1e5713fa0532 1276 Pfam PF13514 AAA domain 19 230 2.5E-69 T 11-11-2016 RB10659 563b44376d3e3a4c3fdc1e5713fa0532 1276 SUPERFAMILY SSF52540 435 471 4.38E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10659 563b44376d3e3a4c3fdc1e5713fa0532 1276 SUPERFAMILY SSF52540 1123 1209 4.38E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10659 563b44376d3e3a4c3fdc1e5713fa0532 1276 SUPERFAMILY SSF52540 19 190 4.38E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10659 563b44376d3e3a4c3fdc1e5713fa0532 1276 Gene3D G3DSA:3.40.1140.10 1134 1206 9.1E-16 T 11-11-2016 RB10659 563b44376d3e3a4c3fdc1e5713fa0532 1276 Gene3D G3DSA:3.40.1140.10 18 111 9.1E-16 T 11-11-2016 RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 Gene3D G3DSA:3.40.50.300 449 598 1.9E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 SMART SM00490 481 565 9.1E-15 T 11-11-2016 IPR001650 Helicase, C-terminal RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 Pfam PF00271 Helicase conserved C-terminal domain 465 565 4.9E-15 T 11-11-2016 IPR001650 Helicase, C-terminal RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 SMART SM00487 185 363 6.7E-25 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 Pfam PF00176 SNF2 family N-terminal domain 205 445 2.2E-31 T 11-11-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 SUPERFAMILY SSF52540 164 361 4.29E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 SUPERFAMILY SSF52540 303 343 2.07E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 SUPERFAMILY SSF52540 445 605 2.07E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11712 9ec771f94d679e31d9ee22b7b33e7ba7 647 Gene3D G3DSA:3.40.50.300 183 354 3.5E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12599 6bf33072b5e7de73beed00d198826a58 177 Gene3D G3DSA:3.40.50.360 7 175 1.4E-31 T 11-11-2016 IPR029039 Flavoprotein-like domain RB12599 6bf33072b5e7de73beed00d198826a58 177 Pfam PF03358 NADPH-dependent FMN reductase 7 145 1.2E-23 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RB12599 6bf33072b5e7de73beed00d198826a58 177 SUPERFAMILY SSF52218 7 167 4.19E-30 T 11-11-2016 IPR029039 Flavoprotein-like domain RB3730 d3f16189cf09a453ce274c6f2fa5977e 430 Gene3D G3DSA:2.40.50.100 290 310 3.8E-6 T 11-11-2016 RB3730 d3f16189cf09a453ce274c6f2fa5977e 430 Gene3D G3DSA:2.40.50.100 97 120 3.8E-6 T 11-11-2016 RB3730 d3f16189cf09a453ce274c6f2fa5977e 430 TIGRFAM TIGR02971 heterocyst_DevB: ABC exporter membrane fusion protein, DevB family 75 413 6.6E-117 T 11-11-2016 IPR014315 ABC transporter, membrane fusion protein, DevB type RB3730 d3f16189cf09a453ce274c6f2fa5977e 430 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 225 370 3.7E-8 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB2381 32c62e45936751254b93b41a6448067c 614 Gene3D G3DSA:1.20.1600.10 194 612 2.3E-93 T 11-11-2016 RB2381 32c62e45936751254b93b41a6448067c 614 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 194 612 1.4E-63 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RB2381 32c62e45936751254b93b41a6448067c 614 SUPERFAMILY SSF56954 183 612 2.22E-81 T 11-11-2016 RB2381 32c62e45936751254b93b41a6448067c 614 Pfam PF02321 Outer membrane efflux protein 200 401 1.9E-19 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB2381 32c62e45936751254b93b41a6448067c 614 Pfam PF02321 Outer membrane efflux protein 428 610 7.4E-18 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 Gene3D G3DSA:3.30.930.10 1 231 1.0E-88 T 11-11-2016 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 SUPERFAMILY SSF101353 237 452 9.94E-53 T 11-11-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 944 134.687 T 11-11-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 SMART SM00863 653 696 1.2E-14 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 Pfam PF02272 DHHA1 domain 869 938 1.3E-15 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 SUPERFAMILY SSF50447 444 552 1.55E-15 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 751 4.2E-215 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 SUPERFAMILY SSF55681 2 235 5.72E-88 T 11-11-2016 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 PRINTS PR00980 Alanyl-tRNA synthetase signature 187 198 2.3E-20 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 PRINTS PR00980 Alanyl-tRNA synthetase signature 70 81 2.3E-20 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 PRINTS PR00980 Alanyl-tRNA synthetase signature 266 282 2.3E-20 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 PRINTS PR00980 Alanyl-tRNA synthetase signature 216 229 2.3E-20 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 PRINTS PR00980 Alanyl-tRNA synthetase signature 290 303 2.3E-20 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 Pfam PF01411 tRNA synthetases class II (A) 5 554 3.4E-157 T 11-11-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 696 1.0E-13 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RB8543 f0d7af7b945358dedaff9e17fb8e65ee 945 SUPERFAMILY SSF55186 552 711 1.26E-39 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RB8929 7c055515a21d0c765fddcac62d4cf7e0 510 Gene3D G3DSA:3.30.200.20 72 142 4.0E-22 T 11-11-2016 RB8929 7c055515a21d0c765fddcac62d4cf7e0 510 Gene3D G3DSA:1.10.510.10 143 340 1.0E-49 T 11-11-2016 RB8929 7c055515a21d0c765fddcac62d4cf7e0 510 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 83 111 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB8929 7c055515a21d0c765fddcac62d4cf7e0 510 SMART SM00220 77 343 2.1E-60 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8929 7c055515a21d0c765fddcac62d4cf7e0 510 SUPERFAMILY SSF56112 73 340 7.82E-75 T 11-11-2016 IPR011009 Protein kinase-like domain RB8929 7c055515a21d0c765fddcac62d4cf7e0 510 Pfam PF00069 Protein kinase domain 77 330 2.7E-50 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8929 7c055515a21d0c765fddcac62d4cf7e0 510 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 196 208 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB9549 10d50451670848983be797ca9de80057 1049 Pfam PF00884 Sulfatase 582 925 6.8E-62 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9549 10d50451670848983be797ca9de80057 1049 Pfam PF00884 Sulfatase 31 381 3.1E-51 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9549 10d50451670848983be797ca9de80057 1049 SUPERFAMILY SSF53649 581 688 6.28E-117 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9549 10d50451670848983be797ca9de80057 1049 SUPERFAMILY SSF53649 718 1016 6.28E-117 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9549 10d50451670848983be797ca9de80057 1049 Gene3D G3DSA:3.40.720.10 580 962 1.4E-102 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9549 10d50451670848983be797ca9de80057 1049 SUPERFAMILY SSF49468 503 563 7.06E-9 T 11-11-2016 IPR022772 von Hippel-Lindau disease tumour suppressor, beta/alpha domain RB9549 10d50451670848983be797ca9de80057 1049 ProSitePatterns PS00149 Sulfatases signature 2. 672 682 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB9549 10d50451670848983be797ca9de80057 1049 Gene3D G3DSA:3.30.1120.10 417 466 5.1E-10 T 11-11-2016 RB9549 10d50451670848983be797ca9de80057 1049 Gene3D G3DSA:3.40.720.10 30 402 2.0E-82 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9549 10d50451670848983be797ca9de80057 1049 Gene3D G3DSA:3.30.1120.10 963 1018 3.3E-17 T 11-11-2016 RB9549 10d50451670848983be797ca9de80057 1049 SUPERFAMILY SSF53649 30 466 3.01E-101 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9549 10d50451670848983be797ca9de80057 1049 Gene3D G3DSA:2.60.40.780 500 565 5.4E-10 T 11-11-2016 IPR024053 von Hippel-Lindau disease tumour suppressor, beta domain RB9821 6b26e3254aa1ea85ad09d77f6be9b9b0 180 Gene3D G3DSA:3.40.50.1000 14 165 1.9E-37 T 11-11-2016 IPR023214 HAD-like domain RB9821 6b26e3254aa1ea85ad09d77f6be9b9b0 180 Pfam PF08282 haloacid dehalogenase-like hydrolase 86 149 2.9E-5 T 11-11-2016 IPR023214 HAD-like domain RB9821 6b26e3254aa1ea85ad09d77f6be9b9b0 180 SUPERFAMILY SSF56784 15 171 9.0E-37 T 11-11-2016 IPR023214 HAD-like domain RB9821 6b26e3254aa1ea85ad09d77f6be9b9b0 180 PIRSF PIRSF006118 5 177 2.0E-59 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RB9821 6b26e3254aa1ea85ad09d77f6be9b9b0 180 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 17 166 6.2E-44 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RB11762 520a18e2796fa95f49e6032955213c30 492 Gene3D G3DSA:3.30.360.10 230 442 7.6E-31 T 11-11-2016 RB11762 520a18e2796fa95f49e6032955213c30 492 Gene3D G3DSA:3.40.50.720 67 229 2.7E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11762 520a18e2796fa95f49e6032955213c30 492 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 72 211 1.1E-7 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB11762 520a18e2796fa95f49e6032955213c30 492 SUPERFAMILY SSF51735 66 242 3.16E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11762 520a18e2796fa95f49e6032955213c30 492 SUPERFAMILY SSF55347 221 408 1.02E-19 T 11-11-2016 RB5019 e9c3e58ad99144d0f5fc1f3ede9f7374 457 SUPERFAMILY SSF53448 203 217 1.9E-15 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5019 e9c3e58ad99144d0f5fc1f3ede9f7374 457 SUPERFAMILY SSF53448 15 176 1.9E-15 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5019 e9c3e58ad99144d0f5fc1f3ede9f7374 457 Gene3D G3DSA:3.90.550.10 49 114 3.8E-9 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5019 e9c3e58ad99144d0f5fc1f3ede9f7374 457 Gene3D G3DSA:3.90.550.10 350 433 3.8E-9 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5019 e9c3e58ad99144d0f5fc1f3ede9f7374 457 SUPERFAMILY SSF53448 352 419 3.37E-7 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5019 e9c3e58ad99144d0f5fc1f3ede9f7374 457 SUPERFAMILY SSF53448 286 322 3.37E-7 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB3762 05653648e46e87b275873208e2fe4433 539 Hamap MF_00186 Glycerol kinase [glpK]. 39 532 56.999 T 11-11-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 RB3762 05653648e46e87b275873208e2fe4433 539 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 42 287 2.7E-82 T 11-11-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RB3762 05653648e46e87b275873208e2fe4433 539 Gene3D G3DSA:3.30.420.40 40 288 2.0E-102 T 11-11-2016 RB3762 05653648e46e87b275873208e2fe4433 539 Gene3D G3DSA:3.30.420.40 289 533 1.8E-102 T 11-11-2016 RB3762 05653648e46e87b275873208e2fe4433 539 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 296 485 2.8E-62 T 11-11-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RB3762 05653648e46e87b275873208e2fe4433 539 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 397 417 - T 11-11-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RB3762 05653648e46e87b275873208e2fe4433 539 PIRSF PIRSF000538 39 537 6.7E-184 T 11-11-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RB3762 05653648e46e87b275873208e2fe4433 539 SUPERFAMILY SSF53067 290 532 4.14E-85 T 11-11-2016 RB3762 05653648e46e87b275873208e2fe4433 539 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 41 531 1.3E-221 T 11-11-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 RB3762 05653648e46e87b275873208e2fe4433 539 SUPERFAMILY SSF53067 41 290 4.61E-94 T 11-11-2016 RB3424 13b728e44f02a55611e1e46ea385a894 910 SUPERFAMILY SSF52518 493 720 6.0E-89 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB3424 13b728e44f02a55611e1e46ea385a894 910 Gene3D G3DSA:3.40.50.970 75 487 4.3E-146 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB3424 13b728e44f02a55611e1e46ea385a894 910 Gene3D G3DSA:3.40.50.970 492 725 7.3E-107 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB3424 13b728e44f02a55611e1e46ea385a894 910 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 26 908 0.0 T 11-11-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RB3424 13b728e44f02a55611e1e46ea385a894 910 Gene3D G3DSA:3.40.50.920 727 908 9.1E-68 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RB3424 13b728e44f02a55611e1e46ea385a894 910 SUPERFAMILY SSF52922 723 909 8.3E-56 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RB3424 13b728e44f02a55611e1e46ea385a894 910 PIRSF PIRSF000156 14 910 0.0 T 11-11-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RB3424 13b728e44f02a55611e1e46ea385a894 910 SUPERFAMILY SSF52518 75 489 4.37E-131 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB3424 13b728e44f02a55611e1e46ea385a894 910 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 156 315 3.8E-8 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RB7287 da38e8905765a01d0774da869d87a6ed 349 SUPERFAMILY SSF53850 60 281 3.52E-23 T 11-11-2016 RB7287 da38e8905765a01d0774da869d87a6ed 349 Pfam PF09084 NMT1/THI5 like 67 271 2.6E-30 T 11-11-2016 IPR015168 SsuA/THI5-like RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 SMART SM00962 100 295 1.4E-104 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 Gene3D G3DSA:1.20.120.140 2 88 9.0E-27 T 11-11-2016 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 Pfam PF02978 Signal peptide binding domain 326 425 3.2E-22 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 426 6.0E-151 T 11-11-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 SUPERFAMILY SSF47446 326 428 1.8E-27 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 Pfam PF00448 SRP54-type protein, GTPase domain 100 294 1.1E-72 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 SMART SM00382 99 300 1.7E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 SUPERFAMILY SSF52540 42 353 1.0E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.1E-17 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 SMART SM00963 1 86 4.4E-24 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 Gene3D G3DSA:3.40.50.300 94 296 6.6E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12825 ea8d35e1e522a647a6cf22f7729a2f4d 491 Gene3D G3DSA:1.10.260.30 326 429 3.6E-27 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RB5657 debce3053ef5d7c0bea6cc3b5dd8b535 131 Gene3D G3DSA:3.30.70.900 30 130 1.3E-41 T 11-11-2016 RB5657 debce3053ef5d7c0bea6cc3b5dd8b535 131 SMART SM00886 33 129 4.7E-37 T 11-11-2016 IPR013097 Stress responsive alpha-beta barrel RB5657 debce3053ef5d7c0bea6cc3b5dd8b535 131 SUPERFAMILY SSF54909 30 129 1.79E-32 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB5657 debce3053ef5d7c0bea6cc3b5dd8b535 131 Pfam PF07876 Stress responsive A/B Barrel Domain 33 128 7.8E-33 T 11-11-2016 IPR013097 Stress responsive alpha-beta barrel RB3924 1f082767d12f4dc8daa542fa5cd72ff7 323 Gene3D G3DSA:2.120.10.30 24 310 2.3E-34 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3924 1f082767d12f4dc8daa542fa5cd72ff7 323 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 24 285 4.8E-52 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RB3924 1f082767d12f4dc8daa542fa5cd72ff7 323 SUPERFAMILY SSF63829 23 309 3.6E-25 T 11-11-2016 RB12630 58ece9d4c90570df8ded529f487cd6eb 344 SUPERFAMILY SSF50939 55 280 3.6E-14 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB12630 58ece9d4c90570df8ded529f487cd6eb 344 Gene3D G3DSA:2.120.10.10 41 318 9.1E-12 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB8462 8937c40c5634a5db8fe724ddd10a2a38 153 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 22 39 - T 11-11-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 RB8462 8937c40c5634a5db8fe724ddd10a2a38 153 SUPERFAMILY SSF54637 15 149 6.74E-34 T 11-11-2016 IPR029069 HotDog domain RB8462 8937c40c5634a5db8fe724ddd10a2a38 153 Gene3D G3DSA:3.10.129.10 14 148 1.0E-38 T 11-11-2016 IPR029069 HotDog domain RB8462 8937c40c5634a5db8fe724ddd10a2a38 153 Pfam PF03061 Thioesterase superfamily 32 115 8.1E-10 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 RB4013 311046bb18ac5a552376dc8f9807557e 846 Gene3D G3DSA:3.40.50.300 20 180 6.7E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4013 311046bb18ac5a552376dc8f9807557e 846 Gene3D G3DSA:3.40.50.300 222 366 2.2E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4013 311046bb18ac5a552376dc8f9807557e 846 SMART SM00487 23 211 1.5E-15 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB4013 311046bb18ac5a552376dc8f9807557e 846 Pfam PF00270 DEAD/DEAH box helicase 34 181 3.6E-9 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RB4013 311046bb18ac5a552376dc8f9807557e 846 Pfam PF08482 ATP-dependent helicase C-terminal 702 833 8.1E-41 T 11-11-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal RB4013 311046bb18ac5a552376dc8f9807557e 846 SMART SM00847 412 506 4.5E-9 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 RB4013 311046bb18ac5a552376dc8f9807557e 846 SMART SM00490 255 352 4.2E-14 T 11-11-2016 IPR001650 Helicase, C-terminal RB4013 311046bb18ac5a552376dc8f9807557e 846 Pfam PF00271 Helicase conserved C-terminal domain 233 351 5.9E-12 T 11-11-2016 IPR001650 Helicase, C-terminal RB4013 311046bb18ac5a552376dc8f9807557e 846 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 21 840 2.9E-204 T 11-11-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type RB4013 311046bb18ac5a552376dc8f9807557e 846 Pfam PF04408 Helicase associated domain (HA2) 413 484 3.2E-12 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 RB4013 311046bb18ac5a552376dc8f9807557e 846 SUPERFAMILY SSF52540 33 362 5.65E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4013 311046bb18ac5a552376dc8f9807557e 846 PIRSF PIRSF005496 16 846 3.5E-240 T 11-11-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 SUPERFAMILY SSF50156 987 1070 2.37E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Gene3D G3DSA:2.130.10.10 72 411 7.2E-58 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Gene3D G3DSA:2.30.42.10 1000 1073 2.0E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 SUPERFAMILY SSF82171 73 383 6.02E-38 T 11-11-2016 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Pfam PF13180 PDZ domain 1003 1069 7.4E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Gene3D G3DSA:3.40.630.10 712 967 3.8E-49 T 11-11-2016 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Gene3D G3DSA:3.40.630.10 447 505 3.8E-49 T 11-11-2016 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 SMART SM00228 988 1061 1.4E-4 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Pfam PF07676 WD40-like Beta Propeller Repeat 356 383 0.077 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Pfam PF07676 WD40-like Beta Propeller Repeat 200 228 4.1E-5 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Pfam PF07676 WD40-like Beta Propeller Repeat 263 291 1.0E-8 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Pfam PF07676 WD40-like Beta Propeller Repeat 75 113 7.6E-5 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 SUPERFAMILY SSF53187 853 958 3.91E-47 T 11-11-2016 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 SUPERFAMILY SSF53187 449 494 3.91E-47 T 11-11-2016 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 SUPERFAMILY SSF53187 697 824 3.91E-47 T 11-11-2016 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 Pfam PF04389 Peptidase family M28 713 957 1.4E-56 T 11-11-2016 IPR007484 Peptidase M28 RB6120 015bd35cdb39f9bedbc022948691dcd4 1074 SUPERFAMILY SSF52025 525 671 1.96E-5 T 11-11-2016 RB6876 b67e6c3f5a0c852ee6ded9e325cb35bc 392 SUPERFAMILY SSF52266 122 201 6.06E-31 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6876 b67e6c3f5a0c852ee6ded9e325cb35bc 392 SUPERFAMILY SSF52266 250 371 6.06E-31 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6876 b67e6c3f5a0c852ee6ded9e325cb35bc 392 Gene3D G3DSA:3.40.50.1110 247 373 1.1E-33 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6876 b67e6c3f5a0c852ee6ded9e325cb35bc 392 Gene3D G3DSA:3.40.50.1110 122 198 1.1E-33 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6876 b67e6c3f5a0c852ee6ded9e325cb35bc 392 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 125 363 1.5E-21 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB522 1d22415a1f620a5fd0f166c369a31aae 391 Pfam PF13377 Periplasmic binding protein-like domain 114 278 1.3E-35 T 11-11-2016 RB522 1d22415a1f620a5fd0f166c369a31aae 391 Gene3D G3DSA:1.10.10.60 285 339 4.9E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB522 1d22415a1f620a5fd0f166c369a31aae 391 Gene3D G3DSA:1.10.10.60 340 389 5.7E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB522 1d22415a1f620a5fd0f166c369a31aae 391 SUPERFAMILY SSF46689 338 389 1.12E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB522 1d22415a1f620a5fd0f166c369a31aae 391 Pfam PF12833 Helix-turn-helix domain 310 386 3.0E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB522 1d22415a1f620a5fd0f166c369a31aae 391 SMART SM00342 302 385 1.2E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB522 1d22415a1f620a5fd0f166c369a31aae 391 Gene3D G3DSA:3.40.50.2300 15 118 5.4E-7 T 11-11-2016 RB522 1d22415a1f620a5fd0f166c369a31aae 391 SUPERFAMILY SSF53822 61 296 4.48E-28 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB522 1d22415a1f620a5fd0f166c369a31aae 391 Gene3D G3DSA:3.40.50.2300 119 256 9.3E-21 T 11-11-2016 RB6425 e97b3eec794f14b835ebd1e80cb6455e 50 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 41 3.0E-4 T 11-11-2016 RB6425 e97b3eec794f14b835ebd1e80cb6455e 50 Pfam PF00444 Ribosomal protein L36 1 41 8.0E-17 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6425 e97b3eec794f14b835ebd1e80cb6455e 50 SUPERFAMILY SSF57840 1 41 1.57E-13 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6425 e97b3eec794f14b835ebd1e80cb6455e 50 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.419 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6425 e97b3eec794f14b835ebd1e80cb6455e 50 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB6425 e97b3eec794f14b835ebd1e80cb6455e 50 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.7E-9 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB1831 d4e6d39916af88ed9a569a048c521fef 471 Pfam PF11973 NQRA C-terminal domain 285 335 8.9E-20 T 11-11-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 RB1831 d4e6d39916af88ed9a569a048c521fef 471 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 24 471 4.9E-169 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 RB1831 d4e6d39916af88ed9a569a048c521fef 471 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 22 471 46.363 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 RB1831 d4e6d39916af88ed9a569a048c521fef 471 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 24 280 8.0E-104 T 11-11-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 RB5774 84400d8606124a3b6baf2e53f2793c06 528 SUPERFAMILY SSF103365 60 521 3.92E-108 T 11-11-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RB5774 84400d8606124a3b6baf2e53f2793c06 528 Pfam PF01139 tRNA-splicing ligase RtcB 80 521 1.7E-86 T 11-11-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RB10252 aead5cd73e3ca1ec29c582ce7de9e033 386 Gene3D G3DSA:3.40.630.30 229 369 1.1E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10252 aead5cd73e3ca1ec29c582ce7de9e033 386 SUPERFAMILY SSF55729 200 372 4.63E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10252 aead5cd73e3ca1ec29c582ce7de9e033 386 Pfam PF00583 Acetyltransferase (GNAT) family 295 369 2.8E-7 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB4502 edceb5cc2983a902da41c2a34b3c9eb1 59 Pfam PF01679 Proteolipid membrane potential modulator 11 58 1.2E-15 T 11-11-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 RB4502 edceb5cc2983a902da41c2a34b3c9eb1 59 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 15 30 - T 11-11-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 RB7515 cee1600c5248f792f8b3acca1aad0353 362 SUPERFAMILY SSF53067 48 166 2.88E-13 T 11-11-2016 RB7515 cee1600c5248f792f8b3acca1aad0353 362 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 50 355 2.3E-39 T 11-11-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 RB7515 cee1600c5248f792f8b3acca1aad0353 362 Gene3D G3DSA:3.30.420.40 267 339 4.2E-4 T 11-11-2016 RB7515 cee1600c5248f792f8b3acca1aad0353 362 SUPERFAMILY SSF53067 172 348 2.29E-45 T 11-11-2016 RB3729 b60aae4f6f6421b1eed6208fd219771a 397 SMART SM00100 275 395 5.3E-12 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain RB3729 b60aae4f6f6421b1eed6208fd219771a 397 Pfam PF00027 Cyclic nucleotide-binding domain 298 382 6.9E-18 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain RB3729 b60aae4f6f6421b1eed6208fd219771a 397 Gene3D G3DSA:2.60.120.10 258 390 6.7E-29 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB3729 b60aae4f6f6421b1eed6208fd219771a 397 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 302 318 - T 11-11-2016 IPR018488 Cyclic nucleotide-binding, conserved site RB3729 b60aae4f6f6421b1eed6208fd219771a 397 Gene3D G3DSA:3.40.50.300 35 257 4.7E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3729 b60aae4f6f6421b1eed6208fd219771a 397 SUPERFAMILY SSF52540 36 262 7.79E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3729 b60aae4f6f6421b1eed6208fd219771a 397 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB3729 b60aae4f6f6421b1eed6208fd219771a 397 PRINTS PR00103 cAMP-dependent protein kinase signature 296 310 7.2E-7 T 11-11-2016 RB3729 b60aae4f6f6421b1eed6208fd219771a 397 PRINTS PR00103 cAMP-dependent protein kinase signature 311 325 7.2E-7 T 11-11-2016 RB3729 b60aae4f6f6421b1eed6208fd219771a 397 PRINTS PR00103 cAMP-dependent protein kinase signature 355 366 7.2E-7 T 11-11-2016 RB3729 b60aae4f6f6421b1eed6208fd219771a 397 PRINTS PR00103 cAMP-dependent protein kinase signature 343 352 7.2E-7 T 11-11-2016 RB3729 b60aae4f6f6421b1eed6208fd219771a 397 SMART SM00382 64 253 9.4E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3729 b60aae4f6f6421b1eed6208fd219771a 397 Pfam PF00005 ABC transporter 56 205 1.3E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB3729 b60aae4f6f6421b1eed6208fd219771a 397 TIGRFAM TIGR02982 heterocyst_DevA: ABC exporter ATP-binding subunit, DevA family 36 254 4.0E-106 T 11-11-2016 IPR014324 ABC transporter ATP-binding subunit, DevA type RB3729 b60aae4f6f6421b1eed6208fd219771a 397 SUPERFAMILY SSF51206 265 384 1.83E-26 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like RB3303 dcaf842a65b1e887b2f844e38dd77e1d 420 Gene3D G3DSA:1.10.150.280 325 356 0.001 T 11-11-2016 RB3303 dcaf842a65b1e887b2f844e38dd77e1d 420 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 8 404 4.3E-176 T 11-11-2016 IPR023874 DNA modification/repair radical SAM protein, putative RB3303 dcaf842a65b1e887b2f844e38dd77e1d 420 SUPERFAMILY SSF47781 304 380 2.59E-12 T 11-11-2016 IPR010994 RuvA domain 2-like RB3303 dcaf842a65b1e887b2f844e38dd77e1d 420 SUPERFAMILY SSF102114 46 278 5.49E-14 T 11-11-2016 RB3303 dcaf842a65b1e887b2f844e38dd77e1d 420 Gene3D G3DSA:3.80.30.20 64 289 5.8E-12 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB2986 5f7daff254cdecad8f26386dc9166108 586 Pfam PF11941 Domain of unknown function (DUF3459) 487 561 1.7E-10 T 11-11-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) RB2986 5f7daff254cdecad8f26386dc9166108 586 Gene3D G3DSA:3.90.400.10 156 226 1.2E-31 T 11-11-2016 RB2986 5f7daff254cdecad8f26386dc9166108 586 Gene3D G3DSA:3.20.20.80 227 503 2.3E-111 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB2986 5f7daff254cdecad8f26386dc9166108 586 Gene3D G3DSA:3.20.20.80 54 155 2.3E-111 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB2986 5f7daff254cdecad8f26386dc9166108 586 SMART SM00642 64 443 1.9E-134 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB2986 5f7daff254cdecad8f26386dc9166108 586 SUPERFAMILY SSF51445 54 501 1.09E-140 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB2986 5f7daff254cdecad8f26386dc9166108 586 Pfam PF00128 Alpha amylase, catalytic domain 79 415 6.2E-94 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB2986 5f7daff254cdecad8f26386dc9166108 586 SUPERFAMILY SSF51011 504 573 1.25E-10 T 11-11-2016 RB2986 5f7daff254cdecad8f26386dc9166108 586 Gene3D G3DSA:2.60.40.1180 504 575 3.1E-12 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta RB11489 bfb7411ae3661b405dc5771b62bdf071 250 Gene3D G3DSA:2.40.30.10 3 102 1.2E-34 T 11-11-2016 RB11489 bfb7411ae3661b405dc5771b62bdf071 250 Pfam PF04954 Siderophore-interacting protein 111 229 6.1E-33 T 11-11-2016 IPR007037 Siderophore-interacting protein RB11489 bfb7411ae3661b405dc5771b62bdf071 250 Gene3D G3DSA:3.40.50.80 107 245 1.1E-41 T 11-11-2016 RB11489 bfb7411ae3661b405dc5771b62bdf071 250 SUPERFAMILY SSF63380 4 101 9.27E-12 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB11489 bfb7411ae3661b405dc5771b62bdf071 250 Pfam PF08021 Siderophore-interacting FAD-binding domain 52 102 2.2E-17 T 11-11-2016 IPR013113 FAD-binding 9, siderophore-interacting RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 SUPERFAMILY SSF52374 6 319 3.49E-76 T 11-11-2016 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 Gene3D G3DSA:3.40.50.620 196 245 1.2E-38 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 Gene3D G3DSA:3.40.50.620 6 69 1.2E-38 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 Gene3D G3DSA:1.10.1160.10 248 322 9.3E-8 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 Gene3D G3DSA:3.90.800.10 70 185 6.7E-18 T 11-11-2016 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 3.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 3.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 3.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 3.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 3.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 5 319 37.513 T 11-11-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RB13261 10a0d5d696073a0f976810b94bb0b9e3 329 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 281 7.1E-46 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 RB8540 3cc2224877df3d4182fa45dbfd9180a2 139 Gene3D G3DSA:3.40.630.30 2 124 2.6E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB8540 3cc2224877df3d4182fa45dbfd9180a2 139 SUPERFAMILY SSF55729 1 117 4.51E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB8540 3cc2224877df3d4182fa45dbfd9180a2 139 Pfam PF00583 Acetyltransferase (GNAT) family 49 116 1.3E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB8368 72607b18c8294bd533ac716515398f70 323 SUPERFAMILY SSF52821 122 271 8.23E-32 T 11-11-2016 IPR001763 Rhodanese-like domain RB8368 72607b18c8294bd533ac716515398f70 323 Pfam PF00581 Rhodanese-like domain 147 240 3.3E-8 T 11-11-2016 IPR001763 Rhodanese-like domain RB8368 72607b18c8294bd533ac716515398f70 323 Hamap MF_00469 UPF0176 protein YceA [yceA]. 26 284 43.418 T 11-11-2016 IPR020936 Uncharacterised protein family UPF0176 RB8368 72607b18c8294bd533ac716515398f70 323 SMART SM00450 143 244 5.9E-22 T 11-11-2016 IPR001763 Rhodanese-like domain RB8368 72607b18c8294bd533ac716515398f70 323 Gene3D G3DSA:3.40.250.10 133 256 4.1E-40 T 11-11-2016 IPR001763 Rhodanese-like domain RB8290 566e41fef32fd50690c688aa3c91cd4e 413 SUPERFAMILY SSF81324 57 193 9.68E-16 T 11-11-2016 RB8290 566e41fef32fd50690c688aa3c91cd4e 413 Pfam PF07885 Ion channel 76 148 4.6E-11 T 11-11-2016 IPR013099 Potassium channel domain RB8290 566e41fef32fd50690c688aa3c91cd4e 413 Gene3D G3DSA:3.40.50.720 165 302 7.6E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8290 566e41fef32fd50690c688aa3c91cd4e 413 Gene3D G3DSA:1.10.287.70 69 148 9.5E-9 T 11-11-2016 RB8290 566e41fef32fd50690c688aa3c91cd4e 413 SUPERFAMILY SSF51735 168 309 9.98E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8290 566e41fef32fd50690c688aa3c91cd4e 413 Pfam PF02254 TrkA-N domain 173 286 1.3E-32 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RB8290 566e41fef32fd50690c688aa3c91cd4e 413 Pfam PF02080 TrkA-C domain 329 396 1.2E-15 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB8290 566e41fef32fd50690c688aa3c91cd4e 413 Gene3D G3DSA:3.30.70.1450 325 397 1.7E-14 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB8290 566e41fef32fd50690c688aa3c91cd4e 413 SUPERFAMILY SSF116726 321 395 6.8E-15 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB10985 03d2b57fad6e5af88bc2e9976c5ef5fe 207 SMART SM00471 23 137 2.7E-8 T 11-11-2016 IPR003607 HD/PDEase domain RB10985 03d2b57fad6e5af88bc2e9976c5ef5fe 207 Pfam PF01966 HD domain 28 127 2.0E-14 T 11-11-2016 IPR006674 HD domain RB10985 03d2b57fad6e5af88bc2e9976c5ef5fe 207 Gene3D G3DSA:1.10.3210.10 5 141 8.4E-43 T 11-11-2016 IPR006674 HD domain RB10985 03d2b57fad6e5af88bc2e9976c5ef5fe 207 Gene3D G3DSA:1.10.3210.10 177 205 8.4E-43 T 11-11-2016 IPR006674 HD domain RB10985 03d2b57fad6e5af88bc2e9976c5ef5fe 207 SUPERFAMILY SSF109604 6 205 4.19E-54 T 11-11-2016 RB11405 67fd0d73054691c9bb4380f9089c0c34 246 Pfam PF13395 HNH endonuclease 121 167 7.1E-6 T 11-11-2016 IPR003615 HNH nuclease RB11405 67fd0d73054691c9bb4380f9089c0c34 246 SMART SM00507 108 161 3.2E-5 T 11-11-2016 IPR003615 HNH nuclease RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 155 239 7.9E-18 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 Gene3D G3DSA:1.10.8.50 156 294 8.7E-34 T 11-11-2016 RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 SUPERFAMILY SSF81624 35 156 6.15E-20 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 SMART SM00898 35 141 6.1E-16 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 SUPERFAMILY SSF46946 155 238 3.4E-21 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 34 124 9.6E-7 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 Gene3D G3DSA:3.20.190.10 35 155 2.7E-12 T 11-11-2016 RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 SUPERFAMILY SSF57716 261 293 9.98E-7 T 11-11-2016 RB12746 06cafeed9d7dc1d42e5b62f4ee737fa6 294 SMART SM01232 155 246 2.1E-25 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RB3476 ada827b694f2e9f98792a6dcb35dd431 331 Gene3D G3DSA:3.40.1700.10 177 305 2.9E-24 T 11-11-2016 RB3476 ada827b694f2e9f98792a6dcb35dd431 331 PIRSF PIRSF019073 17 317 4.3E-123 T 11-11-2016 IPR014499 Uncharacterised conserved protein UCP019073 RB3476 ada827b694f2e9f98792a6dcb35dd431 331 SUPERFAMILY SSF143597 142 305 7.85E-30 T 11-11-2016 RB3476 ada827b694f2e9f98792a6dcb35dd431 331 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 177 301 2.3E-21 T 11-11-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal RB4578 6f937c20f4f552c5809f50d99fc18cc5 430 Pfam PF03471 Transporter associated domain 345 422 4.1E-22 T 11-11-2016 IPR005170 Transporter-associated domain RB4578 6f937c20f4f552c5809f50d99fc18cc5 430 SUPERFAMILY SSF54631 202 342 4.67E-30 T 11-11-2016 RB4578 6f937c20f4f552c5809f50d99fc18cc5 430 Gene3D G3DSA:3.10.580.10 193 337 1.9E-17 T 11-11-2016 RB4578 6f937c20f4f552c5809f50d99fc18cc5 430 SMART SM01091 344 423 5.1E-24 T 11-11-2016 IPR005170 Transporter-associated domain RB4578 6f937c20f4f552c5809f50d99fc18cc5 430 Gene3D G3DSA:3.30.465.10 338 422 1.7E-23 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RB4578 6f937c20f4f552c5809f50d99fc18cc5 430 Pfam PF00571 CBS domain 207 265 1.4E-4 T 11-11-2016 IPR000644 CBS domain RB4578 6f937c20f4f552c5809f50d99fc18cc5 430 SUPERFAMILY SSF56176 339 421 8.45E-21 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RB1356 0b2f3a2e8460fb4b23c356fc06d4cb87 303 SUPERFAMILY SSF51556 4 300 4.63E-60 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB1356 0b2f3a2e8460fb4b23c356fc06d4cb87 303 Gene3D G3DSA:3.20.20.140 4 301 7.2E-68 T 11-11-2016 RB10590 b83115b27715f509ff94aa2d8cbf3b58 532 Pfam PF01757 Acyltransferase family 12 486 4.3E-144 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 RB10590 b83115b27715f509ff94aa2d8cbf3b58 532 Gene3D G3DSA:1.25.40.20 144 230 7.2E-13 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB10590 b83115b27715f509ff94aa2d8cbf3b58 532 SUPERFAMILY SSF48403 132 221 1.08E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB10271 565453872df1e2bafdf2ddbefc0c0cae 158 Hamap MF_00042 Ribonuclease H [rnhA]. 10 158 29.041 T 11-11-2016 IPR022892 Ribonuclease H GO:0004523 RB10271 565453872df1e2bafdf2ddbefc0c0cae 158 SUPERFAMILY SSF53098 12 156 9.36E-51 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB10271 565453872df1e2bafdf2ddbefc0c0cae 158 Gene3D G3DSA:3.30.420.10 13 156 7.9E-52 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB10271 565453872df1e2bafdf2ddbefc0c0cae 158 Pfam PF00075 RNase H 12 153 6.8E-45 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RB8038 1e6139e611d4c2903094642530259a59 1381 Pfam PF01968 Hydantoinase/oxoprolinase 343 621 2.7E-80 T 11-11-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 RB8038 1e6139e611d4c2903094642530259a59 1381 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 203 324 9.1E-34 T 11-11-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 RB8038 1e6139e611d4c2903094642530259a59 1381 Pfam PF02538 Hydantoinase B/oxoprolinase 851 1371 1.1E-171 T 11-11-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.0E-8 T 11-11-2016 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.0E-8 T 11-11-2016 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 2.0E-8 T 11-11-2016 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 SUPERFAMILY SSF51905 4 347 4.66E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 Gene3D G3DSA:3.50.50.60 107 343 5.8E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 Gene3D G3DSA:3.50.50.60 5 106 1.8E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 336 1.8E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.3E-6 T 11-11-2016 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 162 187 2.3E-6 T 11-11-2016 RB5766 56c2dc1d8f5450479249fa7ffc3c793e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.3E-6 T 11-11-2016 RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 SUPERFAMILY SSF53335 45 552 5.72E-125 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 317 323 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 344 368 5.7E-20 T 11-11-2016 RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 314 326 5.7E-20 T 11-11-2016 RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 206 222 5.7E-20 T 11-11-2016 RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 230 244 5.7E-20 T 11-11-2016 RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 Gene3D G3DSA:3.40.50.150 209 444 7.9E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 Pfam PF02384 N-6 DNA Methylase 184 520 3.9E-59 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RB11618 8c9ffd3a7c1d740aca9ba9958e005351 552 Pfam PF12161 HsdM N-terminal domain 46 177 2.5E-19 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RB11135 4cf6a0f48b901ca099ef833e7ccd46a1 225 SUPERFAMILY SSF88659 145 220 5.79E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11135 4cf6a0f48b901ca099ef833e7ccd46a1 225 Gene3D G3DSA:1.10.1740.10 29 131 2.0E-13 T 11-11-2016 RB11135 4cf6a0f48b901ca099ef833e7ccd46a1 225 Gene3D G3DSA:1.10.10.10 163 220 3.3E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11135 4cf6a0f48b901ca099ef833e7ccd46a1 225 TIGRFAM TIGR02984 Sig-70_plancto1: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 34 221 1.6E-80 T 11-11-2016 IPR014326 RNA polymerase sigma-70 factor, Planctomycetaceae RB11135 4cf6a0f48b901ca099ef833e7ccd46a1 225 SUPERFAMILY SSF88946 23 123 2.98E-12 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11135 4cf6a0f48b901ca099ef833e7ccd46a1 225 Pfam PF04542 Sigma-70 region 2 63 116 9.7E-5 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11135 4cf6a0f48b901ca099ef833e7ccd46a1 225 Pfam PF08281 Sigma-70, region 4 167 215 5.4E-11 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11135 4cf6a0f48b901ca099ef833e7ccd46a1 225 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 63 218 4.1E-17 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8238 da4a4a7f0dd21f84eb44a48fe7f98a47 198 Pfam PF00578 AhpC/TSA family 5 138 1.2E-36 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB8238 da4a4a7f0dd21f84eb44a48fe7f98a47 198 SUPERFAMILY SSF52833 4 192 5.96E-68 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8238 da4a4a7f0dd21f84eb44a48fe7f98a47 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 159 192 1.6E-10 T 11-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB8238 da4a4a7f0dd21f84eb44a48fe7f98a47 198 Gene3D G3DSA:3.40.30.10 4 192 3.7E-74 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8238 da4a4a7f0dd21f84eb44a48fe7f98a47 198 PIRSF PIRSF000239 1 197 8.2E-59 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB13257 53863d588d88dc9e32563b66764204d6 286 Pfam PF00561 alpha/beta hydrolase fold 35 264 2.9E-27 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB13257 53863d588d88dc9e32563b66764204d6 286 PRINTS PR00412 Epoxide hydrolase signature 118 131 2.9E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB13257 53863d588d88dc9e32563b66764204d6 286 PRINTS PR00412 Epoxide hydrolase signature 104 117 2.9E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB13257 53863d588d88dc9e32563b66764204d6 286 PRINTS PR00412 Epoxide hydrolase signature 256 278 2.9E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB13257 53863d588d88dc9e32563b66764204d6 286 PRINTS PR00412 Epoxide hydrolase signature 40 58 2.9E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB13257 53863d588d88dc9e32563b66764204d6 286 SUPERFAMILY SSF53474 23 281 3.57E-69 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB13257 53863d588d88dc9e32563b66764204d6 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 225 239 1.4E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB13257 53863d588d88dc9e32563b66764204d6 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.4E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB13257 53863d588d88dc9e32563b66764204d6 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 1.4E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB13257 53863d588d88dc9e32563b66764204d6 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 1.4E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB13257 53863d588d88dc9e32563b66764204d6 286 Gene3D G3DSA:3.40.50.1820 9 280 8.2E-68 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4081 422f8ec00d21cae49d2e7ede68da7f42 379 SMART SM00382 97 238 0.0087 T 11-11-2016 IPR003593 AAA+ ATPase domain RB4081 422f8ec00d21cae49d2e7ede68da7f42 379 PIRSF PIRSF002849 37 379 9.5E-129 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB4081 422f8ec00d21cae49d2e7ede68da7f42 379 SUPERFAMILY SSF52540 64 351 2.97E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4081 422f8ec00d21cae49d2e7ede68da7f42 379 Gene3D G3DSA:1.10.8.300 268 371 7.5E-29 T 11-11-2016 RB4081 422f8ec00d21cae49d2e7ede68da7f42 379 Gene3D G3DSA:3.40.50.300 82 246 5.2E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4081 422f8ec00d21cae49d2e7ede68da7f42 379 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 100 230 1.0E-61 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 ProSitePatterns PS00217 Sugar transport proteins signature 2. 142 167 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 36 476 1.4E-113 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 ProSitePatterns PS00216 Sugar transport proteins signature 1. 341 358 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 Gene3D G3DSA:1.20.1250.20 50 230 1.2E-25 T 11-11-2016 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 Gene3D G3DSA:1.20.1250.20 288 475 1.8E-22 T 11-11-2016 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 SUPERFAMILY SSF103473 29 477 7.59E-74 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 Pfam PF00083 Sugar (and other) transporter 48 478 2.3E-106 T 11-11-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 PRINTS PR00171 Sugar transporter signature 297 307 1.2E-20 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 PRINTS PR00171 Sugar transporter signature 137 156 1.2E-20 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 PRINTS PR00171 Sugar transporter signature 54 64 1.2E-20 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 PRINTS PR00171 Sugar transporter signature 381 402 1.2E-20 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RB10309 3c0020d62d6552b9204f4f59ec9a5873 484 PRINTS PR00171 Sugar transporter signature 404 416 1.2E-20 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 PIRSF PIRSF000102 1 311 2.7E-104 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 304 1.2E-28 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 Gene3D G3DSA:3.40.50.720 2 145 1.9E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 SUPERFAMILY SSF56327 148 306 2.74E-53 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 Gene3D G3DSA:3.90.110.10 147 309 1.2E-57 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 3.5E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 3.5E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 3.5E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 3.5E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 3.5E-25 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 145 1.7E-40 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 SUPERFAMILY SSF51735 5 145 1.48E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 307 1.3E-139 T 11-11-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RB7652 a38c50aa3e2ab1d665d18857dcc965ec 315 Hamap MF_00487 Malate dehydrogenase [mdh]. 3 310 45.579 T 11-11-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RB818 cb2eacd385b5aab06a13ce470f036e8e 459 Gene3D G3DSA:3.30.70.270 253 341 6.0E-4 T 11-11-2016 RB818 cb2eacd385b5aab06a13ce470f036e8e 459 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 133 341 1.3E-44 T 11-11-2016 IPR000477 Reverse transcriptase domain RB818 cb2eacd385b5aab06a13ce470f036e8e 459 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 78 418 9.5E-114 T 11-11-2016 IPR030931 Group II intron reverse transcriptase/maturase RB818 cb2eacd385b5aab06a13ce470f036e8e 459 Pfam PF08388 Group II intron, maturase-specific domain 355 431 3.0E-16 T 11-11-2016 IPR013597 Group II intron, maturase-specific RB818 cb2eacd385b5aab06a13ce470f036e8e 459 SUPERFAMILY SSF56672 74 414 5.56E-47 T 11-11-2016 RB9587 0caec8bd2bad1014f4dcc8d58ab1856a 660 Pfam PF04434 SWIM zinc finger 62 94 5.3E-4 T 11-11-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 RB5778 5130a06bcdd056ef1dd82db854a908a2 628 Pfam PF00245 Alkaline phosphatase 307 620 6.6E-34 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RB5778 5130a06bcdd056ef1dd82db854a908a2 628 SMART SM00098 200 628 2.9E-4 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RB5778 5130a06bcdd056ef1dd82db854a908a2 628 ProSitePatterns PS00123 Alkaline phosphatase active site. 310 318 - T 11-11-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RB5778 5130a06bcdd056ef1dd82db854a908a2 628 Gene3D G3DSA:3.40.720.10 311 611 2.7E-80 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5778 5130a06bcdd056ef1dd82db854a908a2 628 Gene3D G3DSA:3.40.720.10 190 256 2.7E-80 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5778 5130a06bcdd056ef1dd82db854a908a2 628 SUPERFAMILY SSF53649 181 253 3.02E-66 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5778 5130a06bcdd056ef1dd82db854a908a2 628 SUPERFAMILY SSF53649 308 612 3.02E-66 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB925 db62321119f8a66acd7851d990570ebe 375 Pfam PF14319 Transposase zinc-binding domain 7 114 9.2E-35 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB925 db62321119f8a66acd7851d990570ebe 375 Pfam PF04986 Putative transposase 141 312 3.4E-50 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB10367 eeeae742809667ab95f634af900e665b 1097 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 158 170 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB10367 eeeae742809667ab95f634af900e665b 1097 SUPERFAMILY SSF56112 34 288 8.75E-49 T 11-11-2016 IPR011009 Protein kinase-like domain RB10367 eeeae742809667ab95f634af900e665b 1097 Gene3D G3DSA:3.30.200.20 34 121 1.2E-11 T 11-11-2016 RB10367 eeeae742809667ab95f634af900e665b 1097 SMART SM00220 37 286 3.2E-31 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10367 eeeae742809667ab95f634af900e665b 1097 Pfam PF00069 Protein kinase domain 37 258 2.2E-28 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10367 eeeae742809667ab95f634af900e665b 1097 Pfam PF13809 Tubulin like 334 547 1.2E-16 T 11-11-2016 IPR025904 Tubulin-like RB10367 eeeae742809667ab95f634af900e665b 1097 Gene3D G3DSA:1.10.510.10 122 312 3.7E-29 T 11-11-2016 RB11857 55e5e6df142e7ce6dd7f150aa0816fdc 101 Pfam PF04341 Protein of unknown function, DUF485 27 88 6.9E-11 T 11-11-2016 IPR007436 Protein of unknown function DUF485 RB11981 af6f8c4f807209635d61e859f696e6df 317 Gene3D G3DSA:3.40.50.1980 169 293 2.9E-21 T 11-11-2016 RB11981 af6f8c4f807209635d61e859f696e6df 317 SUPERFAMILY SSF53807 3 293 1.96E-41 T 11-11-2016 RB11981 af6f8c4f807209635d61e859f696e6df 317 Pfam PF01497 Periplasmic binding protein 3 268 1.6E-16 T 11-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RB11981 af6f8c4f807209635d61e859f696e6df 317 Gene3D G3DSA:3.40.50.1980 3 150 1.8E-20 T 11-11-2016 RB3656 cacbf427cb16f165879f953c06f423a8 313 SUPERFAMILY SSF102198 61 312 5.1E-28 T 11-11-2016 RB3656 cacbf427cb16f165879f953c06f423a8 313 Gene3D G3DSA:3.50.30.50 60 312 4.8E-34 T 11-11-2016 RB3656 cacbf427cb16f165879f953c06f423a8 313 Pfam PF04199 Putative cyclase 64 248 1.1E-28 T 11-11-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734 RB10894 91c2bd4247f867ec1de77aa149a11c3e 456 TIGRFAM TIGR00260 thrC: threonine synthase 90 409 2.2E-71 T 11-11-2016 IPR004450 Threonine synthase-like RB10894 91c2bd4247f867ec1de77aa149a11c3e 456 Gene3D G3DSA:3.40.50.1100 225 409 9.0E-23 T 11-11-2016 RB10894 91c2bd4247f867ec1de77aa149a11c3e 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 98 404 4.0E-64 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB10894 91c2bd4247f867ec1de77aa149a11c3e 456 SUPERFAMILY SSF53686 16 451 4.32E-112 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB10894 91c2bd4247f867ec1de77aa149a11c3e 456 Gene3D G3DSA:3.40.50.1100 134 224 5.3E-34 T 11-11-2016 RB12518 5b5febd62a793bd6d99ee095117656b1 725 Pfam PF13437 HlyD family secretion protein 575 687 1.5E-13 T 11-11-2016 RB12518 5b5febd62a793bd6d99ee095117656b1 725 Pfam PF13533 Biotin-lipoyl like 481 512 5.0E-6 T 11-11-2016 RB10392 db19924a7cf6583c7b13b812bfdce405 971 SUPERFAMILY SSF52047 249 319 2.9E-23 T 11-11-2016 RB10392 db19924a7cf6583c7b13b812bfdce405 971 SUPERFAMILY SSF52047 484 564 2.9E-23 T 11-11-2016 RB10392 db19924a7cf6583c7b13b812bfdce405 971 SUPERFAMILY SSF52047 647 854 2.9E-23 T 11-11-2016 RB10392 db19924a7cf6583c7b13b812bfdce405 971 Gene3D G3DSA:3.80.10.10 491 613 5.7E-9 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB10392 db19924a7cf6583c7b13b812bfdce405 971 SUPERFAMILY SSF52058 226 454 2.38E-13 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB10392 db19924a7cf6583c7b13b812bfdce405 971 Gene3D G3DSA:3.80.10.10 668 841 3.7E-19 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB10392 db19924a7cf6583c7b13b812bfdce405 971 Gene3D G3DSA:3.80.10.10 200 463 4.2E-12 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB4752 5bc089639d81e8ba31b272a470785aba 359 SUPERFAMILY SSF51395 16 313 1.2E-44 T 11-11-2016 RB4752 5bc089639d81e8ba31b272a470785aba 359 Pfam PF01180 Dihydroorotate dehydrogenase 18 298 5.6E-10 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RB4752 5bc089639d81e8ba31b272a470785aba 359 Gene3D G3DSA:3.20.20.70 19 302 1.6E-39 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB3555 40c82c7f748db86a95dc525db6c4c47f 232 SUPERFAMILY SSF53067 29 219 1.68E-41 T 11-11-2016 RB3555 40c82c7f748db86a95dc525db6c4c47f 232 Gene3D G3DSA:3.30.420.40 39 199 1.3E-40 T 11-11-2016 RB3555 40c82c7f748db86a95dc525db6c4c47f 232 ProSitePatterns PS01125 ROK family signature. 36 63 - T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RB3555 40c82c7f748db86a95dc525db6c4c47f 232 Pfam PF00480 ROK family 3 216 6.9E-36 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RB3555 40c82c7f748db86a95dc525db6c4c47f 232 Gene3D G3DSA:3.30.420.40 3 38 3.7E-10 T 11-11-2016 RB8752 c7a3703f9bd0f1ad4c2b4d805300bd87 372 SUPERFAMILY SSF49899 41 243 6.73E-27 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB8752 c7a3703f9bd0f1ad4c2b4d805300bd87 372 Gene3D G3DSA:2.60.120.200 46 243 1.7E-25 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB8752 c7a3703f9bd0f1ad4c2b4d805300bd87 372 Pfam PF07081 Protein of unknown function (DUF1349) 110 242 1.3E-12 T 11-11-2016 IPR009784 Protein of unknown function DUF1349 RB1691 bdbca83cc96797f39e9b061cea47e726 907 Pfam PF04932 O-Antigen ligase 235 378 2.8E-18 T 11-11-2016 IPR007016 O-antigen ligase-related RB1691 bdbca83cc96797f39e9b061cea47e726 907 SUPERFAMILY SSF48452 704 739 8.86E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1691 bdbca83cc96797f39e9b061cea47e726 907 SUPERFAMILY SSF48452 799 880 8.86E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1691 bdbca83cc96797f39e9b061cea47e726 907 Gene3D G3DSA:1.25.40.10 803 875 1.0E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1691 bdbca83cc96797f39e9b061cea47e726 907 Gene3D G3DSA:1.25.40.10 703 738 1.0E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4399 936a93a7bdb4f47dfda7778e0ca2610e 328 SMART SM00829 22 321 5.0E-13 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB4399 936a93a7bdb4f47dfda7778e0ca2610e 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 100 1.4E-5 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB4399 936a93a7bdb4f47dfda7778e0ca2610e 328 SUPERFAMILY SSF50129 13 153 1.16E-32 T 11-11-2016 IPR011032 GroES-like RB4399 936a93a7bdb4f47dfda7778e0ca2610e 328 Gene3D G3DSA:3.40.50.720 163 244 3.3E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4399 936a93a7bdb4f47dfda7778e0ca2610e 328 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 156 177 - T 11-11-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RB4399 936a93a7bdb4f47dfda7778e0ca2610e 328 SUPERFAMILY SSF51735 128 288 2.63E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4399 936a93a7bdb4f47dfda7778e0ca2610e 328 Pfam PF13602 Zinc-binding dehydrogenase 198 321 1.3E-23 T 11-11-2016 RB4399 936a93a7bdb4f47dfda7778e0ca2610e 328 Gene3D G3DSA:3.90.180.10 13 162 7.1E-38 T 11-11-2016 IPR011032 GroES-like RB5861 8a4fe8b8132aeeb669ec057c1a27f268 400 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 19 392 1.3E-140 T 11-11-2016 IPR017741 FAD-dependent oxidoreductase, HpnW RB5861 8a4fe8b8132aeeb669ec057c1a27f268 400 SUPERFAMILY SSF51905 18 232 1.17E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5861 8a4fe8b8132aeeb669ec057c1a27f268 400 SUPERFAMILY SSF51905 369 386 1.17E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5861 8a4fe8b8132aeeb669ec057c1a27f268 400 Gene3D G3DSA:3.30.9.10 96 150 7.6E-6 T 11-11-2016 RB5861 8a4fe8b8132aeeb669ec057c1a27f268 400 Pfam PF01266 FAD dependent oxidoreductase 19 389 1.1E-37 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RB5861 8a4fe8b8132aeeb669ec057c1a27f268 400 Gene3D G3DSA:3.50.50.60 151 231 6.3E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5861 8a4fe8b8132aeeb669ec057c1a27f268 400 Gene3D G3DSA:3.50.50.60 12 94 6.3E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5861 8a4fe8b8132aeeb669ec057c1a27f268 400 Gene3D G3DSA:3.50.50.60 360 388 6.3E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 183 483 2.8E-125 T 11-11-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 165 2.2E-50 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 Gene3D G3DSA:1.10.1040.10 185 450 1.0E-111 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 PIRSF PIRSF000109 1 491 7.6E-224 T 11-11-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 Gene3D G3DSA:3.40.50.720 6 183 3.8E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2817 b47a034fa53116e8ac86fb8439abf79a 492 SUPERFAMILY SSF51735 5 169 7.21E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2817 b47a034fa53116e8ac86fb8439abf79a 492 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 6 484 1.5E-214 T 11-11-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 121 146 1.4E-82 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 255 282 1.4E-82 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 373 395 1.4E-82 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 68 97 1.4E-82 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 172 200 1.4E-82 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 5 28 1.4E-82 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 Gene3D G3DSA:1.20.5.320 452 484 4.3E-21 T 11-11-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 SMART SM01350 183 484 4.6E-206 T 11-11-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RB2817 b47a034fa53116e8ac86fb8439abf79a 492 SUPERFAMILY SSF48179 181 486 1.87E-122 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 PIRSF PIRSF039144 22 133 3.1E-52 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 Pfam PF00543 Nitrogen regulatory protein P-II 25 126 1.5E-41 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 PRINTS PR00340 P-II protein signature 73 96 4.0E-38 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 PRINTS PR00340 P-II protein signature 104 124 4.0E-38 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 PRINTS PR00340 P-II protein signature 44 62 4.0E-38 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 PRINTS PR00340 P-II protein signature 23 38 4.0E-38 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 ProSitePatterns PS00638 P-II protein C-terminal region signature. 104 117 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 SUPERFAMILY SSF54913 23 133 3.18E-43 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 SMART SM00938 25 126 8.6E-64 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB2975 a1e31ae8a41df57d61043c94f475ae0b 133 Gene3D G3DSA:3.30.70.120 23 133 6.2E-48 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RB8823 1dabe9fd6eab895d09c1f7ae2efe7192 331 Pfam PF00756 Putative esterase 77 221 1.4E-14 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 RB8823 1dabe9fd6eab895d09c1f7ae2efe7192 331 Gene3D G3DSA:3.40.50.1820 67 321 1.3E-46 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8823 1dabe9fd6eab895d09c1f7ae2efe7192 331 Gene3D G3DSA:3.40.50.1820 6 30 1.3E-46 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8823 1dabe9fd6eab895d09c1f7ae2efe7192 331 SUPERFAMILY SSF53474 59 321 4.59E-37 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1790 c124eabfc8cedcc8baf54c5dabaa9f88 191 SUPERFAMILY SSF88946 27 109 4.24E-22 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1790 c124eabfc8cedcc8baf54c5dabaa9f88 191 SUPERFAMILY SSF88659 126 182 9.16E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1790 c124eabfc8cedcc8baf54c5dabaa9f88 191 Pfam PF04542 Sigma-70 region 2 33 100 1.1E-17 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1790 c124eabfc8cedcc8baf54c5dabaa9f88 191 Gene3D G3DSA:1.10.1740.10 8 110 1.0E-23 T 11-11-2016 RB1790 c124eabfc8cedcc8baf54c5dabaa9f88 191 Pfam PF08281 Sigma-70, region 4 128 178 1.4E-13 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB1790 c124eabfc8cedcc8baf54c5dabaa9f88 191 Gene3D G3DSA:1.10.10.10 127 184 3.3E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1790 c124eabfc8cedcc8baf54c5dabaa9f88 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 180 1.3E-24 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9535 74ec9ee1b49153076d81ed27c1f5b1ff 484 PIRSF PIRSF006060 25 483 9.2E-68 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RB9535 74ec9ee1b49153076d81ed27c1f5b1ff 484 Pfam PF13520 Amino acid permease 50 464 7.2E-43 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RB2840 65bc2f7f5be7b81285df1eb2bac11935 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 161 5.9E-18 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2840 65bc2f7f5be7b81285df1eb2bac11935 172 Pfam PF04542 Sigma-70 region 2 9 76 1.6E-11 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2840 65bc2f7f5be7b81285df1eb2bac11935 172 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 31 62 - T 11-11-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2840 65bc2f7f5be7b81285df1eb2bac11935 172 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 4 163 5.4E-53 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB2840 65bc2f7f5be7b81285df1eb2bac11935 172 Gene3D G3DSA:1.10.1740.10 3 90 2.3E-19 T 11-11-2016 RB2840 65bc2f7f5be7b81285df1eb2bac11935 172 SUPERFAMILY SSF88946 3 91 5.1E-18 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2840 65bc2f7f5be7b81285df1eb2bac11935 172 Gene3D G3DSA:1.10.10.10 108 164 3.8E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2840 65bc2f7f5be7b81285df1eb2bac11935 172 SUPERFAMILY SSF88659 94 165 2.06E-6 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12236 dbe93fa4eefc0cf51fb306a7575ac2cf 203 Pfam PF03703 Bacterial PH domain 122 197 1.4E-13 T 11-11-2016 IPR005182 Domain of unknown function DUF304 RB3653 4fc9a083cdb7326309343e52096db4ee 275 SUPERFAMILY SSF46689 170 217 5.02E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3653 4fc9a083cdb7326309343e52096db4ee 275 Gene3D G3DSA:1.10.10.60 162 220 1.2E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3653 4fc9a083cdb7326309343e52096db4ee 275 SUPERFAMILY SSF51215 29 151 4.45E-19 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB3653 4fc9a083cdb7326309343e52096db4ee 275 Pfam PF02311 AraC-like ligand binding domain 20 146 5.1E-15 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB3653 4fc9a083cdb7326309343e52096db4ee 275 SUPERFAMILY SSF46689 220 268 3.59E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3653 4fc9a083cdb7326309343e52096db4ee 275 Gene3D G3DSA:1.10.10.60 221 267 1.2E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3653 4fc9a083cdb7326309343e52096db4ee 275 Gene3D G3DSA:2.60.120.280 27 151 4.8E-15 T 11-11-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RB3653 4fc9a083cdb7326309343e52096db4ee 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB3653 4fc9a083cdb7326309343e52096db4ee 275 SMART SM00342 184 266 3.4E-26 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3653 4fc9a083cdb7326309343e52096db4ee 275 Pfam PF12833 Helix-turn-helix domain 190 267 2.2E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3653 4fc9a083cdb7326309343e52096db4ee 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 2.3E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB3653 4fc9a083cdb7326309343e52096db4ee 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 2.3E-5 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB6078 50eb9d92103c9f5bda98a5ec915cb833 206 Gene3D G3DSA:1.10.10.10 121 176 3.3E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6078 50eb9d92103c9f5bda98a5ec915cb833 206 Pfam PF08281 Sigma-70, region 4 121 172 5.7E-17 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6078 50eb9d92103c9f5bda98a5ec915cb833 206 Pfam PF04542 Sigma-70 region 2 35 95 4.6E-12 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6078 50eb9d92103c9f5bda98a5ec915cb833 206 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 29 197 6.2E-74 T 11-11-2016 IPR014304 RNA polymerase sigma-Z type RB6078 50eb9d92103c9f5bda98a5ec915cb833 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 175 2.4E-25 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6078 50eb9d92103c9f5bda98a5ec915cb833 206 SUPERFAMILY SSF88946 8 104 2.16E-17 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6078 50eb9d92103c9f5bda98a5ec915cb833 206 SUPERFAMILY SSF88659 117 176 1.38E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6078 50eb9d92103c9f5bda98a5ec915cb833 206 Gene3D G3DSA:1.10.1740.10 6 113 1.9E-19 T 11-11-2016 RB6148 44138e3db20757b30acf66a8746d8d4c 301 SUPERFAMILY SSF50969 35 258 7.45E-10 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RB6148 44138e3db20757b30acf66a8746d8d4c 301 Gene3D G3DSA:2.130.10.10 85 160 8.9E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB6148 44138e3db20757b30acf66a8746d8d4c 301 Gene3D G3DSA:2.120.10.30 161 259 2.0E-5 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB12762 0508e89c8329446da7f6e399726675b6 1040 SUPERFAMILY SSF51998 212 643 2.38E-129 T 11-11-2016 RB12762 0508e89c8329446da7f6e399726675b6 1040 SUPERFAMILY SSF51998 677 755 2.38E-129 T 11-11-2016 RB12762 0508e89c8329446da7f6e399726675b6 1040 Gene3D G3DSA:3.20.70.20 83 536 2.6E-97 T 11-11-2016 RB12762 0508e89c8329446da7f6e399726675b6 1040 Gene3D G3DSA:3.20.70.20 710 757 2.6E-97 T 11-11-2016 RB12762 0508e89c8329446da7f6e399726675b6 1040 Gene3D G3DSA:3.20.70.20 593 639 2.6E-97 T 11-11-2016 RB12762 0508e89c8329446da7f6e399726675b6 1040 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 80 163 2.5E-20 T 11-11-2016 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB12762 0508e89c8329446da7f6e399726675b6 1040 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 122 761 3.5E-189 T 11-11-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RB12762 0508e89c8329446da7f6e399726675b6 1040 Pfam PF02867 Ribonucleotide reductase, barrel domain 212 751 1.6E-133 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RB12762 0508e89c8329446da7f6e399726675b6 1040 PRINTS PR01183 Ribonucleotide reductase large chain signature 593 620 2.1E-14 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RB12762 0508e89c8329446da7f6e399726675b6 1040 PRINTS PR01183 Ribonucleotide reductase large chain signature 287 306 2.1E-14 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RB12762 0508e89c8329446da7f6e399726675b6 1040 PRINTS PR01183 Ribonucleotide reductase large chain signature 488 510 2.1E-14 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RB12762 0508e89c8329446da7f6e399726675b6 1040 PRINTS PR01183 Ribonucleotide reductase large chain signature 416 427 2.1E-14 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RB5743 3918787e74fe193967bf594c89265e65 431 SUPERFAMILY SSF51905 6 202 6.31E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5743 3918787e74fe193967bf594c89265e65 431 SUPERFAMILY SSF51905 368 425 6.31E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5743 3918787e74fe193967bf594c89265e65 431 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 422 2.5E-121 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RB5743 3918787e74fe193967bf594c89265e65 431 Gene3D G3DSA:2.40.30.10 202 295 1.1E-16 T 11-11-2016 RB5743 3918787e74fe193967bf594c89265e65 431 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 178 6.6E-6 T 11-11-2016 RB5743 3918787e74fe193967bf594c89265e65 431 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 6.6E-6 T 11-11-2016 RB5743 3918787e74fe193967bf594c89265e65 431 Pfam PF03486 HI0933-like protein 9 423 3.6E-122 T 11-11-2016 RB5743 3918787e74fe193967bf594c89265e65 431 Gene3D G3DSA:1.10.8.260 296 347 1.8E-4 T 11-11-2016 IPR023166 HI0933 insert-like domain RB5743 3918787e74fe193967bf594c89265e65 431 SUPERFAMILY SSF160996 203 371 7.19E-35 T 11-11-2016 RB5743 3918787e74fe193967bf594c89265e65 431 Gene3D G3DSA:3.50.50.60 370 425 8.6E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5743 3918787e74fe193967bf594c89265e65 431 Gene3D G3DSA:3.50.50.60 6 200 8.6E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB2547 3e700026bbae800bb41475792a1f5db0 448 Gene3D G3DSA:3.40.190.10 211 343 1.6E-9 T 11-11-2016 RB2547 3e700026bbae800bb41475792a1f5db0 448 Pfam PF13416 Bacterial extracellular solute-binding protein 86 356 6.8E-14 T 11-11-2016 RB2547 3e700026bbae800bb41475792a1f5db0 448 Gene3D G3DSA:3.40.190.10 63 165 1.1E-15 T 11-11-2016 RB2547 3e700026bbae800bb41475792a1f5db0 448 Gene3D G3DSA:3.40.190.10 344 388 1.1E-15 T 11-11-2016 RB2547 3e700026bbae800bb41475792a1f5db0 448 SUPERFAMILY SSF53850 62 448 4.29E-47 T 11-11-2016 RB3453 005d27a6c0d20f51ddae2902187dfe09 793 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 561 776 6.1E-37 T 11-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 RB3453 005d27a6c0d20f51ddae2902187dfe09 793 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 12 107 1.6E-10 T 11-11-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 RB9315 26b93a9a441ccee045b1404ae5f4d797 736 Pfam PF13437 HlyD family secretion protein 617 695 1.4E-10 T 11-11-2016 RB1802 5eeb8e47716bc81a4563f1812d86107d 847 SUPERFAMILY SSF52317 359 610 8.01E-22 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB1802 5eeb8e47716bc81a4563f1812d86107d 847 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 58 5.7E-9 T 11-11-2016 IPR011933 Double transmembrane domain RB1802 5eeb8e47716bc81a4563f1812d86107d 847 Gene3D G3DSA:3.40.50.880 352 610 2.1E-9 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8754 10e5865ae88f03a647d2f99b285f0ce7 991 Pfam PF13584 Oxygen tolerance 36 532 3.6E-61 T 11-11-2016 IPR025738 Aerotolerance-related protein BatD RB8754 10e5865ae88f03a647d2f99b285f0ce7 991 SMART SM00028 763 796 7.7E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB8754 10e5865ae88f03a647d2f99b285f0ce7 991 Gene3D G3DSA:1.25.40.10 740 824 4.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8754 10e5865ae88f03a647d2f99b285f0ce7 991 SUPERFAMILY SSF48452 703 826 9.25E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8754 10e5865ae88f03a647d2f99b285f0ce7 991 Pfam PF07719 Tetratricopeptide repeat 764 796 1.4E-5 T 11-11-2016 IPR013105 Tetratricopeptide repeat 2 RB1578 8de3c04249e4b082a791185b2423c3ac 601 SUPERFAMILY SSF50715 380 590 2.77E-73 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB1578 8de3c04249e4b082a791185b2423c3ac 601 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 70 377 1.2E-106 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 RB1578 8de3c04249e4b082a791185b2423c3ac 601 Gene3D G3DSA:2.40.240.10 503 590 3.7E-30 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB1578 8de3c04249e4b082a791185b2423c3ac 601 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 70 594 2.1E-225 T 11-11-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RB1578 8de3c04249e4b082a791185b2423c3ac 601 SUPERFAMILY SSF52374 70 386 5.07E-100 T 11-11-2016 RB1578 8de3c04249e4b082a791185b2423c3ac 601 Gene3D G3DSA:2.40.240.10 388 502 2.7E-47 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB1578 8de3c04249e4b082a791185b2423c3ac 601 Gene3D G3DSA:1.10.1160.10 303 378 1.5E-35 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RB1578 8de3c04249e4b082a791185b2423c3ac 601 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 41 592 53.022 T 11-11-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 RB1578 8de3c04249e4b082a791185b2423c3ac 601 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 380 572 6.3E-59 T 11-11-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB1578 8de3c04249e4b082a791185b2423c3ac 601 Gene3D G3DSA:3.40.50.620 253 302 4.4E-41 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB1578 8de3c04249e4b082a791185b2423c3ac 601 Gene3D G3DSA:3.40.50.620 70 138 4.4E-41 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB1578 8de3c04249e4b082a791185b2423c3ac 601 Gene3D G3DSA:3.90.800.10 142 250 4.8E-48 T 11-11-2016 RB1578 8de3c04249e4b082a791185b2423c3ac 601 PRINTS PR00987 Glutamyl-tRNA synthetase signature 73 85 9.8E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB1578 8de3c04249e4b082a791185b2423c3ac 601 PRINTS PR00987 Glutamyl-tRNA synthetase signature 87 98 9.8E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB1578 8de3c04249e4b082a791185b2423c3ac 601 PRINTS PR00987 Glutamyl-tRNA synthetase signature 102 115 9.8E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB1578 8de3c04249e4b082a791185b2423c3ac 601 PRINTS PR00987 Glutamyl-tRNA synthetase signature 251 261 9.8E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RB1578 8de3c04249e4b082a791185b2423c3ac 601 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 76 87 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB4505 981afbfd8450e1ffc82d2d92bd82c8ee 383 SUPERFAMILY SSF56219 110 338 7.46E-30 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB4505 981afbfd8450e1ffc82d2d92bd82c8ee 383 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 121 325 9.8E-24 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB4505 981afbfd8450e1ffc82d2d92bd82c8ee 383 Gene3D G3DSA:3.60.10.10 116 261 3.5E-5 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB7857 eb67feb73155cf118c8873ec3bb0a0f5 149 Gene3D G3DSA:3.30.420.100 52 149 7.4E-35 T 11-11-2016 RB7857 eb67feb73155cf118c8873ec3bb0a0f5 149 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 35 149 9.7E-34 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7857 eb67feb73155cf118c8873ec3bb0a0f5 149 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 35 149 1.0E-38 T 11-11-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7857 eb67feb73155cf118c8873ec3bb0a0f5 149 SUPERFAMILY SSF53137 36 147 5.67E-45 T 11-11-2016 RB7857 eb67feb73155cf118c8873ec3bb0a0f5 149 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 33 149 26.292 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9890 4e97ba5908919b5772e16cc386b00b12 390 TIGRFAM TIGR03169 Nterm_to_SelD: pyridine nucleotide-disulfide oxidoreductase family protein 22 387 1.1E-99 T 11-11-2016 IPR017584 Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal RB9890 4e97ba5908919b5772e16cc386b00b12 390 SUPERFAMILY SSF51905 21 190 6.41E-12 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9890 4e97ba5908919b5772e16cc386b00b12 390 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 88 312 4.9E-20 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9890 4e97ba5908919b5772e16cc386b00b12 390 Gene3D G3DSA:3.50.50.60 19 128 2.3E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9890 4e97ba5908919b5772e16cc386b00b12 390 SUPERFAMILY SSF51905 163 334 5.02E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9890 4e97ba5908919b5772e16cc386b00b12 390 Gene3D G3DSA:3.50.50.60 129 329 1.1E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9659 182f596b6e6ad9209556512247a66693 298 PIRSF PIRSF006157 40 298 2.8E-80 T 11-11-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RB9659 182f596b6e6ad9209556512247a66693 298 SUPERFAMILY SSF53213 45 297 6.28E-82 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RB9659 182f596b6e6ad9209556512247a66693 298 Gene3D G3DSA:3.40.830.10 39 298 2.1E-82 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RB9659 182f596b6e6ad9209556512247a66693 298 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 49 296 2.3E-24 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RB10569 21ab499308b763c3714b404cd9c11337 388 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 9.3E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB10569 21ab499308b763c3714b404cd9c11337 388 SUPERFAMILY SSF54523 13 148 1.33E-20 T 11-11-2016 RB10569 21ab499308b763c3714b404cd9c11337 388 Pfam PF07596 Protein of unknown function (DUF1559) 42 324 2.3E-56 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB10569 21ab499308b763c3714b404cd9c11337 388 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 8 31 1.4E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3915 2e980d4513b3657157c7728f31c2afd0 496 SUPERFAMILY SSF52141 301 481 1.44E-54 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB3915 2e980d4513b3657157c7728f31c2afd0 496 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 261 487 8.5E-91 T 11-11-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RB3915 2e980d4513b3657157c7728f31c2afd0 496 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 12 259 2.7E-65 T 11-11-2016 IPR023875 DNA metabolism protein, putative RB3915 2e980d4513b3657157c7728f31c2afd0 496 SMART SM00987 326 486 1.2E-39 T 11-11-2016 RB3915 2e980d4513b3657157c7728f31c2afd0 496 Pfam PF13566 Domain of unknown function (DUF4130 100 258 2.6E-40 T 11-11-2016 IPR025404 Domain of unknown function DUF4130 RB3915 2e980d4513b3657157c7728f31c2afd0 496 Gene3D G3DSA:3.40.470.10 301 492 1.1E-60 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB3915 2e980d4513b3657157c7728f31c2afd0 496 Pfam PF03167 Uracil DNA glycosylase superfamily 326 485 9.3E-39 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB3915 2e980d4513b3657157c7728f31c2afd0 496 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 312 473 3.9E-42 T 11-11-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RB3915 2e980d4513b3657157c7728f31c2afd0 496 SMART SM00986 326 486 1.2E-39 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB10388 0592adeffce0d93ef9124393b11e33e9 693 Gene3D G3DSA:3.30.200.20 23 158 9.1E-24 T 11-11-2016 RB10388 0592adeffce0d93ef9124393b11e33e9 693 SMART SM00220 44 301 3.6E-57 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10388 0592adeffce0d93ef9124393b11e33e9 693 Gene3D G3DSA:1.10.510.10 159 301 1.7E-46 T 11-11-2016 RB10388 0592adeffce0d93ef9124393b11e33e9 693 Pfam PF00069 Protein kinase domain 44 290 4.3E-47 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10388 0592adeffce0d93ef9124393b11e33e9 693 SUPERFAMILY SSF56112 40 302 8.23E-69 T 11-11-2016 IPR011009 Protein kinase-like domain RB10388 0592adeffce0d93ef9124393b11e33e9 693 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 50 72 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB5776 a62f43d1a2f8edf2d5340961531bee8a 318 Gene3D G3DSA:3.40.50.720 2 134 1.2E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5776 a62f43d1a2f8edf2d5340961531bee8a 318 SUPERFAMILY SSF51735 3 151 9.01E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5776 a62f43d1a2f8edf2d5340961531bee8a 318 Gene3D G3DSA:3.30.360.10 135 317 1.9E-38 T 11-11-2016 RB5776 a62f43d1a2f8edf2d5340961531bee8a 318 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 199 4.0E-9 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RB5776 a62f43d1a2f8edf2d5340961531bee8a 318 SUPERFAMILY SSF55347 129 287 2.45E-30 T 11-11-2016 RB5776 a62f43d1a2f8edf2d5340961531bee8a 318 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 123 2.7E-25 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 SUPERFAMILY SSF52317 196 381 1.36E-57 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB5179 e41cc626fee62666b5c9c5127635d4fb 389 Pfam PF00117 Glutamine amidotransferase class-I 205 377 1.4E-44 T 11-11-2016 IPR017926 Glutamine amidotransferase RB5179 e41cc626fee62666b5c9c5127635d4fb 389 SUPERFAMILY SSF52021 9 152 8.5E-55 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 9 136 4.0E-50 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 9 381 7.1E-144 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 SMART SM01097 7 137 2.4E-83 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 356 369 1.5E-12 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 244 253 1.5E-12 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00096 Glutamine amidotransferase superfamily signature 271 282 1.5E-12 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 Gene3D G3DSA:3.40.50.880 158 381 3.2E-72 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 271 287 4.5E-38 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 288 305 4.5E-38 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 313 324 4.5E-38 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 255 4.5E-38 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 202 216 4.5E-38 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 7 385 48.048 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 Gene3D G3DSA:3.50.30.20 8 150 1.3E-57 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00097 Anthranilate synthase component II signature 244 253 1.7E-7 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00097 Anthranilate synthase component II signature 271 282 1.7E-7 T 11-11-2016 RB5179 e41cc626fee62666b5c9c5127635d4fb 389 PRINTS PR00097 Anthranilate synthase component II signature 356 369 1.7E-7 T 11-11-2016 RB200 627e70c92cd7e206774eb09927f7c17e 539 SUPERFAMILY SSF53649 27 498 4.8E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB200 627e70c92cd7e206774eb09927f7c17e 539 Gene3D G3DSA:3.30.1120.10 419 505 1.1E-15 T 11-11-2016 RB200 627e70c92cd7e206774eb09927f7c17e 539 Pfam PF00884 Sulfatase 29 385 1.4E-62 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB200 627e70c92cd7e206774eb09927f7c17e 539 Pfam PF16347 Domain of unknown function (DUF4976) 388 497 4.2E-24 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB200 627e70c92cd7e206774eb09927f7c17e 539 Gene3D G3DSA:3.40.720.10 26 404 1.3E-108 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB200 627e70c92cd7e206774eb09927f7c17e 539 ProSitePatterns PS00523 Sulfatases signature 1. 78 90 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB200 627e70c92cd7e206774eb09927f7c17e 539 ProSitePatterns PS00149 Sulfatases signature 2. 120 130 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB8750 03e31f08023c498fc9b25ee7f6c10386 365 SUPERFAMILY SSF49899 35 236 1.46E-28 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB8750 03e31f08023c498fc9b25ee7f6c10386 365 Pfam PF07081 Protein of unknown function (DUF1349) 103 235 8.8E-14 T 11-11-2016 IPR009784 Protein of unknown function DUF1349 RB8750 03e31f08023c498fc9b25ee7f6c10386 365 Gene3D G3DSA:2.60.120.200 40 236 1.4E-24 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB11146 0cc7602b100b8dafb129661e05335c02 291 Pfam PF01738 Dienelactone hydrolase family 66 289 2.3E-37 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 RB11146 0cc7602b100b8dafb129661e05335c02 291 SUPERFAMILY SSF53474 53 288 3.31E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11146 0cc7602b100b8dafb129661e05335c02 291 Gene3D G3DSA:3.40.50.1820 51 287 3.9E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10370 28f39700054378abdc28da9ad0b69f3e 226 SUPERFAMILY SSF56784 10 213 9.84E-45 T 11-11-2016 IPR023214 HAD-like domain RB10370 28f39700054378abdc28da9ad0b69f3e 226 Gene3D G3DSA:3.40.50.1000 95 218 6.8E-39 T 11-11-2016 IPR023214 HAD-like domain RB10370 28f39700054378abdc28da9ad0b69f3e 226 Gene3D G3DSA:3.40.50.1000 6 23 6.8E-39 T 11-11-2016 IPR023214 HAD-like domain RB10370 28f39700054378abdc28da9ad0b69f3e 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 191 2.9E-23 T 11-11-2016 IPR023214 HAD-like domain RB10370 28f39700054378abdc28da9ad0b69f3e 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 191 5.7E-15 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB10370 28f39700054378abdc28da9ad0b69f3e 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 2.0E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB10370 28f39700054378abdc28da9ad0b69f3e 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 2.0E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB10370 28f39700054378abdc28da9ad0b69f3e 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 2.0E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB10370 28f39700054378abdc28da9ad0b69f3e 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 2.0E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB5442 d2848b0dc578dc1bd40d0f481a3ab609 384 Gene3D G3DSA:3.40.50.410 219 376 1.9E-5 T 11-11-2016 IPR002035 von Willebrand factor, type A RB5442 d2848b0dc578dc1bd40d0f481a3ab609 384 SUPERFAMILY SSF53300 218 377 9.93E-15 T 11-11-2016 IPR002035 von Willebrand factor, type A RB5442 d2848b0dc578dc1bd40d0f481a3ab609 384 Pfam PF13768 von Willebrand factor type A domain 219 376 2.2E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8542 6211820d2d1dd09fc1c767d5728910af 345 Hamap MF_00235 Adenylate kinase [adk]. 131 318 31.877 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB8542 6211820d2d1dd09fc1c767d5728910af 345 Pfam PF00406 Adenylate kinase 135 295 1.7E-36 T 11-11-2016 RB8542 6211820d2d1dd09fc1c767d5728910af 345 SUPERFAMILY SSF52540 128 320 2.75E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8542 6211820d2d1dd09fc1c767d5728910af 345 PRINTS PR00094 Adenylate kinase signature 214 230 1.8E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB8542 6211820d2d1dd09fc1c767d5728910af 345 PRINTS PR00094 Adenylate kinase signature 162 176 1.8E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB8542 6211820d2d1dd09fc1c767d5728910af 345 PRINTS PR00094 Adenylate kinase signature 282 296 1.8E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB8542 6211820d2d1dd09fc1c767d5728910af 345 PRINTS PR00094 Adenylate kinase signature 265 280 1.8E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB8542 6211820d2d1dd09fc1c767d5728910af 345 PRINTS PR00094 Adenylate kinase signature 134 147 1.8E-21 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB8542 6211820d2d1dd09fc1c767d5728910af 345 ProSitePatterns PS00113 Adenylate kinase signature. 214 225 - T 11-11-2016 RB8542 6211820d2d1dd09fc1c767d5728910af 345 Gene3D G3DSA:3.40.50.300 128 320 6.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5313 84f11ec623e8eab087f015500038a662 688 SUPERFAMILY SSF48208 116 426 6.38E-24 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB5313 84f11ec623e8eab087f015500038a662 688 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 58 597 9.8E-188 T 11-11-2016 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 RB5313 84f11ec623e8eab087f015500038a662 688 Gene3D G3DSA:1.50.10.10 182 324 1.7E-11 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RB10299 186f61f6d7dd3556fd0f9ed8582df4d0 455 SUPERFAMILY SSF56059 181 320 2.08E-10 T 11-11-2016 RB10299 186f61f6d7dd3556fd0f9ed8582df4d0 455 Gene3D G3DSA:3.30.470.20 270 320 2.0E-7 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB10299 186f61f6d7dd3556fd0f9ed8582df4d0 455 Pfam PF02655 ATP-grasp domain 185 321 2.0E-6 T 11-11-2016 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 RB3678 891016dcbaf4f67b7081713b0052472b 207 Pfam PF02424 ApbE family 38 180 3.5E-36 T 11-11-2016 IPR024932 Flavin transferase ApbE GO:0017013 RB3678 891016dcbaf4f67b7081713b0052472b 207 SUPERFAMILY SSF143631 27 180 3.92E-41 T 11-11-2016 IPR003374 ApbE-like domain RB1699 b53f22951914e6234722cbe6c7c27fc1 334 Pfam PF07610 Protein of unknown function (DUF1573) 57 99 3.2E-11 T 11-11-2016 IPR011467 Protein of unknown function DUF1573 RB1699 b53f22951914e6234722cbe6c7c27fc1 334 Gene3D G3DSA:2.60.40.360 37 131 1.7E-13 T 11-11-2016 IPR008962 PapD-like RB1699 b53f22951914e6234722cbe6c7c27fc1 334 Gene3D G3DSA:2.60.40.360 136 234 4.0E-11 T 11-11-2016 IPR008962 PapD-like RB6866 7387f81d7e1f2671272f2651c9b9cece 516 Pfam PF03983 SLA1 homology domain 1, SHD1 452 510 2.9E-8 T 11-11-2016 IPR007131 SLA1 homology domain 1, SHD1 GO:0008092|GO:0030674|GO:0042802|GO:0043130 RB4598 4bcfd86758d60f6db126ae1d4002f1af 306 Pfam PF14559 Tetratricopeptide repeat 137 189 6.0E-6 T 11-11-2016 RB4598 4bcfd86758d60f6db126ae1d4002f1af 306 SUPERFAMILY SSF48452 127 184 1.46E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4598 4bcfd86758d60f6db126ae1d4002f1af 306 Gene3D G3DSA:1.25.40.10 127 186 7.0E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10308 a039367a62256a09f73886887ed9492d 308 SMART SM00448 6 120 6.8E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10308 a039367a62256a09f73886887ed9492d 308 Pfam PF00990 Diguanylate cyclase, GGDEF domain 138 292 9.5E-38 T 11-11-2016 IPR000160 GGDEF domain RB10308 a039367a62256a09f73886887ed9492d 308 SUPERFAMILY SSF55073 143 294 5.02E-40 T 11-11-2016 IPR029787 Nucleotide cyclase RB10308 a039367a62256a09f73886887ed9492d 308 Gene3D G3DSA:3.40.50.2300 5 132 3.4E-27 T 11-11-2016 RB10308 a039367a62256a09f73886887ed9492d 308 SMART SM00267 127 296 4.3E-46 T 11-11-2016 IPR000160 GGDEF domain RB10308 a039367a62256a09f73886887ed9492d 308 Pfam PF00072 Response regulator receiver domain 9 120 1.1E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10308 a039367a62256a09f73886887ed9492d 308 SUPERFAMILY SSF52172 4 132 3.56E-26 T 11-11-2016 IPR011006 CheY-like superfamily RB10308 a039367a62256a09f73886887ed9492d 308 Gene3D G3DSA:3.30.70.270 140 295 8.1E-45 T 11-11-2016 RB10308 a039367a62256a09f73886887ed9492d 308 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 134 295 6.7E-40 T 11-11-2016 IPR000160 GGDEF domain RB12441 5bfe9e56c76ccb005dc69de4b4d949ba 259 SUPERFAMILY SSF55811 90 254 4.6E-38 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB12441 5bfe9e56c76ccb005dc69de4b4d949ba 259 Pfam PF00293 NUDIX domain 121 233 1.8E-23 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RB12441 5bfe9e56c76ccb005dc69de4b4d949ba 259 Gene3D G3DSA:3.90.79.10 108 256 1.1E-33 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB12441 5bfe9e56c76ccb005dc69de4b4d949ba 259 PRINTS PR00502 NUDIX hydrolase family signature 149 163 1.3E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RB12441 5bfe9e56c76ccb005dc69de4b4d949ba 259 PRINTS PR00502 NUDIX hydrolase family signature 163 178 1.3E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RB8999 3b232817bbcaf1694a01a530ed8ffb47 773 Gene3D G3DSA:3.40.50.410 702 729 4.7E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8999 3b232817bbcaf1694a01a530ed8ffb47 773 Gene3D G3DSA:3.40.50.410 202 238 4.7E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8999 3b232817bbcaf1694a01a530ed8ffb47 773 Gene3D G3DSA:3.40.50.880 323 589 2.6E-59 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8999 3b232817bbcaf1694a01a530ed8ffb47 773 SUPERFAMILY SSF53300 94 239 5.65E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8999 3b232817bbcaf1694a01a530ed8ffb47 773 SUPERFAMILY SSF52317 327 588 6.87E-41 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8999 3b232817bbcaf1694a01a530ed8ffb47 773 Gene3D G3DSA:2.60.40.10 610 677 1.3E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB2764 d08f38404746d6b3348680c9277694b7 841 Pfam PF07627 Protein of unknown function (DUF1588) 631 730 3.7E-32 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB2764 d08f38404746d6b3348680c9277694b7 841 Pfam PF07637 Protein of unknown function (DUF1595) 403 463 6.7E-20 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB2764 d08f38404746d6b3348680c9277694b7 841 Pfam PF07626 Protein of unknown function (DUF1587) 149 213 3.1E-22 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB2764 d08f38404746d6b3348680c9277694b7 841 Pfam PF07624 Protein of unknown function (DUF1585) 764 837 2.0E-22 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB2764 d08f38404746d6b3348680c9277694b7 841 Pfam PF07631 Protein of unknown function (DUF1592) 474 603 1.4E-38 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB6063 91e45ba2d900e839ffb6e314a3ce385e 365 Gene3D G3DSA:3.30.460.20 12 168 1.1E-35 T 11-11-2016 RB6063 91e45ba2d900e839ffb6e314a3ce385e 365 Gene3D G3DSA:1.20.58.340 169 278 2.9E-26 T 11-11-2016 RB6063 91e45ba2d900e839ffb6e314a3ce385e 365 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 40 364 6.1E-86 T 11-11-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 RB6063 91e45ba2d900e839ffb6e314a3ce385e 365 SUPERFAMILY SSF143865 30 290 5.36E-62 T 11-11-2016 RB6063 91e45ba2d900e839ffb6e314a3ce385e 365 Gene3D G3DSA:1.20.58.340 282 364 2.1E-27 T 11-11-2016 RB6063 91e45ba2d900e839ffb6e314a3ce385e 365 Pfam PF01544 CorA-like Mg2+ transporter protein 69 359 3.0E-61 T 11-11-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RB6063 91e45ba2d900e839ffb6e314a3ce385e 365 SUPERFAMILY SSF144083 294 362 6.54E-19 T 11-11-2016 RB6844 926dde90eea8001d43a61221616c155e 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 11-11-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 RB6844 926dde90eea8001d43a61221616c155e 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 120 7.4E-46 T 11-11-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RB6844 926dde90eea8001d43a61221616c155e 316 Gene3D G3DSA:3.40.50.2020 160 283 1.2E-40 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB6844 926dde90eea8001d43a61221616c155e 316 SUPERFAMILY SSF53271 69 305 1.19E-57 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB6844 926dde90eea8001d43a61221616c155e 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 314 3.0E-23 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RB6844 926dde90eea8001d43a61221616c155e 316 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 44.69 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RB6844 926dde90eea8001d43a61221616c155e 316 Gene3D G3DSA:3.40.50.2020 1 159 4.1E-73 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB6844 926dde90eea8001d43a61221616c155e 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 5.7E-114 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RB6844 926dde90eea8001d43a61221616c155e 316 SMART SM01400 4 120 3.5E-75 T 11-11-2016 RB6831 b258bf8c3dfc17369bd84bca5522f7bc 439 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 17 438 8.1E-186 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RB6831 b258bf8c3dfc17369bd84bca5522f7bc 439 Pfam PF00202 Aminotransferase class-III 46 427 2.7E-79 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RB6831 b258bf8c3dfc17369bd84bca5522f7bc 439 SUPERFAMILY SSF53383 15 438 2.62E-129 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB6831 b258bf8c3dfc17369bd84bca5522f7bc 439 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 284 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RB6831 b258bf8c3dfc17369bd84bca5522f7bc 439 Gene3D G3DSA:3.40.640.10 84 330 1.3E-82 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB6831 b258bf8c3dfc17369bd84bca5522f7bc 439 Gene3D G3DSA:3.90.1150.10 333 438 2.9E-39 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB6831 b258bf8c3dfc17369bd84bca5522f7bc 439 Gene3D G3DSA:3.90.1150.10 16 83 2.9E-39 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB6831 b258bf8c3dfc17369bd84bca5522f7bc 439 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 17 439 102.592 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RB3245 8c257358e0edd6d551d4b7c9a3395878 335 Pfam PF13672 Protein phosphatase 2C 50 244 2.9E-16 T 11-11-2016 RB3245 8c257358e0edd6d551d4b7c9a3395878 335 Gene3D G3DSA:3.60.40.10 6 275 1.2E-63 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB3245 8c257358e0edd6d551d4b7c9a3395878 335 SMART SM00332 4 276 1.8E-30 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB3245 8c257358e0edd6d551d4b7c9a3395878 335 SUPERFAMILY SSF81606 7 28 7.32E-57 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB3245 8c257358e0edd6d551d4b7c9a3395878 335 SUPERFAMILY SSF81606 55 275 7.32E-57 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB3245 8c257358e0edd6d551d4b7c9a3395878 335 SMART SM00331 46 278 2.2E-24 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RB8701 c0cf98868d249f202def844c1339b296 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 187 1.4E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8701 c0cf98868d249f202def844c1339b296 200 Gene3D G3DSA:1.10.10.10 125 189 7.6E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8701 c0cf98868d249f202def844c1339b296 200 Pfam PF04542 Sigma-70 region 2 46 104 2.3E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8701 c0cf98868d249f202def844c1339b296 200 Gene3D G3DSA:1.10.1740.10 34 107 4.0E-12 T 11-11-2016 RB8701 c0cf98868d249f202def844c1339b296 200 SUPERFAMILY SSF88946 34 115 1.41E-11 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8701 c0cf98868d249f202def844c1339b296 200 SUPERFAMILY SSF88659 123 188 2.43E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8701 c0cf98868d249f202def844c1339b296 200 Pfam PF08281 Sigma-70, region 4 133 184 2.1E-10 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB5813 c14e9485ad53107e514b615020f37ccd 471 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 29 131 1.5E-15 T 11-11-2016 IPR032093 Phospholipase D, N-terminal RB5813 c14e9485ad53107e514b615020f37ccd 471 Gene3D G3DSA:3.60.21.10 139 468 1.0E-21 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5813 c14e9485ad53107e514b615020f37ccd 471 SUPERFAMILY SSF56300 179 467 1.28E-24 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5813 c14e9485ad53107e514b615020f37ccd 471 Pfam PF09423 PhoD-like phosphatase 143 411 1.2E-23 T 11-11-2016 IPR018946 Alkaline phosphatase D-related RB13154 362b5b9dfcd338a1400ffd38312e8cf1 297 Gene3D G3DSA:3.40.50.1820 39 262 3.9E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB13154 362b5b9dfcd338a1400ffd38312e8cf1 297 Pfam PF07859 alpha/beta hydrolase fold 65 184 8.1E-14 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB13154 362b5b9dfcd338a1400ffd38312e8cf1 297 SUPERFAMILY SSF53474 36 263 7.75E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4041 6f7c1acae30366b2789a13c9c491d9df 328 Gene3D G3DSA:3.20.20.150 22 118 1.3E-30 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB4041 6f7c1acae30366b2789a13c9c491d9df 328 Gene3D G3DSA:3.20.20.150 161 328 1.3E-30 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB4041 6f7c1acae30366b2789a13c9c491d9df 328 SUPERFAMILY SSF51658 22 114 8.89E-27 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB4041 6f7c1acae30366b2789a13c9c491d9df 328 SUPERFAMILY SSF51658 183 328 8.89E-27 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB4041 6f7c1acae30366b2789a13c9c491d9df 328 Pfam PF01261 Xylose isomerase-like TIM barrel 27 283 4.3E-73 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 SUPERFAMILY SSF47384 40 112 8.83E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 SUPERFAMILY SSF55874 107 273 4.58E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 PRINTS PR00344 Bacterial sensor protein C-terminal signature 257 270 3.2E-20 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 PRINTS PR00344 Bacterial sensor protein C-terminal signature 197 211 3.2E-20 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 PRINTS PR00344 Bacterial sensor protein C-terminal signature 215 225 3.2E-20 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 PRINTS PR00344 Bacterial sensor protein C-terminal signature 233 251 3.2E-20 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 Gene3D G3DSA:3.30.565.10 117 271 5.5E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 158 270 3.6E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 SMART SM00388 48 113 1.6E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7488 56c78b6b2f1ea845ad5af218a6c86b32 279 SMART SM00387 154 273 1.2E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8674 6339ba54fe9e9819b273bd7a9a268640 658 Gene3D G3DSA:3.40.30.10 526 658 8.3E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8674 6339ba54fe9e9819b273bd7a9a268640 658 ProSitePatterns PS00194 Thioredoxin family active site. 549 567 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RB8674 6339ba54fe9e9819b273bd7a9a268640 658 Pfam PF00578 AhpC/TSA family 527 640 1.3E-18 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB8674 6339ba54fe9e9819b273bd7a9a268640 658 SUPERFAMILY SSF52833 527 657 1.15E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12666 f67806de0740d19242fb9f95f029dca1 1205 Gene3D G3DSA:2.40.40.20 692 774 2.7E-10 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 Gene3D G3DSA:3.40.50.740 468 609 7.3E-9 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 Gene3D G3DSA:3.40.50.740 268 302 7.3E-9 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 Pfam PF12838 4Fe-4S dicluster domain 985 1091 2.9E-11 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB12666 f67806de0740d19242fb9f95f029dca1 1205 SUPERFAMILY SSF53706 443 610 6.02E-21 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 SUPERFAMILY SSF53706 189 409 6.02E-21 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 TIGRFAM TIGR04519 MoCo_extend_TAT: MoCo/4Fe-4S cofactor protein extended Tat translocation domain 94 136 4.5E-12 T 11-11-2016 IPR030948 MoCo/4Fe-4S cofactor protein extended Tat translocation domain RB12666 f67806de0740d19242fb9f95f029dca1 1205 Gene3D G3DSA:3.30.70.20 889 957 9.3E-40 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 Gene3D G3DSA:3.30.70.20 1046 1128 9.3E-40 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 Gene3D G3DSA:3.30.70.20 995 1020 7.0E-4 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 Gene3D G3DSA:3.30.70.20 958 994 2.5E-15 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 SUPERFAMILY SSF54862 888 1005 9.52E-51 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 SUPERFAMILY SSF54862 1045 1140 9.52E-51 T 11-11-2016 RB12666 f67806de0740d19242fb9f95f029dca1 1205 Pfam PF01568 Molydopterin dinucleotide binding domain 717 775 8.9E-6 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RB12666 f67806de0740d19242fb9f95f029dca1 1205 SUPERFAMILY SSF50692 693 772 4.29E-10 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain RB7833 a9b6a6824e1451d5651f476614f44a6d 228 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 225 36.968 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7833 a9b6a6824e1451d5651f476614f44a6d 228 SUPERFAMILY SSF50447 3 226 7.51E-72 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB7833 a9b6a6824e1451d5651f476614f44a6d 228 Pfam PF00297 Ribosomal protein L3 116 200 6.7E-11 T 11-11-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7833 a9b6a6824e1451d5651f476614f44a6d 228 Gene3D G3DSA:2.40.30.10 4 33 2.7E-12 T 11-11-2016 RB7833 a9b6a6824e1451d5651f476614f44a6d 228 Gene3D G3DSA:2.40.30.10 176 225 2.7E-12 T 11-11-2016 RB7833 a9b6a6824e1451d5651f476614f44a6d 228 Gene3D G3DSA:4.10.960.10 103 175 6.3E-26 T 11-11-2016 RB7833 a9b6a6824e1451d5651f476614f44a6d 228 ProSitePatterns PS00474 Ribosomal protein L3 signature. 119 142 - T 11-11-2016 IPR019926 Ribosomal protein L3, conserved site RB7833 a9b6a6824e1451d5651f476614f44a6d 228 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 5 222 9.6E-77 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7851 5b3103e6e8306805137359e1c111b093 115 Gene3D G3DSA:2.30.30.30 1 90 1.9E-25 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 RB7851 5b3103e6e8306805137359e1c111b093 115 SMART SM00739 2 29 6.5E-7 T 11-11-2016 IPR005824 KOW RB7851 5b3103e6e8306805137359e1c111b093 115 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 11-11-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7851 5b3103e6e8306805137359e1c111b093 115 SUPERFAMILY SSF50104 1 100 3.12E-33 T 11-11-2016 IPR008991 Translation protein SH3-like domain RB7851 5b3103e6e8306805137359e1c111b093 115 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 96 17.787 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7851 5b3103e6e8306805137359e1c111b093 115 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 101 3.4E-23 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7851 5b3103e6e8306805137359e1c111b093 115 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 5.3E-33 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7851 5b3103e6e8306805137359e1c111b093 115 Pfam PF00467 KOW motif 5 36 4.2E-8 T 11-11-2016 IPR005824 KOW RB382 69620275be31569e34fb51eda8839e53 214 Pfam PF07590 Protein of unknown function (DUF1556) 118 191 2.3E-27 T 11-11-2016 IPR011450 Protein of unknown function DUF1556 RB4990 41206e7325e2da728300001c7c0c6bc5 354 Gene3D G3DSA:3.30.700.10 20 78 2.4E-7 T 11-11-2016 RB4990 41206e7325e2da728300001c7c0c6bc5 354 SUPERFAMILY SSF54523 141 156 7.85E-21 T 11-11-2016 RB4990 41206e7325e2da728300001c7c0c6bc5 354 SUPERFAMILY SSF54523 20 109 7.85E-21 T 11-11-2016 RB4990 41206e7325e2da728300001c7c0c6bc5 354 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 39 1.5E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4990 41206e7325e2da728300001c7c0c6bc5 354 Pfam PF07596 Protein of unknown function (DUF1559) 44 336 4.8E-74 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB4990 41206e7325e2da728300001c7c0c6bc5 354 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 14 38 1.9E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4532 f874b50d6d9a0115d6905354443d061b 504 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 106 245 2.7E-9 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB4532 f874b50d6d9a0115d6905354443d061b 504 Pfam PF13437 HlyD family secretion protein 294 388 1.1E-6 T 11-11-2016 RB4532 f874b50d6d9a0115d6905354443d061b 504 Gene3D G3DSA:2.40.50.100 118 151 2.1E-4 T 11-11-2016 RB3571 19979efca3535f4bf9b1bf2c5da0a9ad 1181 Pfam PF07619 Protein of unknown function (DUF1581) 413 496 1.3E-34 T 11-11-2016 IPR022660 Domain of unknown function DUF1581 RB3571 19979efca3535f4bf9b1bf2c5da0a9ad 1181 Pfam PF07676 WD40-like Beta Propeller Repeat 968 987 5.3E-5 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB3571 19979efca3535f4bf9b1bf2c5da0a9ad 1181 Pfam PF07622 Protein of unknown function (DUF1583) 516 910 1.7E-171 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB3571 19979efca3535f4bf9b1bf2c5da0a9ad 1181 Gene3D G3DSA:2.120.10.30 886 1001 6.6E-16 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3571 19979efca3535f4bf9b1bf2c5da0a9ad 1181 Gene3D G3DSA:2.120.10.30 1002 1166 1.5E-17 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3571 19979efca3535f4bf9b1bf2c5da0a9ad 1181 SUPERFAMILY SSF82171 889 1167 1.31E-27 T 11-11-2016 RB2761 7a59a302cbc77ea31d82cb39f3bb8bbb 259 SUPERFAMILY SSF57997 30 117 7.52E-5 T 11-11-2016 RB2761 7a59a302cbc77ea31d82cb39f3bb8bbb 259 Gene3D G3DSA:3.30.1330.60 128 254 3.1E-21 T 11-11-2016 IPR006665 OmpA-like domain RB2761 7a59a302cbc77ea31d82cb39f3bb8bbb 259 SUPERFAMILY SSF103088 138 256 2.22E-19 T 11-11-2016 IPR006665 OmpA-like domain RB2761 7a59a302cbc77ea31d82cb39f3bb8bbb 259 Pfam PF00691 OmpA family 147 248 6.3E-14 T 11-11-2016 IPR006665 OmpA-like domain RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 SUPERFAMILY SSF52096 8 315 1.4E-92 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 315 46.293 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 Gene3D G3DSA:3.90.226.10 54 271 2.0E-44 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 5 318 2.7E-122 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 147 8.4E-53 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 6.1E-36 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 6.1E-36 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 6.1E-36 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 6.1E-36 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 6.1E-36 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB8310 03c878270b14b64f47f64c0cfdd6bc90 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 6.1E-36 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB4749 7c5101dcb5e090b3774f621320c386d0 329 Gene3D G3DSA:1.10.8.310 21 106 4.9E-17 T 11-11-2016 IPR027420 DNA polymerase beta, N-terminal domain RB4749 7c5101dcb5e090b3774f621320c386d0 329 SUPERFAMILY SSF47802 22 106 2.75E-13 T 11-11-2016 IPR010996 DNA polymerase beta-like, N-terminal domain RB4749 7c5101dcb5e090b3774f621320c386d0 329 SUPERFAMILY SSF47781 112 170 1.53E-10 T 11-11-2016 IPR010994 RuvA domain 2-like RB4749 7c5101dcb5e090b3774f621320c386d0 329 Gene3D G3DSA:1.10.150.20 116 167 9.3E-6 T 11-11-2016 RB4749 7c5101dcb5e090b3774f621320c386d0 329 Pfam PF14520 Helix-hairpin-helix domain 116 166 6.3E-9 T 11-11-2016 RB4749 7c5101dcb5e090b3774f621320c386d0 329 Pfam PF14716 Helix-hairpin-helix domain 22 91 2.5E-13 T 11-11-2016 IPR010996 DNA polymerase beta-like, N-terminal domain RB6057 b0ac928040a2ca511be34fd609091bb5 922 SUPERFAMILY SSF48239 169 471 1.57E-28 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB6057 b0ac928040a2ca511be34fd609091bb5 922 Pfam PF13709 Domain of unknown function (DUF4159) 500 683 2.2E-18 T 11-11-2016 IPR025297 Domain of unknown function DUF4159 RB6057 b0ac928040a2ca511be34fd609091bb5 922 Pfam PF13709 Domain of unknown function (DUF4159) 725 920 3.9E-20 T 11-11-2016 IPR025297 Domain of unknown function DUF4159 RB6057 b0ac928040a2ca511be34fd609091bb5 922 Gene3D G3DSA:1.50.10.20 170 474 5.6E-19 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9039 0b836ece7e97de40d4507936c7b8b75f 490 Gene3D G3DSA:3.40.720.10 329 464 1.7E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9039 0b836ece7e97de40d4507936c7b8b75f 490 Pfam PF07394 Protein of unknown function (DUF1501) 63 483 5.4E-157 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB9039 0b836ece7e97de40d4507936c7b8b75f 490 SUPERFAMILY SSF53649 307 477 7.19E-22 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3830 251e65043de1c10ac7cabe78413a8f92 214 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 198 4.7E-13 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3830 251e65043de1c10ac7cabe78413a8f92 214 SUPERFAMILY SSF52266 3 211 3.05E-25 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3830 251e65043de1c10ac7cabe78413a8f92 214 Gene3D G3DSA:3.40.50.1110 1 210 2.3E-51 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB11013 82718fb972c450e79647cb01ac0994ff 218 Pfam PF16357 Putative PepSY_TM-like 24 218 3.3E-84 T 11-11-2016 IPR032307 Putative PepSY TM-like protein RB13330 8349c01a55edf6cb665affc72b9d807f 588 Pfam PF07719 Tetratricopeptide repeat 510 542 8.7E-6 T 11-11-2016 IPR013105 Tetratricopeptide repeat 2 RB13330 8349c01a55edf6cb665affc72b9d807f 588 Gene3D G3DSA:1.25.40.10 475 587 1.1E-23 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13330 8349c01a55edf6cb665affc72b9d807f 588 SUPERFAMILY SSF48452 472 585 5.15E-23 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13330 8349c01a55edf6cb665affc72b9d807f 588 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 91 239 4.0E-15 T 11-11-2016 RB13330 8349c01a55edf6cb665affc72b9d807f 588 SMART SM00028 476 509 2.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB13330 8349c01a55edf6cb665affc72b9d807f 588 SMART SM00028 510 543 3.5E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB13330 8349c01a55edf6cb665affc72b9d807f 588 SMART SM00028 544 577 2.8E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10428 ec027f4a8f5363a5c8d06e0d8ac345a3 428 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 338 422 6.2E-10 T 11-11-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain RB10428 ec027f4a8f5363a5c8d06e0d8ac345a3 428 Pfam PF01943 Polysaccharide biosynthesis protein 11 285 2.4E-12 T 11-11-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RB11320 dc194c8dc2adc7ea1b44746a2577e4d3 722 Gene3D G3DSA:1.25.40.10 558 685 1.3E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11320 dc194c8dc2adc7ea1b44746a2577e4d3 722 SUPERFAMILY SSF56112 222 320 5.1E-5 T 11-11-2016 IPR011009 Protein kinase-like domain RB7841 76dfd641d5cda74b258522c52fde573f 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 34.374 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7841 76dfd641d5cda74b258522c52fde573f 138 PRINTS PR00060 Ribosomal protein L16 signature 43 54 2.0E-32 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7841 76dfd641d5cda74b258522c52fde573f 138 PRINTS PR00060 Ribosomal protein L16 signature 25 37 2.0E-32 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7841 76dfd641d5cda74b258522c52fde573f 138 PRINTS PR00060 Ribosomal protein L16 signature 59 88 2.0E-32 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7841 76dfd641d5cda74b258522c52fde573f 138 PRINTS PR00060 Ribosomal protein L16 signature 89 118 2.0E-32 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7841 76dfd641d5cda74b258522c52fde573f 138 Pfam PF00252 Ribosomal protein L16p/L10e 5 133 2.2E-41 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RB7841 76dfd641d5cda74b258522c52fde573f 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7841 76dfd641d5cda74b258522c52fde573f 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 3 128 2.9E-50 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7841 76dfd641d5cda74b258522c52fde573f 138 Gene3D G3DSA:3.90.1170.10 23 136 6.9E-45 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RB7841 76dfd641d5cda74b258522c52fde573f 138 SUPERFAMILY SSF54686 3 136 2.49E-48 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RB8194 eefd34834ed6cf3990c78eb4e96d2013 410 Pfam PF07596 Protein of unknown function (DUF1559) 35 368 3.5E-66 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8194 eefd34834ed6cf3990c78eb4e96d2013 410 Pfam PF13633 Prokaryotic N-terminal methylation site 9 34 6.1E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8194 eefd34834ed6cf3990c78eb4e96d2013 410 Gene3D G3DSA:3.30.700.10 11 74 8.2E-7 T 11-11-2016 RB8194 eefd34834ed6cf3990c78eb4e96d2013 410 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 7.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8194 eefd34834ed6cf3990c78eb4e96d2013 410 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8194 eefd34834ed6cf3990c78eb4e96d2013 410 SUPERFAMILY SSF54523 11 163 1.8E-27 T 11-11-2016 RB6708 576a21dfa699b1e627ef851012ad5664 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB6708 576a21dfa699b1e627ef851012ad5664 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB6708 576a21dfa699b1e627ef851012ad5664 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6708 576a21dfa699b1e627ef851012ad5664 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB2160 9eb4cbacbb11da611d9594c485af41f0 719 Pfam PF09094 Domain of unknown function (DUF1925) 314 396 5.8E-37 T 11-11-2016 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain RB2160 9eb4cbacbb11da611d9594c485af41f0 719 SUPERFAMILY SSF74650 408 703 1.66E-83 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RB2160 9eb4cbacbb11da611d9594c485af41f0 719 SUPERFAMILY SSF88713 5 282 2.05E-66 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RB2160 9eb4cbacbb11da611d9594c485af41f0 719 Pfam PF03065 Glycosyl hydrolase family 57 9 292 7.2E-42 T 11-11-2016 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 RB2160 9eb4cbacbb11da611d9594c485af41f0 719 Gene3D G3DSA:2.70.98.10 409 699 2.5E-89 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 RB2160 9eb4cbacbb11da611d9594c485af41f0 719 SUPERFAMILY SSF88688 314 397 2.81E-32 T 11-11-2016 IPR028995 Glycoside hydrolase families 57/38, central domain RB2160 9eb4cbacbb11da611d9594c485af41f0 719 Gene3D G3DSA:3.20.110.10 67 277 5.6E-25 T 11-11-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain RB2160 9eb4cbacbb11da611d9594c485af41f0 719 Gene3D G3DSA:3.20.110.10 5 66 4.8E-7 T 11-11-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain RB2160 9eb4cbacbb11da611d9594c485af41f0 719 Pfam PF09095 Domain of unknown function (DUF1926) 413 699 2.0E-96 T 11-11-2016 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 RB2160 9eb4cbacbb11da611d9594c485af41f0 719 ProDom PD014405 HYDROLASE METABOLISM CARBOHYDRATE GLYCOSIDASE ALPHA-AMYLASE TRANSFERASE 4-ALPHA-GLUCANOTRANSFERASE GLYCOSYLTRANSFERASE FAMILY DIRECT 322 397 1.0E-39 T 11-11-2016 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain RB4919 db95532a74598ff1371566cc7fb5152c 173 Gene3D G3DSA:3.40.1260.10 55 171 4.4E-18 T 11-11-2016 IPR027396 DsrEFH-like RB4919 db95532a74598ff1371566cc7fb5152c 173 Pfam PF02635 DsrE/DsrF-like family 64 171 8.2E-10 T 11-11-2016 IPR003787 Sulphur relay, DsrE/F-like protein RB4919 db95532a74598ff1371566cc7fb5152c 173 SUPERFAMILY SSF75169 55 172 4.04E-18 T 11-11-2016 IPR027396 DsrEFH-like RB11931 ba51a60ae63a3aecfe50be317d469be3 389 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 99 388 14.244 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 RB11931 ba51a60ae63a3aecfe50be317d469be3 389 Pfam PF01040 UbiA prenyltransferase family 116 373 2.2E-43 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RB11931 ba51a60ae63a3aecfe50be317d469be3 389 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 102 385 5.8E-63 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 RB11931 ba51a60ae63a3aecfe50be317d469be3 389 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 154 176 - T 11-11-2016 IPR030470 UbiA prenyltransferase conserved site RB9982 04851ca64732686a7b95b24650254f06 393 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 48 151 1.4E-14 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB9982 04851ca64732686a7b95b24650254f06 393 SUPERFAMILY SSF55347 158 309 2.39E-14 T 11-11-2016 RB9982 04851ca64732686a7b95b24650254f06 393 Gene3D G3DSA:3.30.360.10 167 375 1.3E-20 T 11-11-2016 RB9982 04851ca64732686a7b95b24650254f06 393 Gene3D G3DSA:3.40.50.720 29 166 9.1E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9982 04851ca64732686a7b95b24650254f06 393 SUPERFAMILY SSF51735 31 180 1.68E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12006 2f7d6ccf1dd2bfc4cdd23748baaad292 341 Pfam PF13516 Leucine Rich repeat 189 204 1.2 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 RB12006 2f7d6ccf1dd2bfc4cdd23748baaad292 341 Gene3D G3DSA:3.80.10.10 89 339 2.7E-31 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB12006 2f7d6ccf1dd2bfc4cdd23748baaad292 341 SUPERFAMILY SSF52047 68 337 7.06E-26 T 11-11-2016 RB7947 d5bd29cd2285c3edbae25c0b26573cbc 427 Pfam PF13432 Tetratricopeptide repeat 138 192 2.1E-7 T 11-11-2016 RB7947 d5bd29cd2285c3edbae25c0b26573cbc 427 SUPERFAMILY SSF48452 125 285 1.38E-28 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7947 d5bd29cd2285c3edbae25c0b26573cbc 427 Pfam PF13181 Tetratricopeptide repeat 193 223 0.013 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7947 d5bd29cd2285c3edbae25c0b26573cbc 427 SMART SM00028 158 191 4.2E-5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7947 d5bd29cd2285c3edbae25c0b26573cbc 427 SMART SM00028 192 225 0.01 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7947 d5bd29cd2285c3edbae25c0b26573cbc 427 SMART SM00028 124 157 1.7 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7947 d5bd29cd2285c3edbae25c0b26573cbc 427 SMART SM00028 256 289 7.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7947 d5bd29cd2285c3edbae25c0b26573cbc 427 Gene3D G3DSA:1.25.40.10 115 292 7.0E-35 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2507 1e6808ea3410eca35141ceaa3423d1db 392 Gene3D G3DSA:3.90.25.10 202 284 2.4E-52 T 11-11-2016 RB2507 1e6808ea3410eca35141ceaa3423d1db 392 Gene3D G3DSA:3.90.25.10 343 391 2.4E-52 T 11-11-2016 RB2507 1e6808ea3410eca35141ceaa3423d1db 392 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 14 391 3.3E-141 T 11-11-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RB2507 1e6808ea3410eca35141ceaa3423d1db 392 Gene3D G3DSA:3.40.50.720 11 201 1.7E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2507 1e6808ea3410eca35141ceaa3423d1db 392 Pfam PF16363 GDP-mannose 4,6 dehydratase 16 383 4.3E-92 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2507 1e6808ea3410eca35141ceaa3423d1db 392 SUPERFAMILY SSF51735 344 391 4.65E-92 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2507 1e6808ea3410eca35141ceaa3423d1db 392 SUPERFAMILY SSF51735 8 287 4.65E-92 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4712 2b523cbf06e1283064576aa0cee37c12 315 Pfam PF13569 Domain of unknown function (DUF4132) 50 233 2.2E-28 T 11-11-2016 IPR025406 Domain of unknown function DUF4132 RB8779 a86aa29051a7df7f683f0b0aac337a76 500 SUPERFAMILY SSF143548 52 194 1.99E-42 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RB8779 a86aa29051a7df7f683f0b0aac337a76 500 Pfam PF03315 Serine dehydratase beta chain 40 194 5.4E-54 T 11-11-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RB8779 a86aa29051a7df7f683f0b0aac337a76 500 Pfam PF03313 Serine dehydratase alpha chain 229 494 2.2E-103 T 11-11-2016 IPR005130 Serine dehydratase-like, alpha subunit RB8779 a86aa29051a7df7f683f0b0aac337a76 500 Gene3D G3DSA:3.30.1330.90 46 195 4.4E-51 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RB8779 a86aa29051a7df7f683f0b0aac337a76 500 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 39 497 1.8E-206 T 11-11-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RB454 37c98cbb0880439737c96987a70508b3 1003 SUPERFAMILY SSF53335 196 258 6.4E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB454 37c98cbb0880439737c96987a70508b3 1003 Pfam PF06634 Protein of unknown function (DUF1156) 22 83 8.4E-18 T 11-11-2016 IPR009537 Domain of unknown function DUF1156 RB454 37c98cbb0880439737c96987a70508b3 1003 PIRSF PIRSF009427 8 1002 0.0 T 11-11-2016 IPR014455 DNA methylase, N-6 adenine-specific, MK1259 type RB454 37c98cbb0880439737c96987a70508b3 1003 Gene3D G3DSA:3.40.50.150 605 636 1.7E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB454 37c98cbb0880439737c96987a70508b3 1003 Gene3D G3DSA:3.40.50.150 220 276 1.7E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB3403 86d5fe99c2b45513b3a6a3f9ebef44f8 491 Gene3D G3DSA:3.30.1120.10 418 473 1.1E-16 T 11-11-2016 RB3403 86d5fe99c2b45513b3a6a3f9ebef44f8 491 Gene3D G3DSA:3.40.720.10 42 417 7.1E-89 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3403 86d5fe99c2b45513b3a6a3f9ebef44f8 491 SUPERFAMILY SSF53649 42 472 6.54E-106 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3403 86d5fe99c2b45513b3a6a3f9ebef44f8 491 Pfam PF00884 Sulfatase 44 368 1.6E-54 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10238 9dc2c3c39317198719d06906f02e21c7 577 SUPERFAMILY SSF54523 24 137 4.94E-6 T 11-11-2016 RB10238 9dc2c3c39317198719d06906f02e21c7 577 Pfam PF07596 Protein of unknown function (DUF1559) 33 315 2.9E-58 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB2673 0b88c84f318969f3534bd0bfb66c0160 504 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 91 114 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB2673 0b88c84f318969f3534bd0bfb66c0160 504 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 204 216 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB2673 0b88c84f318969f3534bd0bfb66c0160 504 Pfam PF00069 Protein kinase domain 85 334 4.5E-54 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2673 0b88c84f318969f3534bd0bfb66c0160 504 Gene3D G3DSA:3.30.200.20 80 151 2.5E-25 T 11-11-2016 RB2673 0b88c84f318969f3534bd0bfb66c0160 504 Gene3D G3DSA:1.10.510.10 152 337 9.0E-52 T 11-11-2016 RB2673 0b88c84f318969f3534bd0bfb66c0160 504 SMART SM00220 85 347 9.7E-65 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2673 0b88c84f318969f3534bd0bfb66c0160 504 SUPERFAMILY SSF56112 82 372 3.37E-78 T 11-11-2016 IPR011009 Protein kinase-like domain RB7820 7e0654e1ea463a52c4bc211048ddc1db 157 SUPERFAMILY SSF47973 7 153 9.16E-50 T 11-11-2016 IPR023798 Ribosomal protein S7 domain RB7820 7e0654e1ea463a52c4bc211048ddc1db 157 Pfam PF00177 Ribosomal protein S7p/S5e 7 150 2.5E-56 T 11-11-2016 IPR023798 Ribosomal protein S7 domain RB7820 7e0654e1ea463a52c4bc211048ddc1db 157 PIRSF PIRSF002122 3 157 1.0E-54 T 11-11-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RB7820 7e0654e1ea463a52c4bc211048ddc1db 157 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 11-11-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7820 7e0654e1ea463a52c4bc211048ddc1db 157 Gene3D G3DSA:1.10.455.10 10 157 9.7E-54 T 11-11-2016 IPR023798 Ribosomal protein S7 domain RB7820 7e0654e1ea463a52c4bc211048ddc1db 157 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 157 31.171 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RB7820 7e0654e1ea463a52c4bc211048ddc1db 157 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 7 157 3.1E-55 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RB5326 a9ad119d5cebd4aaccdc32d5f3668211 882 Pfam PF07587 Protein of unknown function (DUF1553) 626 848 1.7E-75 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB5326 a9ad119d5cebd4aaccdc32d5f3668211 882 Pfam PF07583 Protein of unknown function (DUF1549) 243 449 1.4E-69 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB5326 a9ad119d5cebd4aaccdc32d5f3668211 882 Pfam PF07635 Planctomycete cytochrome C 125 181 6.6E-17 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB2432 71ca473b48fa7bd8c1ffbfc89e508f26 277 SUPERFAMILY SSF53474 130 208 1.19E-8 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2432 71ca473b48fa7bd8c1ffbfc89e508f26 277 Pfam PF05277 Protein of unknown function (DUF726) 134 223 1.1E-9 T 11-11-2016 IPR007941 Protein of unknown function DUF726 RB2432 71ca473b48fa7bd8c1ffbfc89e508f26 277 Gene3D G3DSA:3.40.50.1820 153 223 7.0E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8037 f0935327c521ef68c3708985ef8ddc6f 485 Gene3D G3DSA:1.10.150.210 284 334 8.3E-26 T 11-11-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 RB8037 f0935327c521ef68c3708985ef8ddc6f 485 Gene3D G3DSA:3.30.70.260 86 158 8.1E-12 T 11-11-2016 RB8037 f0935327c521ef68c3708985ef8ddc6f 485 Gene3D G3DSA:3.30.70.260 194 273 2.6E-9 T 11-11-2016 RB8037 f0935327c521ef68c3708985ef8ddc6f 485 Gene3D G3DSA:3.40.50.1000 335 463 2.2E-41 T 11-11-2016 IPR023214 HAD-like domain RB8037 f0935327c521ef68c3708985ef8ddc6f 485 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 262 476 1.1E-76 T 11-11-2016 RB8037 f0935327c521ef68c3708985ef8ddc6f 485 SUPERFAMILY SSF56784 269 476 4.01E-50 T 11-11-2016 IPR023214 HAD-like domain RB8037 f0935327c521ef68c3708985ef8ddc6f 485 Pfam PF12710 haloacid dehalogenase-like hydrolase 275 441 1.2E-21 T 11-11-2016 RB8037 f0935327c521ef68c3708985ef8ddc6f 485 SUPERFAMILY SSF55021 83 160 1.05E-10 T 11-11-2016 RB8037 f0935327c521ef68c3708985ef8ddc6f 485 Pfam PF13740 ACT domain 85 158 4.0E-26 T 11-11-2016 RB8037 f0935327c521ef68c3708985ef8ddc6f 485 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 274 444 5.0E-31 T 11-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RB11260 6492304fbda69c95caa92180a9bfada6 121 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 85 109 - T 11-11-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RB11260 6492304fbda69c95caa92180a9bfada6 121 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 80 114 3.5E-13 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RB11260 6492304fbda69c95caa92180a9bfada6 121 SUPERFAMILY SSF57716 82 116 8.84E-9 T 11-11-2016 RB11260 6492304fbda69c95caa92180a9bfada6 121 SUPERFAMILY SSF109635 10 81 1.06E-10 T 11-11-2016 RB10103 ca6004f3ff2d7af74c13bb4cf5fb9070 563 SMART SM00612 333 388 0.01 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB10103 ca6004f3ff2d7af74c13bb4cf5fb9070 563 SMART SM00612 444 492 6.2E-5 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB10103 ca6004f3ff2d7af74c13bb4cf5fb9070 563 SMART SM00612 389 443 2.0 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB10103 ca6004f3ff2d7af74c13bb4cf5fb9070 563 Gene3D G3DSA:2.120.10.80 260 335 1.3E-9 T 11-11-2016 IPR015915 Kelch-type beta propeller GO:0005515 RB10103 ca6004f3ff2d7af74c13bb4cf5fb9070 563 Gene3D G3DSA:2.120.10.80 336 554 3.1E-35 T 11-11-2016 IPR015915 Kelch-type beta propeller GO:0005515 RB10103 ca6004f3ff2d7af74c13bb4cf5fb9070 563 SUPERFAMILY SSF117281 324 547 4.18E-37 T 11-11-2016 RB10103 ca6004f3ff2d7af74c13bb4cf5fb9070 563 Pfam PF01344 Kelch motif 433 478 2.2E-10 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB10103 ca6004f3ff2d7af74c13bb4cf5fb9070 563 Pfam PF01344 Kelch motif 268 318 8.2E-6 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB3849 d2dce591733991c87962bebafa224aca 637 Gene3D G3DSA:3.30.1120.10 405 463 9.9E-19 T 11-11-2016 RB3849 d2dce591733991c87962bebafa224aca 637 Gene3D G3DSA:3.40.720.10 56 404 3.8E-96 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3849 d2dce591733991c87962bebafa224aca 637 Pfam PF00884 Sulfatase 58 368 1.1E-60 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3849 d2dce591733991c87962bebafa224aca 637 SUPERFAMILY SSF53649 56 462 2.09E-109 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6845 0ec72381be7408a2bd90b80ac885270d 497 Gene3D G3DSA:3.40.50.300 331 492 5.8E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6845 0ec72381be7408a2bd90b80ac885270d 497 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 332 492 3.2E-8 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RB6845 0ec72381be7408a2bd90b80ac885270d 497 SUPERFAMILY SSF52540 331 494 6.2E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1586 f1e1b7623ed2b7597fcec469685d92f0 461 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 56 297 2.4E-36 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB1586 f1e1b7623ed2b7597fcec469685d92f0 461 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 205 221 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site RB1586 f1e1b7623ed2b7597fcec469685d92f0 461 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 306 416 1.1E-28 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RB1586 f1e1b7623ed2b7597fcec469685d92f0 461 SUPERFAMILY SSF53901 265 459 4.24E-55 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB1586 f1e1b7623ed2b7597fcec469685d92f0 461 Gene3D G3DSA:3.40.47.10 313 460 2.1E-43 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB1586 f1e1b7623ed2b7597fcec469685d92f0 461 SMART SM00825 Beta-ketoacyl synthase 58 449 5.6E-15 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RB1586 f1e1b7623ed2b7597fcec469685d92f0 461 Gene3D G3DSA:3.40.47.10 56 307 3.7E-53 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB1586 f1e1b7623ed2b7597fcec469685d92f0 461 SUPERFAMILY SSF53901 55 302 1.79E-53 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB5038 642285ec675fe61f3e2d2a0890df73e7 191 Pfam PF01575 MaoC like domain 52 151 4.3E-14 T 11-11-2016 IPR002539 MaoC-like domain RB5038 642285ec675fe61f3e2d2a0890df73e7 191 Gene3D G3DSA:3.10.129.10 34 182 5.7E-29 T 11-11-2016 IPR029069 HotDog domain RB5038 642285ec675fe61f3e2d2a0890df73e7 191 SUPERFAMILY SSF54637 38 180 1.44E-24 T 11-11-2016 IPR029069 HotDog domain RB11415 bcd2d4b4b826f910f7b648c76f34ad6d 606 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 417 507 5.7E-10 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB11415 bcd2d4b4b826f910f7b648c76f34ad6d 606 SUPERFAMILY SSF52540 350 509 3.43E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11415 bcd2d4b4b826f910f7b648c76f34ad6d 606 SUPERFAMILY SSF52540 38 63 3.43E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11415 bcd2d4b4b826f910f7b648c76f34ad6d 606 Gene3D G3DSA:3.40.50.300 266 267 1.4E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11415 bcd2d4b4b826f910f7b648c76f34ad6d 606 Gene3D G3DSA:3.40.50.300 48 194 1.4E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11415 bcd2d4b4b826f910f7b648c76f34ad6d 606 Gene3D G3DSA:3.40.50.300 399 520 1.4E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11415 bcd2d4b4b826f910f7b648c76f34ad6d 606 TIGRFAM TIGR04435 restrict_AAA_1: restriction system-associated AAA family ATPase 1 603 3.9E-235 T 11-11-2016 IPR030974 Restriction system-associated AAA family ATPase RB11415 bcd2d4b4b826f910f7b648c76f34ad6d 606 Gene3D G3DSA:3.40.50.300 1 47 1.4E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4333 96c6dda2d4ca4fc0ee7471c47660020c 361 Pfam PF13439 Glycosyltransferase Family 4 18 175 3.8E-17 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB4333 96c6dda2d4ca4fc0ee7471c47660020c 361 Gene3D G3DSA:3.40.50.2000 182 321 5.7E-17 T 11-11-2016 RB4333 96c6dda2d4ca4fc0ee7471c47660020c 361 Pfam PF00534 Glycosyl transferases group 1 180 322 1.7E-15 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB4333 96c6dda2d4ca4fc0ee7471c47660020c 361 SUPERFAMILY SSF53756 15 349 6.1E-60 T 11-11-2016 RB5901 d19fda27a4f6f8dfe0e01e32e55bf625 700 Pfam PF00092 von Willebrand factor type A domain 204 365 9.1E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB5901 d19fda27a4f6f8dfe0e01e32e55bf625 700 SMART SM00327 201 393 1.4E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB5901 d19fda27a4f6f8dfe0e01e32e55bf625 700 Gene3D G3DSA:3.40.50.410 200 389 8.6E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB5901 d19fda27a4f6f8dfe0e01e32e55bf625 700 SUPERFAMILY SSF53300 204 371 3.52E-13 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7228 f4324ff6781a66f527001b6c2aeb3085 493 Gene3D G3DSA:3.40.720.10 363 478 1.0E-7 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7228 f4324ff6781a66f527001b6c2aeb3085 493 Pfam PF07394 Protein of unknown function (DUF1501) 69 492 5.0E-163 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB7228 f4324ff6781a66f527001b6c2aeb3085 493 SUPERFAMILY SSF53649 317 476 3.27E-21 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10787 39413a56c985b1ca6f930a115d619489 487 Gene3D G3DSA:3.40.50.10180 29 290 3.0E-71 T 11-11-2016 RB10787 39413a56c985b1ca6f930a115d619489 487 Pfam PF05161 MOFRL family 358 471 1.0E-29 T 11-11-2016 IPR007835 MOFRL domain Reactome: R-HSA-70350 RB10787 39413a56c985b1ca6f930a115d619489 487 SUPERFAMILY SSF82544 27 477 1.7E-107 T 11-11-2016 RB10787 39413a56c985b1ca6f930a115d619489 487 Pfam PF13660 Domain of unknown function (DUF4147) 29 278 4.4E-68 T 11-11-2016 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 RB10787 39413a56c985b1ca6f930a115d619489 487 Gene3D G3DSA:3.40.1480.10 291 479 6.2E-50 T 11-11-2016 IPR007835 MOFRL domain Reactome: R-HSA-70350 RB6499 b362a790569c0ded48126cdc20fea3ab 314 Pfam PF00892 EamA-like transporter family 15 156 1.1E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RB6499 b362a790569c0ded48126cdc20fea3ab 314 SUPERFAMILY SSF103481 56 160 6.93E-13 T 11-11-2016 RB6499 b362a790569c0ded48126cdc20fea3ab 314 TIGRFAM TIGR00688 rarD: protein RarD 16 273 8.0E-62 T 11-11-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 RB6499 b362a790569c0ded48126cdc20fea3ab 314 SUPERFAMILY SSF103481 222 301 1.7E-10 T 11-11-2016 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1337 1466 3.6E-32 T 11-11-2016 IPR013427 Haem-binding domain, putative RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 495 869 4.2E-126 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 SUPERFAMILY SSF50952 756 857 7.45E-12 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 SUPERFAMILY SSF50952 483 722 7.45E-12 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 SUPERFAMILY SSF46626 1330 1390 2.43E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 SUPERFAMILY SSF46626 1442 1466 2.43E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Gene3D G3DSA:2.130.10.130 293 443 9.5E-14 T 11-11-2016 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Gene3D G3DSA:2.130.10.130 71 254 1.3E-11 T 11-11-2016 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Gene3D G3DSA:1.25.10.10 884 1031 9.8E-4 T 11-11-2016 IPR011989 Armadillo-like helical RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Gene3D G3DSA:1.25.10.10 1166 1272 6.9E-5 T 11-11-2016 IPR011989 Armadillo-like helical RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Gene3D G3DSA:2.120.10.30 491 870 1.2E-30 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 SUPERFAMILY SSF69318 68 443 3.14E-46 T 11-11-2016 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Gene3D G3DSA:1.10.760.10 1339 1385 4.4E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Gene3D G3DSA:1.10.760.10 1442 1469 4.4E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 301 371 1.4E-8 T 11-11-2016 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 Pfam PF00034 Cytochrome c 1340 1466 5.4E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3919 d0f8f7c0220f9e99bbb6e96bbc022b3a 1617 SUPERFAMILY SSF48371 877 1217 1.21E-7 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB6494 85a7b295b2b684baaa38b982080c88b1 676 Gene3D G3DSA:1.10.8.60 201 276 3.6E-30 T 11-11-2016 RB6494 85a7b295b2b684baaa38b982080c88b1 676 Gene3D G3DSA:1.20.272.10 277 395 8.7E-12 T 11-11-2016 RB6494 85a7b295b2b684baaa38b982080c88b1 676 Gene3D G3DSA:3.40.50.300 49 200 1.0E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6494 85a7b295b2b684baaa38b982080c88b1 676 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 37 393 6.8E-132 T 11-11-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RB6494 85a7b295b2b684baaa38b982080c88b1 676 SUPERFAMILY SSF52540 68 256 1.68E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6494 85a7b295b2b684baaa38b982080c88b1 676 SMART SM00382 71 213 2.9E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6494 85a7b295b2b684baaa38b982080c88b1 676 SUPERFAMILY SSF48019 277 403 7.65E-20 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RB6494 85a7b295b2b684baaa38b982080c88b1 676 Pfam PF13177 DNA polymerase III, delta subunit 54 212 1.7E-37 T 11-11-2016 RB6494 85a7b295b2b684baaa38b982080c88b1 676 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 267 398 1.1E-14 T 11-11-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RB7114 58fc27a3d84cdd6530c8e46736599d47 347 SUPERFAMILY SSF46589 20 103 1.88E-11 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 RB7114 58fc27a3d84cdd6530c8e46736599d47 347 Pfam PF01409 tRNA synthetases class II core domain (F) 97 347 1.3E-93 T 11-11-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RB7114 58fc27a3d84cdd6530c8e46736599d47 347 Gene3D G3DSA:3.30.930.10 16 347 1.3E-112 T 11-11-2016 RB7114 58fc27a3d84cdd6530c8e46736599d47 347 SUPERFAMILY SSF55681 97 347 1.36E-73 T 11-11-2016 RB7114 58fc27a3d84cdd6530c8e46736599d47 347 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 45 347 1.6E-92 T 11-11-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RB7114 58fc27a3d84cdd6530c8e46736599d47 347 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 26 85 1.4E-14 T 11-11-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RB7114 58fc27a3d84cdd6530c8e46736599d47 347 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 14 347 40.61 T 11-11-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RB11807 e058fb3e0a62cf1ef0a9fe19b4a94afc 234 Pfam PF07589 PEP-CTERM motif 205 228 1.2E-4 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB11807 e058fb3e0a62cf1ef0a9fe19b4a94afc 234 Gene3D G3DSA:3.40.390.10 41 168 4.9E-5 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB11807 e058fb3e0a62cf1ef0a9fe19b4a94afc 234 SUPERFAMILY SSF55486 29 162 6.86E-10 T 11-11-2016 RB11807 e058fb3e0a62cf1ef0a9fe19b4a94afc 234 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 206 228 0.0011 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB2974 6762fad91cc36c4d2c8759b153563b0c 883 Gene3D G3DSA:3.30.460.10 37 106 3.1E-4 T 11-11-2016 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 SUPERFAMILY SSF81301 9 174 2.94E-17 T 11-11-2016 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 SUPERFAMILY SSF109604 423 540 5.02E-9 T 11-11-2016 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 Gene3D G3DSA:1.10.3210.10 433 609 1.6E-16 T 11-11-2016 IPR006674 HD domain RB2974 6762fad91cc36c4d2c8759b153563b0c 883 SUPERFAMILY SSF81593 185 313 3.14E-14 T 11-11-2016 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 PIRSF PIRSF006288 1 883 2.5E-256 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 25 878 2.1E-168 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 Pfam PF01966 HD domain 458 543 1.6E-5 T 11-11-2016 IPR006674 HD domain RB2974 6762fad91cc36c4d2c8759b153563b0c 883 Pfam PF03445 Putative nucleotidyltransferase DUF294 29 127 1.9E-4 T 11-11-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 Gene3D G3DSA:3.30.70.260 806 865 5.9E-7 T 11-11-2016 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 Gene3D G3DSA:3.30.70.260 700 759 3.0E-4 T 11-11-2016 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 Pfam PF08335 GlnD PII-uridylyltransferase 185 316 8.8E-27 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 SUPERFAMILY SSF55021 805 863 7.91E-8 T 11-11-2016 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 SUPERFAMILY SSF55021 699 760 4.58E-5 T 11-11-2016 RB2974 6762fad91cc36c4d2c8759b153563b0c 883 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 883 140.734 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RB6353 2f81129f569a1bed67c599096e324763 205 SUPERFAMILY SSF46626 29 180 2.58E-25 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6353 2f81129f569a1bed67c599096e324763 205 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 97 170 7.1E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6353 2f81129f569a1bed67c599096e324763 205 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 12 51 2.6E-17 T 11-11-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal RB6353 2f81129f569a1bed67c599096e324763 205 Gene3D G3DSA:1.10.760.10 33 55 3.6E-25 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6353 2f81129f569a1bed67c599096e324763 205 Gene3D G3DSA:1.10.760.10 91 189 3.6E-25 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6353 2f81129f569a1bed67c599096e324763 205 PRINTS PR00605 Class IC cytochrome C signature 148 170 9.9E-6 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RB6353 2f81129f569a1bed67c599096e324763 205 PRINTS PR00605 Class IC cytochrome C signature 106 117 9.9E-6 T 11-11-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RB10989 e8d0971f770d079b24138355b7af27cc 149 Gene3D G3DSA:3.40.630.30 3 142 4.1E-35 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10989 e8d0971f770d079b24138355b7af27cc 149 Pfam PF13673 Acetyltransferase (GNAT) domain 17 139 4.6E-24 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB10989 e8d0971f770d079b24138355b7af27cc 149 SUPERFAMILY SSF55729 3 140 6.2E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB5678 2e4fcd4f88fa48690b9aebe406fa46f0 336 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 241 329 2.5E-24 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RB5678 2e4fcd4f88fa48690b9aebe406fa46f0 336 Gene3D G3DSA:3.40.47.10 164 329 8.0E-39 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB5678 2e4fcd4f88fa48690b9aebe406fa46f0 336 Gene3D G3DSA:3.40.47.10 5 163 1.6E-49 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB5678 2e4fcd4f88fa48690b9aebe406fa46f0 336 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 186 5.3E-24 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RB5678 2e4fcd4f88fa48690b9aebe406fa46f0 336 SUPERFAMILY SSF53901 7 329 2.03E-53 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB11882 a0fe9ec6b256b6e486eccfa2934c1502 166 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 40 162 1.6E-38 T 11-11-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-73614 RB11882 a0fe9ec6b256b6e486eccfa2934c1502 166 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 38 136 1.5E-15 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RB11882 a0fe9ec6b256b6e486eccfa2934c1502 166 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 88 126 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RB11882 a0fe9ec6b256b6e486eccfa2934c1502 166 SUPERFAMILY SSF53927 34 163 1.34E-41 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 RB11882 a0fe9ec6b256b6e486eccfa2934c1502 166 Gene3D G3DSA:3.40.140.10 34 164 3.0E-48 T 11-11-2016 RB5837 5f39d400c79c5ac8a254c38ced30b9c0 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 123 139 2.8E-16 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RB5837 5f39d400c79c5ac8a254c38ced30b9c0 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 175 187 2.8E-16 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RB5837 5f39d400c79c5ac8a254c38ced30b9c0 294 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 226 245 2.8E-16 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RB5837 5f39d400c79c5ac8a254c38ced30b9c0 294 Gene3D G3DSA:2.10.109.10 226 268 6.8E-28 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RB5837 5f39d400c79c5ac8a254c38ced30b9c0 294 Gene3D G3DSA:2.10.109.10 121 185 6.8E-28 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RB5837 5f39d400c79c5ac8a254c38ced30b9c0 294 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 110 266 4.5E-43 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RB5837 5f39d400c79c5ac8a254c38ced30b9c0 294 Pfam PF00717 Peptidase S24-like 130 199 3.8E-10 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B RB5837 5f39d400c79c5ac8a254c38ced30b9c0 294 SUPERFAMILY SSF51306 122 272 4.53E-41 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 PRINTS PR00045 Sigma-54 factor signature 437 448 2.3E-22 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 PRINTS PR00045 Sigma-54 factor signature 495 513 2.3E-22 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 PRINTS PR00045 Sigma-54 factor signature 421 433 2.3E-22 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 PRINTS PR00045 Sigma-54 factor signature 232 249 2.3E-22 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 500 507 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 39 519 3.7E-116 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 PIRSF PIRSF000774 29 522 5.2E-131 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 Pfam PF04963 Sigma-54 factor, core binding domain 156 347 4.7E-43 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 35 78 1.2E-14 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RB6491 8820b2ad71ca67c50cdcac60bb515a05 526 Pfam PF04552 Sigma-54, DNA binding domain 362 519 2.1E-61 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding RB4310 60d2e391838f94d1cb81100e62a6c187 519 SUPERFAMILY SSF111369 278 421 3.66E-7 T 11-11-2016 RB4310 60d2e391838f94d1cb81100e62a6c187 519 Pfam PF13533 Biotin-lipoyl like 96 142 4.6E-7 T 11-11-2016 RB4310 60d2e391838f94d1cb81100e62a6c187 519 Gene3D G3DSA:2.40.50.100 96 128 2.5E-8 T 11-11-2016 RB4310 60d2e391838f94d1cb81100e62a6c187 519 Gene3D G3DSA:2.40.50.100 305 328 2.5E-8 T 11-11-2016 RB4310 60d2e391838f94d1cb81100e62a6c187 519 Pfam PF13437 HlyD family secretion protein 307 409 1.3E-8 T 11-11-2016 RB778 5ba645d9b992284a5f20d3085f92b151 413 SUPERFAMILY SSF54523 11 161 6.83E-28 T 11-11-2016 RB778 5ba645d9b992284a5f20d3085f92b151 413 Gene3D G3DSA:3.30.700.10 11 76 2.4E-7 T 11-11-2016 RB778 5ba645d9b992284a5f20d3085f92b151 413 Pfam PF07596 Protein of unknown function (DUF1559) 35 371 6.8E-63 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB778 5ba645d9b992284a5f20d3085f92b151 413 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 30 4.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB778 5ba645d9b992284a5f20d3085f92b151 413 Pfam PF13633 Prokaryotic N-terminal methylation site 10 34 3.8E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5316 27e903c6024cdd68c78d7e6baae8f0ca 353 Gene3D G3DSA:2.160.20.10 47 343 7.9E-81 T 11-11-2016 IPR012334 Pectin lyase fold RB5316 27e903c6024cdd68c78d7e6baae8f0ca 353 SUPERFAMILY SSF51126 55 343 2.2E-70 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB5316 27e903c6024cdd68c78d7e6baae8f0ca 353 SMART SM00656 78 276 1.4E-31 T 11-11-2016 IPR002022 Pectate lyase/Amb allergen RB5316 27e903c6024cdd68c78d7e6baae8f0ca 353 Pfam PF00544 Pectate lyase 111 270 6.7E-33 T 11-11-2016 IPR002022 Pectate lyase/Amb allergen RB8748 6a8946261a2535092904ee7edf765c6a 305 Gene3D G3DSA:3.20.20.70 4 303 4.0E-86 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB8748 6a8946261a2535092904ee7edf765c6a 305 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 8 303 5.2E-102 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RB8748 6a8946261a2535092904ee7edf765c6a 305 SUPERFAMILY SSF51395 4 303 1.14E-82 T 11-11-2016 RB8748 6a8946261a2535092904ee7edf765c6a 305 Pfam PF01180 Dihydroorotate dehydrogenase 8 289 4.3E-65 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RB8748 6a8946261a2535092904ee7edf765c6a 305 PIRSF PIRSF000164 1 305 2.8E-73 T 11-11-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 RB8748 6a8946261a2535092904ee7edf765c6a 305 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 242 262 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 RB8748 6a8946261a2535092904ee7edf765c6a 305 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 8 304 36.905 T 11-11-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 RB8231 41d7cba2e66b0df84bd5e77b637dbab8 170 Gene3D G3DSA:3.30.70.260 23 68 5.2E-4 T 11-11-2016 RB8231 41d7cba2e66b0df84bd5e77b637dbab8 170 SUPERFAMILY SSF55021 91 158 9.61E-6 T 11-11-2016 RB8231 41d7cba2e66b0df84bd5e77b637dbab8 170 SUPERFAMILY SSF55021 22 87 1.15E-9 T 11-11-2016 RB4658 0627fadd00b78ae3ed10ab59e40cad9b 193 SMART SM00116 117 165 2.9E-6 T 11-11-2016 IPR000644 CBS domain RB4658 0627fadd00b78ae3ed10ab59e40cad9b 193 SMART SM00116 50 98 2.7E-6 T 11-11-2016 IPR000644 CBS domain RB4658 0627fadd00b78ae3ed10ab59e40cad9b 193 SUPERFAMILY SSF54631 37 166 4.42E-32 T 11-11-2016 RB4658 0627fadd00b78ae3ed10ab59e40cad9b 193 Pfam PF00571 CBS domain 110 164 2.1E-11 T 11-11-2016 IPR000644 CBS domain RB4658 0627fadd00b78ae3ed10ab59e40cad9b 193 Pfam PF00571 CBS domain 43 98 1.1E-10 T 11-11-2016 IPR000644 CBS domain RB4658 0627fadd00b78ae3ed10ab59e40cad9b 193 Gene3D G3DSA:3.10.580.10 40 165 1.5E-30 T 11-11-2016 RB11055 6e717ebcc7f2826629601ccdcd8d115c 733 SUPERFAMILY SSF53590 36 306 1.16E-30 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB11055 6e717ebcc7f2826629601ccdcd8d115c 733 Gene3D G3DSA:3.90.245.10 36 234 6.3E-24 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB11055 6e717ebcc7f2826629601ccdcd8d115c 733 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 38 277 5.1E-21 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB11055 6e717ebcc7f2826629601ccdcd8d115c 733 SUPERFAMILY SSF50939 380 722 6.17E-50 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB11055 6e717ebcc7f2826629601ccdcd8d115c 733 Pfam PF13088 BNR repeat-like domain 396 683 3.2E-32 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB11055 6e717ebcc7f2826629601ccdcd8d115c 733 Gene3D G3DSA:2.120.10.10 375 713 5.7E-51 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB8411 e2e498ab73ea5c66984b487572fb7f8f 362 SMART SM00530 22 76 2.9E-9 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB8411 e2e498ab73ea5c66984b487572fb7f8f 362 Pfam PF01381 Helix-turn-helix 23 74 6.6E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB8411 e2e498ab73ea5c66984b487572fb7f8f 362 SUPERFAMILY SSF47413 19 81 1.29E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB8411 e2e498ab73ea5c66984b487572fb7f8f 362 Gene3D G3DSA:1.10.260.40 21 78 2.8E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 492 700 4.4E-41 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 SUPERFAMILY SSF55186 172 349 1.57E-56 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 SUPERFAMILY SSF52954 699 806 1.16E-26 T 11-11-2016 IPR004154 Anticodon-binding RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Pfam PF03129 Anticodon binding domain 713 802 1.5E-18 T 11-11-2016 IPR004154 Anticodon-binding RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 SUPERFAMILY SSF55681 351 426 1.17E-84 T 11-11-2016 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 SUPERFAMILY SSF55681 486 698 1.17E-84 T 11-11-2016 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Gene3D G3DSA:3.30.54.20 239 295 1.5E-18 T 11-11-2016 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Gene3D G3DSA:3.40.50.800 703 809 2.2E-32 T 11-11-2016 IPR004154 Anticodon-binding RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 SMART SM00863 278 327 8.7E-21 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Gene3D G3DSA:3.30.980.10 296 331 2.1E-34 T 11-11-2016 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Gene3D G3DSA:3.30.980.10 175 237 2.1E-34 T 11-11-2016 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 174 806 31.691 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 490 804 2.3E-127 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Pfam PF02824 TGS domain 105 153 3.2E-7 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 278 327 1.2E-13 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 PRINTS PR01047 Threonyl-tRNA synthetase signature 498 526 8.7E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 PRINTS PR01047 Threonyl-tRNA synthetase signature 706 718 8.7E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 PRINTS PR01047 Threonyl-tRNA synthetase signature 636 664 8.7E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 PRINTS PR01047 Threonyl-tRNA synthetase signature 679 692 8.7E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 PRINTS PR01047 Threonyl-tRNA synthetase signature 531 554 8.7E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 SUPERFAMILY SSF81271 104 154 7.19E-11 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Gene3D G3DSA:3.30.930.10 486 702 2.5E-104 T 11-11-2016 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Gene3D G3DSA:3.30.930.10 350 425 2.5E-104 T 11-11-2016 RB12129 ae4cad4fa0d23c62013666bf10eb2fc6 830 Gene3D G3DSA:3.10.20.30 103 154 2.1E-15 T 11-11-2016 IPR012675 Beta-grasp domain RB1118 398e04815435cd5addfda9bb0f99bd3f 141 Pfam PF04940 Sensors of blue-light using FAD 2 95 1.4E-29 T 11-11-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 RB1118 398e04815435cd5addfda9bb0f99bd3f 141 SUPERFAMILY SSF54975 1 138 2.42E-36 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RB1118 398e04815435cd5addfda9bb0f99bd3f 141 SMART SM01034 2 96 1.5E-41 T 11-11-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 RB8052 f5337ebbdbb183d68c282c68ece353a6 226 Pfam PF03703 Bacterial PH domain 135 206 4.9E-16 T 11-11-2016 IPR005182 Domain of unknown function DUF304 RB10246 cad6e90a33a125e760c11cd416b8a6b7 316 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 29 310 8.4E-46 T 11-11-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 RB11041 3890a9fc7ba3e789536292947de5476e 349 Gene3D G3DSA:3.30.700.10 21 80 9.6E-8 T 11-11-2016 RB11041 3890a9fc7ba3e789536292947de5476e 349 Pfam PF13633 Prokaryotic N-terminal methylation site 19 44 5.2E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11041 3890a9fc7ba3e789536292947de5476e 349 Pfam PF07596 Protein of unknown function (DUF1559) 45 329 6.5E-71 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB11041 3890a9fc7ba3e789536292947de5476e 349 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 40 1.2E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11041 3890a9fc7ba3e789536292947de5476e 349 SUPERFAMILY SSF54523 21 142 4.87E-24 T 11-11-2016 RB9999 99a0a627011bb7ebd6e7b2bd8389ae73 281 Gene3D G3DSA:1.10.10.10 28 139 1.9E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9999 99a0a627011bb7ebd6e7b2bd8389ae73 281 Pfam PF13463 Winged helix DNA-binding domain 38 104 1.3E-4 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB9999 99a0a627011bb7ebd6e7b2bd8389ae73 281 SUPERFAMILY SSF46785 39 249 4.74E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB352 28d66eb12a440f51a925e579c76716d5 484 Gene3D G3DSA:3.30.1120.10 384 480 5.4E-17 T 11-11-2016 RB352 28d66eb12a440f51a925e579c76716d5 484 SUPERFAMILY SSF53649 32 476 1.18E-113 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB352 28d66eb12a440f51a925e579c76716d5 484 Gene3D G3DSA:3.40.720.10 30 378 1.6E-94 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB352 28d66eb12a440f51a925e579c76716d5 484 Pfam PF00884 Sulfatase 33 359 6.8E-66 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB1398 d4eb6bc32e1dbe875c62b8129f51a54a 428 SUPERFAMILY SSF141523 312 427 2.09E-11 T 11-11-2016 RB1398 d4eb6bc32e1dbe875c62b8129f51a54a 428 SUPERFAMILY SSF54106 264 306 2.22E-6 T 11-11-2016 IPR018392 LysM domain RB1398 d4eb6bc32e1dbe875c62b8129f51a54a 428 Gene3D G3DSA:3.10.350.10 264 306 5.0E-7 T 11-11-2016 IPR018392 LysM domain RB1398 d4eb6bc32e1dbe875c62b8129f51a54a 428 Pfam PF01476 LysM domain 264 306 1.2E-7 T 11-11-2016 IPR018392 LysM domain RB1398 d4eb6bc32e1dbe875c62b8129f51a54a 428 Pfam PF03734 L,D-transpeptidase catalytic domain 315 427 4.2E-6 T 11-11-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RB1398 d4eb6bc32e1dbe875c62b8129f51a54a 428 Gene3D G3DSA:2.40.440.10 315 427 1.3E-11 T 11-11-2016 RB3702 eb9c72c10814d6f7cf2c6238824d479c 103 SUPERFAMILY SSF46785 1 79 2.45E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3702 eb9c72c10814d6f7cf2c6238824d479c 103 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB3702 eb9c72c10814d6f7cf2c6238824d479c 103 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB3702 eb9c72c10814d6f7cf2c6238824d479c 103 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB3702 eb9c72c10814d6f7cf2c6238824d479c 103 Gene3D G3DSA:1.10.10.10 1 80 1.1E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3702 eb9c72c10814d6f7cf2c6238824d479c 103 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.0E-18 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RB500 066680904df1caf88ae9677344c1af58 798 SUPERFAMILY SSF53300 91 207 1.59E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB500 066680904df1caf88ae9677344c1af58 798 Pfam PF07584 Aerotolerance regulator N-terminal 1 76 4.5E-19 T 11-11-2016 IPR024163 Aerotolerance regulator, N-terminal RB500 066680904df1caf88ae9677344c1af58 798 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 80 1.4E-28 T 11-11-2016 IPR011933 Double transmembrane domain RB500 066680904df1caf88ae9677344c1af58 798 Pfam PF13519 von Willebrand factor type A domain 91 202 3.3E-11 T 11-11-2016 IPR002035 von Willebrand factor, type A RB500 066680904df1caf88ae9677344c1af58 798 SUPERFAMILY SSF52317 330 594 2.52E-15 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB500 066680904df1caf88ae9677344c1af58 798 Gene3D G3DSA:3.40.50.410 91 209 2.9E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB11934 91c384405bf82349444d8910f8c90f1f 356 Pfam PF02628 Cytochrome oxidase assembly protein 44 225 2.2E-12 T 11-11-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 RB3482 b10307a0095b052263a3a8e41fb68ccd 563 Gene3D G3DSA:3.30.450.90 155 284 2.2E-45 T 11-11-2016 RB3482 b10307a0095b052263a3a8e41fb68ccd 563 Pfam PF00437 Type II/IV secretion system protein 183 451 4.9E-77 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB3482 b10307a0095b052263a3a8e41fb68ccd 563 Gene3D G3DSA:3.40.50.300 289 559 1.2E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3482 b10307a0095b052263a3a8e41fb68ccd 563 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 379 393 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB3482 b10307a0095b052263a3a8e41fb68ccd 563 SMART SM00382 312 433 0.0026 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3482 b10307a0095b052263a3a8e41fb68ccd 563 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 36 137 2.3E-18 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RB3482 b10307a0095b052263a3a8e41fb68ccd 563 SUPERFAMILY SSF160246 3 135 4.97E-28 T 11-11-2016 RB3482 b10307a0095b052263a3a8e41fb68ccd 563 SUPERFAMILY SSF52540 169 558 1.25E-99 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6217 e84d155a4086fc083f17446074e7098e 141 SUPERFAMILY SSF52172 1 134 1.71E-38 T 11-11-2016 IPR011006 CheY-like superfamily RB6217 e84d155a4086fc083f17446074e7098e 141 SMART SM00448 2 115 4.5E-37 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB6217 e84d155a4086fc083f17446074e7098e 141 Pfam PF00072 Response regulator receiver domain 4 116 6.7E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB6217 e84d155a4086fc083f17446074e7098e 141 Gene3D G3DSA:3.40.50.2300 2 127 2.4E-40 T 11-11-2016 RB409 fd073a1658134587732ddef45dd0a0ce 512 Pfam PF00884 Sulfatase 36 396 2.7E-68 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB409 fd073a1658134587732ddef45dd0a0ce 512 ProSitePatterns PS00149 Sulfatases signature 2. 129 139 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB409 fd073a1658134587732ddef45dd0a0ce 512 Gene3D G3DSA:3.40.720.10 34 412 1.4E-103 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB409 fd073a1658134587732ddef45dd0a0ce 512 Gene3D G3DSA:3.30.1120.10 413 507 2.1E-15 T 11-11-2016 RB409 fd073a1658134587732ddef45dd0a0ce 512 Pfam PF16385 Domain of unknown function 399 502 5.9E-11 T 11-11-2016 IPR032158 Domain of unknown function DUF4994 RB409 fd073a1658134587732ddef45dd0a0ce 512 SUPERFAMILY SSF53649 35 145 1.6E-116 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB409 fd073a1658134587732ddef45dd0a0ce 512 SUPERFAMILY SSF53649 176 507 1.6E-116 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB409 fd073a1658134587732ddef45dd0a0ce 512 ProSitePatterns PS00523 Sulfatases signature 1. 83 95 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB9588 6ba7d03479df5e471a69e7388826c707 268 TIGRFAM TIGR02452 TIGR02452: TIGR02452 family protein 5 265 8.8E-113 T 11-11-2016 IPR012664 Conserved hypothetical protein CHP02452 RB9588 6ba7d03479df5e471a69e7388826c707 268 SUPERFAMILY SSF52949 186 249 8.71E-6 T 11-11-2016 RB9588 6ba7d03479df5e471a69e7388826c707 268 Pfam PF10021 Uncharacterized protein conserved in bacteria (DUF2263) 7 150 1.2E-45 T 11-11-2016 IPR019261 Domain of unknown function DUF2263 RB9588 6ba7d03479df5e471a69e7388826c707 268 PIRSF PIRSF014899 1 268 1.5E-114 T 11-11-2016 IPR012664 Conserved hypothetical protein CHP02452 RB8859 63f08355b5e5942c9b7317100a71fd50 332 SUPERFAMILY SSF52283 2 135 6.43E-40 T 11-11-2016 RB8859 63f08355b5e5942c9b7317100a71fd50 332 Gene3D G3DSA:3.40.50.720 119 296 2.9E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8859 63f08355b5e5942c9b7317100a71fd50 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 327 1.2E-28 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RB8859 63f08355b5e5942c9b7317100a71fd50 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 296 1.4E-56 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RB8859 63f08355b5e5942c9b7317100a71fd50 332 Gene3D G3DSA:3.40.50.720 1 118 3.9E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8859 63f08355b5e5942c9b7317100a71fd50 332 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RB8859 63f08355b5e5942c9b7317100a71fd50 332 SUPERFAMILY SSF51735 102 297 5.32E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Pfam PF08264 Anticodon-binding domain of tRNA 846 998 6.1E-28 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 SUPERFAMILY SSF52374 62 250 7.42E-108 T 11-11-2016 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 SUPERFAMILY SSF52374 465 709 7.42E-108 T 11-11-2016 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 SUPERFAMILY SSF52374 741 788 7.42E-108 T 11-11-2016 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 SUPERFAMILY SSF47323 795 1057 3.74E-55 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Gene3D G3DSA:3.40.50.620 741 779 6.2E-125 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Gene3D G3DSA:3.40.50.620 468 709 6.2E-125 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Gene3D G3DSA:3.40.50.620 62 246 6.2E-125 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 606 619 2.3E-24 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 463 478 2.3E-24 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 93 104 2.3E-24 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 273 296 2.3E-24 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 646 655 2.3E-24 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 54 1211 12.674 T 11-11-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 SUPERFAMILY SSF50677 252 465 6.38E-42 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Gene3D G3DSA:3.90.740.10 255 451 3.9E-47 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Gene3D G3DSA:1.10.730.10 788 989 2.0E-48 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 69 705 2.6E-145 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 741 771 1.9E-6 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB7259 514dcbaebe4c6d0155b09fdfcb1ee469 1213 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 60 668 2.0E-192 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 Pfam PF13360 PQQ-like domain 155 401 2.7E-22 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 SUPERFAMILY SSF50998 155 479 2.58E-58 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 SUPERFAMILY SSF50998 30 88 2.58E-58 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 SMART SM00564 237 272 0.013 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 SMART SM00564 283 316 74.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 SMART SM00564 74 171 30.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 SMART SM00564 374 407 660.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 SMART SM00564 192 222 10.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 Gene3D G3DSA:2.140.10.10 2 86 1.7E-64 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB11142 c36d3c2aaa860bb3064a86befbdef5db 481 Gene3D G3DSA:2.140.10.10 153 480 1.7E-64 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB10026 ca729c3093e6e23e28ed9fced606da1e 883 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 535 854 3.0E-73 T 11-11-2016 IPR007296 Domain of unknown function DUF403 RB10026 ca729c3093e6e23e28ed9fced606da1e 883 SUPERFAMILY SSF56059 365 486 2.61E-17 T 11-11-2016 RB10026 ca729c3093e6e23e28ed9fced606da1e 883 SUPERFAMILY SSF56059 69 247 2.61E-17 T 11-11-2016 RB10026 ca729c3093e6e23e28ed9fced606da1e 883 Pfam PF14403 Circularly permuted ATP-grasp type 2 109 485 1.3E-131 T 11-11-2016 IPR025841 Circularly permuted ATP-grasp type 2 RB8783 8fbb8eb7449ada53b9e1f5b0d16a4613 321 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 311 2.9E-22 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB8783 8fbb8eb7449ada53b9e1f5b0d16a4613 321 SUPERFAMILY SSF56219 62 315 2.75E-41 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB8783 8fbb8eb7449ada53b9e1f5b0d16a4613 321 Gene3D G3DSA:3.60.10.10 67 317 1.5E-20 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB1964 d30bb5c9f9510668050f71a14f957d5e 500 Pfam PF14559 Tetratricopeptide repeat 262 317 6.4E-6 T 11-11-2016 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 SMART SM00028 145 178 86.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 SMART SM00028 282 315 1.3E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 SMART SM00028 214 247 23.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 SMART SM00028 248 281 3.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 429 491 4.5E-21 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 343 403 2.2E-20 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 Gene3D G3DSA:1.10.150.20 343 411 4.6E-24 T 11-11-2016 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 SUPERFAMILY SSF47789 435 498 5.89E-18 T 11-11-2016 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 Gene3D G3DSA:1.10.150.20 434 498 2.6E-21 T 11-11-2016 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 SUPERFAMILY SSF47789 346 411 9.94E-20 T 11-11-2016 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 SUPERFAMILY SSF48452 119 324 9.67E-21 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 Gene3D G3DSA:1.25.40.10 115 323 1.0E-30 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 439 498 9.0E-28 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB1964 d30bb5c9f9510668050f71a14f957d5e 500 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 351 410 3.0E-27 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB11510 b5f7437e5645ca4aa7ab83ebf4dfd7d1 266 Pfam PF01588 Putative tRNA binding domain 168 263 9.8E-8 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RB11510 b5f7437e5645ca4aa7ab83ebf4dfd7d1 266 Gene3D G3DSA:2.40.30.100 16 83 1.6E-5 T 11-11-2016 RB11510 b5f7437e5645ca4aa7ab83ebf4dfd7d1 266 Pfam PF08922 Domain of unknown function (DUF1905) 18 83 4.6E-9 T 11-11-2016 IPR015018 Protein of unknown function DUF1905 RB11510 b5f7437e5645ca4aa7ab83ebf4dfd7d1 266 Gene3D G3DSA:2.40.50.140 160 265 2.8E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB11510 b5f7437e5645ca4aa7ab83ebf4dfd7d1 266 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 92 147 1.8E-15 T 11-11-2016 RB11510 b5f7437e5645ca4aa7ab83ebf4dfd7d1 266 SUPERFAMILY SSF141694 18 84 1.54E-6 T 11-11-2016 RB11510 b5f7437e5645ca4aa7ab83ebf4dfd7d1 266 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 160 265 9.1E-39 T 11-11-2016 IPR008231 Probable chaperone CsaA RB11510 b5f7437e5645ca4aa7ab83ebf4dfd7d1 266 SUPERFAMILY SSF50249 159 265 6.28E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8284 e68b39be3e8eed7f68178e3b05453fc6 330 SUPERFAMILY SSF64182 16 324 4.84E-55 T 11-11-2016 RB8284 e68b39be3e8eed7f68178e3b05453fc6 330 Pfam PF01368 DHH family 18 163 5.8E-9 T 11-11-2016 IPR001667 DDH domain RB8284 e68b39be3e8eed7f68178e3b05453fc6 330 Pfam PF02272 DHHA1 domain 264 317 2.3E-6 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RB8284 e68b39be3e8eed7f68178e3b05453fc6 330 Gene3D G3DSA:3.90.1640.10 17 201 5.5E-23 T 11-11-2016 RB684 fed5e2312e9a4406428c2735c7f2ca42 653 SUPERFAMILY SSF53649 26 494 4.94E-130 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB684 fed5e2312e9a4406428c2735c7f2ca42 653 Pfam PF00884 Sulfatase 28 395 2.5E-72 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB684 fed5e2312e9a4406428c2735c7f2ca42 653 ProSitePatterns PS00149 Sulfatases signature 2. 107 117 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB684 fed5e2312e9a4406428c2735c7f2ca42 653 Gene3D G3DSA:3.30.1120.10 429 505 6.0E-16 T 11-11-2016 RB684 fed5e2312e9a4406428c2735c7f2ca42 653 Gene3D G3DSA:3.40.720.10 25 421 3.9E-108 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9304 6701645e20d87fb01d8cafd8a5c15741 81 Pfam PF01197 Ribosomal protein L31 1 64 1.3E-31 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9304 6701645e20d87fb01d8cafd8a5c15741 81 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 29.579 T 11-11-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9304 6701645e20d87fb01d8cafd8a5c15741 81 PRINTS PR01249 Ribosomal protein L31 signature 30 45 8.8E-21 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9304 6701645e20d87fb01d8cafd8a5c15741 81 PRINTS PR01249 Ribosomal protein L31 signature 45 63 8.8E-21 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9304 6701645e20d87fb01d8cafd8a5c15741 81 PRINTS PR01249 Ribosomal protein L31 signature 2 19 8.8E-21 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9304 6701645e20d87fb01d8cafd8a5c15741 81 SUPERFAMILY SSF143800 1 64 1.61E-25 T 11-11-2016 RB9304 6701645e20d87fb01d8cafd8a5c15741 81 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 8.9E-32 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9304 6701645e20d87fb01d8cafd8a5c15741 81 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB9360 9d7aa94e4e6849d8e9c1eb7352f5f50d 510 Pfam PF01139 tRNA-splicing ligase RtcB 60 503 1.4E-93 T 11-11-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RB9360 9d7aa94e4e6849d8e9c1eb7352f5f50d 510 SUPERFAMILY SSF103365 36 503 3.66E-112 T 11-11-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 RB13132 efa35bebe8d4fdba9f9753eaca6599c4 479 SUPERFAMILY SSF53649 303 463 9.81E-21 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB13132 efa35bebe8d4fdba9f9753eaca6599c4 479 Gene3D G3DSA:3.40.720.10 348 455 2.7E-7 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB13132 efa35bebe8d4fdba9f9753eaca6599c4 479 Pfam PF07394 Protein of unknown function (DUF1501) 72 478 2.3E-155 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB6448 b012cf93c0575cab189e5da4567771b6 850 Gene3D G3DSA:3.40.50.410 779 806 1.3E-11 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6448 b012cf93c0575cab189e5da4567771b6 850 Gene3D G3DSA:3.40.50.410 108 275 1.3E-11 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6448 b012cf93c0575cab189e5da4567771b6 850 SUPERFAMILY SSF52317 390 651 1.01E-28 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB6448 b012cf93c0575cab189e5da4567771b6 850 Pfam PF00092 von Willebrand factor type A domain 112 280 3.4E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6448 b012cf93c0575cab189e5da4567771b6 850 SUPERFAMILY SSF53300 108 286 2.37E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6448 b012cf93c0575cab189e5da4567771b6 850 Gene3D G3DSA:3.40.50.880 389 655 1.1E-29 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 SUPERFAMILY SSF48452 61 355 2.45E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 Pfam PF07593 ASPIC and UnbV 931 997 9.1E-13 T 11-11-2016 IPR011519 ASPIC/UnbV RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 Gene3D G3DSA:2.130.10.130 499 684 4.7E-24 T 11-11-2016 RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 Gene3D G3DSA:2.130.10.130 753 909 4.7E-24 T 11-11-2016 RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 569 629 2.7E-14 T 11-11-2016 RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 765 831 4.9E-6 T 11-11-2016 RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 Gene3D G3DSA:1.25.40.10 55 266 6.2E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 Gene3D G3DSA:1.25.40.10 309 397 6.2E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3382 3865730ef0c0d3528d0c5614c76d9c5e 1014 SUPERFAMILY SSF69318 499 909 5.89E-55 T 11-11-2016 RB2265 d858b436c1f1711619eded5bb5cc1794 331 Gene3D G3DSA:3.40.50.1820 89 326 1.0E-56 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2265 d858b436c1f1711619eded5bb5cc1794 331 SUPERFAMILY SSF53474 63 327 2.58E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2265 d858b436c1f1711619eded5bb5cc1794 331 Pfam PF07859 alpha/beta hydrolase fold 113 228 8.1E-17 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB838 279781c871650fef0f1bd3137c5d3f36 253 SUPERFAMILY SSF48498 94 200 4.97E-16 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RB838 279781c871650fef0f1bd3137c5d3f36 253 Gene3D G3DSA:1.10.10.60 27 67 9.4E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB838 279781c871650fef0f1bd3137c5d3f36 253 SUPERFAMILY SSF46689 25 91 1.39E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB838 279781c871650fef0f1bd3137c5d3f36 253 ProSitePatterns PS01081 TetR-type HTH domain signature. 42 72 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RB838 279781c871650fef0f1bd3137c5d3f36 253 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 76 4.0E-12 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB838 279781c871650fef0f1bd3137c5d3f36 253 Gene3D G3DSA:1.10.357.10 68 207 1.7E-28 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RB838 279781c871650fef0f1bd3137c5d3f36 253 Pfam PF09209 Domain of unknown function (DUF1956) 98 226 1.4E-31 T 11-11-2016 IPR015292 Transcription regulator YbiH, C-terminal RB342 76f7136e727b7118a467633135c33455 190 SUPERFAMILY SSF54534 78 190 1.49E-38 T 11-11-2016 RB342 76f7136e727b7118a467633135c33455 190 Gene3D G3DSA:3.10.50.40 81 189 5.9E-38 T 11-11-2016 RB342 76f7136e727b7118a467633135c33455 190 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 99 186 3.3E-20 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 Pfam PF00067 Cytochrome P450 97 489 2.2E-36 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 PRINTS PR00463 E-class P450 group I signature 451 461 5.2E-8 T 11-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 PRINTS PR00463 E-class P450 group I signature 461 484 5.2E-8 T 11-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 PRINTS PR00463 E-class P450 group I signature 324 350 5.2E-8 T 11-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 Gene3D G3DSA:1.10.630.10 91 512 1.7E-57 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 454 463 - T 11-11-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 PRINTS PR00385 P450 superfamily signature 315 332 2.2E-6 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 PRINTS PR00385 P450 superfamily signature 364 375 2.2E-6 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 PRINTS PR00385 P450 superfamily signature 461 472 2.2E-6 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 PRINTS PR00385 P450 superfamily signature 452 461 2.2E-6 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB11252 361c7e8277253ed88e31f47f8f9bc650 514 SUPERFAMILY SSF48264 90 512 4.85E-56 T 11-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RB10307 81def1fcad7311ea76e226e7ab9384d3 349 SUPERFAMILY SSF53383 3 348 1.06E-89 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB10307 81def1fcad7311ea76e226e7ab9384d3 349 Gene3D G3DSA:3.90.1150.10 253 348 1.4E-23 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB10307 81def1fcad7311ea76e226e7ab9384d3 349 Pfam PF01212 Beta-eliminating lyase 3 294 1.9E-55 T 11-11-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 RB10307 81def1fcad7311ea76e226e7ab9384d3 349 Gene3D G3DSA:3.40.640.10 3 249 6.0E-51 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB10307 81def1fcad7311ea76e226e7ab9384d3 349 PIRSF PIRSF038940 1 348 3.9E-144 T 11-11-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 RB7123 49d20fd8d55c5fe1be53db9893980eb2 147 SUPERFAMILY SSF52172 11 124 4.13E-25 T 11-11-2016 IPR011006 CheY-like superfamily RB7123 49d20fd8d55c5fe1be53db9893980eb2 147 Pfam PF00072 Response regulator receiver domain 14 124 1.1E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7123 49d20fd8d55c5fe1be53db9893980eb2 147 Gene3D G3DSA:3.40.50.2300 9 139 9.7E-27 T 11-11-2016 RB7123 49d20fd8d55c5fe1be53db9893980eb2 147 SMART SM00448 12 137 4.0E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB3309 844874c3e746a00e30750906cbbbd4ea 684 Pfam PF00884 Sulfatase 34 407 9.1E-60 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3309 844874c3e746a00e30750906cbbbd4ea 684 Gene3D G3DSA:3.40.720.10 31 426 5.6E-96 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3309 844874c3e746a00e30750906cbbbd4ea 684 ProSitePatterns PS00523 Sulfatases signature 1. 86 98 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB3309 844874c3e746a00e30750906cbbbd4ea 684 Gene3D G3DSA:3.30.1120.10 450 514 2.3E-9 T 11-11-2016 RB3309 844874c3e746a00e30750906cbbbd4ea 684 SUPERFAMILY SSF53649 33 520 1.7E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3309 844874c3e746a00e30750906cbbbd4ea 684 Gene3D G3DSA:3.90.182.10 588 658 2.1E-5 T 11-11-2016 IPR011658 PA14 domain RB12445 02aaf0b736812564c12baa4a702aa54a 245 Gene3D G3DSA:3.40.50.300 48 241 4.6E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12445 02aaf0b736812564c12baa4a702aa54a 245 Pfam PF02223 Thymidylate kinase 53 239 9.5E-43 T 11-11-2016 RB12445 02aaf0b736812564c12baa4a702aa54a 245 Hamap MF_00165 Thymidylate kinase [tmk]. 49 243 23.373 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RB12445 02aaf0b736812564c12baa4a702aa54a 245 SUPERFAMILY SSF52540 48 240 8.09E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12445 02aaf0b736812564c12baa4a702aa54a 245 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 49 239 2.3E-45 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RB13131 dd8293610f34f010859b5d1b7ea11cfb 600 Gene3D G3DSA:2.130.10.130 106 140 4.1E-24 T 11-11-2016 RB13131 dd8293610f34f010859b5d1b7ea11cfb 600 Gene3D G3DSA:2.130.10.130 184 401 4.1E-24 T 11-11-2016 RB13131 dd8293610f34f010859b5d1b7ea11cfb 600 SUPERFAMILY SSF69318 40 406 1.44E-49 T 11-11-2016 RB13131 dd8293610f34f010859b5d1b7ea11cfb 600 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 106 169 6.7E-7 T 11-11-2016 RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 SUPERFAMILY SSF52266 272 303 1.98E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 SUPERFAMILY SSF52266 117 198 1.98E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 SUPERFAMILY SSF52266 342 417 1.98E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 Gene3D G3DSA:3.40.50.1110 103 201 6.4E-14 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 Gene3D G3DSA:3.40.50.1110 275 309 6.4E-14 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 Gene3D G3DSA:3.40.50.1110 352 413 6.4E-14 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 Pfam PF14559 Tetratricopeptide repeat 607 665 7.5E-9 T 11-11-2016 RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 SMART SM00028 627 660 0.023 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 SMART SM00028 593 626 6.1 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 SMART SM00028 487 520 11.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 SUPERFAMILY SSF48452 451 670 6.54E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 Gene3D G3DSA:1.25.40.10 457 666 9.9E-35 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2086 45645fb7ba9d6aa4260d490e257deb8f 678 Gene3D G3DSA:1.25.40.10 310 351 9.9E-35 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4694 b72a6f9fe0c9a61b832d944e2e641596 411 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4694 b72a6f9fe0c9a61b832d944e2e641596 411 Pfam PF07596 Protein of unknown function (DUF1559) 36 365 9.4E-64 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB4694 b72a6f9fe0c9a61b832d944e2e641596 411 Pfam PF13633 Prokaryotic N-terminal methylation site 9 35 5.6E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4694 b72a6f9fe0c9a61b832d944e2e641596 411 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 6.6E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4694 b72a6f9fe0c9a61b832d944e2e641596 411 SUPERFAMILY SSF54523 12 169 2.43E-28 T 11-11-2016 RB4694 b72a6f9fe0c9a61b832d944e2e641596 411 Gene3D G3DSA:3.30.700.10 12 80 8.8E-8 T 11-11-2016 RB5841 52f87e40142288e4e6035c33d466c772 670 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 476 617 1.4E-25 T 11-11-2016 RB5841 52f87e40142288e4e6035c33d466c772 670 Gene3D G3DSA:2.60.120.200 463 617 1.5E-23 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5841 52f87e40142288e4e6035c33d466c772 670 SUPERFAMILY SSF56300 66 315 6.42E-41 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5841 52f87e40142288e4e6035c33d466c772 670 SMART SM00560 490 621 1.2E-6 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB5841 52f87e40142288e4e6035c33d466c772 670 Gene3D G3DSA:3.60.21.10 63 313 5.3E-38 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5841 52f87e40142288e4e6035c33d466c772 670 SUPERFAMILY SSF49899 460 616 1.09E-24 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5841 52f87e40142288e4e6035c33d466c772 670 Pfam PF00149 Calcineurin-like phosphoesterase 82 268 1.0E-13 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB7634 0f100e295a3348550fa8666d6283e578 773 Pfam PF12679 ABC-2 family transporter protein 26 441 8.9E-23 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 RB7634 0f100e295a3348550fa8666d6283e578 773 Pfam PF02517 CAAX protease self-immunity 602 686 1.5E-16 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 RB6056 6fc5230bc7f89747a7f096532a744dc5 367 SUPERFAMILY SSF52540 40 333 7.03E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6056 6fc5230bc7f89747a7f096532a744dc5 367 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 75 208 9.5E-66 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB6056 6fc5230bc7f89747a7f096532a744dc5 367 Gene3D G3DSA:1.10.8.300 239 354 3.6E-32 T 11-11-2016 RB6056 6fc5230bc7f89747a7f096532a744dc5 367 PIRSF PIRSF002849 13 360 1.1E-128 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB6056 6fc5230bc7f89747a7f096532a744dc5 367 Gene3D G3DSA:3.40.50.300 57 224 6.8E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2115 8e0a19333d74f3bbef6d20ad76599581 514 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 288 301 - T 11-11-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 RB2115 8e0a19333d74f3bbef6d20ad76599581 514 SUPERFAMILY SSF53335 213 486 2.15E-64 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2115 8e0a19333d74f3bbef6d20ad76599581 514 Gene3D G3DSA:3.40.50.150 265 511 5.8E-63 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2115 8e0a19333d74f3bbef6d20ad76599581 514 Pfam PF01564 Spermine/spermidine synthase 232 441 2.5E-35 T 11-11-2016 RB2115 8e0a19333d74f3bbef6d20ad76599581 514 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 220 502 23.946 T 11-11-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 RB11991 5d79b1a0cb3a32683410d3427d2475b4 305 Gene3D G3DSA:3.40.800.20 4 283 2.2E-62 T 11-11-2016 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RB11991 5d79b1a0cb3a32683410d3427d2475b4 305 Pfam PF00850 Histone deacetylase domain 24 283 3.6E-49 T 11-11-2016 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RB11991 5d79b1a0cb3a32683410d3427d2475b4 305 SUPERFAMILY SSF52768 3 284 4.03E-79 T 11-11-2016 RB11991 5d79b1a0cb3a32683410d3427d2475b4 305 PRINTS PR01270 Histone deacetylase superfamily signature 115 138 5.6E-12 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RB11991 5d79b1a0cb3a32683410d3427d2475b4 305 PRINTS PR01270 Histone deacetylase superfamily signature 227 237 5.6E-12 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RB11991 5d79b1a0cb3a32683410d3427d2475b4 305 PRINTS PR01270 Histone deacetylase superfamily signature 149 164 5.6E-12 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RB183 43d86d05c91bc5c07e31772c034227ba 594 SUPERFAMILY SSF56954 163 584 1.57E-46 T 11-11-2016 RB183 43d86d05c91bc5c07e31772c034227ba 594 Pfam PF02321 Outer membrane efflux protein 397 580 1.6E-21 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB183 43d86d05c91bc5c07e31772c034227ba 594 Gene3D G3DSA:1.20.1600.10 163 582 1.0E-42 T 11-11-2016 RB12024 eb4525469a381c07cbf8f369318b77fe 1047 Pfam PF07627 Protein of unknown function (DUF1588) 838 936 1.9E-28 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB12024 eb4525469a381c07cbf8f369318b77fe 1047 Pfam PF07637 Protein of unknown function (DUF1595) 601 658 4.3E-18 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB12024 eb4525469a381c07cbf8f369318b77fe 1047 Pfam PF07626 Protein of unknown function (DUF1587) 155 218 3.4E-22 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB12024 eb4525469a381c07cbf8f369318b77fe 1047 Gene3D G3DSA:1.10.760.10 33 138 8.9E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12024 eb4525469a381c07cbf8f369318b77fe 1047 SUPERFAMILY SSF46626 36 138 3.41E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12024 eb4525469a381c07cbf8f369318b77fe 1047 Pfam PF07631 Protein of unknown function (DUF1592) 681 809 9.3E-43 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB12024 eb4525469a381c07cbf8f369318b77fe 1047 Pfam PF07624 Protein of unknown function (DUF1585) 951 1025 4.2E-21 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 Pfam PF01966 HD domain 163 252 5.6E-10 T 11-11-2016 IPR006674 HD domain RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 SUPERFAMILY SSF109604 136 323 1.64E-29 T 11-11-2016 RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 Pfam PF08448 PAS fold 389 497 3.6E-7 T 11-11-2016 IPR013656 PAS fold-4 RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 Gene3D G3DSA:3.30.450.20 384 508 1.9E-13 T 11-11-2016 RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 Pfam PF00990 Diguanylate cyclase, GGDEF domain 511 666 8.0E-41 T 11-11-2016 IPR000160 GGDEF domain RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 Gene3D G3DSA:3.30.70.270 513 669 6.3E-49 T 11-11-2016 RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 SMART SM00471 158 293 2.5E-9 T 11-11-2016 IPR003607 HD/PDEase domain RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 SMART SM00267 500 670 2.6E-52 T 11-11-2016 IPR000160 GGDEF domain RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 507 668 6.4E-43 T 11-11-2016 IPR000160 GGDEF domain RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 SUPERFAMILY SSF55073 516 669 1.96E-43 T 11-11-2016 IPR029787 Nucleotide cyclase RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 SUPERFAMILY SSF55785 383 494 7.68E-10 T 11-11-2016 IPR000014 PAS domain RB5964 590c66bf12879a6ce2d6eeab6a3771d4 824 Gene3D G3DSA:1.10.3210.10 160 333 1.2E-14 T 11-11-2016 IPR006674 HD domain RB10939 32c964bccb4e3247ec424da4b3394e34 62 Gene3D G3DSA:2.60.120.10 2 52 4.7E-10 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB10939 32c964bccb4e3247ec424da4b3394e34 62 SUPERFAMILY SSF51182 2 52 1.01E-11 T 11-11-2016 IPR011051 RmlC-like cupin domain RB10939 32c964bccb4e3247ec424da4b3394e34 62 Pfam PF07883 Cupin domain 3 41 1.6E-7 T 11-11-2016 IPR013096 Cupin 2, conserved barrel RB11529 9662c5f5d8a3fe03dbada585e72da7f6 254 Gene3D G3DSA:3.90.550.10 41 219 1.6E-12 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11529 9662c5f5d8a3fe03dbada585e72da7f6 254 Pfam PF00535 Glycosyl transferase family 2 27 154 4.6E-13 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB11529 9662c5f5d8a3fe03dbada585e72da7f6 254 SUPERFAMILY SSF53448 11 243 3.78E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5945 a7a4c4c5d088f47d84ffb155f53c4307 282 SUPERFAMILY SSF53474 43 251 2.78E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5945 a7a4c4c5d088f47d84ffb155f53c4307 282 Pfam PF02230 Phospholipase/Carboxylesterase 101 198 1.5E-9 T 11-11-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 RB5945 a7a4c4c5d088f47d84ffb155f53c4307 282 Gene3D G3DSA:3.40.50.1820 50 249 7.8E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2471 fdf05815dcc67989eb2577e5605e7c6f 436 Gene3D G3DSA:3.40.50.2000 218 363 7.1E-13 T 11-11-2016 RB2471 fdf05815dcc67989eb2577e5605e7c6f 436 SUPERFAMILY SSF53756 45 421 2.3E-55 T 11-11-2016 RB2471 fdf05815dcc67989eb2577e5605e7c6f 436 Pfam PF00534 Glycosyl transferases group 1 240 395 1.9E-23 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB2471 fdf05815dcc67989eb2577e5605e7c6f 436 Pfam PF13579 Glycosyl transferase 4-like domain 58 221 7.2E-12 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB8595 dcd0230efe4045aa31883f1bf06579aa 534 Pfam PF10150 Ribonuclease E/G family 157 427 2.1E-98 T 11-11-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RB8595 dcd0230efe4045aa31883f1bf06579aa 534 SUPERFAMILY SSF50249 117 161 1.14E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8595 dcd0230efe4045aa31883f1bf06579aa 534 SUPERFAMILY SSF50249 40 81 1.14E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8595 dcd0230efe4045aa31883f1bf06579aa 534 Pfam PF00575 S1 RNA binding domain 40 142 2.2E-5 T 11-11-2016 IPR003029 S1 domain GO:0003676 RB8595 dcd0230efe4045aa31883f1bf06579aa 534 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 15 460 4.2E-150 T 11-11-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RB8595 dcd0230efe4045aa31883f1bf06579aa 534 Gene3D G3DSA:2.40.50.140 119 161 7.6E-36 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8595 dcd0230efe4045aa31883f1bf06579aa 534 Gene3D G3DSA:2.40.50.140 31 83 7.6E-36 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB8595 dcd0230efe4045aa31883f1bf06579aa 534 SMART SM00316 38 155 6.4E-9 T 11-11-2016 IPR022967 RNA-binding domain, S1 RB5560 96432cd93e8e9a5f43253cf00749b040 293 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 23 263 1.4E-69 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RB5560 96432cd93e8e9a5f43253cf00749b040 293 SUPERFAMILY SSF51366 16 264 2.17E-76 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB5560 96432cd93e8e9a5f43253cf00749b040 293 Gene3D G3DSA:3.20.20.70 16 291 1.8E-84 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB5560 96432cd93e8e9a5f43253cf00749b040 293 Pfam PF00290 Tryptophan synthase alpha chain 23 267 3.8E-72 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RB5560 96432cd93e8e9a5f43253cf00749b040 293 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 29 289 30.957 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 Gene3D G3DSA:1.25.40.10 113 307 1.8E-33 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 Pfam PF13431 Tetratricopeptide repeat 170 201 1.4E-4 T 11-11-2016 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 Pfam PF13428 Tetratricopeptide repeat 219 259 1.9E-7 T 11-11-2016 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 Pfam PF13414 TPR repeat 114 155 9.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 SMART SM00028 216 249 0.37 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 SMART SM00028 141 181 78.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 SMART SM00028 107 140 0.0039 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 SMART SM00028 250 283 0.64 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10541 2bfe86d0ca0a42fd5c320cd59b586352 329 SUPERFAMILY SSF48452 111 280 7.59E-29 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1446 82fea4c66a0e993bc8ef01f9a40b8085 260 Gene3D G3DSA:1.25.40.10 15 237 2.2E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1446 82fea4c66a0e993bc8ef01f9a40b8085 260 SUPERFAMILY SSF48452 46 200 1.04E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11411 8973357c174b681be2523b2ba2be6d20 351 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 229 4.1E-7 T 11-11-2016 RB11411 8973357c174b681be2523b2ba2be6d20 351 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 237 251 4.1E-7 T 11-11-2016 RB11411 8973357c174b681be2523b2ba2be6d20 351 Pfam PF12161 HsdM N-terminal domain 8 173 4.4E-15 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RB11411 8973357c174b681be2523b2ba2be6d20 351 SUPERFAMILY SSF53335 8 47 9.8E-61 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11411 8973357c174b681be2523b2ba2be6d20 351 SUPERFAMILY SSF53335 105 346 9.8E-61 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11411 8973357c174b681be2523b2ba2be6d20 351 Gene3D G3DSA:3.40.50.150 295 346 3.6E-17 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11411 8973357c174b681be2523b2ba2be6d20 351 Gene3D G3DSA:3.40.50.150 216 257 3.6E-17 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11411 8973357c174b681be2523b2ba2be6d20 351 Pfam PF02384 N-6 DNA Methylase 192 346 4.8E-29 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RB12383 cc202315d89635f19c5a9b4a541c36d0 88 SUPERFAMILY SSF158997 4 21 5.62E-10 T 11-11-2016 RB12383 cc202315d89635f19c5a9b4a541c36d0 88 SUPERFAMILY SSF158997 49 80 5.62E-10 T 11-11-2016 RB12383 cc202315d89635f19c5a9b4a541c36d0 88 Gene3D G3DSA:2.20.25.10 9 79 5.0E-9 T 11-11-2016 RB12383 cc202315d89635f19c5a9b4a541c36d0 88 Pfam PF03966 Trm112p-like protein 5 69 6.1E-8 T 11-11-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 Gene3D G3DSA:3.30.565.10 265 439 3.6E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 435 7.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 279 4.4E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 SMART SM00091 97 165 1.9E-5 T 11-11-2016 IPR000014 PAS domain RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 103 212 2.1E-8 T 11-11-2016 IPR000014 PAS domain RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 SUPERFAMILY SSF47384 201 279 1.61E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 SUPERFAMILY SSF55874 269 436 2.62E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 SMART SM00387 325 437 1.3E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 SUPERFAMILY SSF55785 108 214 3.32E-9 T 11-11-2016 IPR000014 PAS domain RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 Gene3D G3DSA:1.10.287.130 206 264 4.8E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 Gene3D G3DSA:3.30.450.20 92 205 1.2E-11 T 11-11-2016 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 2.5E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 2.5E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 2.5E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 2.5E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 Pfam PF08448 PAS fold 105 208 3.8E-7 T 11-11-2016 IPR013656 PAS fold-4 RB7410 524e281a6c7c1ab6bb57598ce363faa7 445 SMART SM00388 212 279 8.1E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB5730 4ff958caa70f58cd42e379917747ee2a 316 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 21 271 1.0E-69 T 11-11-2016 IPR005232 Conserved hypothetical protein CHP00268 RB5730 4ff958caa70f58cd42e379917747ee2a 316 Gene3D G3DSA:3.40.50.620 25 179 1.9E-28 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB5730 4ff958caa70f58cd42e379917747ee2a 316 PIRSF PIRSF006661 11 300 1.3E-107 T 11-11-2016 IPR005232 Conserved hypothetical protein CHP00268 RB5730 4ff958caa70f58cd42e379917747ee2a 316 Pfam PF00733 Asparagine synthase 16 93 1.9E-8 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RB5730 4ff958caa70f58cd42e379917747ee2a 316 SUPERFAMILY SSF52402 26 215 1.46E-32 T 11-11-2016 RB13312 273b26728f594d24847b16bd8cadc0c0 421 Pfam PF13633 Prokaryotic N-terminal methylation site 17 42 2.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13312 273b26728f594d24847b16bd8cadc0c0 421 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13312 273b26728f594d24847b16bd8cadc0c0 421 SUPERFAMILY SSF54523 19 169 7.85E-28 T 11-11-2016 RB13312 273b26728f594d24847b16bd8cadc0c0 421 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 6.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13312 273b26728f594d24847b16bd8cadc0c0 421 Pfam PF07596 Protein of unknown function (DUF1559) 43 379 1.0E-63 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB13312 273b26728f594d24847b16bd8cadc0c0 421 Gene3D G3DSA:3.30.700.10 19 82 2.4E-7 T 11-11-2016 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 216 1.7E-62 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 SUPERFAMILY SSF46934 3 55 3.01E-17 T 11-11-2016 IPR009060 UBA-like GO:0005515 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 Gene3D G3DSA:1.10.8.10 3 55 2.6E-24 T 11-11-2016 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 Hamap MF_00050 Elongation factor Ts [tsf]. 1 326 51.872 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 SUPERFAMILY SSF54713 177 218 9.05E-19 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 SUPERFAMILY SSF54713 57 92 9.05E-19 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 SUPERFAMILY SSF54713 141 193 5.1E-16 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 SUPERFAMILY SSF54713 271 325 5.1E-16 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 Gene3D G3DSA:3.30.479.20 57 145 1.6E-13 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 Gene3D G3DSA:3.30.479.20 288 325 4.9E-22 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 Gene3D G3DSA:3.30.479.20 149 189 4.9E-22 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 Pfam PF00889 Elongation factor TS 72 220 2.0E-41 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 Pfam PF00889 Elongation factor TS 232 325 3.4E-20 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB10640 4bc0cbe2f202e722e350ccc7dfe7b3ca 326 Gene3D G3DSA:1.10.286.20 240 282 1.6E-8 T 11-11-2016 RB8287 6b2bfbea7d0cd7919ac54f2e991731fb 304 Gene3D G3DSA:3.40.1190.20 16 295 5.8E-71 T 11-11-2016 IPR029056 Ribokinase-like RB8287 6b2bfbea7d0cd7919ac54f2e991731fb 304 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 236 246 - T 11-11-2016 IPR017953 Carbohydrate kinase, predicted, conserved site RB8287 6b2bfbea7d0cd7919ac54f2e991731fb 304 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 8 304 21.937 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RB8287 6b2bfbea7d0cd7919ac54f2e991731fb 304 Pfam PF01256 Carbohydrate kinase 31 292 8.5E-46 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RB8287 6b2bfbea7d0cd7919ac54f2e991731fb 304 SUPERFAMILY SSF53613 15 298 3.27E-64 T 11-11-2016 IPR029056 Ribokinase-like RB8287 6b2bfbea7d0cd7919ac54f2e991731fb 304 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 15 294 1.1E-61 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RB10612 c1f50b00ea6f7474e2d0ddc22311da36 492 SUPERFAMILY SSF53649 42 487 2.49E-104 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10612 c1f50b00ea6f7474e2d0ddc22311da36 492 Gene3D G3DSA:3.40.720.10 41 421 1.5E-86 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB10612 c1f50b00ea6f7474e2d0ddc22311da36 492 Pfam PF00884 Sulfatase 44 402 2.1E-55 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10612 c1f50b00ea6f7474e2d0ddc22311da36 492 Gene3D G3DSA:3.30.1120.10 431 488 2.6E-12 T 11-11-2016 RB12174 8d4741fa9933d96103e8765897f5cb06 379 Pfam PF02119 Flagellar P-ring protein 34 321 8.1E-53 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RB12174 8d4741fa9933d96103e8765897f5cb06 379 PRINTS PR01010 Flagellar P-ring protein signature 101 120 2.0E-18 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RB12174 8d4741fa9933d96103e8765897f5cb06 379 PRINTS PR01010 Flagellar P-ring protein signature 123 140 2.0E-18 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RB12174 8d4741fa9933d96103e8765897f5cb06 379 PRINTS PR01010 Flagellar P-ring protein signature 34 49 2.0E-18 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RB12174 8d4741fa9933d96103e8765897f5cb06 379 PRINTS PR01010 Flagellar P-ring protein signature 49 64 2.0E-18 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RB12174 8d4741fa9933d96103e8765897f5cb06 379 PRINTS PR01010 Flagellar P-ring protein signature 289 301 2.0E-18 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RB544 95f4c2a9a716e62ab1ad975f021d0f4d 915 Pfam PF07587 Protein of unknown function (DUF1553) 639 892 6.5E-90 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB544 95f4c2a9a716e62ab1ad975f021d0f4d 915 Pfam PF07583 Protein of unknown function (DUF1549) 153 357 3.6E-79 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB544 95f4c2a9a716e62ab1ad975f021d0f4d 915 Gene3D G3DSA:1.10.760.10 39 119 2.1E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB544 95f4c2a9a716e62ab1ad975f021d0f4d 915 Pfam PF07635 Planctomycete cytochrome C 45 104 1.3E-19 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB544 95f4c2a9a716e62ab1ad975f021d0f4d 915 SUPERFAMILY SSF46626 18 123 6.5E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB544 95f4c2a9a716e62ab1ad975f021d0f4d 915 Gene3D G3DSA:2.60.120.260 472 551 5.7E-5 T 11-11-2016 IPR008979 Galactose-binding domain-like RB8320 0a5d97719bfaf2f52bd40db2256d3f4f 464 SMART SM00382 241 377 1.6E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB8320 0a5d97719bfaf2f52bd40db2256d3f4f 464 Gene3D G3DSA:3.40.50.300 240 436 9.5E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8320 0a5d97719bfaf2f52bd40db2256d3f4f 464 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 329 2.1E-66 T 11-11-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 RB8320 0a5d97719bfaf2f52bd40db2256d3f4f 464 Pfam PF00448 SRP54-type protein, GTPase domain 243 436 5.8E-36 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB8320 0a5d97719bfaf2f52bd40db2256d3f4f 464 SMART SM00962 242 437 5.4E-49 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RB8320 0a5d97719bfaf2f52bd40db2256d3f4f 464 SUPERFAMILY SSF52540 239 435 1.95E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12783 85b7d2b0bee835ffe5b9a7873879f4a4 435 PRINTS PR00813 Bacterial general secretion pathway protein G signature 20 45 3.5E-7 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RB12783 85b7d2b0bee835ffe5b9a7873879f4a4 435 PRINTS PR00813 Bacterial general secretion pathway protein G signature 56 74 3.5E-7 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RB12783 85b7d2b0bee835ffe5b9a7873879f4a4 435 SUPERFAMILY SSF54523 21 159 2.98E-16 T 11-11-2016 RB12783 85b7d2b0bee835ffe5b9a7873879f4a4 435 Pfam PF13633 Prokaryotic N-terminal methylation site 19 43 3.1E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB12783 85b7d2b0bee835ffe5b9a7873879f4a4 435 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 40 1.1E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB12783 85b7d2b0bee835ffe5b9a7873879f4a4 435 Gene3D G3DSA:3.30.700.10 21 89 3.5E-8 T 11-11-2016 RB4267 772254f77616cec0f1734f3788913829 210 SUPERFAMILY SSF51069 2 209 1.7E-51 T 11-11-2016 IPR001148 Alpha carbonic anhydrase RB4267 772254f77616cec0f1734f3788913829 210 Gene3D G3DSA:3.10.200.10 2 209 4.5E-46 T 11-11-2016 IPR001148 Alpha carbonic anhydrase RB4267 772254f77616cec0f1734f3788913829 210 SMART SM01057 2 209 1.8E-35 T 11-11-2016 IPR001148 Alpha carbonic anhydrase RB4267 772254f77616cec0f1734f3788913829 210 Pfam PF00194 Eukaryotic-type carbonic anhydrase 2 206 1.1E-34 T 11-11-2016 IPR001148 Alpha carbonic anhydrase RB4267 772254f77616cec0f1734f3788913829 210 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 72 88 - T 11-11-2016 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Gene3D G3DSA:3.90.10.10 329 353 7.9E-7 T 11-11-2016 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Gene3D G3DSA:3.90.10.10 190 212 7.9E-7 T 11-11-2016 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Pfam PF00034 Cytochrome c 208 316 7.6E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Pfam PF00034 Cytochrome c 103 182 4.3E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF46626 201 224 2.36E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF46626 263 317 2.36E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF46626 535 628 7.48E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Gene3D G3DSA:3.90.10.10 354 380 7.1E-4 T 11-11-2016 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Gene3D G3DSA:1.10.760.10 99 181 6.8E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Gene3D G3DSA:1.10.760.10 213 315 6.2E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Gene3D G3DSA:1.10.760.10 535 628 3.9E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 Gene3D G3DSA:1.10.760.10 429 527 1.6E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF48695 217 239 3.31E-9 T 11-11-2016 IPR011031 Multihaem cytochrome RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF48695 431 439 3.31E-9 T 11-11-2016 IPR011031 Multihaem cytochrome RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF48695 543 554 3.31E-9 T 11-11-2016 IPR011031 Multihaem cytochrome RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF48695 107 150 3.31E-9 T 11-11-2016 IPR011031 Multihaem cytochrome RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF48695 350 389 3.31E-9 T 11-11-2016 IPR011031 Multihaem cytochrome RB3953 bd8d792eed04cb6ee71ac5e320330388 857 SUPERFAMILY SSF46626 428 505 1.94E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB10036 9e5e48ac1569cd8b6f7b42b1b7a566e9 277 Pfam PF02585 GlcNAc-PI de-N-acetylase 53 169 4.4E-18 T 11-11-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RB10036 9e5e48ac1569cd8b6f7b42b1b7a566e9 277 Gene3D G3DSA:3.40.50.10320 49 273 6.1E-48 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB10036 9e5e48ac1569cd8b6f7b42b1b7a566e9 277 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 50 269 3.6E-56 T 11-11-2016 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 RB10036 9e5e48ac1569cd8b6f7b42b1b7a566e9 277 SUPERFAMILY SSF102588 50 272 5.23E-51 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB2253 271e39aef9f8c93edf8c80443e499ba5 237 Pfam PF02629 CoA binding domain 112 207 2.7E-19 T 11-11-2016 IPR003781 CoA-binding GO:0048037 RB2253 271e39aef9f8c93edf8c80443e499ba5 237 SUPERFAMILY SSF46785 39 108 7.39E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2253 271e39aef9f8c93edf8c80443e499ba5 237 SMART SM00881 108 209 1.2E-13 T 11-11-2016 IPR003781 CoA-binding GO:0048037 RB2253 271e39aef9f8c93edf8c80443e499ba5 237 SUPERFAMILY SSF51735 113 234 6.56E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2253 271e39aef9f8c93edf8c80443e499ba5 237 Gene3D G3DSA:3.40.50.720 107 236 3.2E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2253 271e39aef9f8c93edf8c80443e499ba5 237 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 30 237 32.771 T 11-11-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 RB2253 271e39aef9f8c93edf8c80443e499ba5 237 Gene3D G3DSA:1.10.10.10 34 103 1.3E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2253 271e39aef9f8c93edf8c80443e499ba5 237 Pfam PF06971 Putative DNA-binding protein N-terminus 35 82 1.1E-11 T 11-11-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 RB9174 bfff00e32ad424ba2435d800fda3c7b5 321 Pfam PF13633 Prokaryotic N-terminal methylation site 13 38 1.2E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB9174 bfff00e32ad424ba2435d800fda3c7b5 321 SUPERFAMILY SSF54523 15 105 6.67E-19 T 11-11-2016 RB9174 bfff00e32ad424ba2435d800fda3c7b5 321 Gene3D G3DSA:3.30.700.10 15 64 1.8E-7 T 11-11-2016 RB9174 bfff00e32ad424ba2435d800fda3c7b5 321 Pfam PF07596 Protein of unknown function (DUF1559) 39 301 2.1E-54 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB9174 bfff00e32ad424ba2435d800fda3c7b5 321 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB9174 bfff00e32ad424ba2435d800fda3c7b5 321 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 4.1E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7991 056698bbc62faccad154934200c3fb00 493 Gene3D G3DSA:3.40.720.10 344 478 6.1E-9 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7991 056698bbc62faccad154934200c3fb00 493 Pfam PF07394 Protein of unknown function (DUF1501) 69 492 1.7E-156 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB7991 056698bbc62faccad154934200c3fb00 493 SUPERFAMILY SSF53649 317 476 1.11E-22 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6370 8ed9ab3f2e49555366184fc22cc37beb 500 SUPERFAMILY SSF46689 444 499 1.4E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB6370 8ed9ab3f2e49555366184fc22cc37beb 500 Pfam PF02954 Bacterial regulatory protein, Fis family 465 498 3.8E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB6370 8ed9ab3f2e49555366184fc22cc37beb 500 Gene3D G3DSA:1.10.8.60 351 430 2.7E-10 T 11-11-2016 RB6370 8ed9ab3f2e49555366184fc22cc37beb 500 SUPERFAMILY SSF52540 177 429 5.31E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6370 8ed9ab3f2e49555366184fc22cc37beb 500 Gene3D G3DSA:1.10.10.60 440 498 1.0E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB6370 8ed9ab3f2e49555366184fc22cc37beb 500 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 484 500 2.0E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB6370 8ed9ab3f2e49555366184fc22cc37beb 500 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 484 2.0E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB3771 43f061e68fcea8eddf185a25d47de5be 222 SUPERFAMILY SSF102198 7 216 1.83E-53 T 11-11-2016 RB3771 43f061e68fcea8eddf185a25d47de5be 222 Pfam PF04199 Putative cyclase 11 155 5.2E-27 T 11-11-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734 RB3771 43f061e68fcea8eddf185a25d47de5be 222 Gene3D G3DSA:3.50.30.50 7 216 3.3E-56 T 11-11-2016 RB9852 8c641ea71adbd01766f614803654b055 223 Pfam PF08281 Sigma-70, region 4 153 204 1.7E-11 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9852 8c641ea71adbd01766f614803654b055 223 TIGRFAM TIGR02984 Sig-70_plancto1: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1 21 209 3.9E-73 T 11-11-2016 IPR014326 RNA polymerase sigma-70 factor, Planctomycetaceae RB9852 8c641ea71adbd01766f614803654b055 223 Pfam PF04542 Sigma-70 region 2 35 104 4.0E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9852 8c641ea71adbd01766f614803654b055 223 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 206 1.3E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9852 8c641ea71adbd01766f614803654b055 223 Gene3D G3DSA:1.10.10.10 147 210 2.5E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9852 8c641ea71adbd01766f614803654b055 223 Gene3D G3DSA:1.10.1740.10 12 127 6.6E-19 T 11-11-2016 RB9852 8c641ea71adbd01766f614803654b055 223 SUPERFAMILY SSF88946 10 110 2.55E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9852 8c641ea71adbd01766f614803654b055 223 SUPERFAMILY SSF88659 124 212 5.79E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2170 b0bc87c321aa334c6f94418a1c5cf0a2 493 Pfam PF07394 Protein of unknown function (DUF1501) 72 492 2.9E-152 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB2170 b0bc87c321aa334c6f94418a1c5cf0a2 493 Gene3D G3DSA:3.40.720.10 368 467 9.0E-5 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2170 b0bc87c321aa334c6f94418a1c5cf0a2 493 SUPERFAMILY SSF53649 309 468 3.05E-19 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2143 9886b74c1491da578160a8b6741ffab6 635 SUPERFAMILY SSF52518 246 383 1.06E-55 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB2143 9886b74c1491da578160a8b6741ffab6 635 SUPERFAMILY SSF52518 28 198 1.06E-55 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB2143 9886b74c1491da578160a8b6741ffab6 635 SMART SM00861 323 487 7.7E-51 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RB2143 9886b74c1491da578160a8b6741ffab6 635 SUPERFAMILY SSF52518 321 507 1.23E-50 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB2143 9886b74c1491da578160a8b6741ffab6 635 Gene3D G3DSA:3.40.50.970 301 497 1.2E-54 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB2143 9886b74c1491da578160a8b6741ffab6 635 Pfam PF02779 Transketolase, pyrimidine binding domain 325 483 9.8E-30 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RB2143 9886b74c1491da578160a8b6741ffab6 635 Gene3D G3DSA:3.40.50.970 242 300 7.0E-41 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB2143 9886b74c1491da578160a8b6741ffab6 635 Gene3D G3DSA:3.40.50.970 45 194 7.0E-41 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold RB2143 9886b74c1491da578160a8b6741ffab6 635 Gene3D G3DSA:3.40.50.920 498 624 7.5E-33 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RB2143 9886b74c1491da578160a8b6741ffab6 635 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 285 5.9E-91 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RB2143 9886b74c1491da578160a8b6741ffab6 635 Pfam PF02780 Transketolase, C-terminal domain 497 618 9.2E-27 T 11-11-2016 IPR033248 Transketolase, C-terminal domain RB2143 9886b74c1491da578160a8b6741ffab6 635 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 621 1.0E-191 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RB2143 9886b74c1491da578160a8b6741ffab6 635 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 8 627 37.397 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RB2143 9886b74c1491da578160a8b6741ffab6 635 SUPERFAMILY SSF52922 493 624 1.96E-31 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RB10905 498aea0bfccf13b00aad2b442bd98645 252 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 214 4.2E-26 T 11-11-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RB10905 498aea0bfccf13b00aad2b442bd98645 252 Gene3D G3DSA:3.60.21.10 3 252 1.7E-73 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10905 498aea0bfccf13b00aad2b442bd98645 252 PIRSF PIRSF000883 2 252 5.9E-57 T 11-11-2016 IPR011152 Phosphoesterase MJ0912 RB10905 498aea0bfccf13b00aad2b442bd98645 252 SUPERFAMILY SSF56300 3 252 4.78E-54 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB1342 8fb2996c652abfcc437dabc607144981 336 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 309 321 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 282 303 7.9E-61 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 184 7.9E-61 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 145 165 7.9E-61 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 281 7.9E-61 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 306 331 7.9E-61 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 126 145 7.9E-61 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 322 332 2.3E-15 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 254 266 2.3E-15 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 184 196 2.3E-15 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 124 133 2.3E-15 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 Pfam PF00813 FliP family 128 328 2.6E-70 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 RB1342 8fb2996c652abfcc437dabc607144981 336 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 128 332 1.3E-76 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 RB3259 961ef199f68371e6ec1190b1a5968616 61 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 58 1.9E-10 T 11-11-2016 IPR012933 HicA mRNA interferase family GO:0003729 RB3259 961ef199f68371e6ec1190b1a5968616 61 SUPERFAMILY SSF54786 1 59 3.06E-13 T 11-11-2016 RB3259 961ef199f68371e6ec1190b1a5968616 61 Gene3D G3DSA:3.30.920.30 1 58 2.0E-9 T 11-11-2016 RB9284 1e0bf03a6df99af2d8341ef059df2457 299 Pfam PF00494 Squalene/phytoene synthase 13 273 5.6E-63 T 11-11-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RB9284 1e0bf03a6df99af2d8341ef059df2457 299 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 12 285 5.0E-103 T 11-11-2016 IPR017827 Squalene synthase HpnC RB9284 1e0bf03a6df99af2d8341ef059df2457 299 Gene3D G3DSA:1.10.600.10 3 287 1.8E-56 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB9284 1e0bf03a6df99af2d8341ef059df2457 299 SUPERFAMILY SSF48576 4 288 9.11E-64 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB3330 e06fdbcc986bda854b7ed83449559fe3 451 Gene3D G3DSA:3.30.360.10 210 416 8.9E-32 T 11-11-2016 RB3330 e06fdbcc986bda854b7ed83449559fe3 451 Gene3D G3DSA:3.40.50.720 57 209 3.9E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3330 e06fdbcc986bda854b7ed83449559fe3 451 SUPERFAMILY SSF55347 205 384 9.37E-20 T 11-11-2016 RB3330 e06fdbcc986bda854b7ed83449559fe3 451 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 61 188 2.2E-12 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB3330 e06fdbcc986bda854b7ed83449559fe3 451 SUPERFAMILY SSF51735 43 228 1.77E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 261 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 Gene3D G3DSA:3.30.450.20 44 154 1.9E-11 T 11-11-2016 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 SMART SM00342 182 265 1.0E-23 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 Pfam PF08448 PAS fold 50 156 3.2E-15 T 11-11-2016 IPR013656 PAS fold-4 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 SUPERFAMILY SSF46689 219 267 3.67E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 Gene3D G3DSA:1.10.10.60 164 219 1.7E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 Gene3D G3DSA:1.10.10.60 220 269 2.8E-20 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 SUPERFAMILY SSF55785 45 154 6.63E-10 T 11-11-2016 IPR000014 PAS domain RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 Pfam PF12833 Helix-turn-helix domain 188 266 9.6E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 2.2E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB5275 e09af0b2dfd1c0b6713ce514754e0ff2 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 2.2E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RB10801 6e2eebdd9a74745cf9855992c9484286 843 Pfam PF13519 von Willebrand factor type A domain 128 236 2.6E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB10801 6e2eebdd9a74745cf9855992c9484286 843 Gene3D G3DSA:3.40.50.880 364 632 8.9E-56 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB10801 6e2eebdd9a74745cf9855992c9484286 843 Gene3D G3DSA:3.40.50.410 128 275 4.6E-8 T 11-11-2016 IPR002035 von Willebrand factor, type A RB10801 6e2eebdd9a74745cf9855992c9484286 843 Gene3D G3DSA:3.40.50.410 763 796 4.6E-8 T 11-11-2016 IPR002035 von Willebrand factor, type A RB10801 6e2eebdd9a74745cf9855992c9484286 843 Pfam PF07090 Putative glutamine amidotransferase 460 630 1.7E-8 T 11-11-2016 IPR010768 Putative glutamine amidotransferase RB10801 6e2eebdd9a74745cf9855992c9484286 843 SUPERFAMILY SSF53300 127 285 1.08E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB10801 6e2eebdd9a74745cf9855992c9484286 843 SUPERFAMILY SSF52317 372 631 1.14E-37 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8254 e9c808bb989d3127d85fea970db9e6aa 729 SUPERFAMILY SSF52402 605 725 4.1E-10 T 11-11-2016 RB8254 e9c808bb989d3127d85fea970db9e6aa 729 Pfam PF00582 Universal stress protein family 632 725 3.8E-7 T 11-11-2016 IPR006016 UspA GO:0006950 RB8254 e9c808bb989d3127d85fea970db9e6aa 729 Gene3D G3DSA:3.40.50.620 583 725 1.1E-11 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8254 e9c808bb989d3127d85fea970db9e6aa 729 Pfam PF13520 Amino acid permease 2 418 5.3E-35 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RB4937 941dbb1d9c5c94963958393a840acae8 369 Gene3D G3DSA:3.40.50.720 1 129 2.8E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4937 941dbb1d9c5c94963958393a840acae8 369 SUPERFAMILY SSF55347 156 273 2.83E-11 T 11-11-2016 RB4937 941dbb1d9c5c94963958393a840acae8 369 SUPERFAMILY SSF51735 2 144 1.65E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4937 941dbb1d9c5c94963958393a840acae8 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 4.2E-25 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB4937 941dbb1d9c5c94963958393a840acae8 369 Gene3D G3DSA:3.30.360.10 130 333 4.5E-22 T 11-11-2016 RB5744 329de3497e6b64211f4da21e8acdf8c2 702 SMART SM00044 363 605 2.8E-4 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB5744 329de3497e6b64211f4da21e8acdf8c2 702 SUPERFAMILY SSF55073 422 630 4.71E-33 T 11-11-2016 IPR029787 Nucleotide cyclase RB5744 329de3497e6b64211f4da21e8acdf8c2 702 SUPERFAMILY SSF49879 82 141 8.91E-5 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB5744 329de3497e6b64211f4da21e8acdf8c2 702 Gene3D G3DSA:3.30.70.1230 427 629 4.7E-23 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB5744 329de3497e6b64211f4da21e8acdf8c2 702 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 428 629 4.6E-14 T 11-11-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 RB12623 2de81dc74be1c54bd7b0f24011fccb9d 127 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 5.1E-47 T 11-11-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB12623 2de81dc74be1c54bd7b0f24011fccb9d 127 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.006 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB12623 2de81dc74be1c54bd7b0f24011fccb9d 127 Gene3D G3DSA:4.10.910.10 73 121 7.9E-25 T 11-11-2016 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB12623 2de81dc74be1c54bd7b0f24011fccb9d 127 Pfam PF00416 Ribosomal protein S13/S18 3 109 3.0E-29 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB12623 2de81dc74be1c54bd7b0f24011fccb9d 127 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-11-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB12623 2de81dc74be1c54bd7b0f24011fccb9d 127 PIRSF PIRSF002134 1 125 7.0E-44 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB12623 2de81dc74be1c54bd7b0f24011fccb9d 127 SUPERFAMILY SSF46946 3 121 2.88E-43 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RB12623 2de81dc74be1c54bd7b0f24011fccb9d 127 Gene3D G3DSA:1.10.8.50 1 72 1.1E-23 T 11-11-2016 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SUPERFAMILY SSF51126 292 654 3.3E-25 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.60.40.60 942 1026 7.5E-9 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.60.40.60 1655 1757 5.1E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.60.40.60 1758 1860 3.3E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.60.40.60 1448 1551 1.8E-6 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.60.40.60 1552 1654 3.5E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.60.40.60 1861 1963 5.0E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.60.40.60 1964 2066 8.1E-5 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SUPERFAMILY SSF49313 950 1027 1.38E-9 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SUPERFAMILY SSF49313 1447 1547 5.02E-5 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Pfam PF14252 Domain of unknown function (DUF4347) 125 291 2.4E-51 T 11-11-2016 IPR025592 Domain of unknown function DUF4347 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.160.20.10 292 653 3.0E-28 T 11-11-2016 IPR012334 Pectin lyase fold RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.120.10.30 780 918 7.5E-35 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.120.10.30 660 774 6.7E-24 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SUPERFAMILY SSF49313 1862 1959 8.79E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SUPERFAMILY SSF49313 1655 1753 2.2E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00112 1473 1555 0.82 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00112 1886 1967 0.034 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00112 1580 1658 0.4 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00112 953 1032 0.042 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00112 1683 1761 0.013 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00112 1786 1864 0.4 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00112 1992 2070 0.36 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00112 1375 1450 4.7E-11 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Pfam PF00028 Cadherin domain 945 1024 5.3E-7 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Pfam PF00028 Cadherin domain 1360 1442 3.3E-8 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SUPERFAMILY SSF63829 679 920 2.29E-31 T 11-11-2016 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Gene3D G3DSA:2.60.40.60 1360 1447 5.6E-13 T 11-11-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Pfam PF00058 Low-density lipoprotein receptor repeat class B 660 693 3.3E-4 T 11-11-2016 IPR000033 LDLR class B repeat RB154 278a83b88ec18093ef9f9042bf2089ac 2515 Pfam PF00058 Low-density lipoprotein receptor repeat class B 881 916 1.2E-4 T 11-11-2016 IPR000033 LDLR class B repeat RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00135 682 724 1.0E-4 T 11-11-2016 IPR000033 LDLR class B repeat RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00135 725 769 0.25 T 11-11-2016 IPR000033 LDLR class B repeat RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00135 861 903 1.6E-12 T 11-11-2016 IPR000033 LDLR class B repeat RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00135 773 816 1.7E-4 T 11-11-2016 IPR000033 LDLR class B repeat RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SMART SM00135 817 860 7.1E-4 T 11-11-2016 IPR000033 LDLR class B repeat RB154 278a83b88ec18093ef9f9042bf2089ac 2515 SUPERFAMILY SSF49313 1360 1442 1.1E-11 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 Gene3D G3DSA:3.40.50.720 14 248 7.4E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.1E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.1E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.1E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.1E-16 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 5.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 5.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 5.4E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 197 0.0024 T 11-11-2016 RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 Pfam PF00106 short chain dehydrogenase 15 210 6.3E-45 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7004 384451f43b7ad4b1d30433e0d210d6bb 271 SUPERFAMILY SSF51735 13 243 1.51E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 SUPERFAMILY SSF55781 219 357 5.67E-25 T 11-11-2016 IPR029016 GAF domain-like RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 Gene3D G3DSA:3.40.50.2300 450 578 5.1E-24 T 11-11-2016 RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 Gene3D G3DSA:3.30.450.40 220 360 9.7E-23 T 11-11-2016 IPR029016 GAF domain-like RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 Pfam PF00072 Response regulator receiver domain 454 571 2.3E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 Pfam PF08448 PAS fold 85 187 4.4E-10 T 11-11-2016 IPR013656 PAS fold-4 RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 Pfam PF13185 GAF domain 257 356 1.3E-13 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 SMART SM00091 78 145 0.0085 T 11-11-2016 IPR000014 PAS domain RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 SMART SM00448 452 571 7.6E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 SMART SM00065 221 366 8.9E-11 T 11-11-2016 IPR003018 GAF domain GO:0005515 RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 SUPERFAMILY SSF55785 83 173 1.26E-10 T 11-11-2016 IPR000014 PAS domain RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 SUPERFAMILY SSF52172 450 577 4.98E-24 T 11-11-2016 IPR011006 CheY-like superfamily RB7461 468bb5c0a58d5d46b7602ceb762afa2c 614 Gene3D G3DSA:3.30.450.20 83 187 9.6E-12 T 11-11-2016 RB588 ec1cabef864a5d7f1cc6d61591387ba2 1340 Pfam PF07635 Planctomycete cytochrome C 577 628 7.3E-9 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB588 ec1cabef864a5d7f1cc6d61591387ba2 1340 Pfam PF07631 Protein of unknown function (DUF1592) 995 1121 3.5E-44 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB588 ec1cabef864a5d7f1cc6d61591387ba2 1340 Pfam PF07626 Protein of unknown function (DUF1587) 665 727 3.1E-19 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB588 ec1cabef864a5d7f1cc6d61591387ba2 1340 Pfam PF07627 Protein of unknown function (DUF1588) 1140 1236 2.4E-34 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB588 ec1cabef864a5d7f1cc6d61591387ba2 1340 Pfam PF07637 Protein of unknown function (DUF1595) 918 977 4.3E-20 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB588 ec1cabef864a5d7f1cc6d61591387ba2 1340 Pfam PF07624 Protein of unknown function (DUF1585) 1251 1324 3.6E-21 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB12608 58f41176e91f7ae6b15b9df8fa26c720 604 Pfam PF02706 Chain length determinant protein 45 232 1.5E-6 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RB2774 15a51018583239f12563412a02ae0112 82 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 64 15.108 T 11-11-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RB2774 15a51018583239f12563412a02ae0112 82 Gene3D G3DSA:3.30.50.10 4 55 4.6E-19 T 11-11-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 RB2774 15a51018583239f12563412a02ae0112 82 Pfam PF03884 Domain of unknown function (DUF329) 7 54 1.4E-18 T 11-11-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RB2774 15a51018583239f12563412a02ae0112 82 SUPERFAMILY SSF57716 3 58 5.99E-17 T 11-11-2016 RB10560 d1e434863ee19b9f35025eab5b468fa9 934 Pfam PF03958 Bacterial type II/III secretion system short domain 666 765 2.7E-9 T 11-11-2016 IPR005644 NolW-like RB10560 d1e434863ee19b9f35025eab5b468fa9 934 Pfam PF03958 Bacterial type II/III secretion system short domain 308 375 1.9E-6 T 11-11-2016 IPR005644 NolW-like RB10560 d1e434863ee19b9f35025eab5b468fa9 934 Pfam PF03958 Bacterial type II/III secretion system short domain 777 888 2.5E-15 T 11-11-2016 IPR005644 NolW-like RB11527 4341e884e24e046dd7f8825c73fd6fab 237 SUPERFAMILY SSF53448 7 217 3.19E-22 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11527 4341e884e24e046dd7f8825c73fd6fab 237 Gene3D G3DSA:3.90.550.10 62 205 2.3E-12 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11527 4341e884e24e046dd7f8825c73fd6fab 237 Pfam PF00535 Glycosyl transferase family 2 11 169 2.2E-7 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB5820 8651d397cd507654befac143f05fc308 355 SUPERFAMILY SSF51430 22 342 5.11E-33 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB5820 8651d397cd507654befac143f05fc308 355 Pfam PF00248 Aldo/keto reductase family 25 342 2.5E-32 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB5820 8651d397cd507654befac143f05fc308 355 Gene3D G3DSA:3.20.20.100 22 339 5.4E-26 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB10515 86574ece68ea491cd42c1717b7d061ef 422 Pfam PF01882 Protein of unknown function DUF58 222 300 9.1E-22 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB4611 743570a6cdc3a34cce23da701316f7e1 145 SUPERFAMILY SSF48013 6 136 2.09E-35 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RB4611 743570a6cdc3a34cce23da701316f7e1 145 Pfam PF01029 NusB family 9 133 1.1E-32 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RB4611 743570a6cdc3a34cce23da701316f7e1 145 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 6 138 21.273 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 RB4611 743570a6cdc3a34cce23da701316f7e1 145 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 8 135 1.1E-37 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 RB4611 743570a6cdc3a34cce23da701316f7e1 145 Gene3D G3DSA:1.10.940.10 4 133 1.2E-39 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RB4815 86ce5b59cab49648a8a506bfbee99184 491 ProSitePatterns PS00149 Sulfatases signature 2. 130 140 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB4815 86ce5b59cab49648a8a506bfbee99184 491 Pfam PF00884 Sulfatase 29 354 1.6E-72 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB4815 86ce5b59cab49648a8a506bfbee99184 491 ProSitePatterns PS00523 Sulfatases signature 1. 75 87 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB4815 86ce5b59cab49648a8a506bfbee99184 491 Gene3D G3DSA:3.40.720.10 26 367 2.7E-109 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4815 86ce5b59cab49648a8a506bfbee99184 491 SUPERFAMILY SSF53649 27 472 3.4E-120 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB4815 86ce5b59cab49648a8a506bfbee99184 491 Gene3D G3DSA:3.30.1120.10 368 471 5.9E-14 T 11-11-2016 RB10553 fb7aa34fd640ed0232214997b9dbda8e 294 SUPERFAMILY SSF81343 9 252 3.27E-49 T 11-11-2016 RB10553 fb7aa34fd640ed0232214997b9dbda8e 294 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 106 230 5.2E-7 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10553 fb7aa34fd640ed0232214997b9dbda8e 294 Gene3D G3DSA:1.20.950.10 25 253 1.6E-39 T 11-11-2016 RB1178 6717c85bd6e2e3e401ff0ced315aa3be 71 Gene3D G3DSA:1.10.443.10 13 56 8.8E-9 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB1178 6717c85bd6e2e3e401ff0ced315aa3be 71 SUPERFAMILY SSF56349 13 54 9.12E-8 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB11100 72ee4c72a14d74bf46ca9cb8b2000ca4 137 SMART SM00529 36 134 2.3E-24 T 11-11-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 RB11100 72ee4c72a14d74bf46ca9cb8b2000ca4 137 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 15 70 1.1E-10 T 11-11-2016 IPR022687 DTXR-type HTH domain GO:0003677 RB11100 72ee4c72a14d74bf46ca9cb8b2000ca4 137 SUPERFAMILY SSF46785 16 74 6.37E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11100 72ee4c72a14d74bf46ca9cb8b2000ca4 137 Gene3D G3DSA:1.10.60.10 87 130 2.3E-15 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB11100 72ee4c72a14d74bf46ca9cb8b2000ca4 137 Gene3D G3DSA:1.10.10.10 14 83 2.0E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11100 72ee4c72a14d74bf46ca9cb8b2000ca4 137 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 75 130 2.2E-11 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB11100 72ee4c72a14d74bf46ca9cb8b2000ca4 137 SUPERFAMILY SSF47979 75 130 4.45E-13 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB11179 7a1d4e3d7852edf86a54caace097b285 345 SUPERFAMILY SSF52402 43 189 1.84E-32 T 11-11-2016 RB11179 7a1d4e3d7852edf86a54caace097b285 345 SUPERFAMILY SSF52402 195 326 3.68E-22 T 11-11-2016 RB11179 7a1d4e3d7852edf86a54caace097b285 345 Pfam PF00582 Universal stress protein family 195 324 5.8E-18 T 11-11-2016 IPR006016 UspA GO:0006950 RB11179 7a1d4e3d7852edf86a54caace097b285 345 Pfam PF00582 Universal stress protein family 44 183 5.4E-26 T 11-11-2016 IPR006016 UspA GO:0006950 RB11179 7a1d4e3d7852edf86a54caace097b285 345 Gene3D G3DSA:3.40.50.620 198 325 1.1E-20 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB11179 7a1d4e3d7852edf86a54caace097b285 345 PRINTS PR01438 Universal stress protein signature 43 61 1.6E-16 T 11-11-2016 IPR006015 Universal stress protein A RB11179 7a1d4e3d7852edf86a54caace097b285 345 PRINTS PR01438 Universal stress protein signature 161 183 1.6E-16 T 11-11-2016 IPR006015 Universal stress protein A RB11179 7a1d4e3d7852edf86a54caace097b285 345 PRINTS PR01438 Universal stress protein signature 143 155 1.6E-16 T 11-11-2016 IPR006015 Universal stress protein A RB11179 7a1d4e3d7852edf86a54caace097b285 345 Gene3D G3DSA:3.40.50.620 43 185 2.1E-34 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB4610 6371518973a14146ba7013a2c1b88b75 207 Gene3D G3DSA:1.10.150.20 75 141 1.6E-15 T 11-11-2016 RB4610 6371518973a14146ba7013a2c1b88b75 207 Gene3D G3DSA:2.40.50.140 1 58 2.1E-6 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB4610 6371518973a14146ba7013a2c1b88b75 207 Pfam PF14520 Helix-hairpin-helix domain 79 135 1.1E-7 T 11-11-2016 RB4610 6371518973a14146ba7013a2c1b88b75 207 Pfam PF01330 RuvA N terminal domain 1 54 7.5E-6 T 11-11-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RB4610 6371518973a14146ba7013a2c1b88b75 207 SUPERFAMILY SSF47781 73 143 6.67E-12 T 11-11-2016 IPR010994 RuvA domain 2-like RB4610 6371518973a14146ba7013a2c1b88b75 207 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 207 19.375 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RB11077 5618d22f59bc77810d016c3837bd04d1 155 Pfam PF02082 Transcriptional regulator 15 95 9.3E-23 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type RB11077 5618d22f59bc77810d016c3837bd04d1 155 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 15 143 2.0E-31 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type RB11077 5618d22f59bc77810d016c3837bd04d1 155 Gene3D G3DSA:1.10.10.10 15 148 6.5E-37 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11077 5618d22f59bc77810d016c3837bd04d1 155 SUPERFAMILY SSF46785 16 145 2.26E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11077 5618d22f59bc77810d016c3837bd04d1 155 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 61 79 - T 11-11-2016 IPR030489 Transcription regulator Rrf2-type, conserved site RB1262 31ee1f36fa9e843de488b65170d15536 1145 Pfam PF02811 PHP domain 107 223 6.6E-13 T 11-11-2016 IPR004013 PHP domain GO:0003824 RB1262 31ee1f36fa9e843de488b65170d15536 1145 Gene3D G3DSA:2.40.50.140 1046 1133 1.4E-4 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB1262 31ee1f36fa9e843de488b65170d15536 1145 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 105 1090 2.7E-176 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1262 31ee1f36fa9e843de488b65170d15536 1145 Gene3D G3DSA:1.10.150.280 913 959 2.7E-5 T 11-11-2016 RB1262 31ee1f36fa9e843de488b65170d15536 1145 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 105 1145 13.795 T 11-11-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1262 31ee1f36fa9e843de488b65170d15536 1145 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 384 808 2.7E-144 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1262 31ee1f36fa9e843de488b65170d15536 1145 SMART SM00481 106 173 1.1E-15 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RB1262 31ee1f36fa9e843de488b65170d15536 1145 SUPERFAMILY SSF89550 103 183 1.57E-12 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RB1262 31ee1f36fa9e843de488b65170d15536 1145 Pfam PF14579 Helix-hairpin-helix motif 881 973 6.2E-21 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RB1262 31ee1f36fa9e843de488b65170d15536 1145 Gene3D G3DSA:3.20.20.140 105 170 9.0E-9 T 11-11-2016 RB8027 2785689206413a3cc8c4d393bf7fedcb 232 SUPERFAMILY SSF88946 18 131 1.8E-7 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8027 2785689206413a3cc8c4d393bf7fedcb 232 Gene3D G3DSA:1.10.1740.10 21 138 2.3E-6 T 11-11-2016 RB8027 2785689206413a3cc8c4d393bf7fedcb 232 SUPERFAMILY SSF88659 158 214 1.35E-6 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8027 2785689206413a3cc8c4d393bf7fedcb 232 Pfam PF07638 ECF sigma factor 23 215 2.2E-73 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB8027 2785689206413a3cc8c4d393bf7fedcb 232 Gene3D G3DSA:1.10.10.10 179 214 1.8E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4556 fe522b142605bcfbdc716b95075b4ff1 343 Pfam PF07596 Protein of unknown function (DUF1559) 39 324 5.9E-67 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB4556 fe522b142605bcfbdc716b95075b4ff1 343 Gene3D G3DSA:3.30.700.10 15 79 4.0E-8 T 11-11-2016 RB4556 fe522b142605bcfbdc716b95075b4ff1 343 SUPERFAMILY SSF54523 15 130 5.02E-22 T 11-11-2016 RB4556 fe522b142605bcfbdc716b95075b4ff1 343 Pfam PF13633 Prokaryotic N-terminal methylation site 13 38 1.2E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4556 fe522b142605bcfbdc716b95075b4ff1 343 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 2.0E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB908 3221edddaf1549e55bda9151f1e7f670 503 Pfam PF04773 FecR protein 184 267 3.5E-6 T 11-11-2016 IPR006860 FecR protein RB5421 5d7661a69206762f15407162c291c4e5 570 SUPERFAMILY SSF49899 349 565 3.85E-30 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5421 5d7661a69206762f15407162c291c4e5 570 SMART SM00560 390 556 1.6E-5 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB5421 5d7661a69206762f15407162c291c4e5 570 Pfam PF04773 FecR protein 207 260 5.9E-6 T 11-11-2016 IPR006860 FecR protein RB5421 5d7661a69206762f15407162c291c4e5 570 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 389 559 4.8E-18 T 11-11-2016 RB5421 5d7661a69206762f15407162c291c4e5 570 Gene3D G3DSA:2.60.120.200 349 564 7.9E-24 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB4419 1ff077117e508a73bb608e86e4b48d70 178 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.6E-32 T 11-11-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RB4419 1ff077117e508a73bb608e86e4b48d70 178 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.6E-32 T 11-11-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RB4419 1ff077117e508a73bb608e86e4b48d70 178 PRINTS PR01837 MgtC/SapB protein signature 78 100 1.6E-32 T 11-11-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RB4419 1ff077117e508a73bb608e86e4b48d70 178 PRINTS PR01837 MgtC/SapB protein signature 106 130 1.6E-32 T 11-11-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RB4419 1ff077117e508a73bb608e86e4b48d70 178 Pfam PF02308 MgtC family 20 151 1.2E-32 T 11-11-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RB8071 138a2e0325fed0823cd9fd0aca572e9a 731 Pfam PF12773 Double zinc ribbon 13 56 3.0E-8 T 11-11-2016 IPR025874 Double zinc ribbon RB8071 138a2e0325fed0823cd9fd0aca572e9a 731 Pfam PF11104 Type IV pilus assembly protein PilM; 402 668 7.1E-13 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM RB8071 138a2e0325fed0823cd9fd0aca572e9a 731 Gene3D G3DSA:3.30.420.40 616 724 1.5E-7 T 11-11-2016 RB6263 e3c3f8f18ea129f9baac1e1ae4d64848 606 Gene3D G3DSA:3.40.50.300 52 227 6.5E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6263 e3c3f8f18ea129f9baac1e1ae4d64848 606 SUPERFAMILY SSF52540 49 206 1.68E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12436 29ca8ec304a2c60921d567a9fdd8f42f 482 SUPERFAMILY SSF47979 407 477 2.88E-17 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB12436 29ca8ec304a2c60921d567a9fdd8f42f 482 Gene3D G3DSA:1.10.60.10 417 478 3.1E-19 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB12436 29ca8ec304a2c60921d567a9fdd8f42f 482 Pfam PF00950 ABC 3 transport family 24 131 5.3E-23 T 11-11-2016 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 RB12436 29ca8ec304a2c60921d567a9fdd8f42f 482 Pfam PF00950 ABC 3 transport family 164 274 2.2E-22 T 11-11-2016 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 RB12436 29ca8ec304a2c60921d567a9fdd8f42f 482 SMART SM00529 379 467 0.0036 T 11-11-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 RB12436 29ca8ec304a2c60921d567a9fdd8f42f 482 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 407 475 3.2E-19 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RB12436 29ca8ec304a2c60921d567a9fdd8f42f 482 SUPERFAMILY SSF81345 19 278 1.7E-24 T 11-11-2016 IPR029022 ABC transporter, BtuC-like RB12436 29ca8ec304a2c60921d567a9fdd8f42f 482 Gene3D G3DSA:1.10.3470.10 54 299 5.7E-8 T 11-11-2016 IPR029022 ABC transporter, BtuC-like RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 Pfam PF12708 Pectate lyase superfamily protein 64 305 6.5E-33 T 11-11-2016 IPR024535 Pectate lyase superfamily protein RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 Gene3D G3DSA:2.160.20.10 60 360 1.2E-23 T 11-11-2016 IPR012334 Pectin lyase fold RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 SMART SM00710 189 212 2300.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 SMART SM00710 213 235 2800.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 SMART SM00710 265 286 18.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 SMART SM00710 310 332 370.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 SMART SM00710 147 168 9000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 SMART SM00710 288 309 2000.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB5499 a1f664e46a1d048da5b72adc5343f0f3 447 SUPERFAMILY SSF51126 62 406 8.17E-36 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB1352 e1da94c4882798df4e85b82b4ee1b34c 446 Pfam PF03841 L-seryl-tRNA selenium transferase 271 429 2.3E-9 T 11-11-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 RB10957 13819340d9fce9e25fc9ad0eeb5862a3 99 SMART SM00959 61 99 1.8E-4 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RB10957 13819340d9fce9e25fc9ad0eeb5862a3 99 Pfam PF07498 Rho termination factor, N-terminal domain 62 96 5.2E-9 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RB10957 13819340d9fce9e25fc9ad0eeb5862a3 99 Gene3D G3DSA:1.10.720.10 61 94 1.4E-6 T 11-11-2016 RB10957 13819340d9fce9e25fc9ad0eeb5862a3 99 SUPERFAMILY SSF68912 60 96 1.1E-6 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RB8524 5ec1c3aa1a6c9e897ddcc9419c34a540 495 Gene3D G3DSA:3.30.300.30 374 407 3.7E-4 T 11-11-2016 RB8524 5ec1c3aa1a6c9e897ddcc9419c34a540 495 SUPERFAMILY SSF56801 9 481 9.68E-79 T 11-11-2016 RB8524 5ec1c3aa1a6c9e897ddcc9419c34a540 495 Pfam PF00501 AMP-binding enzyme 15 380 5.1E-60 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RB8524 5ec1c3aa1a6c9e897ddcc9419c34a540 495 Gene3D G3DSA:3.40.50.980 161 308 7.7E-25 T 11-11-2016 RB8524 5ec1c3aa1a6c9e897ddcc9419c34a540 495 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 11-11-2016 IPR020845 AMP-binding, conserved site RB8524 5ec1c3aa1a6c9e897ddcc9419c34a540 495 Gene3D G3DSA:2.30.38.10 322 373 1.4E-15 T 11-11-2016 RB8524 5ec1c3aa1a6c9e897ddcc9419c34a540 495 Gene3D G3DSA:3.40.50.980 12 160 3.7E-19 T 11-11-2016 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 PRINTS PR00301 70kDa heat shock protein signature 259 269 2.3E-8 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 PRINTS PR00301 70kDa heat shock protein signature 30 43 2.3E-8 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 PRINTS PR00301 70kDa heat shock protein signature 191 211 2.3E-8 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 SUPERFAMILY SSF53067 29 234 4.81E-31 T 11-11-2016 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 Gene3D G3DSA:3.30.420.40 169 258 5.3E-34 T 11-11-2016 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 Gene3D G3DSA:3.30.420.40 30 130 5.3E-34 T 11-11-2016 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 253 266 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 34 41 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 Gene3D G3DSA:3.30.420.40 259 350 2.9E-9 T 11-11-2016 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 SUPERFAMILY SSF53067 426 481 1.92E-26 T 11-11-2016 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 SUPERFAMILY SSF53067 248 398 1.92E-26 T 11-11-2016 RB5754 0fd7daf40442fd85878c69b698fd6f04 645 Pfam PF00012 Hsp70 protein 111 331 8.2E-14 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RB6510 8beac64a2cb7d539be3fe2668e8ff69b 480 Gene3D G3DSA:3.40.720.10 364 463 1.0E-5 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB6510 8beac64a2cb7d539be3fe2668e8ff69b 480 SUPERFAMILY SSF53649 303 465 1.21E-14 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6510 8beac64a2cb7d539be3fe2668e8ff69b 480 Pfam PF07394 Protein of unknown function (DUF1501) 45 480 1.1E-138 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 2.5E-14 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 SUPERFAMILY SSF52540 9 230 7.83E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 Pfam PF03143 Elongation factor Tu C-terminal domain 303 396 6.0E-31 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 Pfam PF03144 Elongation factor Tu domain 2 229 298 1.7E-17 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 56.715 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 Gene3D G3DSA:3.40.50.300 3 212 3.6E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 SUPERFAMILY SSF50447 207 306 2.16E-29 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 398 3.5E-204 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 5.7E-21 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 PRINTS PR00315 GTP-binding elongation factor signature 60 68 5.7E-21 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 PRINTS PR00315 GTP-binding elongation factor signature 133 142 5.7E-21 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 PRINTS PR00315 GTP-binding elongation factor signature 96 107 5.7E-21 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 PRINTS PR00315 GTP-binding elongation factor signature 80 90 5.7E-21 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 205 2.6E-51 T 11-11-2016 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 Gene3D G3DSA:2.40.30.10 305 397 1.9E-44 T 11-11-2016 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 Gene3D G3DSA:2.40.30.10 213 303 3.4E-36 T 11-11-2016 RB7894 c9d1f852ebc0ea0a77e0ce4b5b021793 398 SUPERFAMILY SSF50465 303 397 2.26E-34 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RB11088 85f8f25aa997722093bc79b342c4cd46 615 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 175 237 2.4E-12 T 11-11-2016 RB11088 85f8f25aa997722093bc79b342c4cd46 615 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 273 325 3.6E-6 T 11-11-2016 RB11088 85f8f25aa997722093bc79b342c4cd46 615 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 426 509 6.4E-7 T 11-11-2016 RB11088 85f8f25aa997722093bc79b342c4cd46 615 SUPERFAMILY SSF69318 101 521 1.26E-49 T 11-11-2016 RB11088 85f8f25aa997722093bc79b342c4cd46 615 Pfam PF07593 ASPIC and UnbV 545 610 1.0E-17 T 11-11-2016 IPR011519 ASPIC/UnbV RB11088 85f8f25aa997722093bc79b342c4cd46 615 Gene3D G3DSA:2.130.10.130 93 240 1.5E-13 T 11-11-2016 RB11088 85f8f25aa997722093bc79b342c4cd46 615 Gene3D G3DSA:2.130.10.130 423 521 1.2E-10 T 11-11-2016 RB11088 85f8f25aa997722093bc79b342c4cd46 615 Gene3D G3DSA:2.130.10.130 272 366 1.2E-10 T 11-11-2016 RB11119 0ba6116529ed9b3d85b7326715abe158 404 SUPERFAMILY SSF54001 239 380 1.31E-33 T 11-11-2016 RB11119 0ba6116529ed9b3d85b7326715abe158 404 SUPERFAMILY SSF82057 119 164 5.19E-5 T 11-11-2016 RB11119 0ba6116529ed9b3d85b7326715abe158 404 Gene3D G3DSA:3.90.1720.10 244 380 2.9E-36 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain RB11119 0ba6116529ed9b3d85b7326715abe158 404 Pfam PF00877 NlpC/P60 family 258 361 8.2E-24 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain RB11119 0ba6116529ed9b3d85b7326715abe158 404 Gene3D G3DSA:2.30.30.40 120 165 8.4E-4 T 11-11-2016 RB7898 6553ed68606a970bd62eb4df88043a20 225 Gene3D G3DSA:2.30.30.30 167 224 2.0E-20 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 RB7898 6553ed68606a970bd62eb4df88043a20 225 Gene3D G3DSA:3.30.70.940 48 155 5.1E-30 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RB7898 6553ed68606a970bd62eb4df88043a20 225 SUPERFAMILY SSF50104 162 224 3.4E-15 T 11-11-2016 IPR008991 Translation protein SH3-like domain RB7898 6553ed68606a970bd62eb4df88043a20 225 SMART SM00739 171 198 0.0035 T 11-11-2016 IPR005824 KOW RB7898 6553ed68606a970bd62eb4df88043a20 225 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 50 223 3.8E-46 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RB7898 6553ed68606a970bd62eb4df88043a20 225 Pfam PF02357 Transcription termination factor nusG 48 152 2.3E-18 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RB7898 6553ed68606a970bd62eb4df88043a20 225 SUPERFAMILY SSF82679 48 154 2.35E-27 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RB7898 6553ed68606a970bd62eb4df88043a20 225 SMART SM00738 47 156 3.7E-31 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RB7898 6553ed68606a970bd62eb4df88043a20 225 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 47 225 20.083 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RB7898 6553ed68606a970bd62eb4df88043a20 225 PRINTS PR00338 Transcription termination factor NUSG signature 183 198 8.6E-11 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RB7898 6553ed68606a970bd62eb4df88043a20 225 PRINTS PR00338 Transcription termination factor NUSG signature 103 115 8.6E-11 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RB7898 6553ed68606a970bd62eb4df88043a20 225 PRINTS PR00338 Transcription termination factor NUSG signature 201 217 8.6E-11 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RB10797 6365304c5a7d02f1b37c137f66907f58 271 Gene3D G3DSA:3.40.50.1820 23 269 1.0E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10797 6365304c5a7d02f1b37c137f66907f58 271 SUPERFAMILY SSF53474 23 266 3.83E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10797 6365304c5a7d02f1b37c137f66907f58 271 Pfam PF02230 Phospholipase/Carboxylesterase 23 263 6.6E-20 T 11-11-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 RB5795 90ddf9109967208d9c045efe68fda0f2 235 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 88 224 3.1E-25 T 11-11-2016 IPR002178 PTS EIIA type-2 domain RB5795 90ddf9109967208d9c045efe68fda0f2 235 SUPERFAMILY SSF55804 79 224 1.29E-22 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RB5795 90ddf9109967208d9c045efe68fda0f2 235 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 8 50 1.5E-9 T 11-11-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RB5795 90ddf9109967208d9c045efe68fda0f2 235 Gene3D G3DSA:1.10.10.10 8 52 2.6E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB5795 90ddf9109967208d9c045efe68fda0f2 235 Pfam PF12728 Helix-turn-helix domain 4 52 1.2E-10 T 11-11-2016 RB5795 90ddf9109967208d9c045efe68fda0f2 235 Gene3D G3DSA:3.40.930.10 84 227 7.0E-26 T 11-11-2016 IPR002178 PTS EIIA type-2 domain RB5795 90ddf9109967208d9c045efe68fda0f2 235 SUPERFAMILY SSF46955 4 54 2.01E-7 T 11-11-2016 IPR009061 Putative DNA-binding domain RB815 df93893aa64c63e12bfc3442a372c291 290 SUPERFAMILY SSF53098 126 282 7.44E-35 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB815 df93893aa64c63e12bfc3442a372c291 290 Pfam PF00665 Integrase core domain 130 244 1.4E-29 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB815 df93893aa64c63e12bfc3442a372c291 290 Gene3D G3DSA:3.30.420.10 125 281 7.0E-33 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB815 df93893aa64c63e12bfc3442a372c291 290 Pfam PF13276 HTH-like domain 56 102 3.4E-9 T 11-11-2016 IPR025948 HTH-like domain RB2206 6cde5a73918decb607bd685e5465b762 223 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 3 221 1.7E-68 T 11-11-2016 IPR026461 Transferase 2, rSAM/selenodomain-associated RB2206 6cde5a73918decb607bd685e5465b762 223 Pfam PF00535 Glycosyl transferase family 2 4 96 1.8E-16 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB2206 6cde5a73918decb607bd685e5465b762 223 SUPERFAMILY SSF53448 1 176 7.95E-36 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB2206 6cde5a73918decb607bd685e5465b762 223 Gene3D G3DSA:3.90.550.10 1 175 7.2E-29 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB4440 c8c2946c5fa3b4240853f9e36387792c 347 SUPERFAMILY SSF51556 59 338 1.62E-49 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB4440 c8c2946c5fa3b4240853f9e36387792c 347 Gene3D G3DSA:3.20.20.140 56 340 9.1E-48 T 11-11-2016 RB4440 c8c2946c5fa3b4240853f9e36387792c 347 Pfam PF04909 Amidohydrolase 63 337 8.1E-38 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB8188 f2845da0ffa6e22556325e6c27640d99 259 SUPERFAMILY SSF51658 8 257 4.7E-64 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8188 f2845da0ffa6e22556325e6c27640d99 259 PIRSF PIRSF006241 5 259 1.2E-84 T 11-11-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RB8188 f2845da0ffa6e22556325e6c27640d99 259 Pfam PF01261 Xylose isomerase-like TIM barrel 27 213 7.4E-33 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8188 f2845da0ffa6e22556325e6c27640d99 259 Gene3D G3DSA:3.20.20.150 8 256 2.0E-68 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12112 6dd987d92eb2ee3000260d00edc2f1a0 616 Pfam PF03983 SLA1 homology domain 1, SHD1 540 604 3.5E-23 T 11-11-2016 IPR007131 SLA1 homology domain 1, SHD1 GO:0008092|GO:0030674|GO:0042802|GO:0043130 RB12112 6dd987d92eb2ee3000260d00edc2f1a0 616 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 549 610 1.0E-22 T 11-11-2016 RB4835 bd07be3f02c2ab58f840d480db69c491 395 SUPERFAMILY SSF144091 2 192 4.84E-23 T 11-11-2016 RB4835 bd07be3f02c2ab58f840d480db69c491 395 Gene3D G3DSA:1.20.1540.10 2 190 1.4E-22 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB4835 bd07be3f02c2ab58f840d480db69c491 395 Pfam PF01694 Rhomboid family 37 190 1.7E-22 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 Pfam PF00338 Ribosomal protein S10p/S20e 10 104 1.4E-32 T 11-11-2016 IPR027486 Ribosomal protein S10 domain RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 SMART SM01403 10 104 5.3E-49 T 11-11-2016 IPR027486 Ribosomal protein S10 domain RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 PRINTS PR00971 Ribosomal protein S10 family signature 43 58 6.8E-16 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 PRINTS PR00971 Ribosomal protein S10 family signature 8 21 6.8E-16 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 PRINTS PR00971 Ribosomal protein S10 family signature 64 78 6.8E-16 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 SUPERFAMILY SSF54999 8 104 1.83E-33 T 11-11-2016 IPR027486 Ribosomal protein S10 domain RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 Gene3D G3DSA:3.30.70.600 7 105 3.1E-38 T 11-11-2016 IPR027486 Ribosomal protein S10 domain RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 9 104 1.1E-40 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7829 5be3127fd194e3e89d6af65c9c04a4f6 108 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 6 105 23.366 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB5846 331e9d1137e85743f9c87daff7f75982 297 Gene3D G3DSA:3.90.550.10 61 186 6.4E-20 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5846 331e9d1137e85743f9c87daff7f75982 297 Pfam PF00535 Glycosyl transferase family 2 65 191 6.6E-22 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB5846 331e9d1137e85743f9c87daff7f75982 297 SUPERFAMILY SSF53448 60 268 4.76E-29 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB4945 dd4262951e4763f5a98cf3ef72de5f68 490 Pfam PF04932 O-Antigen ligase 286 425 1.2E-9 T 11-11-2016 IPR007016 O-antigen ligase-related RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 SUPERFAMILY SSF47384 652 705 1.04E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 806 917 1.1E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 Gene3D G3DSA:1.10.287.130 652 693 8.8E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 878 896 9.5E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 847 861 9.5E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 875 9.5E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 PRINTS PR00344 Bacterial sensor protein C-terminal signature 903 916 9.5E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 Pfam PF13426 PAS domain 542 640 1.6E-5 T 11-11-2016 IPR000014 PAS domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 Pfam PF13426 PAS domain 427 519 4.5E-8 T 11-11-2016 IPR000014 PAS domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 Gene3D G3DSA:3.30.450.20 518 640 8.6E-14 T 11-11-2016 RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 Gene3D G3DSA:3.30.450.20 397 517 1.0E-10 T 11-11-2016 RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 SUPERFAMILY SSF55874 766 917 1.96E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 SUPERFAMILY SSF55785 542 649 7.42E-11 T 11-11-2016 IPR000014 PAS domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 SMART SM00387 802 919 4.1E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 SUPERFAMILY SSF55785 408 523 7.23E-12 T 11-11-2016 IPR000014 PAS domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 405 527 1.1E-13 T 11-11-2016 IPR000014 PAS domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 549 649 8.6E-6 T 11-11-2016 IPR000014 PAS domain RB7308 8a55db7889d784a6fe1c9a304a45ba12 946 Gene3D G3DSA:3.30.565.10 765 917 8.5E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB9218 46d6ae8ef2f4b88f37d909051017a15b 244 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 34 235 1.3E-48 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RB9218 46d6ae8ef2f4b88f37d909051017a15b 244 Pfam PF03853 YjeF-related protein N-terminus 52 214 2.5E-43 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RB9218 46d6ae8ef2f4b88f37d909051017a15b 244 SUPERFAMILY SSF64153 28 241 2.88E-60 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RB9218 46d6ae8ef2f4b88f37d909051017a15b 244 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 31 235 27.627 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RB9218 46d6ae8ef2f4b88f37d909051017a15b 244 Gene3D G3DSA:3.40.50.10260 30 237 2.0E-64 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 339 353 - T 11-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 SUPERFAMILY SSF56712 31 607 1.7E-180 T 11-11-2016 IPR023405 DNA topoisomerase, type IA, core domain RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Gene3D G3DSA:3.40.50.140 30 174 1.3E-47 T 11-11-2016 IPR006171 Toprim domain RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 33 671 2.2E-241 T 11-11-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 SMART SM00437 302 566 2.1E-113 T 11-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 529 543 2.6E-35 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 203 221 2.6E-35 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 423 439 2.6E-35 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 344 353 2.6E-35 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 119 132 2.6E-35 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Gene3D G3DSA:2.70.20.10 370 512 4.0E-31 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Gene3D G3DSA:2.70.20.10 225 366 1.5E-26 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Pfam PF01131 DNA topoisomerase 168 603 8.3E-119 T 11-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Pfam PF13368 Topoisomerase C-terminal repeat 708 766 2.2E-17 T 11-11-2016 IPR025589 Topoisomerase C-terminal repeat RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Pfam PF13368 Topoisomerase C-terminal repeat 768 821 4.4E-19 T 11-11-2016 IPR025589 Topoisomerase C-terminal repeat RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Pfam PF13368 Topoisomerase C-terminal repeat 836 887 5.2E-16 T 11-11-2016 IPR025589 Topoisomerase C-terminal repeat RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Pfam PF13368 Topoisomerase C-terminal repeat 652 699 1.1E-8 T 11-11-2016 IPR025589 Topoisomerase C-terminal repeat RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 SMART SM00493 31 145 4.1E-40 T 11-11-2016 IPR006171 Toprim domain RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Hamap MF_00952 DNA topoisomerase 1 [topA]. 31 780 50.802 T 11-11-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Pfam PF01751 Toprim domain 33 154 2.2E-27 T 11-11-2016 IPR006171 Toprim domain RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 SMART SM00436 145 233 5.1E-44 T 11-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Gene3D G3DSA:1.10.460.10 176 223 8.4E-48 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RB7957 c3a62f26a35c40424b101b7328b1d9e1 936 Gene3D G3DSA:1.10.460.10 513 607 8.4E-48 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RB4478 6c66697119db26e5dc06b1e6444cfc6b 172 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 17 132 1.4E-14 T 11-11-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RB3493 14d9fa7dc7272f6a370d19f848876d88 335 Pfam PF13407 Periplasmic binding protein domain 50 303 2.2E-56 T 11-11-2016 IPR025997 Periplasmic binding protein RB3493 14d9fa7dc7272f6a370d19f848876d88 335 Gene3D G3DSA:3.40.50.2300 47 165 6.2E-32 T 11-11-2016 RB3493 14d9fa7dc7272f6a370d19f848876d88 335 SUPERFAMILY SSF53822 46 313 1.3E-77 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB3493 14d9fa7dc7272f6a370d19f848876d88 335 Gene3D G3DSA:3.40.50.2300 166 326 3.6E-53 T 11-11-2016 RB6985 d958064360298ffe49303b4c68580581 516 Gene3D G3DSA:3.40.50.720 66 307 3.4E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6985 d958064360298ffe49303b4c68580581 516 SUPERFAMILY SSF51735 57 215 1.45E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6985 d958064360298ffe49303b4c68580581 516 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 67 184 3.3E-21 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB6985 d958064360298ffe49303b4c68580581 516 SUPERFAMILY SSF55347 191 216 1.53E-5 T 11-11-2016 RB6985 d958064360298ffe49303b4c68580581 516 SUPERFAMILY SSF55347 259 323 1.53E-5 T 11-11-2016 RB2788 91b539ed5f507b5857bb964b4226f68b 482 PRINTS PR00173 Glutamate-aspartate symporter signature 105 125 2.2E-67 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 PRINTS PR00173 Glutamate-aspartate symporter signature 399 418 2.2E-67 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 PRINTS PR00173 Glutamate-aspartate symporter signature 211 233 2.2E-67 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 PRINTS PR00173 Glutamate-aspartate symporter signature 135 160 2.2E-67 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 PRINTS PR00173 Glutamate-aspartate symporter signature 298 317 2.2E-67 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 PRINTS PR00173 Glutamate-aspartate symporter signature 426 446 2.2E-67 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 PRINTS PR00173 Glutamate-aspartate symporter signature 364 390 2.2E-67 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 Gene3D G3DSA:1.10.3860.10 65 471 1.6E-132 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 Pfam PF00375 Sodium:dicarboxylate symporter family 70 470 8.6E-125 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB2788 91b539ed5f507b5857bb964b4226f68b 482 SUPERFAMILY SSF118215 70 470 6.8E-107 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RB1260 39935b44e1b7d661c794865c79b1472c 346 Gene3D G3DSA:2.120.10.30 253 340 7.4E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB1260 39935b44e1b7d661c794865c79b1472c 346 Gene3D G3DSA:2.120.10.30 25 170 1.8E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB1260 39935b44e1b7d661c794865c79b1472c 346 SUPERFAMILY SSF75011 38 258 9.94E-18 T 11-11-2016 RB1260 39935b44e1b7d661c794865c79b1472c 346 SUPERFAMILY SSF75011 311 325 9.94E-18 T 11-11-2016 RB1260 39935b44e1b7d661c794865c79b1472c 346 Gene3D G3DSA:2.130.10.10 171 252 5.3E-5 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB5428 4322857eea1c89e0e3b5dc39f7018146 500 Pfam PF07394 Protein of unknown function (DUF1501) 77 499 7.0E-146 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB5428 4322857eea1c89e0e3b5dc39f7018146 500 SUPERFAMILY SSF53649 328 475 2.12E-13 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6364 479a5e5fb3529f37a272aeaa084f6af4 262 Gene3D G3DSA:3.40.50.1820 25 223 5.8E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6364 479a5e5fb3529f37a272aeaa084f6af4 262 Pfam PF12697 Alpha/beta hydrolase family 31 161 5.6E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB6364 479a5e5fb3529f37a272aeaa084f6af4 262 SUPERFAMILY SSF53474 26 209 5.56E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7785 5123758a88578bec72519e7aa3bfa43f 342 Pfam PF11199 Protein of unknown function (DUF2891) 8 331 2.3E-131 T 11-11-2016 IPR021365 Protein of unknown function DUF2891 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 377 488 5.3E-30 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 Gene3D G3DSA:3.50.50.60 173 301 7.9E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 SUPERFAMILY SSF55424 376 494 9.28E-32 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PIRSF PIRSF000350 15 494 6.0E-68 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 SUPERFAMILY SSF51905 31 367 2.47E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 Gene3D G3DSA:3.50.50.60 40 172 1.3E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 Gene3D G3DSA:3.50.50.60 302 367 1.3E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 43 357 7.7E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 309 1.3E-26 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 44 63 1.3E-26 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 209 227 1.3E-26 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 322 344 1.3E-26 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 1.3E-26 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 463 483 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 76 91 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 308 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 209 234 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 65 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 344 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 453 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 182 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 373 394 8.4E-53 T 11-11-2016 RB5717 8750b82b8ebc526ee7db5197592e5fc8 497 Gene3D G3DSA:3.30.390.30 374 491 2.3E-34 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RB5697 b810d2c1c5135f3e2f23cb235db961a5 460 SUPERFAMILY SSF52833 78 247 3.48E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5697 b810d2c1c5135f3e2f23cb235db961a5 460 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RB5697 b810d2c1c5135f3e2f23cb235db961a5 460 Pfam PF00578 AhpC/TSA family 98 242 1.6E-13 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB5697 b810d2c1c5135f3e2f23cb235db961a5 460 Gene3D G3DSA:3.40.30.10 24 42 5.3E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5697 b810d2c1c5135f3e2f23cb235db961a5 460 Gene3D G3DSA:3.40.30.10 201 271 5.3E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5697 b810d2c1c5135f3e2f23cb235db961a5 460 Gene3D G3DSA:3.40.30.10 78 160 5.3E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 Gene3D G3DSA:3.20.20.70 51 530 1.2E-184 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 PIRSF PIRSF000130 45 533 7.4E-212 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 SUPERFAMILY SSF54631 142 247 2.4E-24 T 11-11-2016 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 Pfam PF00571 CBS domain 143 187 2.9E-10 T 11-11-2016 IPR000644 CBS domain RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 Pfam PF00571 CBS domain 197 247 1.2E-5 T 11-11-2016 IPR000644 CBS domain RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 SMART SM01240 54 518 1.3E-287 T 11-11-2016 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 55 518 1.7E-157 T 11-11-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 SUPERFAMILY SSF51412 53 137 9.55E-115 T 11-11-2016 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 SUPERFAMILY SSF51412 263 522 9.55E-115 T 11-11-2016 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 SMART SM00116 204 252 0.22 T 11-11-2016 IPR000644 CBS domain RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 SMART SM00116 143 191 1.0E-6 T 11-11-2016 IPR000644 CBS domain RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 340 352 - T 11-11-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 55 499 1.4E-185 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RB11822 a4e695b51e5e2ed0e767cca5ca86b569 539 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 55 531 84.237 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RB3234 2e20b0f348afb1f785be31785de6192e 314 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 57 299 3.6E-42 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RB3234 2e20b0f348afb1f785be31785de6192e 314 Gene3D G3DSA:2.120.10.30 44 313 7.0E-62 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3234 2e20b0f348afb1f785be31785de6192e 314 SUPERFAMILY SSF63829 33 313 2.78E-59 T 11-11-2016 RB7418 60778211efa6f26e1619aeda9ed11e14 3507 SUPERFAMILY SSF63829 2841 2912 1.5E-6 T 11-11-2016 RB7418 60778211efa6f26e1619aeda9ed11e14 3507 SUPERFAMILY SSF63829 2587 2787 1.5E-6 T 11-11-2016 RB7418 60778211efa6f26e1619aeda9ed11e14 3507 SUPERFAMILY SSF46626 3475 3498 4.8E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7418 60778211efa6f26e1619aeda9ed11e14 3507 SUPERFAMILY SSF46626 3359 3439 4.8E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7418 60778211efa6f26e1619aeda9ed11e14 3507 Pfam PF00034 Cytochrome c 3370 3498 1.8E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7418 60778211efa6f26e1619aeda9ed11e14 3507 Gene3D G3DSA:2.120.10.30 2571 2951 5.3E-11 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB7418 60778211efa6f26e1619aeda9ed11e14 3507 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 2576 2948 5.0E-54 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB7418 60778211efa6f26e1619aeda9ed11e14 3507 Gene3D G3DSA:1.10.760.10 3472 3500 2.1E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7418 60778211efa6f26e1619aeda9ed11e14 3507 Gene3D G3DSA:1.10.760.10 3365 3417 2.1E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7418 60778211efa6f26e1619aeda9ed11e14 3507 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 3368 3498 1.0E-34 T 11-11-2016 IPR013427 Haem-binding domain, putative RB6452 28a6ebae90f654f9719e3e6ed21d7e82 383 Gene3D G3DSA:1.50.10.20 54 376 1.9E-19 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB6452 28a6ebae90f654f9719e3e6ed21d7e82 383 SUPERFAMILY SSF48239 342 380 6.02E-33 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB6452 28a6ebae90f654f9719e3e6ed21d7e82 383 SUPERFAMILY SSF48239 57 299 6.02E-33 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 SUPERFAMILY SSF88946 110 188 2.04E-54 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 SUPERFAMILY SSF88946 299 401 2.04E-54 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Gene3D G3DSA:1.10.10.10 401 454 2.4E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Gene3D G3DSA:1.10.10.10 493 563 9.3E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Pfam PF04539 Sigma-70 region 3 412 484 1.4E-23 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 SUPERFAMILY SSF88659 462 563 8.6E-25 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 2 564 29.361 T 11-11-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 SUPERFAMILY SSF88659 404 477 2.16E-19 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Pfam PF00140 Sigma-70 factor, region 1.2 113 141 4.0E-12 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 330 552 1.2E-32 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 PRINTS PR00046 Major sigma-70 factor signature 524 539 9.1E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 PRINTS PR00046 Major sigma-70 factor signature 539 550 9.1E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 PRINTS PR00046 Major sigma-70 factor signature 379 387 9.1E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 PRINTS PR00046 Major sigma-70 factor signature 355 368 9.1E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 PRINTS PR00046 Major sigma-70 factor signature 503 515 9.1E-27 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Pfam PF04542 Sigma-70 region 2 335 400 2.3E-19 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Gene3D G3DSA:1.10.601.10 127 400 1.4E-66 T 11-11-2016 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Pfam PF03979 Sigma-70 factor, region 1.1 5 62 1.7E-13 T 11-11-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RB6347 9ce4c31a7d0e923ab9596c3e9427c7bb 567 Pfam PF04545 Sigma-70, region 4 499 551 7.9E-16 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9771 bd8806e15831742e9a7a048a440c044f 198 Pfam PF00929 Exonuclease 20 186 9.7E-13 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RB9771 bd8806e15831742e9a7a048a440c044f 198 SMART SM00479 18 195 5.1E-6 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RB9771 bd8806e15831742e9a7a048a440c044f 198 SUPERFAMILY SSF53098 15 193 3.46E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB9771 bd8806e15831742e9a7a048a440c044f 198 Gene3D G3DSA:3.30.420.10 13 194 1.1E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6729 cd2aad25b4ed6df07ad1ca3d3f7a2167 260 SUPERFAMILY SSF51569 23 240 1.47E-68 T 11-11-2016 RB6729 cd2aad25b4ed6df07ad1ca3d3f7a2167 260 Pfam PF01791 DeoC/LacD family aldolase 44 220 1.8E-15 T 11-11-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RB6729 cd2aad25b4ed6df07ad1ca3d3f7a2167 260 Gene3D G3DSA:3.20.20.70 22 242 9.7E-74 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6729 cd2aad25b4ed6df07ad1ca3d3f7a2167 260 SMART SM01133 27 240 5.7E-71 T 11-11-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RB6729 cd2aad25b4ed6df07ad1ca3d3f7a2167 260 PIRSF PIRSF001357 21 247 4.3E-78 T 11-11-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 RB6729 cd2aad25b4ed6df07ad1ca3d3f7a2167 260 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 26 242 27.887 T 11-11-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 RB6729 cd2aad25b4ed6df07ad1ca3d3f7a2167 260 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 28 236 1.5E-59 T 11-11-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-71336 RB12310 41af9552a270d44dfbe529e51bdc5151 758 SUPERFAMILY SSF48452 639 693 1.6E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12310 41af9552a270d44dfbe529e51bdc5151 758 SUPERFAMILY SSF48452 476 549 1.6E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12310 41af9552a270d44dfbe529e51bdc5151 758 SUPERFAMILY SSF56112 84 404 3.24E-66 T 11-11-2016 IPR011009 Protein kinase-like domain RB12310 41af9552a270d44dfbe529e51bdc5151 758 SMART SM00220 89 387 3.6E-63 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB12310 41af9552a270d44dfbe529e51bdc5151 758 Gene3D G3DSA:1.25.40.10 476 577 3.8E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12310 41af9552a270d44dfbe529e51bdc5151 758 Gene3D G3DSA:1.25.40.10 635 693 3.8E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12310 41af9552a270d44dfbe529e51bdc5151 758 Pfam PF00069 Protein kinase domain 89 381 1.3E-46 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB12310 41af9552a270d44dfbe529e51bdc5151 758 Gene3D G3DSA:1.10.510.10 133 401 2.9E-46 T 11-11-2016 RB12310 41af9552a270d44dfbe529e51bdc5151 758 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 208 220 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB3550 247b74cb6d8e661e89275911fdb70e94 317 Gene3D G3DSA:3.40.50.1820 84 309 3.0E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3550 247b74cb6d8e661e89275911fdb70e94 317 SUPERFAMILY SSF53474 93 311 3.39E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3550 247b74cb6d8e661e89275911fdb70e94 317 Pfam PF07859 alpha/beta hydrolase fold 137 234 5.3E-9 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB3550 247b74cb6d8e661e89275911fdb70e94 317 Pfam PF01738 Dienelactone hydrolase family 244 309 3.3E-4 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 RB11162 b32de7594808c6dbc331ff19eb395dbd 638 SUPERFAMILY SSF49785 504 637 1.23E-28 T 11-11-2016 IPR008979 Galactose-binding domain-like RB11162 b32de7594808c6dbc331ff19eb395dbd 638 SMART SM00776 501 638 3.7E-57 T 11-11-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module RB11162 b32de7594808c6dbc331ff19eb395dbd 638 Pfam PF08305 NPCBM/NEW2 domain 504 637 8.9E-30 T 11-11-2016 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module RB9326 e7d298439ef7fcc973d48e57bc744d13 310 SUPERFAMILY SSF53098 6 231 3.23E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB9326 e7d298439ef7fcc973d48e57bc744d13 310 Gene3D G3DSA:3.30.420.10 94 215 8.3E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB9326 e7d298439ef7fcc973d48e57bc744d13 310 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 50 259 1.2E-67 T 11-11-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like RB2490 4347775fc99487ec50fd76a6d917288d 43 Pfam PF05050 Methyltransferase FkbM domain 2 35 1.2E-4 T 11-11-2016 IPR006342 Methyltransferase FkbM RB2490 4347775fc99487ec50fd76a6d917288d 43 Gene3D G3DSA:3.40.50.150 2 34 7.3E-9 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2490 4347775fc99487ec50fd76a6d917288d 43 SUPERFAMILY SSF53335 2 35 1.59E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB5332 1e96b3fb6a451418acfee0d6fb959b1a 207 SUPERFAMILY SSF56300 2 198 1.52E-36 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5332 1e96b3fb6a451418acfee0d6fb959b1a 207 Gene3D G3DSA:3.60.21.10 2 198 1.2E-24 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5332 1e96b3fb6a451418acfee0d6fb959b1a 207 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 197 1.7E-12 T 11-11-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RB295 32e69a7653157d8d0a49151d4df7938d 426 SMART SM00852 201 348 2.4E-35 T 11-11-2016 IPR001453 MoaB/Mog domain RB295 32e69a7653157d8d0a49151d4df7938d 426 Gene3D G3DSA:3.40.980.10 183 355 9.0E-42 T 11-11-2016 IPR001453 MoaB/Mog domain RB295 32e69a7653157d8d0a49151d4df7938d 426 Gene3D G3DSA:2.170.190.11 59 154 3.8E-19 T 11-11-2016 RB295 32e69a7653157d8d0a49151d4df7938d 426 SUPERFAMILY SSF63882 11 196 1.7E-33 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB295 32e69a7653157d8d0a49151d4df7938d 426 Pfam PF00994 Probable molybdopterin binding domain 201 347 6.0E-25 T 11-11-2016 IPR001453 MoaB/Mog domain RB295 32e69a7653157d8d0a49151d4df7938d 426 SUPERFAMILY SSF53218 198 355 2.62E-32 T 11-11-2016 IPR001453 MoaB/Mog domain RB295 32e69a7653157d8d0a49151d4df7938d 426 Pfam PF03453 MoeA N-terminal region (domain I and II) 14 188 6.0E-25 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB295 32e69a7653157d8d0a49151d4df7938d 426 Gene3D G3DSA:3.90.105.10 155 182 3.2E-8 T 11-11-2016 RB10512 260edfb080fd8fc3881320ae9894ec57 903 SMART SM00460 554 641 7.6E-15 T 11-11-2016 IPR002931 Transglutaminase-like RB10512 260edfb080fd8fc3881320ae9894ec57 903 Pfam PF11992 Domain of unknown function (DUF3488) 62 369 1.7E-18 T 11-11-2016 IPR021878 Protein of unknown function DUF3488 RB10512 260edfb080fd8fc3881320ae9894ec57 903 Pfam PF01841 Transglutaminase-like superfamily 516 639 3.0E-17 T 11-11-2016 IPR002931 Transglutaminase-like RB10512 260edfb080fd8fc3881320ae9894ec57 903 Pfam PF13559 Domain of unknown function (DUF4129) 767 848 2.6E-8 T 11-11-2016 IPR025403 Domain of unknown function DUF4129 RB10512 260edfb080fd8fc3881320ae9894ec57 903 SUPERFAMILY SSF54001 482 678 9.53E-34 T 11-11-2016 RB10512 260edfb080fd8fc3881320ae9894ec57 903 Gene3D G3DSA:3.90.260.10 512 642 1.9E-26 T 11-11-2016 IPR002931 Transglutaminase-like RB981 ceff8d0423bcb9786a7db305700959db 435 Gene3D G3DSA:2.30.40.10 34 150 9.4E-21 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB981 ceff8d0423bcb9786a7db305700959db 435 SUPERFAMILY SSF51338 40 105 1.02E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB981 ceff8d0423bcb9786a7db305700959db 435 Pfam PF01979 Amidohydrolase family 351 416 1.4E-6 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB981 ceff8d0423bcb9786a7db305700959db 435 SUPERFAMILY SSF51556 92 385 3.63E-13 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB981 ceff8d0423bcb9786a7db305700959db 435 Gene3D G3DSA:2.30.40.10 320 410 3.7E-13 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB5300 7b3b1d8c407de8615ea60834eb8b2659 400 Gene3D G3DSA:3.40.50.1110 208 396 8.1E-9 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB5300 7b3b1d8c407de8615ea60834eb8b2659 400 Pfam PF14607 N-terminus of Esterase_SGNH_hydro-type 65 210 3.0E-46 T 11-11-2016 IPR032740 SGNH hydrolase-type esterase, N-terminal RB5300 7b3b1d8c407de8615ea60834eb8b2659 400 Pfam PF14606 GDSL-like Lipase/Acylhydrolase family 217 394 5.6E-71 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB5300 7b3b1d8c407de8615ea60834eb8b2659 400 SUPERFAMILY SSF52266 213 395 5.66E-14 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB9748 91c116a7008cbf684edba55d415e0144 366 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 365 8.3E-83 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB9748 91c116a7008cbf684edba55d415e0144 366 Pfam PF01180 Dihydroorotate dehydrogenase 51 349 1.2E-61 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RB9748 91c116a7008cbf684edba55d415e0144 366 SUPERFAMILY SSF51395 3 365 1.71E-75 T 11-11-2016 RB9748 91c116a7008cbf684edba55d415e0144 366 Gene3D G3DSA:3.20.20.70 2 365 8.2E-99 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB10921 9f887b3820a367ec666c5cb34f16b012 284 SUPERFAMILY SSF51621 11 204 4.08E-79 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB10921 9f887b3820a367ec666c5cb34f16b012 284 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 16 279 2.2E-124 T 11-11-2016 IPR009215 TIM-barrel domain, IGPS-like RB10921 9f887b3820a367ec666c5cb34f16b012 284 PIRSF PIRSF034452 8 283 2.5E-137 T 11-11-2016 IPR009215 TIM-barrel domain, IGPS-like RB10921 9f887b3820a367ec666c5cb34f16b012 284 Gene3D G3DSA:1.20.5.460 259 273 2.2E-5 T 11-11-2016 RB10921 9f887b3820a367ec666c5cb34f16b012 284 Gene3D G3DSA:3.20.20.70 8 258 1.4E-121 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB5736 1ba63cd900dc0c9686e440a9def56aac 258 Gene3D G3DSA:1.10.10.10 200 252 3.1E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB5736 1ba63cd900dc0c9686e440a9def56aac 258 SMART SM00421 192 249 0.0024 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB5736 1ba63cd900dc0c9686e440a9def56aac 258 SUPERFAMILY SSF46894 194 252 5.44E-7 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB4123 7f242a4c8457eccf9338e53c0762846e 148 Gene3D G3DSA:2.60.120.10 50 139 1.1E-39 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB4123 7f242a4c8457eccf9338e53c0762846e 148 Pfam PF07883 Cupin domain 73 137 6.1E-11 T 11-11-2016 IPR013096 Cupin 2, conserved barrel RB4123 7f242a4c8457eccf9338e53c0762846e 148 SUPERFAMILY SSF51182 37 137 5.61E-20 T 11-11-2016 IPR011051 RmlC-like cupin domain RB12202 0e93c53dff58341ff14d7311aa450e7e 541 Gene3D G3DSA:1.10.443.10 236 258 5.7E-29 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB12202 0e93c53dff58341ff14d7311aa450e7e 541 Gene3D G3DSA:1.10.443.10 290 447 5.7E-29 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB12202 0e93c53dff58341ff14d7311aa450e7e 541 SUPERFAMILY SSF56349 291 443 2.55E-29 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB12202 0e93c53dff58341ff14d7311aa450e7e 541 SUPERFAMILY SSF56349 119 260 2.55E-29 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB12202 0e93c53dff58341ff14d7311aa450e7e 541 Pfam PF00589 Phage integrase family 291 434 4.7E-19 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB8686 6353553a81cebe529b18d618b151662b 360 SMART SM00922 148 239 8.1E-15 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RB8686 6353553a81cebe529b18d618b151662b 360 SUPERFAMILY SSF51604 138 346 6.94E-47 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB8686 6353553a81cebe529b18d618b151662b 360 SUPERFAMILY SSF54826 13 130 1.35E-22 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8686 6353553a81cebe529b18d618b151662b 360 Gene3D G3DSA:3.20.20.120 142 337 2.4E-51 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB8686 6353553a81cebe529b18d618b151662b 360 Pfam PF13378 Enolase C-terminal domain-like 152 349 2.6E-29 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB8686 6353553a81cebe529b18d618b151662b 360 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 127 1.5E-9 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RB8686 6353553a81cebe529b18d618b151662b 360 Gene3D G3DSA:3.30.390.10 13 141 7.0E-27 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB1805 06b0a468878ac6a06daacc4deaaad075 951 SUPERFAMILY SSF52317 670 750 2.52E-19 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB1805 06b0a468878ac6a06daacc4deaaad075 951 SUPERFAMILY SSF52317 484 634 2.52E-19 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB1805 06b0a468878ac6a06daacc4deaaad075 951 Gene3D G3DSA:3.40.50.410 309 367 2.3E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB1805 06b0a468878ac6a06daacc4deaaad075 951 Gene3D G3DSA:3.40.50.410 869 905 2.3E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB1805 06b0a468878ac6a06daacc4deaaad075 951 Gene3D G3DSA:3.40.50.880 477 751 3.4E-20 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB1805 06b0a468878ac6a06daacc4deaaad075 951 SUPERFAMILY SSF53300 290 367 2.78E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB1805 06b0a468878ac6a06daacc4deaaad075 951 SUPERFAMILY SSF53300 84 145 2.78E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9238 82f792155009326ed696f4176219e8c0 316 Pfam PF01531 Glycosyl transferase family 11 33 314 1.8E-29 T 11-11-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69 RB9546 3e4b263dc5c799285c75138b86fca9f5 276 Gene3D G3DSA:3.40.50.1820 47 274 2.3E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9546 3e4b263dc5c799285c75138b86fca9f5 276 Pfam PF01738 Dienelactone hydrolase family 146 253 5.7E-12 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 RB9546 3e4b263dc5c799285c75138b86fca9f5 276 SUPERFAMILY SSF53474 65 273 1.95E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8548 c24585cd0e8543b8db53d503f9197b2c 175 SUPERFAMILY SSF51230 96 171 2.09E-20 T 11-11-2016 IPR011053 Single hybrid motif RB8548 c24585cd0e8543b8db53d503f9197b2c 175 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 128 145 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB8548 c24585cd0e8543b8db53d503f9197b2c 175 Pfam PF00364 Biotin-requiring enzyme 98 170 1.2E-19 T 11-11-2016 IPR000089 Biotin/lipoyl attachment RB8548 c24585cd0e8543b8db53d503f9197b2c 175 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 118 132 1.6E-13 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RB8548 c24585cd0e8543b8db53d503f9197b2c 175 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 114 1.6E-13 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RB8548 c24585cd0e8543b8db53d503f9197b2c 175 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 133 146 1.6E-13 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RB8548 c24585cd0e8543b8db53d503f9197b2c 175 Gene3D G3DSA:2.40.50.100 97 171 6.4E-25 T 11-11-2016 RB8548 c24585cd0e8543b8db53d503f9197b2c 175 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 22 172 1.3E-41 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RB11049 3d07a953b92f7261de79040690694157 74 Gene3D G3DSA:3.30.450.40 4 69 1.0E-4 T 11-11-2016 IPR029016 GAF domain-like RB297 c93dd9b1b01b72ee31b3a6240d74005b 529 TIGRFAM TIGR00836 amt: ammonium transporter 109 526 9.1E-131 T 11-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RB297 c93dd9b1b01b72ee31b3a6240d74005b 529 SUPERFAMILY SSF111352 107 507 1.57E-121 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RB297 c93dd9b1b01b72ee31b3a6240d74005b 529 ProSitePatterns PS01219 Ammonium transporters signature. 276 301 - T 11-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RB297 c93dd9b1b01b72ee31b3a6240d74005b 529 Gene3D G3DSA:1.10.3430.10 104 507 9.2E-133 T 11-11-2016 IPR029020 Ammonium/urea transporter RB297 c93dd9b1b01b72ee31b3a6240d74005b 529 Pfam PF00909 Ammonium Transporter Family 110 526 6.9E-117 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RB6852 81f1f09bacd9f75ea3851dfc5a1460ce 410 SUPERFAMILY SSF54523 11 167 6.04E-29 T 11-11-2016 RB6852 81f1f09bacd9f75ea3851dfc5a1460ce 410 Pfam PF07596 Protein of unknown function (DUF1559) 35 365 3.2E-81 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6852 81f1f09bacd9f75ea3851dfc5a1460ce 410 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 2.5E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6852 81f1f09bacd9f75ea3851dfc5a1460ce 410 Gene3D G3DSA:3.30.700.10 11 68 1.9E-6 T 11-11-2016 RB6852 81f1f09bacd9f75ea3851dfc5a1460ce 410 Pfam PF13633 Prokaryotic N-terminal methylation site 9 34 1.3E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6240 93cae42a808dff16d29e939658c9a8cd 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 4.8E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6240 93cae42a808dff16d29e939658c9a8cd 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 4.8E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6240 93cae42a808dff16d29e939658c9a8cd 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 4.8E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6240 93cae42a808dff16d29e939658c9a8cd 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.8E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6240 93cae42a808dff16d29e939658c9a8cd 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 4.8E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6240 93cae42a808dff16d29e939658c9a8cd 280 SUPERFAMILY SSF51735 10 266 3.07E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6240 93cae42a808dff16d29e939658c9a8cd 280 Gene3D G3DSA:3.40.50.720 10 267 6.1E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6240 93cae42a808dff16d29e939658c9a8cd 280 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 266 2.5E-36 T 11-11-2016 RB12087 fe2f6eb97530b7941710430cd363ee08 587 SUPERFAMILY SSF143975 29 407 1.7E-138 T 11-11-2016 RB12087 fe2f6eb97530b7941710430cd363ee08 587 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 49 586 5.6E-227 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB12087 fe2f6eb97530b7941710430cd363ee08 587 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 494 505 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB12087 fe2f6eb97530b7941710430cd363ee08 587 Pfam PF00920 Dehydratase family 65 583 1.5E-220 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB12087 fe2f6eb97530b7941710430cd363ee08 587 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 153 163 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB12087 fe2f6eb97530b7941710430cd363ee08 587 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 35 586 42.623 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB12087 fe2f6eb97530b7941710430cd363ee08 587 SUPERFAMILY SSF52016 409 586 4.08E-58 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RB693 1e6b00a861a3c5c99714aaa156d04df4 260 Gene3D G3DSA:3.30.70.1290 147 234 5.3E-15 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB693 1e6b00a861a3c5c99714aaa156d04df4 260 Pfam PF01797 Transposase IS200 like 160 231 3.5E-8 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB693 1e6b00a861a3c5c99714aaa156d04df4 260 SMART SM01321 68 231 6.6E-11 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB693 1e6b00a861a3c5c99714aaa156d04df4 260 SUPERFAMILY SSF143422 132 237 2.09E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB8173 1a6fad7d54d95b1ce13aaac5f6871e71 339 Gene3D G3DSA:1.10.8.300 219 334 1.0E-31 T 11-11-2016 RB8173 1a6fad7d54d95b1ce13aaac5f6871e71 339 Gene3D G3DSA:3.40.50.300 36 203 1.4E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8173 1a6fad7d54d95b1ce13aaac5f6871e71 339 PIRSF PIRSF002849 2 339 2.8E-118 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB8173 1a6fad7d54d95b1ce13aaac5f6871e71 339 SUPERFAMILY SSF52540 25 310 1.69E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8173 1a6fad7d54d95b1ce13aaac5f6871e71 339 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 55 188 1.9E-63 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB4737 07f56b8ec0dce8177eb017890752d246 366 Pfam PF01791 DeoC/LacD family aldolase 86 342 2.0E-62 T 11-11-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RB4737 07f56b8ec0dce8177eb017890752d246 366 Gene3D G3DSA:3.20.20.70 68 361 2.4E-98 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB4737 07f56b8ec0dce8177eb017890752d246 366 SMART SM01133 85 342 5.2E-39 T 11-11-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-71336 RB4737 07f56b8ec0dce8177eb017890752d246 366 SUPERFAMILY SSF51569 70 258 2.69E-64 T 11-11-2016 RB4737 07f56b8ec0dce8177eb017890752d246 366 SUPERFAMILY SSF51569 286 360 2.69E-64 T 11-11-2016 RB8223 8f1f8a9f31f92f347f92ad4b1f20627f 410 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 27 47 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8223 8f1f8a9f31f92f347f92ad4b1f20627f 410 Pfam PF13633 Prokaryotic N-terminal methylation site 27 52 2.8E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8223 8f1f8a9f31f92f347f92ad4b1f20627f 410 SUPERFAMILY SSF54523 29 175 6.2E-27 T 11-11-2016 RB8223 8f1f8a9f31f92f347f92ad4b1f20627f 410 Pfam PF07596 Protein of unknown function (DUF1559) 53 368 7.7E-62 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8223 8f1f8a9f31f92f347f92ad4b1f20627f 410 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 27 48 6.7E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8223 8f1f8a9f31f92f347f92ad4b1f20627f 410 Gene3D G3DSA:3.30.700.10 29 91 1.9E-7 T 11-11-2016 RB2166 6ab1df3776039ff16a3c9039da647851 474 Gene3D G3DSA:3.20.20.120 245 473 2.4E-16 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB2166 6ab1df3776039ff16a3c9039da647851 474 SUPERFAMILY SSF51604 239 473 1.12E-17 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB2166 6ab1df3776039ff16a3c9039da647851 474 Pfam PF13378 Enolase C-terminal domain-like 247 473 1.4E-11 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB7945 c7bc78af0472ac26863c4ad914024739 231 Gene3D G3DSA:3.40.50.150 4 190 9.3E-41 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB7945 c7bc78af0472ac26863c4ad914024739 231 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 191 20.78 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RB7945 c7bc78af0472ac26863c4ad914024739 231 Pfam PF02527 rRNA small subunit methyltransferase G 24 185 1.4E-34 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RB7945 c7bc78af0472ac26863c4ad914024739 231 SUPERFAMILY SSF53335 2 178 2.01E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB7945 c7bc78af0472ac26863c4ad914024739 231 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 182 1.6E-31 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RB7945 c7bc78af0472ac26863c4ad914024739 231 PIRSF PIRSF003078 1 208 6.0E-53 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 2.0E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 2.0E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 2.0E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 2.0E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 27 44 2.0E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 102 113 2.0E-37 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 Gene3D G3DSA:3.40.50.720 14 264 2.7E-77 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 SUPERFAMILY SSF51735 25 264 2.01E-75 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 264 3.3E-58 T 11-11-2016 RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 1.3E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 192 1.3E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11488 6b938f39d7b1114e4f9b75fca06bb7de 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 102 113 1.3E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6634 133b1f23a6141fcdbe50cc92f412d829 365 SUPERFAMILY SSF54523 64 188 4.63E-20 T 11-11-2016 RB6634 133b1f23a6141fcdbe50cc92f412d829 365 Pfam PF07596 Protein of unknown function (DUF1559) 88 346 2.3E-69 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6634 133b1f23a6141fcdbe50cc92f412d829 365 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 62 82 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6634 133b1f23a6141fcdbe50cc92f412d829 365 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 58 82 6.0E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6634 133b1f23a6141fcdbe50cc92f412d829 365 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 61 83 1.1E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6634 133b1f23a6141fcdbe50cc92f412d829 365 Gene3D G3DSA:3.30.700.10 64 113 2.9E-6 T 11-11-2016 RB3256 78c7ddd3cf9fda7913f63f0fb1b59f48 140 Pfam PF14101 Domain of unknown function (DUF4275) 49 135 1.3E-9 T 11-11-2016 IPR025454 Protein of unknown function DUF4275 RB10599 64d473a921c1780b14bdba4f79b63c99 553 Pfam PF00884 Sulfatase 58 394 3.2E-62 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10599 64d473a921c1780b14bdba4f79b63c99 553 Pfam PF16347 Domain of unknown function (DUF4976) 403 496 3.6E-7 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB10599 64d473a921c1780b14bdba4f79b63c99 553 Gene3D G3DSA:3.40.720.10 55 418 1.1E-94 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB10599 64d473a921c1780b14bdba4f79b63c99 553 ProSitePatterns PS00149 Sulfatases signature 2. 166 176 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB10599 64d473a921c1780b14bdba4f79b63c99 553 SUPERFAMILY SSF53649 56 499 5.89E-116 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10599 64d473a921c1780b14bdba4f79b63c99 553 Gene3D G3DSA:3.30.1120.10 424 504 1.2E-20 T 11-11-2016 RB2971 5ad4fafa446f1d9d6315fabc55b72504 346 SUPERFAMILY SSF51658 81 336 6.63E-40 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB2971 5ad4fafa446f1d9d6315fabc55b72504 346 Gene3D G3DSA:3.20.20.150 103 344 2.0E-51 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB2971 5ad4fafa446f1d9d6315fabc55b72504 346 Pfam PF01261 Xylose isomerase-like TIM barrel 111 293 3.7E-29 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12604 10f67d5c7f31e3094cd76b8507d1339e 468 Gene3D G3DSA:3.40.50.2000 225 432 1.2E-8 T 11-11-2016 RB12604 10f67d5c7f31e3094cd76b8507d1339e 468 Pfam PF13692 Glycosyl transferases group 1 247 380 3.5E-10 T 11-11-2016 RB12604 10f67d5c7f31e3094cd76b8507d1339e 468 SUPERFAMILY SSF53756 105 457 5.08E-36 T 11-11-2016 RB12604 10f67d5c7f31e3094cd76b8507d1339e 468 Pfam PF13579 Glycosyl transferase 4-like domain 110 225 8.8E-9 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB322 18f97bc8112e0ac1fde79859fa68da83 334 Pfam PF13437 HlyD family secretion protein 210 315 5.2E-7 T 11-11-2016 RB322 18f97bc8112e0ac1fde79859fa68da83 334 SUPERFAMILY SSF111369 186 318 3.4E-18 T 11-11-2016 RB322 18f97bc8112e0ac1fde79859fa68da83 334 SUPERFAMILY SSF111369 71 151 3.4E-18 T 11-11-2016 RB322 18f97bc8112e0ac1fde79859fa68da83 334 Gene3D G3DSA:2.40.50.100 207 239 3.9E-13 T 11-11-2016 RB322 18f97bc8112e0ac1fde79859fa68da83 334 Gene3D G3DSA:2.40.50.100 72 103 3.9E-13 T 11-11-2016 RB322 18f97bc8112e0ac1fde79859fa68da83 334 Pfam PF13533 Biotin-lipoyl like 72 117 1.5E-9 T 11-11-2016 RB1005 71f74e6b0adcac7c7dfdfc608b3f39e6 478 SUPERFAMILY SSF53448 134 478 7.59E-63 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB10734 8f6b52222cdf1945c7e0ddb5909d3295 277 Pfam PF13365 Trypsin-like peptidase domain 90 245 2.6E-6 T 11-11-2016 RB10734 8f6b52222cdf1945c7e0ddb5909d3295 277 SUPERFAMILY SSF50494 141 267 6.82E-8 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB10734 8f6b52222cdf1945c7e0ddb5909d3295 277 SUPERFAMILY SSF50494 46 104 6.82E-8 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB5847 98f2405ea4279570d7ec4b0ad48cef86 206 Gene3D G3DSA:3.40.50.2020 16 186 7.2E-63 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB5847 98f2405ea4279570d7ec4b0ad48cef86 206 SUPERFAMILY SSF53271 12 184 3.28E-51 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB5847 98f2405ea4279570d7ec4b0ad48cef86 206 Pfam PF00156 Phosphoribosyl transferase domain 51 164 8.5E-18 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RB5847 98f2405ea4279570d7ec4b0ad48cef86 206 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 19 186 2.4E-65 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 RB5847 98f2405ea4279570d7ec4b0ad48cef86 206 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 19 186 36.603 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 RB5514 a707388761eb4d84210ff573f0dd1e8d 369 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 27 47 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5514 a707388761eb4d84210ff573f0dd1e8d 369 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 26 48 1.2E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB10845 b8736ea7f08b611616915707f0f609b4 313 SUPERFAMILY SSF53474 86 302 1.47E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10845 b8736ea7f08b611616915707f0f609b4 313 Gene3D G3DSA:3.40.50.1820 90 304 3.7E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9640 2991f73980be4c26801904b477ea433d 424 Gene3D G3DSA:3.90.550.10 46 265 5.2E-13 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9640 2991f73980be4c26801904b477ea433d 424 SUPERFAMILY SSF53448 35 291 3.38E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9640 2991f73980be4c26801904b477ea433d 424 Pfam PF13506 Glycosyl transferase family 21 116 278 4.0E-15 T 11-11-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|Reactome: R-HSA-1660662 RB12116 3c2173d125d3d03075845b7dd2bf9b84 355 SUPERFAMILY SSF52113 264 351 2.45E-11 T 11-11-2016 IPR001357 BRCT domain RB12116 3c2173d125d3d03075845b7dd2bf9b84 355 Pfam PF00929 Exonuclease 5 156 1.3E-19 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RB12116 3c2173d125d3d03075845b7dd2bf9b84 355 SMART SM00479 2 166 5.9E-18 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RB12116 3c2173d125d3d03075845b7dd2bf9b84 355 Gene3D G3DSA:3.40.50.10190 264 353 6.6E-16 T 11-11-2016 IPR001357 BRCT domain RB12116 3c2173d125d3d03075845b7dd2bf9b84 355 SUPERFAMILY SSF53098 1 165 1.14E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12116 3c2173d125d3d03075845b7dd2bf9b84 355 SMART SM00292 263 355 0.0038 T 11-11-2016 IPR001357 BRCT domain RB12116 3c2173d125d3d03075845b7dd2bf9b84 355 Gene3D G3DSA:3.30.420.10 1 167 5.2E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12116 3c2173d125d3d03075845b7dd2bf9b84 355 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 265 318 3.0E-10 T 11-11-2016 IPR001357 BRCT domain RB10249 92a847cc28fcda07b8e73e8ac972cc40 493 Gene3D G3DSA:2.30.42.10 269 351 3.6E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB10249 92a847cc28fcda07b8e73e8ac972cc40 493 Gene3D G3DSA:2.30.42.10 131 199 3.2E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB10249 92a847cc28fcda07b8e73e8ac972cc40 493 SUPERFAMILY SSF50156 269 349 9.73E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB10249 92a847cc28fcda07b8e73e8ac972cc40 493 Pfam PF13180 PDZ domain 270 350 1.4E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB10249 92a847cc28fcda07b8e73e8ac972cc40 493 SUPERFAMILY SSF50156 127 198 7.62E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB10249 92a847cc28fcda07b8e73e8ac972cc40 493 SMART SM00228 117 195 1.3E-4 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB10249 92a847cc28fcda07b8e73e8ac972cc40 493 SMART SM00228 270 342 7.6E-5 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Gene3D G3DSA:3.30.470.20 260 357 6.4E-38 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB1998 1da5df353de24cde6cecc19a7832d92f 890 SUPERFAMILY SSF56059 9 394 3.41E-135 T 11-11-2016 RB1998 1da5df353de24cde6cecc19a7832d92f 890 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 778 796 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Gene3D G3DSA:3.30.1490.20 210 259 1.4E-52 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Gene3D G3DSA:3.30.1490.20 10 121 1.4E-52 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Gene3D G3DSA:3.50.30.10 417 522 5.8E-37 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB1998 1da5df353de24cde6cecc19a7832d92f 890 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 10 888 0.0 T 11-11-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Gene3D G3DSA:1.20.80.30 122 208 1.3E-35 T 11-11-2016 RB1998 1da5df353de24cde6cecc19a7832d92f 890 SUPERFAMILY SSF51621 528 889 1.65E-127 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Gene3D G3DSA:1.10.189.10 359 416 6.3E-24 T 11-11-2016 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 28 307 1.3E-43 T 11-11-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 314 372 1.2E-12 T 11-11-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Pfam PF00391 PEP-utilising enzyme, mobile domain 438 519 1.9E-24 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Gene3D G3DSA:3.20.20.60 548 889 4.7E-140 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB1998 1da5df353de24cde6cecc19a7832d92f 890 PIRSF PIRSF000853 8 890 0.0 T 11-11-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RB1998 1da5df353de24cde6cecc19a7832d92f 890 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 466 477 - T 11-11-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RB1998 1da5df353de24cde6cecc19a7832d92f 890 SUPERFAMILY SSF52009 403 528 9.42E-35 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RB1998 1da5df353de24cde6cecc19a7832d92f 890 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 533 886 1.3E-90 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RB1641 48323ce82eecf99c0839a57d416d063a 339 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 15 327 1.5E-71 T 11-11-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 RB1641 48323ce82eecf99c0839a57d416d063a 339 Pfam PF01699 Sodium/calcium exchanger protein 13 151 1.2E-24 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RB1641 48323ce82eecf99c0839a57d416d063a 339 Pfam PF01699 Sodium/calcium exchanger protein 190 332 3.6E-26 T 11-11-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RB12541 3fb61ab615c956cbd4b0d1729ca99187 491 Pfam PF08534 Redoxin 344 473 1.1E-11 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RB12541 3fb61ab615c956cbd4b0d1729ca99187 491 Gene3D G3DSA:3.40.30.10 320 489 5.6E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12541 3fb61ab615c956cbd4b0d1729ca99187 491 SUPERFAMILY SSF52833 325 489 3.35E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold RB1588 5135ad35ba8e1910cec0ae7b3a5fc607 151 Pfam PF00550 Phosphopantetheine attachment site 73 131 3.0E-6 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB1588 5135ad35ba8e1910cec0ae7b3a5fc607 151 Gene3D G3DSA:1.10.1200.10 72 146 3.8E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB1588 5135ad35ba8e1910cec0ae7b3a5fc607 151 SUPERFAMILY SSF47336 68 148 9.21E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB6671 c01e63c68715024684ef0df8a35f454e 281 SUPERFAMILY SSF48452 2 152 6.07E-26 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 SUPERFAMILY SSF48452 159 235 2.39E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 SUPERFAMILY SSF48452 86 126 2.39E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 SMART SM00028 169 202 260.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 SMART SM00028 58 91 17.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 SMART SM00028 203 236 130.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 SMART SM00028 24 57 51.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 SMART SM00028 92 125 0.007 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 Pfam PF13432 Tetratricopeptide repeat 1 58 8.4E-6 T 11-11-2016 RB6671 c01e63c68715024684ef0df8a35f454e 281 Gene3D G3DSA:1.25.40.10 1 235 6.1E-40 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6671 c01e63c68715024684ef0df8a35f454e 281 Pfam PF13429 Tetratricopeptide repeat 92 229 1.1E-6 T 11-11-2016 RB356 36bc924ab32a1808d4558a046bb93a25 369 Pfam PF13557 Putative MetA-pathway of phenol degradation 153 332 3.6E-6 T 11-11-2016 IPR025737 MetA-pathway of phenol degradation, putative RB10145 caf82f3fabc67184d6e9b1570f43dd24 464 Gene3D G3DSA:2.120.10.30 60 219 1.1E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB10145 caf82f3fabc67184d6e9b1570f43dd24 464 SUPERFAMILY SSF50974 14 223 4.97E-15 T 11-11-2016 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 RB8531 f7e2972769d5c1b85f9ac23f40b19d15 404 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 32 394 18.0 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RB8531 f7e2972769d5c1b85f9ac23f40b19d15 404 ProSitePatterns PS01218 TatC family signature. 308 327 - T 11-11-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site RB8531 f7e2972769d5c1b85f9ac23f40b19d15 404 Pfam PF00902 Sec-independent protein translocase protein (TatC) 45 375 7.2E-66 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RB8531 f7e2972769d5c1b85f9ac23f40b19d15 404 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 209 380 8.4E-42 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RB12344 5825f7b95f967bdba13411662159c3dd 425 SUPERFAMILY SSF53756 9 415 3.92E-32 T 11-11-2016 RB12344 5825f7b95f967bdba13411662159c3dd 425 Pfam PF00534 Glycosyl transferases group 1 311 391 8.1E-7 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB12344 5825f7b95f967bdba13411662159c3dd 425 Gene3D G3DSA:3.40.50.2000 216 391 4.2E-11 T 11-11-2016 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 Pfam PF00460 Flagella basal body rod protein 29 58 1.3E-8 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 SUPERFAMILY SSF64518 191 311 6.93E-18 T 11-11-2016 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 SUPERFAMILY SSF64518 352 582 6.93E-18 T 11-11-2016 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 28 362 1.7E-88 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 35 55 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site RB10644 487a246fd08e6c347453283ebd3e3ed3 584 PRINTS PR01005 Flagellar hook-associated protein signature 504 525 3.9E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 PRINTS PR01005 Flagellar hook-associated protein signature 35 58 3.9E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 PRINTS PR01005 Flagellar hook-associated protein signature 181 205 3.9E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 PRINTS PR01005 Flagellar hook-associated protein signature 148 168 3.9E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 PRINTS PR01005 Flagellar hook-associated protein signature 551 575 3.9E-12 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 RB10644 487a246fd08e6c347453283ebd3e3ed3 584 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 530 582 1.5E-12 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RB1196 4f36326470bdf0b44472d0d73c445c02 165 SUPERFAMILY SSF55729 17 147 3.04E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB1196 4f36326470bdf0b44472d0d73c445c02 165 Gene3D G3DSA:3.40.630.30 1 150 2.9E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB1196 4f36326470bdf0b44472d0d73c445c02 165 Pfam PF00583 Acetyltransferase (GNAT) family 60 143 8.6E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB3670 9c1223297d523acc5e5660c0f7570955 153 Pfam PF00665 Integrase core domain 4 112 1.0E-24 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB3670 9c1223297d523acc5e5660c0f7570955 153 Gene3D G3DSA:3.30.420.10 6 148 3.9E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB3670 9c1223297d523acc5e5660c0f7570955 153 SUPERFAMILY SSF53098 5 148 1.06E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB6669 8f1e54c468d3d892376131b55e40becc 1784 Gene3D G3DSA:3.40.50.300 1292 1428 1.8E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6669 8f1e54c468d3d892376131b55e40becc 1784 SMART SM00382 1299 1448 5.4E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6669 8f1e54c468d3d892376131b55e40becc 1784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 1303 1348 1.1E-4 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB6669 8f1e54c468d3d892376131b55e40becc 1784 SUPERFAMILY SSF52540 1223 1262 7.53E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6669 8f1e54c468d3d892376131b55e40becc 1784 SUPERFAMILY SSF52540 1300 1513 7.53E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6669 8f1e54c468d3d892376131b55e40becc 1784 Pfam PF12458 ATPase involved in DNA repair 51 489 2.1E-190 T 11-11-2016 IPR020958 DUF3686 RB7482 7f6d00109e5549a58adf342d25f243fc 351 Gene3D G3DSA:3.40.50.720 1 229 1.0E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7482 7f6d00109e5549a58adf342d25f243fc 351 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 273 4.9E-34 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB7482 7f6d00109e5549a58adf342d25f243fc 351 SUPERFAMILY SSF51735 1 342 2.7E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7482 7f6d00109e5549a58adf342d25f243fc 351 Gene3D G3DSA:3.90.25.10 230 342 1.1E-18 T 11-11-2016 RB316 3ae45989e375d8155a29600778bb239f 252 SUPERFAMILY SSF51735 10 250 1.0E-91 T 11-11-2016 IPR016040 NAD(P)-binding domain RB316 3ae45989e375d8155a29600778bb239f 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.7E-49 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.7E-49 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.7E-49 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.7E-49 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.7E-49 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.7E-49 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 5.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 5.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 5.2E-15 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB316 3ae45989e375d8155a29600778bb239f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 1.0E-69 T 11-11-2016 RB316 3ae45989e375d8155a29600778bb239f 252 Gene3D G3DSA:3.40.50.720 7 251 5.3E-96 T 11-11-2016 IPR016040 NAD(P)-binding domain RB316 3ae45989e375d8155a29600778bb239f 252 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 14 251 4.3E-94 T 11-11-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RB316 3ae45989e375d8155a29600778bb239f 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 191 7.1E-7 T 11-11-2016 RB10140 66107bc00a7d526a707596df17e80530 606 Pfam PF00916 Sulfate permease family 312 461 5.8E-26 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RB10140 66107bc00a7d526a707596df17e80530 606 Pfam PF00916 Sulfate permease family 12 197 2.2E-27 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RB10140 66107bc00a7d526a707596df17e80530 606 Gene3D G3DSA:3.30.750.24 505 592 6.1E-10 T 11-11-2016 IPR002645 STAS domain RB10140 66107bc00a7d526a707596df17e80530 606 SUPERFAMILY SSF52091 506 585 1.41E-10 T 11-11-2016 IPR002645 STAS domain RB10140 66107bc00a7d526a707596df17e80530 606 Pfam PF01740 STAS domain 506 590 3.0E-8 T 11-11-2016 IPR002645 STAS domain RB12897 0ff79ff52bca06817184aa6698b8ee3d 303 Gene3D G3DSA:3.20.20.150 36 297 7.3E-33 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12897 0ff79ff52bca06817184aa6698b8ee3d 303 SUPERFAMILY SSF51658 37 294 3.4E-30 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12897 0ff79ff52bca06817184aa6698b8ee3d 303 Pfam PF01261 Xylose isomerase-like TIM barrel 55 247 1.5E-25 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8208 7459be426e38da3674e481c1143fee66 412 SUPERFAMILY SSF51556 59 361 8.08E-58 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB8208 7459be426e38da3674e481c1143fee66 412 Gene3D G3DSA:3.20.20.140 71 380 5.1E-49 T 11-11-2016 RB8208 7459be426e38da3674e481c1143fee66 412 SUPERFAMILY SSF51338 9 71 2.99E-8 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB8208 7459be426e38da3674e481c1143fee66 412 Pfam PF01979 Amidohydrolase family 57 380 1.4E-38 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB8208 7459be426e38da3674e481c1143fee66 412 Gene3D G3DSA:2.30.40.10 15 70 2.3E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB8271 a0b02c877fc0bc4c3b1b8ed25c91bf21 373 Gene3D G3DSA:1.25.40.10 270 330 8.2E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8271 a0b02c877fc0bc4c3b1b8ed25c91bf21 373 SUPERFAMILY SSF48452 272 329 2.95E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9884 60fdb8f34c5db07a3ffef2363bec0d9a 1074 Pfam PF07587 Protein of unknown function (DUF1553) 764 1019 1.8E-95 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB9884 60fdb8f34c5db07a3ffef2363bec0d9a 1074 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 518 666 3.4E-17 T 11-11-2016 RB9884 60fdb8f34c5db07a3ffef2363bec0d9a 1074 Pfam PF07635 Planctomycete cytochrome C 43 91 5.8E-11 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB9884 60fdb8f34c5db07a3ffef2363bec0d9a 1074 Gene3D G3DSA:2.60.120.200 491 669 2.0E-16 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB9884 60fdb8f34c5db07a3ffef2363bec0d9a 1074 SUPERFAMILY SSF46626 14 114 5.65E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9884 60fdb8f34c5db07a3ffef2363bec0d9a 1074 SUPERFAMILY SSF49899 496 671 3.59E-22 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB9884 60fdb8f34c5db07a3ffef2363bec0d9a 1074 Pfam PF07583 Protein of unknown function (DUF1549) 143 351 2.3E-79 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB188 425fa69c678da7d9defecb1af00b54df 484 SUPERFAMILY SSF111369 97 186 3.27E-7 T 11-11-2016 RB188 425fa69c678da7d9defecb1af00b54df 484 Gene3D G3DSA:2.40.50.100 284 313 9.6E-13 T 11-11-2016 RB188 425fa69c678da7d9defecb1af00b54df 484 Gene3D G3DSA:2.40.50.100 107 139 9.6E-13 T 11-11-2016 RB188 425fa69c678da7d9defecb1af00b54df 484 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 108 396 1.1E-23 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB188 425fa69c678da7d9defecb1af00b54df 484 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 249 479 4.7E-45 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB188 425fa69c678da7d9defecb1af00b54df 484 SUPERFAMILY SSF111369 236 402 1.44E-18 T 11-11-2016 RB2701 ae8a13e2d71a288c85f42aed7e93cb07 564 Gene3D G3DSA:3.30.1120.10 498 559 4.8E-12 T 11-11-2016 RB2701 ae8a13e2d71a288c85f42aed7e93cb07 564 Pfam PF16347 Domain of unknown function (DUF4976) 464 560 1.4E-14 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB2701 ae8a13e2d71a288c85f42aed7e93cb07 564 Gene3D G3DSA:3.40.720.10 100 478 7.3E-101 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2701 ae8a13e2d71a288c85f42aed7e93cb07 564 SUPERFAMILY SSF53649 101 558 7.72E-114 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2701 ae8a13e2d71a288c85f42aed7e93cb07 564 ProSitePatterns PS00523 Sulfatases signature 1. 155 167 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB2701 ae8a13e2d71a288c85f42aed7e93cb07 564 ProSitePatterns PS00149 Sulfatases signature 2. 211 221 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB2701 ae8a13e2d71a288c85f42aed7e93cb07 564 Pfam PF00884 Sulfatase 102 458 1.7E-67 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2500 4b9e2a6cb4a1fa7d4b074bd70a2882c3 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 232 5.4E-44 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB2500 4b9e2a6cb4a1fa7d4b074bd70a2882c3 306 Gene3D G3DSA:3.90.25.10 186 304 7.4E-20 T 11-11-2016 RB2500 4b9e2a6cb4a1fa7d4b074bd70a2882c3 306 SUPERFAMILY SSF51735 3 303 2.65E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2500 4b9e2a6cb4a1fa7d4b074bd70a2882c3 306 Gene3D G3DSA:3.40.50.720 3 185 1.3E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12035 206162fad8673badbc21971c4e483480 351 Gene3D G3DSA:3.20.20.150 35 293 2.0E-14 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12035 206162fad8673badbc21971c4e483480 351 SUPERFAMILY SSF51658 14 345 6.08E-24 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12035 206162fad8673badbc21971c4e483480 351 Pfam PF01261 Xylose isomerase-like TIM barrel 50 281 3.8E-8 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB10287 df81e001acf752e04a0ac4132280edd5 303 Gene3D G3DSA:3.20.20.70 13 302 6.3E-31 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB10287 df81e001acf752e04a0ac4132280edd5 303 SUPERFAMILY SSF51569 15 301 9.0E-26 T 11-11-2016 RB10287 df81e001acf752e04a0ac4132280edd5 303 SMART SM01130 11 300 5.2E-6 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB5738 4016bdd5f0198687f3eb0fb5518078be 257 SUPERFAMILY SSF56752 5 247 6.8E-35 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RB5738 4016bdd5f0198687f3eb0fb5518078be 257 Gene3D G3DSA:3.20.10.10 97 247 6.9E-23 T 11-11-2016 RB5738 4016bdd5f0198687f3eb0fb5518078be 257 Pfam PF01063 Amino-transferase class IV 4 222 5.5E-42 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RB5738 4016bdd5f0198687f3eb0fb5518078be 257 Gene3D G3DSA:3.30.470.10 5 76 4.8E-8 T 11-11-2016 RB3591 3a29d015939a2ac3a08ea1867d664b35 439 Pfam PF13439 Glycosyltransferase Family 4 6 178 5.8E-7 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB3591 3a29d015939a2ac3a08ea1867d664b35 439 SUPERFAMILY SSF53756 2 356 2.3E-58 T 11-11-2016 RB3591 3a29d015939a2ac3a08ea1867d664b35 439 Pfam PF00534 Glycosyl transferases group 1 189 332 1.4E-27 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB3591 3a29d015939a2ac3a08ea1867d664b35 439 Gene3D G3DSA:3.40.50.2000 184 333 1.4E-23 T 11-11-2016 RB10967 8d4a075945bfbd7c97e3ddce20b44135 341 Pfam PF16884 N-terminal domain of oxidoreductase 12 119 7.2E-44 T 11-11-2016 RB10967 8d4a075945bfbd7c97e3ddce20b44135 341 Gene3D G3DSA:3.90.180.10 7 146 2.5E-55 T 11-11-2016 IPR011032 GroES-like RB10967 8d4a075945bfbd7c97e3ddce20b44135 341 Pfam PF00107 Zinc-binding dehydrogenase 164 295 1.0E-25 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB10967 8d4a075945bfbd7c97e3ddce20b44135 341 Gene3D G3DSA:3.40.50.720 147 307 1.1E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10967 8d4a075945bfbd7c97e3ddce20b44135 341 SUPERFAMILY SSF50129 9 148 5.19E-40 T 11-11-2016 IPR011032 GroES-like RB10967 8d4a075945bfbd7c97e3ddce20b44135 341 SUPERFAMILY SSF51735 130 303 1.16E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10967 8d4a075945bfbd7c97e3ddce20b44135 341 SUPERFAMILY SSF50129 288 339 2.5E-5 T 11-11-2016 IPR011032 GroES-like RB10967 8d4a075945bfbd7c97e3ddce20b44135 341 SMART SM00829 24 338 4.2E-8 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB7110 a8ca74f5c0c38ef8f498d4e8fca7d4f1 105 Pfam PF07628 Protein of unknown function (DUF1589) 1 80 9.3E-6 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB10999 9f5ae2425aae4d92c4e8341c05e7c146 592 Gene3D G3DSA:2.60.120.200 49 213 6.8E-25 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB10999 9f5ae2425aae4d92c4e8341c05e7c146 592 SUPERFAMILY SSF49899 4 213 2.42E-29 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB10999 9f5ae2425aae4d92c4e8341c05e7c146 592 Gene3D G3DSA:2.120.10.10 248 582 1.6E-23 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB10999 9f5ae2425aae4d92c4e8341c05e7c146 592 Pfam PF13088 BNR repeat-like domain 301 557 6.8E-20 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB10999 9f5ae2425aae4d92c4e8341c05e7c146 592 SUPERFAMILY SSF50939 260 588 8.24E-43 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB10999 9f5ae2425aae4d92c4e8341c05e7c146 592 SMART SM00560 72 206 9.2E-4 T 11-11-2016 IPR006558 LamG-like jellyroll fold RB10999 9f5ae2425aae4d92c4e8341c05e7c146 592 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 67 209 2.8E-24 T 11-11-2016 RB11631 337c280bd6581b78a18e1ba74290e87b 104 SUPERFAMILY SSF46689 43 70 9.68E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11631 337c280bd6581b78a18e1ba74290e87b 104 Pfam PF12728 Helix-turn-helix domain 44 94 5.2E-7 T 11-11-2016 RB11631 337c280bd6581b78a18e1ba74290e87b 104 Gene3D G3DSA:1.10.10.10 44 98 4.0E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1467 c60d509e4c8ddf92d560511fe5d2496f 1185 Pfam PF01738 Dienelactone hydrolase family 222 333 1.1E-6 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 RB1467 c60d509e4c8ddf92d560511fe5d2496f 1185 Gene3D G3DSA:3.40.50.1820 180 354 8.9E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1467 c60d509e4c8ddf92d560511fe5d2496f 1185 Gene3D G3DSA:3.40.50.1820 32 139 8.9E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1467 c60d509e4c8ddf92d560511fe5d2496f 1185 SUPERFAMILY SSF53474 218 359 1.43E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1467 c60d509e4c8ddf92d560511fe5d2496f 1185 SUPERFAMILY SSF53474 45 153 1.43E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB93 b7fb6e056c4e5b4a2a00ce1e202c76bf 323 SUPERFAMILY SSF51658 93 277 1.27E-5 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 Pfam PF11870 Domain of unknown function (DUF3390) 405 468 5.5E-7 T 11-11-2016 IPR024569 4Fe-4S binding protein, C-terminal RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 319 330 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 Gene3D G3DSA:3.40.50.10420 200 291 1.2E-38 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 Gene3D G3DSA:3.40.50.10420 75 138 1.2E-38 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 SUPERFAMILY SSF54862 296 398 8.79E-17 T 11-11-2016 RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 80 291 6.0E-46 T 11-11-2016 IPR003741 LUD domain RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 Pfam PF13183 4Fe-4S dicluster domain 317 382 9.9E-13 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 Gene3D G3DSA:1.10.1060.10 312 401 8.8E-14 T 11-11-2016 RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 368 379 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 SUPERFAMILY SSF100950 75 99 7.95E-33 T 11-11-2016 RB7618 5536cf3eb057b709fa4f9c6d80c04fc0 483 SUPERFAMILY SSF100950 145 301 7.95E-33 T 11-11-2016 RB6755 1818bc35df17f5168103062cae9ff0fe 583 Gene3D G3DSA:2.30.38.10 376 465 2.1E-14 T 11-11-2016 RB6755 1818bc35df17f5168103062cae9ff0fe 583 Gene3D G3DSA:3.40.50.980 210 358 7.3E-21 T 11-11-2016 RB6755 1818bc35df17f5168103062cae9ff0fe 583 Gene3D G3DSA:3.40.50.980 62 151 7.5E-22 T 11-11-2016 RB6755 1818bc35df17f5168103062cae9ff0fe 583 Gene3D G3DSA:3.40.50.980 185 209 7.5E-22 T 11-11-2016 RB6755 1818bc35df17f5168103062cae9ff0fe 583 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 11-11-2016 IPR020845 AMP-binding, conserved site RB6755 1818bc35df17f5168103062cae9ff0fe 583 Pfam PF00501 AMP-binding enzyme 58 474 4.9E-48 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RB6755 1818bc35df17f5168103062cae9ff0fe 583 SUPERFAMILY SSF56801 26 577 3.01E-72 T 11-11-2016 RB9937 27b2aeee006d4b8798c28c64bc1551cd 503 Gene3D G3DSA:1.20.1250.20 297 484 2.0E-11 T 11-11-2016 RB9937 27b2aeee006d4b8798c28c64bc1551cd 503 Gene3D G3DSA:1.20.1250.20 112 272 1.2E-6 T 11-11-2016 RB9937 27b2aeee006d4b8798c28c64bc1551cd 503 Pfam PF07690 Major Facilitator Superfamily 109 446 3.1E-20 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB9937 27b2aeee006d4b8798c28c64bc1551cd 503 SUPERFAMILY SSF103473 111 489 1.2E-27 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB3281 8387a1174a46c3323d0a1caa0d57449a 139 Gene3D G3DSA:4.10.520.10 1 93 2.7E-30 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RB3281 8387a1174a46c3323d0a1caa0d57449a 139 SUPERFAMILY SSF47729 1 92 1.46E-28 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RB3281 8387a1174a46c3323d0a1caa0d57449a 139 SMART SM00411 1 90 2.0E-29 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RB3281 8387a1174a46c3323d0a1caa0d57449a 139 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.3E-12 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RB3281 8387a1174a46c3323d0a1caa0d57449a 139 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.3E-12 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RB3281 8387a1174a46c3323d0a1caa0d57449a 139 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.3E-12 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RB3281 8387a1174a46c3323d0a1caa0d57449a 139 Pfam PF00216 Bacterial DNA-binding protein 1 89 2.2E-29 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RB1789 50c940a92f155dc17b0ff1261ba55dde 243 SUPERFAMILY SSF49879 3 109 1.91E-27 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB1789 50c940a92f155dc17b0ff1261ba55dde 243 Gene3D G3DSA:2.60.200.20 2 100 3.0E-29 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB1789 50c940a92f155dc17b0ff1261ba55dde 243 Pfam PF00498 FHA domain 25 90 1.1E-18 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB1789 50c940a92f155dc17b0ff1261ba55dde 243 SMART SM00240 23 73 1.1E-12 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB9670 2b75f0012a82190af599db72da8bf17a 238 Pfam PF01797 Transposase IS200 like 142 212 7.9E-7 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB9670 2b75f0012a82190af599db72da8bf17a 238 Gene3D G3DSA:3.30.70.1290 142 215 8.3E-13 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB9670 2b75f0012a82190af599db72da8bf17a 238 SMART SM01321 37 212 2.4E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB9670 2b75f0012a82190af599db72da8bf17a 238 SUPERFAMILY SSF143422 140 217 5.76E-19 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB11258 f5acb84cafea54aa5cfcf984eb4a173f 237 Pfam PF09335 SNARE associated Golgi protein 70 180 2.1E-16 T 11-11-2016 IPR032816 SNARE associated Golgi protein RB4271 d7e871d868197bdbdba83d09baef7ecb 968 SUPERFAMILY SSF52151 610 719 1.07E-10 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB4271 d7e871d868197bdbdba83d09baef7ecb 968 SUPERFAMILY SSF52151 406 472 1.07E-10 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB4271 d7e871d868197bdbdba83d09baef7ecb 968 SUPERFAMILY SSF52151 520 579 1.07E-10 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RB5278 486475b307f272d4ad43895541f04c26 456 SUPERFAMILY SSF51905 150 311 1.68E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5278 486475b307f272d4ad43895541f04c26 456 SUPERFAMILY SSF51905 399 456 1.68E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5278 486475b307f272d4ad43895541f04c26 456 SUPERFAMILY SSF51905 48 97 1.68E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5278 486475b307f272d4ad43895541f04c26 456 SUPERFAMILY SSF54373 311 398 9.42E-11 T 11-11-2016 RB5278 486475b307f272d4ad43895541f04c26 456 Pfam PF01266 FAD dependent oxidoreductase 48 437 2.3E-56 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RB5278 486475b307f272d4ad43895541f04c26 456 Gene3D G3DSA:3.50.50.60 151 173 1.0E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5278 486475b307f272d4ad43895541f04c26 456 Gene3D G3DSA:3.50.50.60 229 310 1.0E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5278 486475b307f272d4ad43895541f04c26 456 Gene3D G3DSA:3.50.50.60 399 456 1.0E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5278 486475b307f272d4ad43895541f04c26 456 Gene3D G3DSA:3.50.50.60 47 101 1.0E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 PIRSF PIRSF500133 9 477 5.5E-259 T 11-11-2016 IPR028356 UDP-glucose 6-dehydrogenase, eukaryotic type GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|Reactome: R-HSA-173599 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 SUPERFAMILY SSF48179 219 318 3.06E-26 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 SUPERFAMILY SSF51735 15 210 3.19E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1784 8bbffedde8b430f9b4f9e4974562d449 477 PIRSF PIRSF000124 15 475 4.2E-128 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 SMART SM00984 337 460 2.1E-38 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 219 313 3.2E-29 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 Gene3D G3DSA:3.40.50.720 15 221 1.3E-78 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1784 8bbffedde8b430f9b4f9e4974562d449 477 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 15 456 8.0E-102 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 16 200 2.1E-61 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 337 459 5.0E-35 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 SUPERFAMILY SSF52413 324 470 4.05E-30 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 Gene3D G3DSA:1.20.5.100 222 248 1.0E-13 T 11-11-2016 RB1784 8bbffedde8b430f9b4f9e4974562d449 477 Gene3D G3DSA:3.40.50.720 251 474 5.5E-85 T 11-11-2016 IPR016040 NAD(P)-binding domain RB13150 4005e243f75cb665b718f9fc98c8358f 527 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 128 417 3.8E-71 T 11-11-2016 IPR005181 Sialate O-acetylesterase domain RB13150 4005e243f75cb665b718f9fc98c8358f 527 SUPERFAMILY SSF52266 127 222 1.92E-55 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB13150 4005e243f75cb665b718f9fc98c8358f 527 SUPERFAMILY SSF52266 271 477 1.92E-55 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB5934 bcd564439b0e56a8b7fd917c49f38c0d 661 SUPERFAMILY SSF81853 226 374 2.07E-37 T 11-11-2016 RB5934 bcd564439b0e56a8b7fd917c49f38c0d 661 SUPERFAMILY SSF81853 404 571 2.07E-37 T 11-11-2016 RB5934 bcd564439b0e56a8b7fd917c49f38c0d 661 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 300 569 3.0E-19 T 11-11-2016 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 RB5934 bcd564439b0e56a8b7fd917c49f38c0d 661 SUPERFAMILY SSF48239 76 292 2.62E-27 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB5934 bcd564439b0e56a8b7fd917c49f38c0d 661 Gene3D G3DSA:1.50.10.20 27 283 1.7E-28 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB5934 bcd564439b0e56a8b7fd917c49f38c0d 661 Gene3D G3DSA:1.50.10.20 284 655 3.2E-50 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB5934 bcd564439b0e56a8b7fd917c49f38c0d 661 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 27 191 7.7E-11 T 11-11-2016 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 RB6964 222474746192ffed7ea3c3998c640b72 1189 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 52 245 1.1E-47 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB6964 222474746192ffed7ea3c3998c640b72 1189 Gene3D G3DSA:1.10.760.10 880 960 8.8E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6964 222474746192ffed7ea3c3998c640b72 1189 Gene3D G3DSA:1.10.760.10 995 1021 8.8E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6964 222474746192ffed7ea3c3998c640b72 1189 Gene3D G3DSA:2.120.10.30 19 389 1.1E-27 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB6964 222474746192ffed7ea3c3998c640b72 1189 SUPERFAMILY SSF46626 882 947 5.93E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6964 222474746192ffed7ea3c3998c640b72 1189 SUPERFAMILY SSF46626 995 1021 5.93E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6964 222474746192ffed7ea3c3998c640b72 1189 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 885 1018 8.9E-27 T 11-11-2016 IPR013427 Haem-binding domain, putative RB6964 222474746192ffed7ea3c3998c640b72 1189 SUPERFAMILY SSF50952 43 366 3.79E-13 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 Pfam PF13180 PDZ domain 287 354 2.0E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 SUPERFAMILY SSF50156 380 473 1.71E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 SUPERFAMILY SSF52833 75 134 8.39E-5 T 11-11-2016 IPR012336 Thioredoxin-like fold RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 Gene3D G3DSA:3.40.30.10 78 141 2.7E-6 T 11-11-2016 IPR012336 Thioredoxin-like fold RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 Gene3D G3DSA:2.30.42.10 280 354 1.3E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 SMART SM00228 275 345 1.0E-4 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 SMART SM00228 377 464 0.86 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 Gene3D G3DSA:2.30.42.10 380 472 1.0E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 Pfam PF13899 Thioredoxin-like 76 159 3.0E-17 T 11-11-2016 RB9222 bb69ecb948070dbfe4bb736c9af90b0e 475 SUPERFAMILY SSF50156 281 354 3.81E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB5029 74511df74a44bf55ce26310cac7144e8 236 SUPERFAMILY SSF53335 62 234 8.68E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB5029 74511df74a44bf55ce26310cac7144e8 236 Pfam PF08241 Methyltransferase domain 82 180 5.2E-10 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RB5029 74511df74a44bf55ce26310cac7144e8 236 Gene3D G3DSA:3.40.50.150 65 219 6.3E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10283 e38826c9b6dfe8cbfc9ff1d3649db14e 107 SUPERFAMILY SSF49764 2 106 4.6E-31 T 11-11-2016 IPR008978 HSP20-like chaperone RB10283 e38826c9b6dfe8cbfc9ff1d3649db14e 107 Gene3D G3DSA:2.60.40.790 1 106 5.2E-31 T 11-11-2016 IPR008978 HSP20-like chaperone RB10283 e38826c9b6dfe8cbfc9ff1d3649db14e 107 Pfam PF00011 Hsp20/alpha crystallin family 7 105 3.9E-21 T 11-11-2016 IPR002068 Alpha crystallin/Hsp20 domain RB9966 1c6614d8e8f436f17037a59d64e2394c 461 Pfam PF04055 Radical SAM superfamily 86 223 8.2E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB9966 1c6614d8e8f436f17037a59d64e2394c 461 SUPERFAMILY SSF102114 77 348 1.02E-40 T 11-11-2016 RB9966 1c6614d8e8f436f17037a59d64e2394c 461 Pfam PF13353 4Fe-4S single cluster domain 88 153 1.0E-4 T 11-11-2016 RB9966 1c6614d8e8f436f17037a59d64e2394c 461 Gene3D G3DSA:3.20.20.70 79 361 1.9E-35 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB5378 bcde079196089a38e573f1f038445754 490 Gene3D G3DSA:3.40.720.10 32 368 6.0E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5378 bcde079196089a38e573f1f038445754 490 SUPERFAMILY SSF53649 32 460 4.22E-120 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5378 bcde079196089a38e573f1f038445754 490 ProSitePatterns PS00149 Sulfatases signature 2. 140 150 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB5378 bcde079196089a38e573f1f038445754 490 Pfam PF00884 Sulfatase 34 348 1.7E-64 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB5378 bcde079196089a38e573f1f038445754 490 Gene3D G3DSA:3.30.1120.10 373 468 3.2E-19 T 11-11-2016 RB5378 bcde079196089a38e573f1f038445754 490 Pfam PF16347 Domain of unknown function (DUF4976) 354 456 2.3E-7 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB249 8d7c3be548eb73426b351679848c01b9 509 SUPERFAMILY SSF53098 112 411 2.73E-35 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB249 8d7c3be548eb73426b351679848c01b9 509 Pfam PF01609 Transposase DDE domain 233 399 6.6E-18 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB4908 18df0a9dc1ec76f015533de27f377220 131 SUPERFAMILY SSF51344 1 81 9.42E-17 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB4908 18df0a9dc1ec76f015533de27f377220 131 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 80 1.4E-18 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB4908 18df0a9dc1ec76f015533de27f377220 131 TIGRFAM TIGR03166 alt_F1F0_F1_eps: alternate F1F0 ATPase, F1 subunit epsilon 2 122 9.1E-50 T 11-11-2016 IPR024037 Alternate F1F0 ATPase, F1 subunit epsilon RB4908 18df0a9dc1ec76f015533de27f377220 131 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 7 80 2.0E-6 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB4908 18df0a9dc1ec76f015533de27f377220 131 Gene3D G3DSA:2.60.15.10 1 85 4.2E-16 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB3500 0656100e95bfea9d36e505acce280d9f 480 SUPERFAMILY SSF53590 29 165 4.97E-8 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB3500 0656100e95bfea9d36e505acce280d9f 480 Pfam PF07632 Protein of unknown function (DUF1593) 29 287 5.7E-96 T 11-11-2016 IPR011483 Protein of unknown function DUF1593 RB12856 8cb45ba016a3533b2a76287253c82554 201 Gene3D G3DSA:3.90.45.10 4 172 3.6E-57 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 SUPERFAMILY SSF56420 2 153 3.93E-52 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 PIRSF PIRSF004749 1 181 5.5E-61 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 PRINTS PR01576 Peptide deformylase signature 90 101 1.3E-33 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 PRINTS PR01576 Peptide deformylase signature 102 120 1.3E-33 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 PRINTS PR01576 Peptide deformylase signature 32 61 1.3E-33 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 PRINTS PR01576 Peptide deformylase signature 121 150 1.3E-33 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 150 9.3E-45 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 Hamap MF_00163 Peptide deformylase [def]. 1 156 27.555 T 11-11-2016 IPR023635 Peptide deformylase RB12856 8cb45ba016a3533b2a76287253c82554 201 Pfam PF01327 Polypeptide deformylase 4 150 1.4E-45 T 11-11-2016 IPR023635 Peptide deformylase RB8909 ad97fa7528add441e0215386e6abbb17 560 Gene3D G3DSA:1.20.58.220 356 449 2.1E-5 T 11-11-2016 RB8909 ad97fa7528add441e0215386e6abbb17 560 SUPERFAMILY SSF109755 353 556 1.15E-23 T 11-11-2016 RB8909 ad97fa7528add441e0215386e6abbb17 560 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 10 332 1.3E-69 T 11-11-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 RB8909 ad97fa7528add441e0215386e6abbb17 560 Gene3D G3DSA:1.20.58.220 466 556 4.6E-4 T 11-11-2016 RB8909 ad97fa7528add441e0215386e6abbb17 560 Pfam PF02690 Na+/Pi-cotransporter 19 154 2.1E-46 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RB8909 ad97fa7528add441e0215386e6abbb17 560 Pfam PF02690 Na+/Pi-cotransporter 182 265 3.5E-16 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RB8909 ad97fa7528add441e0215386e6abbb17 560 Pfam PF01895 PhoU domain 364 449 2.4E-5 T 11-11-2016 IPR026022 PhoU domain RB1414 dc239de83bc3d1fb39ddd5b8e2047029 420 Pfam PF13633 Prokaryotic N-terminal methylation site 7 33 3.0E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1414 dc239de83bc3d1fb39ddd5b8e2047029 420 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 5.7E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1414 dc239de83bc3d1fb39ddd5b8e2047029 420 Pfam PF07596 Protein of unknown function (DUF1559) 34 377 1.8E-63 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB1414 dc239de83bc3d1fb39ddd5b8e2047029 420 Gene3D G3DSA:3.30.700.10 10 78 2.3E-7 T 11-11-2016 RB1414 dc239de83bc3d1fb39ddd5b8e2047029 420 SUPERFAMILY SSF54523 10 172 1.65E-27 T 11-11-2016 RB1414 dc239de83bc3d1fb39ddd5b8e2047029 420 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1325 aeb971e104530ca8db13d7eb0088ca2a 283 SMART SM00382 26 206 8.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB1325 aeb971e104530ca8db13d7eb0088ca2a 283 Pfam PF00005 ABC transporter 17 158 4.8E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB1325 aeb971e104530ca8db13d7eb0088ca2a 283 Gene3D G3DSA:3.40.50.300 1 221 4.3E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1325 aeb971e104530ca8db13d7eb0088ca2a 283 SUPERFAMILY SSF52540 1 221 1.23E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10478 8b2221b3095cbd1764e6e193a772455d 321 Gene3D G3DSA:2.40.50.100 66 99 2.0E-11 T 11-11-2016 RB10478 8b2221b3095cbd1764e6e193a772455d 321 Gene3D G3DSA:2.40.50.100 201 234 2.0E-11 T 11-11-2016 RB10478 8b2221b3095cbd1764e6e193a772455d 321 Pfam PF13533 Biotin-lipoyl like 67 108 2.6E-5 T 11-11-2016 RB10478 8b2221b3095cbd1764e6e193a772455d 321 SUPERFAMILY SSF111369 61 295 2.62E-13 T 11-11-2016 RB10478 8b2221b3095cbd1764e6e193a772455d 321 Pfam PF13437 HlyD family secretion protein 204 302 5.9E-7 T 11-11-2016 RB4108 640bb4ad16ebfb248453b52d5b14567f 232 Gene3D G3DSA:1.10.3680.10 119 228 1.3E-24 T 11-11-2016 IPR029024 TerB-like RB4108 640bb4ad16ebfb248453b52d5b14567f 232 SUPERFAMILY SSF158682 126 229 6.28E-18 T 11-11-2016 IPR029024 TerB-like RB4108 640bb4ad16ebfb248453b52d5b14567f 232 Pfam PF05099 Tellurite resistance protein TerB 127 228 4.9E-15 T 11-11-2016 IPR007791 Co-chaperone DjlA, N-terminal RB8423 e12ab007c884ddd1c71b331e395a3553 651 Pfam PF00884 Sulfatase 158 315 3.6E-21 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB8423 e12ab007c884ddd1c71b331e395a3553 651 Pfam PF00884 Sulfatase 37 127 3.5E-16 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB8423 e12ab007c884ddd1c71b331e395a3553 651 Gene3D G3DSA:3.30.1120.10 415 462 1.9E-19 T 11-11-2016 RB8423 e12ab007c884ddd1c71b331e395a3553 651 Gene3D G3DSA:3.30.1120.10 361 376 1.9E-19 T 11-11-2016 RB8423 e12ab007c884ddd1c71b331e395a3553 651 Gene3D G3DSA:3.40.720.10 154 360 3.7E-35 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8423 e12ab007c884ddd1c71b331e395a3553 651 Gene3D G3DSA:3.40.720.10 34 130 9.0E-26 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8423 e12ab007c884ddd1c71b331e395a3553 651 SUPERFAMILY SSF48371 485 620 3.3E-13 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB8423 e12ab007c884ddd1c71b331e395a3553 651 SUPERFAMILY SSF53649 35 176 3.78E-86 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8423 e12ab007c884ddd1c71b331e395a3553 651 SUPERFAMILY SSF53649 207 466 3.78E-86 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8423 e12ab007c884ddd1c71b331e395a3553 651 Gene3D G3DSA:1.25.10.10 485 624 2.3E-11 T 11-11-2016 IPR011989 Armadillo-like helical RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 281 356 7.0E-38 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 Gene3D G3DSA:3.40.50.300 51 206 6.1E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 366 118.188 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 SUPERFAMILY SSF46785 287 361 6.44E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 Gene3D G3DSA:1.10.10.10 288 358 5.2E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 Gene3D G3DSA:1.10.8.60 214 286 2.7E-22 T 11-11-2016 RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 47 265 5.3E-85 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 284 357 1.3E-26 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 SMART SM00382 82 209 3.8E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 SUPERFAMILY SSF52540 51 282 5.53E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6959 7d5e3770ebe5ba1f8b7be7604bb75bed 366 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 55 357 1.3E-115 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RB5346 4f0df26f2bdfaf44f903bbbfa06d6c57 148 Gene3D G3DSA:3.30.70.1290 3 121 4.1E-28 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB5346 4f0df26f2bdfaf44f903bbbfa06d6c57 148 SMART SM01321 3 117 7.9E-25 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB5346 4f0df26f2bdfaf44f903bbbfa06d6c57 148 SUPERFAMILY SSF143422 3 119 9.03E-33 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB5346 4f0df26f2bdfaf44f903bbbfa06d6c57 148 Pfam PF01797 Transposase IS200 like 4 117 3.9E-31 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB10004 ee63e7c4cfd004823d3043dd254b8d02 359 SUPERFAMILY SSF51735 126 308 6.19E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10004 ee63e7c4cfd004823d3043dd254b8d02 359 Gene3D G3DSA:3.40.50.720 141 308 4.5E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10004 ee63e7c4cfd004823d3043dd254b8d02 359 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 134 307 1.7E-52 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RB10004 ee63e7c4cfd004823d3043dd254b8d02 359 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 246 262 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RB10004 ee63e7c4cfd004823d3043dd254b8d02 359 Gene3D G3DSA:3.40.50.720 48 140 2.2E-11 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10004 ee63e7c4cfd004823d3043dd254b8d02 359 SUPERFAMILY SSF52283 51 149 1.96E-7 T 11-11-2016 RB1858 19ee60c94d26684d73630452bd213546 264 Gene3D G3DSA:3.40.50.150 96 252 6.3E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB1858 19ee60c94d26684d73630452bd213546 264 SUPERFAMILY SSF53335 103 242 7.3E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB1858 19ee60c94d26684d73630452bd213546 264 Pfam PF10294 Lysine methyltransferase 116 221 4.7E-9 T 11-11-2016 IPR019410 Lysine methyltransferase RB13319 574555cb5a2e8c30d1bf5293f528aae2 421 SUPERFAMILY SSF54523 19 169 4.32E-28 T 11-11-2016 RB13319 574555cb5a2e8c30d1bf5293f528aae2 421 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13319 574555cb5a2e8c30d1bf5293f528aae2 421 Pfam PF07596 Protein of unknown function (DUF1559) 43 379 2.9E-63 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB13319 574555cb5a2e8c30d1bf5293f528aae2 421 Pfam PF13633 Prokaryotic N-terminal methylation site 17 42 2.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13319 574555cb5a2e8c30d1bf5293f528aae2 421 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 6.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13319 574555cb5a2e8c30d1bf5293f528aae2 421 Gene3D G3DSA:3.30.700.10 19 92 6.9E-8 T 11-11-2016 RB5471 db758907a2e290ec856a9bb12d742b7f 124 SUPERFAMILY SSF52172 3 115 6.55E-19 T 11-11-2016 IPR011006 CheY-like superfamily RB5471 db758907a2e290ec856a9bb12d742b7f 124 Pfam PF00072 Response regulator receiver domain 6 103 7.0E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5471 db758907a2e290ec856a9bb12d742b7f 124 Gene3D G3DSA:3.40.50.2300 2 108 7.4E-19 T 11-11-2016 RB5471 db758907a2e290ec856a9bb12d742b7f 124 SMART SM00448 4 117 8.7E-5 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB10215 70f29ac1e31add009f49e8b20248a715 507 Gene3D G3DSA:3.40.50.300 95 371 1.1E-105 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10215 70f29ac1e31add009f49e8b20248a715 507 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 1.2E-15 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10215 70f29ac1e31add009f49e8b20248a715 507 SUPERFAMILY SSF47917 372 500 1.65E-43 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10215 70f29ac1e31add009f49e8b20248a715 507 Gene3D G3DSA:1.20.150.20 372 499 8.8E-49 T 11-11-2016 RB10215 70f29ac1e31add009f49e8b20248a715 507 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.3E-64 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10215 70f29ac1e31add009f49e8b20248a715 507 PIRSF PIRSF039088 1 502 1.1E-232 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB10215 70f29ac1e31add009f49e8b20248a715 507 SUPERFAMILY SSF50615 10 92 2.01E-27 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10215 70f29ac1e31add009f49e8b20248a715 507 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 500 7.9E-237 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB10215 70f29ac1e31add009f49e8b20248a715 507 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 48.529 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB10215 70f29ac1e31add009f49e8b20248a715 507 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 1.8E-47 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10215 70f29ac1e31add009f49e8b20248a715 507 SUPERFAMILY SSF52540 96 370 2.43E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10215 70f29ac1e31add009f49e8b20248a715 507 Gene3D G3DSA:2.40.30.20 2 92 1.4E-33 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB1214 765f6a1fa542b956e2052c2fdf94e2b6 381 Pfam PF13394 4Fe-4S single cluster domain 161 230 8.5E-6 T 11-11-2016 RB1214 765f6a1fa542b956e2052c2fdf94e2b6 381 SUPERFAMILY SSF102114 149 368 2.62E-24 T 11-11-2016 RB1214 765f6a1fa542b956e2052c2fdf94e2b6 381 Gene3D G3DSA:3.20.20.70 151 359 6.9E-13 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB1214 765f6a1fa542b956e2052c2fdf94e2b6 381 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 59 380 2.9E-122 T 11-11-2016 IPR022462 Lysine-2,3-aminomutase-like RB1214 765f6a1fa542b956e2052c2fdf94e2b6 381 PIRSF PIRSF004911 26 381 2.7E-128 T 11-11-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase RB1214 765f6a1fa542b956e2052c2fdf94e2b6 381 TIGRFAM TIGR00238 TIGR00238: KamA family protein 49 374 1.3E-94 T 11-11-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase RB1214 765f6a1fa542b956e2052c2fdf94e2b6 381 Pfam PF04055 Radical SAM superfamily 162 309 4.0E-7 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB4474 8c95a9923d3a732644b7b636dc5ddf0f 168 Pfam PF05532 CsbD-like 31 82 7.9E-17 T 11-11-2016 IPR008462 CsbD-like RB4474 8c95a9923d3a732644b7b636dc5ddf0f 168 SUPERFAMILY SSF69047 28 92 7.32E-20 T 11-11-2016 IPR008462 CsbD-like RB4474 8c95a9923d3a732644b7b636dc5ddf0f 168 Gene3D G3DSA:1.10.1470.10 28 91 3.2E-21 T 11-11-2016 IPR008462 CsbD-like RB5995 f560bf37dda80486aab8f662b327ad76 342 Pfam PF07728 AAA domain (dynein-related subfamily) 76 197 6.5E-16 T 11-11-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RB5995 f560bf37dda80486aab8f662b327ad76 342 Gene3D G3DSA:3.40.50.300 76 224 1.7E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5995 f560bf37dda80486aab8f662b327ad76 342 SUPERFAMILY SSF52540 47 272 2.67E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12786 3a3f57b71d332632b332ca3c4754435a 413 Gene3D G3DSA:3.30.700.10 15 57 5.3E-7 T 11-11-2016 RB12786 3a3f57b71d332632b332ca3c4754435a 413 Pfam PF13633 Prokaryotic N-terminal methylation site 13 37 5.5E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB12786 3a3f57b71d332632b332ca3c4754435a 413 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB12786 3a3f57b71d332632b332ca3c4754435a 413 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 9.2E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB12786 3a3f57b71d332632b332ca3c4754435a 413 SUPERFAMILY SSF54523 15 84 2.04E-11 T 11-11-2016 RB10670 faefbae21f3ca0eae2ac8dc4ffbc49ea 623 Pfam PF00884 Sulfatase 258 526 1.3E-22 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10670 faefbae21f3ca0eae2ac8dc4ffbc49ea 623 Gene3D G3DSA:3.40.720.10 258 541 4.5E-26 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB10670 faefbae21f3ca0eae2ac8dc4ffbc49ea 623 SUPERFAMILY SSF53649 254 546 3.11E-43 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10670 faefbae21f3ca0eae2ac8dc4ffbc49ea 623 PIRSF PIRSF004950 3 619 2.2E-172 T 11-11-2016 IPR012159 Inner membrane protein YejM RB12292 78b157450a3e02cf874d9ea144bb81c4 378 SUPERFAMILY SSF52283 2 171 1.02E-50 T 11-11-2016 RB12292 78b157450a3e02cf874d9ea144bb81c4 378 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 11-11-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 RB12292 78b157450a3e02cf874d9ea144bb81c4 378 SMART SM01003 5 140 2.1E-64 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RB12292 78b157450a3e02cf874d9ea144bb81c4 378 SUPERFAMILY SSF51735 140 319 3.4E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12292 78b157450a3e02cf874d9ea144bb81c4 378 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 145 370 1.7E-66 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RB12292 78b157450a3e02cf874d9ea144bb81c4 378 SMART SM01002 149 313 2.3E-69 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RB12292 78b157450a3e02cf874d9ea144bb81c4 378 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 140 8.0E-45 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RB12292 78b157450a3e02cf874d9ea144bb81c4 378 Gene3D G3DSA:3.50.50.60 170 203 4.5E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB12292 78b157450a3e02cf874d9ea144bb81c4 378 Gene3D G3DSA:3.40.50.1770 2 169 2.7E-60 T 11-11-2016 RB12292 78b157450a3e02cf874d9ea144bb81c4 378 Gene3D G3DSA:3.40.50.1770 204 368 8.8E-30 T 11-11-2016 RB12227 6c2cd20071e377058255c58ed3ecb97c 146 Pfam PF13564 DoxX-like family 20 115 1.6E-15 T 11-11-2016 IPR032808 DoxX family RB11412 816b2c1e6ad673371bc24ff49bf320e0 385 SUPERFAMILY SSF116734 55 256 8.01E-26 T 11-11-2016 RB11412 816b2c1e6ad673371bc24ff49bf320e0 385 SUPERFAMILY SSF116734 1 51 4.91E-12 T 11-11-2016 RB11412 816b2c1e6ad673371bc24ff49bf320e0 385 Pfam PF01420 Type I restriction modification DNA specificity domain 1 35 3.6E-5 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 Gene3D G3DSA:2.30.40.10 470 505 5.3E-6 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 Gene3D G3DSA:2.30.40.10 43 134 7.5E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 SUPERFAMILY SSF51338 469 543 1.21E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 SUPERFAMILY SSF51556 100 496 7.94E-23 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 TIGRFAM TIGR03121 one_C_dehyd_A: formylmethanofuran dehydrogenase subunit A 45 589 7.3E-222 T 11-11-2016 IPR012027 Formylmethanofuran dehydrogenase, subunit A RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 Pfam PF07969 Amidohydrolase family 88 517 1.5E-46 T 11-11-2016 IPR013108 Amidohydrolase 3 RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 Gene3D G3DSA:2.30.40.10 506 535 3.2E-4 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 SUPERFAMILY SSF51338 45 100 4.75E-6 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 SUPERFAMILY SSF51338 496 514 4.75E-6 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB9834 b6d1afab7f7b12a9c0fad6d8a8e823a2 606 PIRSF PIRSF006453 8 600 5.6E-234 T 11-11-2016 IPR012027 Formylmethanofuran dehydrogenase, subunit A RB7897 ac3da281071f175785a0e39a63bae688 152 Gene3D G3DSA:1.20.5.1030 93 148 4.0E-15 T 11-11-2016 RB7897 ac3da281071f175785a0e39a63bae688 152 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 96 148 1.3E-13 T 11-11-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7897 ac3da281071f175785a0e39a63bae688 152 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 96 148 1.2E-13 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RB7897 ac3da281071f175785a0e39a63bae688 152 Hamap MF_00422 Protein translocase subunit SecE [secE]. 92 147 11.453 T 11-11-2016 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RB7399 e427e6f01c6526d68b6179bd559a1873 461 SUPERFAMILY SSF56349 75 327 1.77E-54 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB7399 e427e6f01c6526d68b6179bd559a1873 461 Pfam PF00589 Phage integrase family 163 325 6.9E-48 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB7399 e427e6f01c6526d68b6179bd559a1873 461 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 73 136 1.8E-8 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB7399 e427e6f01c6526d68b6179bd559a1873 461 Gene3D G3DSA:1.10.443.10 163 328 9.5E-50 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB7399 e427e6f01c6526d68b6179bd559a1873 461 Gene3D G3DSA:1.10.150.130 80 138 4.3E-7 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal RB1909 90c22442ec78d613be4bf5357c22ee20 166 SUPERFAMILY SSF46458 22 161 1.87E-36 T 11-11-2016 IPR009050 Globin-like RB1909 90c22442ec78d613be4bf5357c22ee20 166 Gene3D G3DSA:1.10.490.10 29 162 6.1E-37 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RB1909 90c22442ec78d613be4bf5357c22ee20 166 Pfam PF00042 Globin 33 127 3.1E-12 T 11-11-2016 IPR000971 Globin GO:0019825|GO:0020037 RB3622 da320208420d8bf174413f65fb17d99c 440 Gene3D G3DSA:1.20.1530.10 21 261 1.3E-140 T 11-11-2016 IPR023171 Na/H antiporter domain RB3622 da320208420d8bf174413f65fb17d99c 440 Gene3D G3DSA:1.20.1530.10 302 434 1.3E-140 T 11-11-2016 IPR023171 Na/H antiporter domain RB3622 da320208420d8bf174413f65fb17d99c 440 Pfam PF06965 Na+/H+ antiporter 1 24 429 2.7E-142 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RB3622 da320208420d8bf174413f65fb17d99c 440 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 22 436 22.255 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RB3622 da320208420d8bf174413f65fb17d99c 440 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 25 429 3.4E-122 T 11-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RB4744 5b66f1e13fb39f9eb199394180e58174 309 SUPERFAMILY SSF52402 11 153 1.34E-29 T 11-11-2016 RB4744 5b66f1e13fb39f9eb199394180e58174 309 Gene3D G3DSA:3.40.50.620 163 290 9.9E-23 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB4744 5b66f1e13fb39f9eb199394180e58174 309 SUPERFAMILY SSF52402 163 291 2.68E-22 T 11-11-2016 RB4744 5b66f1e13fb39f9eb199394180e58174 309 PRINTS PR01438 Universal stress protein signature 111 123 9.3E-14 T 11-11-2016 IPR006015 Universal stress protein A RB4744 5b66f1e13fb39f9eb199394180e58174 309 PRINTS PR01438 Universal stress protein signature 129 151 9.3E-14 T 11-11-2016 IPR006015 Universal stress protein A RB4744 5b66f1e13fb39f9eb199394180e58174 309 PRINTS PR01438 Universal stress protein signature 11 29 9.3E-14 T 11-11-2016 IPR006015 Universal stress protein A RB4744 5b66f1e13fb39f9eb199394180e58174 309 Gene3D G3DSA:3.40.50.620 8 153 1.2E-31 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB4744 5b66f1e13fb39f9eb199394180e58174 309 Pfam PF00582 Universal stress protein family 195 290 6.6E-16 T 11-11-2016 IPR006016 UspA GO:0006950 RB4744 5b66f1e13fb39f9eb199394180e58174 309 Pfam PF00582 Universal stress protein family 11 151 2.5E-24 T 11-11-2016 IPR006016 UspA GO:0006950 RB4711 816671ff582965d20f8eb48ba30c54c4 149 Pfam PF07681 DoxX 24 106 7.8E-19 T 11-11-2016 IPR032808 DoxX family RB13048 4156bcdce387dfec9f879a37bd985aea 449 SMART SM00564 235 265 55.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB13048 4156bcdce387dfec9f879a37bd985aea 449 SMART SM00564 331 361 17.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB13048 4156bcdce387dfec9f879a37bd985aea 449 SMART SM00564 178 215 180.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB13048 4156bcdce387dfec9f879a37bd985aea 449 Gene3D G3DSA:2.140.10.10 326 444 1.6E-8 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB13048 4156bcdce387dfec9f879a37bd985aea 449 Gene3D G3DSA:2.140.10.10 124 325 1.6E-26 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB13048 4156bcdce387dfec9f879a37bd985aea 449 SUPERFAMILY SSF50998 136 445 2.88E-40 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB13048 4156bcdce387dfec9f879a37bd985aea 449 Pfam PF13360 PQQ-like domain 301 443 1.4E-7 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB13048 4156bcdce387dfec9f879a37bd985aea 449 Pfam PF13360 PQQ-like domain 163 271 1.3E-10 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB2474 7a6a80659a41810d071d52ad45e8364d 265 Pfam PF00534 Glycosyl transferases group 1 81 244 5.3E-34 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB2474 7a6a80659a41810d071d52ad45e8364d 265 SUPERFAMILY SSF53756 26 261 1.26E-49 T 11-11-2016 RB2474 7a6a80659a41810d071d52ad45e8364d 265 Gene3D G3DSA:3.40.50.2000 83 243 3.0E-23 T 11-11-2016 RB6747 80d2daf24bf212a08b5a5e7d19840a96 332 SUPERFAMILY SSF102114 33 327 3.79E-32 T 11-11-2016 RB6747 80d2daf24bf212a08b5a5e7d19840a96 332 Pfam PF12345 Protein of unknown function (DUF3641) 197 329 8.5E-52 T 11-11-2016 IPR024521 Domain of unknown function DUF3641 RB6747 80d2daf24bf212a08b5a5e7d19840a96 332 Gene3D G3DSA:3.20.20.70 30 328 3.1E-20 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6747 80d2daf24bf212a08b5a5e7d19840a96 332 Pfam PF04055 Radical SAM superfamily 40 185 6.9E-8 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB6747 80d2daf24bf212a08b5a5e7d19840a96 332 TIGRFAM TIGR04167 rSAM_SeCys: radical SAM/Cys-rich domain protein 29 330 6.4E-127 T 11-11-2016 IPR026351 Radical SAM/Cys-rich domain protein RB2435 95ad4b53fbfc67dfe1869e93f6bb01f5 358 SUPERFAMILY SSF56219 37 356 1.83E-27 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB2435 95ad4b53fbfc67dfe1869e93f6bb01f5 358 Gene3D G3DSA:3.60.10.10 40 356 5.4E-10 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB2435 95ad4b53fbfc67dfe1869e93f6bb01f5 358 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 42 348 2.9E-14 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB4739 0bf1582581f2a499060267178814f301 513 SUPERFAMILY SSF52540 404 502 4.53E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4739 0bf1582581f2a499060267178814f301 513 SUPERFAMILY SSF52540 338 375 4.53E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4739 0bf1582581f2a499060267178814f301 513 SUPERFAMILY SSF56112 14 328 1.87E-21 T 11-11-2016 IPR011009 Protein kinase-like domain RB4739 0bf1582581f2a499060267178814f301 513 Pfam PF13671 AAA domain 342 491 2.3E-35 T 11-11-2016 RB4739 0bf1582581f2a499060267178814f301 513 Gene3D G3DSA:3.40.50.300 340 473 1.0E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4739 0bf1582581f2a499060267178814f301 513 Gene3D G3DSA:3.90.1200.10 147 308 1.9E-6 T 11-11-2016 RB1722 ec21193cd39446fc3431df52f646c884 651 Pfam PF01345 Domain of unknown function DUF11 529 584 8.4E-7 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB1722 ec21193cd39446fc3431df52f646c884 651 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 546 583 7.2E-7 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB754 93dd915fdd75c44cf31aa3634e3e532a 364 Pfam PF10531 SLBB domain 173 216 2.2E-9 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB754 93dd915fdd75c44cf31aa3634e3e532a 364 Gene3D G3DSA:3.30.1950.10 89 131 6.6E-6 T 11-11-2016 RB754 93dd915fdd75c44cf31aa3634e3e532a 364 Gene3D G3DSA:3.10.560.10 171 255 2.1E-15 T 11-11-2016 RB9530 271e24ea024b4c1681b1cc6158b5b123 538 SUPERFAMILY SSF53649 74 528 1.44E-100 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9530 271e24ea024b4c1681b1cc6158b5b123 538 Pfam PF00884 Sulfatase 76 414 4.8E-58 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9530 271e24ea024b4c1681b1cc6158b5b123 538 Gene3D G3DSA:3.30.1120.10 456 532 1.3E-6 T 11-11-2016 RB9530 271e24ea024b4c1681b1cc6158b5b123 538 Gene3D G3DSA:3.40.720.10 74 455 4.0E-85 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9530 271e24ea024b4c1681b1cc6158b5b123 538 Pfam PF14707 C-terminal region of aryl-sulfatase 442 532 2.7E-7 T 11-11-2016 RB8061 02cfeb31a64e7c7b723e0f20d9f1c2b7 423 SUPERFAMILY SSF55729 51 154 2.71E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB8061 02cfeb31a64e7c7b723e0f20d9f1c2b7 423 SUPERFAMILY SSF55729 182 410 2.71E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB8061 02cfeb31a64e7c7b723e0f20d9f1c2b7 423 Gene3D G3DSA:3.40.630.30 253 407 2.5E-5 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB6417 295e772d7810a35dd07372795264c15b 249 SUPERFAMILY SSF49879 18 122 9.95E-25 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB6417 295e772d7810a35dd07372795264c15b 249 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 36 126 4.9E-19 T 11-11-2016 IPR032030 YscD, cytoplasmic domain RB6417 295e772d7810a35dd07372795264c15b 249 Gene3D G3DSA:2.60.200.20 28 119 2.3E-23 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB6417 295e772d7810a35dd07372795264c15b 249 SMART SM00240 53 103 2.7E-12 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB4654 0d665b95793514c8bfa3fa9a889a3afd 334 SUPERFAMILY SSF51658 3 313 3.4E-61 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB4654 0d665b95793514c8bfa3fa9a889a3afd 334 Pfam PF07582 AP endonuclease family 2 C terminus 274 328 1.3E-23 T 11-11-2016 IPR011418 AP endonuclease, family 2, C-terminal RB4654 0d665b95793514c8bfa3fa9a889a3afd 334 Pfam PF01261 Xylose isomerase-like TIM barrel 24 272 6.7E-44 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB4654 0d665b95793514c8bfa3fa9a889a3afd 334 Gene3D G3DSA:3.20.20.150 2 316 1.7E-77 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB7661 36eab5f327a8751edc80f05f47ee91ee 362 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 348 52.502 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 RB7661 36eab5f327a8751edc80f05f47ee91ee 362 Gene3D G3DSA:3.40.640.10 36 249 5.4E-56 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB7661 36eab5f327a8751edc80f05f47ee91ee 362 Pfam PF00155 Aminotransferase class I and II 23 338 6.5E-45 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RB7661 36eab5f327a8751edc80f05f47ee91ee 362 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 4 345 4.1E-89 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 RB7661 36eab5f327a8751edc80f05f47ee91ee 362 SUPERFAMILY SSF53383 4 347 2.75E-74 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB7661 36eab5f327a8751edc80f05f47ee91ee 362 Gene3D G3DSA:3.90.1150.10 250 348 1.8E-20 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB7661 36eab5f327a8751edc80f05f47ee91ee 362 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 PIRSF PIRSF001529 1 424 4.0E-133 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 423 36.85 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 SUPERFAMILY SSF55681 126 421 2.24E-76 T 11-11-2016 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 Gene3D G3DSA:1.10.287.40 1 102 1.7E-20 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 8.5E-135 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 6.5E-28 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 6.5E-28 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 6.5E-28 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 6.5E-28 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 352 368 6.5E-28 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 1.0E-19 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 Gene3D G3DSA:3.30.930.10 104 420 4.9E-119 T 11-11-2016 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 401 5.1E-25 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB1039 d31b3d2e016327d9b68dec34b834e23c 426 SUPERFAMILY SSF46589 1 111 1.36E-24 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 RB7299 65efc106dd3df48757254e24bea0d888 405 Gene3D G3DSA:3.30.1490.20 111 171 1.8E-7 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB7299 65efc106dd3df48757254e24bea0d888 405 Pfam PF08443 RimK-like ATP-grasp domain 98 285 9.7E-58 T 11-11-2016 IPR013651 ATP-grasp fold, RimK-type RB7299 65efc106dd3df48757254e24bea0d888 405 SUPERFAMILY SSF56059 98 286 3.54E-47 T 11-11-2016 RB7299 65efc106dd3df48757254e24bea0d888 405 SUPERFAMILY SSF116726 298 373 3.01E-13 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB7299 65efc106dd3df48757254e24bea0d888 405 Gene3D G3DSA:3.30.470.20 172 277 4.5E-33 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB7299 65efc106dd3df48757254e24bea0d888 405 Pfam PF02080 TrkA-C domain 309 370 3.2E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB7299 65efc106dd3df48757254e24bea0d888 405 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 285 1.7E-74 T 11-11-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 RB7299 65efc106dd3df48757254e24bea0d888 405 Gene3D G3DSA:3.30.70.1450 305 373 5.2E-12 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB7299 65efc106dd3df48757254e24bea0d888 405 Gene3D G3DSA:3.40.50.20 7 110 3.5E-16 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB8861 cddb6e76629477318cc27641b55b2b91 492 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 105 460 2.2E-44 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 SUPERFAMILY SSF52540 194 436 4.38E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 SMART SM00382 229 368 5.7E-24 T 11-11-2016 IPR003593 AAA+ ATPase domain RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 150 635 2.6E-211 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 SUPERFAMILY SSF140990 449 638 3.66E-67 T 11-11-2016 RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 Gene3D G3DSA:3.40.50.300 194 364 4.0E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 ProSitePatterns PS00674 AAA-protein family signature. 336 354 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 365 6.5E-44 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 26 662 35.049 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 Gene3D G3DSA:1.10.8.60 367 441 2.9E-23 T 11-11-2016 RB2966 1c5062a5dd3c2c0e87ded24ff83f729d 672 Pfam PF01434 Peptidase family M41 427 634 6.1E-75 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RB457 e20f63dfb0994a7944b9a202dd21d3c2 392 SUPERFAMILY SSF52540 1 136 3.25E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB457 e20f63dfb0994a7944b9a202dd21d3c2 392 SUPERFAMILY SSF52540 198 352 3.25E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB457 e20f63dfb0994a7944b9a202dd21d3c2 392 Gene3D G3DSA:3.40.50.300 1 121 1.5E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB457 e20f63dfb0994a7944b9a202dd21d3c2 392 Gene3D G3DSA:3.40.50.300 174 351 1.5E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB457 e20f63dfb0994a7944b9a202dd21d3c2 392 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 333 2.8E-35 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB874 cb24484d2301f2fdb3b4721ff2a63af1 550 Gene3D G3DSA:2.130.10.130 220 344 1.8E-14 T 11-11-2016 RB874 cb24484d2301f2fdb3b4721ff2a63af1 550 Gene3D G3DSA:2.130.10.130 449 549 6.2E-10 T 11-11-2016 RB874 cb24484d2301f2fdb3b4721ff2a63af1 550 Gene3D G3DSA:2.130.10.130 345 411 1.5E-4 T 11-11-2016 RB874 cb24484d2301f2fdb3b4721ff2a63af1 550 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 345 408 4.3E-8 T 11-11-2016 RB874 cb24484d2301f2fdb3b4721ff2a63af1 550 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 223 292 1.2E-8 T 11-11-2016 RB874 cb24484d2301f2fdb3b4721ff2a63af1 550 SUPERFAMILY SSF69318 187 530 4.19E-46 T 11-11-2016 RB11930 1f450fc08745ec07324675cae392635d 324 Pfam PF00005 ABC transporter 42 184 7.2E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB11930 1f450fc08745ec07324675cae392635d 324 SUPERFAMILY SSF52540 16 245 2.4E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11930 1f450fc08745ec07324675cae392635d 324 SMART SM00382 50 232 3.8E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11930 1f450fc08745ec07324675cae392635d 324 Gene3D G3DSA:3.40.50.300 23 245 3.5E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5195 5f97947a611c8b41e4308187b5f9eb0f 505 ProSitePatterns PS00523 Sulfatases signature 1. 85 97 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB5195 5f97947a611c8b41e4308187b5f9eb0f 505 SUPERFAMILY SSF53649 37 394 1.89E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5195 5f97947a611c8b41e4308187b5f9eb0f 505 SUPERFAMILY SSF53649 440 495 1.89E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5195 5f97947a611c8b41e4308187b5f9eb0f 505 Gene3D G3DSA:3.40.720.10 38 387 1.2E-90 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5195 5f97947a611c8b41e4308187b5f9eb0f 505 Gene3D G3DSA:3.30.1120.10 430 496 2.1E-14 T 11-11-2016 RB5195 5f97947a611c8b41e4308187b5f9eb0f 505 Pfam PF00884 Sulfatase 39 358 9.3E-59 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB7078 89a0402d00cde9b6ff06fe9314ce8e6f 677 SUPERFAMILY SSF56954 160 224 3.53E-38 T 11-11-2016 RB7078 89a0402d00cde9b6ff06fe9314ce8e6f 677 SUPERFAMILY SSF56954 281 668 3.53E-38 T 11-11-2016 RB7078 89a0402d00cde9b6ff06fe9314ce8e6f 677 Gene3D G3DSA:1.20.1600.10 317 503 7.5E-28 T 11-11-2016 RB7078 89a0402d00cde9b6ff06fe9314ce8e6f 677 Gene3D G3DSA:1.20.1600.10 553 664 7.5E-28 T 11-11-2016 RB7078 89a0402d00cde9b6ff06fe9314ce8e6f 677 Gene3D G3DSA:1.20.1600.10 168 195 7.5E-28 T 11-11-2016 RB7078 89a0402d00cde9b6ff06fe9314ce8e6f 677 Pfam PF02321 Outer membrane efflux protein 467 664 6.1E-18 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB7839 6f0d0d9629a41b362100322c1e458f6f 119 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 111 3.5E-34 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7839 6f0d0d9629a41b362100322c1e458f6f 119 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 116 24.087 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7839 6f0d0d9629a41b362100322c1e458f6f 119 Pfam PF00237 Ribosomal protein L22p/L17e 9 113 8.3E-27 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RB7839 6f0d0d9629a41b362100322c1e458f6f 119 Gene3D G3DSA:3.90.470.10 4 116 1.6E-30 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RB7839 6f0d0d9629a41b362100322c1e458f6f 119 SUPERFAMILY SSF54843 5 117 8.37E-32 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 12 539 46.247 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 Pfam PF01676 Metalloenzyme superfamily 13 527 3.6E-71 T 11-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 PIRSF PIRSF001492 6 541 1.1E-203 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 13 538 2.6E-187 T 11-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 Gene3D G3DSA:3.40.1450.10 89 333 1.4E-78 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 Gene3D G3DSA:3.40.720.10 339 539 1.0E-81 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 Gene3D G3DSA:3.40.720.10 12 88 1.0E-81 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 SUPERFAMILY SSF53649 339 538 4.71E-70 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 SUPERFAMILY SSF53649 11 88 4.71E-70 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 SUPERFAMILY SSF64158 88 332 8.11E-71 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB8562 89405588bfaed75dfeea6827eb9dbb6a 543 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 93 322 1.5E-68 T 11-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 SMART SM00649 9 140 5.1E-70 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 66 2.8E-25 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 11-11-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 29.113 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 Gene3D G3DSA:3.30.1550.10 2 71 5.9E-31 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 73 5.0E-15 T 11-11-2016 RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 SUPERFAMILY SSF54747 3 71 4.71E-26 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 3.4E-22 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 SUPERFAMILY SSF46906 67 140 3.27E-24 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 Gene3D G3DSA:1.10.10.250 72 140 1.6E-28 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RB7899 e8eccf734334bf1f4d6474bd4b88820d 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 5.5E-55 T 11-11-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB9998 0d05a540b0717447483fe787f57915d9 277 Pfam PF00005 ABC transporter 26 184 1.0E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB9998 0d05a540b0717447483fe787f57915d9 277 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 11 256 1.3E-96 T 11-11-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 RB9998 0d05a540b0717447483fe787f57915d9 277 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB9998 0d05a540b0717447483fe787f57915d9 277 Gene3D G3DSA:3.40.50.300 7 252 3.2E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9998 0d05a540b0717447483fe787f57915d9 277 SMART SM00382 35 237 6.8E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9998 0d05a540b0717447483fe787f57915d9 277 SUPERFAMILY SSF52540 9 243 1.57E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5015 f27fa8a2383f0502395386a372cb9ead 234 Pfam PF00583 Acetyltransferase (GNAT) family 117 192 3.1E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB5015 f27fa8a2383f0502395386a372cb9ead 234 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 82 211 3.7E-32 T 11-11-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 RB5015 f27fa8a2383f0502395386a372cb9ead 234 Gene3D G3DSA:3.40.630.30 73 215 3.9E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB5015 f27fa8a2383f0502395386a372cb9ead 234 SUPERFAMILY SSF55729 73 213 1.96E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB10829 d7d5499877f4baff7fd690f6999deaf5 195 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-11-2016 IPR033135 ClpP, histidine active site RB10829 d7d5499877f4baff7fd690f6999deaf5 195 SUPERFAMILY SSF52096 12 193 1.62E-72 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB10829 d7d5499877f4baff7fd690f6999deaf5 195 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 4.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10829 d7d5499877f4baff7fd690f6999deaf5 195 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 4.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10829 d7d5499877f4baff7fd690f6999deaf5 195 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 4.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10829 d7d5499877f4baff7fd690f6999deaf5 195 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 4.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10829 d7d5499877f4baff7fd690f6999deaf5 195 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 4.5E-54 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10829 d7d5499877f4baff7fd690f6999deaf5 195 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 42.593 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10829 d7d5499877f4baff7fd690f6999deaf5 195 Pfam PF00574 Clp protease 13 192 3.4E-86 T 11-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RB10829 d7d5499877f4baff7fd690f6999deaf5 195 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 11-11-2016 IPR018215 ClpP, Ser active site RB10829 d7d5499877f4baff7fd690f6999deaf5 195 Gene3D G3DSA:3.90.226.10 4 191 2.7E-85 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB10829 d7d5499877f4baff7fd690f6999deaf5 195 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 2 191 4.2E-95 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB767 91cd3b14ef62647e8adc973287d89ca4 311 Gene3D G3DSA:2.120.10.30 57 289 7.9E-12 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB767 91cd3b14ef62647e8adc973287d89ca4 311 SUPERFAMILY SSF63829 56 288 5.04E-17 T 11-11-2016 RB4873 2dfd1fb158214bc449ee897029f548a8 288 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 57 1.2E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4873 2dfd1fb158214bc449ee897029f548a8 288 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 65 88 1.2E-7 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4873 2dfd1fb158214bc449ee897029f548a8 288 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 90 1.9E-11 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RB4873 2dfd1fb158214bc449ee897029f548a8 288 Gene3D G3DSA:1.10.357.10 30 222 9.4E-25 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RB4873 2dfd1fb158214bc449ee897029f548a8 288 SUPERFAMILY SSF46689 34 103 8.48E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4547 d712a67176be028eb38d20f964cab4c0 422 Gene3D G3DSA:1.25.40.20 247 301 6.1E-7 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB4547 d712a67176be028eb38d20f964cab4c0 422 SUPERFAMILY SSF48403 244 303 4.97E-7 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB4547 d712a67176be028eb38d20f964cab4c0 422 Pfam PF13606 Ankyrin repeat 270 298 9.6E-5 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB4547 d712a67176be028eb38d20f964cab4c0 422 SMART SM00248 269 298 5.9E-5 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB7739 51f81bfd001bcff357553bc26df1c779 514 Gene3D G3DSA:1.25.10.10 59 163 1.3E-7 T 11-11-2016 IPR011989 Armadillo-like helical RB7739 51f81bfd001bcff357553bc26df1c779 514 Gene3D G3DSA:1.25.10.10 229 298 1.3E-7 T 11-11-2016 IPR011989 Armadillo-like helical RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 Gene3D G3DSA:2.130.10.10 806 1080 2.3E-22 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 215 227 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00220 96 392 2.2E-55 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 Gene3D G3DSA:2.130.10.10 524 805 2.1E-37 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 885 923 160.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 641 677 110.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 557 596 1.1E-6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 725 764 8.9 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 515 553 11.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 599 636 24.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 774 816 16.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 971 1007 54.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SMART SM00320 1010 1048 0.57 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 Pfam PF00400 WD domain, G-beta repeat 562 596 0.0011 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 102 126 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SUPERFAMILY SSF82171 792 1089 9.42E-25 T 11-11-2016 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 Gene3D G3DSA:1.10.510.10 204 389 1.4E-38 T 11-11-2016 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SUPERFAMILY SSF50978 524 820 6.23E-42 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 SUPERFAMILY SSF56112 88 407 6.61E-64 T 11-11-2016 IPR011009 Protein kinase-like domain RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 Pfam PF00069 Protein kinase domain 96 380 1.2E-43 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB10160 85c4b29f7e202b32e7453f843f54dd65 1097 Gene3D G3DSA:3.30.200.20 88 203 2.4E-22 T 11-11-2016 RB5468 24027956f99591f1b4351b24ef73a0ac 332 SUPERFAMILY SSF53474 122 217 3.21E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5468 24027956f99591f1b4351b24ef73a0ac 332 SUPERFAMILY SSF53474 258 330 3.21E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5468 24027956f99591f1b4351b24ef73a0ac 332 Gene3D G3DSA:3.40.50.1820 127 315 9.3E-13 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2833 9d1ff67a5aee98db3e513e5bed2f82d5 462 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 54 172 1.2E-17 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB2833 9d1ff67a5aee98db3e513e5bed2f82d5 462 SUPERFAMILY SSF55347 180 209 3.05E-14 T 11-11-2016 RB2833 9d1ff67a5aee98db3e513e5bed2f82d5 462 SUPERFAMILY SSF55347 252 403 3.05E-14 T 11-11-2016 RB2833 9d1ff67a5aee98db3e513e5bed2f82d5 462 Gene3D G3DSA:3.40.50.720 52 212 1.5E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2833 9d1ff67a5aee98db3e513e5bed2f82d5 462 Gene3D G3DSA:3.40.50.720 247 296 1.5E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2833 9d1ff67a5aee98db3e513e5bed2f82d5 462 SUPERFAMILY SSF51735 41 204 1.6E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB88 79c1adec6731a98e4448cc69901dd5c8 470 Gene3D G3DSA:3.60.21.10 183 464 1.8E-21 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB88 79c1adec6731a98e4448cc69901dd5c8 470 Pfam PF09423 PhoD-like phosphatase 175 418 4.6E-23 T 11-11-2016 IPR018946 Alkaline phosphatase D-related RB88 79c1adec6731a98e4448cc69901dd5c8 470 SUPERFAMILY SSF56300 182 461 1.73E-23 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB6458 92e1f068bbd4ac9e514bee2504430f47 271 Pfam PF13633 Prokaryotic N-terminal methylation site 18 43 1.7E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6458 92e1f068bbd4ac9e514bee2504430f47 271 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 39 3.4E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6458 92e1f068bbd4ac9e514bee2504430f47 271 SUPERFAMILY SSF54523 20 140 1.02E-21 T 11-11-2016 RB6458 92e1f068bbd4ac9e514bee2504430f47 271 Gene3D G3DSA:3.30.700.10 20 78 5.1E-7 T 11-11-2016 RB6458 92e1f068bbd4ac9e514bee2504430f47 271 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6458 92e1f068bbd4ac9e514bee2504430f47 271 Pfam PF07596 Protein of unknown function (DUF1559) 209 254 1.4E-6 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6458 92e1f068bbd4ac9e514bee2504430f47 271 Pfam PF07596 Protein of unknown function (DUF1559) 44 208 5.2E-50 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB3751 d2094afb9a416b9d56ad94f315c5b03e 371 PRINTS PR01713 Nucleotide sugar epimerase signature 291 306 2.2E-5 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RB3751 d2094afb9a416b9d56ad94f315c5b03e 371 PRINTS PR01713 Nucleotide sugar epimerase signature 330 347 2.2E-5 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RB3751 d2094afb9a416b9d56ad94f315c5b03e 371 PRINTS PR01713 Nucleotide sugar epimerase signature 268 283 2.2E-5 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RB3751 d2094afb9a416b9d56ad94f315c5b03e 371 Pfam PF01370 NAD dependent epimerase/dehydratase family 57 297 3.6E-60 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB3751 d2094afb9a416b9d56ad94f315c5b03e 371 Gene3D G3DSA:3.40.50.720 50 231 3.4E-51 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3751 d2094afb9a416b9d56ad94f315c5b03e 371 SUPERFAMILY SSF51735 52 366 1.36E-92 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3751 d2094afb9a416b9d56ad94f315c5b03e 371 Gene3D G3DSA:3.90.25.10 232 353 3.7E-34 T 11-11-2016 RB4115 c2b62005116b01a597f1d072ceae3575 351 Pfam PF00805 Pentapeptide repeats (8 copies) 271 308 7.4E-13 T 11-11-2016 IPR001646 Pentapeptide repeat RB4115 c2b62005116b01a597f1d072ceae3575 351 Gene3D G3DSA:3.90.420.10 10 215 1.3E-44 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 RB4115 c2b62005116b01a597f1d072ceae3575 351 SUPERFAMILY SSF141571 214 317 3.14E-26 T 11-11-2016 RB4115 c2b62005116b01a597f1d072ceae3575 351 SUPERFAMILY SSF56524 10 200 3.66E-51 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 RB4115 c2b62005116b01a597f1d072ceae3575 351 Pfam PF00174 Oxidoreductase molybdopterin binding domain 38 181 2.1E-32 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 RB10305 862b2615137787471ae64a637b32d404 106 Gene3D G3DSA:1.10.238.120 3 103 6.4E-32 T 11-11-2016 IPR023154 Jann4075-like domain RB10305 862b2615137787471ae64a637b32d404 106 SUPERFAMILY SSF158587 3 103 4.71E-31 T 11-11-2016 IPR023154 Jann4075-like domain RB10305 862b2615137787471ae64a637b32d404 106 Pfam PF11015 Protein of unknown function (DUF2853) 5 101 3.5E-30 T 11-11-2016 IPR021274 Protein of unknown function DUF2853 RB3036 8e6c4b824e188f431ee0f1c99d17a799 496 Pfam PF07586 Protein of unknown function (DUF1552) 97 389 2.2E-30 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB3036 8e6c4b824e188f431ee0f1c99d17a799 496 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 59 89 8.3E-4 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RB8687 a6c1e85b276f544e9b460dd8bfff387c 802 SUPERFAMILY SSF55166 617 798 1.02E-54 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 RB8687 a6c1e85b276f544e9b460dd8bfff387c 802 Pfam PF01427 D-ala-D-ala dipeptidase 620 786 7.4E-32 T 11-11-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 RB8687 a6c1e85b276f544e9b460dd8bfff387c 802 SUPERFAMILY SSF56601 52 379 8.25E-80 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like RB8687 a6c1e85b276f544e9b460dd8bfff387c 802 Gene3D G3DSA:3.40.710.10 48 376 3.8E-82 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like RB8687 a6c1e85b276f544e9b460dd8bfff387c 802 Pfam PF00144 Beta-lactamase 58 374 1.7E-67 T 11-11-2016 IPR001466 Beta-lactamase-related RB8687 a6c1e85b276f544e9b460dd8bfff387c 802 Gene3D G3DSA:3.30.1380.10 618 788 3.4E-53 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 RB8687 a6c1e85b276f544e9b460dd8bfff387c 802 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 619 796 25.392 T 11-11-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 RB11875 6564273d71f6192847ff226ad405dac9 429 Pfam PF01636 Phosphotransferase enzyme family 30 334 4.6E-6 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase RB11875 6564273d71f6192847ff226ad405dac9 429 SUPERFAMILY SSF56112 25 193 3.06E-16 T 11-11-2016 IPR011009 Protein kinase-like domain RB11875 6564273d71f6192847ff226ad405dac9 429 SUPERFAMILY SSF56112 261 351 3.06E-16 T 11-11-2016 IPR011009 Protein kinase-like domain RB11875 6564273d71f6192847ff226ad405dac9 429 Gene3D G3DSA:3.90.1200.10 145 188 8.2E-9 T 11-11-2016 RB11875 6564273d71f6192847ff226ad405dac9 429 Gene3D G3DSA:3.90.1200.10 255 352 8.2E-9 T 11-11-2016 RB11024 43f29648ecb0ffed1c6b2195ded6c463 548 SUPERFAMILY SSF53474 299 541 2.91E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11024 43f29648ecb0ffed1c6b2195ded6c463 548 Pfam PF11806 Domain of unknown function (DUF3327) 193 299 7.0E-24 T 11-11-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 RB11024 43f29648ecb0ffed1c6b2195ded6c463 548 SUPERFAMILY SSF81296 159 295 8.96E-33 T 11-11-2016 IPR014756 Immunoglobulin E-set RB11024 43f29648ecb0ffed1c6b2195ded6c463 548 Pfam PF00756 Putative esterase 318 543 7.3E-24 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 RB11024 43f29648ecb0ffed1c6b2195ded6c463 548 Gene3D G3DSA:2.60.40.10 159 275 3.5E-27 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB11024 43f29648ecb0ffed1c6b2195ded6c463 548 Gene3D G3DSA:3.40.50.1820 305 546 1.5E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB162 f812441d8318dbd92ca142c2c33ced82 308 SUPERFAMILY SSF53335 25 272 3.5E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB162 f812441d8318dbd92ca142c2c33ced82 308 Gene3D G3DSA:3.40.50.150 42 267 3.9E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB162 f812441d8318dbd92ca142c2c33ced82 308 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 129 217 9.1E-8 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RB6615 244902d2956ab4060581b88a09430e6a 230 Pfam PF06439 Domain of Unknown Function (DUF1080) 40 226 1.5E-38 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB7117 b70abf23ccd17596e711055b54778bb9 181 SUPERFAMILY SSF143034 117 176 1.06E-14 T 11-11-2016 RB7117 b70abf23ccd17596e711055b54778bb9 181 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 117 176 7.6E-15 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RB7117 b70abf23ccd17596e711055b54778bb9 181 PRINTS PR00064 Ribosomal protein L35 signature 135 149 1.7E-9 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RB7117 b70abf23ccd17596e711055b54778bb9 181 PRINTS PR00064 Ribosomal protein L35 signature 150 168 1.7E-9 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RB7117 b70abf23ccd17596e711055b54778bb9 181 PRINTS PR00064 Ribosomal protein L35 signature 117 134 1.7E-9 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RB7117 b70abf23ccd17596e711055b54778bb9 181 Pfam PF01632 Ribosomal protein L35 117 173 2.9E-14 T 11-11-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7117 b70abf23ccd17596e711055b54778bb9 181 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 115 178 12.072 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RB12138 a2ee5313414f4f6c4f335a01405c75d3 428 SUPERFAMILY SSF102114 107 356 4.05E-52 T 11-11-2016 RB12138 a2ee5313414f4f6c4f335a01405c75d3 428 Gene3D G3DSA:3.80.30.20 127 363 6.9E-64 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB12138 a2ee5313414f4f6c4f335a01405c75d3 428 Pfam PF00919 Uncharacterized protein family UPF0004 5 97 1.9E-23 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RB12138 a2ee5313414f4f6c4f335a01405c75d3 428 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 402 1.1E-110 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RB12138 a2ee5313414f4f6c4f335a01405c75d3 428 SMART SM00729 127 352 5.0E-44 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB12138 a2ee5313414f4f6c4f335a01405c75d3 428 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 8 399 6.5E-121 T 11-11-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 RB12138 a2ee5313414f4f6c4f335a01405c75d3 428 Pfam PF04055 Radical SAM superfamily 132 308 5.6E-25 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB10255 fb7ef7155b2d25e10b1d8aa8f110a63d 337 Gene3D G3DSA:3.30.70.100 211 298 5.7E-16 T 11-11-2016 RB10255 fb7ef7155b2d25e10b1d8aa8f110a63d 337 SUPERFAMILY SSF82861 63 141 1.57E-10 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RB10255 fb7ef7155b2d25e10b1d8aa8f110a63d 337 Pfam PF00924 Mechanosensitive ion channel 100 300 4.4E-45 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RB10255 fb7ef7155b2d25e10b1d8aa8f110a63d 337 SUPERFAMILY SSF82689 210 311 1.2E-21 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RB10255 fb7ef7155b2d25e10b1d8aa8f110a63d 337 SUPERFAMILY SSF50182 143 208 1.67E-17 T 11-11-2016 IPR010920 LSM domain RB10255 fb7ef7155b2d25e10b1d8aa8f110a63d 337 Gene3D G3DSA:2.30.30.60 158 206 1.9E-18 T 11-11-2016 RB13209 55ec1fab719a31058ea37fb201cc7cff 145 Pfam PF00892 EamA-like transporter family 7 141 1.6E-19 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RB13209 55ec1fab719a31058ea37fb201cc7cff 145 SUPERFAMILY SSF103481 47 144 7.45E-15 T 11-11-2016 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Pfam PF00404 Dockerin type I repeat 1723 1742 2.2E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Pfam PF00404 Dockerin type I repeat 1691 1711 4.4E-6 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 ProSitePatterns PS00786 5'-nucleotidase signature 2. 157 168 - T 11-11-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 SUPERFAMILY SSF63446 1690 1743 3.34E-9 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 SUPERFAMILY SSF75011 787 1130 2.88E-16 T 11-11-2016 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 SUPERFAMILY SSF75011 1160 1191 2.88E-16 T 11-11-2016 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Gene3D G3DSA:1.10.1330.10 1691 1740 1.3E-6 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1619 1631 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Pfam PF02872 5'-nucleotidase, C-terminal domain 465 676 2.2E-21 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 SUPERFAMILY SSF56300 144 209 2.8E-43 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 SUPERFAMILY SSF56300 53 115 2.8E-43 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 SUPERFAMILY SSF56300 238 404 2.8E-43 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Gene3D G3DSA:2.130.10.10 957 1049 9.5E-16 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Gene3D G3DSA:2.130.10.10 1107 1200 9.5E-16 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Gene3D G3DSA:2.130.10.10 764 923 9.5E-16 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1585 1597 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 SUPERFAMILY SSF55816 462 689 1.02E-27 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Gene3D G3DSA:3.90.780.10 465 740 1.4E-37 T 11-11-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 RB1934 d239e7f1d489e6e5d95d61808a581c0b 1826 Gene3D G3DSA:3.60.21.10 54 406 1.8E-66 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 2025 2077 3.3E-6 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 3353 3462 7.3E-19 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 2497 2606 3.0E-18 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 3075 3097 7.1 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 2165 2186 7200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 3284 3338 7200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 2985 3007 6100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 3740 3761 9900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 1407 1429 3500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 1750 1772 4400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 1360 1382 1100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 SMART SM00710 5560 5581 1800.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 Pfam PF00404 Dockerin type I repeat 6002 6022 2.1E-6 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 Pfam PF07595 Planctomycete extracellular 36 58 1.9E-4 T 11-11-2016 IPR011506 Planctomycete extracellular RB7321 a00d74c7f80820a1b4b32d47f44f2e60 6157 Gene3D G3DSA:2.60.120.380 2001 2072 1.8E-5 T 11-11-2016 RB1122 1effb03b1308a8eac0fbf7edcfd5c57a 449 Gene3D G3DSA:2.40.50.100 62 98 1.5E-6 T 11-11-2016 RB1122 1effb03b1308a8eac0fbf7edcfd5c57a 449 Gene3D G3DSA:2.40.50.100 271 308 1.5E-6 T 11-11-2016 RB1122 1effb03b1308a8eac0fbf7edcfd5c57a 449 Pfam PF13437 HlyD family secretion protein 279 340 5.9E-10 T 11-11-2016 RB12774 7e0174508770a85ead2e7705e0d7691c 596 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 68 171 2.8E-24 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RB12774 7e0174508770a85ead2e7705e0d7691c 596 SMART SM00382 345 497 0.0017 T 11-11-2016 IPR003593 AAA+ ATPase domain RB12774 7e0174508770a85ead2e7705e0d7691c 596 Pfam PF00437 Type II/IV secretion system protein 223 484 1.4E-75 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB12774 7e0174508770a85ead2e7705e0d7691c 596 SUPERFAMILY SSF160246 25 167 1.57E-35 T 11-11-2016 RB12774 7e0174508770a85ead2e7705e0d7691c 596 SUPERFAMILY SSF52540 203 590 7.27E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12774 7e0174508770a85ead2e7705e0d7691c 596 Gene3D G3DSA:3.40.50.300 323 592 9.6E-94 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12774 7e0174508770a85ead2e7705e0d7691c 596 Gene3D G3DSA:3.30.450.90 194 317 2.6E-44 T 11-11-2016 RB12774 7e0174508770a85ead2e7705e0d7691c 596 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 412 426 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB8983 910a00820503f2052b73fbc66bf9fc01 346 Gene3D G3DSA:3.40.50.300 47 213 4.1E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8983 910a00820503f2052b73fbc66bf9fc01 346 Gene3D G3DSA:1.10.8.300 229 344 1.7E-29 T 11-11-2016 RB8983 910a00820503f2052b73fbc66bf9fc01 346 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 65 197 2.7E-62 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB8983 910a00820503f2052b73fbc66bf9fc01 346 SUPERFAMILY SSF52540 34 320 4.62E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8983 910a00820503f2052b73fbc66bf9fc01 346 PIRSF PIRSF002849 2 346 1.6E-119 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB1323 e1b152a6823be5cbc73fa181a60a57c0 429 Pfam PF05977 Transmembrane secretion effector 30 425 8.9E-114 T 11-11-2016 IPR010290 Transmembrane secretion effector RB1323 e1b152a6823be5cbc73fa181a60a57c0 429 SUPERFAMILY SSF103473 36 421 1.7E-51 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB1323 e1b152a6823be5cbc73fa181a60a57c0 429 Gene3D G3DSA:1.20.1250.20 36 223 3.5E-20 T 11-11-2016 RB1323 e1b152a6823be5cbc73fa181a60a57c0 429 Gene3D G3DSA:1.20.1250.20 244 421 1.6E-15 T 11-11-2016 RB7834 1061ecd002757ae7447ee3a94a6f8c31 222 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 8.1E-55 T 11-11-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RB7834 1061ecd002757ae7447ee3a94a6f8c31 222 Gene3D G3DSA:3.40.1370.10 58 204 2.1E-46 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RB7834 1061ecd002757ae7447ee3a94a6f8c31 222 SUPERFAMILY SSF52166 1 204 5.1E-61 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RB7834 1061ecd002757ae7447ee3a94a6f8c31 222 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 208 28.21 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7834 1061ecd002757ae7447ee3a94a6f8c31 222 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 6.9E-63 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB3542 2bf194aa7b5bc7fae32b86df8411dd02 410 Pfam PF13633 Prokaryotic N-terminal methylation site 9 34 6.4E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3542 2bf194aa7b5bc7fae32b86df8411dd02 410 Pfam PF07596 Protein of unknown function (DUF1559) 35 371 6.8E-66 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB3542 2bf194aa7b5bc7fae32b86df8411dd02 410 Gene3D G3DSA:3.30.700.10 11 78 5.2E-7 T 11-11-2016 RB3542 2bf194aa7b5bc7fae32b86df8411dd02 410 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 1.0E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3542 2bf194aa7b5bc7fae32b86df8411dd02 410 SUPERFAMILY SSF54523 11 175 6.2E-27 T 11-11-2016 RB3542 2bf194aa7b5bc7fae32b86df8411dd02 410 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB4619 ed749a25b6d903a3652c02b0c0d08c54 481 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 244 270 0.04 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RB4619 ed749a25b6d903a3652c02b0c0d08c54 481 SUPERFAMILY SSF51735 41 202 2.96E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4619 ed749a25b6d903a3652c02b0c0d08c54 481 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 51 170 5.3E-16 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB4619 ed749a25b6d903a3652c02b0c0d08c54 481 SUPERFAMILY SSF55347 179 212 6.05E-15 T 11-11-2016 RB4619 ed749a25b6d903a3652c02b0c0d08c54 481 SUPERFAMILY SSF55347 246 303 6.05E-15 T 11-11-2016 RB4619 ed749a25b6d903a3652c02b0c0d08c54 481 Gene3D G3DSA:3.40.50.720 50 208 1.4E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4619 ed749a25b6d903a3652c02b0c0d08c54 481 Gene3D G3DSA:3.40.50.720 241 287 1.4E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10862 7bd9e8f97370bb5871b4532c337f23e9 381 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 138 216 1.3E-19 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 RB1656 98290b8569cae519262bf866453426c1 875 SMART SM00267 377 548 3.0E-51 T 11-11-2016 IPR000160 GGDEF domain RB1656 98290b8569cae519262bf866453426c1 875 Gene3D G3DSA:3.30.450.20 237 354 2.8E-15 T 11-11-2016 RB1656 98290b8569cae519262bf866453426c1 875 SUPERFAMILY SSF109604 576 753 7.97E-32 T 11-11-2016 RB1656 98290b8569cae519262bf866453426c1 875 SUPERFAMILY SSF55785 237 354 4.36E-14 T 11-11-2016 IPR000014 PAS domain RB1656 98290b8569cae519262bf866453426c1 875 TIGRFAM TIGR00277 HDIG: HDIG domain 591 682 3.2E-8 T 11-11-2016 IPR006675 HDIG domain RB1656 98290b8569cae519262bf866453426c1 875 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 237 360 1.3E-11 T 11-11-2016 IPR000014 PAS domain RB1656 98290b8569cae519262bf866453426c1 875 SMART SM00091 237 303 2.6E-4 T 11-11-2016 IPR000014 PAS domain RB1656 98290b8569cae519262bf866453426c1 875 Gene3D G3DSA:3.30.70.270 390 551 4.2E-50 T 11-11-2016 RB1656 98290b8569cae519262bf866453426c1 875 SUPERFAMILY SSF55073 393 550 3.45E-47 T 11-11-2016 IPR029787 Nucleotide cyclase RB1656 98290b8569cae519262bf866453426c1 875 Gene3D G3DSA:1.10.3210.10 586 754 2.6E-21 T 11-11-2016 IPR006674 HD domain RB1656 98290b8569cae519262bf866453426c1 875 Pfam PF00990 Diguanylate cyclase, GGDEF domain 388 544 2.0E-40 T 11-11-2016 IPR000160 GGDEF domain RB1656 98290b8569cae519262bf866453426c1 875 Pfam PF01966 HD domain 594 712 4.0E-16 T 11-11-2016 IPR006674 HD domain RB1656 98290b8569cae519262bf866453426c1 875 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 384 547 1.2E-47 T 11-11-2016 IPR000160 GGDEF domain RB1656 98290b8569cae519262bf866453426c1 875 SMART SM00471 589 723 4.6E-14 T 11-11-2016 IPR003607 HD/PDEase domain RB1656 98290b8569cae519262bf866453426c1 875 Pfam PF08448 PAS fold 243 355 7.0E-11 T 11-11-2016 IPR013656 PAS fold-4 RB4032 2f36837a5b7dccf87f29dc330f910c2a 481 Gene3D G3DSA:3.40.720.10 339 462 1.3E-7 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4032 2f36837a5b7dccf87f29dc330f910c2a 481 Pfam PF07394 Protein of unknown function (DUF1501) 61 480 1.0E-148 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB4032 2f36837a5b7dccf87f29dc330f910c2a 481 SUPERFAMILY SSF53649 289 473 3.4E-25 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5295 c0b804b3cb313a1c0bbc89615896bc6c 493 SUPERFAMILY SSF53649 408 453 3.05E-111 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5295 c0b804b3cb313a1c0bbc89615896bc6c 493 SUPERFAMILY SSF53649 22 370 3.05E-111 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5295 c0b804b3cb313a1c0bbc89615896bc6c 493 Pfam PF16347 Domain of unknown function (DUF4976) 405 451 2.3E-8 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB5295 c0b804b3cb313a1c0bbc89615896bc6c 493 Pfam PF00884 Sulfatase 23 312 1.1E-58 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB5295 c0b804b3cb313a1c0bbc89615896bc6c 493 Gene3D G3DSA:3.30.1120.10 341 372 1.1E-15 T 11-11-2016 RB5295 c0b804b3cb313a1c0bbc89615896bc6c 493 Gene3D G3DSA:3.30.1120.10 410 457 1.1E-15 T 11-11-2016 RB5295 c0b804b3cb313a1c0bbc89615896bc6c 493 ProSitePatterns PS00149 Sulfatases signature 2. 111 121 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB5295 c0b804b3cb313a1c0bbc89615896bc6c 493 Gene3D G3DSA:3.40.720.10 20 332 1.5E-87 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12343 27600742f204cf4b4d29f4da0dbd2500 571 Gene3D G3DSA:3.20.20.80 210 484 9.8E-96 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB12343 27600742f204cf4b4d29f4da0dbd2500 571 Gene3D G3DSA:3.20.20.80 48 135 9.8E-96 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB12343 27600742f204cf4b4d29f4da0dbd2500 571 PIRSF PIRSF003059 6 567 1.5E-212 T 11-11-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 RB12343 27600742f204cf4b4d29f4da0dbd2500 571 SUPERFAMILY SSF51445 45 358 3.19E-80 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB12343 27600742f204cf4b4d29f4da0dbd2500 571 SUPERFAMILY SSF51445 420 521 3.19E-80 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB12343 27600742f204cf4b4d29f4da0dbd2500 571 Gene3D G3DSA:3.90.400.10 136 203 7.4E-21 T 11-11-2016 RB12343 27600742f204cf4b4d29f4da0dbd2500 571 Gene3D G3DSA:2.60.40.1180 495 566 9.3E-12 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta RB12343 27600742f204cf4b4d29f4da0dbd2500 571 SUPERFAMILY SSF51011 497 566 1.2E-6 T 11-11-2016 RB12343 27600742f204cf4b4d29f4da0dbd2500 571 Pfam PF11941 Domain of unknown function (DUF3459) 475 564 4.9E-5 T 11-11-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) RB12343 27600742f204cf4b4d29f4da0dbd2500 571 SMART SM00642 49 395 2.5E-5 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB12343 27600742f204cf4b4d29f4da0dbd2500 571 Pfam PF00128 Alpha amylase, catalytic domain 85 239 1.2E-17 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB3491 6d4c400ef2cc0ee3686696c5a49f248d 135 SUPERFAMILY SSF102546 1 135 4.19E-41 T 11-11-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RB3491 6d4c400ef2cc0ee3686696c5a49f248d 135 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 135 31.074 T 11-11-2016 IPR023064 D-ribose pyranase GO:0016872 RB3491 6d4c400ef2cc0ee3686696c5a49f248d 135 Pfam PF05025 RbsD / FucU transport protein family 1 134 7.5E-47 T 11-11-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RB3491 6d4c400ef2cc0ee3686696c5a49f248d 135 Gene3D G3DSA:3.40.1650.10 1 135 1.6E-35 T 11-11-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RB6127 de319f63636711bcdf552c187ee62825 1499 Gene3D G3DSA:3.40.50.410 79 256 2.3E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6127 de319f63636711bcdf552c187ee62825 1499 Gene3D G3DSA:1.25.40.10 969 993 5.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6127 de319f63636711bcdf552c187ee62825 1499 Gene3D G3DSA:1.25.40.10 665 680 5.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6127 de319f63636711bcdf552c187ee62825 1499 Gene3D G3DSA:1.25.40.10 1030 1140 5.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6127 de319f63636711bcdf552c187ee62825 1499 Gene3D G3DSA:1.25.40.10 369 407 5.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6127 de319f63636711bcdf552c187ee62825 1499 Pfam PF13768 von Willebrand factor type A domain 81 238 2.1E-19 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6127 de319f63636711bcdf552c187ee62825 1499 SMART SM00327 79 256 3.4E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB6127 de319f63636711bcdf552c187ee62825 1499 SUPERFAMILY SSF53300 81 242 3.71E-14 T 11-11-2016 IPR002035 von Willebrand factor, type A RB451 24a85abe1a5e582aceef81d5721bf747 67 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 12 58 8.1E-9 T 11-11-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RB451 24a85abe1a5e582aceef81d5721bf747 67 Gene3D G3DSA:1.10.1660.10 7 56 3.1E-10 T 11-11-2016 RB451 24a85abe1a5e582aceef81d5721bf747 67 Pfam PF12728 Helix-turn-helix domain 9 59 4.4E-12 T 11-11-2016 RB451 24a85abe1a5e582aceef81d5721bf747 67 SUPERFAMILY SSF46955 9 60 5.95E-13 T 11-11-2016 IPR009061 Putative DNA-binding domain RB9141 487c24025e84984d8eea616dfc85bb91 346 SUPERFAMILY SSF53335 170 313 6.66E-26 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9141 487c24025e84984d8eea616dfc85bb91 346 Gene3D G3DSA:3.40.50.150 179 314 1.1E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9141 487c24025e84984d8eea616dfc85bb91 346 Pfam PF05175 Methyltransferase small domain 179 319 6.2E-23 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 RB5143 8c3c47e392f9e8ecbfe41b9846ad1e49 479 Gene3D G3DSA:2.120.10.10 150 465 1.2E-46 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB5143 8c3c47e392f9e8ecbfe41b9846ad1e49 479 SUPERFAMILY SSF50939 148 457 1.01E-49 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB5143 8c3c47e392f9e8ecbfe41b9846ad1e49 479 Pfam PF13088 BNR repeat-like domain 162 435 3.8E-28 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB11946 d98c9fa9d1be3050dde764879e6d81d9 201 SUPERFAMILY SSF55469 6 194 5.5E-42 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RB11946 d98c9fa9d1be3050dde764879e6d81d9 201 Pfam PF00881 Nitroreductase family 14 158 4.7E-20 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 RB11946 d98c9fa9d1be3050dde764879e6d81d9 201 Gene3D G3DSA:3.40.109.10 5 196 3.6E-45 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RB11033 ce4260b1052bbae389ae00772166afa0 970 Pfam PF02687 FtsX-like permease family 341 454 2.4E-13 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB11033 ce4260b1052bbae389ae00772166afa0 970 Pfam PF02687 FtsX-like permease family 839 958 3.1E-20 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB11033 ce4260b1052bbae389ae00772166afa0 970 Pfam PF12704 MacB-like periplasmic core domain 556 787 2.0E-6 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB11033 ce4260b1052bbae389ae00772166afa0 970 Pfam PF12704 MacB-like periplasmic core domain 24 206 3.9E-10 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB2056 53c99b284a87632c8f36f3c303fcacf5 198 Pfam PF07811 TadE-like protein 18 60 1.1E-8 T 11-11-2016 IPR012495 TadE-like RB4579 91c764cd1a8c6c9fb299dcd95cc91954 194 SUPERFAMILY SSF55486 33 160 2.93E-31 T 11-11-2016 RB4579 91c764cd1a8c6c9fb299dcd95cc91954 194 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 54 157 2.1E-29 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RB4579 91c764cd1a8c6c9fb299dcd95cc91954 194 Gene3D G3DSA:3.40.390.30 32 164 1.3E-30 T 11-11-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RB4579 91c764cd1a8c6c9fb299dcd95cc91954 194 Pfam PF02130 Uncharacterized protein family UPF0054 36 154 7.6E-25 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RB4579 91c764cd1a8c6c9fb299dcd95cc91954 194 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 127 137 - T 11-11-2016 IPR020549 Endoribonuclease YbeY, conserved site RB4579 91c764cd1a8c6c9fb299dcd95cc91954 194 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 10 165 18.322 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RB4960 3a47d0794e8d71b062fd6e587fdb98c9 369 Pfam PF16199 Radical_SAM C-terminal domain 240 321 1.2E-19 T 11-11-2016 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 RB4960 3a47d0794e8d71b062fd6e587fdb98c9 369 SMART SM00729 49 278 9.3E-30 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB4960 3a47d0794e8d71b062fd6e587fdb98c9 369 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 32 332 1.7E-97 T 11-11-2016 IPR005911 Protein YhcC-like GO:0051536 RB4960 3a47d0794e8d71b062fd6e587fdb98c9 369 SUPERFAMILY SSF102114 40 285 5.1E-43 T 11-11-2016 RB4960 3a47d0794e8d71b062fd6e587fdb98c9 369 Pfam PF04055 Radical SAM superfamily 69 230 7.8E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB4960 3a47d0794e8d71b062fd6e587fdb98c9 369 Gene3D G3DSA:3.80.30.20 50 280 2.0E-27 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB5546 f05e4e3fd68b6c7e7cb5e847cf0162b4 530 SUPERFAMILY SSF53756 6 359 2.67E-17 T 11-11-2016 RB4467 3739dd5584ca900e9e1c8d477da9a37d 366 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 272 313 - T 11-11-2016 IPR000952 AB hydrolase 4, conserved site RB4467 3739dd5584ca900e9e1c8d477da9a37d 366 SUPERFAMILY SSF53474 90 348 1.39E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4467 3739dd5584ca900e9e1c8d477da9a37d 366 PIRSF PIRSF005211 25 366 6.7E-67 T 11-11-2016 IPR012020 AB hydrolase 4 family RB4467 3739dd5584ca900e9e1c8d477da9a37d 366 Pfam PF12146 Serine aminopeptidase, S33 105 319 1.7E-18 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 RB4467 3739dd5584ca900e9e1c8d477da9a37d 366 Gene3D G3DSA:3.40.50.1820 91 364 7.1E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10898 e48c572c40df6bd57abbd18a6f70df31 366 Gene3D G3DSA:3.40.50.2300 208 356 2.4E-31 T 11-11-2016 RB10898 e48c572c40df6bd57abbd18a6f70df31 366 SUPERFAMILY SSF53822 47 184 8.08E-21 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB10898 e48c572c40df6bd57abbd18a6f70df31 366 Gene3D G3DSA:3.40.50.2300 54 160 6.0E-24 T 11-11-2016 RB10898 e48c572c40df6bd57abbd18a6f70df31 366 Pfam PF13407 Periplasmic binding protein domain 52 157 3.4E-12 T 11-11-2016 IPR025997 Periplasmic binding protein RB10898 e48c572c40df6bd57abbd18a6f70df31 366 Pfam PF13407 Periplasmic binding protein domain 218 358 9.9E-32 T 11-11-2016 IPR025997 Periplasmic binding protein RB10898 e48c572c40df6bd57abbd18a6f70df31 366 SUPERFAMILY SSF53822 217 357 3.62E-27 T 11-11-2016 IPR028082 Periplasmic binding protein-like I RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 SUPERFAMILY SSF52540 697 1000 6.76E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 48 1016 1.1E-279 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:3.30.1490.20 251 290 1.9E-5 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:3.40.50.300 912 1030 6.2E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:3.40.50.300 696 758 6.2E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:3.40.50.300 560 680 2.7E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:3.40.50.300 40 95 2.7E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 SMART SM00382 67 646 0.04 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 SMART SM00382 715 999 7.9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:1.10.8.280 351 453 2.8E-18 T 11-11-2016 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 SUPERFAMILY SSF52540 515 651 2.41E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 SUPERFAMILY SSF52540 48 250 2.41E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:1.20.1580.10 785 911 1.2E-45 T 11-11-2016 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Pfam PF00005 ABC transporter 706 951 5.1E-8 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:1.20.1580.10 136 173 1.1E-42 T 11-11-2016 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:1.20.1580.10 315 348 1.1E-42 T 11-11-2016 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:1.20.1580.10 529 559 1.1E-42 T 11-11-2016 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 Gene3D G3DSA:1.20.1580.10 454 493 1.1E-42 T 11-11-2016 RB5606 ef2bc3fef4eebb99dbbe13ce43b35625 1031 ProSitePatterns PS00211 ABC transporters family signature. 921 935 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB10010 4857eaa3687ddc63a5f6106af0975d6d 840 Pfam PF07626 Protein of unknown function (DUF1587) 127 193 1.5E-23 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB10010 4857eaa3687ddc63a5f6106af0975d6d 840 Pfam PF07635 Planctomycete cytochrome C 43 90 6.8E-5 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB10010 4857eaa3687ddc63a5f6106af0975d6d 840 Pfam PF07624 Protein of unknown function (DUF1585) 766 838 1.6E-22 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB10010 4857eaa3687ddc63a5f6106af0975d6d 840 Pfam PF07637 Protein of unknown function (DUF1595) 428 486 7.2E-21 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB10010 4857eaa3687ddc63a5f6106af0975d6d 840 Pfam PF07631 Protein of unknown function (DUF1592) 496 624 4.1E-41 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB10010 4857eaa3687ddc63a5f6106af0975d6d 840 Pfam PF07627 Protein of unknown function (DUF1588) 652 747 1.1E-30 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB1205 4a86cac862543097af891130a9709d77 456 SUPERFAMILY SSF53649 30 448 1.6E-98 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB1205 4a86cac862543097af891130a9709d77 456 Gene3D G3DSA:3.40.720.10 30 224 9.4E-88 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1205 4a86cac862543097af891130a9709d77 456 Gene3D G3DSA:3.40.720.10 262 398 9.4E-88 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1205 4a86cac862543097af891130a9709d77 456 Gene3D G3DSA:3.30.1120.10 399 447 1.1E-14 T 11-11-2016 RB1205 4a86cac862543097af891130a9709d77 456 Pfam PF00884 Sulfatase 32 363 5.0E-44 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3032 d74324b65e636ed3b87f278b8d53ed32 477 Pfam PF07690 Major Facilitator Superfamily 80 439 6.1E-22 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB3032 d74324b65e636ed3b87f278b8d53ed32 477 SUPERFAMILY SSF103473 35 473 1.03E-42 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB3032 d74324b65e636ed3b87f278b8d53ed32 477 Gene3D G3DSA:1.20.1250.20 295 471 1.6E-14 T 11-11-2016 RB3032 d74324b65e636ed3b87f278b8d53ed32 477 Gene3D G3DSA:1.20.1250.20 78 264 9.9E-17 T 11-11-2016 RB1862 250fecffd5831e3b5260ce5eee475082 135 SMART SM00345 17 76 5.4E-16 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RB1862 250fecffd5831e3b5260ce5eee475082 135 SUPERFAMILY SSF46785 6 86 6.63E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1862 250fecffd5831e3b5260ce5eee475082 135 Gene3D G3DSA:1.10.10.10 4 77 5.9E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1862 250fecffd5831e3b5260ce5eee475082 135 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 4.7E-16 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RB12039 526efa1d39873b056a1dd14df3f2fa91 481 Pfam PF01565 FAD binding domain 40 178 4.1E-42 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RB12039 526efa1d39873b056a1dd14df3f2fa91 481 Gene3D G3DSA:3.30.465.10 95 215 2.1E-32 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RB12039 526efa1d39873b056a1dd14df3f2fa91 481 Pfam PF02913 FAD linked oxidases, C-terminal domain 215 454 9.4E-57 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RB12039 526efa1d39873b056a1dd14df3f2fa91 481 SUPERFAMILY SSF55103 218 458 1.8E-61 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RB12039 526efa1d39873b056a1dd14df3f2fa91 481 Gene3D G3DSA:3.30.43.10 4 94 1.4E-24 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RB12039 526efa1d39873b056a1dd14df3f2fa91 481 SUPERFAMILY SSF56176 5 215 2.71E-66 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RB7616 e4b2887b35e24ddb9f0f2888d2e29107 221 Gene3D G3DSA:3.40.50.10420 56 220 1.4E-34 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RB7616 e4b2887b35e24ddb9f0f2888d2e29107 221 SUPERFAMILY SSF100950 55 220 5.44E-33 T 11-11-2016 RB7616 e4b2887b35e24ddb9f0f2888d2e29107 221 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 124 220 9.0E-11 T 11-11-2016 IPR003741 LUD domain RB10503 6965d5fe5fedad84be85b0b56315555a 457 SUPERFAMILY SSF55347 211 391 5.01E-22 T 11-11-2016 RB10503 6965d5fe5fedad84be85b0b56315555a 457 Gene3D G3DSA:3.40.50.720 62 215 7.2E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10503 6965d5fe5fedad84be85b0b56315555a 457 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 67 191 3.0E-11 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB10503 6965d5fe5fedad84be85b0b56315555a 457 Gene3D G3DSA:3.30.360.10 216 422 1.6E-33 T 11-11-2016 RB10503 6965d5fe5fedad84be85b0b56315555a 457 SUPERFAMILY SSF51735 59 234 1.82E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB546 44a38ec8de57d37bb8262e93abbf7417 485 Gene3D G3DSA:3.40.720.10 353 461 1.6E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB546 44a38ec8de57d37bb8262e93abbf7417 485 SUPERFAMILY SSF53649 305 461 1.4E-19 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB546 44a38ec8de57d37bb8262e93abbf7417 485 Pfam PF07394 Protein of unknown function (DUF1501) 60 484 6.8E-147 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB11286 bc7106d75de26c1c14c86c3820e84c06 131 PIRSF PIRSF005859 1 131 7.3E-34 T 11-11-2016 IPR004307 TspO/MBR-related protein GO:0016021 RB11286 bc7106d75de26c1c14c86c3820e84c06 131 Pfam PF03073 TspO/MBR family 5 127 1.9E-25 T 11-11-2016 IPR004307 TspO/MBR-related protein GO:0016021 RB110 c1b8a0ab8821fa25ea81de3cc61f82de 582 Pfam PF00884 Sulfatase 28 388 1.4E-53 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB110 c1b8a0ab8821fa25ea81de3cc61f82de 582 Gene3D G3DSA:3.40.720.10 25 405 5.1E-98 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB110 c1b8a0ab8821fa25ea81de3cc61f82de 582 SUPERFAMILY SSF53649 26 487 5.23E-116 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB110 c1b8a0ab8821fa25ea81de3cc61f82de 582 Pfam PF16347 Domain of unknown function (DUF4976) 391 485 5.8E-7 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB110 c1b8a0ab8821fa25ea81de3cc61f82de 582 Gene3D G3DSA:3.30.1120.10 421 486 2.2E-7 T 11-11-2016 RB6133 b90634a34a6999f973d9887e3fc5ab08 406 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 24 392 1.6E-111 T 11-11-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RB6133 b90634a34a6999f973d9887e3fc5ab08 406 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 24 387 41.88 T 11-11-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RB6133 b90634a34a6999f973d9887e3fc5ab08 406 SUPERFAMILY SSF51246 328 401 2.12E-14 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB6133 b90634a34a6999f973d9887e3fc5ab08 406 Gene3D G3DSA:3.40.50.20 16 120 2.0E-31 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB6133 b90634a34a6999f973d9887e3fc5ab08 406 SUPERFAMILY SSF52440 19 116 2.59E-25 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB6133 b90634a34a6999f973d9887e3fc5ab08 406 SUPERFAMILY SSF56059 120 323 2.3E-64 T 11-11-2016 RB6133 b90634a34a6999f973d9887e3fc5ab08 406 Pfam PF02222 ATP-grasp domain 129 303 2.6E-48 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RB6133 b90634a34a6999f973d9887e3fc5ab08 406 Gene3D G3DSA:3.30.1490.20 121 169 9.1E-5 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB6133 b90634a34a6999f973d9887e3fc5ab08 406 Gene3D G3DSA:3.30.470.20 170 401 4.2E-85 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB4961 654f9eaf6688968660891334a375d723 246 Pfam PF14229 Domain of unknown function (DUF4332) 106 230 2.7E-30 T 11-11-2016 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 RB5328 a39882ccb130b41aecf38ead868874ee 485 SUPERFAMILY SSF53649 303 459 2.26E-22 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5328 a39882ccb130b41aecf38ead868874ee 485 Gene3D G3DSA:3.40.720.10 343 472 2.3E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5328 a39882ccb130b41aecf38ead868874ee 485 Pfam PF07394 Protein of unknown function (DUF1501) 66 482 3.6E-162 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB7500 3e2880a0c4605af72ee54d8ed9777db8 347 Gene3D G3DSA:3.40.50.300 42 209 1.1E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7500 3e2880a0c4605af72ee54d8ed9777db8 347 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 60 193 8.7E-64 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB7500 3e2880a0c4605af72ee54d8ed9777db8 347 Gene3D G3DSA:1.10.8.300 224 340 2.0E-31 T 11-11-2016 RB7500 3e2880a0c4605af72ee54d8ed9777db8 347 PIRSF PIRSF002849 3 345 6.5E-123 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB7500 3e2880a0c4605af72ee54d8ed9777db8 347 SMART SM00382 57 201 7.1E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7500 3e2880a0c4605af72ee54d8ed9777db8 347 SUPERFAMILY SSF52540 29 315 1.23E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10270 a941a105bd7d2c701959fff87b3e4e82 537 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 27 523 1.0E-180 T 11-11-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 RB10270 a941a105bd7d2c701959fff87b3e4e82 537 SUPERFAMILY SSF51905 22 340 7.9E-62 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10270 a941a105bd7d2c701959fff87b3e4e82 537 SUPERFAMILY SSF51905 471 513 7.9E-62 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10270 a941a105bd7d2c701959fff87b3e4e82 537 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 481 501 - T 11-11-2016 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site RB10270 a941a105bd7d2c701959fff87b3e4e82 537 Gene3D G3DSA:3.50.50.60 22 116 9.7E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10270 a941a105bd7d2c701959fff87b3e4e82 537 Gene3D G3DSA:3.50.50.60 223 363 9.7E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10270 a941a105bd7d2c701959fff87b3e4e82 537 PRINTS PR00419 Adrenodoxin reductase family signature 49 62 2.1E-6 T 11-11-2016 RB10270 a941a105bd7d2c701959fff87b3e4e82 537 PRINTS PR00419 Adrenodoxin reductase family signature 26 48 2.1E-6 T 11-11-2016 RB10270 a941a105bd7d2c701959fff87b3e4e82 537 Pfam PF01593 Flavin containing amine oxidoreductase 35 506 9.6E-25 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB8725 15e67bce96f20b7d5cd569b99ad96d5d 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 4 53 2.4E-11 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8725 15e67bce96f20b7d5cd569b99ad96d5d 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 4 53 12.005 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8725 15e67bce96f20b7d5cd569b99ad96d5d 54 Pfam PF00471 Ribosomal protein L33 10 53 3.5E-14 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB8725 15e67bce96f20b7d5cd569b99ad96d5d 54 SUPERFAMILY SSF57829 3 53 4.64E-13 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RB8157 b0de9d00761e3e9b8b0f935f92a14c37 364 SUPERFAMILY SSF52540 12 158 1.06E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8157 b0de9d00761e3e9b8b0f935f92a14c37 364 Gene3D G3DSA:3.40.50.300 6 159 6.0E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8157 b0de9d00761e3e9b8b0f935f92a14c37 364 Pfam PF07728 AAA domain (dynein-related subfamily) 22 151 5.3E-8 T 11-11-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RB362 df81441e4d8b05be444232f61d2d1e96 312 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 25 244 1.8E-11 T 11-11-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RB362 df81441e4d8b05be444232f61d2d1e96 312 Gene3D G3DSA:3.60.21.10 212 259 9.6E-28 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB362 df81441e4d8b05be444232f61d2d1e96 312 Gene3D G3DSA:3.60.21.10 24 157 9.6E-28 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB362 df81441e4d8b05be444232f61d2d1e96 312 SUPERFAMILY SSF56300 202 266 6.99E-30 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB362 df81441e4d8b05be444232f61d2d1e96 312 SUPERFAMILY SSF56300 23 146 6.99E-30 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB11211 eef85f3c6a1140a4245bb5561ea7f0fe 180 SUPERFAMILY SSF55729 4 147 3.06E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB11211 eef85f3c6a1140a4245bb5561ea7f0fe 180 Pfam PF13527 Acetyltransferase (GNAT) domain 12 131 1.8E-14 T 11-11-2016 RB11211 eef85f3c6a1140a4245bb5561ea7f0fe 180 Gene3D G3DSA:3.40.630.30 12 133 1.7E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB12866 19842ebb53eeec46d54870ae2560ca68 373 Pfam PF06167 Glucose-regulated metallo-peptidase M90 92 326 2.9E-63 T 11-11-2016 IPR010384 MtfA family RB12866 19842ebb53eeec46d54870ae2560ca68 373 SUPERFAMILY SSF103642 343 364 1.8E-7 T 11-11-2016 RB12866 19842ebb53eeec46d54870ae2560ca68 373 Pfam PF02810 SEC-C motif 345 362 4.4E-9 T 11-11-2016 IPR004027 SEC-C motif RB12866 19842ebb53eeec46d54870ae2560ca68 373 SUPERFAMILY SSF55486 136 328 1.03E-45 T 11-11-2016 RB12866 19842ebb53eeec46d54870ae2560ca68 373 Gene3D G3DSA:3.40.390.10 116 327 2.5E-47 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB9650 39e92f999331712f27a16596de797c11 470 Gene3D G3DSA:3.30.1120.10 386 467 1.4E-19 T 11-11-2016 RB9650 39e92f999331712f27a16596de797c11 470 Pfam PF00884 Sulfatase 47 363 2.8E-76 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9650 39e92f999331712f27a16596de797c11 470 Gene3D G3DSA:3.40.720.10 44 384 4.1E-114 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9650 39e92f999331712f27a16596de797c11 470 Pfam PF16347 Domain of unknown function (DUF4976) 369 457 4.1E-10 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB9650 39e92f999331712f27a16596de797c11 470 SUPERFAMILY SSF53649 45 463 1.45E-130 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 SUPERFAMILY SSF51419 21 280 2.29E-57 T 11-11-2016 IPR029066 PLP-binding barrel RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 Gene3D G3DSA:2.40.37.10 273 409 3.4E-40 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 Gene3D G3DSA:3.20.20.10 30 272 3.2E-62 T 11-11-2016 IPR029066 PLP-binding barrel RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 53 71 3.7E-11 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 3.7E-11 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 73 85 3.7E-11 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 3.7E-11 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 219 232 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 32 279 1.8E-31 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 PRINTS PR01181 Diaminopimelate decarboxylase signature 71 88 1.1E-7 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 1.1E-7 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 PRINTS PR01181 Diaminopimelate decarboxylase signature 296 314 1.1E-7 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 284 387 7.2E-12 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 RB9188 e70d0a5f872ee14bd85f5666e97ed1b3 427 SUPERFAMILY SSF50621 255 408 4.6E-42 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RB12209 9316273b325a28dd48f07a8dc491e378 110 Gene3D G3DSA:1.10.10.10 27 85 3.2E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB12209 9316273b325a28dd48f07a8dc491e378 110 SUPERFAMILY SSF46785 27 92 7.67E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB12209 9316273b325a28dd48f07a8dc491e378 110 Pfam PF13730 Helix-turn-helix domain 29 81 2.2E-7 T 11-11-2016 RB7863 82ced3fe3c2b646ab26c5cd2ab05f0bf 164 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 11-11-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7863 82ced3fe3c2b646ab26c5cd2ab05f0bf 164 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 144 1.3E-47 T 11-11-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB7863 82ced3fe3c2b646ab26c5cd2ab05f0bf 164 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 147 19.842 T 11-11-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RB7863 82ced3fe3c2b646ab26c5cd2ab05f0bf 164 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 145 2.0E-35 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P RB7863 82ced3fe3c2b646ab26c5cd2ab05f0bf 164 Gene3D G3DSA:3.100.10.10 32 150 1.5E-37 T 11-11-2016 RB7863 82ced3fe3c2b646ab26c5cd2ab05f0bf 164 SUPERFAMILY SSF52080 6 144 3.79E-43 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P RB133 84fddfe442c2d2b412eef9d7a4c14584 283 Pfam PF04228 Putative neutral zinc metallopeptidase 1 278 6.8E-112 T 11-11-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RB7381 10c22800c4dd3fab6bad9df4fe76f5bc 243 Pfam PF11736 Protein of unknown function (DUF3299) 149 225 2.0E-5 T 11-11-2016 IPR021727 Protein of unknown function DUF3299 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PIRSF PIRSF006615 31 533 1.1E-201 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 46 527 1.5E-107 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 365 384 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 434 455 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 277 296 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 180 200 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 260 276 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 479 497 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 411 428 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 297 316 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 324 340 2.2E-63 T 11-11-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 RB1579 6a4d6c165087579d1d0e62325e7e51fe 534 SUPERFAMILY SSF55486 34 527 1.47E-103 T 11-11-2016 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 SUPERFAMILY SSF47917 382 503 8.04E-34 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 510 39.983 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 TIGRFAM TIGR03324 alt_F1F0_F1_al: alternate F1F0 ATPase, F1 subunit alpha 11 505 3.1E-274 T 11-11-2016 IPR017710 Alternate F1F0 ATPase, F1 subunit alpha GO:0015986|GO:0016820|GO:0045261 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 Gene3D G3DSA:1.20.150.20 382 502 4.3E-34 T 11-11-2016 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 Gene3D G3DSA:2.40.30.20 17 100 4.7E-23 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 502 6.9E-36 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 18 498 1.4E-183 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 Gene3D G3DSA:3.40.50.300 104 379 2.9E-97 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 SUPERFAMILY SSF50615 22 102 3.14E-20 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 35 99 3.4E-8 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 158 373 1.7E-65 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB4916 d326bcca18ca3c0be78a15e5fd2a58d6 510 SUPERFAMILY SSF52540 105 378 9.31E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7903 c79350ca8f421f8c3244224ed19b223b 408 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7903 c79350ca8f421f8c3244224ed19b223b 408 SUPERFAMILY SSF52540 28 270 5.8E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7903 c79350ca8f421f8c3244224ed19b223b 408 Pfam PF00005 ABC transporter 44 190 7.3E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB7903 c79350ca8f421f8c3244224ed19b223b 408 Gene3D G3DSA:3.40.50.300 23 259 1.8E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7903 c79350ca8f421f8c3244224ed19b223b 408 SMART SM00382 52 240 1.3E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB2690 fe4fd3fdf11d1f4b6226292517d8ed69 506 Gene3D G3DSA:3.40.720.10 378 480 1.3E-5 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2690 fe4fd3fdf11d1f4b6226292517d8ed69 506 SUPERFAMILY SSF53649 327 490 3.17E-17 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2690 fe4fd3fdf11d1f4b6226292517d8ed69 506 Pfam PF07394 Protein of unknown function (DUF1501) 81 505 3.9E-148 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB9239 bea4610ba3677b72ff1792cfa36c49ba 231 Pfam PF05050 Methyltransferase FkbM domain 34 207 8.8E-17 T 11-11-2016 IPR006342 Methyltransferase FkbM RB9239 bea4610ba3677b72ff1792cfa36c49ba 231 Gene3D G3DSA:3.40.50.150 21 215 6.1E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9239 bea4610ba3677b72ff1792cfa36c49ba 231 SUPERFAMILY SSF53335 28 208 1.66E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9239 bea4610ba3677b72ff1792cfa36c49ba 231 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 32 183 4.2E-14 T 11-11-2016 IPR006342 Methyltransferase FkbM RB7625 aee50e7e4e6c3b3a7066bb22a067b2e3 651 Pfam PF02447 GntP family permease 453 644 1.4E-37 T 11-11-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RB7625 aee50e7e4e6c3b3a7066bb22a067b2e3 651 Pfam PF02447 GntP family permease 71 329 2.4E-51 T 11-11-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RB2038 a42992de085971dd09345879419c5120 1553 Pfam PF14229 Domain of unknown function (DUF4332) 1423 1546 1.3E-31 T 11-11-2016 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 RB2038 a42992de085971dd09345879419c5120 1553 Pfam PF14229 Domain of unknown function (DUF4332) 1062 1180 1.0E-13 T 11-11-2016 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 RB2038 a42992de085971dd09345879419c5120 1553 Gene3D G3DSA:3.40.50.300 2 264 6.2E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2038 a42992de085971dd09345879419c5120 1553 Gene3D G3DSA:3.40.50.300 549 572 6.2E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2038 a42992de085971dd09345879419c5120 1553 Gene3D G3DSA:1.10.150.20 1418 1458 9.6E-7 T 11-11-2016 RB2038 a42992de085971dd09345879419c5120 1553 SUPERFAMILY SSF52540 196 341 1.4E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2038 a42992de085971dd09345879419c5120 1553 SUPERFAMILY SSF52540 1 97 1.4E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB426 608eb33fc20d47af44d6be172d7bbb7b 1201 Pfam PF07583 Protein of unknown function (DUF1549) 159 367 1.8E-80 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB426 608eb33fc20d47af44d6be172d7bbb7b 1201 SUPERFAMILY SSF46626 20 128 3.26E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB426 608eb33fc20d47af44d6be172d7bbb7b 1201 Pfam PF07587 Protein of unknown function (DUF1553) 890 1154 2.5E-90 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB426 608eb33fc20d47af44d6be172d7bbb7b 1201 Pfam PF07635 Planctomycete cytochrome C 54 108 4.7E-15 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB426 608eb33fc20d47af44d6be172d7bbb7b 1201 Gene3D G3DSA:1.10.760.10 14 126 3.1E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB12524 fd6676f6f52c88be7fe08a798a3d431b 210 SUPERFAMILY SSF75620 42 109 1.06E-6 T 11-11-2016 RB12524 fd6676f6f52c88be7fe08a798a3d431b 210 Gene3D G3DSA:3.30.160.20 42 110 4.8E-9 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain RB12524 fd6676f6f52c88be7fe08a798a3d431b 210 Pfam PF00472 RF-1 domain 42 111 3.1E-9 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RB12002 45a48d7d66c82d8351bb1cb7a7ef5166 268 Pfam PF04029 2-phosphosulpholactate phosphatase 8 258 4.4E-65 T 11-11-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RB12002 45a48d7d66c82d8351bb1cb7a7ef5166 268 SUPERFAMILY SSF142823 1 259 5.49E-54 T 11-11-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RB12002 45a48d7d66c82d8351bb1cb7a7ef5166 268 Gene3D G3DSA:3.90.1560.10 16 260 1.0E-66 T 11-11-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RB2571 862c1c5017b8400f0e7cd5582e54d477 101 Gene3D G3DSA:2.40.50.220 2 100 4.3E-25 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB2571 862c1c5017b8400f0e7cd5582e54d477 101 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 2 94 1.0E-21 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB2571 862c1c5017b8400f0e7cd5582e54d477 101 SUPERFAMILY SSF159133 2 99 1.24E-21 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB2571 862c1c5017b8400f0e7cd5582e54d477 101 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 17 95 4.0E-41 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB977 427a2777378c1a96749384cae46d7e6f 1189 Gene3D G3DSA:2.30.40.10 1010 1102 1.5E-22 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB977 427a2777378c1a96749384cae46d7e6f 1189 SUPERFAMILY SSF51556 780 1068 3.54E-27 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB977 427a2777378c1a96749384cae46d7e6f 1189 SUPERFAMILY SSF51556 211 427 2.89E-6 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB977 427a2777378c1a96749384cae46d7e6f 1189 Gene3D G3DSA:2.30.40.10 716 831 1.2E-20 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB977 427a2777378c1a96749384cae46d7e6f 1189 Gene3D G3DSA:2.30.40.10 53 138 2.1E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB977 427a2777378c1a96749384cae46d7e6f 1189 SUPERFAMILY SSF51338 717 781 6.72E-23 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB977 427a2777378c1a96749384cae46d7e6f 1189 SUPERFAMILY SSF51338 1067 1102 6.72E-23 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB977 427a2777378c1a96749384cae46d7e6f 1189 Gene3D G3DSA:2.30.40.10 367 466 3.2E-13 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB977 427a2777378c1a96749384cae46d7e6f 1189 Pfam PF01979 Amidohydrolase family 1010 1098 7.0E-16 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB977 427a2777378c1a96749384cae46d7e6f 1189 SUPERFAMILY SSF51338 48 124 1.92E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB977 427a2777378c1a96749384cae46d7e6f 1189 SUPERFAMILY SSF51338 427 461 1.92E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB977 427a2777378c1a96749384cae46d7e6f 1189 Pfam PF07969 Amidohydrolase family 301 460 1.7E-10 T 11-11-2016 IPR013108 Amidohydrolase 3 RB2231 479532a0c275fe7e99e7b8d564108f5f 498 Pfam PF07394 Protein of unknown function (DUF1501) 70 496 3.5E-119 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB2231 479532a0c275fe7e99e7b8d564108f5f 498 SUPERFAMILY SSF53649 311 475 2.06E-14 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB13091 0cd22f9e868505aa510d4c9503dd46e1 431 SMART SM00833 266 386 4.2E-48 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RB13091 0cd22f9e868505aa510d4c9503dd46e1 431 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 220 2.8E-57 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RB13091 0cd22f9e868505aa510d4c9503dd46e1 431 Gene3D G3DSA:3.40.50.300 12 238 4.4E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13091 0cd22f9e868505aa510d4c9503dd46e1 431 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 266 386 3.2E-28 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RB13091 0cd22f9e868505aa510d4c9503dd46e1 431 Gene3D G3DSA:3.30.1220.10 256 386 8.1E-15 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RB13091 0cd22f9e868505aa510d4c9503dd46e1 431 SUPERFAMILY SSF52540 9 323 5.84E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3109 314fafefa3964a3f978bf694503c26d5 411 Pfam PF03150 Di-haem cytochrome c peroxidase 71 214 3.1E-43 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RB3109 314fafefa3964a3f978bf694503c26d5 411 SUPERFAMILY SSF46626 195 264 5.07E-26 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3109 314fafefa3964a3f978bf694503c26d5 411 SUPERFAMILY SSF46626 307 381 5.07E-26 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3109 314fafefa3964a3f978bf694503c26d5 411 Gene3D G3DSA:1.10.760.10 60 200 6.9E-42 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3109 314fafefa3964a3f978bf694503c26d5 411 Gene3D G3DSA:1.10.760.10 201 383 4.5E-37 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3109 314fafefa3964a3f978bf694503c26d5 411 SUPERFAMILY SSF46626 53 206 2.42E-45 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6858 7ee29812db7edeb79c8319984888234c 341 Gene3D G3DSA:3.30.360.10 206 324 3.5E-5 T 11-11-2016 RB6858 7ee29812db7edeb79c8319984888234c 341 Gene3D G3DSA:3.40.50.720 26 190 1.5E-19 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6858 7ee29812db7edeb79c8319984888234c 341 SUPERFAMILY SSF51735 28 205 1.52E-21 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6858 7ee29812db7edeb79c8319984888234c 341 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 30 160 2.3E-10 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB5915 cb99b59a3136590180de7ef3bac29b29 110 SUPERFAMILY SSF54523 9 104 1.1E-10 T 11-11-2016 RB5915 cb99b59a3136590180de7ef3bac29b29 110 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 8.3E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5915 cb99b59a3136590180de7ef3bac29b29 110 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 27 4.4E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5915 cb99b59a3136590180de7ef3bac29b29 110 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.1E-6 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RB5915 cb99b59a3136590180de7ef3bac29b29 110 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.1E-6 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RB5915 cb99b59a3136590180de7ef3bac29b29 110 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11728 7aeb834050edeeae9e81f06d1e49fe53 295 Gene3D G3DSA:3.20.20.150 12 290 1.6E-84 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB11728 7aeb834050edeeae9e81f06d1e49fe53 295 Pfam PF01261 Xylose isomerase-like TIM barrel 36 230 1.1E-31 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB11728 7aeb834050edeeae9e81f06d1e49fe53 295 SUPERFAMILY SSF51658 14 272 3.8E-61 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB1470 74934ddbb7220718eb47da5d51a72dab 785 SUPERFAMILY SSF51126 341 429 2.93E-14 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB1470 74934ddbb7220718eb47da5d51a72dab 785 SUPERFAMILY SSF51126 482 533 2.93E-14 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB1470 74934ddbb7220718eb47da5d51a72dab 785 SUPERFAMILY SSF51126 573 633 2.93E-14 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB1470 74934ddbb7220718eb47da5d51a72dab 785 Pfam PF13229 Right handed beta helix region 483 628 7.9E-7 T 11-11-2016 RB1470 74934ddbb7220718eb47da5d51a72dab 785 Gene3D G3DSA:2.160.20.10 575 618 1.1E-10 T 11-11-2016 IPR012334 Pectin lyase fold RB1470 74934ddbb7220718eb47da5d51a72dab 785 Gene3D G3DSA:2.160.20.10 342 533 1.1E-10 T 11-11-2016 IPR012334 Pectin lyase fold RB5618 d0c79454722c4133774f154e8b1d4468 168 Pfam PF05154 TM2 domain 44 90 2.1E-14 T 11-11-2016 IPR007829 TM2 domain RB5618 d0c79454722c4133774f154e8b1d4468 168 Pfam PF05154 TM2 domain 108 155 3.9E-16 T 11-11-2016 IPR007829 TM2 domain RB1263 ac34d576285d8593a8773957f46e9f38 374 Gene3D G3DSA:3.20.20.70 39 282 1.1E-58 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB1263 ac34d576285d8593a8773957f46e9f38 374 Pfam PF01207 Dihydrouridine synthase (Dus) 43 354 5.7E-60 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RB1263 ac34d576285d8593a8773957f46e9f38 374 SUPERFAMILY SSF51395 39 354 8.14E-66 T 11-11-2016 RB1263 ac34d576285d8593a8773957f46e9f38 374 Gene3D G3DSA:1.10.1200.80 288 355 5.1E-9 T 11-11-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RB1263 ac34d576285d8593a8773957f46e9f38 374 PIRSF PIRSF006621 29 363 2.6E-67 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RB871 19421c03fa47477c19287a19d20ee80a 435 Gene3D G3DSA:1.25.40.10 365 392 2.5E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB871 19421c03fa47477c19287a19d20ee80a 435 Gene3D G3DSA:1.25.40.10 205 330 2.5E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB871 19421c03fa47477c19287a19d20ee80a 435 Gene3D G3DSA:1.25.40.10 38 188 4.9E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB871 19421c03fa47477c19287a19d20ee80a 435 Pfam PF13432 Tetratricopeptide repeat 215 267 0.0016 T 11-11-2016 RB871 19421c03fa47477c19287a19d20ee80a 435 SUPERFAMILY SSF48452 204 319 6.21E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB871 19421c03fa47477c19287a19d20ee80a 435 SUPERFAMILY SSF48452 56 173 6.21E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 Pfam PF00814 Glycoprotease family 31 332 7.2E-90 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 SUPERFAMILY SSF53067 108 333 4.86E-33 T 11-11-2016 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 11 334 5.2E-113 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 Gene3D G3DSA:3.30.420.40 9 167 3.8E-40 T 11-11-2016 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 SUPERFAMILY SSF53067 10 129 6.73E-28 T 11-11-2016 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 8 358 62.026 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 ProSitePatterns PS01016 Glycoprotease family signature. 103 123 - T 11-11-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 140 152 7.5E-45 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 11 24 7.5E-45 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 104 123 7.5E-45 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 83 103 7.5E-45 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 163 184 7.5E-45 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 289 298 7.5E-45 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB9084 62e0831dbeb109d881f25aa5ed3dc0e0 358 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 11 330 2.2E-95 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB7465 1606c721aa67651c3fb2726357ed8b76 623 SUPERFAMILY SSF55124 48 183 6.98E-28 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 Gene3D G3DSA:3.30.413.10 483 617 3.7E-32 T 11-11-2016 RB7465 1606c721aa67651c3fb2726357ed8b76 623 Gene3D G3DSA:3.30.413.10 184 385 2.5E-62 T 11-11-2016 RB7465 1606c721aa67651c3fb2726357ed8b76 623 PRINTS PR00397 Sirohaem Fe-binding site signature 481 499 3.2E-8 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 PRINTS PR00397 Sirohaem Fe-binding site signature 529 547 3.2E-8 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 Gene3D G3DSA:3.90.480.10 112 181 2.1E-48 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 Gene3D G3DSA:3.90.480.10 392 471 2.1E-48 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 115 174 7.4E-15 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 400 467 7.0E-12 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 SUPERFAMILY SSF55124 396 473 1.08E-16 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 529 545 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 SUPERFAMILY SSF56014 480 617 2.88E-33 T 11-11-2016 RB7465 1606c721aa67651c3fb2726357ed8b76 623 SUPERFAMILY SSF56014 184 393 5.89E-52 T 11-11-2016 RB7465 1606c721aa67651c3fb2726357ed8b76 623 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 213 378 1.4E-43 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB7465 1606c721aa67651c3fb2726357ed8b76 623 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 522 617 7.9E-7 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RB1052 866e0fa0867cf3a908aadc156ab379eb 391 Gene3D G3DSA:3.30.700.10 53 118 1.8E-7 T 11-11-2016 RB1052 866e0fa0867cf3a908aadc156ab379eb 391 SUPERFAMILY SSF54523 53 198 1.57E-21 T 11-11-2016 RB1052 866e0fa0867cf3a908aadc156ab379eb 391 Pfam PF13633 Prokaryotic N-terminal methylation site 52 76 1.2E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1052 866e0fa0867cf3a908aadc156ab379eb 391 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 52 72 2.2E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1052 866e0fa0867cf3a908aadc156ab379eb 391 Pfam PF07596 Protein of unknown function (DUF1559) 77 371 2.3E-65 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB10709 8e34c7575c0d6afb20f8d0e2b214a711 793 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 495 678 6.7E-12 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain RB10709 8e34c7575c0d6afb20f8d0e2b214a711 793 Gene3D G3DSA:3.10.105.10 559 686 1.2E-7 T 11-11-2016 RB10709 8e34c7575c0d6afb20f8d0e2b214a711 793 SUPERFAMILY SSF53850 311 780 2.53E-22 T 11-11-2016 RB10709 8e34c7575c0d6afb20f8d0e2b214a711 793 Gene3D G3DSA:3.40.190.10 484 558 8.9E-10 T 11-11-2016 RB11154 8063fa375ad3bcaa77c4713dbe164999 436 Pfam PF13437 HlyD family secretion protein 215 325 1.7E-11 T 11-11-2016 RB11154 8063fa375ad3bcaa77c4713dbe164999 436 SUPERFAMILY SSF111369 90 318 1.02E-18 T 11-11-2016 RB11154 8063fa375ad3bcaa77c4713dbe164999 436 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 73 409 1.9E-36 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB11154 8063fa375ad3bcaa77c4713dbe164999 436 Gene3D G3DSA:2.40.50.100 212 243 9.4E-11 T 11-11-2016 RB11154 8063fa375ad3bcaa77c4713dbe164999 436 Gene3D G3DSA:2.40.50.100 99 133 9.4E-11 T 11-11-2016 RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 Gene3D G3DSA:3.40.50.2300 2 137 1.1E-25 T 11-11-2016 RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 SMART SM00267 124 293 2.6E-36 T 11-11-2016 IPR000160 GGDEF domain RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 SUPERFAMILY SSF55073 140 294 7.61E-35 T 11-11-2016 IPR029787 Nucleotide cyclase RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 SUPERFAMILY SSF52172 3 120 3.42E-22 T 11-11-2016 IPR011006 CheY-like superfamily RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 287 1.3E-32 T 11-11-2016 IPR000160 GGDEF domain RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 Pfam PF00072 Response regulator receiver domain 5 114 8.3E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 SMART SM00448 3 117 3.4E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 290 1.3E-33 T 11-11-2016 IPR000160 GGDEF domain RB5465 bcf27d89f75953a9fbfd4400c37152e7 324 Gene3D G3DSA:3.30.70.270 138 294 4.6E-37 T 11-11-2016 RB9070 3c1535d09241babf97341d559fc74248 409 SUPERFAMILY SSF54523 11 160 1.1E-28 T 11-11-2016 RB9070 3c1535d09241babf97341d559fc74248 409 Pfam PF07596 Protein of unknown function (DUF1559) 35 365 1.2E-62 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB9070 3c1535d09241babf97341d559fc74248 409 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 4.4E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB9070 3c1535d09241babf97341d559fc74248 409 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB9070 3c1535d09241babf97341d559fc74248 409 Pfam PF13633 Prokaryotic N-terminal methylation site 9 34 1.7E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB9070 3c1535d09241babf97341d559fc74248 409 Gene3D G3DSA:3.30.700.10 11 72 1.0E-6 T 11-11-2016 RB5231 1f7c7443c2a9fe9004fd027eb7a3efe1 115 Pfam PF06108 Protein of unknown function (DUF952) 21 109 1.4E-30 T 11-11-2016 IPR009297 Protein of unknown function DUF952 RB5231 1f7c7443c2a9fe9004fd027eb7a3efe1 115 SUPERFAMILY SSF56399 17 110 1.09E-32 T 11-11-2016 RB7823 0c8cbec39a4a56f0f43f08d28fbd0831 501 Gene3D G3DSA:3.40.640.10 143 354 2.3E-51 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB7823 0c8cbec39a4a56f0f43f08d28fbd0831 501 Pfam PF00155 Aminotransferase class I and II 128 482 1.9E-55 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RB7823 0c8cbec39a4a56f0f43f08d28fbd0831 501 SUPERFAMILY SSF53383 99 486 1.5E-99 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB7823 0c8cbec39a4a56f0f43f08d28fbd0831 501 Gene3D G3DSA:3.90.1150.10 355 486 1.6E-39 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 Gene3D G3DSA:1.20.58.100 457 573 3.8E-27 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 Pfam PF00890 FAD binding domain 10 424 7.8E-75 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 SUPERFAMILY SSF46977 478 656 4.71E-35 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 Gene3D G3DSA:3.90.700.10 242 365 1.9E-25 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-11-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 Gene3D G3DSA:3.50.50.60 367 444 2.2E-81 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 Gene3D G3DSA:3.50.50.60 6 241 2.2E-81 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 10 636 2.8E-216 T 11-11-2016 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 SUPERFAMILY SSF56425 236 371 1.08E-33 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 Pfam PF02910 Fumarate reductase flavoprotein C-term 486 636 5.6E-38 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 SUPERFAMILY SSF51905 8 252 3.55E-55 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10554 c5b25d7c09d32f8ed01f24220d02b896 669 SUPERFAMILY SSF51905 387 447 3.55E-55 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5982 3c241c3f774b28e3ee3681f9d8f9eafb 445 Gene3D G3DSA:1.20.1250.20 47 193 3.2E-5 T 11-11-2016 RB5982 3c241c3f774b28e3ee3681f9d8f9eafb 445 SUPERFAMILY SSF103473 17 429 4.97E-26 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB5982 3c241c3f774b28e3ee3681f9d8f9eafb 445 Pfam PF07690 Major Facilitator Superfamily 43 365 2.2E-11 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB5982 3c241c3f774b28e3ee3681f9d8f9eafb 445 Gene3D G3DSA:1.20.1250.20 245 434 3.8E-4 T 11-11-2016 RB9943 0dae2a4ca95f06456d6658044b967ad1 435 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 205 434 1.6E-68 T 11-11-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 RB9943 0dae2a4ca95f06456d6658044b967ad1 435 Pfam PF07670 Nucleoside recognition 103 199 7.4E-9 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RB9943 0dae2a4ca95f06456d6658044b967ad1 435 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 15 86 2.4E-23 T 11-11-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 RB12683 bfeee1d50712b72f8dad59ece117a644 580 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 262 316 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 SUPERFAMILY SSF81442 36 549 1.83E-160 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 31 56 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 151 163 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 330 351 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 443 464 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 412 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 110 134 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 180 198 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 209 228 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 306 321 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 365 383 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 82 105 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 PRINTS PR01165 Cytochrome c oxidase subunit I signature 260 281 6.9E-99 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 Gene3D G3DSA:1.20.210.10 25 544 3.2E-176 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12683 bfeee1d50712b72f8dad59ece117a644 580 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 40 485 8.7E-133 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB5151 b6a05f91b56b2d941d926288d741ab4a 415 TIGRFAM TIGR02079 THD1: threonine dehydratase 8 415 4.5E-218 T 11-11-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RB5151 b6a05f91b56b2d941d926288d741ab4a 415 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 45 58 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RB5151 b6a05f91b56b2d941d926288d741ab4a 415 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 323 414 6.1E-23 T 11-11-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RB5151 b6a05f91b56b2d941d926288d741ab4a 415 SUPERFAMILY SSF53686 8 358 4.32E-98 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB5151 b6a05f91b56b2d941d926288d741ab4a 415 SUPERFAMILY SSF55021 332 406 2.65E-10 T 11-11-2016 RB5151 b6a05f91b56b2d941d926288d741ab4a 415 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 307 6.9E-81 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB5151 b6a05f91b56b2d941d926288d741ab4a 415 Gene3D G3DSA:3.40.50.1100 99 340 5.3E-84 T 11-11-2016 RB7016 8658364764d2b499549e40ae7079649d 241 Gene3D G3DSA:3.40.50.2300 139 217 8.3E-9 T 11-11-2016 RB7016 8658364764d2b499549e40ae7079649d 241 Gene3D G3DSA:3.40.50.2300 62 103 8.3E-9 T 11-11-2016 RB7016 8658364764d2b499549e40ae7079649d 241 SUPERFAMILY SSF52172 65 105 2.49E-8 T 11-11-2016 IPR011006 CheY-like superfamily RB7016 8658364764d2b499549e40ae7079649d 241 SUPERFAMILY SSF52172 141 224 2.49E-8 T 11-11-2016 IPR011006 CheY-like superfamily RB1129 c06590141e8245fefae738ee14319c66 895 Hamap MF_01871 UPF0753 protein . 47 867 23.109 T 11-11-2016 IPR018752 Uncharacterised protein family UPF0753 RB1129 c06590141e8245fefae738ee14319c66 895 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 53 854 1.7E-246 T 11-11-2016 IPR018752 Uncharacterised protein family UPF0753 RB8030 e0ec512e6c576b63e463d25109313f56 480 Pfam PF00884 Sulfatase 66 387 3.1E-54 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB8030 e0ec512e6c576b63e463d25109313f56 480 SUPERFAMILY SSF53649 66 446 1.74E-96 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8030 e0ec512e6c576b63e463d25109313f56 480 Gene3D G3DSA:3.40.720.10 65 434 3.9E-91 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8030 e0ec512e6c576b63e463d25109313f56 480 ProSitePatterns PS00523 Sulfatases signature 1. 111 123 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 SUPERFAMILY SSF81301 142 349 5.23E-36 T 11-11-2016 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 750 997 1.4E-41 T 11-11-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 169 348 7.6E-26 T 11-11-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 Gene3D G3DSA:3.30.460.10 829 1002 6.0E-33 T 11-11-2016 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 Gene3D G3DSA:3.30.460.10 250 447 4.4E-43 T 11-11-2016 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 SUPERFAMILY SSF81301 720 1002 8.66E-54 T 11-11-2016 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 Pfam PF08335 GlnD PII-uridylyltransferase 477 602 1.0E-17 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 Pfam PF08335 GlnD PII-uridylyltransferase 1012 1157 2.6E-14 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 SUPERFAMILY SSF81593 453 612 1.65E-24 T 11-11-2016 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 SUPERFAMILY SSF81593 1011 1158 8.63E-21 T 11-11-2016 RB6825 4520396eb6fe26414ed47a5faa95e12e 1161 SUPERFAMILY SSF81301 402 446 1.73E-6 T 11-11-2016 RB11101 d61d0bc698c0759031064c14e5229553 396 Gene3D G3DSA:3.30.700.10 47 110 6.4E-7 T 11-11-2016 RB11101 d61d0bc698c0759031064c14e5229553 396 Pfam PF13633 Prokaryotic N-terminal methylation site 46 70 1.3E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11101 d61d0bc698c0759031064c14e5229553 396 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 46 66 5.3E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11101 d61d0bc698c0759031064c14e5229553 396 Pfam PF07596 Protein of unknown function (DUF1559) 71 375 5.8E-56 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB11101 d61d0bc698c0759031064c14e5229553 396 SUPERFAMILY SSF54523 47 123 1.41E-21 T 11-11-2016 RB1606 7cfca3aa388936f1fad234dfc3842747 238 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 116 195 1.1E-29 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RB1606 7cfca3aa388936f1fad234dfc3842747 238 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 117 196 3.8E-28 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RB1606 7cfca3aa388936f1fad234dfc3842747 238 Gene3D G3DSA:1.10.10.10 115 196 4.3E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1606 7cfca3aa388936f1fad234dfc3842747 238 SUPERFAMILY SSF53155 31 114 1.63E-11 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RB1606 7cfca3aa388936f1fad234dfc3842747 238 Gene3D G3DSA:3.30.160.70 30 114 1.8E-19 T 11-11-2016 RB1606 7cfca3aa388936f1fad234dfc3842747 238 SUPERFAMILY SSF46767 115 195 1.24E-26 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RB2117 eb697dde4dbf8aefaf3f092d8618749d 113 SMART SM00028 40 73 2.0E-4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB2117 eb697dde4dbf8aefaf3f092d8618749d 113 SUPERFAMILY SSF48452 16 88 1.08E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2117 eb697dde4dbf8aefaf3f092d8618749d 113 Pfam PF07719 Tetratricopeptide repeat 41 73 2.1E-6 T 11-11-2016 IPR013105 Tetratricopeptide repeat 2 RB2117 eb697dde4dbf8aefaf3f092d8618749d 113 Gene3D G3DSA:1.25.40.10 10 111 6.0E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4269 cf8f8c64a5395866ec4d6f743dad9f56 282 Gene3D G3DSA:2.40.10.10 90 169 4.7E-6 T 11-11-2016 RB4269 cf8f8c64a5395866ec4d6f743dad9f56 282 SUPERFAMILY SSF50494 38 234 4.73E-17 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB736 136071441193a74970d180aad740ff62 824 Pfam PF06439 Domain of Unknown Function (DUF1080) 49 246 8.7E-41 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB736 136071441193a74970d180aad740ff62 824 SUPERFAMILY SSF48208 393 789 3.95E-44 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB736 136071441193a74970d180aad740ff62 824 Pfam PF05592 Bacterial alpha-L-rhamnosidase 267 784 2.4E-132 T 11-11-2016 IPR008902 Bacterial alpha-L-rhamnosidase RB9115 5b7ebeac1c37ae8b8c5f1995cd845cc7 167 Gene3D G3DSA:3.40.1350.10 46 159 8.0E-28 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 RB9115 5b7ebeac1c37ae8b8c5f1995cd845cc7 167 Hamap MF_00048 UPF0102 protein YraN [yraN]. 39 151 19.052 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 RB9115 5b7ebeac1c37ae8b8c5f1995cd845cc7 167 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 40 157 2.9E-20 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 RB9115 5b7ebeac1c37ae8b8c5f1995cd845cc7 167 SUPERFAMILY SSF52980 40 157 5.63E-21 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RB9115 5b7ebeac1c37ae8b8c5f1995cd845cc7 167 Pfam PF02021 Uncharacterised protein family UPF0102 46 138 2.1E-22 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 RB10907 04cf2d9e5a3118a26a8ee1b4ab19cf1d 252 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 215 1.5E-27 T 11-11-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RB10907 04cf2d9e5a3118a26a8ee1b4ab19cf1d 252 Gene3D G3DSA:3.60.21.10 2 251 1.2E-75 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10907 04cf2d9e5a3118a26a8ee1b4ab19cf1d 252 SUPERFAMILY SSF56300 2 251 1.32E-58 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10907 04cf2d9e5a3118a26a8ee1b4ab19cf1d 252 PIRSF PIRSF000883 1 252 2.8E-54 T 11-11-2016 IPR011152 Phosphoesterase MJ0912 RB8695 3d17da0c54a0e48315d1aadaaac8c7dc 131 Gene3D G3DSA:1.10.10.10 7 76 9.3E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8695 3d17da0c54a0e48315d1aadaaac8c7dc 131 SUPERFAMILY SSF46785 8 79 4.1E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8695 3d17da0c54a0e48315d1aadaaac8c7dc 131 SMART SM00345 16 75 2.5E-16 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RB8695 3d17da0c54a0e48315d1aadaaac8c7dc 131 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 3.8E-19 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RB12421 b7821d9677865a40f145cc43b52622b8 513 Pfam PF13516 Leucine Rich repeat 455 470 0.98 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 RB12421 b7821d9677865a40f145cc43b52622b8 513 Pfam PF13516 Leucine Rich repeat 334 355 0.031 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 RB12421 b7821d9677865a40f145cc43b52622b8 513 Pfam PF13516 Leucine Rich repeat 238 259 0.026 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 RB12421 b7821d9677865a40f145cc43b52622b8 513 SMART SM00367 381 406 45.0 T 11-11-2016 IPR006553 Leucine-rich repeat, cysteine-containing subtype RB12421 b7821d9677865a40f145cc43b52622b8 513 SMART SM00367 333 357 0.95 T 11-11-2016 IPR006553 Leucine-rich repeat, cysteine-containing subtype RB12421 b7821d9677865a40f145cc43b52622b8 513 SMART SM00367 454 478 31.0 T 11-11-2016 IPR006553 Leucine-rich repeat, cysteine-containing subtype RB12421 b7821d9677865a40f145cc43b52622b8 513 SMART SM00367 189 213 550.0 T 11-11-2016 IPR006553 Leucine-rich repeat, cysteine-containing subtype RB12421 b7821d9677865a40f145cc43b52622b8 513 SMART SM00367 237 261 78.0 T 11-11-2016 IPR006553 Leucine-rich repeat, cysteine-containing subtype RB12421 b7821d9677865a40f145cc43b52622b8 513 Gene3D G3DSA:3.80.10.10 292 510 3.4E-36 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB12421 b7821d9677865a40f145cc43b52622b8 513 SUPERFAMILY SSF52047 183 501 4.32E-39 T 11-11-2016 RB12421 b7821d9677865a40f145cc43b52622b8 513 Gene3D G3DSA:3.80.10.10 158 291 3.3E-17 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB12421 b7821d9677865a40f145cc43b52622b8 513 SMART SM00368 333 362 6.3 T 11-11-2016 RB12421 b7821d9677865a40f145cc43b52622b8 513 SMART SM00368 454 483 58.0 T 11-11-2016 RB12421 b7821d9677865a40f145cc43b52622b8 513 SMART SM00368 237 266 2.1 T 11-11-2016 RB4165 bb726bd00b0ce22cf5cef3ecff4b9eea 721 Pfam PF08281 Sigma-70, region 4 161 211 9.5E-12 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4165 bb726bd00b0ce22cf5cef3ecff4b9eea 721 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 61 215 4.2E-22 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4165 bb726bd00b0ce22cf5cef3ecff4b9eea 721 Pfam PF04542 Sigma-70 region 2 66 125 1.1E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4165 bb726bd00b0ce22cf5cef3ecff4b9eea 721 SUPERFAMILY SSF88946 47 139 7.85E-15 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4165 bb726bd00b0ce22cf5cef3ecff4b9eea 721 Gene3D G3DSA:1.10.10.10 159 215 2.3E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB4165 bb726bd00b0ce22cf5cef3ecff4b9eea 721 Gene3D G3DSA:1.10.1740.10 47 147 6.9E-16 T 11-11-2016 RB4165 bb726bd00b0ce22cf5cef3ecff4b9eea 721 SUPERFAMILY SSF88659 147 215 5.98E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8979 c03d335ee86e24ec7a58e43c8930a027 552 Gene3D G3DSA:3.30.1330.90 20 143 3.4E-13 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RB8979 c03d335ee86e24ec7a58e43c8930a027 552 SUPERFAMILY SSF143548 26 144 1.57E-14 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RB8979 c03d335ee86e24ec7a58e43c8930a027 552 Pfam PF03313 Serine dehydratase alpha chain 261 515 5.8E-54 T 11-11-2016 IPR005130 Serine dehydratase-like, alpha subunit RB13126 26ce33f91476ebaed80b94dbaf9f1689 502 Pfam PF07394 Protein of unknown function (DUF1501) 84 500 7.4E-159 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB13126 26ce33f91476ebaed80b94dbaf9f1689 502 Gene3D G3DSA:3.40.720.10 370 475 6.1E-5 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB13126 26ce33f91476ebaed80b94dbaf9f1689 502 SUPERFAMILY SSF53649 321 478 1.08E-21 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 Pfam PF04389 Peptidase family M28 466 674 2.3E-53 T 11-11-2016 IPR007484 Peptidase M28 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 SUPERFAMILY SSF52025 169 292 1.22E-14 T 11-11-2016 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 SUPERFAMILY SSF52025 341 405 1.22E-14 T 11-11-2016 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 Gene3D G3DSA:3.50.30.30 344 405 6.5E-11 T 11-11-2016 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 Gene3D G3DSA:3.50.30.30 178 291 6.5E-11 T 11-11-2016 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 SUPERFAMILY SSF53187 96 140 8.47E-59 T 11-11-2016 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 SUPERFAMILY SSF53187 450 681 8.47E-59 T 11-11-2016 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 SMART SM00228 703 771 9.0E-5 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 Gene3D G3DSA:2.30.42.10 708 782 1.7E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 Gene3D G3DSA:3.40.630.10 85 147 9.0E-61 T 11-11-2016 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 Gene3D G3DSA:3.40.630.10 458 686 9.0E-61 T 11-11-2016 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 Pfam PF13180 PDZ domain 704 780 1.0E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 SUPERFAMILY SSF50156 699 780 3.94E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB4928 a26fc7523752c5c4134ec3a375b5ad81 783 Pfam PF02225 PA domain 224 399 4.4E-7 T 11-11-2016 IPR003137 PA domain RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 262 9.9E-58 T 11-11-2016 RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 SUPERFAMILY SSF51735 16 263 4.61E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 Gene3D G3DSA:3.40.50.720 13 263 1.7E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 4.2E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 4.2E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 4.2E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 4.2E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 4.2E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10454 a622b1e6af3cde6f624e139be5cc75ab 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 4.2E-25 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10350 5a3f1494c70643c83ec607a4d704c9d1 163 Pfam PF04134 Protein of unknown function, DUF393 42 153 3.6E-24 T 11-11-2016 IPR007263 Protein of unknown function DUF393 RB1270 677a7d413877620a5a57d626b847c1f5 154 SUPERFAMILY SSF55298 1 152 2.2E-49 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RB1270 677a7d413877620a5a57d626b847c1f5 154 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 145 4.0E-25 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RB1270 677a7d413877620a5a57d626b847c1f5 154 Gene3D G3DSA:3.30.1330.40 2 152 7.2E-58 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RB5126 db75fe324a1436363e9e1950bd0e4e1f 576 Pfam PF02119 Flagellar P-ring protein 60 294 3.2E-15 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 RB5126 db75fe324a1436363e9e1950bd0e4e1f 576 Pfam PF13646 HEAT repeats 324 396 3.9E-8 T 11-11-2016 RB5126 db75fe324a1436363e9e1950bd0e4e1f 576 Gene3D G3DSA:1.25.10.10 308 411 7.5E-11 T 11-11-2016 IPR011989 Armadillo-like helical RB5126 db75fe324a1436363e9e1950bd0e4e1f 576 SUPERFAMILY SSF48371 311 407 1.31E-10 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB5126 db75fe324a1436363e9e1950bd0e4e1f 576 SMART SM00567 E-Z type HEAT repeats 366 395 430.0 T 11-11-2016 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RB5126 db75fe324a1436363e9e1950bd0e4e1f 576 SMART SM00567 E-Z type HEAT repeats 336 365 0.058 T 11-11-2016 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RB5126 db75fe324a1436363e9e1950bd0e4e1f 576 SMART SM00567 E-Z type HEAT repeats 306 334 960.0 T 11-11-2016 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RB8140 d8b29fa5fcbe77e2b23d6c76de9e7151 580 Gene3D G3DSA:3.40.30.10 16 41 8.8E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8140 d8b29fa5fcbe77e2b23d6c76de9e7151 580 Gene3D G3DSA:3.40.30.10 438 579 8.8E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8140 d8b29fa5fcbe77e2b23d6c76de9e7151 580 SUPERFAMILY SSF52833 447 579 7.6E-15 T 11-11-2016 IPR012336 Thioredoxin-like fold RB8140 d8b29fa5fcbe77e2b23d6c76de9e7151 580 Pfam PF00578 AhpC/TSA family 449 563 1.2E-4 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB5763 536ce46a1904cbe038e26e63b8b35cf8 404 SUPERFAMILY SSF69318 37 400 1.44E-46 T 11-11-2016 RB5763 536ce46a1904cbe038e26e63b8b35cf8 404 Pfam PF01839 FG-GAP repeat 53 71 3.4E-5 T 11-11-2016 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 RB5763 536ce46a1904cbe038e26e63b8b35cf8 404 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 159 228 2.7E-9 T 11-11-2016 RB5763 536ce46a1904cbe038e26e63b8b35cf8 404 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 263 327 1.4E-8 T 11-11-2016 RB5763 536ce46a1904cbe038e26e63b8b35cf8 404 Gene3D G3DSA:2.130.10.130 53 229 1.4E-13 T 11-11-2016 RB5763 536ce46a1904cbe038e26e63b8b35cf8 404 Gene3D G3DSA:2.130.10.130 262 396 3.3E-13 T 11-11-2016 RB10471 13f20ed80345e6568ab4906e2d2f9706 151 PIRSF PIRSF002181 2 151 1.9E-48 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RB10471 13f20ed80345e6568ab4906e2d2f9706 151 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 18 141 27.418 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RB10471 13f20ed80345e6568ab4906e2d2f9706 151 SUPERFAMILY SSF52161 5 141 4.32E-55 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RB10471 13f20ed80345e6568ab4906e2d2f9706 151 Gene3D G3DSA:3.90.1180.10 6 142 2.9E-59 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RB10471 13f20ed80345e6568ab4906e2d2f9706 151 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 142 5.9E-55 T 11-11-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB10471 13f20ed80345e6568ab4906e2d2f9706 151 Pfam PF00572 Ribosomal protein L13 17 139 2.9E-53 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RB12510 f15e7cb93f0f6def91682f8b2f33d263 350 SUPERFAMILY SSF51569 6 345 3.56E-130 T 11-11-2016 RB12510 f15e7cb93f0f6def91682f8b2f33d263 350 Pfam PF00793 DAHP synthetase I family 43 335 7.0E-98 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RB12510 f15e7cb93f0f6def91682f8b2f33d263 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 347 1.3E-155 T 11-11-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RB12510 f15e7cb93f0f6def91682f8b2f33d263 350 PIRSF PIRSF001361 1 350 4.2E-162 T 11-11-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RB12510 f15e7cb93f0f6def91682f8b2f33d263 350 Gene3D G3DSA:3.20.20.70 8 348 1.0E-151 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB11160 29cfa90862a9aa29165f265df3099c46 263 SUPERFAMILY SSF51735 20 252 1.72E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11160 29cfa90862a9aa29165f265df3099c46 263 Pfam PF13460 NAD(P)H-binding 28 245 1.6E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11160 29cfa90862a9aa29165f265df3099c46 263 Gene3D G3DSA:3.40.50.720 18 250 2.0E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5971 2301e565bd4cddf49bc0b9d442b89d1f 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 314 1.1E-44 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RB6670 c70b2330bb18b90127d9d27d64d87250 372 Gene3D G3DSA:3.90.870.10 25 223 3.6E-63 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RB6670 c70b2330bb18b90127d9d27d64d87250 372 Pfam PF03481 Putative GTP-binding controlling metal-binding 222 363 4.0E-14 T 11-11-2016 IPR005145 Putative GTP-binding controlling metal-binding domain RB6670 c70b2330bb18b90127d9d27d64d87250 372 SUPERFAMILY SSF55821 27 220 2.81E-53 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RB6670 c70b2330bb18b90127d9d27d64d87250 372 Pfam PF01300 Telomere recombination 35 216 9.4E-50 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 RB6670 c70b2330bb18b90127d9d27d64d87250 372 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 26 226 2.1E-46 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 RB6670 c70b2330bb18b90127d9d27d64d87250 372 PIRSF PIRSF004930 16 368 1.7E-86 T 11-11-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RB3320 40a176c5cb3f694a09a2347fa06e7dd1 528 Gene3D G3DSA:2.60.40.1610 109 253 2.6E-56 T 11-11-2016 IPR010679 Domain of unknown function DUF1254 RB3320 40a176c5cb3f694a09a2347fa06e7dd1 528 Pfam PF06863 Protein of unknown function (DUF1254) 110 248 1.7E-27 T 11-11-2016 IPR010679 Domain of unknown function DUF1254 RB3320 40a176c5cb3f694a09a2347fa06e7dd1 528 Pfam PF06742 Protein of unknown function (DUF1214) 403 507 1.3E-26 T 11-11-2016 IPR010621 Domain of unknown function DUF1214 RB3320 40a176c5cb3f694a09a2347fa06e7dd1 528 Gene3D G3DSA:2.60.120.600 348 523 1.2E-53 T 11-11-2016 IPR010621 Domain of unknown function DUF1214 RB3320 40a176c5cb3f694a09a2347fa06e7dd1 528 SUPERFAMILY SSF160935 52 522 1.57E-130 T 11-11-2016 RB3320 40a176c5cb3f694a09a2347fa06e7dd1 528 Gene3D G3DSA:1.10.3360.10 254 342 1.2E-39 T 11-11-2016 IPR023289 VPA0735-like domain RB7772 9ce31199529635f84a9c96c41562f6b5 707 Pfam PF00884 Sulfatase 49 412 2.3E-69 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB7772 9ce31199529635f84a9c96c41562f6b5 707 Gene3D G3DSA:3.40.720.10 47 440 4.8E-110 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7772 9ce31199529635f84a9c96c41562f6b5 707 SUPERFAMILY SSF53649 48 508 6.25E-130 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7772 9ce31199529635f84a9c96c41562f6b5 707 ProSitePatterns PS00149 Sulfatases signature 2. 130 140 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB7772 9ce31199529635f84a9c96c41562f6b5 707 Gene3D G3DSA:3.30.1120.10 452 509 3.4E-16 T 11-11-2016 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 Gene3D G3DSA:1.10.240.10 199 287 1.7E-31 T 11-11-2016 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 319 8.5E-89 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 320 36.028 T 11-11-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 1.3E-22 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 1.3E-22 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 1.3E-22 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 1.3E-22 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 SUPERFAMILY SSF52374 2 319 1.06E-82 T 11-11-2016 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 Pfam PF00579 tRNA synthetases class I (W and Y) 1 274 9.2E-60 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 RB6436 d0c7dfe70e3f2d58d8b8bb033e8c980d 320 Gene3D G3DSA:3.40.50.620 2 198 2.1E-77 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 Gene3D G3DSA:3.50.50.60 45 208 3.8E-10 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 SUPERFAMILY SSF51905 358 501 1.9E-6 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 SUPERFAMILY SSF51905 239 287 1.9E-6 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 242 267 5.6E-6 T 11-11-2016 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 200 209 5.6E-6 T 11-11-2016 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 65 5.6E-6 T 11-11-2016 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 44 63 1.3E-5 T 11-11-2016 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 197 215 1.3E-5 T 11-11-2016 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 260 1.3E-5 T 11-11-2016 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 Gene3D G3DSA:3.50.50.60 358 506 6.7E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 Gene3D G3DSA:3.50.50.60 240 284 6.7E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 SUPERFAMILY SSF51905 44 278 4.63E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9484 017f9f35a4a380f167d63b38c2d49f3e 519 Pfam PF13454 FAD-NAD(P)-binding 45 207 8.2E-32 T 11-11-2016 RB6963 f65a116e8af31825696a783e09548353 379 Gene3D G3DSA:3.20.20.70 101 325 3.7E-14 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6963 f65a116e8af31825696a783e09548353 379 SUPERFAMILY SSF102114 97 307 2.22E-13 T 11-11-2016 RB6963 f65a116e8af31825696a783e09548353 379 Pfam PF04055 Radical SAM superfamily 105 268 1.1E-8 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB1411 83bc03d7ddc8f9e4e4369f6d79bb1cb4 342 Pfam PF00701 Dihydrodipicolinate synthetase family 35 266 7.3E-26 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB1411 83bc03d7ddc8f9e4e4369f6d79bb1cb4 342 PIRSF PIRSF001365 30 338 2.9E-56 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB1411 83bc03d7ddc8f9e4e4369f6d79bb1cb4 342 PRINTS PR00146 Dihydrodipicolinate synthase signature 160 177 8.0E-7 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB1411 83bc03d7ddc8f9e4e4369f6d79bb1cb4 342 PRINTS PR00146 Dihydrodipicolinate synthase signature 101 119 8.0E-7 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB1411 83bc03d7ddc8f9e4e4369f6d79bb1cb4 342 PRINTS PR00146 Dihydrodipicolinate synthase signature 68 89 8.0E-7 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB1411 83bc03d7ddc8f9e4e4369f6d79bb1cb4 342 SMART SM01130 34 331 3.7E-42 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB1411 83bc03d7ddc8f9e4e4369f6d79bb1cb4 342 SUPERFAMILY SSF51569 30 323 3.87E-48 T 11-11-2016 RB1411 83bc03d7ddc8f9e4e4369f6d79bb1cb4 342 Gene3D G3DSA:3.20.20.70 31 333 1.3E-63 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6400 1e9bfbcc9bc5b79a751856cf60d6b3b6 425 Pfam PF13360 PQQ-like domain 60 214 4.2E-13 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB6400 1e9bfbcc9bc5b79a751856cf60d6b3b6 425 SUPERFAMILY SSF50998 27 403 2.75E-33 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB6400 1e9bfbcc9bc5b79a751856cf60d6b3b6 425 Gene3D G3DSA:2.140.10.10 12 407 9.2E-38 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB7705 506965ce7194bc022ac57cf2ab3b9b8b 174 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 82 95 - T 11-11-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 RB7705 506965ce7194bc022ac57cf2ab3b9b8b 174 SMART SM00852 24 167 1.7E-24 T 11-11-2016 IPR001453 MoaB/Mog domain RB7705 506965ce7194bc022ac57cf2ab3b9b8b 174 Gene3D G3DSA:3.40.980.10 16 172 1.2E-49 T 11-11-2016 IPR001453 MoaB/Mog domain RB7705 506965ce7194bc022ac57cf2ab3b9b8b 174 Pfam PF00994 Probable molybdopterin binding domain 24 167 1.2E-33 T 11-11-2016 IPR001453 MoaB/Mog domain RB7705 506965ce7194bc022ac57cf2ab3b9b8b 174 SUPERFAMILY SSF53218 15 172 3.66E-43 T 11-11-2016 IPR001453 MoaB/Mog domain RB7705 506965ce7194bc022ac57cf2ab3b9b8b 174 PIRSF PIRSF006443 7 174 2.1E-59 T 11-11-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 RB7705 506965ce7194bc022ac57cf2ab3b9b8b 174 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 21 163 2.6E-32 T 11-11-2016 IPR001453 MoaB/Mog domain RB1780 fbd698c44eb5fc5c8944439c5224ff59 731 Gene3D G3DSA:3.40.50.1820 601 671 2.5E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1780 fbd698c44eb5fc5c8944439c5224ff59 731 Gene3D G3DSA:3.40.50.1820 391 487 2.5E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1780 fbd698c44eb5fc5c8944439c5224ff59 731 Gene3D G3DSA:3.40.50.1820 520 544 2.5E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1780 fbd698c44eb5fc5c8944439c5224ff59 731 SUPERFAMILY SSF53474 388 640 5.67E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10880 ba22a1054d5b1da556013a0eb067122a 477 Pfam PF04055 Radical SAM superfamily 183 353 5.3E-26 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB10880 ba22a1054d5b1da556013a0eb067122a 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 181 201 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RB10880 ba22a1054d5b1da556013a0eb067122a 477 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 35 473 5.1E-152 T 11-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RB10880 ba22a1054d5b1da556013a0eb067122a 477 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 32 476 63.766 T 11-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RB10880 ba22a1054d5b1da556013a0eb067122a 477 Gene3D G3DSA:2.40.50.140 411 476 7.8E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB10880 ba22a1054d5b1da556013a0eb067122a 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 33 436 4.2E-122 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RB10880 ba22a1054d5b1da556013a0eb067122a 477 Gene3D G3DSA:3.80.30.20 175 406 2.5E-71 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB10880 ba22a1054d5b1da556013a0eb067122a 477 SMART SM00729 177 395 1.9E-49 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB10880 ba22a1054d5b1da556013a0eb067122a 477 SUPERFAMILY SSF102114 169 402 2.75E-57 T 11-11-2016 RB10880 ba22a1054d5b1da556013a0eb067122a 477 Pfam PF00919 Uncharacterized protein family UPF0004 33 132 5.3E-28 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RB6722 912ab557284fe16ec7f5a7c6d8de49ed 389 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 30 1.1E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6722 912ab557284fe16ec7f5a7c6d8de49ed 389 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6722 912ab557284fe16ec7f5a7c6d8de49ed 389 Gene3D G3DSA:3.30.700.10 12 80 8.4E-7 T 11-11-2016 RB6722 912ab557284fe16ec7f5a7c6d8de49ed 389 Pfam PF07596 Protein of unknown function (DUF1559) 36 346 9.5E-57 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6722 912ab557284fe16ec7f5a7c6d8de49ed 389 SUPERFAMILY SSF54523 12 149 1.41E-24 T 11-11-2016 RB6722 912ab557284fe16ec7f5a7c6d8de49ed 389 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 4.5E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7662 0c7e07d0f395492d3cf335a230b42099 202 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 40 182 2.3E-58 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RB7662 0c7e07d0f395492d3cf335a230b42099 202 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 69 82 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RB7662 0c7e07d0f395492d3cf335a230b42099 202 SUPERFAMILY SSF54211 95 187 1.52E-31 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB7662 0c7e07d0f395492d3cf335a230b42099 202 Gene3D G3DSA:3.30.230.40 10 97 1.4E-35 T 11-11-2016 RB7662 0c7e07d0f395492d3cf335a230b42099 202 Gene3D G3DSA:3.30.230.40 98 202 4.7E-28 T 11-11-2016 RB7662 0c7e07d0f395492d3cf335a230b42099 202 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 164 176 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RB7662 0c7e07d0f395492d3cf335a230b42099 202 SUPERFAMILY SSF54211 10 93 3.04E-31 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB7662 0c7e07d0f395492d3cf335a230b42099 202 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 10 202 39.589 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RB2732 55062ea710d3609f100eff4c47ffef84 555 Pfam PF00884 Sulfatase 105 380 6.9E-45 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2732 55062ea710d3609f100eff4c47ffef84 555 SUPERFAMILY SSF53649 103 529 7.46E-100 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2732 55062ea710d3609f100eff4c47ffef84 555 Gene3D G3DSA:3.40.720.10 103 400 4.4E-75 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2732 55062ea710d3609f100eff4c47ffef84 555 Gene3D G3DSA:3.30.1120.10 410 441 1.3E-21 T 11-11-2016 RB2732 55062ea710d3609f100eff4c47ffef84 555 Gene3D G3DSA:3.30.1120.10 485 535 1.3E-21 T 11-11-2016 RB678 c54aaf99b83c44a7fee1add631a6a44f 427 SUPERFAMILY SSF51658 6 420 6.44E-82 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB678 c54aaf99b83c44a7fee1add631a6a44f 427 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 427 253.399 T 11-11-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 RB678 c54aaf99b83c44a7fee1add631a6a44f 427 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 11 420 0.0 T 11-11-2016 RB678 c54aaf99b83c44a7fee1add631a6a44f 427 Gene3D G3DSA:3.20.20.150 3 420 1.4E-205 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB678 c54aaf99b83c44a7fee1add631a6a44f 427 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 7 420 6.2E-200 T 11-11-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 RB678 c54aaf99b83c44a7fee1add631a6a44f 427 Pfam PF06134 L-rhamnose isomerase (RhaA) 6 420 5.7E-201 T 11-11-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 RB4512 34731895ef9a29f5a823d9cd943e255b 407 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 242 338 2.1E-30 T 11-11-2016 IPR019236 Domain of unknown function DUF2183 RB4022 f03ef4710cefae5b17b7f17111a308c1 247 Pfam PF02230 Phospholipase/Carboxylesterase 58 240 3.9E-10 T 11-11-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 RB4022 f03ef4710cefae5b17b7f17111a308c1 247 SUPERFAMILY SSF53474 61 246 5.85E-31 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4022 f03ef4710cefae5b17b7f17111a308c1 247 Gene3D G3DSA:3.40.50.1820 66 245 5.1E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5279 69d18ba7d10643135b8a639c2d48ec8d 308 SUPERFAMILY SSF53474 38 193 3.93E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5279 69d18ba7d10643135b8a639c2d48ec8d 308 Gene3D G3DSA:3.40.50.1820 59 299 6.4E-8 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11266 d0ba0e765b26a27fd489dedfc8ad5732 304 SUPERFAMILY SSF56300 1 248 8.52E-47 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB11266 d0ba0e765b26a27fd489dedfc8ad5732 304 Gene3D G3DSA:3.60.21.10 1 243 5.1E-35 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB11266 d0ba0e765b26a27fd489dedfc8ad5732 304 Pfam PF00149 Calcineurin-like phosphoesterase 1 192 1.3E-17 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 66 115 2.9E-6 T 11-11-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Pfam PF13646 HEAT repeats 630 702 1.0E-7 T 11-11-2016 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Gene3D G3DSA:1.25.10.10 629 719 3.3E-7 T 11-11-2016 IPR011989 Armadillo-like helical RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Gene3D G3DSA:1.25.10.10 894 1006 3.3E-7 T 11-11-2016 IPR011989 Armadillo-like helical RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Gene3D G3DSA:1.25.10.10 819 855 3.3E-7 T 11-11-2016 IPR011989 Armadillo-like helical RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 1120 1251 1.7E-28 T 11-11-2016 IPR013427 Haem-binding domain, putative RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Gene3D G3DSA:2.120.10.30 199 555 9.8E-48 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 SUPERFAMILY SSF46626 1118 1187 5.91E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 SUPERFAMILY SSF46626 1228 1251 5.91E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 SUPERFAMILY SSF48371 901 953 7.73E-6 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 SUPERFAMILY SSF48371 628 872 7.73E-6 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 SUPERFAMILY SSF50952 198 542 7.45E-26 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 SUPERFAMILY SSF49785 39 121 5.95E-13 T 11-11-2016 IPR008979 Galactose-binding domain-like RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Gene3D G3DSA:1.10.760.10 1111 1252 1.0E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 SUPERFAMILY SSF48371 606 716 6.14E-11 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Gene3D G3DSA:2.60.120.260 162 175 1.7E-14 T 11-11-2016 IPR008979 Galactose-binding domain-like RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Gene3D G3DSA:2.60.120.260 44 116 1.7E-14 T 11-11-2016 IPR008979 Galactose-binding domain-like RB9120 f5900ba5f885df5aa4ffdbcae06b387a 1263 Pfam PF00034 Cytochrome c 1123 1252 1.8E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 SUPERFAMILY SSF82866 295 487 4.97E-39 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Gene3D G3DSA:3.30.70.1430 639 699 8.3E-5 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Gene3D G3DSA:3.30.70.1430 576 605 8.3E-5 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 SUPERFAMILY SSF82714 185 269 1.44E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 3.6E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.6E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.6E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.6E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 SUPERFAMILY SSF82693 271 325 9.94E-8 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 SUPERFAMILY SSF82693 153 184 9.94E-8 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Gene3D G3DSA:3.30.2090.10 766 842 2.6E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 SUPERFAMILY SSF82693 42 133 1.71E-16 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Pfam PF00873 AcrB/AcrD/AcrF family 15 606 3.0E-81 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Pfam PF00873 AcrB/AcrD/AcrF family 642 1063 8.4E-67 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 SUPERFAMILY SSF82866 840 1064 2.22E-48 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Gene3D G3DSA:3.30.70.1430 42 139 1.5E-18 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Gene3D G3DSA:3.30.2090.10 184 271 2.3E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Gene3D G3DSA:1.10.3850.10 848 1064 8.9E-59 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Gene3D G3DSA:1.20.1640.10 303 488 1.5E-44 T 11-11-2016 RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 SUPERFAMILY SSF82714 766 842 1.7E-9 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RB832 8eb95d4a9b0423f45c5fd96b86dafbb9 1080 Gene3D G3DSA:3.30.70.1320 273 302 5.3E-4 T 11-11-2016 RB11848 2aa902ab6b4e544f674609df4e91c2f1 430 Pfam PF07621 Protein of unknown function (DUF1582) 93 121 1.3E-11 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB11848 2aa902ab6b4e544f674609df4e91c2f1 430 Pfam PF07623 Protein of unknown function (DUF1584) 148 174 1.4E-14 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB10228 82bc830220483d255e54d12c22897d34 400 Pfam PF00437 Type II/IV secretion system protein 160 295 7.9E-36 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB10228 82bc830220483d255e54d12c22897d34 400 SUPERFAMILY SSF52540 39 376 3.06E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10228 82bc830220483d255e54d12c22897d34 400 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 39 382 3.9E-111 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RB10228 82bc830220483d255e54d12c22897d34 400 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 232 246 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB10228 82bc830220483d255e54d12c22897d34 400 Gene3D G3DSA:3.40.50.300 152 383 3.0E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6337 cdecbac150f9c92cd71e2c5cbae2db70 337 Pfam PF06182 ABC-2 family transporter protein 92 336 5.0E-35 T 11-11-2016 IPR010390 Protein of unknown function DUF990 RB5768 9c67b94ad581a22de6a351f03d481ebf 1189 Gene3D G3DSA:3.30.70.100 1077 1160 7.5E-21 T 11-11-2016 RB5768 9c67b94ad581a22de6a351f03d481ebf 1189 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 576 904 1.8E-73 T 11-11-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 RB5768 9c67b94ad581a22de6a351f03d481ebf 1189 SUPERFAMILY SSF82689 1076 1173 2.22E-27 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RB5768 9c67b94ad581a22de6a351f03d481ebf 1189 SUPERFAMILY SSF50182 1007 1072 2.48E-16 T 11-11-2016 IPR010920 LSM domain RB5768 9c67b94ad581a22de6a351f03d481ebf 1189 Gene3D G3DSA:2.30.30.60 1022 1071 1.5E-15 T 11-11-2016 RB5768 9c67b94ad581a22de6a351f03d481ebf 1189 Pfam PF00924 Mechanosensitive ion channel 967 1163 9.4E-55 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RB5768 9c67b94ad581a22de6a351f03d481ebf 1189 SUPERFAMILY SSF82861 921 1005 2.75E-9 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RB11157 6158db943dd6d2503eb85a379df6a9ac 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 114 1.2E-43 T 11-11-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 RB11157 6158db943dd6d2503eb85a379df6a9ac 116 Gene3D G3DSA:3.40.30.10 1 115 2.5E-47 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11157 6158db943dd6d2503eb85a379df6a9ac 116 SUPERFAMILY SSF52833 1 115 1.12E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11157 6158db943dd6d2503eb85a379df6a9ac 116 Pfam PF03960 ArsC family 5 113 4.5E-20 T 11-11-2016 IPR006660 Arsenate reductase-like RB6583 c64d98ffc2836db265442138d748a53c 996 Gene3D G3DSA:1.25.40.10 911 967 2.3E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6583 c64d98ffc2836db265442138d748a53c 996 Gene3D G3DSA:1.25.40.10 223 250 2.3E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6583 c64d98ffc2836db265442138d748a53c 996 SUPERFAMILY SSF48452 903 987 3.8E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB658 cee0a046a471fe03931218b5b08c3c25 412 Pfam PF01594 Domain of unknown function DUF20 24 351 3.6E-42 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like RB2162 b55ec9294c56895eef2300187c947894 314 Gene3D G3DSA:1.10.510.10 152 275 3.0E-32 T 11-11-2016 RB2162 b55ec9294c56895eef2300187c947894 314 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 52 75 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB2162 b55ec9294c56895eef2300187c947894 314 Pfam PF00069 Protein kinase domain 46 237 1.8E-41 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2162 b55ec9294c56895eef2300187c947894 314 SUPERFAMILY SSF56112 43 281 5.72E-59 T 11-11-2016 IPR011009 Protein kinase-like domain RB2162 b55ec9294c56895eef2300187c947894 314 Gene3D G3DSA:3.30.200.20 38 151 2.9E-26 T 11-11-2016 RB2162 b55ec9294c56895eef2300187c947894 314 SMART SM00220 46 289 3.0E-47 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2162 b55ec9294c56895eef2300187c947894 314 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 162 174 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB12482 079346e18e310ac1385945d16295e96e 388 SUPERFAMILY SSF53474 102 375 1.49E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB12482 079346e18e310ac1385945d16295e96e 388 Pfam PF07859 alpha/beta hydrolase fold 155 366 1.5E-27 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB12482 079346e18e310ac1385945d16295e96e 388 Gene3D G3DSA:3.40.50.1820 147 385 1.1E-58 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2885 f52a3bc6ac33e92d4eda314f92fd7c8a 219 Pfam PF07884 Vitamin K epoxide reductase family 39 171 9.6E-19 T 11-11-2016 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 SUPERFAMILY SSF81799 144 246 1.83E-26 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 PIRSF PIRSF004486 22 325 8.8E-104 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 28 324 33.814 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 SUPERFAMILY SSF53335 246 324 3.5E-38 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 SUPERFAMILY SSF53335 28 143 3.5E-38 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 Gene3D G3DSA:3.40.50.150 249 324 2.6E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 Gene3D G3DSA:3.40.50.150 28 140 2.6E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 25 323 4.2E-77 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 Pfam PF01795 MraW methylase family 26 323 5.0E-83 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB8268 ffa46d1c85c7b8fce7ac2350e947510c 325 Gene3D G3DSA:1.10.150.170 143 248 6.9E-29 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RB12831 1ab56e86f5e387d553d94a5f7163a838 264 SUPERFAMILY SSF53448 8 213 1.38E-38 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB12831 1ab56e86f5e387d553d94a5f7163a838 264 Gene3D G3DSA:3.90.550.10 8 208 4.1E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB12831 1ab56e86f5e387d553d94a5f7163a838 264 Pfam PF00535 Glycosyl transferase family 2 8 170 1.7E-26 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB12597 337ca0daaa40b1c8d7a430778828df48 375 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 21 369 1.8E-133 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB12597 337ca0daaa40b1c8d7a430778828df48 375 Gene3D G3DSA:3.40.718.10 15 373 2.6E-129 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB12597 337ca0daaa40b1c8d7a430778828df48 375 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 259 278 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 RB12597 337ca0daaa40b1c8d7a430778828df48 375 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 19 373 48.704 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 RB12597 337ca0daaa40b1c8d7a430778828df48 375 SUPERFAMILY SSF53659 14 373 9.15E-120 T 11-11-2016 RB12597 337ca0daaa40b1c8d7a430778828df48 375 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 21 367 3.6E-149 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 RB12597 337ca0daaa40b1c8d7a430778828df48 375 SMART SM01329 20 369 1.5E-186 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB12559 0165abe6d06384d67bfd9d2d676e5628 405 Gene3D G3DSA:3.20.20.140 64 371 3.0E-80 T 11-11-2016 RB12559 0165abe6d06384d67bfd9d2d676e5628 405 SUPERFAMILY SSF51338 372 389 2.55E-15 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB12559 0165abe6d06384d67bfd9d2d676e5628 405 SUPERFAMILY SSF51338 5 63 2.55E-15 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB12559 0165abe6d06384d67bfd9d2d676e5628 405 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 8 398 7.8E-70 T 11-11-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RB12559 0165abe6d06384d67bfd9d2d676e5628 405 SUPERFAMILY SSF51556 63 372 4.92E-71 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB12559 0165abe6d06384d67bfd9d2d676e5628 405 Pfam PF01979 Amidohydrolase family 59 399 9.6E-27 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB12559 0165abe6d06384d67bfd9d2d676e5628 405 PIRSF PIRSF038994 8 405 1.4E-96 T 11-11-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RB12559 0165abe6d06384d67bfd9d2d676e5628 405 Gene3D G3DSA:2.30.40.10 372 387 6.3E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB12559 0165abe6d06384d67bfd9d2d676e5628 405 Gene3D G3DSA:2.30.40.10 10 63 6.3E-14 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RB3100 4dc43f896ce9ab60e89cc16a11d96a6e 208 Pfam PF07813 LTXXQ motif family protein 68 176 1.5E-6 T 11-11-2016 IPR012899 LTXXQ motif family protein GO:0042597 RB10245 a6cf04800d52d6ccd22a50cdcc6baf14 328 Pfam PF00561 alpha/beta hydrolase fold 63 306 1.4E-17 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB10245 a6cf04800d52d6ccd22a50cdcc6baf14 328 SUPERFAMILY SSF53474 26 321 1.16E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10245 a6cf04800d52d6ccd22a50cdcc6baf14 328 Gene3D G3DSA:3.40.50.1820 18 322 8.3E-61 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2496 a1f14562bcc9eafaa157fe0f004b8e88 237 SUPERFAMILY SSF52540 80 225 5.32E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2496 a1f14562bcc9eafaa157fe0f004b8e88 237 SUPERFAMILY SSF52540 3 45 5.32E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9518 26f1e829afb25fb7534f718d49829256 312 Pfam PF03983 SLA1 homology domain 1, SHD1 19 77 1.7E-5 T 11-11-2016 IPR007131 SLA1 homology domain 1, SHD1 GO:0008092|GO:0030674|GO:0042802|GO:0043130 RB9518 26f1e829afb25fb7534f718d49829256 312 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 16 122 8.0E-5 T 11-11-2016 RB7583 453696e11ee135be5d5e37f96c4dd5f7 280 Gene3D G3DSA:3.90.1550.10 10 137 3.2E-35 T 11-11-2016 RB7583 453696e11ee135be5d5e37f96c4dd5f7 280 Gene3D G3DSA:3.90.1550.10 177 213 3.2E-35 T 11-11-2016 RB7583 453696e11ee135be5d5e37f96c4dd5f7 280 Pfam PF03099 Biotin/lipoate A/B protein ligase family 75 211 7.0E-8 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RB7583 453696e11ee135be5d5e37f96c4dd5f7 280 SUPERFAMILY SSF55681 10 139 4.56E-44 T 11-11-2016 RB7583 453696e11ee135be5d5e37f96c4dd5f7 280 SUPERFAMILY SSF55681 169 279 4.56E-44 T 11-11-2016 RB5938 8973cc0b662f94a4eeeb3ba49cd90042 370 Pfam PF13432 Tetratricopeptide repeat 257 310 0.0019 T 11-11-2016 RB5938 8973cc0b662f94a4eeeb3ba49cd90042 370 SUPERFAMILY SSF48452 96 271 7.59E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5938 8973cc0b662f94a4eeeb3ba49cd90042 370 SUPERFAMILY SSF48452 239 347 1.14E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5938 8973cc0b662f94a4eeeb3ba49cd90042 370 Gene3D G3DSA:1.25.40.10 94 347 1.8E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13220 6ffceb2018aef76c1aed9bde33aefe06 270 SUPERFAMILY SSF54523 1 109 1.02E-10 T 11-11-2016 RB13220 6ffceb2018aef76c1aed9bde33aefe06 270 Pfam PF07596 Protein of unknown function (DUF1559) 17 259 1.4E-64 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB13220 6ffceb2018aef76c1aed9bde33aefe06 270 TIGRFAM TIGR04294 pre_pil_HX9DG: prepilin-type processing-associated H-X9-DG domain 236 251 1.5E-6 T 11-11-2016 IPR027558 Prepilin-type processing-associated H-X9-DG domain RB10172 c169b85726102db47b03ed43a7a78cad 489 Gene3D G3DSA:3.40.309.10 274 460 2.1E-75 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB10172 c169b85726102db47b03ed43a7a78cad 489 Gene3D G3DSA:3.40.605.10 15 273 2.5E-112 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB10172 c169b85726102db47b03ed43a7a78cad 489 Pfam PF00171 Aldehyde dehydrogenase family 24 485 1.9E-186 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB10172 c169b85726102db47b03ed43a7a78cad 489 SUPERFAMILY SSF53720 11 487 3.4E-180 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB10172 c169b85726102db47b03ed43a7a78cad 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RB10172 c169b85726102db47b03ed43a7a78cad 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RB2493 792e5284818f6ac16091e2423fb36300 444 Pfam PF13692 Glycosyl transferases group 1 263 399 2.2E-18 T 11-11-2016 RB2493 792e5284818f6ac16091e2423fb36300 444 Pfam PF13439 Glycosyltransferase Family 4 17 243 3.5E-12 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB2493 792e5284818f6ac16091e2423fb36300 444 Gene3D G3DSA:3.40.50.2000 258 410 5.2E-21 T 11-11-2016 RB2493 792e5284818f6ac16091e2423fb36300 444 SUPERFAMILY SSF53756 2 148 1.67E-51 T 11-11-2016 RB2493 792e5284818f6ac16091e2423fb36300 444 SUPERFAMILY SSF53756 193 411 1.67E-51 T 11-11-2016 RB7070 e4b111112f2bb4bf32977de76e1dd0a3 92 SUPERFAMILY SSF47789 20 82 6.93E-20 T 11-11-2016 RB7070 e4b111112f2bb4bf32977de76e1dd0a3 92 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 25 66 3.0E-17 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB7070 e4b111112f2bb4bf32977de76e1dd0a3 92 Gene3D G3DSA:1.10.150.20 20 80 6.4E-21 T 11-11-2016 RB7070 e4b111112f2bb4bf32977de76e1dd0a3 92 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 12 77 1.5E-21 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SUPERFAMILY SSF48452 1431 1509 2.9E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SUPERFAMILY SSF48452 1619 1728 2.9E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SUPERFAMILY SSF48452 1988 2012 2.9E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 902 935 33.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 176 209 45.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 461 494 44.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 803 836 440.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 353 386 77.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 664 697 54.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 595 628 6.2 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 1660 1693 2.4 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 698 731 100.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 319 352 58.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 105 138 68.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 427 460 2.9 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SMART SM00028 139 172 82.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SUPERFAMILY SSF48452 299 560 1.86E-20 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Pfam PF07622 Protein of unknown function (DUF1583) 3123 3263 2.8E-15 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Pfam PF13432 Tetratricopeptide repeat 111 171 1.2E-4 T 11-11-2016 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Pfam PF13432 Tetratricopeptide repeat 602 654 2.3E-5 T 11-11-2016 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Pfam PF13432 Tetratricopeptide repeat 442 485 4.9E-4 T 11-11-2016 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Pfam PF13432 Tetratricopeptide repeat 676 724 0.0042 T 11-11-2016 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Pfam PF13432 Tetratricopeptide repeat 324 387 4.3E-7 T 11-11-2016 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Pfam PF07619 Protein of unknown function (DUF1581) 2996 3059 8.1E-7 T 11-11-2016 IPR022660 Domain of unknown function DUF1581 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SUPERFAMILY SSF48452 573 869 4.16E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Gene3D G3DSA:1.25.40.10 916 964 2.1E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Gene3D G3DSA:1.25.40.10 588 867 3.7E-28 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Gene3D G3DSA:1.25.40.10 106 273 6.5E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Gene3D G3DSA:1.25.40.10 1594 1724 2.1E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Gene3D G3DSA:1.25.40.10 295 559 2.0E-32 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 Gene3D G3DSA:1.25.40.10 1433 1499 2.1E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7495 db679612540cdf9e1b8a1ec7082d862e 3273 SUPERFAMILY SSF48452 105 273 7.59E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12290 2af172991f1d5f7bd69f3ec2eaf9964a 453 Pfam PF02233 NAD(P) transhydrogenase beta subunit 9 449 9.8E-181 T 11-11-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RB12290 2af172991f1d5f7bd69f3ec2eaf9964a 453 PIRSF PIRSF000204 1 453 3.5E-174 T 11-11-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RB12290 2af172991f1d5f7bd69f3ec2eaf9964a 453 Gene3D G3DSA:3.40.50.1220 275 452 5.6E-84 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB12290 2af172991f1d5f7bd69f3ec2eaf9964a 453 SUPERFAMILY SSF52467 278 452 1.19E-71 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain RB1472 b1253717ac8c783a18461f26cf2423cd 508 SUPERFAMILY SSF75005 173 325 1.24E-12 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB1472 b1253717ac8c783a18461f26cf2423cd 508 SUPERFAMILY SSF75005 356 424 1.24E-12 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB1472 b1253717ac8c783a18461f26cf2423cd 508 Gene3D G3DSA:2.115.10.20 342 388 7.3E-7 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB1472 b1253717ac8c783a18461f26cf2423cd 508 Gene3D G3DSA:2.115.10.20 115 131 7.3E-7 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB1472 b1253717ac8c783a18461f26cf2423cd 508 Gene3D G3DSA:2.115.10.20 173 276 7.3E-7 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB1472 b1253717ac8c783a18461f26cf2423cd 508 Gene3D G3DSA:2.115.10.20 309 310 7.3E-7 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB12577 45901b02dad0c45eab9d3247094aef03 255 Gene3D G3DSA:2.40.50.140 198 255 8.5E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB12577 45901b02dad0c45eab9d3247094aef03 255 Gene3D G3DSA:2.40.50.140 135 197 1.3E-12 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB12577 45901b02dad0c45eab9d3247094aef03 255 SUPERFAMILY SSF50249 135 196 1.07E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB12577 45901b02dad0c45eab9d3247094aef03 255 SUPERFAMILY SSF50104 71 131 1.65E-6 T 11-11-2016 IPR008991 Translation protein SH3-like domain RB12577 45901b02dad0c45eab9d3247094aef03 255 SMART SM00841 199 254 2.4E-30 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RB12577 45901b02dad0c45eab9d3247094aef03 255 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 71 128 2.8E-9 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like RB12577 45901b02dad0c45eab9d3247094aef03 255 SUPERFAMILY SSF50249 198 255 1.15E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB12577 45901b02dad0c45eab9d3247094aef03 255 ProSitePatterns PS01275 Elongation factor P signature. 220 239 - T 11-11-2016 IPR013852 Translation elongation factor P/YeiP, conserved site RB12577 45901b02dad0c45eab9d3247094aef03 255 Pfam PF09285 Elongation factor P, C-terminal 199 254 2.6E-21 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RB12577 45901b02dad0c45eab9d3247094aef03 255 SMART SM01185 136 191 1.2E-10 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RB12577 45901b02dad0c45eab9d3247094aef03 255 Pfam PF01132 Elongation factor P (EF-P) OB domain 137 189 5.0E-13 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RB12577 45901b02dad0c45eab9d3247094aef03 255 Gene3D G3DSA:2.30.30.30 71 132 3.5E-8 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 RB11418 1c2600188f5f1fb6028ef2647024884b 103 SUPERFAMILY SSF51182 6 100 5.94E-9 T 11-11-2016 IPR011051 RmlC-like cupin domain RB11418 1c2600188f5f1fb6028ef2647024884b 103 Gene3D G3DSA:2.60.120.10 4 99 3.4E-8 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB1299 19e74ff141bc7dffbb434a36f5518c80 75 Gene3D G3DSA:3.40.50.880 16 64 2.1E-7 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB1299 19e74ff141bc7dffbb434a36f5518c80 75 SUPERFAMILY SSF52317 19 63 2.93E-6 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB1621 df29e6fb0a38d34735f00fd789369013 350 SUPERFAMILY SSF48317 36 228 8.11E-18 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB1621 df29e6fb0a38d34735f00fd789369013 350 Gene3D G3DSA:1.20.144.10 49 229 4.7E-19 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB1621 df29e6fb0a38d34735f00fd789369013 350 Pfam PF01569 PAP2 superfamily 110 229 3.4E-14 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB9624 0a19b7d375221bad21d65261474b6f2d 357 Gene3D G3DSA:3.40.50.300 163 219 1.1E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9624 0a19b7d375221bad21d65261474b6f2d 357 SUPERFAMILY SSF53795 163 209 2.87E-6 T 11-11-2016 RB5119 4600a1271f57d423bc2025282b95f14a 1041 Gene3D G3DSA:1.25.40.10 373 405 7.0E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5119 4600a1271f57d423bc2025282b95f14a 1041 Gene3D G3DSA:1.25.40.10 63 131 7.0E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6566 2115fa48ddace4ca49d6cdadd36a4285 329 Pfam PF00781 Diacylglycerol kinase catalytic domain 15 133 3.9E-11 T 11-11-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RB6566 2115fa48ddace4ca49d6cdadd36a4285 329 SUPERFAMILY SSF111331 216 328 2.62E-49 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RB6566 2115fa48ddace4ca49d6cdadd36a4285 329 SUPERFAMILY SSF111331 13 188 2.62E-49 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RB11615 51aa0f9b672ec96f429264c0202a45c3 395 Gene3D G3DSA:1.10.443.10 320 382 2.4E-23 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB11615 51aa0f9b672ec96f429264c0202a45c3 395 Gene3D G3DSA:1.10.443.10 198 286 2.4E-23 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB11615 51aa0f9b672ec96f429264c0202a45c3 395 Pfam PF00589 Phage integrase family 211 383 7.6E-12 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB11615 51aa0f9b672ec96f429264c0202a45c3 395 SUPERFAMILY SSF56349 315 385 6.83E-32 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB11615 51aa0f9b672ec96f429264c0202a45c3 395 SUPERFAMILY SSF56349 79 279 6.83E-32 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB8002 dfe26c8ec8bd4120583103ebe5cfa6ca 485 SUPERFAMILY SSF53649 28 473 1.6E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8002 dfe26c8ec8bd4120583103ebe5cfa6ca 485 Gene3D G3DSA:3.40.720.10 27 398 5.3E-111 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8002 dfe26c8ec8bd4120583103ebe5cfa6ca 485 Gene3D G3DSA:3.30.1120.10 399 472 1.8E-14 T 11-11-2016 RB8002 dfe26c8ec8bd4120583103ebe5cfa6ca 485 Pfam PF00884 Sulfatase 30 384 2.9E-73 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB12926 90dba06ba6e3177ec7dafa361c73abbd 163 Pfam PF12975 Domain of unknown function (DUF3859) 32 153 2.9E-45 T 11-11-2016 IPR024331 Domain of unknown function DUF3859 RB11084 2d9c0c2a801b01f562d27dbba2cb2220 964 Gene3D G3DSA:1.25.40.10 715 894 2.7E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11084 2d9c0c2a801b01f562d27dbba2cb2220 964 Gene3D G3DSA:1.10.710.10 227 445 5.5E-18 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB11084 2d9c0c2a801b01f562d27dbba2cb2220 964 Pfam PF13435 Cytochrome c554 and c-prime 232 319 1.1E-5 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB11084 2d9c0c2a801b01f562d27dbba2cb2220 964 SUPERFAMILY SSF48695 227 319 2.1E-22 T 11-11-2016 IPR011031 Multihaem cytochrome RB11084 2d9c0c2a801b01f562d27dbba2cb2220 964 SUPERFAMILY SSF48695 361 437 2.1E-22 T 11-11-2016 IPR011031 Multihaem cytochrome RB11084 2d9c0c2a801b01f562d27dbba2cb2220 964 SUPERFAMILY SSF48452 748 893 1.44E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB395 26900f74fc3c4f518bf15f99900c2fb1 833 Pfam PF07626 Protein of unknown function (DUF1587) 140 204 1.7E-22 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB395 26900f74fc3c4f518bf15f99900c2fb1 833 Pfam PF07627 Protein of unknown function (DUF1588) 626 722 2.1E-30 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB395 26900f74fc3c4f518bf15f99900c2fb1 833 Pfam PF07635 Planctomycete cytochrome C 60 107 2.3E-8 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB395 26900f74fc3c4f518bf15f99900c2fb1 833 Pfam PF07637 Protein of unknown function (DUF1595) 415 474 2.2E-17 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB395 26900f74fc3c4f518bf15f99900c2fb1 833 Pfam PF07631 Protein of unknown function (DUF1592) 479 607 1.3E-39 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB395 26900f74fc3c4f518bf15f99900c2fb1 833 Pfam PF07624 Protein of unknown function (DUF1585) 757 830 3.2E-20 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB7215 df4c3053808917e9b1de334d6ff5ca66 310 Gene3D G3DSA:3.40.190.10 3 145 3.1E-37 T 11-11-2016 RB7215 df4c3053808917e9b1de334d6ff5ca66 310 SUPERFAMILY SSF53850 3 279 7.69E-70 T 11-11-2016 RB7215 df4c3053808917e9b1de334d6ff5ca66 310 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 265 8.3E-80 T 11-11-2016 IPR011862 Phosphate binding protein GO:0006810 RB7215 df4c3053808917e9b1de334d6ff5ca66 310 Pfam PF12849 PBP superfamily domain 2 251 2.8E-33 T 11-11-2016 IPR024370 PBP domain RB11255 bda42d8a7ef6c7bb25d233f711b6b19d 320 Pfam PF01148 Cytidylyltransferase family 39 318 2.2E-49 T 11-11-2016 RB11009 424d112793cf6530dbfb97e957eaf647 238 PRINTS PR00369 Flavodoxin signature 140 151 8.9E-11 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RB11009 424d112793cf6530dbfb97e957eaf647 238 PRINTS PR00369 Flavodoxin signature 171 181 8.9E-11 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RB11009 424d112793cf6530dbfb97e957eaf647 238 PRINTS PR00369 Flavodoxin signature 92 105 8.9E-11 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RB11009 424d112793cf6530dbfb97e957eaf647 238 PRINTS PR00369 Flavodoxin signature 195 214 8.9E-11 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RB11009 424d112793cf6530dbfb97e957eaf647 238 SUPERFAMILY SSF52218 90 225 2.37E-38 T 11-11-2016 IPR029039 Flavoprotein-like domain RB11009 424d112793cf6530dbfb97e957eaf647 238 Gene3D G3DSA:3.40.50.360 87 225 1.7E-37 T 11-11-2016 IPR029039 Flavoprotein-like domain RB11009 424d112793cf6530dbfb97e957eaf647 238 Pfam PF00258 Flavodoxin 93 216 2.9E-26 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RB144 c2f1172121d5928208e4866cae52567b 467 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 239 436 8.6E-19 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB144 c2f1172121d5928208e4866cae52567b 467 SUPERFAMILY SSF111369 245 442 2.09E-10 T 11-11-2016 RB144 c2f1172121d5928208e4866cae52567b 467 Gene3D G3DSA:2.40.50.100 328 362 9.7E-10 T 11-11-2016 RB144 c2f1172121d5928208e4866cae52567b 467 Gene3D G3DSA:2.40.50.100 244 272 9.7E-10 T 11-11-2016 RB8437 b7c3b1b7a69ae869d07ed339b5ce42e9 1021 Pfam PF07635 Planctomycete cytochrome C 55 111 3.1E-19 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB8437 b7c3b1b7a69ae869d07ed339b5ce42e9 1021 Pfam PF07587 Protein of unknown function (DUF1553) 709 958 4.4E-90 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB8437 b7c3b1b7a69ae869d07ed339b5ce42e9 1021 Gene3D G3DSA:1.10.760.10 53 135 8.0E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8437 b7c3b1b7a69ae869d07ed339b5ce42e9 1021 Gene3D G3DSA:1.10.760.10 320 346 8.0E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8437 b7c3b1b7a69ae869d07ed339b5ce42e9 1021 Pfam PF07583 Protein of unknown function (DUF1549) 161 366 1.8E-85 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB8437 b7c3b1b7a69ae869d07ed339b5ce42e9 1021 SUPERFAMILY SSF46626 45 135 5.91E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB339 dbee70727815e5a75e00547aa052f090 99 Pfam PF01910 Thiamine-binding protein 5 94 2.8E-35 T 11-11-2016 IPR002767 Thiamine-binding protein RB339 dbee70727815e5a75e00547aa052f090 99 Gene3D G3DSA:3.30.70.930 1 96 1.7E-41 T 11-11-2016 IPR029756 MTH1187/YkoF-like RB339 dbee70727815e5a75e00547aa052f090 99 SUPERFAMILY SSF89957 1 96 3.27E-36 T 11-11-2016 IPR029756 MTH1187/YkoF-like RB339 dbee70727815e5a75e00547aa052f090 99 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 3 97 8.7E-39 T 11-11-2016 IPR002767 Thiamine-binding protein RB5696 1db46f0a512591f61b004773f29e5ccb 275 Gene3D G3DSA:3.40.190.80 160 269 4.2E-33 T 11-11-2016 RB5696 1db46f0a512591f61b004773f29e5ccb 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 91 104 - T 11-11-2016 IPR020583 Inositol monophosphatase, metal-binding site RB5696 1db46f0a512591f61b004773f29e5ccb 275 Gene3D G3DSA:3.30.540.10 9 159 2.2E-47 T 11-11-2016 RB5696 1db46f0a512591f61b004773f29e5ccb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 3.4E-45 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB5696 1db46f0a512591f61b004773f29e5ccb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 140 163 3.4E-45 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB5696 1db46f0a512591f61b004773f29e5ccb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 3.4E-45 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB5696 1db46f0a512591f61b004773f29e5ccb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 3.4E-45 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB5696 1db46f0a512591f61b004773f29e5ccb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 3.4E-45 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB5696 1db46f0a512591f61b004773f29e5ccb 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 188 209 3.4E-45 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB5696 1db46f0a512591f61b004773f29e5ccb 275 Pfam PF00459 Inositol monophosphatase family 9 262 1.2E-61 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 RB5696 1db46f0a512591f61b004773f29e5ccb 275 SUPERFAMILY SSF56655 9 267 3.93E-75 T 11-11-2016 RB7371 6735df57cb12e309fe3e849af81dae6a 689 Pfam PF13180 PDZ domain 384 453 1.3E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7371 6735df57cb12e309fe3e849af81dae6a 689 Pfam PF13180 PDZ domain 283 345 3.9E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7371 6735df57cb12e309fe3e849af81dae6a 689 Gene3D G3DSA:2.30.42.10 389 455 7.0E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7371 6735df57cb12e309fe3e849af81dae6a 689 Pfam PF13365 Trypsin-like peptidase domain 90 223 4.0E-20 T 11-11-2016 RB7371 6735df57cb12e309fe3e849af81dae6a 689 Gene3D G3DSA:2.40.10.10 160 270 3.3E-15 T 11-11-2016 RB7371 6735df57cb12e309fe3e849af81dae6a 689 SMART SM00228 269 342 4.8E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7371 6735df57cb12e309fe3e849af81dae6a 689 SMART SM00228 360 446 0.73 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7371 6735df57cb12e309fe3e849af81dae6a 689 SUPERFAMILY SSF50156 388 461 1.31E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7371 6735df57cb12e309fe3e849af81dae6a 689 PRINTS PR00834 HtrA/DegQ protease family signature 300 312 1.7E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7371 6735df57cb12e309fe3e849af81dae6a 689 PRINTS PR00834 HtrA/DegQ protease family signature 98 110 1.7E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7371 6735df57cb12e309fe3e849af81dae6a 689 PRINTS PR00834 HtrA/DegQ protease family signature 120 140 1.7E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7371 6735df57cb12e309fe3e849af81dae6a 689 PRINTS PR00834 HtrA/DegQ protease family signature 194 211 1.7E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7371 6735df57cb12e309fe3e849af81dae6a 689 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 1.7E-11 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB7371 6735df57cb12e309fe3e849af81dae6a 689 Gene3D G3DSA:2.40.10.10 54 156 1.8E-17 T 11-11-2016 RB7371 6735df57cb12e309fe3e849af81dae6a 689 SUPERFAMILY SSF50156 260 346 7.89E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB7371 6735df57cb12e309fe3e849af81dae6a 689 SUPERFAMILY SSF50494 57 263 1.91E-31 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB7371 6735df57cb12e309fe3e849af81dae6a 689 Gene3D G3DSA:2.30.42.10 271 350 6.3E-15 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB6170 02ec496272a98ff35a948aa3bfb286c5 184 Pfam PF09951 Protein of unknown function (DUF2185) 91 171 1.4E-32 T 11-11-2016 IPR018689 Domain of unknown function DUF2185 RB2532 7d9fe5fe2b8a1e9bea3be647842d49a0 251 SUPERFAMILY SSF100950 8 248 3.07E-90 T 11-11-2016 RB2532 7d9fe5fe2b8a1e9bea3be647842d49a0 251 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 7 247 41.345 T 11-11-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RB2532 7d9fe5fe2b8a1e9bea3be647842d49a0 251 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 126 144 - T 11-11-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RB2532 7d9fe5fe2b8a1e9bea3be647842d49a0 251 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 13 248 4.7E-83 T 11-11-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RB2532 7d9fe5fe2b8a1e9bea3be647842d49a0 251 Gene3D G3DSA:3.40.50.1360 8 247 9.6E-95 T 11-11-2016 RB2532 7d9fe5fe2b8a1e9bea3be647842d49a0 251 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 17 233 1.6E-21 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RB6850 285474842e3978b3563a5e8f289a2ec8 478 SUPERFAMILY SSF54523 80 236 3.77E-29 T 11-11-2016 RB6850 285474842e3978b3563a5e8f289a2ec8 478 Gene3D G3DSA:3.30.700.10 80 139 9.7E-7 T 11-11-2016 RB6850 285474842e3978b3563a5e8f289a2ec8 478 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 78 98 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6850 285474842e3978b3563a5e8f289a2ec8 478 Pfam PF07596 Protein of unknown function (DUF1559) 104 433 1.7E-75 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB6850 285474842e3978b3563a5e8f289a2ec8 478 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 77 99 4.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6850 285474842e3978b3563a5e8f289a2ec8 478 Pfam PF13633 Prokaryotic N-terminal methylation site 77 103 3.0E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1395 856d90a38f2e5554f0aa93ad6a9dd591 319 SUPERFAMILY SSF46955 31 80 1.53E-7 T 11-11-2016 IPR009061 Putative DNA-binding domain RB1395 856d90a38f2e5554f0aa93ad6a9dd591 319 Gene3D G3DSA:3.40.50.280 197 306 3.4E-11 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RB1395 856d90a38f2e5554f0aa93ad6a9dd591 319 SUPERFAMILY SSF52242 191 315 2.04E-16 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RB1395 856d90a38f2e5554f0aa93ad6a9dd591 319 Pfam PF12728 Helix-turn-helix domain 32 78 3.4E-8 T 11-11-2016 RB1395 856d90a38f2e5554f0aa93ad6a9dd591 319 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 31 79 3.8E-9 T 11-11-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RB2894 a313812743770602ffa27ca3e5af9c76 168 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 150 4.5E-21 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RB5177 171cc6477f44f715359ec20365615675 571 SUPERFAMILY SSF56317 330 540 8.76E-18 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5177 171cc6477f44f715359ec20365615675 571 SUPERFAMILY SSF56317 257 287 8.76E-18 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5177 171cc6477f44f715359ec20365615675 571 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 546 16.07 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 RB5177 171cc6477f44f715359ec20365615675 571 Pfam PF00795 Carbon-nitrogen hydrolase 257 524 3.7E-9 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5177 171cc6477f44f715359ec20365615675 571 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 55 508 3.9E-44 T 11-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 RB5177 171cc6477f44f715359ec20365615675 571 Gene3D G3DSA:3.60.110.10 265 524 7.4E-12 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB2125 881c73eff187c7577e4871686cd0d18b 228 SUPERFAMILY SSF49899 94 201 1.69E-6 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2125 881c73eff187c7577e4871686cd0d18b 228 Gene3D G3DSA:2.60.120.260 30 83 6.0E-4 T 11-11-2016 IPR008979 Galactose-binding domain-like RB198 070e95db94639f2a77fa53a79fad0300 608 Gene3D G3DSA:3.40.720.10 30 389 2.9E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB198 070e95db94639f2a77fa53a79fad0300 608 Pfam PF00884 Sulfatase 32 339 4.5E-64 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB198 070e95db94639f2a77fa53a79fad0300 608 SUPERFAMILY SSF53649 30 435 9.74E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB198 070e95db94639f2a77fa53a79fad0300 608 ProSitePatterns PS00523 Sulfatases signature 1. 77 89 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB198 070e95db94639f2a77fa53a79fad0300 608 Gene3D G3DSA:3.30.1120.10 390 438 7.8E-13 T 11-11-2016 RB3607 057839fc0722af37e6a524b94e3bd9c7 197 SUPERFAMILY SSF52833 52 171 3.62E-8 T 11-11-2016 IPR012336 Thioredoxin-like fold RB3607 057839fc0722af37e6a524b94e3bd9c7 197 Gene3D G3DSA:3.40.30.10 47 143 2.6E-4 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4272 a6122fe02f14c6751e307fc255bc3eeb 441 Gene3D G3DSA:2.30.42.10 57 127 3.1E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB4272 a6122fe02f14c6751e307fc255bc3eeb 441 SUPERFAMILY SSF50156 43 130 2.8E-5 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB2556 8a7ffd5e1e418274f44fe7d3e230b399 60 Pfam PF07644 Planctomycete PGAMP 2 35 5.3E-17 T 11-11-2016 IPR011503 Planctomycete PGAMP RB11663 79b5358269ebac8d2d1f9887d9bf8c74 450 SUPERFAMILY SSF103473 13 442 3.66E-40 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB11663 79b5358269ebac8d2d1f9887d9bf8c74 450 Pfam PF07690 Major Facilitator Superfamily 48 395 9.8E-21 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB11663 79b5358269ebac8d2d1f9887d9bf8c74 450 Gene3D G3DSA:1.20.1250.20 39 223 3.3E-21 T 11-11-2016 RB9983 31d66cb49a3c5ab2e1da28e3970e7d2e 326 Gene3D G3DSA:2.60.120.10 245 316 1.2E-8 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB9983 31d66cb49a3c5ab2e1da28e3970e7d2e 326 Pfam PF01238 Phosphomannose isomerase type I 8 114 3.1E-11 T 11-11-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RB9983 31d66cb49a3c5ab2e1da28e3970e7d2e 326 Gene3D G3DSA:2.60.120.10 2 226 3.8E-62 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB9983 31d66cb49a3c5ab2e1da28e3970e7d2e 326 SUPERFAMILY SSF51182 4 307 2.66E-78 T 11-11-2016 IPR011051 RmlC-like cupin domain RB9983 31d66cb49a3c5ab2e1da28e3970e7d2e 326 PIRSF PIRSF036894 3 321 9.9E-82 T 11-11-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 RB6493 e5ab0e39f91f1bf5a868c2a71ab551cd 128 Gene3D G3DSA:3.30.1310.10 6 115 4.9E-18 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RB6493 e5ab0e39f91f1bf5a868c2a71ab551cd 128 Pfam PF02575 YbaB/EbfC DNA-binding family 17 109 3.1E-17 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RB6493 e5ab0e39f91f1bf5a868c2a71ab551cd 128 SUPERFAMILY SSF82607 17 115 4.45E-16 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RB6493 e5ab0e39f91f1bf5a868c2a71ab551cd 128 PIRSF PIRSF004555 7 120 4.8E-15 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RB7501 2d15bb7bd1cf04404d52ceeb89e227d2 300 Pfam PF01882 Protein of unknown function DUF58 39 129 9.1E-16 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB7501 2d15bb7bd1cf04404d52ceeb89e227d2 300 SUPERFAMILY SSF53300 79 221 6.85E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7501 2d15bb7bd1cf04404d52ceeb89e227d2 300 Gene3D G3DSA:3.40.50.410 77 177 1.8E-5 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7501 2d15bb7bd1cf04404d52ceeb89e227d2 300 SMART SM00327 78 249 0.004 T 11-11-2016 IPR002035 von Willebrand factor, type A RB10934 589af2790152a65c80b224951e88d68a 68 Pfam PF05532 CsbD-like 5 57 3.3E-20 T 11-11-2016 IPR008462 CsbD-like RB10934 589af2790152a65c80b224951e88d68a 68 PIRSF PIRSF039008 2 67 8.4E-34 T 11-11-2016 IPR026042 Stress response protein YjbJ RB10934 589af2790152a65c80b224951e88d68a 68 Gene3D G3DSA:1.10.1470.10 2 67 8.8E-31 T 11-11-2016 IPR008462 CsbD-like RB10934 589af2790152a65c80b224951e88d68a 68 SUPERFAMILY SSF69047 2 67 1.44E-27 T 11-11-2016 IPR008462 CsbD-like RB12068 48fdd0ef1cb3505be8951c07a4eb48c3 553 Pfam PF13570 PQQ-like domain 163 189 0.0021 T 11-11-2016 IPR025666 Pyrrolo-quinoline quinone-like domain RB12068 48fdd0ef1cb3505be8951c07a4eb48c3 553 Gene3D G3DSA:2.140.10.10 116 189 8.7E-69 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB12068 48fdd0ef1cb3505be8951c07a4eb48c3 553 Gene3D G3DSA:2.140.10.10 223 552 8.7E-69 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB12068 48fdd0ef1cb3505be8951c07a4eb48c3 553 SUPERFAMILY SSF50998 225 550 8.75E-62 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB12068 48fdd0ef1cb3505be8951c07a4eb48c3 553 SUPERFAMILY SSF50998 130 191 8.75E-62 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB12068 48fdd0ef1cb3505be8951c07a4eb48c3 553 Pfam PF13360 PQQ-like domain 228 481 7.8E-21 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 SUPERFAMILY SSF52821 236 346 2.36E-16 T 11-11-2016 IPR001763 Rhodanese-like domain RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 Gene3D G3DSA:3.40.250.10 268 347 3.9E-13 T 11-11-2016 IPR001763 Rhodanese-like domain RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 SUPERFAMILY SSF52821 369 466 6.68E-30 T 11-11-2016 IPR001763 Rhodanese-like domain RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 Pfam PF00581 Rhodanese-like domain 371 460 1.8E-16 T 11-11-2016 IPR001763 Rhodanese-like domain RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 Pfam PF00581 Rhodanese-like domain 275 346 1.3E-4 T 11-11-2016 IPR001763 Rhodanese-like domain RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 ProSitePatterns PS00380 Rhodanese signature 1. 293 304 - T 11-11-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 Gene3D G3DSA:3.40.250.10 358 468 1.6E-30 T 11-11-2016 IPR001763 Rhodanese-like domain RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 Pfam PF00753 Metallo-beta-lactamase superfamily 13 186 3.4E-15 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 SUPERFAMILY SSF56281 10 259 2.38E-52 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 Gene3D G3DSA:3.60.15.10 6 257 8.9E-59 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 SMART SM00849 12 196 1.2E-29 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 SMART SM00450 369 464 8.6E-28 T 11-11-2016 IPR001763 Rhodanese-like domain RB11227 cbc13d3f7a4c113f103e7ce1486582cc 474 SMART SM00450 268 360 0.063 T 11-11-2016 IPR001763 Rhodanese-like domain RB498 397353bbfe1fe16a5b9647e89f6e13bd 373 Pfam PF01882 Protein of unknown function DUF58 109 192 4.6E-21 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB498 397353bbfe1fe16a5b9647e89f6e13bd 373 SUPERFAMILY SSF53300 143 290 7.56E-17 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4015 0ec7534720df18eb800e13f35a32e9d3 236 SUPERFAMILY SSF49899 168 234 1.06E-6 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB4015 0ec7534720df18eb800e13f35a32e9d3 236 Gene3D G3DSA:2.60.120.200 156 203 2.3E-5 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB4015 0ec7534720df18eb800e13f35a32e9d3 236 Pfam PF06439 Domain of Unknown Function (DUF1080) 45 206 3.7E-8 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB6713 29fe5ad15b8abc42f9bd7ceab35ba4b1 315 SUPERFAMILY SSF52402 35 161 3.85E-7 T 11-11-2016 RB6713 29fe5ad15b8abc42f9bd7ceab35ba4b1 315 Gene3D G3DSA:3.40.50.620 34 159 3.9E-4 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB2651 f3eb1a7c1bad955f53c462c82a3c88ad 795 Pfam PF13533 Biotin-lipoyl like 484 523 7.7E-6 T 11-11-2016 RB2651 f3eb1a7c1bad955f53c462c82a3c88ad 795 SUPERFAMILY SSF111369 474 581 2.62E-5 T 11-11-2016 RB2651 f3eb1a7c1bad955f53c462c82a3c88ad 795 Gene3D G3DSA:2.40.50.100 478 509 3.3E-8 T 11-11-2016 RB2651 f3eb1a7c1bad955f53c462c82a3c88ad 795 Gene3D G3DSA:2.40.50.100 570 583 3.3E-8 T 11-11-2016 RB4681 cd8e6a51c9cc9b1dac1edf795d1cbd5a 65 SMART SM00357 3 65 9.4E-12 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 RB4681 cd8e6a51c9cc9b1dac1edf795d1cbd5a 65 Gene3D G3DSA:2.40.50.140 1 64 7.2E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB4681 cd8e6a51c9cc9b1dac1edf795d1cbd5a 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 11-11-2016 IPR019844 Cold-shock conserved site RB4681 cd8e6a51c9cc9b1dac1edf795d1cbd5a 65 SUPERFAMILY SSF50249 1 64 7.83E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB4681 cd8e6a51c9cc9b1dac1edf795d1cbd5a 65 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 7.9E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RB4681 cd8e6a51c9cc9b1dac1edf795d1cbd5a 65 PIRSF PIRSF002599 1 65 1.5E-14 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 SMART SM00322 210 277 6.6E-11 T 11-11-2016 IPR004087 K Homology domain GO:0003676 RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 Pfam PF00013 KH domain 215 269 1.9E-7 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 Hamap MF_00335 Ribonuclease Y [rny]. 7 522 22.543 T 11-11-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 SUPERFAMILY SSF54791 209 305 2.48E-16 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 10 522 8.2E-208 T 11-11-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 Gene3D G3DSA:3.30.1370.10 222 297 1.4E-6 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 TIGRFAM TIGR00277 HDIG: HDIG domain 334 410 2.8E-22 T 11-11-2016 IPR006675 HDIG domain RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 Pfam PF01966 HD domain 339 430 1.1E-17 T 11-11-2016 IPR006674 HD domain RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 Gene3D G3DSA:1.10.3210.10 321 495 5.7E-35 T 11-11-2016 IPR006674 HD domain RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 Pfam PF12072 Domain of unknown function (DUF3552) 9 205 6.9E-31 T 11-11-2016 IPR022711 Ribonuclease Y, N-terminal RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 SUPERFAMILY SSF109604 313 453 3.81E-25 T 11-11-2016 RB7627 9cfaa68d3b677d77a821b6f5581921ab 522 SMART SM00471 334 440 2.0E-13 T 11-11-2016 IPR003607 HD/PDEase domain RB4517 dcb74c3ab05b56a65316f6ac00d568d1 117 Gene3D G3DSA:3.30.1360.20 18 116 6.5E-26 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RB4517 dcb74c3ab05b56a65316f6ac00d568d1 117 SUPERFAMILY SSF55248 23 116 8.5E-26 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RB4517 dcb74c3ab05b56a65316f6ac00d568d1 117 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 25 114 4.2E-24 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RB4651 875c5af05b0ea4bd9d7a37ce2e0d2414 287 Hamap MF_00443 Thiazole synthase [thiG]. 10 274 41.823 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 RB4651 875c5af05b0ea4bd9d7a37ce2e0d2414 287 Gene3D G3DSA:3.20.20.70 10 271 7.9E-53 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB4651 875c5af05b0ea4bd9d7a37ce2e0d2414 287 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 268 1.1E-97 T 11-11-2016 RB4651 875c5af05b0ea4bd9d7a37ce2e0d2414 287 SUPERFAMILY SSF110399 10 260 4.84E-79 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 RB13237 98cc197d592559a3c9498b688d20cb82 388 SMART SM00327 176 383 3.0E-23 T 11-11-2016 IPR002035 von Willebrand factor, type A RB13237 98cc197d592559a3c9498b688d20cb82 388 Pfam PF00092 von Willebrand factor type A domain 178 375 1.0E-17 T 11-11-2016 IPR002035 von Willebrand factor, type A RB13237 98cc197d592559a3c9498b688d20cb82 388 Gene3D G3DSA:3.40.50.410 174 381 3.7E-25 T 11-11-2016 IPR002035 von Willebrand factor, type A RB13237 98cc197d592559a3c9498b688d20cb82 388 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 35 79 1.1E-5 T 11-11-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal RB13237 98cc197d592559a3c9498b688d20cb82 388 SUPERFAMILY SSF53300 217 382 3.56E-33 T 11-11-2016 IPR002035 von Willebrand factor, type A RB13237 98cc197d592559a3c9498b688d20cb82 388 SUPERFAMILY SSF53300 151 189 3.56E-33 T 11-11-2016 IPR002035 von Willebrand factor, type A RB11845 1872229bcc27d811e00b6f677cdd0c61 86 Pfam PF07628 Protein of unknown function (DUF1589) 35 78 1.9E-15 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 Pfam PF01847 von Hippel-Lindau disease tumour suppressor protein 134 186 2.6E-4 T 11-11-2016 IPR022772 von Hippel-Lindau disease tumour suppressor, beta/alpha domain RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 SUPERFAMILY SSF82171 227 565 6.8E-28 T 11-11-2016 RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 Gene3D G3DSA:3.40.50.1820 578 825 5.2E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 Gene3D G3DSA:2.60.40.780 134 213 1.6E-16 T 11-11-2016 IPR024053 von Hippel-Lindau disease tumour suppressor, beta domain RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 Gene3D G3DSA:2.140.10.30 298 568 1.6E-39 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 SUPERFAMILY SSF53474 578 813 3.31E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 SUPERFAMILY SSF49468 129 257 2.62E-29 T 11-11-2016 IPR022772 von Hippel-Lindau disease tumour suppressor, beta/alpha domain RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 Pfam PF05960 Bacterial protein of unknown function (DUF885) 873 1500 2.5E-59 T 11-11-2016 IPR010281 Protein of unknown function DUF885 RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 Pfam PF00326 Prolyl oligopeptidase family 634 826 7.2E-55 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB2081 70d3fc977f372f8a73257fdacad1e4ee 1517 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 300 545 1.1E-29 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 RB5486 d8222bf0197d7c0922956e14176790a5 402 SUPERFAMILY SSF50978 104 387 6.77E-29 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB5486 d8222bf0197d7c0922956e14176790a5 402 Gene3D G3DSA:2.130.10.10 110 172 5.7E-29 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB5486 d8222bf0197d7c0922956e14176790a5 402 Gene3D G3DSA:2.130.10.10 213 386 5.7E-29 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB5486 d8222bf0197d7c0922956e14176790a5 402 SMART SM00320 261 300 0.028 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5486 d8222bf0197d7c0922956e14176790a5 402 SMART SM00320 306 341 130.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5486 d8222bf0197d7c0922956e14176790a5 402 SMART SM00320 94 132 190.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5486 d8222bf0197d7c0922956e14176790a5 402 SMART SM00320 344 381 0.37 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB5486 d8222bf0197d7c0922956e14176790a5 402 SMART SM00320 135 173 11.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB10436 a9aeabe6f08db741d48261b9f1adaadc 399 SUPERFAMILY SSF53756 13 376 1.57E-55 T 11-11-2016 RB10436 a9aeabe6f08db741d48261b9f1adaadc 399 Pfam PF00534 Glycosyl transferases group 1 212 347 8.3E-28 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB10436 a9aeabe6f08db741d48261b9f1adaadc 399 Gene3D G3DSA:3.40.50.2000 215 341 4.7E-25 T 11-11-2016 RB4386 36ca467c66b1cbd8374874f8b7cab127 349 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 20 321 1.9E-111 T 11-11-2016 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA RB4386 36ca467c66b1cbd8374874f8b7cab127 349 SUPERFAMILY SSF53686 15 323 7.99E-73 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB4386 36ca467c66b1cbd8374874f8b7cab127 349 Gene3D G3DSA:3.40.50.1100 14 54 3.1E-45 T 11-11-2016 RB4386 36ca467c66b1cbd8374874f8b7cab127 349 Gene3D G3DSA:3.40.50.1100 165 323 3.1E-45 T 11-11-2016 RB4386 36ca467c66b1cbd8374874f8b7cab127 349 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 305 1.9E-53 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB4386 36ca467c66b1cbd8374874f8b7cab127 349 Gene3D G3DSA:3.40.50.1100 55 159 6.1E-27 T 11-11-2016 RB4386 36ca467c66b1cbd8374874f8b7cab127 349 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 45 63 - T 11-11-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RB3176 1b567c93bbecc60d0a6de18a79786efc 395 Pfam PF00155 Aminotransferase class I and II 40 376 2.7E-49 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RB3176 1b567c93bbecc60d0a6de18a79786efc 395 Gene3D G3DSA:3.90.1150.10 271 381 8.1E-22 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB3176 1b567c93bbecc60d0a6de18a79786efc 395 Gene3D G3DSA:3.40.640.10 68 270 8.2E-78 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB3176 1b567c93bbecc60d0a6de18a79786efc 395 SUPERFAMILY SSF53383 9 383 1.06E-89 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB3176 1b567c93bbecc60d0a6de18a79786efc 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 234 243 - T 11-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RB4867 adba1e2a7ff519453454278ab0468566 210 SUPERFAMILY SSF74982 59 190 7.98E-44 T 11-11-2016 IPR023620 Small protein B RB4867 adba1e2a7ff519453454278ab0468566 210 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 66 190 1.0E-69 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 RB4867 adba1e2a7ff519453454278ab0468566 210 TIGRFAM TIGR00086 smpB: SsrA-binding protein 66 208 1.3E-57 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 RB4867 adba1e2a7ff519453454278ab0468566 210 Gene3D G3DSA:2.40.280.10 66 185 3.2E-43 T 11-11-2016 IPR023620 Small protein B RB4867 adba1e2a7ff519453454278ab0468566 210 Hamap MF_00023 SsrA-binding protein [smpB]. 56 210 54.07 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 RB4867 adba1e2a7ff519453454278ab0468566 210 Pfam PF01668 SmpB protein 66 128 1.2E-24 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 RB4867 adba1e2a7ff519453454278ab0468566 210 ProSitePatterns PS01317 SsrA-binding protein. 84 96 - T 11-11-2016 IPR020081 SsrA-binding protein, conserved site RB12019 a79958fd98c99c7dcbd83b707b506c02 332 SUPERFAMILY SSF51430 1 318 9.69E-65 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB12019 a79958fd98c99c7dcbd83b707b506c02 332 Gene3D G3DSA:3.20.20.100 1 318 6.9E-64 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB12019 a79958fd98c99c7dcbd83b707b506c02 332 Pfam PF00248 Aldo/keto reductase family 15 319 3.5E-53 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain RB1887 16ff2469dafe022a1d98f216bdfb2be7 488 Gene3D G3DSA:3.40.605.10 6 258 3.8E-43 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB1887 16ff2469dafe022a1d98f216bdfb2be7 488 SUPERFAMILY SSF53720 5 484 3.8E-90 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB1887 16ff2469dafe022a1d98f216bdfb2be7 488 Pfam PF00171 Aldehyde dehydrogenase family 19 443 2.6E-45 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB1887 16ff2469dafe022a1d98f216bdfb2be7 488 Gene3D G3DSA:3.40.309.10 259 442 2.1E-42 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB4299 b3b37c1580fa0e72b916cb9d0265c3bd 96 Pfam PF01527 Transposase 1 77 9.6E-13 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB4299 b3b37c1580fa0e72b916cb9d0265c3bd 96 Gene3D G3DSA:1.10.10.60 8 89 2.3E-19 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB4299 b3b37c1580fa0e72b916cb9d0265c3bd 96 SUPERFAMILY SSF46689 3 94 5.02E-22 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB13184 806b44158bd1f437ae108b11b8c1e525 207 Pfam PF13899 Thioredoxin-like 81 162 4.6E-18 T 11-11-2016 RB13184 806b44158bd1f437ae108b11b8c1e525 207 ProSitePatterns PS00194 Thioredoxin family active site. 101 119 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RB13184 806b44158bd1f437ae108b11b8c1e525 207 Gene3D G3DSA:3.40.30.10 79 187 2.8E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold RB13184 806b44158bd1f437ae108b11b8c1e525 207 SUPERFAMILY SSF52833 71 188 1.16E-31 T 11-11-2016 IPR012336 Thioredoxin-like fold RB11247 3c6d519abfc5c5d284234504f82cc62a 387 PIRSF PIRSF029347 1 387 6.4E-168 T 11-11-2016 IPR014555 RecF-like RB11247 3c6d519abfc5c5d284234504f82cc62a 387 Gene3D G3DSA:3.40.50.300 225 373 4.3E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11247 3c6d519abfc5c5d284234504f82cc62a 387 Gene3D G3DSA:3.40.50.300 2 125 4.3E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11247 3c6d519abfc5c5d284234504f82cc62a 387 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 348 7.5E-34 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB11247 3c6d519abfc5c5d284234504f82cc62a 387 SUPERFAMILY SSF52540 2 82 9.02E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11247 3c6d519abfc5c5d284234504f82cc62a 387 SUPERFAMILY SSF52540 259 357 9.02E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 56 1.3E-4 T 11-11-2016 IPR027379 Cardiolipin synthase N-terminal RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 Pfam PF13091 PLD-like domain 308 432 1.3E-26 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 Pfam PF13091 PLD-like domain 118 260 1.3E-14 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 SUPERFAMILY SSF56024 95 294 7.63E-42 T 11-11-2016 RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 SMART SM00155 378 405 5.8E-4 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 SMART SM00155 200 227 0.029 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 SUPERFAMILY SSF56024 252 443 2.92E-38 T 11-11-2016 RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 Gene3D G3DSA:3.30.870.10 297 433 2.0E-30 T 11-11-2016 RB5830 d6b4ec9d3aae56fa130f87b621222ac0 461 Gene3D G3DSA:3.30.870.10 98 296 7.2E-44 T 11-11-2016 RB2661 90e5ac975e5924971ce0fabdd8f720ea 344 Gene3D G3DSA:3.30.465.10 139 259 6.3E-31 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RB2661 90e5ac975e5924971ce0fabdd8f720ea 344 SUPERFAMILY SSF56176 63 240 1.64E-31 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RB2661 90e5ac975e5924971ce0fabdd8f720ea 344 Gene3D G3DSA:3.90.78.10 272 343 8.0E-11 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RB2661 90e5ac975e5924971ce0fabdd8f720ea 344 Pfam PF01565 FAD binding domain 83 212 4.9E-18 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RB2661 90e5ac975e5924971ce0fabdd8f720ea 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 50.908 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RB2661 90e5ac975e5924971ce0fabdd8f720ea 344 Gene3D G3DSA:3.30.43.10 68 130 5.1E-16 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RB2661 90e5ac975e5924971ce0fabdd8f720ea 344 SUPERFAMILY SSF56194 242 344 5.62E-19 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RB2661 90e5ac975e5924971ce0fabdd8f720ea 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 248 341 1.4E-10 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RB2579 4eebcfb6c77b834e1a1d19b48056f9fa 474 SUPERFAMILY SSF53720 42 464 7.85E-60 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB2579 4eebcfb6c77b834e1a1d19b48056f9fa 474 Gene3D G3DSA:3.40.605.10 43 256 2.5E-27 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB2579 4eebcfb6c77b834e1a1d19b48056f9fa 474 PIRSF PIRSF036410 3 474 8.6E-209 T 11-11-2016 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related RB2579 4eebcfb6c77b834e1a1d19b48056f9fa 474 Pfam PF00171 Aldehyde dehydrogenase family 42 428 2.3E-35 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB2579 4eebcfb6c77b834e1a1d19b48056f9fa 474 Gene3D G3DSA:3.40.309.10 257 432 7.5E-23 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB4417 c26f214bca6e8816b67e2d24604b8652 368 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 200 248 - T 11-11-2016 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4417 c26f214bca6e8816b67e2d24604b8652 368 Gene3D G3DSA:2.60.40.420 154 267 3.5E-37 T 11-11-2016 IPR008972 Cupredoxin RB4417 c26f214bca6e8816b67e2d24604b8652 368 SUPERFAMILY SSF49503 148 315 2.43E-46 T 11-11-2016 IPR008972 Cupredoxin RB4417 c26f214bca6e8816b67e2d24604b8652 368 Gene3D G3DSA:1.10.760.10 271 367 3.0E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4417 c26f214bca6e8816b67e2d24604b8652 368 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 175 250 2.5E-18 T 11-11-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4417 c26f214bca6e8816b67e2d24604b8652 368 SUPERFAMILY SSF46626 278 367 9.75E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4417 c26f214bca6e8816b67e2d24604b8652 368 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 75 264 1.9E-51 T 11-11-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4417 c26f214bca6e8816b67e2d24604b8652 368 Pfam PF00034 Cytochrome c 278 368 5.5E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7389 f5205e41849270e9b8ef3a8aaba5149f 375 Pfam PF14319 Transposase zinc-binding domain 7 114 9.2E-35 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB7389 f5205e41849270e9b8ef3a8aaba5149f 375 Pfam PF04986 Putative transposase 141 312 2.7E-50 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB6167 f5205e41849270e9b8ef3a8aaba5149f 375 Pfam PF14319 Transposase zinc-binding domain 7 114 9.2E-35 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB6167 f5205e41849270e9b8ef3a8aaba5149f 375 Pfam PF04986 Putative transposase 141 312 2.7E-50 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB956 f5205e41849270e9b8ef3a8aaba5149f 375 Pfam PF14319 Transposase zinc-binding domain 7 114 9.2E-35 T 11-11-2016 IPR026889 Transposase zinc-binding domain RB956 f5205e41849270e9b8ef3a8aaba5149f 375 Pfam PF04986 Putative transposase 141 312 2.7E-50 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB6171 2900a473e2a820133709329c2c8c70d8 347 SUPERFAMILY SSF56349 44 222 1.09E-51 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB6171 2900a473e2a820133709329c2c8c70d8 347 Pfam PF00589 Phage integrase family 49 211 3.6E-48 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB6171 2900a473e2a820133709329c2c8c70d8 347 Gene3D G3DSA:1.10.443.10 49 214 4.9E-50 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB3840 04826050ea28754bc6f6c40347ccf81c 168 Gene3D G3DSA:3.10.180.10 4 164 2.8E-29 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB3840 04826050ea28754bc6f6c40347ccf81c 168 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 149 6.1E-11 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RB3840 04826050ea28754bc6f6c40347ccf81c 168 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 3 163 1.7E-99 T 11-11-2016 IPR019883 Lactoylglutathione lyase RB3840 04826050ea28754bc6f6c40347ccf81c 168 SUPERFAMILY SSF54593 5 154 2.82E-31 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB2339 3a41e2ec5b3e625fa5e1d62a93e061d4 189 Pfam PF07609 Protein of unknown function (DUF1572) 4 163 5.5E-68 T 11-11-2016 IPR011466 Protein of unknown function DUF1572 RB2339 3a41e2ec5b3e625fa5e1d62a93e061d4 189 SUPERFAMILY SSF109854 3 149 2.44E-25 T 11-11-2016 RB2339 3a41e2ec5b3e625fa5e1d62a93e061d4 189 Gene3D G3DSA:1.20.120.450 26 149 9.3E-15 T 11-11-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RB11476 d8de4edafdb3fc3bc259f154cefc8698 196 SUPERFAMILY SSF55729 18 150 5.85E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB11476 d8de4edafdb3fc3bc259f154cefc8698 196 Gene3D G3DSA:3.40.630.30 12 147 1.1E-16 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB11476 d8de4edafdb3fc3bc259f154cefc8698 196 Pfam PF13527 Acetyltransferase (GNAT) domain 17 145 7.1E-12 T 11-11-2016 RB11249 1a902e39c850ca49b0b9a837ab8acaa2 425 SUPERFAMILY SSF52266 36 242 5.83E-24 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB11249 1a902e39c850ca49b0b9a837ab8acaa2 425 Gene3D G3DSA:3.40.50.1110 52 245 9.6E-22 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB11249 1a902e39c850ca49b0b9a837ab8acaa2 425 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 57 229 9.3E-11 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB1917 207552b628e479fc08887f869f5cc0cd 700 SUPERFAMILY SSF50998 383 697 4.71E-43 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB1917 207552b628e479fc08887f869f5cc0cd 700 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 683 697 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB1917 207552b628e479fc08887f869f5cc0cd 700 Pfam PF13226 Domain of unknown function (DUF4034) 90 215 4.8E-8 T 11-11-2016 IPR025115 Domain of unknown function DUF4034 RB1917 207552b628e479fc08887f869f5cc0cd 700 SMART SM00320 608 654 21.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 SMART SM00320 524 563 3.7 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 SMART SM00320 481 521 56.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 SMART SM00320 566 605 0.012 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 SMART SM00320 657 696 6.1E-10 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 Pfam PF00400 WD domain, G-beta repeat 541 563 0.047 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 Pfam PF00400 WD domain, G-beta repeat 659 696 2.0E-7 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 Pfam PF00400 WD domain, G-beta repeat 581 605 0.2 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 Gene3D G3DSA:2.130.10.10 430 439 1.0E-39 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB1917 207552b628e479fc08887f869f5cc0cd 700 Gene3D G3DSA:2.130.10.10 491 696 1.0E-39 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 SUPERFAMILY SSF117281 97 361 3.01E-49 T 11-11-2016 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 Pfam PF01344 Kelch motif 222 266 2.1E-4 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 Pfam PF01344 Kelch motif 170 216 2.8E-7 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 SMART SM00612 232 289 0.11 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 SMART SM00612 86 128 0.79 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 SMART SM00612 182 231 0.13 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 SMART SM00612 129 179 2.6 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 SMART SM00612 290 338 0.32 T 11-11-2016 IPR006652 Kelch repeat type 1 GO:0005515 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 Pfam PF13964 Kelch motif 279 328 2.5E-8 T 11-11-2016 RB3599 4c5f866d45eaf37aac14b134ac7b9134 365 Gene3D G3DSA:2.120.10.80 96 364 9.9E-49 T 11-11-2016 IPR015915 Kelch-type beta propeller GO:0005515 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 Pfam PF00701 Dihydrodipicolinate synthetase family 23 314 1.6E-56 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 154 184 - T 11-11-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 Gene3D G3DSA:3.20.20.70 22 319 7.4E-79 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 SMART SM01130 22 317 5.5E-79 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 SUPERFAMILY SSF51569 21 318 1.78E-73 T 11-11-2016 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 PRINTS PR00146 Dihydrodipicolinate synthase signature 56 77 1.5E-13 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 PRINTS PR00146 Dihydrodipicolinate synthase signature 124 140 1.5E-13 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 PRINTS PR00146 Dihydrodipicolinate synthase signature 92 110 1.5E-13 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 PRINTS PR00146 Dihydrodipicolinate synthase signature 149 166 1.5E-13 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB8798 a53ea725f6ac6887dedfbdac2797fe5a 319 PIRSF PIRSF001365 18 319 1.9E-68 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB11967 66d7f6532d3eb22cc40e10e1ec7eb3ca 130 Gene3D G3DSA:3.10.129.10 7 126 3.6E-39 T 11-11-2016 IPR029069 HotDog domain RB11967 66d7f6532d3eb22cc40e10e1ec7eb3ca 130 PIRSF PIRSF003230 1 130 4.9E-47 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RB11967 66d7f6532d3eb22cc40e10e1ec7eb3ca 130 Pfam PF03061 Thioesterase superfamily 25 105 1.6E-15 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 RB11967 66d7f6532d3eb22cc40e10e1ec7eb3ca 130 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 123 1.9E-29 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RB11967 66d7f6532d3eb22cc40e10e1ec7eb3ca 130 SUPERFAMILY SSF54637 7 126 1.4E-35 T 11-11-2016 IPR029069 HotDog domain RB6552 7133baa32454b12caa10a912fa7e934c 337 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 203 219 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RB6552 7133baa32454b12caa10a912fa7e934c 337 SUPERFAMILY SSF75620 1 324 4.19E-112 T 11-11-2016 RB6552 7133baa32454b12caa10a912fa7e934c 337 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 324 6.3E-125 T 11-11-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RB6552 7133baa32454b12caa10a912fa7e934c 337 Pfam PF03462 PCRF domain 1 178 3.0E-51 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RB6552 7133baa32454b12caa10a912fa7e934c 337 Gene3D G3DSA:3.30.160.20 186 264 5.5E-36 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain RB6552 7133baa32454b12caa10a912fa7e934c 337 Pfam PF00472 RF-1 domain 187 296 3.0E-36 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RB6552 7133baa32454b12caa10a912fa7e934c 337 SMART SM00937 35 153 4.8E-37 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RB6552 7133baa32454b12caa10a912fa7e934c 337 Gene3D G3DSA:1.20.58.410 1 74 1.1E-18 T 11-11-2016 RB7688 8f2749333054d36880005c94b4ecc4ae 131 Pfam PF07636 PSRT 30 61 2.9E-18 T 11-11-2016 IPR011504 PSRT RB11490 f08253b5f68722762e58013db8c7aa8a 181 Pfam PF14358 Domain of unknown function (DUF4405) 95 155 1.2E-12 T 11-11-2016 IPR025517 Domain of unknown function DUF4405 RB11490 f08253b5f68722762e58013db8c7aa8a 181 SUPERFAMILY SSF81342 36 156 3.84E-5 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 RB10816 7c460ba6c26c45d5f8d99f47261f6abe 376 Pfam PF13177 DNA polymerase III, delta subunit 37 206 1.6E-38 T 11-11-2016 RB10816 7c460ba6c26c45d5f8d99f47261f6abe 376 Gene3D G3DSA:1.10.8.60 200 255 3.4E-4 T 11-11-2016 RB10816 7c460ba6c26c45d5f8d99f47261f6abe 376 SUPERFAMILY SSF52540 30 259 2.5E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10816 7c460ba6c26c45d5f8d99f47261f6abe 376 Gene3D G3DSA:3.40.50.300 30 199 3.0E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9985 cca50537e958c4fa37b8725f05e24d58 184 SUPERFAMILY SSF81301 5 144 2.65E-12 T 11-11-2016 RB9985 cca50537e958c4fa37b8725f05e24d58 184 Pfam PF09970 Nucleotidyl transferase of unknown function (DUF2204) 6 157 2.1E-5 T 11-11-2016 IPR018700 Protein of unknown function DUF2204 RB9421 9a7634779dad152a6e811f6e8cccf9d8 675 SMART SM00327 97 298 1.4E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9421 9a7634779dad152a6e811f6e8cccf9d8 675 Pfam PF07705 CARDB 254 337 4.9E-5 T 11-11-2016 IPR011635 CARDB domain RB9421 9a7634779dad152a6e811f6e8cccf9d8 675 Gene3D G3DSA:3.40.50.410 100 197 2.2E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9421 9a7634779dad152a6e811f6e8cccf9d8 675 Pfam PF07584 Aerotolerance regulator N-terminal 17 88 4.2E-17 T 11-11-2016 IPR024163 Aerotolerance regulator, N-terminal RB9421 9a7634779dad152a6e811f6e8cccf9d8 675 SUPERFAMILY SSF53300 100 231 2.52E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9421 9a7634779dad152a6e811f6e8cccf9d8 675 Pfam PF13519 von Willebrand factor type A domain 100 205 8.0E-13 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9502 b0447a4135a971081bb845946f58fd62 368 SMART SM00327 114 305 4.2E-21 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9502 b0447a4135a971081bb845946f58fd62 368 Gene3D G3DSA:3.40.50.410 113 301 9.0E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9502 b0447a4135a971081bb845946f58fd62 368 SUPERFAMILY SSF53300 113 301 6.23E-34 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9502 b0447a4135a971081bb845946f58fd62 368 Pfam PF00092 von Willebrand factor type A domain 116 298 1.7E-23 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7184 444f04185619cbc087b6ee7f6a59b151 190 SUPERFAMILY SSF52172 63 184 3.13E-13 T 11-11-2016 IPR011006 CheY-like superfamily RB7184 444f04185619cbc087b6ee7f6a59b151 190 SMART SM00448 67 179 0.0088 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7184 444f04185619cbc087b6ee7f6a59b151 190 Pfam PF00072 Response regulator receiver domain 70 179 3.1E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB7184 444f04185619cbc087b6ee7f6a59b151 190 Gene3D G3DSA:3.40.50.2300 64 187 1.8E-12 T 11-11-2016 RB7184 444f04185619cbc087b6ee7f6a59b151 190 Pfam PF12728 Helix-turn-helix domain 3 54 1.5E-9 T 11-11-2016 RB7184 444f04185619cbc087b6ee7f6a59b151 190 SUPERFAMILY SSF46955 3 56 5.04E-7 T 11-11-2016 IPR009061 Putative DNA-binding domain RB5478 e16e4a94fc7c402c1f80aff0daf0100d 131 Gene3D G3DSA:3.40.50.2300 3 125 9.2E-33 T 11-11-2016 RB5478 e16e4a94fc7c402c1f80aff0daf0100d 131 SUPERFAMILY SSF52172 2 117 5.41E-32 T 11-11-2016 IPR011006 CheY-like superfamily RB5478 e16e4a94fc7c402c1f80aff0daf0100d 131 SMART SM00448 2 113 1.1E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5478 e16e4a94fc7c402c1f80aff0daf0100d 131 Pfam PF00072 Response regulator receiver domain 4 113 7.0E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB9183 ee8e795b03f41512aa723a190be69e98 761 Gene3D G3DSA:3.30.1950.10 582 632 6.4E-7 T 11-11-2016 RB9183 ee8e795b03f41512aa723a190be69e98 761 Gene3D G3DSA:3.30.1950.10 490 559 1.7E-14 T 11-11-2016 RB9183 ee8e795b03f41512aa723a190be69e98 761 Pfam PF10531 SLBB domain 641 686 2.4E-7 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB9183 ee8e795b03f41512aa723a190be69e98 761 Gene3D G3DSA:3.10.560.10 633 726 3.5E-12 T 11-11-2016 RB9183 ee8e795b03f41512aa723a190be69e98 761 Pfam PF02563 Polysaccharide biosynthesis/export protein 484 559 3.0E-14 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 RB8527 8f3f37dbbb974a37086123ba76f75cbc 330 Pfam PF07596 Protein of unknown function (DUF1559) 39 312 1.1E-71 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8527 8f3f37dbbb974a37086123ba76f75cbc 330 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 33 5.9E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8527 8f3f37dbbb974a37086123ba76f75cbc 330 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 2.2E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8527 8f3f37dbbb974a37086123ba76f75cbc 330 Gene3D G3DSA:3.30.700.10 15 74 5.8E-7 T 11-11-2016 RB8527 8f3f37dbbb974a37086123ba76f75cbc 330 SUPERFAMILY SSF54523 15 102 4.71E-22 T 11-11-2016 RB3001 0213183aeb31a5b6fa7369f5c84acd68 487 SUPERFAMILY SSF50939 392 430 2.16E-30 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3001 0213183aeb31a5b6fa7369f5c84acd68 487 SUPERFAMILY SSF50939 69 280 2.16E-30 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB3001 0213183aeb31a5b6fa7369f5c84acd68 487 Gene3D G3DSA:2.130.10.10 96 344 4.1E-10 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB3001 0213183aeb31a5b6fa7369f5c84acd68 487 Gene3D G3DSA:2.130.10.10 395 433 4.1E-10 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB607 6903e2f01862a6bd501525acfc9ff824 598 Pfam PF00884 Sulfatase 36 361 7.1E-60 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB607 6903e2f01862a6bd501525acfc9ff824 598 Gene3D G3DSA:3.30.1120.10 376 468 1.9E-17 T 11-11-2016 RB607 6903e2f01862a6bd501525acfc9ff824 598 SUPERFAMILY SSF53649 34 471 1.6E-118 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB607 6903e2f01862a6bd501525acfc9ff824 598 Gene3D G3DSA:3.40.720.10 33 375 6.6E-97 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5245 f73701bfaa55d584e352079ae5624e2b 219 Pfam PF03006 Haemolysin-III related 13 202 1.5E-25 T 11-11-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RB8505 ce3a81d6af44857e0d5d9260866d2b05 439 Gene3D G3DSA:2.140.10.10 29 432 7.1E-55 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB8505 ce3a81d6af44857e0d5d9260866d2b05 439 Pfam PF13360 PQQ-like domain 109 365 2.0E-28 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB8505 ce3a81d6af44857e0d5d9260866d2b05 439 SMART SM00564 93 127 95.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB8505 ce3a81d6af44857e0d5d9260866d2b05 439 SMART SM00564 148 180 0.078 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB8505 ce3a81d6af44857e0d5d9260866d2b05 439 SMART SM00564 198 232 0.56 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB8505 ce3a81d6af44857e0d5d9260866d2b05 439 SUPERFAMILY SSF50998 45 422 6.8E-55 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB3513 9cf4f6dfe530b1af3336cfba84e54064 477 Pfam PF07632 Protein of unknown function (DUF1593) 29 296 3.1E-97 T 11-11-2016 IPR011483 Protein of unknown function DUF1593 RB3513 9cf4f6dfe530b1af3336cfba84e54064 477 SUPERFAMILY SSF53590 28 167 5.49E-9 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB304 009f503adad684e3d111d636b8644d04 424 Gene3D G3DSA:1.10.760.10 277 406 3.7E-46 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB304 009f503adad684e3d111d636b8644d04 424 Gene3D G3DSA:1.10.760.10 236 245 3.7E-46 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB304 009f503adad684e3d111d636b8644d04 424 Pfam PF00034 Cytochrome c 295 406 2.1E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB304 009f503adad684e3d111d636b8644d04 424 Gene3D G3DSA:1.10.760.10 93 235 1.5E-43 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB304 009f503adad684e3d111d636b8644d04 424 SUPERFAMILY SSF46626 90 236 1.57E-46 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB304 009f503adad684e3d111d636b8644d04 424 SUPERFAMILY SSF46626 278 406 3.4E-28 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB304 009f503adad684e3d111d636b8644d04 424 Pfam PF03150 Di-haem cytochrome c peroxidase 103 245 3.6E-46 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 SUPERFAMILY SSF48452 260 433 1.61E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 SUPERFAMILY SSF69318 531 921 5.75E-44 T 11-11-2016 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 Gene3D G3DSA:1.25.40.10 90 140 3.7E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 Gene3D G3DSA:1.25.40.10 176 194 3.7E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 Gene3D G3DSA:1.25.40.10 261 434 3.7E-17 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 SUPERFAMILY SSF48452 92 288 4.49E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 Gene3D G3DSA:2.130.10.130 706 919 6.3E-11 T 11-11-2016 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 Gene3D G3DSA:2.130.10.130 532 661 2.4E-13 T 11-11-2016 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 Pfam PF07593 ASPIC and UnbV 950 1016 1.1E-17 T 11-11-2016 IPR011519 ASPIC/UnbV RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 602 662 2.6E-12 T 11-11-2016 RB6914 c55d3d4ff8e16476440057c4347e0c4b 1028 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 785 850 1.3E-8 T 11-11-2016 RB9101 5517d57968276fb1be20ec7298825bc0 183 SMART SM00867 25 182 2.0E-37 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RB9101 5517d57968276fb1be20ec7298825bc0 183 Gene3D G3DSA:2.40.128.110 27 183 4.6E-39 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RB9101 5517d57968276fb1be20ec7298825bc0 183 SUPERFAMILY SSF101874 27 183 1.01E-37 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RB9101 5517d57968276fb1be20ec7298825bc0 183 Pfam PF04264 YceI-like domain 28 180 8.6E-32 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RB10981 08bd48e429e0f43a7c3fc8e171362820 600 Gene3D G3DSA:2.40.50.100 229 260 2.6E-7 T 11-11-2016 RB10981 08bd48e429e0f43a7c3fc8e171362820 600 Gene3D G3DSA:2.40.50.100 96 111 2.6E-7 T 11-11-2016 RB10981 08bd48e429e0f43a7c3fc8e171362820 600 SUPERFAMILY SSF111369 92 133 3.53E-5 T 11-11-2016 RB10981 08bd48e429e0f43a7c3fc8e171362820 600 Pfam PF13437 HlyD family secretion protein 231 330 1.7E-16 T 11-11-2016 RB10981 08bd48e429e0f43a7c3fc8e171362820 600 SUPERFAMILY SSF111369 144 179 4.71E-15 T 11-11-2016 RB10981 08bd48e429e0f43a7c3fc8e171362820 600 SUPERFAMILY SSF111369 208 327 4.71E-15 T 11-11-2016 RB6678 e0b256cc4da47061410b94006bac197d 117 Pfam PF07621 Protein of unknown function (DUF1582) 31 55 1.3E-13 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB8441 6a151182c5043889880e170d3f2646b3 907 Gene3D G3DSA:2.60.130.10 414 488 2.0E-4 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RB8441 6a151182c5043889880e170d3f2646b3 907 Pfam PF05569 BlaR1 peptidase M56 118 338 1.2E-29 T 11-11-2016 IPR008756 Peptidase M56 RB4305 cd237644509f6b58d0525c8fbdb77e2a 380 Pfam PF02687 FtsX-like permease family 258 370 2.9E-11 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB4305 cd237644509f6b58d0525c8fbdb77e2a 380 Pfam PF12704 MacB-like periplasmic core domain 19 221 2.8E-17 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB10007 220ee71ac1a168bdf2719cc8c3d13c6c 313 Gene3D G3DSA:3.40.1740.10 72 114 1.7E-16 T 11-11-2016 RB10007 220ee71ac1a168bdf2719cc8c3d13c6c 313 Gene3D G3DSA:3.40.1740.10 251 293 1.7E-16 T 11-11-2016 RB10007 220ee71ac1a168bdf2719cc8c3d13c6c 313 SUPERFAMILY SSF143456 196 291 2.04E-25 T 11-11-2016 RB10007 220ee71ac1a168bdf2719cc8c3d13c6c 313 SUPERFAMILY SSF143456 68 137 2.04E-25 T 11-11-2016 RB10007 220ee71ac1a168bdf2719cc8c3d13c6c 313 Pfam PF02622 Uncharacterized ACR, COG1678 93 291 9.8E-26 T 11-11-2016 IPR003774 Protein of unknown function UPF0301 RB6533 9bf25d2484302f483ef59c8d550781aa 766 SMART SM00563 63 176 8.4E-25 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RB6533 9bf25d2484302f483ef59c8d550781aa 766 ProSitePatterns PS00455 Putative AMP-binding domain signature. 405 416 - T 11-11-2016 IPR020845 AMP-binding, conserved site RB6533 9bf25d2484302f483ef59c8d550781aa 766 SUPERFAMILY SSF69593 12 211 1.57E-31 T 11-11-2016 RB6533 9bf25d2484302f483ef59c8d550781aa 766 Pfam PF00501 AMP-binding enzyme 287 652 4.7E-73 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RB6533 9bf25d2484302f483ef59c8d550781aa 766 Gene3D G3DSA:3.40.50.980 411 562 2.4E-38 T 11-11-2016 RB6533 9bf25d2484302f483ef59c8d550781aa 766 Gene3D G3DSA:3.40.1130.10 37 173 4.9E-13 T 11-11-2016 RB6533 9bf25d2484302f483ef59c8d550781aa 766 Gene3D G3DSA:2.30.38.10 575 649 8.0E-26 T 11-11-2016 RB6533 9bf25d2484302f483ef59c8d550781aa 766 Pfam PF01553 Acyltransferase 50 172 5.0E-21 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RB6533 9bf25d2484302f483ef59c8d550781aa 766 SUPERFAMILY SSF56801 276 761 1.01E-96 T 11-11-2016 RB6533 9bf25d2484302f483ef59c8d550781aa 766 Gene3D G3DSA:3.30.300.30 657 761 1.9E-7 T 11-11-2016 RB6533 9bf25d2484302f483ef59c8d550781aa 766 Gene3D G3DSA:3.40.50.980 271 410 1.3E-17 T 11-11-2016 RB10458 4c5986b08f828530c37438aba7913a92 206 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 68 137 6.5E-24 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 RB10458 4c5986b08f828530c37438aba7913a92 206 SUPERFAMILY SSF54928 66 176 1.06E-39 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RB10458 4c5986b08f828530c37438aba7913a92 206 SMART SM00360 67 140 8.0E-33 T 11-11-2016 IPR000504 RNA recognition motif domain GO:0003676 RB10458 4c5986b08f828530c37438aba7913a92 206 Gene3D G3DSA:3.30.70.330 66 148 4.6E-32 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RB10987 c058c8d2dfdd4b6e35d2a558ec25fd35 294 Pfam PF02567 Phenazine biosynthesis-like protein 22 278 2.1E-72 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RB10987 c058c8d2dfdd4b6e35d2a558ec25fd35 294 SUPERFAMILY SSF54506 17 282 9.1E-82 T 11-11-2016 RB10987 c058c8d2dfdd4b6e35d2a558ec25fd35 294 Gene3D G3DSA:3.10.310.10 17 142 1.7E-47 T 11-11-2016 RB10987 c058c8d2dfdd4b6e35d2a558ec25fd35 294 PIRSF PIRSF016184 15 282 7.8E-55 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RB10987 c058c8d2dfdd4b6e35d2a558ec25fd35 294 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 18 281 9.5E-42 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 RB10987 c058c8d2dfdd4b6e35d2a558ec25fd35 294 Gene3D G3DSA:3.10.310.10 143 270 2.2E-41 T 11-11-2016 RB3774 0dd9fe34f22dee269e30095c5d53df8d 138 SUPERFAMILY SSF54593 3 133 1.61E-29 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB3774 0dd9fe34f22dee269e30095c5d53df8d 138 Gene3D G3DSA:3.10.180.10 7 134 1.5E-30 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB3774 0dd9fe34f22dee269e30095c5d53df8d 138 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 116 1.2E-18 T 11-11-2016 RB8853 b4164a33366135c2920a367824742c45 367 PIRSF PIRSF000451 1 367 3.5E-127 T 11-11-2016 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 RB8853 b4164a33366135c2920a367824742c45 367 Gene3D G3DSA:3.40.47.10 230 367 5.3E-36 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB8853 b4164a33366135c2920a367824742c45 367 SUPERFAMILY SSF53901 1 218 9.22E-45 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB8853 b4164a33366135c2920a367824742c45 367 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 3 217 1.2E-23 T 11-11-2016 IPR001099 Chalcone/stilbene synthase, N-terminal RB8853 b4164a33366135c2920a367824742c45 367 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 234 367 3.9E-21 T 11-11-2016 IPR012328 Chalcone/stilbene synthase, C-terminal RB8853 b4164a33366135c2920a367824742c45 367 Gene3D G3DSA:3.40.47.10 1 219 8.0E-52 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB8853 b4164a33366135c2920a367824742c45 367 SUPERFAMILY SSF53901 227 367 8.16E-37 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB4725 9a4efbf1f976fff8d04f2f4370b5d5c9 315 Pfam PF00106 short chain dehydrogenase 23 167 1.4E-24 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4725 9a4efbf1f976fff8d04f2f4370b5d5c9 315 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 1.3E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4725 9a4efbf1f976fff8d04f2f4370b5d5c9 315 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 1.3E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4725 9a4efbf1f976fff8d04f2f4370b5d5c9 315 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 1.3E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4725 9a4efbf1f976fff8d04f2f4370b5d5c9 315 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 226 1.3E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB4725 9a4efbf1f976fff8d04f2f4370b5d5c9 315 Gene3D G3DSA:3.40.50.720 19 226 3.3E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4725 9a4efbf1f976fff8d04f2f4370b5d5c9 315 SUPERFAMILY SSF51735 19 231 7.94E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10627 3e80d9cc082d05905e0d496d8d15a880 93 Gene3D G3DSA:2.30.33.40 1 93 5.1E-35 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB10627 3e80d9cc082d05905e0d496d8d15a880 93 Pfam PF00166 Chaperonin 10 Kd subunit 1 92 1.3E-32 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB10627 3e80d9cc082d05905e0d496d8d15a880 93 SUPERFAMILY SSF50129 1 93 2.35E-30 T 11-11-2016 IPR011032 GroES-like RB10627 3e80d9cc082d05905e0d496d8d15a880 93 Hamap MF_00580 10 kDa chaperonin [groS]. 1 93 22.421 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB10627 3e80d9cc082d05905e0d496d8d15a880 93 SMART SM00883 1 92 2.0E-47 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB10627 3e80d9cc082d05905e0d496d8d15a880 93 ProSitePatterns PS00681 Chaperonins cpn10 signature. 1 25 - T 11-11-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RB10627 3e80d9cc082d05905e0d496d8d15a880 93 PRINTS PR00297 10kDa chaperonin signature 79 92 3.1E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB10627 3e80d9cc082d05905e0d496d8d15a880 93 PRINTS PR00297 10kDa chaperonin signature 58 70 3.1E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB10627 3e80d9cc082d05905e0d496d8d15a880 93 PRINTS PR00297 10kDa chaperonin signature 23 44 3.1E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB10627 3e80d9cc082d05905e0d496d8d15a880 93 PRINTS PR00297 10kDa chaperonin signature 1 16 3.1E-30 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RB12291 2141a16c8c5617a4f8ad7ceb21a967bb 99 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 5.2E-33 T 11-11-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RB11595 c3a6821c464bc2c7456c32d3b659aaa7 587 Pfam PF00437 Type II/IV secretion system protein 191 450 3.2E-74 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB11595 c3a6821c464bc2c7456c32d3b659aaa7 587 SUPERFAMILY SSF160246 2 138 2.35E-30 T 11-11-2016 RB11595 c3a6821c464bc2c7456c32d3b659aaa7 587 Gene3D G3DSA:3.30.450.90 153 284 2.7E-43 T 11-11-2016 RB11595 c3a6821c464bc2c7456c32d3b659aaa7 587 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 36 140 1.4E-23 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RB11595 c3a6821c464bc2c7456c32d3b659aaa7 587 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 379 393 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB11595 c3a6821c464bc2c7456c32d3b659aaa7 587 SUPERFAMILY SSF52540 175 556 7.56E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11595 c3a6821c464bc2c7456c32d3b659aaa7 587 Gene3D G3DSA:3.40.50.300 291 559 7.9E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11595 c3a6821c464bc2c7456c32d3b659aaa7 587 SMART SM00382 312 480 0.009 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7590 0f90a04430deda8f77c773dc200330ef 993 SUPERFAMILY SSF63411 113 325 1.27E-50 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RB7590 0f90a04430deda8f77c773dc200330ef 993 Gene3D G3DSA:3.30.830.10 108 326 1.3E-51 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 RB7590 0f90a04430deda8f77c773dc200330ef 993 Gene3D G3DSA:3.30.830.10 798 985 1.1E-26 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 RB7590 0f90a04430deda8f77c773dc200330ef 993 Gene3D G3DSA:3.30.830.10 343 516 1.4E-18 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 RB7590 0f90a04430deda8f77c773dc200330ef 993 Gene3D G3DSA:3.30.830.10 565 780 2.7E-25 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 RB7590 0f90a04430deda8f77c773dc200330ef 993 SUPERFAMILY SSF63411 557 788 4.83E-31 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RB7590 0f90a04430deda8f77c773dc200330ef 993 Pfam PF05193 Peptidase M16 inactive domain 736 916 5.0E-23 T 11-11-2016 IPR007863 Peptidase M16, C-terminal RB7590 0f90a04430deda8f77c773dc200330ef 993 Pfam PF05193 Peptidase M16 inactive domain 282 456 1.1E-24 T 11-11-2016 IPR007863 Peptidase M16, C-terminal RB7590 0f90a04430deda8f77c773dc200330ef 993 SUPERFAMILY SSF63411 802 990 4.0E-31 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RB7590 0f90a04430deda8f77c773dc200330ef 993 SUPERFAMILY SSF63411 338 524 2.39E-31 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RB7590 0f90a04430deda8f77c773dc200330ef 993 Pfam PF00675 Insulinase (Peptidase family M16) 125 270 1.1E-20 T 11-11-2016 IPR011765 Peptidase M16, N-terminal RB7590 0f90a04430deda8f77c773dc200330ef 993 Pfam PF00675 Insulinase (Peptidase family M16) 579 706 2.7E-6 T 11-11-2016 IPR011765 Peptidase M16, N-terminal RB7590 0f90a04430deda8f77c773dc200330ef 993 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 145 168 - T 11-11-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RB11030 b59c325bcc2bad520e498d6cdd135506 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB11030 b59c325bcc2bad520e498d6cdd135506 251 Pfam PF00005 ABC transporter 28 172 5.2E-36 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB11030 b59c325bcc2bad520e498d6cdd135506 251 Gene3D G3DSA:3.40.50.300 3 232 3.6E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11030 b59c325bcc2bad520e498d6cdd135506 251 SMART SM00382 37 221 2.0E-19 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11030 b59c325bcc2bad520e498d6cdd135506 251 SUPERFAMILY SSF52540 9 228 2.83E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12862 521dc3c7a7d4c31e57326276f5f1f8b5 655 Gene3D G3DSA:3.90.76.10 84 167 3.6E-27 T 11-11-2016 RB12862 521dc3c7a7d4c31e57326276f5f1f8b5 655 SUPERFAMILY SSF53850 237 646 2.17E-104 T 11-11-2016 RB12862 521dc3c7a7d4c31e57326276f5f1f8b5 655 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 86 160 1.1E-20 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain RB12862 521dc3c7a7d4c31e57326276f5f1f8b5 655 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 237 575 1.6E-65 T 11-11-2016 IPR000914 Solute-binding protein family 5 domain RB12862 521dc3c7a7d4c31e57326276f5f1f8b5 655 Gene3D G3DSA:3.40.190.10 277 427 1.4E-42 T 11-11-2016 RB12862 521dc3c7a7d4c31e57326276f5f1f8b5 655 SUPERFAMILY SSF53850 37 154 1.01E-28 T 11-11-2016 RB12862 521dc3c7a7d4c31e57326276f5f1f8b5 655 Gene3D G3DSA:3.10.105.10 428 623 5.7E-70 T 11-11-2016 RB10295 d4bfe99a70001625b8452fe1640f67b9 308 Gene3D G3DSA:3.40.50.720 139 240 1.2E-16 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10295 d4bfe99a70001625b8452fe1640f67b9 308 SUPERFAMILY SSF53223 17 110 1.73E-33 T 11-11-2016 RB10295 d4bfe99a70001625b8452fe1640f67b9 308 SUPERFAMILY SSF51735 127 237 4.43E-16 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10295 d4bfe99a70001625b8452fe1640f67b9 308 Pfam PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal 31 111 1.7E-32 T 11-11-2016 IPR015259 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal RB10295 d4bfe99a70001625b8452fe1640f67b9 308 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 126 238 7.6E-7 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RB10295 d4bfe99a70001625b8452fe1640f67b9 308 Gene3D G3DSA:3.40.50.10280 17 138 5.1E-56 T 11-11-2016 IPR015259 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal RB1798 e4aa77f0643d91eab2dc9e4e9e905ae6 364 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 64 198 3.2E-64 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB1798 e4aa77f0643d91eab2dc9e4e9e905ae6 364 PIRSF PIRSF002849 3 350 1.1E-123 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB1798 e4aa77f0643d91eab2dc9e4e9e905ae6 364 Gene3D G3DSA:1.10.8.300 228 343 4.1E-35 T 11-11-2016 RB1798 e4aa77f0643d91eab2dc9e4e9e905ae6 364 Gene3D G3DSA:3.40.50.300 46 212 4.0E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1798 e4aa77f0643d91eab2dc9e4e9e905ae6 364 SUPERFAMILY SSF52540 36 320 3.91E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7134 3aa4edc520d68ac2f093c58813674e17 294 Pfam PF00005 ABC transporter 48 198 1.7E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB7134 3aa4edc520d68ac2f093c58813674e17 294 SMART SM00382 57 248 1.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7134 3aa4edc520d68ac2f093c58813674e17 294 SUPERFAMILY SSF52540 32 265 3.59E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7134 3aa4edc520d68ac2f093c58813674e17 294 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB7134 3aa4edc520d68ac2f093c58813674e17 294 Gene3D G3DSA:3.40.50.300 31 262 3.5E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2416 259b22fb0f40096c5d0d4ba9c0c0d963 389 Pfam PF01841 Transglutaminase-like superfamily 217 314 3.8E-14 T 11-11-2016 IPR002931 Transglutaminase-like RB2416 259b22fb0f40096c5d0d4ba9c0c0d963 389 Gene3D G3DSA:3.90.260.10 253 323 1.2E-4 T 11-11-2016 IPR002931 Transglutaminase-like RB2416 259b22fb0f40096c5d0d4ba9c0c0d963 389 SUPERFAMILY SSF54001 196 333 3.64E-19 T 11-11-2016 RB2416 259b22fb0f40096c5d0d4ba9c0c0d963 389 SMART SM00460 246 317 1.9E-5 T 11-11-2016 IPR002931 Transglutaminase-like RB3348 b38356c01a1d1896e69b61ae304a5e9a 391 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 36 367 1.2E-49 T 11-11-2016 RB3348 b38356c01a1d1896e69b61ae304a5e9a 391 SUPERFAMILY SSF48208 8 387 8.5E-101 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB3348 b38356c01a1d1896e69b61ae304a5e9a 391 Gene3D G3DSA:1.50.10.10 2 388 5.4E-114 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RB10395 62047e8c1079d37b215c40dbba381fd7 252 Gene3D G3DSA:3.40.470.10 12 252 6.7E-95 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB10395 62047e8c1079d37b215c40dbba381fd7 252 SUPERFAMILY SSF52141 14 250 1.93E-54 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RB10978 b796709f6b514e4c04ce308ee4d11e56 122 SUPERFAMILY SSF103481 5 105 1.12E-20 T 11-11-2016 RB10978 b796709f6b514e4c04ce308ee4d11e56 122 Pfam PF00893 Small Multidrug Resistance protein 1 93 9.3E-29 T 11-11-2016 IPR000390 Small multidrug resistance protein family GO:0016021 RB5940 8933918491335aa12ea862d31ffec71c 459 Gene3D G3DSA:3.30.450.90 102 199 8.7E-35 T 11-11-2016 RB5940 8933918491335aa12ea862d31ffec71c 459 Pfam PF00437 Type II/IV secretion system protein 105 381 8.8E-83 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RB5940 8933918491335aa12ea862d31ffec71c 459 SUPERFAMILY SSF52540 86 421 2.82E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5940 8933918491335aa12ea862d31ffec71c 459 Gene3D G3DSA:3.40.50.300 202 421 3.7E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4489 8dfbc0b95645eb986db19be89c2aec6d 172 SUPERFAMILY SSF47226 64 147 2.19E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB4489 8dfbc0b95645eb986db19be89c2aec6d 172 Gene3D G3DSA:1.20.120.160 58 142 6.1E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Gene3D G3DSA:3.30.1280.10 109 173 9.6E-9 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 SUPERFAMILY SSF56042 442 664 1.15E-46 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Gene3D G3DSA:3.90.650.10 877 990 1.7E-4 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Gene3D G3DSA:3.30.1330.10 244 259 2.4E-34 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Gene3D G3DSA:3.30.1330.10 299 434 2.4E-34 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Pfam PF00586 AIR synthase related protein, N-terminal domain 308 433 3.9E-15 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Pfam PF00586 AIR synthase related protein, N-terminal domain 687 814 8.8E-7 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 215 1009 206.379 T 11-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 109 172 1.3E-5 T 11-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Pfam PF02769 AIR synthase related protein, C-terminal domain 443 595 6.2E-25 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Pfam PF02769 AIR synthase related protein, C-terminal domain 829 985 5.0E-22 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 SUPERFAMILY SSF82697 109 175 1.12E-10 T 11-11-2016 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Gene3D G3DSA:3.30.1330.10 652 820 7.1E-41 T 11-11-2016 IPR016188 PurM-like, N-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 SUPERFAMILY SSF55326 218 255 1.64E-46 T 11-11-2016 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 SUPERFAMILY SSF55326 298 434 1.64E-46 T 11-11-2016 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 298 920 8.6E-163 T 11-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 Gene3D G3DSA:3.90.650.10 440 590 2.4E-4 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 SUPERFAMILY SSF55326 636 824 3.4E-56 T 11-11-2016 RB5395 704fbdc328d91a7872bd6327e1ca0813 1009 SUPERFAMILY SSF56042 826 1005 4.19E-40 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain RB1317 d322c9477f6b9f9496246cedd4bc2008 530 Pfam PF08502 LeuA allosteric (dimerisation) domain 384 524 1.1E-24 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB1317 d322c9477f6b9f9496246cedd4bc2008 530 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 10 529 9.7E-199 T 11-11-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 RB1317 d322c9477f6b9f9496246cedd4bc2008 530 SMART SM00917 381 525 1.5E-32 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB1317 d322c9477f6b9f9496246cedd4bc2008 530 Gene3D G3DSA:3.20.20.70 6 354 2.7E-119 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB1317 d322c9477f6b9f9496246cedd4bc2008 530 SUPERFAMILY SSF51569 7 301 6.78E-77 T 11-11-2016 RB1317 d322c9477f6b9f9496246cedd4bc2008 530 SUPERFAMILY SSF110921 423 521 2.75E-19 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB1317 d322c9477f6b9f9496246cedd4bc2008 530 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 17 33 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RB1317 d322c9477f6b9f9496246cedd4bc2008 530 Pfam PF00682 HMGL-like 10 284 3.8E-43 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RB5689 45da4cd12945da9f83c9f207cb5a7a76 493 Pfam PF01612 3'-5' exonuclease 93 262 2.1E-30 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RB5689 45da4cd12945da9f83c9f207cb5a7a76 493 SUPERFAMILY SSF47819 395 467 5.23E-11 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RB5689 45da4cd12945da9f83c9f207cb5a7a76 493 Gene3D G3DSA:3.30.420.10 91 267 1.7E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB5689 45da4cd12945da9f83c9f207cb5a7a76 493 SUPERFAMILY SSF47819 285 389 2.43E-20 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RB5689 45da4cd12945da9f83c9f207cb5a7a76 493 SMART SM00474 92 265 5.1E-29 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RB5689 45da4cd12945da9f83c9f207cb5a7a76 493 Pfam PF00570 HRDC domain 306 373 3.2E-13 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RB5689 45da4cd12945da9f83c9f207cb5a7a76 493 SUPERFAMILY SSF53098 75 294 4.68E-52 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB5689 45da4cd12945da9f83c9f207cb5a7a76 493 SMART SM00341 303 383 3.0E-7 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RB2588 e89779c3c50feebeca08b9f9bb561b88 241 PIRSF PIRSF010130 3 236 4.0E-90 T 11-11-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 RB2588 e89779c3c50feebeca08b9f9bb561b88 241 Pfam PF06130 Phosphate propanoyltransferase 158 223 4.5E-14 T 11-11-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 RB2588 e89779c3c50feebeca08b9f9bb561b88 241 Pfam PF06130 Phosphate propanoyltransferase 49 128 8.4E-24 T 11-11-2016 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 RB13211 b75e5cdb4b61a7727642e004a5bfa990 830 Gene3D G3DSA:3.90.550.10 25 173 1.1E-26 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB13211 b75e5cdb4b61a7727642e004a5bfa990 830 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 331 498 6.5E-20 T 11-11-2016 RB13211 b75e5cdb4b61a7727642e004a5bfa990 830 Pfam PF00535 Glycosyl transferase family 2 29 156 5.3E-27 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB13211 b75e5cdb4b61a7727642e004a5bfa990 830 SUPERFAMILY SSF53448 22 247 2.31E-40 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5060 6dd5486384d4d22ff496854f463320f2 197 Pfam PF03703 Bacterial PH domain 102 179 1.5E-17 T 11-11-2016 IPR005182 Domain of unknown function DUF304 RB9243 1a0af9e774a37f57f75396929d4621ef 326 SUPERFAMILY SSF53448 31 179 5.85E-10 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9243 1a0af9e774a37f57f75396929d4621ef 326 Gene3D G3DSA:3.90.550.10 32 93 2.0E-5 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6443 c81847e4f22bb6f92b514e9be9102a6d 397 Gene3D G3DSA:3.40.640.10 9 250 9.2E-93 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB6443 c81847e4f22bb6f92b514e9be9102a6d 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 393 1.2E-140 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB6443 c81847e4f22bb6f92b514e9be9102a6d 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 194 208 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB6443 c81847e4f22bb6f92b514e9be9102a6d 397 SUPERFAMILY SSF53383 11 393 3.8E-111 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB6443 c81847e4f22bb6f92b514e9be9102a6d 397 Gene3D G3DSA:3.90.1150.10 252 394 1.1E-48 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB6443 c81847e4f22bb6f92b514e9be9102a6d 397 PIRSF PIRSF001434 1 397 1.2E-143 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 SUPERFAMILY SSF46626 266 345 9.89E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 SUPERFAMILY SSF46626 88 149 4.73E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 SUPERFAMILY SSF46626 196 231 4.73E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 268 342 2.6E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 Gene3D G3DSA:1.10.760.10 48 164 6.9E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 Gene3D G3DSA:1.10.760.10 265 349 6.3E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 Gene3D G3DSA:2.120.10.30 680 1003 3.3E-20 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 SUPERFAMILY SSF63829 671 841 2.55E-9 T 11-11-2016 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 SUPERFAMILY SSF63829 543 587 2.55E-9 T 11-11-2016 RB4008 cd06db97f6159ddd895fb6fbd6804e28 1130 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 89 227 1.8E-23 T 11-11-2016 IPR013427 Haem-binding domain, putative RB7907 21680bf3d6afd0291a52fe1800d73afe 280 Gene3D G3DSA:3.40.50.1820 35 265 4.8E-44 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7907 21680bf3d6afd0291a52fe1800d73afe 280 Pfam PF07859 alpha/beta hydrolase fold 72 177 3.5E-19 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB7907 21680bf3d6afd0291a52fe1800d73afe 280 SUPERFAMILY SSF53474 45 262 7.42E-39 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6365 87b4c5f0e807e174b29800bdf8cf6676 385 SUPERFAMILY SSF48431 145 362 5.1E-6 T 11-11-2016 IPR011030 Vitellinogen, superhelical GO:0005319|GO:0006869 Reactome: R-HSA-174800 RB8584 f9ea61c4d4c664b8231c43e02cc47ea9 159 SUPERFAMILY SSF55804 1 150 8.37E-37 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RB8584 f9ea61c4d4c664b8231c43e02cc47ea9 159 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 150 1.2E-32 T 11-11-2016 IPR002178 PTS EIIA type-2 domain RB8584 f9ea61c4d4c664b8231c43e02cc47ea9 159 Gene3D G3DSA:3.40.930.10 1 154 1.7E-43 T 11-11-2016 IPR002178 PTS EIIA type-2 domain RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 Gene3D G3DSA:1.10.1670.10 126 202 7.6E-27 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 TIGRFAM TIGR01083 nth: endonuclease III 7 193 1.4E-66 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 Hamap MF_00942 Endonuclease III [nth]. 3 212 33.648 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 PIRSF PIRSF001435 1 209 3.9E-43 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 SUPERFAMILY SSF48150 3 209 1.16E-62 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 SMART SM00478 41 188 3.5E-55 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 ProSitePatterns PS01155 Endonuclease III family signature. 105 134 - T 11-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 171 1.9E-19 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 Pfam PF00633 Helix-hairpin-helix motif 103 130 5.7E-7 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 RB5097 7a64e10f1cd6c0b24af7c40e4a0efc3a 219 Gene3D G3DSA:1.10.340.30 28 125 6.6E-31 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RB7074 829ae6b5db4242d7dbd04ebbc1e99260 1223 Pfam PF12704 MacB-like periplasmic core domain 35 199 1.8E-6 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB7074 829ae6b5db4242d7dbd04ebbc1e99260 1223 Pfam PF02687 FtsX-like permease family 583 706 1.8E-16 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB7074 829ae6b5db4242d7dbd04ebbc1e99260 1223 Pfam PF02687 FtsX-like permease family 1100 1203 4.2E-11 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB3501 aa6a3158953d53c15b155e789d072d30 490 Pfam PF07632 Protein of unknown function (DUF1593) 42 309 1.0E-82 T 11-11-2016 IPR011483 Protein of unknown function DUF1593 RB3501 aa6a3158953d53c15b155e789d072d30 490 SUPERFAMILY SSF53590 41 177 1.7E-5 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB11945 6ca97b2cd4dd29b5dcda34457845d41f 556 Pfam PF00171 Aldehyde dehydrogenase family 64 499 8.8E-97 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB11945 6ca97b2cd4dd29b5dcda34457845d41f 556 Gene3D G3DSA:3.40.309.10 299 480 3.4E-31 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB11945 6ca97b2cd4dd29b5dcda34457845d41f 556 SUPERFAMILY SSF53720 87 511 7.07E-82 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB11945 6ca97b2cd4dd29b5dcda34457845d41f 556 Gene3D G3DSA:3.40.605.10 86 298 1.7E-34 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB2825 bdbf150aacece4aee646c4ba26952f2a 297 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 51 289 4.2E-28 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RB2825 bdbf150aacece4aee646c4ba26952f2a 297 SUPERFAMILY SSF51695 46 296 4.71E-51 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RB2825 bdbf150aacece4aee646c4ba26952f2a 297 Gene3D G3DSA:3.20.20.190 38 297 4.1E-55 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RB7615 67181d40d3103ae4e98a7c8eebd55bdc 138 SUPERFAMILY SSF55729 1 130 3.77E-28 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB7615 67181d40d3103ae4e98a7c8eebd55bdc 138 Gene3D G3DSA:3.40.630.30 1 130 6.9E-30 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB7615 67181d40d3103ae4e98a7c8eebd55bdc 138 Pfam PF00583 Acetyltransferase (GNAT) family 53 125 1.4E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB11075 dbd7f1ba07d77b225db23eab3b50a109 167 Gene3D G3DSA:1.10.10.10 18 164 2.4E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11075 dbd7f1ba07d77b225db23eab3b50a109 167 Pfam PF01047 MarR family 54 113 1.3E-8 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11075 dbd7f1ba07d77b225db23eab3b50a109 167 SUPERFAMILY SSF46785 24 163 1.36E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11075 dbd7f1ba07d77b225db23eab3b50a109 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.1E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11075 dbd7f1ba07d77b225db23eab3b50a109 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.1E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11075 dbd7f1ba07d77b225db23eab3b50a109 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.1E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB11075 dbd7f1ba07d77b225db23eab3b50a109 167 SMART SM00347 47 148 7.5E-19 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB4811 95bd39f52cd4e2c5a0a59a55398dc7fd 438 SUPERFAMILY SSF53098 38 413 8.34E-46 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB4811 95bd39f52cd4e2c5a0a59a55398dc7fd 438 Gene3D G3DSA:3.90.350.10 217 356 2.1E-4 T 11-11-2016 IPR014736 Transposase, Tn5-like, core RB4811 95bd39f52cd4e2c5a0a59a55398dc7fd 438 Pfam PF01609 Transposase DDE domain 147 382 1.9E-18 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB9810 95bd39f52cd4e2c5a0a59a55398dc7fd 438 SUPERFAMILY SSF53098 38 413 8.34E-46 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB9810 95bd39f52cd4e2c5a0a59a55398dc7fd 438 Gene3D G3DSA:3.90.350.10 217 356 2.1E-4 T 11-11-2016 IPR014736 Transposase, Tn5-like, core RB9810 95bd39f52cd4e2c5a0a59a55398dc7fd 438 Pfam PF01609 Transposase DDE domain 147 382 1.9E-18 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB4904 688362ba15872f79d3675980f5ec209a 203 Gene3D G3DSA:3.40.50.1240 12 202 1.7E-47 T 11-11-2016 IPR029033 Histidine phosphatase superfamily RB4904 688362ba15872f79d3675980f5ec209a 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 13 197 1.3E-47 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RB4904 688362ba15872f79d3675980f5ec209a 203 SUPERFAMILY SSF53254 11 202 3.43E-50 T 11-11-2016 IPR029033 Histidine phosphatase superfamily RB4904 688362ba15872f79d3675980f5ec209a 203 SMART SM00855 12 156 4.7E-15 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RB7196 772c1296a0bfad820d561227ff464abb 194 SUPERFAMILY SSF52980 12 191 6.43E-17 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RB7196 772c1296a0bfad820d561227ff464abb 194 Pfam PF05685 Putative restriction endonuclease 18 179 2.1E-31 T 11-11-2016 IPR008538 Domain of unknown function DUF820 RB7196 772c1296a0bfad820d561227ff464abb 194 Gene3D G3DSA:3.90.1570.10 10 191 4.3E-16 T 11-11-2016 IPR012296 Nuclease, putative, TT1808 RB3221 93e726d2cad30c3d5eed207c353a8ca7 406 Pfam PF14237 Domain of unknown function (DUF4339) 341 383 8.2E-14 T 11-11-2016 IPR025640 Domain of unknown function DUF4339 RB3221 93e726d2cad30c3d5eed207c353a8ca7 406 SUPERFAMILY SSF117892 154 262 8.11E-8 T 11-11-2016 IPR001107 Band 7 domain RB3221 93e726d2cad30c3d5eed207c353a8ca7 406 Pfam PF13421 SPFH domain-Band 7 family 56 267 6.2E-100 T 11-11-2016 RB11127 3bb5df17efb5f2a209b98dd39c390938 571 Pfam PF00884 Sulfatase 100 466 3.7E-53 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB11127 3bb5df17efb5f2a209b98dd39c390938 571 Gene3D G3DSA:3.30.1120.10 483 563 1.5E-17 T 11-11-2016 RB11127 3bb5df17efb5f2a209b98dd39c390938 571 SUPERFAMILY SSF53649 98 239 5.95E-112 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB11127 3bb5df17efb5f2a209b98dd39c390938 571 SUPERFAMILY SSF53649 266 563 5.95E-112 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB11127 3bb5df17efb5f2a209b98dd39c390938 571 Gene3D G3DSA:3.40.720.10 97 482 1.8E-93 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB11127 3bb5df17efb5f2a209b98dd39c390938 571 Pfam PF16347 Domain of unknown function (DUF4976) 473 560 1.1E-9 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB12904 9804b94b301eeb3b95506e16956cab2d 312 Gene3D G3DSA:3.90.226.10 50 310 2.4E-66 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB12904 9804b94b301eeb3b95506e16956cab2d 312 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 159 173 7.1E-33 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB12904 9804b94b301eeb3b95506e16956cab2d 312 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 260 271 7.1E-33 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB12904 9804b94b301eeb3b95506e16956cab2d 312 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 248 7.1E-33 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB12904 9804b94b301eeb3b95506e16956cab2d 312 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 194 212 7.1E-33 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB12904 9804b94b301eeb3b95506e16956cab2d 312 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 282 291 7.1E-33 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB12904 9804b94b301eeb3b95506e16956cab2d 312 Pfam PF01039 Carboxyl transferase domain 90 271 1.2E-15 T 11-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB12904 9804b94b301eeb3b95506e16956cab2d 312 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 33 312 37.684 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB12904 9804b94b301eeb3b95506e16956cab2d 312 SUPERFAMILY SSF52096 55 308 2.16E-75 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB12904 9804b94b301eeb3b95506e16956cab2d 312 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 44 308 9.9E-116 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 RB9311 ed9ef06d958faac0bb244b14e86a2dbb 461 Gene3D G3DSA:2.40.50.100 307 345 6.2E-6 T 11-11-2016 RB9311 ed9ef06d958faac0bb244b14e86a2dbb 461 Gene3D G3DSA:2.40.50.100 202 234 6.2E-6 T 11-11-2016 RB9311 ed9ef06d958faac0bb244b14e86a2dbb 461 Pfam PF13533 Biotin-lipoyl like 205 251 3.6E-9 T 11-11-2016 RB6813 e9018e9dce37089dd5f4cab785ed32f9 388 Gene3D G3DSA:3.40.30.10 234 388 1.7E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6813 e9018e9dce37089dd5f4cab785ed32f9 388 Gene3D G3DSA:3.40.30.10 28 51 1.7E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6813 e9018e9dce37089dd5f4cab785ed32f9 388 Pfam PF00578 AhpC/TSA family 240 360 4.8E-18 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB6813 e9018e9dce37089dd5f4cab785ed32f9 388 SUPERFAMILY SSF52833 241 387 1.53E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold RB3034 4aaf2e026fc68e3b23deef1257a60ca5 838 Pfam PF07631 Protein of unknown function (DUF1592) 410 538 4.4E-18 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB3034 4aaf2e026fc68e3b23deef1257a60ca5 838 Pfam PF07635 Planctomycete cytochrome C 53 98 2.6E-7 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB3034 4aaf2e026fc68e3b23deef1257a60ca5 838 Pfam PF07624 Protein of unknown function (DUF1585) 755 824 2.5E-12 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB3034 4aaf2e026fc68e3b23deef1257a60ca5 838 Pfam PF07627 Protein of unknown function (DUF1588) 638 733 1.4E-25 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB8898 5a6979c9db5eab832795907f7a7d4c0a 321 SUPERFAMILY SSF64182 5 320 1.47E-40 T 11-11-2016 RB1832 a6690dd5d1ed9e1e7a929748e91dbf8c 419 Pfam PF03116 NQR2, RnfD, RnfE family 44 408 4.2E-102 T 11-11-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 RB1832 a6690dd5d1ed9e1e7a929748e91dbf8c 419 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 3 416 35.753 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 RB1832 a6690dd5d1ed9e1e7a929748e91dbf8c 419 PIRSF PIRSF016055 2 418 6.9E-190 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 RB1832 a6690dd5d1ed9e1e7a929748e91dbf8c 419 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 4 412 3.6E-160 T 11-11-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 RB1977 4513a77e9ac340a2e1c15822646da275 385 SUPERFAMILY SSF56281 15 375 1.7E-52 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB1977 4513a77e9ac340a2e1c15822646da275 385 Gene3D G3DSA:3.60.15.10 29 129 1.2E-13 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 SUPERFAMILY SSF48371 496 841 2.98E-12 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 Gene3D G3DSA:1.25.10.10 496 631 2.6E-8 T 11-11-2016 IPR011989 Armadillo-like helical RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 SUPERFAMILY SSF46626 928 983 3.64E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 SUPERFAMILY SSF46626 1036 1059 3.64E-12 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 930 1060 8.2E-38 T 11-11-2016 IPR013427 Haem-binding domain, putative RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 Gene3D G3DSA:1.10.760.10 905 961 1.1E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 Gene3D G3DSA:1.10.760.10 999 1064 1.1E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 SUPERFAMILY SSF50952 81 127 4.71E-14 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 SUPERFAMILY SSF50952 162 457 4.71E-14 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 Gene3D G3DSA:2.120.10.30 92 127 7.1E-20 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 Gene3D G3DSA:2.120.10.30 163 470 7.1E-20 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 Pfam PF00034 Cytochrome c 932 1060 9.9E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6185 8e0d691bb6d53546e8fcdd187cdfe5fd 1074 Pfam PF13646 HEAT repeats 559 637 1.1E-7 T 11-11-2016 RB6215 3d0cb0a3fa962ac7731bbd152f613cac 420 Gene3D G3DSA:3.40.640.10 33 278 1.0E-96 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB6215 3d0cb0a3fa962ac7731bbd152f613cac 420 SUPERFAMILY SSF53383 3 410 4.87E-172 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB6215 3d0cb0a3fa962ac7731bbd152f613cac 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 51.224 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RB6215 3d0cb0a3fa962ac7731bbd152f613cac 420 Gene3D G3DSA:3.90.1150.10 279 411 2.3E-50 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB6215 3d0cb0a3fa962ac7731bbd152f613cac 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 11-11-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RB6215 3d0cb0a3fa962ac7731bbd152f613cac 420 PIRSF PIRSF000412 1 415 1.1E-167 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RB6215 3d0cb0a3fa962ac7731bbd152f613cac 420 Pfam PF00464 Serine hydroxymethyltransferase 4 380 5.0E-165 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 SUPERFAMILY SSF52540 322 564 2.79E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 31 117 1.4E-17 T 11-11-2016 IPR032030 YscD, cytoplasmic domain RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 Gene3D G3DSA:3.40.50.300 320 495 1.4E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 Gene3D G3DSA:3.30.450.40 161 312 5.1E-4 T 11-11-2016 IPR029016 GAF domain-like RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 Pfam PF02954 Bacterial regulatory protein, Fis family 583 619 1.4E-11 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 347 360 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 536 545 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 SUPERFAMILY SSF46689 536 621 4.48E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 SUPERFAMILY SSF49879 15 120 7.27E-24 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 Gene3D G3DSA:1.10.8.60 496 566 9.8E-25 T 11-11-2016 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 585 602 3.0E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 602 622 3.0E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 409 424 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 Pfam PF00158 Sigma-54 interaction domain 323 489 1.7E-66 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 Gene3D G3DSA:2.60.200.20 23 120 4.3E-24 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 Gene3D G3DSA:1.10.10.60 579 617 1.9E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 SMART SM00240 46 96 3.3E-12 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB8745 e0583958e87c69898a2bcde69ddd0ddb 623 SMART SM00382 343 486 3.4E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5426 31401c73a220ba3813b858c37cec12c7 939 SUPERFAMILY SSF46626 22 135 3.1E-10 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5426 31401c73a220ba3813b858c37cec12c7 939 Gene3D G3DSA:1.10.760.10 23 130 2.9E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5426 31401c73a220ba3813b858c37cec12c7 939 Pfam PF07635 Planctomycete cytochrome C 55 114 1.1E-20 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB5426 31401c73a220ba3813b858c37cec12c7 939 Pfam PF07583 Protein of unknown function (DUF1549) 173 383 1.5E-74 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB5426 31401c73a220ba3813b858c37cec12c7 939 Gene3D G3DSA:2.60.120.260 482 569 3.3E-4 T 11-11-2016 IPR008979 Galactose-binding domain-like RB5426 31401c73a220ba3813b858c37cec12c7 939 Pfam PF07587 Protein of unknown function (DUF1553) 658 916 5.6E-88 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB7685 7e8d214a1137c900edd7852c3ce867d4 388 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 40 62 5.5E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7685 7e8d214a1137c900edd7852c3ce867d4 388 Gene3D G3DSA:3.30.700.10 43 105 1.1E-6 T 11-11-2016 RB7685 7e8d214a1137c900edd7852c3ce867d4 388 Pfam PF07596 Protein of unknown function (DUF1559) 67 370 5.7E-72 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB7685 7e8d214a1137c900edd7852c3ce867d4 388 SUPERFAMILY SSF54523 43 150 1.73E-21 T 11-11-2016 RB7685 7e8d214a1137c900edd7852c3ce867d4 388 Pfam PF13633 Prokaryotic N-terminal methylation site 41 66 2.7E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7685 7e8d214a1137c900edd7852c3ce867d4 388 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 41 61 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB7924 7e919fba48932a29ee7231c5fa998740 228 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 221 2.6E-24 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7924 7e919fba48932a29ee7231c5fa998740 228 Gene3D G3DSA:1.10.10.10 161 222 2.6E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7924 7e919fba48932a29ee7231c5fa998740 228 SUPERFAMILY SSF88659 135 223 1.33E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7924 7e919fba48932a29ee7231c5fa998740 228 Pfam PF08281 Sigma-70, region 4 165 217 4.2E-14 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7924 7e919fba48932a29ee7231c5fa998740 228 SUPERFAMILY SSF88946 22 113 1.41E-9 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7924 7e919fba48932a29ee7231c5fa998740 228 Gene3D G3DSA:1.10.1740.10 24 122 3.3E-11 T 11-11-2016 RB7603 282e02bbce5fb4011b3b82f86f61d43f 836 Gene3D G3DSA:1.20.1600.10 242 637 1.6E-26 T 11-11-2016 RB7603 282e02bbce5fb4011b3b82f86f61d43f 836 SUPERFAMILY SSF56954 22 51 1.12E-36 T 11-11-2016 RB7603 282e02bbce5fb4011b3b82f86f61d43f 836 SUPERFAMILY SSF56954 88 154 1.12E-36 T 11-11-2016 RB7603 282e02bbce5fb4011b3b82f86f61d43f 836 SUPERFAMILY SSF56954 258 636 1.12E-36 T 11-11-2016 RB7603 282e02bbce5fb4011b3b82f86f61d43f 836 Pfam PF02321 Outer membrane efflux protein 258 378 1.7E-7 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB7603 282e02bbce5fb4011b3b82f86f61d43f 836 Pfam PF02321 Outer membrane efflux protein 428 625 2.7E-13 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB3495 9d125848f1b0c13a75b35754a9598713 218 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 19 216 3.9E-51 T 11-11-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein RB3495 9d125848f1b0c13a75b35754a9598713 218 SUPERFAMILY SSF141318 48 218 1.16E-52 T 11-11-2016 RB5720 d102741cdcdc4361c0af25228760df2d 314 Gene3D G3DSA:3.60.110.10 30 302 1.1E-63 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5720 d102741cdcdc4361c0af25228760df2d 314 SUPERFAMILY SSF56317 29 301 2.35E-61 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB5720 d102741cdcdc4361c0af25228760df2d 314 Pfam PF00795 Carbon-nitrogen hydrolase 31 275 2.9E-37 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RB11575 18aab1bda88494d876672f22b73bf523 349 SUPERFAMILY SSF48239 38 346 1.32E-37 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11575 18aab1bda88494d876672f22b73bf523 349 Gene3D G3DSA:1.50.10.20 27 262 2.3E-31 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB2386 463216f9c080cc00f464b1c99aeafb55 528 Gene3D G3DSA:2.40.50.100 316 348 6.1E-13 T 11-11-2016 RB2386 463216f9c080cc00f464b1c99aeafb55 528 Gene3D G3DSA:2.40.50.100 223 255 6.1E-13 T 11-11-2016 RB2386 463216f9c080cc00f464b1c99aeafb55 528 SUPERFAMILY SSF111369 209 435 3.79E-45 T 11-11-2016 RB2386 463216f9c080cc00f464b1c99aeafb55 528 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 199 510 1.3E-64 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB2386 463216f9c080cc00f464b1c99aeafb55 528 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 219 428 1.1E-18 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB5881 c6043a47b8b4d457b7bb7f93cf7a804d 223 Pfam PF13744 Helix-turn-helix domain 154 209 3.1E-8 T 11-11-2016 RB5881 c6043a47b8b4d457b7bb7f93cf7a804d 223 SUPERFAMILY SSF47413 150 214 1.49E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB5881 c6043a47b8b4d457b7bb7f93cf7a804d 223 Gene3D G3DSA:1.10.260.40 150 202 8.2E-9 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RB5881 c6043a47b8b4d457b7bb7f93cf7a804d 223 SMART SM00530 154 207 0.0047 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB8060 b58650c71a9c457b573f61ed7db57a0b 281 Gene3D G3DSA:3.30.1330.30 9 114 1.6E-14 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like RB8060 b58650c71a9c457b573f61ed7db57a0b 281 SUPERFAMILY SSF55315 9 115 4.71E-12 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like RB8060 b58650c71a9c457b573f61ed7db57a0b 281 Gene3D G3DSA:3.40.1280.10 131 279 3.2E-43 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RB8060 b58650c71a9c457b573f61ed7db57a0b 281 SUPERFAMILY SSF75217 129 278 3.73E-36 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases RB8060 b58650c71a9c457b573f61ed7db57a0b 281 Pfam PF00588 SpoU rRNA Methylase family 133 271 2.0E-29 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RB4613 c9df28efe9a2d877665ba6cbbb6fcc4a 110 SUPERFAMILY SSF89360 1 98 3.53E-27 T 11-11-2016 IPR000361 FeS cluster biogenesis RB4613 c9df28efe9a2d877665ba6cbbb6fcc4a 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 109 6.0E-34 T 11-11-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RB4613 c9df28efe9a2d877665ba6cbbb6fcc4a 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 105 4.4E-19 T 11-11-2016 IPR000361 FeS cluster biogenesis RB4613 c9df28efe9a2d877665ba6cbbb6fcc4a 110 Gene3D G3DSA:2.60.300.12 2 98 1.7E-29 T 11-11-2016 IPR000361 FeS cluster biogenesis RB4613 c9df28efe9a2d877665ba6cbbb6fcc4a 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 11-11-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RB8313 834a8901fb1f41a093be1400437260c1 414 Pfam PF13579 Glycosyl transferase 4-like domain 13 206 3.6E-18 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB8313 834a8901fb1f41a093be1400437260c1 414 Gene3D G3DSA:3.40.50.2000 199 388 1.3E-23 T 11-11-2016 RB8313 834a8901fb1f41a093be1400437260c1 414 SUPERFAMILY SSF53756 2 47 5.23E-75 T 11-11-2016 RB8313 834a8901fb1f41a093be1400437260c1 414 SUPERFAMILY SSF53756 77 409 5.23E-75 T 11-11-2016 RB8313 834a8901fb1f41a093be1400437260c1 414 Pfam PF00534 Glycosyl transferases group 1 221 388 1.9E-33 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB10148 23db2747b36d2a26bae4d03ef40d307b 254 Pfam PF07589 PEP-CTERM motif 223 247 3.1E-4 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB10148 23db2747b36d2a26bae4d03ef40d307b 254 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 224 247 1.6E-4 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB8501 017716533895dbf4dfe0a5f883c66aaf 381 SUPERFAMILY SSF50939 37 379 1.09E-54 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB8501 017716533895dbf4dfe0a5f883c66aaf 381 Pfam PF13088 BNR repeat-like domain 62 361 7.6E-99 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB8501 017716533895dbf4dfe0a5f883c66aaf 381 Gene3D G3DSA:2.120.10.10 39 381 1.5E-66 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB9493 d10f2e5b5b669fc62340f3baaedbeffe 155 SUPERFAMILY SSF55729 8 146 5.56E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB9493 d10f2e5b5b669fc62340f3baaedbeffe 155 Pfam PF13508 Acetyltransferase (GNAT) domain 57 130 7.4E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB9493 d10f2e5b5b669fc62340f3baaedbeffe 155 Gene3D G3DSA:3.40.630.30 4 133 1.1E-25 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB5128 a693799d53ee6f3ce3865474d4a576c1 604 Gene3D G3DSA:1.10.760.10 584 604 6.2E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5128 a693799d53ee6f3ce3865474d4a576c1 604 Gene3D G3DSA:1.10.760.10 415 532 6.2E-14 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5128 a693799d53ee6f3ce3865474d4a576c1 604 SUPERFAMILY SSF46626 412 533 6.94E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB5128 a693799d53ee6f3ce3865474d4a576c1 604 SUPERFAMILY SSF46626 585 604 6.94E-20 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB6596 2a6d36f48a618045191ba73016eae355 230 Pfam PF10056 Uncharacterized conserved protein (DUF2293) 128 212 1.4E-21 T 11-11-2016 IPR018744 Domain of unknown function DUF2293 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 174 183 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 Gene3D G3DSA:3.40.120.10 337 484 8.5E-31 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 SUPERFAMILY SSF53738 64 263 9.81E-40 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 247 341 7.1E-23 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 Gene3D G3DSA:3.40.120.10 50 246 4.9E-53 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 Gene3D G3DSA:3.40.120.10 257 336 1.1E-13 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 356 479 1.6E-23 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 SUPERFAMILY SSF53738 333 485 2.18E-24 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 Gene3D G3DSA:3.30.310.50 510 584 2.9E-12 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 SUPERFAMILY SSF55957 553 606 1.44E-9 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 SUPERFAMILY SSF55957 475 511 1.44E-9 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 555 585 4.0E-6 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 SUPERFAMILY SSF53738 251 341 8.24E-13 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB6061 6cd32dd92e3290d3f735f082d0f0db51 616 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 77 210 3.1E-34 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RB10074 799436af6c9a3ce38b0947bc231aef95 273 Gene3D G3DSA:3.40.50.150 33 136 1.6E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10074 799436af6c9a3ce38b0947bc231aef95 273 Gene3D G3DSA:3.40.50.150 178 224 1.6E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10074 799436af6c9a3ce38b0947bc231aef95 273 Pfam PF08241 Methyltransferase domain 40 135 2.0E-12 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RB10074 799436af6c9a3ce38b0947bc231aef95 273 SUPERFAMILY SSF53335 28 144 9.18E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10074 799436af6c9a3ce38b0947bc231aef95 273 SUPERFAMILY SSF53335 193 224 9.18E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12347 c50cf169397bc03527da15e5c8d6cf49 324 Gene3D G3DSA:3.40.50.1000 45 321 2.2E-19 T 11-11-2016 IPR023214 HAD-like domain RB12347 c50cf169397bc03527da15e5c8d6cf49 324 SUPERFAMILY SSF56784 39 64 2.18E-20 T 11-11-2016 IPR023214 HAD-like domain RB12347 c50cf169397bc03527da15e5c8d6cf49 324 SUPERFAMILY SSF56784 156 324 2.18E-20 T 11-11-2016 IPR023214 HAD-like domain RB12347 c50cf169397bc03527da15e5c8d6cf49 324 Pfam PF13242 HAD-hyrolase-like 241 291 2.4E-6 T 11-11-2016 RB8236 b9334a519abd2df943b6bd5790f83eb8 115 Gene3D G3DSA:3.30.70.900 12 111 1.7E-25 T 11-11-2016 RB8236 b9334a519abd2df943b6bd5790f83eb8 115 Pfam PF07876 Stress responsive A/B Barrel Domain 16 112 3.6E-20 T 11-11-2016 IPR013097 Stress responsive alpha-beta barrel RB8236 b9334a519abd2df943b6bd5790f83eb8 115 SUPERFAMILY SSF54909 16 110 4.1E-22 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB8236 b9334a519abd2df943b6bd5790f83eb8 115 SMART SM00886 16 113 1.0E-21 T 11-11-2016 IPR013097 Stress responsive alpha-beta barrel RB7144 d5c44b8a9ff07a711635808b19780b47 297 Gene3D G3DSA:3.20.20.370 68 224 1.6E-26 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB7144 d5c44b8a9ff07a711635808b19780b47 297 SUPERFAMILY SSF88713 50 260 2.22E-33 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RB7144 d5c44b8a9ff07a711635808b19780b47 297 Pfam PF01522 Polysaccharide deacetylase 85 224 1.2E-22 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB10065 bf0e125abe0289337aa8a1a8a23dac35 439 Gene3D G3DSA:1.10.3210.10 218 312 5.0E-8 T 11-11-2016 IPR006674 HD domain RB10065 bf0e125abe0289337aa8a1a8a23dac35 439 Pfam PF13487 HD domain 244 306 6.1E-12 T 11-11-2016 RB10065 bf0e125abe0289337aa8a1a8a23dac35 439 SUPERFAMILY SSF109604 195 353 5.02E-13 T 11-11-2016 RB1344 a2928ee9afffd61d1d7de302cbdb9807 88 PIRSF PIRSF004669 2 88 3.0E-28 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RB1344 a2928ee9afffd61d1d7de302cbdb9807 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 4 84 3.2E-26 T 11-11-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 RB1344 a2928ee9afffd61d1d7de302cbdb9807 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 40 55 1.6E-19 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RB1344 a2928ee9afffd61d1d7de302cbdb9807 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 55 77 1.6E-19 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RB1344 a2928ee9afffd61d1d7de302cbdb9807 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 19 40 1.6E-19 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RB1344 a2928ee9afffd61d1d7de302cbdb9807 88 Pfam PF01313 Bacterial export proteins, family 3 7 79 8.7E-28 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 RB11383 0035c399dbe62a50f1d1d1d4b73c63ad 573 SUPERFAMILY SSF88659 511 559 2.18E-5 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11383 0035c399dbe62a50f1d1d1d4b73c63ad 573 Gene3D G3DSA:3.30.240.10 521 549 3.6E-4 T 11-11-2016 IPR000655 Regulatory protein cro GO:0003677|GO:0006355 RB11383 0035c399dbe62a50f1d1d1d4b73c63ad 573 Pfam PF04545 Sigma-70, region 4 513 554 6.3E-6 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB115 2a567dd9d29a0e7f223a30c307972e85 308 Gene3D G3DSA:3.30.700.10 30 80 3.9E-7 T 11-11-2016 RB115 2a567dd9d29a0e7f223a30c307972e85 308 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 28 48 2.5E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB115 2a567dd9d29a0e7f223a30c307972e85 308 Pfam PF13633 Prokaryotic N-terminal methylation site 28 53 4.2E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB115 2a567dd9d29a0e7f223a30c307972e85 308 SUPERFAMILY SSF54523 30 109 1.73E-18 T 11-11-2016 RB115 2a567dd9d29a0e7f223a30c307972e85 308 Pfam PF07596 Protein of unknown function (DUF1559) 54 278 4.9E-43 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB7564 6c9a174f44e4c9e948e990d134bab297 395 SUPERFAMILY SSF53383 11 393 7.93E-63 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB7564 6c9a174f44e4c9e948e990d134bab297 395 Pfam PF00266 Aminotransferase class-V 61 384 6.0E-33 T 11-11-2016 IPR000192 Aminotransferase class V domain RB7564 6c9a174f44e4c9e948e990d134bab297 395 Gene3D G3DSA:3.40.640.10 27 280 7.6E-56 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB905 1b6a300f2a898786050525a9ecdec80a 168 ProSitePatterns PS00018 EF-hand calcium-binding domain. 106 118 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB905 1b6a300f2a898786050525a9ecdec80a 168 Gene3D G3DSA:1.10.238.10 89 125 4.6E-4 T 11-11-2016 IPR011992 EF-hand domain pair RB5811 e181f17ac7e422de371ade00108e3bef 289 Gene3D G3DSA:3.40.50.880 31 285 5.3E-27 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB5811 e181f17ac7e422de371ade00108e3bef 289 Pfam PF06283 Trehalose utilisation 38 277 2.3E-18 T 11-11-2016 IPR029010 ThuA-like domain RB5811 e181f17ac7e422de371ade00108e3bef 289 SUPERFAMILY SSF52317 34 282 2.52E-35 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9948 3f520d783959e0583d0b67661035939e 166 Gene3D G3DSA:1.20.120.450 24 160 2.0E-12 T 11-11-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RB9948 3f520d783959e0583d0b67661035939e 166 SUPERFAMILY SSF109854 7 162 5.86E-25 T 11-11-2016 RB9948 3f520d783959e0583d0b67661035939e 166 Pfam PF12867 DinB superfamily 20 153 8.0E-15 T 11-11-2016 IPR024775 DinB-like domain RB2871 a6bc04e791808f40e7b7a54aa574eb17 349 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 31 346 6.2E-33 T 11-11-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RB2871 a6bc04e791808f40e7b7a54aa574eb17 349 Pfam PF06144 DNA polymerase III, delta subunit 35 193 1.2E-6 T 11-11-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RB2871 a6bc04e791808f40e7b7a54aa574eb17 349 SUPERFAMILY SSF48019 217 347 9.35E-12 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RB2871 a6bc04e791808f40e7b7a54aa574eb17 349 Gene3D G3DSA:1.10.8.60 158 235 1.2E-11 T 11-11-2016 RB2871 a6bc04e791808f40e7b7a54aa574eb17 349 SUPERFAMILY SSF52540 24 211 7.96E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7028 65f0cc0d35c71ada9e24328df5850524 545 Pfam PF13088 BNR repeat-like domain 374 443 4.7E-7 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB7028 65f0cc0d35c71ada9e24328df5850524 545 SUPERFAMILY SSF50939 261 449 1.96E-21 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB7028 65f0cc0d35c71ada9e24328df5850524 545 Gene3D G3DSA:2.120.10.10 244 452 1.4E-20 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB12060 1899ff015473c9b9349f041ba53bdf95 142 Pfam PF08899 Domain of unknown function (DUF1844) 66 137 1.2E-24 T 11-11-2016 IPR014995 Protein of unknown function DUF1844 RB3815 5f4cba5ff4f311fe9093020788ecceae 351 Pfam PF01436 NHL repeat 320 344 8.0E-6 T 11-11-2016 IPR001258 NHL repeat GO:0005515 RB3815 5f4cba5ff4f311fe9093020788ecceae 351 Gene3D G3DSA:2.120.10.30 49 347 9.0E-43 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3815 5f4cba5ff4f311fe9093020788ecceae 351 SUPERFAMILY SSF101898 51 348 2.14E-36 T 11-11-2016 RB12614 eb2a638b2c71e7154e97c981364c693d 264 SUPERFAMILY SSF55831 1 264 7.59E-128 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 1.7E-92 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 84 1.2E-39 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.3E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.3E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.3E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.3E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.3E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 Gene3D G3DSA:3.30.572.10 1 264 1.2E-129 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 Pfam PF00303 Thymidylate synthase 3 264 3.2E-119 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-11-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB12614 eb2a638b2c71e7154e97c981364c693d 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.376 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 RB1009 42d74924df383ade2204ca78aa40ad37 332 Pfam PF01966 HD domain 164 286 2.6E-13 T 11-11-2016 IPR006674 HD domain RB1009 42d74924df383ade2204ca78aa40ad37 332 TIGRFAM TIGR00277 HDIG: HDIG domain 164 207 1.9E-7 T 11-11-2016 IPR006675 HDIG domain RB1009 42d74924df383ade2204ca78aa40ad37 332 SUPERFAMILY SSF109604 154 326 7.66E-35 T 11-11-2016 RB1009 42d74924df383ade2204ca78aa40ad37 332 Gene3D G3DSA:1.10.3210.10 155 326 1.0E-18 T 11-11-2016 IPR006674 HD domain RB1009 42d74924df383ade2204ca78aa40ad37 332 SMART SM00471 160 296 3.2E-8 T 11-11-2016 IPR003607 HD/PDEase domain RB5253 a419e684d0556b8557951ace7d16125a 834 Gene3D G3DSA:2.60.40.1080 62 112 2.0E-6 T 11-11-2016 RB5253 a419e684d0556b8557951ace7d16125a 834 Gene3D G3DSA:2.60.40.1080 230 301 8.1E-7 T 11-11-2016 RB5253 a419e684d0556b8557951ace7d16125a 834 SUPERFAMILY SSF49373 229 308 6.67E-6 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments RB5253 a419e684d0556b8557951ace7d16125a 834 Pfam PF07583 Protein of unknown function (DUF1549) 331 513 3.8E-41 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB5253 a419e684d0556b8557951ace7d16125a 834 SUPERFAMILY SSF49373 60 112 2.2E-5 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments RB5253 a419e684d0556b8557951ace7d16125a 834 Pfam PF07587 Protein of unknown function (DUF1553) 565 804 5.0E-47 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB448 e37bbfc8fe6e2c3df5a29a91309e9023 70 Pfam PF00149 Calcineurin-like phosphoesterase 1 65 3.9E-5 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB448 e37bbfc8fe6e2c3df5a29a91309e9023 70 Gene3D G3DSA:3.60.21.10 1 65 4.2E-12 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB448 e37bbfc8fe6e2c3df5a29a91309e9023 70 SUPERFAMILY SSF56300 1 65 1.75E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB8286 6577ac6164f354f17f403e1680909b85 323 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 25 314 8.1E-67 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB8286 6577ac6164f354f17f403e1680909b85 323 SMART SM00904 189 317 2.5E-39 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RB8286 6577ac6164f354f17f403e1680909b85 323 SUPERFAMILY SSF82114 180 317 1.09E-35 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RB8286 6577ac6164f354f17f403e1680909b85 323 Pfam PF06574 FAD synthetase 21 173 3.9E-40 T 11-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB8286 6577ac6164f354f17f403e1680909b85 323 SUPERFAMILY SSF52374 24 181 1.31E-27 T 11-11-2016 RB8286 6577ac6164f354f17f403e1680909b85 323 Pfam PF01687 Riboflavin kinase 190 314 1.5E-29 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RB8286 6577ac6164f354f17f403e1680909b85 323 Gene3D G3DSA:2.40.30.30 186 317 2.4E-34 T 11-11-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 RB8286 6577ac6164f354f17f403e1680909b85 323 Gene3D G3DSA:3.40.50.620 15 185 9.3E-53 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8286 6577ac6164f354f17f403e1680909b85 323 PIRSF PIRSF004491 2 323 4.6E-105 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RB12159 5a273a67ec932bff669d8cb1404c96bc 513 Gene3D G3DSA:3.40.720.10 381 497 1.4E-8 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12159 5a273a67ec932bff669d8cb1404c96bc 513 SUPERFAMILY SSF53649 345 498 1.2E-23 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB12159 5a273a67ec932bff669d8cb1404c96bc 513 Pfam PF07394 Protein of unknown function (DUF1501) 100 512 2.4E-161 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB9268 b87192c260e4a835d08db2b2a81a0460 81 Pfam PF06289 Flagellar protein (FlbD) 1 57 1.2E-24 T 11-11-2016 IPR009384 Flagellar RB10060 2da5968002e0033cca4097820b40cb9c 109 Pfam PF12840 Helix-turn-helix domain 16 73 3.7E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10060 2da5968002e0033cca4097820b40cb9c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 6.2E-15 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB10060 2da5968002e0033cca4097820b40cb9c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 6.2E-15 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB10060 2da5968002e0033cca4097820b40cb9c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 6.2E-15 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB10060 2da5968002e0033cca4097820b40cb9c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 6.2E-15 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB10060 2da5968002e0033cca4097820b40cb9c 109 Gene3D G3DSA:1.10.10.10 3 82 1.3E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB10060 2da5968002e0033cca4097820b40cb9c 109 SMART SM00418 15 89 4.0E-17 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB10060 2da5968002e0033cca4097820b40cb9c 109 SUPERFAMILY SSF46785 3 83 3.22E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11201 35ed7f70a1413af1963dfdb207453037 146 SMART SM00448 8 130 1.7E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11201 35ed7f70a1413af1963dfdb207453037 146 Pfam PF00072 Response regulator receiver domain 10 130 5.3E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB11201 35ed7f70a1413af1963dfdb207453037 146 Gene3D G3DSA:3.40.50.2300 5 134 4.1E-35 T 11-11-2016 RB11201 35ed7f70a1413af1963dfdb207453037 146 SUPERFAMILY SSF52172 6 137 1.85E-32 T 11-11-2016 IPR011006 CheY-like superfamily RB4869 4f81702fb7c4b468b33ab404a79f8ab9 534 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 11 147 1.6E-23 T 11-11-2016 IPR006512 YidE/YbjL duplication RB4869 4f81702fb7c4b468b33ab404a79f8ab9 534 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 366 517 4.7E-25 T 11-11-2016 IPR006512 YidE/YbjL duplication RB4869 4f81702fb7c4b468b33ab404a79f8ab9 534 Pfam PF02080 TrkA-C domain 280 346 3.1E-13 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB4869 4f81702fb7c4b468b33ab404a79f8ab9 534 Gene3D G3DSA:3.30.70.1450 285 348 4.4E-14 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB4869 4f81702fb7c4b468b33ab404a79f8ab9 534 Pfam PF06826 Predicted Permease Membrane Region 362 529 1.3E-31 T 11-11-2016 IPR006512 YidE/YbjL duplication RB4869 4f81702fb7c4b468b33ab404a79f8ab9 534 Pfam PF06826 Predicted Permease Membrane Region 7 160 3.9E-33 T 11-11-2016 IPR006512 YidE/YbjL duplication RB4869 4f81702fb7c4b468b33ab404a79f8ab9 534 SUPERFAMILY SSF116726 278 349 2.22E-15 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB2401 02f29d7d58112ab73c996d3eb6c09b65 706 Gene3D G3DSA:1.20.144.10 191 326 7.9E-34 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB2401 02f29d7d58112ab73c996d3eb6c09b65 706 Pfam PF00404 Dockerin type I repeat 78 98 9.6E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB2401 02f29d7d58112ab73c996d3eb6c09b65 706 Pfam PF00404 Dockerin type I repeat 116 136 2.0E-4 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB2401 02f29d7d58112ab73c996d3eb6c09b65 706 Pfam PF01569 PAP2 superfamily 456 617 1.5E-9 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB2401 02f29d7d58112ab73c996d3eb6c09b65 706 Gene3D G3DSA:1.10.606.10 327 652 7.5E-82 T 11-11-2016 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal GO:0004601|GO:0055114 RB2401 02f29d7d58112ab73c996d3eb6c09b65 706 SUPERFAMILY SSF48317 190 662 3.27E-108 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB2401 02f29d7d58112ab73c996d3eb6c09b65 706 SUPERFAMILY SSF63446 75 136 7.36E-8 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB2401 02f29d7d58112ab73c996d3eb6c09b65 706 Pfam PF07595 Planctomycete extracellular 42 65 1.9E-5 T 11-11-2016 IPR011506 Planctomycete extracellular RB1063 24445b27e64ec102e294a16e6762254e 371 SUPERFAMILY SSF51735 23 186 1.92E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1063 24445b27e64ec102e294a16e6762254e 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 28 141 1.5E-24 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB1063 24445b27e64ec102e294a16e6762254e 371 Gene3D G3DSA:3.30.360.10 175 371 4.5E-21 T 11-11-2016 RB1063 24445b27e64ec102e294a16e6762254e 371 SUPERFAMILY SSF55347 173 316 9.16E-57 T 11-11-2016 RB1063 24445b27e64ec102e294a16e6762254e 371 Gene3D G3DSA:3.40.50.720 25 165 2.6E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain RB223 756e640ffbcf1d9c4a7c2eddb935e1e3 664 SUPERFAMILY SSF143968 371 526 2.35E-29 T 11-11-2016 RB223 756e640ffbcf1d9c4a7c2eddb935e1e3 664 SUPERFAMILY SSF50475 58 370 5.89E-90 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB223 756e640ffbcf1d9c4a7c2eddb935e1e3 664 Gene3D G3DSA:3.40.1670.10 387 511 1.3E-20 T 11-11-2016 RB223 756e640ffbcf1d9c4a7c2eddb935e1e3 664 Gene3D G3DSA:3.40.1670.10 558 630 3.9E-4 T 11-11-2016 RB223 756e640ffbcf1d9c4a7c2eddb935e1e3 664 SUPERFAMILY SSF143968 537 655 1.11E-6 T 11-11-2016 RB223 756e640ffbcf1d9c4a7c2eddb935e1e3 664 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 64 488 5.2E-116 T 11-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 RB8789 84bffb200e2da819cee367d097877818 794 SUPERFAMILY SSF69318 317 659 8.9E-37 T 11-11-2016 RB8789 84bffb200e2da819cee367d097877818 794 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 323 393 8.2E-8 T 11-11-2016 RB8789 84bffb200e2da819cee367d097877818 794 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 585 649 1.2E-9 T 11-11-2016 RB8789 84bffb200e2da819cee367d097877818 794 Gene3D G3DSA:2.130.10.130 515 663 8.0E-12 T 11-11-2016 RB8789 84bffb200e2da819cee367d097877818 794 Gene3D G3DSA:2.130.10.130 76 478 3.9E-24 T 11-11-2016 RB11564 fc7f9039e1b20bd4894f793c231443cd 442 Pfam PF12698 ABC-2 family transporter protein 21 432 1.3E-23 T 11-11-2016 RB142 2650d9e31fa65b77ce2367f857a09303 751 Gene3D G3DSA:2.40.50.100 564 602 4.9E-6 T 11-11-2016 RB142 2650d9e31fa65b77ce2367f857a09303 751 Gene3D G3DSA:2.40.50.100 481 511 4.9E-6 T 11-11-2016 RB142 2650d9e31fa65b77ce2367f857a09303 751 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 467 650 1.3E-14 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 332 343 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 270 297 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 132 152 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 91 113 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 228 252 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 206 225 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 155 174 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 299 310 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 PRINTS PR00688 Xylose isomerase signature 179 200 7.2E-91 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 Hamap MF_00455 Xylose isomerase [xylA]. 10 436 54.702 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 SUPERFAMILY SSF51658 4 436 1.07E-165 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB2658 e69d307663c76c6388e54c57a0429492 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 436 7.4E-223 T 11-11-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RB2658 e69d307663c76c6388e54c57a0429492 439 Gene3D G3DSA:3.20.20.150 3 436 1.5E-196 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB2658 e69d307663c76c6388e54c57a0429492 439 Pfam PF01261 Xylose isomerase-like TIM barrel 125 282 1.1E-6 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB3376 e366b7ff9fdf4a2e2e0abc7ccc95d117 690 Gene3D G3DSA:1.10.710.10 227 334 1.3E-31 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB3376 e366b7ff9fdf4a2e2e0abc7ccc95d117 690 Gene3D G3DSA:1.10.710.10 100 142 1.3E-31 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB3376 e366b7ff9fdf4a2e2e0abc7ccc95d117 690 Gene3D G3DSA:1.10.710.10 405 528 1.3E-31 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB3376 e366b7ff9fdf4a2e2e0abc7ccc95d117 690 Pfam PF13435 Cytochrome c554 and c-prime 236 274 0.026 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB3376 e366b7ff9fdf4a2e2e0abc7ccc95d117 690 SUPERFAMILY SSF48695 99 122 5.65E-47 T 11-11-2016 IPR011031 Multihaem cytochrome RB3376 e366b7ff9fdf4a2e2e0abc7ccc95d117 690 SUPERFAMILY SSF48695 234 353 5.65E-47 T 11-11-2016 IPR011031 Multihaem cytochrome RB3376 e366b7ff9fdf4a2e2e0abc7ccc95d117 690 SUPERFAMILY SSF48695 395 654 5.65E-47 T 11-11-2016 IPR011031 Multihaem cytochrome RB3376 e366b7ff9fdf4a2e2e0abc7ccc95d117 690 SUPERFAMILY SSF48695 171 189 5.65E-47 T 11-11-2016 IPR011031 Multihaem cytochrome RB7610 7ca94da962c3baac2d8e5a5275a1ab02 421 Gene3D G3DSA:3.20.20.140 40 80 3.8E-10 T 11-11-2016 RB7610 7ca94da962c3baac2d8e5a5275a1ab02 421 Gene3D G3DSA:3.20.20.140 129 280 3.8E-10 T 11-11-2016 RB7610 7ca94da962c3baac2d8e5a5275a1ab02 421 SUPERFAMILY SSF89550 38 319 7.26E-30 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RB563 98c809781842165db2ba62c9b2a888f1 292 Gene3D G3DSA:3.10.450.50 142 262 1.4E-21 T 11-11-2016 IPR032710 NTF2-like domain RB563 98c809781842165db2ba62c9b2a888f1 292 Gene3D G3DSA:3.30.70.1060 1 117 1.7E-38 T 11-11-2016 RB563 98c809781842165db2ba62c9b2a888f1 292 SUPERFAMILY SSF54909 1 118 3.86E-35 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB563 98c809781842165db2ba62c9b2a888f1 292 Pfam PF03795 YCII-related domain 1 115 3.3E-22 T 11-11-2016 IPR005545 YCII-related RB563 98c809781842165db2ba62c9b2a888f1 292 Pfam PF13474 SnoaL-like domain 146 265 6.0E-17 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain RB563 98c809781842165db2ba62c9b2a888f1 292 SUPERFAMILY SSF54427 140 266 3.37E-26 T 11-11-2016 IPR032710 NTF2-like domain RB264 fceeba67a4c940f997ad862c21b533eb 64 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.6E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB264 fceeba67a4c940f997ad862c21b533eb 64 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.6E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB264 fceeba67a4c940f997ad862c21b533eb 64 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.6E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB264 fceeba67a4c940f997ad862c21b533eb 64 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.6E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB264 fceeba67a4c940f997ad862c21b533eb 64 Pfam PF01165 Ribosomal protein S21 6 56 2.1E-15 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB264 fceeba67a4c940f997ad862c21b533eb 64 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 42 2.0E-8 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB264 fceeba67a4c940f997ad862c21b533eb 64 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 2.1E-12 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB264 fceeba67a4c940f997ad862c21b533eb 64 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.993 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB11958 7dcbf05b2221a6735cc02e7cda02a9c9 302 Gene3D G3DSA:3.40.190.10 118 199 4.7E-9 T 11-11-2016 RB11958 7dcbf05b2221a6735cc02e7cda02a9c9 302 Pfam PF02621 Menaquinone biosynthesis 19 285 2.6E-79 T 11-11-2016 IPR003773 Menaquinone biosynthesis enzyme RB11958 7dcbf05b2221a6735cc02e7cda02a9c9 302 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 18 290 36.797 T 11-11-2016 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 RB11958 7dcbf05b2221a6735cc02e7cda02a9c9 302 SUPERFAMILY SSF53850 19 288 1.65E-66 T 11-11-2016 RB13094 26f02ed3b1003598aed693f15280de50 337 SMART SM00833 253 337 2.0E-12 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RB13094 26f02ed3b1003598aed693f15280de50 337 Gene3D G3DSA:3.40.50.300 4 197 3.1E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13094 26f02ed3b1003598aed693f15280de50 337 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 179 7.1E-35 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RB13094 26f02ed3b1003598aed693f15280de50 337 SUPERFAMILY SSF52540 4 183 8.94E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13094 26f02ed3b1003598aed693f15280de50 337 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 336 1.3E-8 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RB7206 f760c735ce05871aabb8737b8cff28b1 441 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 1 427 3.7E-201 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 RB7206 f760c735ce05871aabb8737b8cff28b1 441 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 1 430 56.368 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 RB7206 f760c735ce05871aabb8737b8cff28b1 441 Pfam PF01964 Radical SAM ThiC family 2 424 7.2E-197 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 RB4156 3a31d391e6bedb1e3e07ec0379988d7e 281 Gene3D G3DSA:3.40.190.10 12 88 2.0E-50 T 11-11-2016 RB4156 3a31d391e6bedb1e3e07ec0379988d7e 281 Gene3D G3DSA:3.40.190.10 185 275 2.0E-50 T 11-11-2016 RB4156 3a31d391e6bedb1e3e07ec0379988d7e 281 Hamap MF_00995 Chorismate dehydratase [mqnA]. 17 272 29.762 T 11-11-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 RB4156 3a31d391e6bedb1e3e07ec0379988d7e 281 SUPERFAMILY SSF53850 15 273 4.13E-67 T 11-11-2016 RB4156 3a31d391e6bedb1e3e07ec0379988d7e 281 Pfam PF02621 Menaquinone biosynthesis 16 267 7.3E-59 T 11-11-2016 IPR003773 Menaquinone biosynthesis enzyme RB4156 3a31d391e6bedb1e3e07ec0379988d7e 281 Gene3D G3DSA:3.40.190.10 89 184 2.3E-23 T 11-11-2016 RB2141 c634c6a8f84b860609ee8cc81f92cded 232 Pfam PF00849 RNA pseudouridylate synthase 30 185 6.5E-30 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2141 c634c6a8f84b860609ee8cc81f92cded 232 SUPERFAMILY SSF55120 20 230 1.6E-46 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB2141 c634c6a8f84b860609ee8cc81f92cded 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 70 84 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 Pfam PF00263 Bacterial type II and III secretion system protein 877 1051 9.2E-42 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 Pfam PF03958 Bacterial type II/III secretion system short domain 211 327 1.0E-6 T 11-11-2016 IPR005644 NolW-like RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 Pfam PF03958 Bacterial type II/III secretion system short domain 408 480 1.5E-15 T 11-11-2016 IPR005644 NolW-like RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 Pfam PF03958 Bacterial type II/III secretion system short domain 488 580 3.4E-13 T 11-11-2016 IPR005644 NolW-like RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 Pfam PF03958 Bacterial type II/III secretion system short domain 587 672 8.2E-9 T 11-11-2016 IPR005644 NolW-like RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 Pfam PF03958 Bacterial type II/III secretion system short domain 680 763 5.9E-10 T 11-11-2016 IPR005644 NolW-like RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 Pfam PF03958 Bacterial type II/III secretion system short domain 336 401 6.8E-9 T 11-11-2016 IPR005644 NolW-like RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 PRINTS PR00811 Bacterial general secretion pathway protein D signature 764 774 5.4E-12 T 11-11-2016 IPR001775 GspD/PilQ family RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 PRINTS PR00811 Bacterial general secretion pathway protein D signature 871 895 5.4E-12 T 11-11-2016 IPR001775 GspD/PilQ family RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 PRINTS PR00811 Bacterial general secretion pathway protein D signature 1039 1053 5.4E-12 T 11-11-2016 IPR001775 GspD/PilQ family RB1545 354a9bdd8996d9bcec7b5531666af35c 1265 PRINTS PR00811 Bacterial general secretion pathway protein D signature 1016 1034 5.4E-12 T 11-11-2016 IPR001775 GspD/PilQ family RB2908 27a429be34683775d493eca5b293f0b7 309 Gene3D G3DSA:3.40.50.150 93 131 4.1E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2908 27a429be34683775d493eca5b293f0b7 309 Gene3D G3DSA:3.40.50.150 163 265 4.1E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2908 27a429be34683775d493eca5b293f0b7 309 Pfam PF13847 Methyltransferase domain 108 262 8.6E-13 T 11-11-2016 IPR025714 Methyltransferase domain RB2908 27a429be34683775d493eca5b293f0b7 309 SUPERFAMILY SSF53335 163 265 1.43E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2908 27a429be34683775d493eca5b293f0b7 309 SUPERFAMILY SSF53335 82 132 1.43E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB7210 986aefc2e9771aad3977ba18ece49cdb 229 Gene3D G3DSA:1.20.58.220 116 221 2.0E-28 T 11-11-2016 RB7210 986aefc2e9771aad3977ba18ece49cdb 229 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 216 1.8E-57 T 11-11-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RB7210 986aefc2e9771aad3977ba18ece49cdb 229 Pfam PF01895 PhoU domain 25 107 4.7E-19 T 11-11-2016 IPR026022 PhoU domain RB7210 986aefc2e9771aad3977ba18ece49cdb 229 Pfam PF01895 PhoU domain 123 207 7.7E-20 T 11-11-2016 IPR026022 PhoU domain RB7210 986aefc2e9771aad3977ba18ece49cdb 229 PIRSF PIRSF003107 2 222 4.2E-60 T 11-11-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RB7210 986aefc2e9771aad3977ba18ece49cdb 229 Gene3D G3DSA:1.20.58.220 5 108 1.1E-27 T 11-11-2016 RB7210 986aefc2e9771aad3977ba18ece49cdb 229 SUPERFAMILY SSF109755 7 221 4.71E-63 T 11-11-2016 RB8432 3fa996c9c84c84a44a6842deab109325 285 SUPERFAMILY SSF69118 77 115 6.26E-36 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB8432 3fa996c9c84c84a44a6842deab109325 285 SUPERFAMILY SSF69118 144 265 6.26E-36 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB8432 3fa996c9c84c84a44a6842deab109325 285 Gene3D G3DSA:1.20.1290.10 92 266 7.1E-30 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB8432 3fa996c9c84c84a44a6842deab109325 285 Pfam PF02627 Carboxymuconolactone decarboxylase family 145 212 9.3E-9 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RB2619 b4fdd9145514882b39fe10c2a7b430bd 277 PIRSF PIRSF005902 6 277 1.2E-75 T 11-11-2016 IPR001130 TatD family GO:0016788 RB2619 b4fdd9145514882b39fe10c2a7b430bd 277 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 210 226 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RB2619 b4fdd9145514882b39fe10c2a7b430bd 277 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 23 31 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RB2619 b4fdd9145514882b39fe10c2a7b430bd 277 SUPERFAMILY SSF51556 23 276 3.63E-78 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB2619 b4fdd9145514882b39fe10c2a7b430bd 277 Pfam PF01026 TatD related DNase 24 275 1.6E-70 T 11-11-2016 IPR001130 TatD family GO:0016788 RB2619 b4fdd9145514882b39fe10c2a7b430bd 277 Gene3D G3DSA:3.20.20.140 17 276 4.9E-85 T 11-11-2016 RB2619 b4fdd9145514882b39fe10c2a7b430bd 277 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 23 275 5.2E-77 T 11-11-2016 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 RB7406 37eb04b041b4a24bf23fa21ba95bb19f 130 Gene3D G3DSA:3.30.70.100 54 124 1.7E-8 T 11-11-2016 RB7406 37eb04b041b4a24bf23fa21ba95bb19f 130 SUPERFAMILY SSF55008 52 124 1.1E-5 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RB4149 5f861f60f341a5a97b697fd75738a2d1 52 Pfam PF07636 PSRT 22 52 2.1E-17 T 11-11-2016 IPR011504 PSRT RB6690 684045059b05049d50f3eb324e8150a6 340 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 333 2.0E-180 T 11-11-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 RB6690 684045059b05049d50f3eb324e8150a6 340 Gene3D G3DSA:3.20.20.70 1 331 2.1E-107 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6690 684045059b05049d50f3eb324e8150a6 340 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 327 3.6E-100 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RB6690 684045059b05049d50f3eb324e8150a6 340 PIRSF PIRSF001359 1 329 4.6E-85 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RB6690 684045059b05049d50f3eb324e8150a6 340 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 327 5.0E-97 T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RB6690 684045059b05049d50f3eb324e8150a6 340 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RB6690 684045059b05049d50f3eb324e8150a6 340 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 11-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RB6690 684045059b05049d50f3eb324e8150a6 340 SUPERFAMILY SSF51569 3 327 2.78E-105 T 11-11-2016 RB2707 14f0e89ca92e60d7f8eea780d75650f3 510 Gene3D G3DSA:3.40.720.10 40 413 2.5E-86 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2707 14f0e89ca92e60d7f8eea780d75650f3 510 SUPERFAMILY SSF53649 40 496 1.17E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2707 14f0e89ca92e60d7f8eea780d75650f3 510 Gene3D G3DSA:3.30.1120.10 439 498 3.7E-11 T 11-11-2016 RB2707 14f0e89ca92e60d7f8eea780d75650f3 510 Pfam PF00884 Sulfatase 42 392 3.9E-51 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB8370 22ec1fc7a6e0fb564f0326e0b7aae944 689 Pfam PF07635 Planctomycete cytochrome C 325 380 1.3E-9 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB8370 22ec1fc7a6e0fb564f0326e0b7aae944 689 SUPERFAMILY SSF46626 315 405 6.04E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8370 22ec1fc7a6e0fb564f0326e0b7aae944 689 Gene3D G3DSA:1.10.760.10 309 329 2.0E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8370 22ec1fc7a6e0fb564f0326e0b7aae944 689 Gene3D G3DSA:1.10.760.10 193 270 2.0E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB10372 4724a11f8013b902e8d804645b1369a7 775 SUPERFAMILY SSF82866 581 766 9.94E-28 T 11-11-2016 RB10372 4724a11f8013b902e8d804645b1369a7 775 SUPERFAMILY SSF82866 180 381 1.83E-19 T 11-11-2016 RB10372 4724a11f8013b902e8d804645b1369a7 775 Pfam PF03176 MMPL family 579 766 4.0E-8 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB10372 4724a11f8013b902e8d804645b1369a7 775 Pfam PF03176 MMPL family 150 390 3.3E-10 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB10372 4724a11f8013b902e8d804645b1369a7 775 Gene3D G3DSA:1.20.1640.10 580 768 8.9E-29 T 11-11-2016 RB10372 4724a11f8013b902e8d804645b1369a7 775 Gene3D G3DSA:1.20.1640.10 183 380 2.1E-16 T 11-11-2016 RB8311 da0658303f0edd846f03e6f6d000f9ec 364 Gene3D G3DSA:3.30.200.20 36 173 8.4E-22 T 11-11-2016 RB8311 da0658303f0edd846f03e6f6d000f9ec 364 SUPERFAMILY SSF56112 38 343 2.63E-65 T 11-11-2016 IPR011009 Protein kinase-like domain RB8311 da0658303f0edd846f03e6f6d000f9ec 364 Pfam PF00069 Protein kinase domain 65 310 6.0E-44 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB8311 da0658303f0edd846f03e6f6d000f9ec 364 Gene3D G3DSA:1.10.510.10 174 355 7.9E-48 T 11-11-2016 RB8311 da0658303f0edd846f03e6f6d000f9ec 364 SMART SM00220 61 320 3.7E-39 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB12055 94d567d9a9335833c372974b03df2362 319 Pfam PF01618 MotA/TolQ/ExbB proton channel family 151 272 6.9E-25 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RB5429 2a572180769010fdf81ff51b5a7dacc0 460 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 44 405 1.0E-118 T 11-11-2016 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type RB5429 2a572180769010fdf81ff51b5a7dacc0 460 Gene3D G3DSA:3.40.50.1820 182 343 7.8E-16 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5429 2a572180769010fdf81ff51b5a7dacc0 460 PIRSF PIRSF014728 52 459 6.2E-72 T 11-11-2016 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type RB5429 2a572180769010fdf81ff51b5a7dacc0 460 SUPERFAMILY SSF53474 181 346 4.53E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 SUPERFAMILY SSF49899 633 847 1.59E-49 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Gene3D G3DSA:2.120.10.30 1024 1270 1.6E-81 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Gene3D G3DSA:2.120.10.30 861 989 1.6E-81 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 SUPERFAMILY SSF50952 1016 1275 6.02E-31 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 SUPERFAMILY SSF50952 861 969 6.02E-31 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 SMART SM00237 508 606 9.3E-21 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Pfam PF16841 Ca-dependent carbohydrate-binding module xylan-binding 260 352 5.4E-22 T 11-11-2016 IPR031768 Carbohydrate binding module, xylan-binding domain MetaCyc: PWY-6784 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Pfam PF16841 Ca-dependent carbohydrate-binding module xylan-binding 390 483 1.1E-19 T 11-11-2016 IPR031768 Carbohydrate binding module, xylan-binding domain MetaCyc: PWY-6784 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Pfam PF00139 Legume lectin domain 633 846 8.4E-38 T 11-11-2016 IPR001220 Legume lectin domain GO:0030246 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Pfam PF03160 Calx-beta domain 519 605 5.5E-19 T 11-11-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Pfam PF07995 Glucose / Sorbosone dehydrogenase 869 1264 3.1E-40 T 11-11-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Pfam PF14252 Domain of unknown function (DUF4347) 95 256 1.4E-50 T 11-11-2016 IPR025592 Domain of unknown function DUF4347 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 SUPERFAMILY SSF141072 516 630 8.5E-34 T 11-11-2016 RB2440 3612e9569a6f705c4245372c3f60a9bc 1277 Gene3D G3DSA:2.60.120.200 633 847 1.7E-49 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5007 568a688996bcd9b6685b88817fc05d6c 298 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 169 272 1.7E-11 T 11-11-2016 IPR005181 Sialate O-acetylesterase domain RB5007 568a688996bcd9b6685b88817fc05d6c 298 SUPERFAMILY SSF52266 63 294 1.16E-65 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB12415 c3ceddee21bb308aafaaded3ff79ebbf 140 Pfam PF04892 VanZ like family 44 119 3.2E-13 T 11-11-2016 IPR006976 VanZ-like RB12464 8b8b1bdbed6d8a1f76486a5c9620dafc 363 Gene3D G3DSA:1.10.287.70 171 322 5.0E-4 T 11-11-2016 RB9506 e9abdc9531c46773d59aa44532585e3e 437 Pfam PF13584 Oxygen tolerance 41 296 3.3E-30 T 11-11-2016 IPR025738 Aerotolerance-related protein BatD RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 Gene3D G3DSA:2.120.10.60 164 378 4.7E-46 T 11-11-2016 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 Gene3D G3DSA:2.120.10.60 467 511 4.7E-46 T 11-11-2016 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 Pfam PF07583 Protein of unknown function (DUF1549) 859 1043 1.0E-47 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 Pfam PF07635 Planctomycete cytochrome C 71 128 1.5E-14 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 Pfam PF07587 Protein of unknown function (DUF1553) 1127 1355 9.3E-43 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 Pfam PF00400 WD domain, G-beta repeat 262 285 0.11 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 SMART SM00320 468 506 160.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 SMART SM00320 291 330 0.005 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 SMART SM00320 203 246 3.5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 SMART SM00320 389 431 8.4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 SMART SM00320 249 288 0.019 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 SMART SM00320 336 377 7.3 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB2226 6d6c08847c0249663fdaa91a5c568eb8 1785 SUPERFAMILY SSF50978 178 443 4.39E-39 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 SUPERFAMILY SSF81271 304 384 3.27E-32 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 48 1.3E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 111 129 1.3E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 50 68 1.3E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 94 109 1.3E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 Pfam PF06071 Protein of unknown function (DUF933) 304 387 4.3E-36 T 11-11-2016 IPR013029 Domain of unknown function DUF933 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 Gene3D G3DSA:3.10.20.30 292 388 1.9E-42 T 11-11-2016 IPR012675 Beta-grasp domain RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 PIRSF PIRSF006641 23 388 1.5E-149 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 25 388 41.93 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 Pfam PF01926 50S ribosome-binding GTPase 28 146 6.7E-23 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 Gene3D G3DSA:1.10.150.300 155 224 1.6E-25 T 11-11-2016 IPR023192 TGS-like domain RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 SUPERFAMILY SSF52540 27 326 7.11E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 Gene3D G3DSA:3.40.50.300 225 291 1.7E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 Gene3D G3DSA:3.40.50.300 27 154 1.7E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5186 95ebc02a2a8357eeb53e7c65ee768862 388 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 26 388 4.0E-144 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RB2482 c0a562383e2fa7d41af88f9843d66482 390 Pfam PF00534 Glycosyl transferases group 1 205 352 1.2E-11 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB2482 c0a562383e2fa7d41af88f9843d66482 390 Gene3D G3DSA:3.40.50.2000 199 351 2.7E-9 T 11-11-2016 RB2482 c0a562383e2fa7d41af88f9843d66482 390 SUPERFAMILY SSF53756 127 370 2.38E-31 T 11-11-2016 RB12945 81d853d47e4910ccb0e1ee5769759ce5 142 Pfam PF00472 RF-1 domain 9 135 3.3E-22 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RB12945 81d853d47e4910ccb0e1ee5769759ce5 142 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 23 39 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RB12945 81d853d47e4910ccb0e1ee5769759ce5 142 SUPERFAMILY SSF110916 16 99 3.14E-16 T 11-11-2016 RB12945 81d853d47e4910ccb0e1ee5769759ce5 142 Gene3D G3DSA:3.30.160.200 7 110 6.1E-27 T 11-11-2016 RB9627 7071e35200508fd703635a360b4fdea4 487 Pfam PF13692 Glycosyl transferases group 1 300 440 1.0E-12 T 11-11-2016 RB9627 7071e35200508fd703635a360b4fdea4 487 SUPERFAMILY SSF53756 93 474 8.9E-38 T 11-11-2016 RB9627 7071e35200508fd703635a360b4fdea4 487 Gene3D G3DSA:3.40.50.2000 279 415 2.1E-10 T 11-11-2016 RB488 03790e5975d2ac5422295c24e4175001 877 Pfam PF07587 Protein of unknown function (DUF1553) 620 846 1.8E-43 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB488 03790e5975d2ac5422295c24e4175001 877 Pfam PF07583 Protein of unknown function (DUF1549) 384 567 4.0E-42 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB8547 ea9bfa3e5515898abdcb536373e14a6b 368 Pfam PF00557 Metallopeptidase family M24 142 348 2.7E-57 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB8547 ea9bfa3e5515898abdcb536373e14a6b 368 Gene3D G3DSA:3.40.350.10 1 132 5.0E-23 T 11-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RB8547 ea9bfa3e5515898abdcb536373e14a6b 368 Gene3D G3DSA:3.90.230.10 133 364 3.0E-70 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB8547 ea9bfa3e5515898abdcb536373e14a6b 368 SUPERFAMILY SSF53092 1 132 5.49E-20 T 11-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RB8547 ea9bfa3e5515898abdcb536373e14a6b 368 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 134 1.7E-25 T 11-11-2016 IPR000587 Creatinase, N-terminal GO:0016787 RB8547 ea9bfa3e5515898abdcb536373e14a6b 368 SUPERFAMILY SSF55920 88 359 6.8E-67 T 11-11-2016 IPR000994 Peptidase M24, structural domain RB10170 48910ebd50080db3033f51c379500746 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 296 7.5E-56 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB10170 48910ebd50080db3033f51c379500746 323 Gene3D G3DSA:3.40.50.1100 150 313 1.1E-39 T 11-11-2016 RB10170 48910ebd50080db3033f51c379500746 323 Gene3D G3DSA:3.40.50.1100 16 43 1.1E-39 T 11-11-2016 RB10170 48910ebd50080db3033f51c379500746 323 Gene3D G3DSA:3.40.50.1100 44 140 8.7E-31 T 11-11-2016 RB10170 48910ebd50080db3033f51c379500746 323 SUPERFAMILY SSF53686 15 304 9.56E-68 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB5670 afba25f9598373e21171907e50bd9b34 114 SMART SM00450 12 109 1.9E-20 T 11-11-2016 IPR001763 Rhodanese-like domain RB5670 afba25f9598373e21171907e50bd9b34 114 Pfam PF00581 Rhodanese-like domain 13 105 6.9E-17 T 11-11-2016 IPR001763 Rhodanese-like domain RB5670 afba25f9598373e21171907e50bd9b34 114 Gene3D G3DSA:3.40.250.10 10 113 9.1E-29 T 11-11-2016 IPR001763 Rhodanese-like domain RB5670 afba25f9598373e21171907e50bd9b34 114 SUPERFAMILY SSF52821 10 111 9.43E-30 T 11-11-2016 IPR001763 Rhodanese-like domain RB9569 81bc223356b5e1a0fdf904a094ddff3c 210 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 70 117 7.5E-14 T 11-11-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RB9569 81bc223356b5e1a0fdf904a094ddff3c 210 Pfam PF02627 Carboxymuconolactone decarboxylase family 54 131 1.8E-16 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RB9569 81bc223356b5e1a0fdf904a094ddff3c 210 SUPERFAMILY SSF69118 13 186 1.34E-49 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB9569 81bc223356b5e1a0fdf904a094ddff3c 210 Gene3D G3DSA:1.20.1290.10 149 187 1.6E-39 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB9569 81bc223356b5e1a0fdf904a094ddff3c 210 Gene3D G3DSA:1.20.1290.10 13 100 1.6E-39 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB10224 deb51d7fabee95a6dd5687ceb50d2525 203 Gene3D G3DSA:3.30.70.1290 136 165 4.8E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB10224 deb51d7fabee95a6dd5687ceb50d2525 203 Gene3D G3DSA:3.30.70.1290 46 83 4.8E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB10224 deb51d7fabee95a6dd5687ceb50d2525 203 SUPERFAMILY SSF143422 135 166 5.36E-10 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB10224 deb51d7fabee95a6dd5687ceb50d2525 203 SUPERFAMILY SSF143422 17 82 5.36E-10 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB3742 152734794a593f0f86947eac3ce35a8b 718 Pfam PF07196 Flagellin hook IN motif 450 498 5.2E-5 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 RB3742 152734794a593f0f86947eac3ce35a8b 718 PRINTS PR00207 Flagellin signature 112 131 1.5E-11 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB3742 152734794a593f0f86947eac3ce35a8b 718 PRINTS PR00207 Flagellin signature 148 171 1.5E-11 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB3742 152734794a593f0f86947eac3ce35a8b 718 PRINTS PR00207 Flagellin signature 73 90 1.5E-11 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 RB3742 152734794a593f0f86947eac3ce35a8b 718 Pfam PF00669 Bacterial flagellin N-terminal helical region 41 179 1.0E-29 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB3742 152734794a593f0f86947eac3ce35a8b 718 Pfam PF00700 Bacterial flagellin C-terminal helical region 632 717 2.3E-18 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB3742 152734794a593f0f86947eac3ce35a8b 718 Gene3D G3DSA:1.20.1330.10 90 177 2.3E-12 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB3742 152734794a593f0f86947eac3ce35a8b 718 Gene3D G3DSA:1.20.1330.10 484 485 2.3E-12 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB3742 152734794a593f0f86947eac3ce35a8b 718 Gene3D G3DSA:1.20.1330.10 619 674 2.3E-12 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 RB3742 152734794a593f0f86947eac3ce35a8b 718 SUPERFAMILY SSF64518 38 406 1.01E-44 T 11-11-2016 RB3742 152734794a593f0f86947eac3ce35a8b 718 SUPERFAMILY SSF64518 367 717 1.7E-21 T 11-11-2016 RB3681 b598d57da72f24631d06d6016b0845bf 231 Pfam PF13649 Methyltransferase domain 53 146 1.3E-12 T 11-11-2016 RB3681 b598d57da72f24631d06d6016b0845bf 231 Gene3D G3DSA:3.40.50.150 25 229 4.3E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB3681 b598d57da72f24631d06d6016b0845bf 231 SUPERFAMILY SSF53335 20 227 5.14E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB1708 77ca8f501bfddca02a13ab9ea95b1901 482 Pfam PF00772 DnaB-like helicase N terminal domain 29 129 4.7E-25 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RB1708 77ca8f501bfddca02a13ab9ea95b1901 482 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 30 463 2.3E-149 T 11-11-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RB1708 77ca8f501bfddca02a13ab9ea95b1901 482 Gene3D G3DSA:3.40.50.300 188 463 2.7E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1708 77ca8f501bfddca02a13ab9ea95b1901 482 SUPERFAMILY SSF48024 27 138 1.44E-27 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RB1708 77ca8f501bfddca02a13ab9ea95b1901 482 Pfam PF03796 DnaB-like helicase C terminal domain 203 461 1.4E-102 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 RB1708 77ca8f501bfddca02a13ab9ea95b1901 482 SUPERFAMILY SSF52540 204 454 1.36E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1708 77ca8f501bfddca02a13ab9ea95b1901 482 Gene3D G3DSA:1.10.860.10 29 130 3.8E-26 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RB1708 77ca8f501bfddca02a13ab9ea95b1901 482 SMART SM00382 220 418 2.3E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10581 70676e4686f6aea735549ec9af6d6ee8 384 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB10581 70676e4686f6aea735549ec9af6d6ee8 384 SUPERFAMILY SSF54523 13 156 1.49E-27 T 11-11-2016 RB10581 70676e4686f6aea735549ec9af6d6ee8 384 Gene3D G3DSA:3.30.700.10 13 71 3.9E-6 T 11-11-2016 RB10581 70676e4686f6aea735549ec9af6d6ee8 384 Pfam PF13633 Prokaryotic N-terminal methylation site 11 36 5.4E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB10581 70676e4686f6aea735549ec9af6d6ee8 384 Pfam PF07596 Protein of unknown function (DUF1559) 37 346 5.2E-70 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB10581 70676e4686f6aea735549ec9af6d6ee8 384 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 1.0E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB6620 4ce35ef9d7a3450ee376c2119f88c389 395 SUPERFAMILY SSF109998 60 236 5.1E-5 T 11-11-2016 IPR027304 Trigger factor/SurA domain RB6620 4ce35ef9d7a3450ee376c2119f88c389 395 Pfam PF13145 PPIC-type PPIASE domain 212 337 2.0E-10 T 11-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RB6620 4ce35ef9d7a3450ee376c2119f88c389 395 SUPERFAMILY SSF54534 233 332 2.29E-13 T 11-11-2016 RB6620 4ce35ef9d7a3450ee376c2119f88c389 395 Gene3D G3DSA:3.10.50.40 223 353 8.7E-19 T 11-11-2016 RB2936 98b20fbaa9f24253c206ebd6f2cf2406 74 Pfam PF12796 Ankyrin repeats (3 copies) 29 73 3.4E-6 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB2936 98b20fbaa9f24253c206ebd6f2cf2406 74 SUPERFAMILY SSF48403 28 74 6.68E-10 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB2936 98b20fbaa9f24253c206ebd6f2cf2406 74 Gene3D G3DSA:1.25.40.20 29 73 1.4E-10 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB2936 98b20fbaa9f24253c206ebd6f2cf2406 74 SMART SM00248 29 58 3.4E-4 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB1874 0b5ee3869b72126e4384df49d6ce0a0f 327 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 168 1.5E-27 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RB1874 0b5ee3869b72126e4384df49d6ce0a0f 327 Gene3D G3DSA:3.30.70.560 4 188 1.3E-39 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RB1874 0b5ee3869b72126e4384df49d6ce0a0f 327 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 106 117 - T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RB1874 0b5ee3869b72126e4384df49d6ce0a0f 327 SUPERFAMILY SSF55083 4 187 6.28E-33 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RB1874 0b5ee3869b72126e4384df49d6ce0a0f 327 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 46 168 2.1E-21 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RB8980 c7121c9afb4b0c7be2b34e06c36ea102 618 Pfam PF07596 Protein of unknown function (DUF1559) 414 496 5.6E-30 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8980 c7121c9afb4b0c7be2b34e06c36ea102 618 Pfam PF07596 Protein of unknown function (DUF1559) 568 601 1.9E-6 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8980 c7121c9afb4b0c7be2b34e06c36ea102 618 Pfam PF07596 Protein of unknown function (DUF1559) 505 562 1.7E-5 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8980 c7121c9afb4b0c7be2b34e06c36ea102 618 SUPERFAMILY SSF54523 403 491 8.63E-9 T 11-11-2016 RB11262 61c0fff73799d7e54cb0a79e309b3bdd 331 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 63 311 2.3E-38 T 11-11-2016 IPR005218 Diacylglycerol/lipid kinase RB11262 61c0fff73799d7e54cb0a79e309b3bdd 331 Pfam PF00781 Diacylglycerol kinase catalytic domain 28 141 5.4E-16 T 11-11-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RB11262 61c0fff73799d7e54cb0a79e309b3bdd 331 SUPERFAMILY SSF111331 20 313 8.94E-54 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RB638 944cf26420802c0c2753e0cf4467b734 436 SMART SM00564 142 172 54.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB638 944cf26420802c0c2753e0cf4467b734 436 SMART SM00564 187 221 42.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB638 944cf26420802c0c2753e0cf4467b734 436 SMART SM00564 80 118 54.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB638 944cf26420802c0c2753e0cf4467b734 436 Gene3D G3DSA:2.140.10.10 214 433 3.5E-27 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB638 944cf26420802c0c2753e0cf4467b734 436 Gene3D G3DSA:2.140.10.10 27 213 2.7E-30 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB638 944cf26420802c0c2753e0cf4467b734 436 Pfam PF13360 PQQ-like domain 63 120 1.8E-4 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB638 944cf26420802c0c2753e0cf4467b734 436 Pfam PF13360 PQQ-like domain 139 352 3.4E-20 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB638 944cf26420802c0c2753e0cf4467b734 436 SUPERFAMILY SSF50998 36 432 5.16E-52 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB1685 7445371c4bad4a8efe316c8370301b9e 432 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 217 401 1.8E-15 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB1685 7445371c4bad4a8efe316c8370301b9e 432 Gene3D G3DSA:2.40.50.100 293 328 1.8E-7 T 11-11-2016 RB1685 7445371c4bad4a8efe316c8370301b9e 432 Gene3D G3DSA:2.40.50.100 207 237 1.8E-7 T 11-11-2016 RB1685 7445371c4bad4a8efe316c8370301b9e 432 SUPERFAMILY SSF111369 199 402 4.97E-8 T 11-11-2016 RB9359 4d32d98828cc42ee57f4a72a389e420b 365 Gene3D G3DSA:3.30.360.20 191 277 8.3E-24 T 11-11-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain RB9359 4d32d98828cc42ee57f4a72a389e420b 365 Pfam PF01137 RNA 3'-terminal phosphate cyclase 14 333 4.5E-71 T 11-11-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain RB9359 4d32d98828cc42ee57f4a72a389e420b 365 SUPERFAMILY SSF52913 187 281 1.12E-19 T 11-11-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain RB9359 4d32d98828cc42ee57f4a72a389e420b 365 Gene3D G3DSA:3.65.10.20 5 179 9.0E-78 T 11-11-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain RB9359 4d32d98828cc42ee57f4a72a389e420b 365 Gene3D G3DSA:3.65.10.20 278 341 9.0E-78 T 11-11-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain RB9359 4d32d98828cc42ee57f4a72a389e420b 365 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 159 169 - T 11-11-2016 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site RB9359 4d32d98828cc42ee57f4a72a389e420b 365 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 6 346 34.509 T 11-11-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 RB9359 4d32d98828cc42ee57f4a72a389e420b 365 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 7 333 1.0E-97 T 11-11-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 RB9359 4d32d98828cc42ee57f4a72a389e420b 365 PIRSF PIRSF005378 3 356 7.3E-90 T 11-11-2016 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 RB9359 4d32d98828cc42ee57f4a72a389e420b 365 SUPERFAMILY SSF55205 6 185 6.47E-58 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RB5255 b043c43a8202c0b7c627b866375e5269 500 Pfam PF07394 Protein of unknown function (DUF1501) 94 499 5.4E-110 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB5255 b043c43a8202c0b7c627b866375e5269 500 SUPERFAMILY SSF53649 313 479 3.66E-11 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB621 445bfd412fb1a82512446c786659043d 191 Gene3D G3DSA:1.10.10.10 127 189 1.4E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB621 445bfd412fb1a82512446c786659043d 191 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 7 189 4.8E-66 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB621 445bfd412fb1a82512446c786659043d 191 SUPERFAMILY SSF88659 126 188 7.66E-9 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB621 445bfd412fb1a82512446c786659043d 191 Pfam PF07638 ECF sigma factor 7 190 1.7E-78 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB621 445bfd412fb1a82512446c786659043d 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 3.5E-17 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4880 7e9fc46265a0204024979e7962ce1d16 534 SUPERFAMILY SSF53649 55 486 4.07E-125 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB4880 7e9fc46265a0204024979e7962ce1d16 534 Gene3D G3DSA:3.30.1120.10 416 486 1.0E-16 T 11-11-2016 RB4880 7e9fc46265a0204024979e7962ce1d16 534 ProSitePatterns PS00149 Sulfatases signature 2. 145 155 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB4880 7e9fc46265a0204024979e7962ce1d16 534 ProSitePatterns PS00523 Sulfatases signature 1. 103 115 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB4880 7e9fc46265a0204024979e7962ce1d16 534 Pfam PF00884 Sulfatase 57 387 1.2E-70 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB4880 7e9fc46265a0204024979e7962ce1d16 534 Pfam PF16347 Domain of unknown function (DUF4976) 391 484 4.5E-20 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB4880 7e9fc46265a0204024979e7962ce1d16 534 Gene3D G3DSA:3.40.720.10 56 403 2.0E-105 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB11919 f30828fcdbb3f6161de0fb3d21b3c8fc 671 SUPERFAMILY SSF52016 444 642 3.3E-37 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RB11919 f30828fcdbb3f6161de0fb3d21b3c8fc 671 TIGRFAM TIGR03432 yjhG_yagF: putative dehydratase, YjhG/YagF family 20 649 0.0 T 11-11-2016 IPR017798 Dehydratase YjhG/YagF RB11919 f30828fcdbb3f6161de0fb3d21b3c8fc 671 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 166 176 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB11919 f30828fcdbb3f6161de0fb3d21b3c8fc 671 Pfam PF00920 Dehydratase family 90 588 3.4E-107 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB11919 f30828fcdbb3f6161de0fb3d21b3c8fc 671 SUPERFAMILY SSF143975 88 426 1.22E-82 T 11-11-2016 RB11919 f30828fcdbb3f6161de0fb3d21b3c8fc 671 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 536 547 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 SUPERFAMILY SSF50952 376 439 2.09E-13 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 SUPERFAMILY SSF50952 85 324 2.09E-13 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 SUPERFAMILY SSF46626 957 1012 1.35E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 SUPERFAMILY SSF46626 1064 1088 1.35E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 TIGRFAM TIGR02604 Piru_Ver_Nterm: putative membrane-bound dehydrogenase domain 98 462 6.7E-109 T 11-11-2016 IPR013428 Putative membrane-bound dehydrogenase RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 TIGRFAM TIGR02603 CxxCH_TIGR02603: putative heme-binding domain 958 1088 1.3E-29 T 11-11-2016 IPR013427 Haem-binding domain, putative RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 Gene3D G3DSA:1.10.760.10 950 1007 2.6E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 Gene3D G3DSA:1.10.760.10 1061 1088 2.6E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 Gene3D G3DSA:2.120.10.30 93 471 3.1E-32 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB2711 44653849bc5d90a1c8a17086bcb31d41 1098 Pfam PF00034 Cytochrome c 962 1088 2.0E-8 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB10028 407aeb9ed4fa4d05b637f46ced23526a 348 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 33 342 1.6E-92 T 11-11-2016 IPR007296 Domain of unknown function DUF403 RB2645 8ccceac29f827782cdc87adc83a45e19 257 Pfam PF04055 Radical SAM superfamily 53 132 1.4E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB2645 8ccceac29f827782cdc87adc83a45e19 257 Pfam PF13394 4Fe-4S single cluster domain 51 132 1.4E-13 T 11-11-2016 RB2645 8ccceac29f827782cdc87adc83a45e19 257 Gene3D G3DSA:3.20.20.70 55 239 7.6E-22 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB2645 8ccceac29f827782cdc87adc83a45e19 257 SUPERFAMILY SSF102114 51 141 4.45E-21 T 11-11-2016 RB2645 8ccceac29f827782cdc87adc83a45e19 257 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 30 254 41.052 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 RB5135 6d8c5457e802ed257fac7f341e0c9463 137 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 2 107 8.8E-27 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RB5135 6d8c5457e802ed257fac7f341e0c9463 137 SUPERFAMILY SSF55620 2 135 2.67E-36 T 11-11-2016 RB5135 6d8c5457e802ed257fac7f341e0c9463 137 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 135 7.5E-35 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RB5135 6d8c5457e802ed257fac7f341e0c9463 137 Gene3D G3DSA:3.30.479.10 2 135 2.2E-36 T 11-11-2016 RB10397 9336e514d51dcc8b07e06b581f395b4f 314 Gene3D G3DSA:3.40.192.10 11 70 1.1E-4 T 11-11-2016 RB10397 9336e514d51dcc8b07e06b581f395b4f 314 SUPERFAMILY SSF53223 7 84 1.9E-8 T 11-11-2016 RB1885 031c8a08172ebfb46223d238c61cdff7 293 SUPERFAMILY SSF53335 45 292 3.88E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB1885 031c8a08172ebfb46223d238c61cdff7 293 Gene3D G3DSA:3.40.50.150 232 275 1.3E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB1885 031c8a08172ebfb46223d238c61cdff7 293 Gene3D G3DSA:3.40.50.150 39 181 1.3E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB1885 031c8a08172ebfb46223d238c61cdff7 293 Pfam PF13649 Methyltransferase domain 77 172 1.5E-13 T 11-11-2016 RB3932 df3cc613a2b27cd0816f8709137456c8 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 115 234 3.9E-31 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RB763 0016b4944a6c8c0c54d80048ee282c88 745 Gene3D G3DSA:3.40.720.10 307 672 5.9E-90 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB763 0016b4944a6c8c0c54d80048ee282c88 745 Pfam PF00884 Sulfatase 309 651 4.1E-52 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB763 0016b4944a6c8c0c54d80048ee282c88 745 SUPERFAMILY SSF53649 307 742 3.49E-110 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB763 0016b4944a6c8c0c54d80048ee282c88 745 SUPERFAMILY SSF52266 44 293 3.2E-46 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB763 0016b4944a6c8c0c54d80048ee282c88 745 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 181 236 7.3E-8 T 11-11-2016 IPR005181 Sialate O-acetylesterase domain RB763 0016b4944a6c8c0c54d80048ee282c88 745 Gene3D G3DSA:3.30.1120.10 681 740 7.1E-14 T 11-11-2016 RB8265 00751317befcff67e2dadd6947335c28 141 Pfam PF13279 Thioesterase-like superfamily 25 139 3.2E-16 T 11-11-2016 RB8265 00751317befcff67e2dadd6947335c28 141 SUPERFAMILY SSF54637 18 140 2.04E-39 T 11-11-2016 IPR029069 HotDog domain RB8265 00751317befcff67e2dadd6947335c28 141 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 22 128 4.7E-29 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RB8265 00751317befcff67e2dadd6947335c28 141 Gene3D G3DSA:3.10.129.10 18 139 1.9E-43 T 11-11-2016 IPR029069 HotDog domain RB8265 00751317befcff67e2dadd6947335c28 141 PIRSF PIRSF003230 9 141 2.0E-48 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RB10124 616a613f33ff9c5bcbdb95570438f39f 482 Pfam PF13360 PQQ-like domain 144 397 3.5E-21 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB10124 616a613f33ff9c5bcbdb95570438f39f 482 SMART SM00564 179 210 20.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10124 616a613f33ff9c5bcbdb95570438f39f 482 SMART SM00564 365 399 220.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10124 616a613f33ff9c5bcbdb95570438f39f 482 SMART SM00564 228 260 1.6 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10124 616a613f33ff9c5bcbdb95570438f39f 482 SUPERFAMILY SSF50998 75 432 2.35E-50 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB10124 616a613f33ff9c5bcbdb95570438f39f 482 Gene3D G3DSA:2.140.10.10 58 480 1.2E-54 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB12305 6dc7e4fe9f876f73ede21e64f6c2b4e0 463 Gene3D G3DSA:2.60.120.360 46 159 2.8E-6 T 11-11-2016 RB12305 6dc7e4fe9f876f73ede21e64f6c2b4e0 463 Pfam PF11721 Di-glucose binding within endoplasmic reticulum 32 153 9.9E-25 T 11-11-2016 IPR021720 Malectin Reactome: R-HSA-532668 RB12586 f36ff785d0b2ab681690a680737c8965 213 Pfam PF14499 Domain of unknown function (DUF4437) 1 210 1.1E-82 T 11-11-2016 IPR028013 Protein of unknown function DUF4437 RB12586 f36ff785d0b2ab681690a680737c8965 213 SUPERFAMILY SSF51182 3 198 5.35E-13 T 11-11-2016 IPR011051 RmlC-like cupin domain RB12586 f36ff785d0b2ab681690a680737c8965 213 Gene3D G3DSA:2.60.120.10 1 88 6.0E-11 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB12586 f36ff785d0b2ab681690a680737c8965 213 Gene3D G3DSA:2.60.120.10 99 207 8.9E-6 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB46 a905e64c92d0a2017e58c678073bf914 275 SUPERFAMILY SSF50494 27 269 3.23E-13 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB46 a905e64c92d0a2017e58c678073bf914 275 Pfam PF13365 Trypsin-like peptidase domain 70 231 3.4E-7 T 11-11-2016 RB46 a905e64c92d0a2017e58c678073bf914 275 Gene3D G3DSA:2.40.10.10 163 268 1.1E-4 T 11-11-2016 RB1154 b86b92f5951e1012417b89ca3c817dd6 157 Pfam PF07811 TadE-like protein 18 60 1.7E-8 T 11-11-2016 IPR012495 TadE-like RB1436 ec965f433cbdde339756ef03fadc26fa 120 Pfam PF03334 Na+/H+ antiporter subunit 11 89 6.3E-22 T 11-11-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 RB1436 ec965f433cbdde339756ef03fadc26fa 120 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 97 1.4E-20 T 11-11-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 RB4136 4d667d104f782853f890c495a2798081 146 SMART SM00448 20 134 4.1E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB4136 4d667d104f782853f890c495a2798081 146 Gene3D G3DSA:3.40.50.2300 17 139 1.6E-29 T 11-11-2016 RB4136 4d667d104f782853f890c495a2798081 146 SUPERFAMILY SSF52172 15 140 1.85E-27 T 11-11-2016 IPR011006 CheY-like superfamily RB4136 4d667d104f782853f890c495a2798081 146 Pfam PF00072 Response regulator receiver domain 23 132 1.8E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB6904 52ec2a64a77936fb8bc346d22f57980b 433 Pfam PF07586 Protein of unknown function (DUF1552) 51 335 4.3E-77 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB3788 9d662355de9c2632d5e77680f2373bec 358 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB3788 9d662355de9c2632d5e77680f2373bec 358 SUPERFAMILY SSF52540 25 249 2.81E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3788 9d662355de9c2632d5e77680f2373bec 358 SMART SM00382 57 238 3.2E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3788 9d662355de9c2632d5e77680f2373bec 358 Pfam PF00005 ABC transporter 48 189 2.1E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB3788 9d662355de9c2632d5e77680f2373bec 358 Gene3D G3DSA:3.40.50.300 20 250 1.9E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11693 4a1258ced299dc8d9aca3ff648ff1afd 301 Gene3D G3DSA:3.40.1390.30 18 129 5.3E-42 T 11-11-2016 RB11693 4a1258ced299dc8d9aca3ff648ff1afd 301 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 20 269 1.6E-53 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RB11693 4a1258ced299dc8d9aca3ff648ff1afd 301 Gene3D G3DSA:3.40.1390.30 130 238 2.8E-29 T 11-11-2016 RB11693 4a1258ced299dc8d9aca3ff648ff1afd 301 SUPERFAMILY SSF102705 18 260 4.58E-77 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RB11693 4a1258ced299dc8d9aca3ff648ff1afd 301 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 22 258 9.2E-85 T 11-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RB983 6fbf175dfe23d79831cbd0179853fd7b 425 Gene3D G3DSA:2.140.10.10 1 411 3.9E-54 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB983 6fbf175dfe23d79831cbd0179853fd7b 425 Pfam PF13360 PQQ-like domain 98 267 2.9E-16 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB983 6fbf175dfe23d79831cbd0179853fd7b 425 Pfam PF13360 PQQ-like domain 288 371 2.1E-7 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB983 6fbf175dfe23d79831cbd0179853fd7b 425 SUPERFAMILY SSF50998 24 381 3.14E-54 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB5162 6ad14a69e8b5af90054d16f809dbc1fd 392 Gene3D G3DSA:1.20.120.450 238 377 5.8E-4 T 11-11-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RB5162 6ad14a69e8b5af90054d16f809dbc1fd 392 SUPERFAMILY SSF109854 225 376 1.41E-8 T 11-11-2016 RB7762 40003408047ddf991ebca27d00a1df64 992 Pfam PF07583 Protein of unknown function (DUF1549) 205 414 1.2E-76 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB7762 40003408047ddf991ebca27d00a1df64 992 Pfam PF07587 Protein of unknown function (DUF1553) 706 958 4.2E-73 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB7762 40003408047ddf991ebca27d00a1df64 992 Pfam PF07635 Planctomycete cytochrome C 80 138 1.5E-16 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB13024 d2f832abae611f0994c866cb3eff75bc 140 Pfam PF12570 Protein of unknown function (DUF3750) 9 134 2.2E-30 T 11-11-2016 IPR022224 Protein of unknown function DUF3750 RB7987 fecdeaa5196c8d5f60bbc73930436f60 369 Pfam PF07635 Planctomycete cytochrome C 103 163 1.2E-19 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB7987 fecdeaa5196c8d5f60bbc73930436f60 369 SUPERFAMILY SSF46626 74 185 9.42E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB7987 fecdeaa5196c8d5f60bbc73930436f60 369 Pfam PF07583 Protein of unknown function (DUF1549) 212 347 2.0E-57 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB11337 23c9cb4674a5f3951a162d71cdbfd006 289 Pfam PF01609 Transposase DDE domain 121 280 1.6E-15 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB11337 23c9cb4674a5f3951a162d71cdbfd006 289 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 26 101 2.8E-19 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family RB8484 08f5f244a3b421444e2c81f89248be14 115 Gene3D G3DSA:3.30.70.1060 3 108 1.3E-25 T 11-11-2016 RB8484 08f5f244a3b421444e2c81f89248be14 115 SUPERFAMILY SSF54909 3 107 6.17E-23 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB8484 08f5f244a3b421444e2c81f89248be14 115 Pfam PF03795 YCII-related domain 12 106 3.0E-12 T 11-11-2016 IPR005545 YCII-related RB4347 93be8f9f4a120d2cb5744524e6f88a97 156 Pfam PF09537 Domain of unknown function (DUF2383) 13 122 1.6E-33 T 11-11-2016 IPR019052 Domain of unknown function DUF2383 RB4347 93be8f9f4a120d2cb5744524e6f88a97 156 PIRSF PIRSF029477 6 156 2.7E-66 T 11-11-2016 IPR016920 Uncharacterised conserved protein UCP029477 RB4347 93be8f9f4a120d2cb5744524e6f88a97 156 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 13 150 1.8E-63 T 11-11-2016 IPR011971 Conserved hypothetical protein CHP02284 RB4347 93be8f9f4a120d2cb5744524e6f88a97 156 Gene3D G3DSA:1.20.1260.10 10 133 9.0E-5 T 11-11-2016 IPR012347 Ferritin-related RB1696 a2a5f6e533eb2f5ec1bf94c6e7944771 494 Pfam PF00809 Pterin binding enzyme 143 222 5.9E-7 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB1696 a2a5f6e533eb2f5ec1bf94c6e7944771 494 SUPERFAMILY SSF51717 141 348 9.29E-31 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB1696 a2a5f6e533eb2f5ec1bf94c6e7944771 494 Gene3D G3DSA:3.20.20.20 144 305 6.2E-9 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RB3423 865544da466c5374bd06d54e99b2b1f8 469 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RB3423 865544da466c5374bd06d54e99b2b1f8 469 SUPERFAMILY SSF52777 230 467 7.31E-81 T 11-11-2016 RB3423 865544da466c5374bd06d54e99b2b1f8 469 Pfam PF00364 Biotin-requiring enzyme 3 74 6.2E-18 T 11-11-2016 IPR000089 Biotin/lipoyl attachment RB3423 865544da466c5374bd06d54e99b2b1f8 469 Gene3D G3DSA:4.10.320.10 153 202 1.2E-17 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RB3423 865544da466c5374bd06d54e99b2b1f8 469 Gene3D G3DSA:2.40.50.100 1 95 1.6E-22 T 11-11-2016 RB3423 865544da466c5374bd06d54e99b2b1f8 469 SUPERFAMILY SSF51230 2 94 4.58E-23 T 11-11-2016 IPR011053 Single hybrid motif RB3423 865544da466c5374bd06d54e99b2b1f8 469 Gene3D G3DSA:3.30.559.10 232 467 8.0E-84 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 RB3423 865544da466c5374bd06d54e99b2b1f8 469 SUPERFAMILY SSF47005 149 195 7.85E-12 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RB3423 865544da466c5374bd06d54e99b2b1f8 469 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 239 467 8.0E-82 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RB3423 865544da466c5374bd06d54e99b2b1f8 469 Pfam PF02817 e3 binding domain 156 191 1.4E-13 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RB3612 cad6f7745d5c670d119ff58cfe486622 271 Pfam PF04982 HPP family 49 170 1.3E-39 T 11-11-2016 IPR007065 HPP RB13224 086ca3ab1396104e95c7488bb1f151bb 485 Pfam PF13460 NAD(P)H-binding 15 125 6.3E-17 T 11-11-2016 IPR016040 NAD(P)-binding domain RB13224 086ca3ab1396104e95c7488bb1f151bb 485 SUPERFAMILY SSF55961 337 484 2.0E-10 T 11-11-2016 RB13224 086ca3ab1396104e95c7488bb1f151bb 485 Pfam PF11066 Protein of unknown function (DUF2867) 330 475 1.1E-30 T 11-11-2016 IPR021295 Protein of unknown function DUF2867 RB13224 086ca3ab1396104e95c7488bb1f151bb 485 Gene3D G3DSA:3.40.50.720 3 232 1.0E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB13224 086ca3ab1396104e95c7488bb1f151bb 485 SUPERFAMILY SSF51735 9 247 1.18E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1095 b621eaf6d10d87d4998ae9d6e255743f 525 SUPERFAMILY SSF48239 174 421 9.68E-31 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB1095 b621eaf6d10d87d4998ae9d6e255743f 525 SUPERFAMILY SSF48239 461 512 9.68E-31 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB1095 b621eaf6d10d87d4998ae9d6e255743f 525 Gene3D G3DSA:1.50.10.20 178 427 7.5E-23 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9591 4672c0539c69582779ca216402408d7d 314 Pfam PF10127 Predicted nucleotidyltransferase 64 303 2.0E-66 T 11-11-2016 IPR018775 Nucleotidyltransferase, predicted RB9660 fc1e661ca3c4e68d0ff691418aad662e 153 PIRSF PIRSF030066 1 150 8.2E-75 T 11-11-2016 IPR016944 Uncharacterised conserved protein UCP030066 RB9660 fc1e661ca3c4e68d0ff691418aad662e 153 Pfam PF13564 DoxX-like family 24 122 3.2E-22 T 11-11-2016 IPR032808 DoxX family RB4260 6dbed3018dfd9a1127ce0e31ed6a33c2 262 Pfam PF06271 RDD family 126 253 3.7E-14 T 11-11-2016 IPR010432 RDD RB7481 f376eb1b0eb3e6d1c860214e4a4a2a49 529 ProSitePatterns PS00523 Sulfatases signature 1. 91 103 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB7481 f376eb1b0eb3e6d1c860214e4a4a2a49 529 SUPERFAMILY SSF53649 42 524 9.3E-120 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7481 f376eb1b0eb3e6d1c860214e4a4a2a49 529 Pfam PF00884 Sulfatase 45 416 2.6E-68 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB7481 f376eb1b0eb3e6d1c860214e4a4a2a49 529 ProSitePatterns PS00149 Sulfatases signature 2. 138 148 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB7481 f376eb1b0eb3e6d1c860214e4a4a2a49 529 Gene3D G3DSA:3.40.720.10 250 461 2.5E-98 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7481 f376eb1b0eb3e6d1c860214e4a4a2a49 529 Gene3D G3DSA:3.40.720.10 43 209 2.5E-98 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7481 f376eb1b0eb3e6d1c860214e4a4a2a49 529 Gene3D G3DSA:3.30.1120.10 462 522 1.9E-15 T 11-11-2016 RB2303 6e93d48c46508bac3f034108ff24cb81 236 SUPERFAMILY SSF88946 5 110 6.44E-28 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2303 6e93d48c46508bac3f034108ff24cb81 236 Pfam PF04542 Sigma-70 region 2 27 94 3.2E-18 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2303 6e93d48c46508bac3f034108ff24cb81 236 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 49 80 - T 11-11-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2303 6e93d48c46508bac3f034108ff24cb81 236 Gene3D G3DSA:1.10.1740.10 7 114 2.6E-31 T 11-11-2016 RB2303 6e93d48c46508bac3f034108ff24cb81 236 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 195 7.7E-32 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2303 6e93d48c46508bac3f034108ff24cb81 236 Gene3D G3DSA:1.10.10.10 132 198 2.9E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB2303 6e93d48c46508bac3f034108ff24cb81 236 Pfam PF08281 Sigma-70, region 4 141 190 1.6E-16 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB2303 6e93d48c46508bac3f034108ff24cb81 236 SUPERFAMILY SSF88659 132 195 3.74E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10219 8966f95300aad00f2529f84ca367bb36 128 SUPERFAMILY SSF51344 2 82 4.97E-17 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10219 8966f95300aad00f2529f84ca367bb36 128 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 126 15.82 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10219 8966f95300aad00f2529f84ca367bb36 128 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 81 1.1E-18 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10219 8966f95300aad00f2529f84ca367bb36 128 Gene3D G3DSA:2.60.15.10 2 87 1.7E-19 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB10219 8966f95300aad00f2529f84ca367bb36 128 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 8 83 3.0E-8 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 RB2518 bcb27eb86f24e927f2e19af34aee9570 350 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 17 342 54.476 T 11-11-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 RB2518 bcb27eb86f24e927f2e19af34aee9570 350 Gene3D G3DSA:3.40.50.720 17 213 4.8E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2518 bcb27eb86f24e927f2e19af34aee9570 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 20 332 4.4E-141 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2518 bcb27eb86f24e927f2e19af34aee9570 350 Gene3D G3DSA:3.90.25.10 214 345 4.8E-51 T 11-11-2016 RB2518 bcb27eb86f24e927f2e19af34aee9570 350 SUPERFAMILY SSF51735 17 338 3.15E-79 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2518 bcb27eb86f24e927f2e19af34aee9570 350 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 17 339 2.0E-159 T 11-11-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 RB10053 a74933cf192780888ff207aec37ef598 496 SUPERFAMILY SSF53649 316 470 1.15E-20 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10053 a74933cf192780888ff207aec37ef598 496 Pfam PF07394 Protein of unknown function (DUF1501) 69 495 4.5E-154 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB10053 a74933cf192780888ff207aec37ef598 496 Gene3D G3DSA:3.40.720.10 359 474 1.9E-7 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4248 255aadd0b92005c9ea925e5486e3c65f 195 Pfam PF09335 SNARE associated Golgi protein 73 189 9.0E-16 T 11-11-2016 IPR032816 SNARE associated Golgi protein RB3689 8e9056aea043418e3b1e79560561870d 248 Pfam PF00857 Isochorismatase family 30 181 3.0E-17 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB3689 8e9056aea043418e3b1e79560561870d 248 Gene3D G3DSA:3.40.50.850 21 221 2.6E-35 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB3689 8e9056aea043418e3b1e79560561870d 248 SUPERFAMILY SSF52499 21 218 2.49E-44 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB609 e0004f38d40d214cfe4cb1f1be929cf6 737 Pfam PF05448 Acetyl xylan esterase (AXE1) 133 292 1.0E-11 T 11-11-2016 IPR008391 Acetyl xylan esterase RB609 e0004f38d40d214cfe4cb1f1be929cf6 737 Gene3D G3DSA:3.40.50.1820 89 398 2.8E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB609 e0004f38d40d214cfe4cb1f1be929cf6 737 SUPERFAMILY SSF53474 80 210 3.75E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB609 e0004f38d40d214cfe4cb1f1be929cf6 737 SUPERFAMILY SSF53474 239 399 3.75E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB609 e0004f38d40d214cfe4cb1f1be929cf6 737 SUPERFAMILY SSF53474 480 680 2.25E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB609 e0004f38d40d214cfe4cb1f1be929cf6 737 Gene3D G3DSA:3.40.50.1820 475 680 1.1E-22 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2264 b4be984c3eb695f8f2e99d4175e3f6dd 168 SUPERFAMILY SSF81330 26 162 4.58E-27 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RB2264 b4be984c3eb695f8f2e99d4175e3f6dd 168 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 17 166 4.3E-38 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RB2264 b4be984c3eb695f8f2e99d4175e3f6dd 168 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 18 166 7.3E-31 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RB4071 f75ad5e4f0c5013e4d2bf0d9534a2051 369 Pfam PF01944 Stage II sporulation protein M 121 296 1.0E-23 T 11-11-2016 IPR002798 Stage II sporulation protein M-like RB3627 c5be69c6c7e7b68b6f4be6280fe49a77 280 Gene3D G3DSA:3.90.260.10 165 224 5.1E-11 T 11-11-2016 IPR002931 Transglutaminase-like RB3627 c5be69c6c7e7b68b6f4be6280fe49a77 280 SUPERFAMILY SSF54001 54 250 2.06E-39 T 11-11-2016 RB3627 c5be69c6c7e7b68b6f4be6280fe49a77 280 SMART SM00460 161 221 1.8E-17 T 11-11-2016 IPR002931 Transglutaminase-like RB3627 c5be69c6c7e7b68b6f4be6280fe49a77 280 Pfam PF01841 Transglutaminase-like superfamily 131 219 2.3E-22 T 11-11-2016 IPR002931 Transglutaminase-like RB4770 a03393b82960b8bcd92718f7b641d8c5 570 Gene3D G3DSA:3.90.1200.10 224 338 1.7E-4 T 11-11-2016 RB4770 a03393b82960b8bcd92718f7b641d8c5 570 SUPERFAMILY SSF56112 117 173 1.48E-18 T 11-11-2016 IPR011009 Protein kinase-like domain RB4770 a03393b82960b8bcd92718f7b641d8c5 570 SUPERFAMILY SSF56112 208 336 1.48E-18 T 11-11-2016 IPR011009 Protein kinase-like domain RB4770 a03393b82960b8bcd92718f7b641d8c5 570 Pfam PF03109 ABC1 family 128 244 9.1E-35 T 11-11-2016 IPR004147 UbiB domain RB4954 767a7722751aa374816592ecf563324d 166 Gene3D G3DSA:3.40.30.10 49 158 1.7E-14 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4954 767a7722751aa374816592ecf563324d 166 Pfam PF13899 Thioredoxin-like 54 130 4.1E-7 T 11-11-2016 RB4954 767a7722751aa374816592ecf563324d 166 SUPERFAMILY SSF52833 57 161 1.64E-13 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5862 8518416b40e0218b2cbb864f500461de 243 TIGRFAM TIGR03351 PhnX-like: phosphonatase-like hydrolase 15 235 2.4E-97 T 11-11-2016 IPR022468 Phosphonatase-like hydrolase RB5862 8518416b40e0218b2cbb864f500461de 243 Pfam PF13419 Haloacid dehalogenase-like hydrolase 18 201 1.1E-16 T 11-11-2016 IPR023214 HAD-like domain RB5862 8518416b40e0218b2cbb864f500461de 243 Gene3D G3DSA:3.40.50.1000 104 237 1.8E-31 T 11-11-2016 IPR023214 HAD-like domain RB5862 8518416b40e0218b2cbb864f500461de 243 Gene3D G3DSA:3.40.50.1000 13 34 1.8E-31 T 11-11-2016 IPR023214 HAD-like domain RB5862 8518416b40e0218b2cbb864f500461de 243 SUPERFAMILY SSF56784 14 236 1.15E-39 T 11-11-2016 IPR023214 HAD-like domain RB12102 94bcf4b562cd3b8db003972eae275120 477 Gene3D G3DSA:3.40.720.10 332 449 1.8E-7 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12102 94bcf4b562cd3b8db003972eae275120 477 Pfam PF07394 Protein of unknown function (DUF1501) 59 474 7.0E-149 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB12102 94bcf4b562cd3b8db003972eae275120 477 SUPERFAMILY SSF53649 283 459 8.5E-19 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8482 f81b7124d5ab128567ee30098e09ff6d 318 Hamap MF_00663 Phosphatidylserine decarboxylase proenzyme [psd]. 20 313 38.902 T 11-11-2016 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 RB8482 f81b7124d5ab128567ee30098e09ff6d 318 Pfam PF02666 Phosphatidylserine decarboxylase 105 311 3.5E-50 T 11-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 RB10279 8b5b0c7bbc4970025fe531b52542473c 151 Pfam PF00011 Hsp20/alpha crystallin family 51 148 2.0E-23 T 11-11-2016 IPR002068 Alpha crystallin/Hsp20 domain RB10279 8b5b0c7bbc4970025fe531b52542473c 151 SUPERFAMILY SSF49764 29 148 1.78E-36 T 11-11-2016 IPR008978 HSP20-like chaperone RB10279 8b5b0c7bbc4970025fe531b52542473c 151 Gene3D G3DSA:2.60.40.790 11 149 1.4E-39 T 11-11-2016 IPR008978 HSP20-like chaperone RB5731 966421105e731214f50b9b85d5ed37f2 543 Gene3D G3DSA:3.30.200.20 9 78 2.8E-22 T 11-11-2016 RB5731 966421105e731214f50b9b85d5ed37f2 543 SMART SM00220 12 275 3.8E-55 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB5731 966421105e731214f50b9b85d5ed37f2 543 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB5731 966421105e731214f50b9b85d5ed37f2 543 Gene3D G3DSA:1.10.510.10 79 273 2.3E-46 T 11-11-2016 RB5731 966421105e731214f50b9b85d5ed37f2 543 Pfam PF00069 Protein kinase domain 12 271 2.3E-50 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB5731 966421105e731214f50b9b85d5ed37f2 543 SUPERFAMILY SSF56112 9 273 1.25E-70 T 11-11-2016 IPR011009 Protein kinase-like domain RB787 c8fcde5a90848d8c23a6472954caa110 403 SUPERFAMILY SSF53098 21 375 2.35E-50 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB787 c8fcde5a90848d8c23a6472954caa110 403 Gene3D G3DSA:3.90.350.10 31 310 6.0E-49 T 11-11-2016 IPR014736 Transposase, Tn5-like, core RB787 c8fcde5a90848d8c23a6472954caa110 403 Pfam PF01609 Transposase DDE domain 121 326 1.7E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB7019 15a6eac9a37167470ae4991db67cd4f3 129 SUPERFAMILY SSF69118 18 126 3.14E-22 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB7019 15a6eac9a37167470ae4991db67cd4f3 129 Gene3D G3DSA:1.20.1290.10 27 127 4.0E-19 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB7019 15a6eac9a37167470ae4991db67cd4f3 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 39 121 8.4E-15 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RB2442 1eda60a623233d703d4b8c5b6a60eb52 1050 SUPERFAMILY SSF117074 59 108 7.32E-6 T 11-11-2016 RB2442 1eda60a623233d703d4b8c5b6a60eb52 1050 Pfam PF00404 Dockerin type I repeat 907 927 2.1E-8 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB2442 1eda60a623233d703d4b8c5b6a60eb52 1050 Pfam PF00404 Dockerin type I repeat 870 890 8.0E-7 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB2442 1eda60a623233d703d4b8c5b6a60eb52 1050 Pfam PF07595 Planctomycete extracellular 13 36 1.2E-5 T 11-11-2016 IPR011506 Planctomycete extracellular RB2442 1eda60a623233d703d4b8c5b6a60eb52 1050 SUPERFAMILY SSF63446 869 929 1.77E-10 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB2442 1eda60a623233d703d4b8c5b6a60eb52 1050 SUPERFAMILY SSF49313 585 670 7.54E-6 T 11-11-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RB2442 1eda60a623233d703d4b8c5b6a60eb52 1050 Gene3D G3DSA:1.10.1330.10 870 929 2.6E-7 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB2717 dd7b9e6f6ef47a715686e6ed7f2c95a2 185 SMART SM00195 42 179 4.6E-5 T 11-11-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 RB2717 dd7b9e6f6ef47a715686e6ed7f2c95a2 185 SUPERFAMILY SSF52799 33 181 1.2E-35 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like RB2717 dd7b9e6f6ef47a715686e6ed7f2c95a2 185 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 124 134 - T 11-11-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 RB2717 dd7b9e6f6ef47a715686e6ed7f2c95a2 185 Pfam PF00782 Dual specificity phosphatase, catalytic domain 49 166 1.1E-17 T 11-11-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 RB2717 dd7b9e6f6ef47a715686e6ed7f2c95a2 185 Gene3D G3DSA:3.90.190.10 38 176 1.0E-32 T 11-11-2016 IPR029021 Protein-tyrosine phosphatase-like RB5952 1e996ecbdae1b4368640662dc0482bad 493 Pfam PF12044 Putative peptidase family 40 424 7.0E-104 T 11-11-2016 IPR021917 Uncharacterised protein family, zinc metallopeptidase-like RB5952 1e996ecbdae1b4368640662dc0482bad 493 Gene3D G3DSA:3.40.390.10 297 340 2.6E-4 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB5952 1e996ecbdae1b4368640662dc0482bad 493 SUPERFAMILY SSF55486 278 346 1.67E-6 T 11-11-2016 RB12360 13d88425d5ca6f61b26bb58c06a98b96 521 SUPERFAMILY SSF75005 78 380 1.88E-61 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB12360 13d88425d5ca6f61b26bb58c06a98b96 521 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 87 372 7.7E-51 T 11-11-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal RB12360 13d88425d5ca6f61b26bb58c06a98b96 521 Gene3D G3DSA:2.115.10.20 91 241 3.1E-11 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB12360 13d88425d5ca6f61b26bb58c06a98b96 521 SMART SM00640 87 481 7.1E-47 T 11-11-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 RB12360 13d88425d5ca6f61b26bb58c06a98b96 521 Gene3D G3DSA:2.60.120.560 374 521 1.2E-11 T 11-11-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal RB12360 13d88425d5ca6f61b26bb58c06a98b96 521 SUPERFAMILY SSF49899 379 521 1.9E-16 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB8649 47c706313c3b325f5a8ca843969420bb 207 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 89 106 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RB8649 47c706313c3b325f5a8ca843969420bb 207 PIRSF PIRSF001467 23 207 5.7E-76 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RB8649 47c706313c3b325f5a8ca843969420bb 207 SUPERFAMILY SSF50891 36 205 3.21E-71 T 11-11-2016 IPR029000 Cyclophilin-like domain RB8649 47c706313c3b325f5a8ca843969420bb 207 Gene3D G3DSA:2.40.100.10 35 204 8.8E-75 T 11-11-2016 IPR029000 Cyclophilin-like domain RB8649 47c706313c3b325f5a8ca843969420bb 207 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 137 152 7.6E-40 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB8649 47c706313c3b325f5a8ca843969420bb 207 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 165 180 7.6E-40 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB8649 47c706313c3b325f5a8ca843969420bb 207 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 106 7.6E-40 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB8649 47c706313c3b325f5a8ca843969420bb 207 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 164 7.6E-40 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB8649 47c706313c3b325f5a8ca843969420bb 207 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 58 73 7.6E-40 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB8649 47c706313c3b325f5a8ca843969420bb 207 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 42 203 5.3E-46 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RB13235 345b6caeadda56172de9a195934193b7 140 Pfam PF07811 TadE-like protein 18 60 4.7E-12 T 11-11-2016 IPR012495 TadE-like RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 Gene3D G3DSA:2.60.40.10 35 192 1.7E-31 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 SUPERFAMILY SSF51445 175 503 4.82E-118 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 SUPERFAMILY SSF51445 532 607 4.82E-118 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 Pfam PF00128 Alpha amylase, catalytic domain 212 300 6.3E-13 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 40 138 1.2E-12 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 Gene3D G3DSA:3.20.20.80 193 608 5.6E-109 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 Gene3D G3DSA:2.60.40.1180 615 710 4.8E-13 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 SUPERFAMILY SSF51011 615 710 4.39E-9 T 11-11-2016 RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 SUPERFAMILY SSF81296 36 180 3.64E-28 T 11-11-2016 IPR014756 Immunoglobulin E-set RB4894 e51a342aeeb0d5a10a2caf48c0c244da 712 SMART SM00642 192 600 8.6E-10 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RB1107 7dac49c1ee83b7c7599fa7a48d2eac57 100 Pfam PF07636 PSRT 1 32 7.0E-20 T 11-11-2016 IPR011504 PSRT RB2883 6a6a3b8e3c2b8055953e6b55ce0c0ad2 120 Pfam PF07640 QPP 1 35 7.5E-18 T 11-11-2016 IPR011507 QPP RB10817 5afa3f68d0c65493bb2605034eccb440 157 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 145 2.5E-47 T 11-11-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 RB10817 5afa3f68d0c65493bb2605034eccb440 157 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 146 5.8E-48 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB10817 5afa3f68d0c65493bb2605034eccb440 157 PIRSF PIRSF005384 3 149 3.0E-55 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB10817 5afa3f68d0c65493bb2605034eccb440 157 SUPERFAMILY SSF89623 2 146 1.83E-51 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB10817 5afa3f68d0c65493bb2605034eccb440 157 Gene3D G3DSA:3.40.1400.10 2 147 1.3E-54 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB10817 5afa3f68d0c65493bb2605034eccb440 157 Pfam PF02502 Ribose/Galactose Isomerase 5 142 1.5E-48 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RB7171 521a8ae495ff5bf028f41b6aa528e748 429 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 270 384 2.7E-36 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RB7171 521a8ae495ff5bf028f41b6aa528e748 429 Gene3D G3DSA:3.40.47.10 279 427 2.2E-61 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB7171 521a8ae495ff5bf028f41b6aa528e748 429 PIRSF PIRSF000447 2 429 3.8E-138 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 RB7171 521a8ae495ff5bf028f41b6aa528e748 429 SUPERFAMILY SSF53901 5 267 4.94E-61 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB7171 521a8ae495ff5bf028f41b6aa528e748 429 SUPERFAMILY SSF53901 229 427 5.55E-74 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB7171 521a8ae495ff5bf028f41b6aa528e748 429 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 262 3.6E-44 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RB7171 521a8ae495ff5bf028f41b6aa528e748 429 SMART SM00825 Beta-ketoacyl synthase 7 429 5.8E-15 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RB7171 521a8ae495ff5bf028f41b6aa528e748 429 Gene3D G3DSA:3.40.47.10 4 273 1.4E-59 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RB719 582279bfc1545ecd6a16178c887fec98 91 Pfam PF07636 PSRT 22 53 7.4E-20 T 11-11-2016 IPR011504 PSRT RB7698 007880c00e10ab9f162f57ff6ffe6ec0 415 SUPERFAMILY SSF48452 287 394 2.71E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7698 007880c00e10ab9f162f57ff6ffe6ec0 415 Gene3D G3DSA:1.25.40.10 197 394 5.6E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12778 be2c343dbd42211d1122ddf3d0ee2120 119 Gene3D G3DSA:1.20.1440.60 3 113 2.2E-35 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein RB12778 be2c343dbd42211d1122ddf3d0ee2120 119 SUPERFAMILY SSF158446 5 114 4.84E-35 T 11-11-2016 RB12778 be2c343dbd42211d1122ddf3d0ee2120 119 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 10 111 2.1E-34 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein RB12778 be2c343dbd42211d1122ddf3d0ee2120 119 Pfam PF05635 23S rRNA-intervening sequence protein 6 106 1.1E-34 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein RB10196 89bc8a6e380dea0e83a3392f57972525 436 Pfam PF16258 Domain of unknown function (DUF4912) 177 293 3.3E-28 T 11-11-2016 IPR032585 Protein of unknown function DUF4912 RB10196 89bc8a6e380dea0e83a3392f57972525 436 SMART SM00959 6 48 2.1E-6 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RB10196 89bc8a6e380dea0e83a3392f57972525 436 SUPERFAMILY SSF68912 4 44 2.24E-7 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RB10196 89bc8a6e380dea0e83a3392f57972525 436 Gene3D G3DSA:1.10.720.10 6 43 9.8E-7 T 11-11-2016 RB10196 89bc8a6e380dea0e83a3392f57972525 436 Pfam PF07498 Rho termination factor, N-terminal domain 7 43 1.7E-9 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RB12942 f2cbd8a05431cfd9ea6ad9fd36002116 500 SUPERFAMILY SSF50998 59 446 2.88E-33 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB12942 f2cbd8a05431cfd9ea6ad9fd36002116 500 Pfam PF13360 PQQ-like domain 173 413 2.2E-12 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB12942 f2cbd8a05431cfd9ea6ad9fd36002116 500 Gene3D G3DSA:2.140.10.10 41 494 1.2E-31 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB4631 ff5026d5d257e44f2ba78bf7803d338c 444 Gene3D G3DSA:3.40.640.10 54 333 6.2E-31 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB4631 ff5026d5d257e44f2ba78bf7803d338c 444 SUPERFAMILY SSF53383 112 442 1.71E-38 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB4631 ff5026d5d257e44f2ba78bf7803d338c 444 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 119 440 1.8E-28 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RB10473 9e3606aa0284ad088f25d99aeecf8c0a 811 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 544 708 9.8E-8 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB10473 9e3606aa0284ad088f25d99aeecf8c0a 811 Gene3D G3DSA:2.40.50.100 657 674 1.8E-6 T 11-11-2016 RB10473 9e3606aa0284ad088f25d99aeecf8c0a 811 Gene3D G3DSA:2.40.50.100 557 588 1.8E-6 T 11-11-2016 RB10473 9e3606aa0284ad088f25d99aeecf8c0a 811 Gene3D G3DSA:3.30.450.40 318 464 1.5E-5 T 11-11-2016 IPR029016 GAF domain-like RB10473 9e3606aa0284ad088f25d99aeecf8c0a 811 Gene3D G3DSA:3.30.450.40 133 298 1.2E-6 T 11-11-2016 IPR029016 GAF domain-like RB10473 9e3606aa0284ad088f25d99aeecf8c0a 811 SUPERFAMILY SSF55781 140 299 2.84E-6 T 11-11-2016 IPR029016 GAF domain-like RB10473 9e3606aa0284ad088f25d99aeecf8c0a 811 SUPERFAMILY SSF111369 544 754 8.37E-10 T 11-11-2016 RB9276 fea2c7dbe5412d49783bc5be1867ad55 233 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 104 175 5.9E-18 T 11-11-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 RB9276 fea2c7dbe5412d49783bc5be1867ad55 233 Pfam PF04347 Flagellar biosynthesis protein, FliO 116 203 1.3E-10 T 11-11-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 RB3014 c5aefbf6de1be8b6b8fcd52daf1636c6 524 SUPERFAMILY SSF101898 302 410 4.97E-9 T 11-11-2016 RB3014 c5aefbf6de1be8b6b8fcd52daf1636c6 524 SUPERFAMILY SSF101898 46 66 4.97E-9 T 11-11-2016 RB3014 c5aefbf6de1be8b6b8fcd52daf1636c6 524 SUPERFAMILY SSF101898 163 255 4.97E-9 T 11-11-2016 RB3014 c5aefbf6de1be8b6b8fcd52daf1636c6 524 SUPERFAMILY SSF101898 96 136 4.97E-9 T 11-11-2016 RB3014 c5aefbf6de1be8b6b8fcd52daf1636c6 524 Gene3D G3DSA:2.120.10.30 47 207 6.4E-11 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB3014 c5aefbf6de1be8b6b8fcd52daf1636c6 524 Gene3D G3DSA:2.120.10.30 298 478 6.4E-11 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB8046 94592c279ea171028631742e733c36c2 400 PIRSF PIRSF031773 1 400 8.3E-149 T 11-11-2016 IPR005891 DevC protein RB8046 94592c279ea171028631742e733c36c2 400 Pfam PF02687 FtsX-like permease family 287 396 6.9E-10 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB7773 343a43f12e231564cbcc078eee9b746b 822 Pfam PF12831 FAD dependent oxidoreductase 252 426 5.1E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7773 343a43f12e231564cbcc078eee9b746b 822 Pfam PF12831 FAD dependent oxidoreductase 469 646 4.4E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7773 343a43f12e231564cbcc078eee9b746b 822 SUPERFAMILY SSF51905 578 626 2.87E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7773 343a43f12e231564cbcc078eee9b746b 822 SUPERFAMILY SSF51905 244 415 2.87E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7773 343a43f12e231564cbcc078eee9b746b 822 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 252 274 2.2E-6 T 11-11-2016 RB7773 343a43f12e231564cbcc078eee9b746b 822 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 686 707 2.2E-6 T 11-11-2016 RB7773 343a43f12e231564cbcc078eee9b746b 822 Gene3D G3DSA:3.50.50.60 250 475 9.9E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7773 343a43f12e231564cbcc078eee9b746b 822 Gene3D G3DSA:3.50.50.60 576 648 9.9E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7773 343a43f12e231564cbcc078eee9b746b 822 Gene3D G3DSA:2.60.120.260 90 205 3.2E-7 T 11-11-2016 IPR008979 Galactose-binding domain-like RB246 635879c6731cfd325abbd19eaec9b275 170 SUPERFAMILY SSF49464 45 102 4.32E-6 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain RB246 635879c6731cfd325abbd19eaec9b275 170 Gene3D G3DSA:2.60.40.1120 45 85 3.3E-4 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 248 8.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 8.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 8.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 Gene3D G3DSA:3.40.50.720 2 266 5.4E-79 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 264 2.6E-55 T 11-11-2016 RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 203 5.4E-5 T 11-11-2016 RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.7E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.7E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.7E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB9574 eb362c95b0f7aba0bff0995bc635e28c 268 SUPERFAMILY SSF51735 7 266 9.38E-74 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4715 daf6a3428046fa0cae1d8bbba2c883e6 1291 SUPERFAMILY SSF53300 1110 1270 1.04E-21 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4715 daf6a3428046fa0cae1d8bbba2c883e6 1291 Pfam PF05762 VWA domain containing CoxE-like protein 1051 1270 1.1E-46 T 11-11-2016 IPR008912 Uncharacterised protein family CoxE-like RB11110 1f6e20f3f35bac297d5024f9492df22f 309 Pfam PF07592 Rhodopirellula transposase DDE domain 3 308 2.1E-108 T 11-11-2016 IPR011518 Transposase, Rhodopirellula-type RB10051 f4d194d5b11e740bd1eeb9a38d31dc7a 1210 Pfam PF07583 Protein of unknown function (DUF1549) 302 511 1.3E-85 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB10051 f4d194d5b11e740bd1eeb9a38d31dc7a 1210 Pfam PF07587 Protein of unknown function (DUF1553) 887 1155 8.7E-97 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB10051 f4d194d5b11e740bd1eeb9a38d31dc7a 1210 Pfam PF07635 Planctomycete cytochrome C 187 247 1.4E-20 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB12628 6c4bd6b3a98bd1e65c7f7027550019e9 210 Gene3D G3DSA:3.90.1030.10 113 170 2.2E-38 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12628 6c4bd6b3a98bd1e65c7f7027550019e9 210 Gene3D G3DSA:3.90.1030.10 1 73 2.2E-38 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12628 6c4bd6b3a98bd1e65c7f7027550019e9 210 Pfam PF01196 Ribosomal protein L17 20 170 1.3E-25 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12628 6c4bd6b3a98bd1e65c7f7027550019e9 210 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 170 25.207 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12628 6c4bd6b3a98bd1e65c7f7027550019e9 210 SUPERFAMILY SSF64263 1 73 1.44E-29 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB12628 6c4bd6b3a98bd1e65c7f7027550019e9 210 SUPERFAMILY SSF64263 113 172 1.44E-29 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RB4781 24fc7aa54bd39e23185ad03cfde263c6 156 Gene3D G3DSA:2.60.300.12 52 145 2.0E-19 T 11-11-2016 IPR000361 FeS cluster biogenesis RB4781 24fc7aa54bd39e23185ad03cfde263c6 156 Pfam PF01521 Iron-sulphur cluster biosynthesis 52 145 1.4E-11 T 11-11-2016 IPR000361 FeS cluster biogenesis RB4781 24fc7aa54bd39e23185ad03cfde263c6 156 SUPERFAMILY SSF89360 51 145 1.0E-19 T 11-11-2016 IPR000361 FeS cluster biogenesis RB11331 fd114c03ee10a658152f21394e581729 809 SUPERFAMILY SSF51735 192 284 1.27E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11331 fd114c03ee10a658152f21394e581729 809 Pfam PF02254 TrkA-N domain 195 283 4.7E-17 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RB11331 fd114c03ee10a658152f21394e581729 809 Gene3D G3DSA:3.40.50.720 192 284 1.7E-21 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4282 9db687350694dfc5fc3f1f33de8def1c 291 SMART SM00235 86 252 7.8E-6 T 11-11-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 RB4282 9db687350694dfc5fc3f1f33de8def1c 291 Gene3D G3DSA:3.40.390.10 89 251 1.0E-17 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB4282 9db687350694dfc5fc3f1f33de8def1c 291 SUPERFAMILY SSF55486 48 250 1.75E-31 T 11-11-2016 RB4282 9db687350694dfc5fc3f1f33de8def1c 291 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 139 206 7.3E-6 T 11-11-2016 RB9840 8a7e05bfd8b2dc0fda6f863347c2a085 869 SMART SM00849 617 821 0.0046 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB9840 8a7e05bfd8b2dc0fda6f863347c2a085 869 Pfam PF00753 Metallo-beta-lactamase superfamily 615 817 1.6E-10 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB9840 8a7e05bfd8b2dc0fda6f863347c2a085 869 Pfam PF13567 Domain of unknown function (DUF4131) 10 228 4.0E-18 T 11-11-2016 IPR025405 Domain of unknown function DUF4131 RB9840 8a7e05bfd8b2dc0fda6f863347c2a085 869 Gene3D G3DSA:3.60.15.10 607 843 1.1E-18 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB9840 8a7e05bfd8b2dc0fda6f863347c2a085 869 SUPERFAMILY SSF56281 605 852 1.44E-28 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB9840 8a7e05bfd8b2dc0fda6f863347c2a085 869 Pfam PF03772 Competence protein 278 567 1.7E-49 T 11-11-2016 IPR004477 ComEC/Rec2-related protein RB9840 8a7e05bfd8b2dc0fda6f863347c2a085 869 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 299 498 2.0E-19 T 11-11-2016 IPR004477 ComEC/Rec2-related protein RB5343 46e695ec0e2a351fec290b9e86a994b0 924 Pfam PF00580 UvrD/REP helicase N-terminal domain 59 478 2.8E-44 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RB5343 46e695ec0e2a351fec290b9e86a994b0 924 SUPERFAMILY SSF52540 585 797 1.44E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 SUPERFAMILY SSF52540 150 249 1.44E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 SUPERFAMILY SSF52540 833 859 1.44E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 SUPERFAMILY SSF52540 352 514 1.44E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 SUPERFAMILY SSF52540 58 113 1.44E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 Gene3D G3DSA:3.40.50.300 158 220 4.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 Gene3D G3DSA:3.40.50.300 59 109 4.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 Gene3D G3DSA:3.40.50.300 362 480 4.4E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 Gene3D G3DSA:3.40.50.300 489 631 3.3E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 Gene3D G3DSA:3.40.50.300 750 915 3.3E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5343 46e695ec0e2a351fec290b9e86a994b0 924 Pfam PF13361 UvrD-like helicase C-terminal domain 723 853 7.0E-14 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RB3057 c59f91bbc4c740067669a0acbb47c635 72 Pfam PF07636 PSRT 9 27 1.4E-5 T 11-11-2016 IPR011504 PSRT RB3367 6e26e19d2b3f727b02524453d2970e58 421 SUPERFAMILY SSF56935 25 416 3.6E-55 T 11-11-2016 RB3367 6e26e19d2b3f727b02524453d2970e58 421 Gene3D G3DSA:2.40.160.60 25 417 8.2E-64 T 11-11-2016 RB3367 6e26e19d2b3f727b02524453d2970e58 421 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 27 387 1.6E-31 T 11-11-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) RB12213 e15efe16ba2af7cd528d3c19944715cd 322 SUPERFAMILY SSF56747 74 210 1.31E-15 T 11-11-2016 RB12213 e15efe16ba2af7cd528d3c19944715cd 322 Gene3D G3DSA:3.90.920.10 89 199 3.9E-6 T 11-11-2016 RB11964 bdd04ea71295eb44ac8da61bdeab3203 106 SUPERFAMILY SSF117916 1 104 9.81E-26 T 11-11-2016 RB11964 bdd04ea71295eb44ac8da61bdeab3203 106 Pfam PF01883 Domain of unknown function DUF59 5 84 1.1E-14 T 11-11-2016 IPR002744 Domain of unknown function DUF59 RB5011 db0021890699499604a82a5b4acc4f1f 426 SUPERFAMILY SSF49899 170 420 8.05E-21 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5011 db0021890699499604a82a5b4acc4f1f 426 Gene3D G3DSA:2.60.120.200 219 421 2.8E-14 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB5705 8d260e35306719c6daa4dcea810ccf7d 170 Pfam PF02391 MoaE protein 37 141 4.8E-28 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB5705 8d260e35306719c6daa4dcea810ccf7d 170 Gene3D G3DSA:3.90.1170.40 35 159 7.9E-39 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB5705 8d260e35306719c6daa4dcea810ccf7d 170 SUPERFAMILY SSF54690 38 162 3.4E-35 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RB11420 67b6e849de6e111798ce18e176f507f0 282 Gene3D G3DSA:3.60.21.10 104 255 1.1E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB11420 67b6e849de6e111798ce18e176f507f0 282 Pfam PF00149 Calcineurin-like phosphoesterase 56 257 1.3E-4 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB11420 67b6e849de6e111798ce18e176f507f0 282 SUPERFAMILY SSF56300 53 259 8.23E-12 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB5963 8638c49cc575cae4e937748a4a1e80ff 264 SUPERFAMILY SSF102405 107 210 2.75E-6 T 11-11-2016 RB5963 8638c49cc575cae4e937748a4a1e80ff 264 Pfam PF12694 Putative molybdenum carrier 109 252 2.4E-57 T 11-11-2016 IPR024755 Molybdenum cofactor carrier, putative RB614 494888f0e379848054b01813ce622d92 399 Pfam PF13360 PQQ-like domain 159 356 3.8E-13 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB614 494888f0e379848054b01813ce622d92 399 SMART SM00564 295 327 1.3 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB614 494888f0e379848054b01813ce622d92 399 SMART SM00564 93 125 65.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB614 494888f0e379848054b01813ce622d92 399 SMART SM00564 138 173 15.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB614 494888f0e379848054b01813ce622d92 399 SMART SM00564 196 234 410.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB614 494888f0e379848054b01813ce622d92 399 SUPERFAMILY SSF50998 6 386 1.11E-54 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB614 494888f0e379848054b01813ce622d92 399 Gene3D G3DSA:2.140.10.10 8 396 1.6E-50 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB878 d8b663b7b73133a4de299be26a6bec38 480 Pfam PF13435 Cytochrome c554 and c-prime 254 290 9.5E-6 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB878 d8b663b7b73133a4de299be26a6bec38 480 SUPERFAMILY SSF48695 122 152 7.4E-30 T 11-11-2016 IPR011031 Multihaem cytochrome RB878 d8b663b7b73133a4de299be26a6bec38 480 SUPERFAMILY SSF48695 367 469 7.4E-30 T 11-11-2016 IPR011031 Multihaem cytochrome RB878 d8b663b7b73133a4de299be26a6bec38 480 SUPERFAMILY SSF48695 196 332 7.4E-30 T 11-11-2016 IPR011031 Multihaem cytochrome RB878 d8b663b7b73133a4de299be26a6bec38 480 Gene3D G3DSA:1.10.710.10 123 165 1.7E-25 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB878 d8b663b7b73133a4de299be26a6bec38 480 Gene3D G3DSA:1.10.710.10 371 438 1.7E-25 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB878 d8b663b7b73133a4de299be26a6bec38 480 Gene3D G3DSA:1.10.710.10 245 334 1.7E-25 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB9278 05a91072325c57c3c22480bfaca536d0 837 Gene3D G3DSA:3.40.50.620 29 101 5.5E-8 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB9278 05a91072325c57c3c22480bfaca536d0 837 SUPERFAMILY SSF48173 235 472 9.94E-43 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB9278 05a91072325c57c3c22480bfaca536d0 837 Gene3D G3DSA:3.90.660.10 512 581 3.0E-55 T 11-11-2016 RB9278 05a91072325c57c3c22480bfaca536d0 837 Gene3D G3DSA:3.90.660.10 669 771 3.0E-55 T 11-11-2016 RB9278 05a91072325c57c3c22480bfaca536d0 837 PRINTS PR00419 Adrenodoxin reductase family signature 496 509 2.1E-5 T 11-11-2016 RB9278 05a91072325c57c3c22480bfaca536d0 837 PRINTS PR00419 Adrenodoxin reductase family signature 473 495 2.1E-5 T 11-11-2016 RB9278 05a91072325c57c3c22480bfaca536d0 837 SUPERFAMILY SSF51905 775 811 4.1E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9278 05a91072325c57c3c22480bfaca536d0 837 SUPERFAMILY SSF51905 472 678 4.1E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9278 05a91072325c57c3c22480bfaca536d0 837 Pfam PF00875 DNA photolyase 30 162 4.1E-8 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB9278 05a91072325c57c3c22480bfaca536d0 837 Pfam PF13450 NAD(P)-binding Rossmann-like domain 476 532 2.6E-16 T 11-11-2016 RB9278 05a91072325c57c3c22480bfaca536d0 837 Gene3D G3DSA:1.10.579.10 308 458 2.2E-9 T 11-11-2016 RB9278 05a91072325c57c3c22480bfaca536d0 837 SUPERFAMILY SSF52425 29 193 1.44E-21 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB9278 05a91072325c57c3c22480bfaca536d0 837 Gene3D G3DSA:1.25.40.80 221 307 1.2E-18 T 11-11-2016 RB9278 05a91072325c57c3c22480bfaca536d0 837 Gene3D G3DSA:3.50.50.60 472 510 2.7E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9278 05a91072325c57c3c22480bfaca536d0 837 Gene3D G3DSA:3.50.50.60 772 815 2.7E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB9278 05a91072325c57c3c22480bfaca536d0 837 Gene3D G3DSA:3.50.50.60 582 668 2.7E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB13217 8229b662205f362388d09a2f4a89a036 127 Pfam PF03965 Penicillinase repressor 10 120 1.7E-34 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB13217 8229b662205f362388d09a2f4a89a036 127 Gene3D G3DSA:1.10.10.10 6 82 1.6E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB13217 8229b662205f362388d09a2f4a89a036 127 PIRSF PIRSF019455 3 127 4.6E-30 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RB13217 8229b662205f362388d09a2f4a89a036 127 SUPERFAMILY SSF46785 9 124 1.68E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB5439 23947880af1abfe621e46516bf907e94 250 Pfam PF01493 GXGXG motif 67 192 7.5E-8 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB5439 23947880af1abfe621e46516bf907e94 250 PIRSF PIRSF006519 10 243 2.5E-72 T 11-11-2016 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein RB5439 23947880af1abfe621e46516bf907e94 250 Gene3D G3DSA:2.160.20.60 56 213 1.3E-31 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB5439 23947880af1abfe621e46516bf907e94 250 SUPERFAMILY SSF69336 47 205 1.7E-34 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RB6373 7d08a6f5439631596393b446581a98c3 426 Gene3D G3DSA:3.40.50.300 220 379 7.1E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6373 7d08a6f5439631596393b446581a98c3 426 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 349 2.5E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RB6373 7d08a6f5439631596393b446581a98c3 426 SUPERFAMILY SSF103025 28 128 1.02E-6 T 11-11-2016 RB6373 7d08a6f5439631596393b446581a98c3 426 Gene3D G3DSA:3.30.1360.120 21 124 5.9E-8 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RB6373 7d08a6f5439631596393b446581a98c3 426 Pfam PF01926 50S ribosome-binding GTPase 221 340 2.7E-17 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 RB6373 7d08a6f5439631596393b446581a98c3 426 SUPERFAMILY SSF52540 165 349 7.49E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11994 8a0a9a189b3279775d7a2f5f88c14372 733 SUPERFAMILY SSF53474 258 311 2.21E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11994 8a0a9a189b3279775d7a2f5f88c14372 733 SUPERFAMILY SSF53474 86 218 2.21E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11994 8a0a9a189b3279775d7a2f5f88c14372 733 Pfam PF05448 Acetyl xylan esterase (AXE1) 261 305 2.1E-5 T 11-11-2016 IPR008391 Acetyl xylan esterase RB11994 8a0a9a189b3279775d7a2f5f88c14372 733 Gene3D G3DSA:3.40.50.1820 69 319 3.4E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8123 f66158ca1cc6947ee734b4ec0b829b00 177 Pfam PF07977 FabA-like domain 34 153 3.1E-20 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RB8123 f66158ca1cc6947ee734b4ec0b829b00 177 SUPERFAMILY SSF54637 28 165 1.39E-35 T 11-11-2016 IPR029069 HotDog domain RB8123 f66158ca1cc6947ee734b4ec0b829b00 177 Gene3D G3DSA:3.10.129.10 21 162 8.2E-38 T 11-11-2016 IPR029069 HotDog domain RB8008 77f58af25efdb42dd1189331e0cc750b 400 Pfam PF07596 Protein of unknown function (DUF1559) 33 357 5.7E-65 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8008 77f58af25efdb42dd1189331e0cc750b 400 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.8E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8008 77f58af25efdb42dd1189331e0cc750b 400 Gene3D G3DSA:3.30.700.10 9 77 7.6E-8 T 11-11-2016 RB8008 77f58af25efdb42dd1189331e0cc750b 400 SUPERFAMILY SSF54523 9 154 2.43E-28 T 11-11-2016 RB8008 77f58af25efdb42dd1189331e0cc750b 400 Pfam PF13633 Prokaryotic N-terminal methylation site 7 32 1.1E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB89 1434de069f96eec1577933fe1f0b6e53 235 Gene3D G3DSA:3.40.50.1820 54 225 2.3E-16 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB89 1434de069f96eec1577933fe1f0b6e53 235 SUPERFAMILY SSF53474 11 222 1.49E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB89 1434de069f96eec1577933fe1f0b6e53 235 Pfam PF12697 Alpha/beta hydrolase family 43 217 2.2E-10 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB11253 fdacdaad17e921b8201b27c262f3a693 226 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 85 107 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RB11253 fdacdaad17e921b8201b27c262f3a693 226 Pfam PF01066 CDP-alcohol phosphatidyltransferase 44 107 4.8E-13 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RB5334 33c28aa4b939dc10b353ff493661020f 672 Pfam PF04055 Radical SAM superfamily 342 506 1.5E-14 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB5334 33c28aa4b939dc10b353ff493661020f 672 Gene3D G3DSA:3.80.30.20 337 543 8.6E-36 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB5334 33c28aa4b939dc10b353ff493661020f 672 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 73 662 2.1E-181 T 11-11-2016 IPR023862 Conserved hypothetical protein CHP03960, radical SAM RB5334 33c28aa4b939dc10b353ff493661020f 672 SUPERFAMILY SSF102114 306 631 5.1E-34 T 11-11-2016 RB5334 33c28aa4b939dc10b353ff493661020f 672 SMART SM00729 338 555 1.4E-16 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB12598 e05e69af9fe43fd1266d677c19174e3d 321 Pfam PF01148 Cytidylyltransferase family 49 319 7.7E-33 T 11-11-2016 RB10767 663a030aa1d6f3ad283e7fd9df9b5470 550 Pfam PF01420 Type I restriction modification DNA specificity domain 301 474 4.5E-4 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RB10767 663a030aa1d6f3ad283e7fd9df9b5470 550 Pfam PF01420 Type I restriction modification DNA specificity domain 42 202 3.2E-18 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RB10767 663a030aa1d6f3ad283e7fd9df9b5470 550 SUPERFAMILY SSF116734 41 243 6.38E-33 T 11-11-2016 RB10767 663a030aa1d6f3ad283e7fd9df9b5470 550 SUPERFAMILY SSF116734 286 515 5.56E-34 T 11-11-2016 RB8629 8d7ff3c7f994097bd82b6b576eda29e3 98 Gene3D G3DSA:3.90.1570.10 5 84 1.9E-18 T 11-11-2016 IPR012296 Nuclease, putative, TT1808 RB8629 8d7ff3c7f994097bd82b6b576eda29e3 98 Pfam PF05685 Putative restriction endonuclease 4 80 1.6E-17 T 11-11-2016 IPR008538 Domain of unknown function DUF820 RB8629 8d7ff3c7f994097bd82b6b576eda29e3 98 SUPERFAMILY SSF52980 5 84 1.72E-17 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RB4728 a23e9c6537e0bf0f18470d791f0e0c48 344 SUPERFAMILY SSF56112 229 333 1.04E-53 T 11-11-2016 IPR011009 Protein kinase-like domain RB4728 a23e9c6537e0bf0f18470d791f0e0c48 344 SUPERFAMILY SSF56112 12 177 1.04E-53 T 11-11-2016 IPR011009 Protein kinase-like domain RB4728 a23e9c6537e0bf0f18470d791f0e0c48 344 SMART SM00220 23 335 7.5E-28 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB4728 a23e9c6537e0bf0f18470d791f0e0c48 344 Pfam PF00069 Protein kinase domain 23 323 2.5E-32 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB4728 a23e9c6537e0bf0f18470d791f0e0c48 344 Gene3D G3DSA:1.10.510.10 141 185 5.1E-34 T 11-11-2016 RB4728 a23e9c6537e0bf0f18470d791f0e0c48 344 Gene3D G3DSA:1.10.510.10 228 327 5.1E-34 T 11-11-2016 RB4728 a23e9c6537e0bf0f18470d791f0e0c48 344 Gene3D G3DSA:3.30.200.20 9 140 3.3E-18 T 11-11-2016 RB4984 927010480d626d68aa97f04e71bdcde6 383 SUPERFAMILY SSF53187 55 336 1.75E-61 T 11-11-2016 RB4984 927010480d626d68aa97f04e71bdcde6 383 PIRSF PIRSF039012 19 344 9.5E-125 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 RB4984 927010480d626d68aa97f04e71bdcde6 383 Gene3D G3DSA:2.40.50.100 275 336 7.3E-4 T 11-11-2016 RB4984 927010480d626d68aa97f04e71bdcde6 383 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 69 337 1.3E-54 T 11-11-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 RB4984 927010480d626d68aa97f04e71bdcde6 383 Gene3D G3DSA:3.40.630.10 57 246 1.7E-24 T 11-11-2016 RB1202 29c5a58ab90397eaf4c14063e9d05590 122 Pfam PF13936 Helix-turn-helix domain 3 43 1.4E-12 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain RB1202 29c5a58ab90397eaf4c14063e9d05590 122 Gene3D G3DSA:1.10.10.10 2 42 2.7E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1202 29c5a58ab90397eaf4c14063e9d05590 122 SUPERFAMILY SSF46689 2 100 1.72E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB11961 fa2706055794fa23c00ce846fc7996fb 234 Gene3D G3DSA:1.10.150.320 106 171 1.9E-16 T 11-11-2016 RB11961 fa2706055794fa23c00ce846fc7996fb 234 SUPERFAMILY SSF47781 101 167 9.56E-21 T 11-11-2016 IPR010994 RuvA domain 2-like RB11961 fa2706055794fa23c00ce846fc7996fb 234 Pfam PF12836 Helix-hairpin-helix motif 109 167 3.5E-18 T 11-11-2016 RB12454 145b1b8d24dfb032dd053ab0d7582620 199 Gene3D G3DSA:3.80.10.10 51 195 4.9E-12 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB12454 145b1b8d24dfb032dd053ab0d7582620 199 SUPERFAMILY SSF52047 79 196 3.14E-13 T 11-11-2016 RB4887 ba243c0a94e7999a8ceb596606a6fc24 300 Gene3D G3DSA:3.40.50.360 1 185 3.5E-18 T 11-11-2016 IPR029039 Flavoprotein-like domain RB4887 ba243c0a94e7999a8ceb596606a6fc24 300 Pfam PF12724 Flavodoxin domain 4 153 2.3E-34 T 11-11-2016 IPR026816 Flavodoxin domain RB4887 ba243c0a94e7999a8ceb596606a6fc24 300 SUPERFAMILY SSF52218 1 180 8.25E-21 T 11-11-2016 IPR029039 Flavoprotein-like domain RB4887 ba243c0a94e7999a8ceb596606a6fc24 300 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RB3569 9515986c9ea244cea36cf75480d2b622 123 TIGRFAM TIGR04256 GxxExxY: GxxExxY protein 9 121 5.1E-43 T 11-11-2016 IPR026350 GxxExxY protein RB3569 9515986c9ea244cea36cf75480d2b622 123 Pfam PF13366 PD-(D/E)XK nuclease superfamily 9 120 1.2E-39 T 11-11-2016 IPR026350 GxxExxY protein RB5694 a3708bcc75220632c709d342efa75a05 261 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 11 192 8.9E-37 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RB5694 a3708bcc75220632c709d342efa75a05 261 Pfam PF13500 AAA domain 10 221 2.9E-28 T 11-11-2016 RB5694 a3708bcc75220632c709d342efa75a05 261 SUPERFAMILY SSF52540 6 220 4.13E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5694 a3708bcc75220632c709d342efa75a05 261 Gene3D G3DSA:3.40.50.300 9 226 1.4E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5694 a3708bcc75220632c709d342efa75a05 261 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 7 226 24.806 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RB5694 a3708bcc75220632c709d342efa75a05 261 PIRSF PIRSF006755 6 224 3.1E-42 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RB898 52f3e0c7e34e78e4b539b816f4face04 520 SUPERFAMILY SSF53649 341 505 2.24E-29 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB898 52f3e0c7e34e78e4b539b816f4face04 520 Gene3D G3DSA:3.40.720.10 379 505 3.0E-11 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB898 52f3e0c7e34e78e4b539b816f4face04 520 Pfam PF07394 Protein of unknown function (DUF1501) 271 519 3.4E-95 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB898 52f3e0c7e34e78e4b539b816f4face04 520 Pfam PF07394 Protein of unknown function (DUF1501) 50 232 3.4E-43 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB7439 d3298238627c2eba32f3bb2f6764584b 436 SUPERFAMILY SSF51306 119 267 3.98E-17 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RB7439 d3298238627c2eba32f3bb2f6764584b 436 SUPERFAMILY SSF51306 380 424 3.98E-17 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RB7439 d3298238627c2eba32f3bb2f6764584b 436 SUPERFAMILY SSF51306 45 58 3.98E-17 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RB7439 d3298238627c2eba32f3bb2f6764584b 436 Gene3D G3DSA:2.10.109.10 390 422 5.9E-12 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RB7439 d3298238627c2eba32f3bb2f6764584b 436 Gene3D G3DSA:2.10.109.10 44 164 5.9E-12 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RB5282 86edd066a105645013857b82c2e0f8aa 578 SUPERFAMILY SSF53649 513 553 1.03E-103 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5282 86edd066a105645013857b82c2e0f8aa 578 SUPERFAMILY SSF53649 51 468 1.03E-103 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5282 86edd066a105645013857b82c2e0f8aa 578 Gene3D G3DSA:3.40.720.10 50 455 1.4E-86 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5282 86edd066a105645013857b82c2e0f8aa 578 Pfam PF00884 Sulfatase 52 410 8.8E-52 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB5282 86edd066a105645013857b82c2e0f8aa 578 Gene3D G3DSA:3.30.1120.10 456 470 1.2E-13 T 11-11-2016 RB5282 86edd066a105645013857b82c2e0f8aa 578 Gene3D G3DSA:3.30.1120.10 515 553 1.2E-13 T 11-11-2016 RB1355 5fe350041175ed2690216f10d611ff27 243 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 216 3.8E-18 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RB1355 5fe350041175ed2690216f10d611ff27 243 SUPERFAMILY SSF100950 2 235 4.61E-54 T 11-11-2016 RB1355 5fe350041175ed2690216f10d611ff27 243 Gene3D G3DSA:3.40.50.1360 5 231 2.2E-56 T 11-11-2016 RB470 cc8395be0a0431efc0e2f17a05d58f96 85 SUPERFAMILY SSF53098 12 85 1.82E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB470 cc8395be0a0431efc0e2f17a05d58f96 85 Pfam PF00665 Integrase core domain 15 85 3.2E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB470 cc8395be0a0431efc0e2f17a05d58f96 85 Gene3D G3DSA:3.30.420.10 12 84 5.4E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB206 31aa07a169175749ea024c599af48a79 35 Pfam PF07625 Protein of unknown function (DUF1586) 3 19 1.1E-9 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB3340 53110e3dd021b8792445f4f22f502fb0 276 SUPERFAMILY SSF100950 24 267 1.86E-85 T 11-11-2016 RB3340 53110e3dd021b8792445f4f22f502fb0 276 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 23 271 1.8E-72 T 11-11-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RB3340 53110e3dd021b8792445f4f22f502fb0 276 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 31 255 2.8E-19 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RB3340 53110e3dd021b8792445f4f22f502fb0 276 Gene3D G3DSA:3.40.50.1360 25 268 3.8E-88 T 11-11-2016 RB10942 6c42f984a9b8e392f0afc304bd5b839b 531 SUPERFAMILY SSF48452 71 158 4.07E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10942 6c42f984a9b8e392f0afc304bd5b839b 531 Gene3D G3DSA:1.25.40.10 72 152 2.2E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB10942 6c42f984a9b8e392f0afc304bd5b839b 531 SMART SM00028 83 116 0.11 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10942 6c42f984a9b8e392f0afc304bd5b839b 531 SMART SM00028 117 150 0.14 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB10942 6c42f984a9b8e392f0afc304bd5b839b 531 Pfam PF13432 Tetratricopeptide repeat 89 150 9.8E-7 T 11-11-2016 RB2051 8543d96db958c1464031843385b8d40b 367 Pfam PF04338 Protein of unknown function, DUF481 158 367 2.5E-42 T 11-11-2016 IPR007433 Protein of unknown function DUF481 RB6883 8718dd10196b57495b88e414bf4c9040 255 Pfam PF00005 ABC transporter 28 182 3.9E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB6883 8718dd10196b57495b88e414bf4c9040 255 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB6883 8718dd10196b57495b88e414bf4c9040 255 SUPERFAMILY SSF52540 8 235 1.7E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6883 8718dd10196b57495b88e414bf4c9040 255 Gene3D G3DSA:3.40.50.300 8 233 2.0E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6883 8718dd10196b57495b88e414bf4c9040 255 SMART SM00382 37 233 1.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB7989 8329945beea829814472d76249030460 733 Pfam PF07587 Protein of unknown function (DUF1553) 419 677 1.2E-94 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB7989 8329945beea829814472d76249030460 733 Pfam PF07583 Protein of unknown function (DUF1549) 5 63 1.1E-21 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB9356 6d5200bdf0d9e8f97dda2d8588773bb4 129 Pfam PF07617 Protein of unknown function (DUF1579) 4 125 2.4E-28 T 11-11-2016 IPR011473 Protein of unknown function DUF1579 RB716 a1819a235ca4a99b2c15fe053ef62f9f 528 SUPERFAMILY SSF53649 345 509 3.6E-22 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB716 a1819a235ca4a99b2c15fe053ef62f9f 528 Pfam PF07394 Protein of unknown function (DUF1501) 101 527 1.0E-153 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB716 a1819a235ca4a99b2c15fe053ef62f9f 528 Gene3D G3DSA:3.40.720.10 396 509 2.2E-7 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3271 2ec87f04a045b0e80b9110badb6b7a76 327 SMART SM00220 27 325 5.0E-33 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB3271 2ec87f04a045b0e80b9110badb6b7a76 327 SUPERFAMILY SSF56112 20 193 7.42E-57 T 11-11-2016 IPR011009 Protein kinase-like domain RB3271 2ec87f04a045b0e80b9110badb6b7a76 327 SUPERFAMILY SSF56112 219 317 7.42E-57 T 11-11-2016 IPR011009 Protein kinase-like domain RB3271 2ec87f04a045b0e80b9110badb6b7a76 327 Pfam PF00069 Protein kinase domain 30 310 2.4E-34 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB3271 2ec87f04a045b0e80b9110badb6b7a76 327 Gene3D G3DSA:3.30.200.20 20 145 3.0E-20 T 11-11-2016 RB3271 2ec87f04a045b0e80b9110badb6b7a76 327 Gene3D G3DSA:1.10.510.10 146 316 4.9E-35 T 11-11-2016 RB6759 7bbdfed9b64a6db2bcad21818eeee6c7 333 Hamap MF_00486 Methenyltetrahydromethanopterin cyclohydrolase [mch]. 1 333 124.045 T 11-11-2016 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723 RB6759 7bbdfed9b64a6db2bcad21818eeee6c7 333 TIGRFAM TIGR03120 one_C_mch: methenyltetrahydromethanopterin cyclohydrolase 18 332 5.7E-132 T 11-11-2016 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723 RB6759 7bbdfed9b64a6db2bcad21818eeee6c7 333 Gene3D G3DSA:3.30.1030.10 185 333 5.1E-77 T 11-11-2016 RB6759 7bbdfed9b64a6db2bcad21818eeee6c7 333 Gene3D G3DSA:3.30.1030.10 58 108 5.1E-77 T 11-11-2016 RB6759 7bbdfed9b64a6db2bcad21818eeee6c7 333 Pfam PF02289 Cyclohydrolase (MCH) 44 331 1.9E-105 T 11-11-2016 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723 RB6759 7bbdfed9b64a6db2bcad21818eeee6c7 333 SUPERFAMILY SSF56199 17 333 7.98E-111 T 11-11-2016 RB6518 f6070047319c85e629ac926191a8cb91 544 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 404 490 7.2E-14 T 11-11-2016 RB6518 f6070047319c85e629ac926191a8cb91 544 Gene3D G3DSA:2.60.120.200 385 498 1.6E-17 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB6518 f6070047319c85e629ac926191a8cb91 544 SUPERFAMILY SSF49899 246 495 1.58E-25 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB11168 b5beebc89da6672bb38f74bbb76188bc 149 Gene3D G3DSA:3.40.250.10 21 122 3.9E-16 T 11-11-2016 IPR001763 Rhodanese-like domain RB11168 b5beebc89da6672bb38f74bbb76188bc 149 SUPERFAMILY SSF52821 4 125 7.55E-20 T 11-11-2016 IPR001763 Rhodanese-like domain RB11168 b5beebc89da6672bb38f74bbb76188bc 149 SMART SM00450 29 120 9.0E-6 T 11-11-2016 IPR001763 Rhodanese-like domain RB11168 b5beebc89da6672bb38f74bbb76188bc 149 Pfam PF00581 Rhodanese-like domain 32 116 1.7E-4 T 11-11-2016 IPR001763 Rhodanese-like domain RB256 5cd2a729b8ce77da8e8bf6388b310778 299 SUPERFAMILY SSF55021 3 85 3.02E-7 T 11-11-2016 RB256 5cd2a729b8ce77da8e8bf6388b310778 299 PIRSF PIRSF036480 1 289 3.3E-80 T 11-11-2016 RB256 5cd2a729b8ce77da8e8bf6388b310778 299 Gene3D G3DSA:3.40.50.170 92 281 3.1E-31 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB256 5cd2a729b8ce77da8e8bf6388b310778 299 SUPERFAMILY SSF53328 93 282 3.4E-30 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB256 5cd2a729b8ce77da8e8bf6388b310778 299 Pfam PF00551 Formyl transferase 102 261 3.0E-17 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RB256 5cd2a729b8ce77da8e8bf6388b310778 299 Gene3D G3DSA:3.30.70.260 2 81 4.5E-8 T 11-11-2016 RB256 5cd2a729b8ce77da8e8bf6388b310778 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 115 142 3.4E-5 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RB256 5cd2a729b8ce77da8e8bf6388b310778 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 5 31 3.4E-5 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RB256 5cd2a729b8ce77da8e8bf6388b310778 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 262 287 3.4E-5 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RB7147 274798a8b4fe4a7660179510b238258c 201 Pfam PF01553 Acyltransferase 33 149 5.3E-16 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RB7147 274798a8b4fe4a7660179510b238258c 201 Gene3D G3DSA:3.40.1130.10 33 176 6.6E-10 T 11-11-2016 RB7147 274798a8b4fe4a7660179510b238258c 201 SUPERFAMILY SSF69593 14 200 2.48E-28 T 11-11-2016 RB7147 274798a8b4fe4a7660179510b238258c 201 SMART SM00563 32 152 6.4E-15 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RB5042 25056b32c874f0ba4eaeb5d86670fa7c 267 Pfam PF00753 Metallo-beta-lactamase superfamily 21 209 1.5E-22 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB5042 25056b32c874f0ba4eaeb5d86670fa7c 267 SMART SM00849 23 209 6.6E-29 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB5042 25056b32c874f0ba4eaeb5d86670fa7c 267 Gene3D G3DSA:3.60.15.10 19 229 9.5E-38 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB5042 25056b32c874f0ba4eaeb5d86670fa7c 267 SUPERFAMILY SSF56281 7 227 9.43E-40 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB3884 18934c63c5cf77c60a97aef8754e2259 350 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 107 339 1.1E-90 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 RB3884 18934c63c5cf77c60a97aef8754e2259 350 Pfam PF00696 Amino acid kinase family 109 319 3.1E-31 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB3884 18934c63c5cf77c60a97aef8754e2259 350 SUPERFAMILY SSF53633 106 339 7.07E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB3884 18934c63c5cf77c60a97aef8754e2259 350 Hamap MF_01220_B Uridylate kinase [pyrH]. 105 340 41.689 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 RB3884 18934c63c5cf77c60a97aef8754e2259 350 Gene3D G3DSA:3.40.1160.10 102 339 2.0E-78 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 Gene3D G3DSA:1.25.40.10 930 1060 2.4E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 Gene3D G3DSA:3.30.200.20 96 185 2.1E-20 T 11-11-2016 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 237 249 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SMART SM00028 991 1024 37.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SMART SM00028 1028 1061 5.6 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SMART SM00028 957 990 0.053 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SUPERFAMILY SSF48452 899 1061 2.09E-18 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SMART SM00220 99 403 1.1E-33 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 Gene3D G3DSA:1.25.40.10 739 811 6.7E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 Gene3D G3DSA:1.25.40.10 897 929 6.7E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 Pfam PF00069 Protein kinase domain 107 396 2.2E-33 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 Gene3D G3DSA:2.60.120.260 1121 1285 4.2E-6 T 11-11-2016 IPR008979 Galactose-binding domain-like RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 Gene3D G3DSA:1.10.510.10 214 396 1.1E-38 T 11-11-2016 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SUPERFAMILY SSF48452 848 943 4.13E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SUPERFAMILY SSF48452 673 686 4.13E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SUPERFAMILY SSF48452 733 793 4.13E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5593 edcd4ddb4d2c01de283bc4fddf607c8c 1290 SUPERFAMILY SSF56112 98 396 4.32E-57 T 11-11-2016 IPR011009 Protein kinase-like domain RB617 8a4a77de2640b673a2404c9bb1370452 981 Gene3D G3DSA:2.130.10.10 670 979 1.4E-48 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 SUPERFAMILY SSF46626 106 194 2.93E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB617 8a4a77de2640b673a2404c9bb1370452 981 Pfam PF07635 Planctomycete cytochrome C 121 173 3.3E-8 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB617 8a4a77de2640b673a2404c9bb1370452 981 SUPERFAMILY SSF50978 684 978 5.49E-47 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 Gene3D G3DSA:1.10.760.10 112 191 7.5E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB617 8a4a77de2640b673a2404c9bb1370452 981 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 20 79 3.0E-4 T 11-11-2016 RB617 8a4a77de2640b673a2404c9bb1370452 981 Pfam PF00400 WD domain, G-beta repeat 873 895 0.11 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 Pfam PF00400 WD domain, G-beta repeat 775 810 0.03 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 Pfam PF00400 WD domain, G-beta repeat 740 765 0.04 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 Pfam PF03983 SLA1 homology domain 1, SHD1 19 76 5.9E-12 T 11-11-2016 IPR007131 SLA1 homology domain 1, SHD1 GO:0008092|GO:0030674|GO:0042802|GO:0043130 RB617 8a4a77de2640b673a2404c9bb1370452 981 SMART SM00320 938 978 16.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 SMART SM00320 898 935 52.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 SMART SM00320 725 766 0.0032 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 SMART SM00320 772 811 0.0018 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 SMART SM00320 683 722 0.95 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB617 8a4a77de2640b673a2404c9bb1370452 981 SMART SM00320 860 895 7.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9541 0aad97412da1e77f3803f944e26ef609 470 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 78 263 2.3E-8 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB9541 0aad97412da1e77f3803f944e26ef609 470 Gene3D G3DSA:2.40.50.100 78 112 9.6E-18 T 11-11-2016 RB9541 0aad97412da1e77f3803f944e26ef609 470 Gene3D G3DSA:2.40.50.100 215 249 9.6E-18 T 11-11-2016 RB9541 0aad97412da1e77f3803f944e26ef609 470 SUPERFAMILY SSF111369 66 343 8.37E-47 T 11-11-2016 RB9541 0aad97412da1e77f3803f944e26ef609 470 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 131 419 2.3E-52 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB6697 05efdae503f6232b5a981bfbb6353cb2 210 SUPERFAMILY SSF81301 2 72 1.31E-8 T 11-11-2016 RB6697 05efdae503f6232b5a981bfbb6353cb2 210 Gene3D G3DSA:3.30.460.10 3 41 2.4E-7 T 11-11-2016 RB6697 05efdae503f6232b5a981bfbb6353cb2 210 Pfam PF01909 Nucleotidyltransferase domain 3 33 1.4E-4 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RB5170 5933e0b6a32c08e9d2fcbcdfc41d61f5 185 Pfam PF01478 Type IV leader peptidase family 16 116 2.3E-15 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RB4915 0808e05ed5b4978e4a0d77068ef2be59 246 Gene3D G3DSA:1.20.5.620 71 104 1.7E-4 T 11-11-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RB4915 0808e05ed5b4978e4a0d77068ef2be59 246 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 157 11.257 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RB4915 0808e05ed5b4978e4a0d77068ef2be59 246 Pfam PF00430 ATP synthase B/B' CF(0) 7 137 6.2E-16 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RB4915 0808e05ed5b4978e4a0d77068ef2be59 246 TIGRFAM TIGR03321 alt_F1F0_F0_B: alternate F1F0 ATPase, F0 subunit B 1 245 3.6E-98 T 11-11-2016 IPR017707 Alternate F1F0 ATPase, F0 subunit B RB8866 76c7de6382c874c6b45325799b1858b8 445 Gene3D G3DSA:2.130.10.10 207 436 3.0E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB5616 2e3a6603550dfa7c8f22112fc8a74d60 699 Gene3D G3DSA:3.40.50.1820 62 367 8.6E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5616 2e3a6603550dfa7c8f22112fc8a74d60 699 Pfam PF05448 Acetyl xylan esterase (AXE1) 105 260 1.0E-7 T 11-11-2016 IPR008391 Acetyl xylan esterase RB5616 2e3a6603550dfa7c8f22112fc8a74d60 699 SUPERFAMILY SSF53474 55 372 1.93E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3160 27e4cd8c4235613fdbc03702054e5806 316 SUPERFAMILY SSF54523 6 82 7.61E-19 T 11-11-2016 RB3160 27e4cd8c4235613fdbc03702054e5806 316 Gene3D G3DSA:3.30.700.10 6 55 2.8E-6 T 11-11-2016 RB3160 27e4cd8c4235613fdbc03702054e5806 316 Pfam PF07596 Protein of unknown function (DUF1559) 30 296 2.9E-63 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB3160 27e4cd8c4235613fdbc03702054e5806 316 Pfam PF13633 Prokaryotic N-terminal methylation site 4 29 3.1E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3160 27e4cd8c4235613fdbc03702054e5806 316 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3956 e4ddd9202bac9674b9505b80c7d7e8a2 489 Gene3D G3DSA:3.40.720.10 150 341 1.7E-41 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3956 e4ddd9202bac9674b9505b80c7d7e8a2 489 Gene3D G3DSA:3.40.720.10 38 149 6.0E-29 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3956 e4ddd9202bac9674b9505b80c7d7e8a2 489 Pfam PF00884 Sulfatase 40 303 3.6E-47 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3956 e4ddd9202bac9674b9505b80c7d7e8a2 489 Gene3D G3DSA:3.30.1120.10 394 439 6.3E-22 T 11-11-2016 RB3956 e4ddd9202bac9674b9505b80c7d7e8a2 489 Gene3D G3DSA:3.30.1120.10 342 357 6.3E-22 T 11-11-2016 RB3956 e4ddd9202bac9674b9505b80c7d7e8a2 489 SUPERFAMILY SSF53649 392 437 3.2E-96 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3956 e4ddd9202bac9674b9505b80c7d7e8a2 489 SUPERFAMILY SSF53649 39 355 3.2E-96 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB11207 96cf8f917209af8e3f1287aaddaca771 538 Pfam PF09335 SNARE associated Golgi protein 69 187 2.7E-31 T 11-11-2016 IPR032816 SNARE associated Golgi protein RB11207 96cf8f917209af8e3f1287aaddaca771 538 Pfam PF04784 Protein of unknown function, DUF547 355 459 4.0E-24 T 11-11-2016 IPR006869 Domain of unknown function DUF547 RB12502 f1d837a35c7079547a7befbee5dd2adb 435 Pfam PF14841 FliG middle domain 144 213 6.0E-18 T 11-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain RB12502 f1d837a35c7079547a7befbee5dd2adb 435 SUPERFAMILY SSF48029 144 228 3.14E-15 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB12502 f1d837a35c7079547a7befbee5dd2adb 435 Gene3D G3DSA:1.10.220.30 350 421 1.0E-7 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB12502 f1d837a35c7079547a7befbee5dd2adb 435 SUPERFAMILY SSF48029 16 82 1.57E-8 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB12502 f1d837a35c7079547a7befbee5dd2adb 435 SUPERFAMILY SSF48029 349 422 4.84E-7 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB12502 f1d837a35c7079547a7befbee5dd2adb 435 Gene3D G3DSA:1.10.220.30 18 76 3.9E-7 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB12502 f1d837a35c7079547a7befbee5dd2adb 435 Gene3D G3DSA:1.10.220.30 131 216 6.6E-20 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical RB5615 cb8a31922453c4181cfd4b5d0e38660c 375 Gene3D G3DSA:1.25.40.10 81 139 2.8E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5615 cb8a31922453c4181cfd4b5d0e38660c 375 Gene3D G3DSA:1.25.40.10 215 266 2.8E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5615 cb8a31922453c4181cfd4b5d0e38660c 375 SUPERFAMILY SSF48452 75 142 5.69E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8824 8bb6abfc501ed56075f1dce860f01d21 187 SUPERFAMILY SSF53927 40 180 8.89E-35 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 RB8824 8bb6abfc501ed56075f1dce860f01d21 187 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 42 135 3.3E-18 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RB8824 8bb6abfc501ed56075f1dce860f01d21 187 Gene3D G3DSA:3.40.140.10 39 172 9.1E-32 T 11-11-2016 RB12891 04ca7711f41e7f25a00b13fb48c1ffaa 258 Gene3D G3DSA:3.40.50.10320 3 232 9.0E-44 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB12891 04ca7711f41e7f25a00b13fb48c1ffaa 258 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 125 2.1E-18 T 11-11-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RB12891 04ca7711f41e7f25a00b13fb48c1ffaa 258 SUPERFAMILY SSF102588 2 233 1.57E-42 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB5356 a9f8101a37845bdb526859b35702ce81 422 SUPERFAMILY SSF54523 76 200 1.88E-21 T 11-11-2016 RB5356 a9f8101a37845bdb526859b35702ce81 422 Gene3D G3DSA:3.30.700.10 76 141 1.0E-8 T 11-11-2016 RB5356 a9f8101a37845bdb526859b35702ce81 422 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 73 95 8.8E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5356 a9f8101a37845bdb526859b35702ce81 422 Pfam PF13633 Prokaryotic N-terminal methylation site 74 99 5.5E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5356 a9f8101a37845bdb526859b35702ce81 422 Pfam PF07596 Protein of unknown function (DUF1559) 100 405 1.1E-79 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5356 a9f8101a37845bdb526859b35702ce81 422 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 74 94 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13002 537268ce7f30194435118f2b5b2310ee 389 Pfam PF04389 Peptidase family M28 165 383 3.2E-39 T 11-11-2016 IPR007484 Peptidase M28 RB13002 537268ce7f30194435118f2b5b2310ee 389 SUPERFAMILY SSF53187 92 379 6.86E-33 T 11-11-2016 RB13002 537268ce7f30194435118f2b5b2310ee 389 Gene3D G3DSA:3.40.630.10 99 383 1.7E-31 T 11-11-2016 RB1430 0995d071667ab33b0689147cb758c17c 536 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 91 137 2.4E-7 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1430 0995d071667ab33b0689147cb758c17c 536 Pfam PF00361 Proton-conducting membrane transporter 151 449 1.3E-51 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1430 0995d071667ab33b0689147cb758c17c 536 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 266 292 2.6E-17 T 11-11-2016 RB1430 0995d071667ab33b0689147cb758c17c 536 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 443 462 2.6E-17 T 11-11-2016 RB1430 0995d071667ab33b0689147cb758c17c 536 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 98 123 2.6E-17 T 11-11-2016 RB1430 0995d071667ab33b0689147cb758c17c 536 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 265 2.6E-17 T 11-11-2016 RB3400 e8cd8f347caf342cab26c59d9016a94e 413 Pfam PF13633 Prokaryotic N-terminal methylation site 11 36 2.8E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB3400 e8cd8f347caf342cab26c59d9016a94e 413 SUPERFAMILY SSF54523 13 158 1.02E-26 T 11-11-2016 RB3400 e8cd8f347caf342cab26c59d9016a94e 413 Pfam PF07596 Protein of unknown function (DUF1559) 37 374 2.2E-60 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB3400 e8cd8f347caf342cab26c59d9016a94e 413 Gene3D G3DSA:3.30.700.10 13 73 1.4E-6 T 11-11-2016 RB3400 e8cd8f347caf342cab26c59d9016a94e 413 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 4.4E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5208 0d14d8533ba06d81a06edb17c7cec283 274 SUPERFAMILY SSF52317 40 265 3.93E-17 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB5208 0d14d8533ba06d81a06edb17c7cec283 274 PIRSF PIRSF016642 15 274 1.5E-102 T 11-11-2016 IPR015834 Uncharacterised conserved protein UCP016642 RB5208 0d14d8533ba06d81a06edb17c7cec283 274 Pfam PF09825 Biotin-protein ligase, N terminal 41 148 3.0E-12 T 11-11-2016 IPR019197 Biotin-protein ligase, N-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RB5208 0d14d8533ba06d81a06edb17c7cec283 274 Gene3D G3DSA:3.40.50.880 68 257 1.8E-12 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 151 231 1.5E-22 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 127 1.6E-19 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 Gene3D G3DSA:1.10.8.50 145 286 1.5E-41 T 11-11-2016 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 SMART SM00898 2 130 2.1E-18 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 Pfam PF06827 Zinc finger found in FPG and IleRS 260 285 2.2E-5 T 11-11-2016 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 SUPERFAMILY SSF46946 144 232 1.7E-25 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 SUPERFAMILY SSF81624 2 149 2.49E-20 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 SMART SM01232 145 235 2.1E-35 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 Gene3D G3DSA:3.20.190.10 2 137 3.6E-22 T 11-11-2016 RB7569 2d2d2755a5e06e23a0761ea325bf2576 300 SUPERFAMILY SSF57716 235 286 1.69E-12 T 11-11-2016 RB5051 723c7ab369ef72a43c009601e475c267 376 Gene3D G3DSA:3.50.50.60 148 320 3.5E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5051 723c7ab369ef72a43c009601e475c267 376 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 21 313 2.3E-65 T 11-11-2016 RB5051 723c7ab369ef72a43c009601e475c267 376 SUPERFAMILY SSF51905 14 260 7.05E-37 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5051 723c7ab369ef72a43c009601e475c267 376 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 304 322 1.2E-18 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB5051 723c7ab369ef72a43c009601e475c267 376 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 19 41 1.2E-18 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB5051 723c7ab369ef72a43c009601e475c267 376 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 137 145 1.2E-18 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB5051 723c7ab369ef72a43c009601e475c267 376 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 196 1.2E-18 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB5051 723c7ab369ef72a43c009601e475c267 376 Gene3D G3DSA:3.50.50.60 18 147 3.4E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5051 723c7ab369ef72a43c009601e475c267 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 1.3E-13 T 11-11-2016 RB5051 723c7ab369ef72a43c009601e475c267 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 20 39 1.3E-13 T 11-11-2016 RB5051 723c7ab369ef72a43c009601e475c267 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 1.3E-13 T 11-11-2016 RB5051 723c7ab369ef72a43c009601e475c267 376 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 1.3E-13 T 11-11-2016 RB13260 18853fde623914258bc3635bc6280613 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 324 1.1E-144 T 11-11-2016 IPR014188 Acrylyl-CoA reductase AcuI RB13260 18853fde623914258bc3635bc6280613 326 SUPERFAMILY SSF51735 116 284 2.63E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB13260 18853fde623914258bc3635bc6280613 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 6.9E-6 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB13260 18853fde623914258bc3635bc6280613 326 SMART SM00829 8 322 1.8E-6 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB13260 18853fde623914258bc3635bc6280613 326 Gene3D G3DSA:3.90.180.10 1 86 2.9E-8 T 11-11-2016 IPR011032 GroES-like RB13260 18853fde623914258bc3635bc6280613 326 SUPERFAMILY SSF50129 1 145 4.87E-47 T 11-11-2016 IPR011032 GroES-like RB13260 18853fde623914258bc3635bc6280613 326 Pfam PF00107 Zinc-binding dehydrogenase 158 282 1.1E-14 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB13260 18853fde623914258bc3635bc6280613 326 Gene3D G3DSA:3.40.50.720 125 291 4.0E-78 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7985 663284799da1cc829ebc3d2958502840 471 Pfam PF14534 Domain of unknown function (DUF4440) 352 459 1.2E-8 T 11-11-2016 IPR027843 Domain of unknown function DUF4440 RB7985 663284799da1cc829ebc3d2958502840 471 Gene3D G3DSA:3.10.450.50 346 465 1.4E-46 T 11-11-2016 IPR032710 NTF2-like domain RB7985 663284799da1cc829ebc3d2958502840 471 Pfam PF01112 Asparaginase 33 323 4.4E-107 T 11-11-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RB7985 663284799da1cc829ebc3d2958502840 471 SUPERFAMILY SSF56235 32 326 5.14E-89 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB7985 663284799da1cc829ebc3d2958502840 471 SUPERFAMILY SSF54427 348 465 4.52E-27 T 11-11-2016 IPR032710 NTF2-like domain RB4653 182496715f2319b49778b6131ece8fdc 70 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 7 70 2.6E-22 T 11-11-2016 IPR010035 ThiS, thiamine-biosynthesis RB4653 182496715f2319b49778b6131ece8fdc 70 Pfam PF02597 ThiS family 7 70 3.8E-11 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 RB4653 182496715f2319b49778b6131ece8fdc 70 Gene3D G3DSA:3.10.20.30 5 70 3.1E-22 T 11-11-2016 IPR012675 Beta-grasp domain RB4653 182496715f2319b49778b6131ece8fdc 70 SUPERFAMILY SSF54285 7 69 1.96E-16 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RB8551 4387e2cf0f48b421a86ffd9872f7a846 378 Gene3D G3DSA:3.90.25.10 268 377 6.3E-9 T 11-11-2016 RB8551 4387e2cf0f48b421a86ffd9872f7a846 378 SUPERFAMILY SSF51735 342 377 1.24E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8551 4387e2cf0f48b421a86ffd9872f7a846 378 SUPERFAMILY SSF51735 48 309 1.24E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8551 4387e2cf0f48b421a86ffd9872f7a846 378 Gene3D G3DSA:3.40.50.720 47 267 2.1E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8551 4387e2cf0f48b421a86ffd9872f7a846 378 Pfam PF01370 NAD dependent epimerase/dehydratase family 50 236 1.5E-22 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB7445 bcb09b0cff1eed924592755e701cfb23 545 Pfam PF01514 Secretory protein of YscJ/FliF family 30 216 2.0E-13 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF RB7445 bcb09b0cff1eed924592755e701cfb23 545 Pfam PF08345 Flagellar M-ring protein C-terminal 247 386 8.9E-8 T 11-11-2016 IPR013556 Flagellar M-ring C-terminal RB4544 84fdf43a6c301cf40836b02be1b1856d 158 Pfam PF14343 PrcB C-terminal 86 141 7.7E-10 T 11-11-2016 IPR025748 PrcB C-terminal domain RB430 cabfe4e284262b9be84bb616e91ae3e8 522 Pfam PF07394 Protein of unknown function (DUF1501) 95 521 3.8E-154 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB430 cabfe4e284262b9be84bb616e91ae3e8 522 SUPERFAMILY SSF53649 334 506 7.52E-17 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3926 5537f848f912f6e311437911042227aa 85 Pfam PF14357 Domain of unknown function (DUF4404) 5 85 1.4E-21 T 11-11-2016 IPR025516 Protein of unknown function DUF4404 RB3680 babe1011bc5583387408691f404c3cc3 180 SUPERFAMILY SSF46785 27 158 2.02E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3680 babe1011bc5583387408691f404c3cc3 180 Pfam PF02082 Transcriptional regulator 24 104 5.7E-21 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type RB3680 babe1011bc5583387408691f404c3cc3 180 Gene3D G3DSA:1.10.10.10 24 164 5.7E-42 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3123 31066d679b53539787bcd26804d8b918 432 SUPERFAMILY SSF49899 28 287 2.81E-59 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB3123 31066d679b53539787bcd26804d8b918 432 Gene3D G3DSA:2.60.120.200 22 291 1.1E-56 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB3123 31066d679b53539787bcd26804d8b918 432 Pfam PF00722 Glycosyl hydrolases family 16 94 239 3.7E-18 T 11-11-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 RB3123 31066d679b53539787bcd26804d8b918 432 Gene3D G3DSA:2.60.120.260 299 428 2.2E-5 T 11-11-2016 IPR008979 Galactose-binding domain-like RB11313 a0459a7db520dd08b43e16cf48f9f5b6 298 Gene3D G3DSA:1.10.10.10 1 68 1.4E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11313 a0459a7db520dd08b43e16cf48f9f5b6 298 SUPERFAMILY SSF46785 3 68 2.47E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11313 a0459a7db520dd08b43e16cf48f9f5b6 298 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 115 285 3.5E-59 T 11-11-2016 IPR012912 Plasmid pRiA4b, Orf3 RB11313 a0459a7db520dd08b43e16cf48f9f5b6 298 Pfam PF01726 LexA DNA binding domain 1 63 3.9E-10 T 11-11-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RB11313 a0459a7db520dd08b43e16cf48f9f5b6 298 Gene3D G3DSA:3.10.290.30 112 286 1.2E-54 T 11-11-2016 IPR024047 Protein MM3350-like domain RB11313 a0459a7db520dd08b43e16cf48f9f5b6 298 SUPERFAMILY SSF159941 114 286 1.31E-53 T 11-11-2016 IPR024047 Protein MM3350-like domain RB1140 d170eacb61e4844c705b23ecb1b9400e 211 SMART SM00421 139 196 7.0E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 Pfam PF00072 Response regulator receiver domain 6 115 1.0E-11 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 Gene3D G3DSA:1.10.10.10 144 197 1.2E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1140 d170eacb61e4844c705b23ecb1b9400e 211 SUPERFAMILY SSF52172 4 159 1.71E-16 T 11-11-2016 IPR011006 CheY-like superfamily RB1140 d170eacb61e4844c705b23ecb1b9400e 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 5.4E-20 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 SMART SM00448 4 115 0.0028 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 SUPERFAMILY SSF46894 124 197 7.14E-20 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 6.8E-14 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 6.8E-14 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 6.8E-14 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RB1140 d170eacb61e4844c705b23ecb1b9400e 211 Gene3D G3DSA:3.40.50.2300 4 143 7.2E-18 T 11-11-2016 RB6767 49e826f8ed2353a95fa7f110ffc76fb6 671 Gene3D G3DSA:1.10.486.10 398 549 2.6E-33 T 11-11-2016 RB6767 49e826f8ed2353a95fa7f110ffc76fb6 671 Gene3D G3DSA:3.40.50.300 8 285 5.0E-80 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6767 49e826f8ed2353a95fa7f110ffc76fb6 671 SUPERFAMILY SSF52540 7 654 5.52E-161 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6767 49e826f8ed2353a95fa7f110ffc76fb6 671 Gene3D G3DSA:3.40.50.300 290 397 5.4E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6767 49e826f8ed2353a95fa7f110ffc76fb6 671 Gene3D G3DSA:3.40.50.300 565 652 5.4E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6767 49e826f8ed2353a95fa7f110ffc76fb6 671 Pfam PF13361 UvrD-like helicase C-terminal domain 287 630 7.2E-64 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RB6767 49e826f8ed2353a95fa7f110ffc76fb6 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 279 7.2E-72 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RB11533 6ea71b1d92ed9f0fe251e4a89acdff90 445 Gene3D G3DSA:3.40.50.300 309 437 8.4E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11533 6ea71b1d92ed9f0fe251e4a89acdff90 445 SUPERFAMILY SSF52540 216 436 4.18E-17 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11533 6ea71b1d92ed9f0fe251e4a89acdff90 445 Pfam PF00685 Sulfotransferase domain 296 437 3.7E-6 T 11-11-2016 IPR000863 Sulfotransferase domain GO:0008146 RB11533 6ea71b1d92ed9f0fe251e4a89acdff90 445 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 48 135 1.2E-9 T 11-11-2016 IPR002654 Glycosyl transferase, family 25 RB8073 30a1bdcc321e986c8d673330e8f016e0 366 SUPERFAMILY SSF75005 16 343 2.66E-49 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB8073 30a1bdcc321e986c8d673330e8f016e0 366 Pfam PF04616 Glycosyl hydrolases family 43 43 342 6.4E-40 T 11-11-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 RB8073 30a1bdcc321e986c8d673330e8f016e0 366 PIRSF PIRSF025414 5 360 1.1E-111 T 11-11-2016 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55 RB8073 30a1bdcc321e986c8d673330e8f016e0 366 Gene3D G3DSA:2.115.10.20 39 359 2.3E-68 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 SUPERFAMILY SSF51569 76 402 1.13E-131 T 11-11-2016 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 Gene3D G3DSA:3.20.20.70 76 402 4.4E-138 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 320 332 - T 11-11-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 SMART SM01004 78 401 3.8E-218 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 Pfam PF00490 Delta-aminolevulinic acid dehydratase 81 399 3.5E-129 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 228 247 7.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 345 360 7.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 285 7.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 375 394 7.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 212 7.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB1856 70cbafb3dbdcbcb803615d56d8e47f39 404 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 320 336 7.5E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RB9710 5321927bf10c32ac8f581569b67474cc 1631 SMART SM00327 1076 1315 1.1E-10 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9710 5321927bf10c32ac8f581569b67474cc 1631 SUPERFAMILY SSF53300 1077 1140 2.97E-18 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9710 5321927bf10c32ac8f581569b67474cc 1631 SUPERFAMILY SSF53300 1182 1317 2.97E-18 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9710 5321927bf10c32ac8f581569b67474cc 1631 Gene3D G3DSA:3.40.50.410 1184 1310 2.1E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9710 5321927bf10c32ac8f581569b67474cc 1631 Gene3D G3DSA:3.40.50.410 1079 1142 2.1E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A RB1767 d478435f7dad15cfe522d1fd57284111 907 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 691 721 4.4E-5 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB1767 d478435f7dad15cfe522d1fd57284111 907 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 468 510 1.7E-9 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB1767 d478435f7dad15cfe522d1fd57284111 907 Pfam PF01345 Domain of unknown function DUF11 556 616 3.9E-7 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB1767 d478435f7dad15cfe522d1fd57284111 907 Pfam PF01345 Domain of unknown function DUF11 464 509 8.6E-8 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB4285 b235ddf9b13694219312107073e40ac7 841 SUPERFAMILY SSF48484 456 730 8.11E-10 T 11-11-2016 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 RB4285 b235ddf9b13694219312107073e40ac7 841 Gene3D G3DSA:1.20.245.10 459 785 9.9E-12 T 11-11-2016 RB8799 897e690a2ba159c565500ef8067ca815 478 Gene3D G3DSA:3.40.50.720 80 311 1.0E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8799 897e690a2ba159c565500ef8067ca815 478 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 82 197 1.4E-18 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB8799 897e690a2ba159c565500ef8067ca815 478 SUPERFAMILY SSF51735 75 228 1.51E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8799 897e690a2ba159c565500ef8067ca815 478 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 269 298 0.032 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RB8799 897e690a2ba159c565500ef8067ca815 478 SUPERFAMILY SSF55347 206 419 5.72E-18 T 11-11-2016 RB8329 1ff00275785271bb741772f23a273603 250 PIRSF PIRSF006293 20 249 8.9E-77 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RB8329 1ff00275785271bb741772f23a273603 250 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 24 235 4.4E-62 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RB8329 1ff00275785271bb741772f23a273603 250 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 22 248 54.997 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RB8329 1ff00275785271bb741772f23a273603 250 SUPERFAMILY SSF52402 22 248 2.43E-64 T 11-11-2016 RB8329 1ff00275785271bb741772f23a273603 250 Gene3D G3DSA:3.40.50.620 23 247 1.7E-79 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB8329 1ff00275785271bb741772f23a273603 250 Pfam PF06508 Queuosine biosynthesis protein QueC 23 242 1.5E-76 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RB9494 56cf32a3f00bbe8607001cc7540b099e 285 SUPERFAMILY SSF51182 3 283 1.37E-77 T 11-11-2016 IPR011051 RmlC-like cupin domain RB9494 56cf32a3f00bbe8607001cc7540b099e 285 Gene3D G3DSA:2.60.120.10 3 255 7.4E-78 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB9494 56cf32a3f00bbe8607001cc7540b099e 285 Pfam PF02678 Pirin 28 126 8.0E-34 T 11-11-2016 IPR003829 Pirin, N-terminal domain RB9494 56cf32a3f00bbe8607001cc7540b099e 285 PIRSF PIRSF006232 2 285 9.0E-87 T 11-11-2016 IPR012093 Pirin RB9494 56cf32a3f00bbe8607001cc7540b099e 285 Pfam PF05726 Pirin C-terminal cupin domain 182 282 3.5E-27 T 11-11-2016 IPR008778 Pirin, C-terminal domain RB10144 6726561181e3dd7a90986a9649616b7b 319 Pfam PF00326 Prolyl oligopeptidase family 154 313 2.7E-16 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB10144 6726561181e3dd7a90986a9649616b7b 319 SUPERFAMILY SSF53474 87 312 1.54E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10144 6726561181e3dd7a90986a9649616b7b 319 Gene3D G3DSA:3.40.50.1820 84 313 1.5E-64 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6574 f94cbe5d9d5ecea0f3f16b72015bbdbd 723 Pfam PF07626 Protein of unknown function (DUF1587) 226 264 1.8E-5 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB6574 f94cbe5d9d5ecea0f3f16b72015bbdbd 723 Pfam PF07624 Protein of unknown function (DUF1585) 639 709 1.5E-20 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB6574 f94cbe5d9d5ecea0f3f16b72015bbdbd 723 Pfam PF07637 Protein of unknown function (DUF1595) 294 353 5.9E-13 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB6574 f94cbe5d9d5ecea0f3f16b72015bbdbd 723 Pfam PF07631 Protein of unknown function (DUF1592) 365 494 5.8E-34 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB6574 f94cbe5d9d5ecea0f3f16b72015bbdbd 723 Pfam PF07627 Protein of unknown function (DUF1588) 523 621 9.5E-29 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB3579 5d06e0295b0ee69679eba4f5e57bad1c 345 SUPERFAMILY SSF53474 44 325 4.93E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3579 5d06e0295b0ee69679eba4f5e57bad1c 345 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 83 147 1.2E-6 T 11-11-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 RB3579 5d06e0295b0ee69679eba4f5e57bad1c 345 Gene3D G3DSA:3.40.50.1820 47 322 7.1E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8807 c25cce45c3de525da96c3a85454aca9c 411 Pfam PF04367 Protein of unknown function (DUF502) 238 343 5.9E-28 T 11-11-2016 IPR007462 Protein of unknown function DUF502 RB6238 7a548e1b55d82a3ca7e6d145c25d858b 398 Pfam PF00571 CBS domain 296 345 4.3E-5 T 11-11-2016 IPR000644 CBS domain RB6238 7a548e1b55d82a3ca7e6d145c25d858b 398 Pfam PF01595 Domain of unknown function DUF21 7 182 2.7E-34 T 11-11-2016 IPR002550 Domain of unknown function DUF21 RB6238 7a548e1b55d82a3ca7e6d145c25d858b 398 Gene3D G3DSA:3.10.580.10 185 348 7.3E-14 T 11-11-2016 RB6238 7a548e1b55d82a3ca7e6d145c25d858b 398 SMART SM00116 297 345 0.0019 T 11-11-2016 IPR000644 CBS domain RB6238 7a548e1b55d82a3ca7e6d145c25d858b 398 SUPERFAMILY SSF54631 252 359 6.7E-18 T 11-11-2016 RB9260 f0ddde7615c9b1ab16c09853b37ff2e1 426 Pfam PF13620 Carboxypeptidase regulatory-like domain 68 118 2.1E-8 T 11-11-2016 RB9260 f0ddde7615c9b1ab16c09853b37ff2e1 426 SUPERFAMILY SSF49478 68 132 3.73E-8 T 11-11-2016 RB9260 f0ddde7615c9b1ab16c09853b37ff2e1 426 Gene3D G3DSA:2.60.40.10 224 254 1.6E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB9260 f0ddde7615c9b1ab16c09853b37ff2e1 426 Gene3D G3DSA:2.60.40.10 69 119 8.2E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB13271 3e119cbb536e01b4cf920c4e93fb1e5c 341 Gene3D G3DSA:3.30.1490.20 115 193 2.1E-10 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RB13271 3e119cbb536e01b4cf920c4e93fb1e5c 341 SUPERFAMILY SSF56059 113 330 2.53E-34 T 11-11-2016 RB13271 3e119cbb536e01b4cf920c4e93fb1e5c 341 Gene3D G3DSA:3.30.470.20 102 114 1.4E-29 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB13271 3e119cbb536e01b4cf920c4e93fb1e5c 341 Gene3D G3DSA:3.30.470.20 194 331 1.4E-29 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB13271 3e119cbb536e01b4cf920c4e93fb1e5c 341 Pfam PF07478 D-ala D-ala ligase C-terminus 143 329 2.6E-28 T 11-11-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RB3946 8d86fae65570133f874737d07db58505 449 Pfam PF03942 DTW domain 77 257 3.3E-46 T 11-11-2016 IPR005636 DTW RB3946 8d86fae65570133f874737d07db58505 449 SMART SM01144 75 262 8.7E-54 T 11-11-2016 IPR005636 DTW RB11914 e1385d011119735624ecd157ca4ac3c7 456 Pfam PF01882 Protein of unknown function DUF58 247 343 3.0E-17 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB7998 ea376769cb684a4f55c1db34f5a438e9 345 SUPERFAMILY SSF51735 50 326 2.7E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7998 ea376769cb684a4f55c1db34f5a438e9 345 Pfam PF01370 NAD dependent epimerase/dehydratase family 50 203 2.5E-9 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB7998 ea376769cb684a4f55c1db34f5a438e9 345 Gene3D G3DSA:3.40.50.720 38 204 1.6E-9 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2434 b4f92d2f3edfdbf7f7beb5efc519e237 81 SUPERFAMILY SSF55174 9 71 1.96E-19 T 11-11-2016 RB2434 b4f92d2f3edfdbf7f7beb5efc519e237 81 Gene3D G3DSA:3.10.290.10 13 71 2.2E-25 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB2434 b4f92d2f3edfdbf7f7beb5efc519e237 81 SMART SM00363 15 70 4.8E-4 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB2434 b4f92d2f3edfdbf7f7beb5efc519e237 81 Pfam PF13275 S4 domain 14 71 6.3E-24 T 11-11-2016 RB12713 8b630251e183d479f25521d038ff76b0 355 Pfam PF01040 UbiA prenyltransferase family 57 298 6.6E-16 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RB2640 73ffc6e54248f186e9885ad2ce3a39d3 349 SUPERFAMILY SSF51658 34 274 3.59E-25 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB2640 73ffc6e54248f186e9885ad2ce3a39d3 349 Gene3D G3DSA:3.20.20.150 33 273 1.9E-30 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB2640 73ffc6e54248f186e9885ad2ce3a39d3 349 Pfam PF01261 Xylose isomerase-like TIM barrel 36 249 3.6E-24 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB655 b526d6bfa33ff6d7eb77100bbaed5388 346 PIRSF PIRSF012641 1 346 1.9E-81 T 11-11-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase RB655 b526d6bfa33ff6d7eb77100bbaed5388 346 Pfam PF10005 zinc-ribbon domain 6 89 7.5E-8 T 11-11-2016 IPR011201 Zinc-ribbon domain, bacteria RB655 b526d6bfa33ff6d7eb77100bbaed5388 346 Pfam PF15887 Putative zinc-binding metallo-peptidase 94 329 2.5E-79 T 11-11-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 Pfam PF00404 Dockerin type I repeat 1899 1919 2.6E-6 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 Pfam PF00404 Dockerin type I repeat 1857 1877 1.5E-5 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 SUPERFAMILY SSF63446 1855 1920 4.9E-6 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 Gene3D G3DSA:1.10.1330.10 1857 1920 4.2E-4 T 11-11-2016 IPR016134 Dockerin domain GO:0000272 RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 Pfam PF14717 Domain of unknown function (DUF4465) 284 461 2.1E-53 T 11-11-2016 IPR027828 Protein of unknown function DUF4465 RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 Pfam PF14717 Domain of unknown function (DUF4465) 939 1111 1.3E-50 T 11-11-2016 IPR027828 Protein of unknown function DUF4465 RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 Pfam PF14717 Domain of unknown function (DUF4465) 1263 1443 1.0E-49 T 11-11-2016 IPR027828 Protein of unknown function DUF4465 RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 Pfam PF07595 Planctomycete extracellular 6 28 3.8E-4 T 11-11-2016 IPR011506 Planctomycete extracellular RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 SUPERFAMILY SSF141072 569 667 2.49E-7 T 11-11-2016 RB6459 9eecfc35b3174c9a856bf20cba30602e 2028 SUPERFAMILY SSF141072 1142 1214 8.63E-7 T 11-11-2016 RB1391 779ba98114d4becb66cdb5d976e82d2d 538 Gene3D G3DSA:3.40.50.720 234 474 2.9E-26 T 11-11-2016 IPR016040 NAD(P)-binding domain RB1391 779ba98114d4becb66cdb5d976e82d2d 538 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 86 211 9.9E-8 T 11-11-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain RB1391 779ba98114d4becb66cdb5d976e82d2d 538 SUPERFAMILY SSF55961 80 217 1.07E-20 T 11-11-2016 RB1391 779ba98114d4becb66cdb5d976e82d2d 538 Pfam PF08338 Domain of unknown function (DUF1731) 478 524 3.4E-19 T 11-11-2016 IPR013549 Domain of unknown function DUF1731 RB1391 779ba98114d4becb66cdb5d976e82d2d 538 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 236 521 1.7E-99 T 11-11-2016 IPR010099 Epimerase family protein SDR39U1 RB1391 779ba98114d4becb66cdb5d976e82d2d 538 Pfam PF01370 NAD dependent epimerase/dehydratase family 236 442 2.1E-14 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RB1391 779ba98114d4becb66cdb5d976e82d2d 538 SUPERFAMILY SSF51735 225 526 2.39E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain RB309 b53e5add66b0060dac1d3ff4cc7b7bf9 482 SUPERFAMILY SSF52540 376 398 1.89E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB309 b53e5add66b0060dac1d3ff4cc7b7bf9 482 SUPERFAMILY SSF52540 49 338 1.89E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB309 b53e5add66b0060dac1d3ff4cc7b7bf9 482 Gene3D G3DSA:3.40.50.300 50 261 7.4E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10310 b36688da75e9b7f7cdf1fcff19ea1c33 485 Pfam PF00361 Proton-conducting membrane transporter 186 393 4.8E-23 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB4077 4f74aa86e8ef86ba792597e584b1c441 269 Pfam PF13559 Domain of unknown function (DUF4129) 188 248 2.2E-7 T 11-11-2016 IPR025403 Domain of unknown function DUF4129 RB9895 b5bed6f911647d38c0c45bddf9274f67 923 Pfam PF07196 Flagellin hook IN motif 396 446 3.5E-8 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 RB9895 b5bed6f911647d38c0c45bddf9274f67 923 Pfam PF07196 Flagellin hook IN motif 517 566 1.6E-6 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 RB5927 ac30f1f64c2ce4085ba7238888e15a2f 445 SUPERFAMILY SSF53649 315 421 1.05E-21 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5927 ac30f1f64c2ce4085ba7238888e15a2f 445 SUPERFAMILY SSF53649 137 279 1.05E-21 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5927 ac30f1f64c2ce4085ba7238888e15a2f 445 Gene3D G3DSA:3.40.720.10 318 422 1.2E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5927 ac30f1f64c2ce4085ba7238888e15a2f 445 Pfam PF07394 Protein of unknown function (DUF1501) 60 444 4.8E-113 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB681 edb9be422e470b454bd35b90656858a5 430 SMART SM01007 231 404 3.2E-33 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB681 edb9be422e470b454bd35b90656858a5 430 SMART SM01007 12 188 4.8E-51 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB681 edb9be422e470b454bd35b90656858a5 430 SUPERFAMILY SSF53639 5 211 7.65E-57 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB681 edb9be422e470b454bd35b90656858a5 430 SUPERFAMILY SSF53639 225 428 6.28E-42 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB681 edb9be422e470b454bd35b90656858a5 430 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 232 402 2.7E-25 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB681 edb9be422e470b454bd35b90656858a5 430 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 186 5.3E-44 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB681 edb9be422e470b454bd35b90656858a5 430 Gene3D G3DSA:3.40.225.10 7 210 1.6E-56 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB681 edb9be422e470b454bd35b90656858a5 430 Gene3D G3DSA:3.40.225.10 225 429 2.2E-47 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal RB10266 4326fa07d116d16b1cd7134f65aeee44 520 SUPERFAMILY SSF55347 181 207 9.81E-10 T 11-11-2016 RB10266 4326fa07d116d16b1cd7134f65aeee44 520 SUPERFAMILY SSF55347 247 385 9.81E-10 T 11-11-2016 RB10266 4326fa07d116d16b1cd7134f65aeee44 520 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 50 172 2.9E-14 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB10266 4326fa07d116d16b1cd7134f65aeee44 520 Gene3D G3DSA:3.30.360.10 189 438 6.2E-16 T 11-11-2016 RB10266 4326fa07d116d16b1cd7134f65aeee44 520 SUPERFAMILY SSF51735 41 202 6.11E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain RB10266 4326fa07d116d16b1cd7134f65aeee44 520 Gene3D G3DSA:3.40.50.720 42 188 6.4E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4567 f399a0318c22a5467d2445534a868a4c 274 Pfam PF13419 Haloacid dehalogenase-like hydrolase 122 241 1.2E-17 T 11-11-2016 IPR023214 HAD-like domain RB4567 f399a0318c22a5467d2445534a868a4c 274 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 52 246 1.1E-57 T 11-11-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 RB4567 f399a0318c22a5467d2445534a868a4c 274 SUPERFAMILY SSF56784 51 265 7.73E-49 T 11-11-2016 IPR023214 HAD-like domain RB4567 f399a0318c22a5467d2445534a868a4c 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 185 201 6.4E-18 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB4567 f399a0318c22a5467d2445534a868a4c 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 167 6.4E-18 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB4567 f399a0318c22a5467d2445534a868a4c 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 230 243 6.4E-18 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB4567 f399a0318c22a5467d2445534a868a4c 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 51 62 6.4E-18 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB4567 f399a0318c22a5467d2445534a868a4c 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 203 223 6.4E-18 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB4567 f399a0318c22a5467d2445534a868a4c 274 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 90 103 6.4E-18 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB4567 f399a0318c22a5467d2445534a868a4c 274 Gene3D G3DSA:1.10.150.240 80 130 3.9E-6 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RB4567 f399a0318c22a5467d2445534a868a4c 274 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 53 233 3.4E-20 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB4567 f399a0318c22a5467d2445534a868a4c 274 Gene3D G3DSA:3.40.50.1000 131 268 3.3E-35 T 11-11-2016 IPR023214 HAD-like domain RB4567 f399a0318c22a5467d2445534a868a4c 274 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 140 240 1.0E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RB2001 11bbab77436e7ffc64b7a7df7b17cc28 470 SUPERFAMILY SSF53756 75 466 1.47E-57 T 11-11-2016 RB2001 11bbab77436e7ffc64b7a7df7b17cc28 470 Gene3D G3DSA:3.40.50.2000 260 437 2.8E-20 T 11-11-2016 RB2001 11bbab77436e7ffc64b7a7df7b17cc28 470 Pfam PF13439 Glycosyltransferase Family 4 86 262 6.8E-17 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB2001 11bbab77436e7ffc64b7a7df7b17cc28 470 Pfam PF13692 Glycosyl transferases group 1 282 431 1.2E-20 T 11-11-2016 RB8604 28b34ef1100c36cc528858d227711844 1227 Pfam PF05140 ResB-like family 424 533 1.1E-10 T 11-11-2016 IPR007816 ResB-like domain RB8604 28b34ef1100c36cc528858d227711844 1227 Pfam PF01578 Cytochrome C assembly protein 985 1188 8.9E-21 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RB11878 d39ee32608891649cbfe3bda3a23d73e 168 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 157 34.045 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB11878 d39ee32608891649cbfe3bda3a23d73e 168 SUPERFAMILY SSF55068 2 159 2.09E-65 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB11878 d39ee32608891649cbfe3bda3a23d73e 168 Pfam PF01625 Peptide methionine sulfoxide reductase 5 151 6.3E-58 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB11878 d39ee32608891649cbfe3bda3a23d73e 168 Gene3D G3DSA:3.30.1060.10 2 152 1.6E-65 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB11878 d39ee32608891649cbfe3bda3a23d73e 168 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 151 1.3E-51 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB2055 11c4dacf2e4a305fe67ed36c819c4cae 402 Pfam PF00092 von Willebrand factor type A domain 258 390 1.3E-18 T 11-11-2016 IPR002035 von Willebrand factor, type A RB2055 11c4dacf2e4a305fe67ed36c819c4cae 402 SMART SM00327 189 397 3.0E-16 T 11-11-2016 IPR002035 von Willebrand factor, type A RB2055 11c4dacf2e4a305fe67ed36c819c4cae 402 Gene3D G3DSA:3.40.50.410 188 395 2.8E-27 T 11-11-2016 IPR002035 von Willebrand factor, type A RB2055 11c4dacf2e4a305fe67ed36c819c4cae 402 SUPERFAMILY SSF53300 231 396 2.37E-34 T 11-11-2016 IPR002035 von Willebrand factor, type A RB2055 11c4dacf2e4a305fe67ed36c819c4cae 402 SUPERFAMILY SSF53300 160 202 2.37E-34 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4586 3030732293ea9533890a988fa2ca54ce 172 Pfam PF08534 Redoxin 23 164 3.9E-29 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RB4586 3030732293ea9533890a988fa2ca54ce 172 ProSitePatterns PS01265 Tpx family signature. 89 100 - T 11-11-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RB4586 3030732293ea9533890a988fa2ca54ce 172 Gene3D G3DSA:3.40.30.10 7 170 3.8E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4586 3030732293ea9533890a988fa2ca54ce 172 SUPERFAMILY SSF52833 7 165 1.22E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4429 d7b1721d2f78342689e3aa3bb0485ac5 89 Pfam PF11160 Protein of unknown function (DUF2945) 26 77 2.7E-7 T 11-11-2016 IPR021331 Protein of unknown function DUF2945 RB9201 71bb48ac506420fbcdb4fee8f571a994 2046 Gene3D G3DSA:2.60.40.1120 521 582 1.3E-5 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB9201 71bb48ac506420fbcdb4fee8f571a994 2046 SUPERFAMILY SSF48239 1500 1533 1.57E-19 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9201 71bb48ac506420fbcdb4fee8f571a994 2046 SUPERFAMILY SSF48239 1591 1827 1.57E-19 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9201 71bb48ac506420fbcdb4fee8f571a994 2046 SMART SM01360 1285 1375 1.9E-24 T 11-11-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RB9201 71bb48ac506420fbcdb4fee8f571a994 2046 Gene3D G3DSA:1.50.10.20 1594 1826 4.2E-19 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9201 71bb48ac506420fbcdb4fee8f571a994 2046 Gene3D G3DSA:1.50.10.20 1499 1542 4.2E-19 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9201 71bb48ac506420fbcdb4fee8f571a994 2046 Pfam PF00207 Alpha-2-macroglobulin family 1285 1374 5.7E-18 T 11-11-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RB9201 71bb48ac506420fbcdb4fee8f571a994 2046 Pfam PF01835 MG2 domain 620 714 1.3E-16 T 11-11-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 RB9190 07e977ab2122b84df4542e7162c446c4 132 SUPERFAMILY SSF54292 15 104 4.71E-18 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RB9190 07e977ab2122b84df4542e7162c446c4 132 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 23 93 5.7E-10 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RB9190 07e977ab2122b84df4542e7162c446c4 132 Gene3D G3DSA:3.10.20.30 23 104 1.5E-16 T 11-11-2016 IPR012675 Beta-grasp domain RB1516 f04eac2f17f7cd8143a3226c3a784405 295 Pfam PF01882 Protein of unknown function DUF58 42 126 5.8E-15 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB1516 f04eac2f17f7cd8143a3226c3a784405 295 SUPERFAMILY SSF53300 77 256 3.24E-19 T 11-11-2016 IPR002035 von Willebrand factor, type A RB4642 9e687d328ea1166b581716fcf0c2804b 85 Pfam PF09720 Putative addiction module component 23 74 4.8E-14 T 11-11-2016 IPR013406 Conserved hypothetical protein CHP02574, addiction module RB4642 9e687d328ea1166b581716fcf0c2804b 85 TIGRFAM TIGR02574 stabl_TIGR02574: putative addiction module component, TIGR02574 family 19 81 1.4E-26 T 11-11-2016 IPR013406 Conserved hypothetical protein CHP02574, addiction module RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 Pfam PF00694 Aconitase C-terminal domain 700 827 9.0E-46 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 Gene3D G3DSA:3.30.499.10 21 249 1.3E-81 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 SUPERFAMILY SSF52016 638 898 7.85E-83 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 Pfam PF00330 Aconitase family (aconitate hydratase) 69 569 3.1E-185 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 Gene3D G3DSA:3.40.1060.10 250 368 9.8E-36 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 203 216 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 279 292 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 373 387 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 217 232 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 293 306 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 500 513 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 170 178 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 438 449 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 PRINTS PR00415 Aconitase family signature 146 159 7.1E-44 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 ProSitePatterns PS01244 Aconitase family signature 2. 500 513 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 ProSitePatterns PS00450 Aconitase family signature 1. 434 450 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 Gene3D G3DSA:3.20.19.10 644 899 2.1E-75 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 SUPERFAMILY SSF53732 5 633 1.44E-224 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 899 0.0 T 11-11-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 Gene3D G3DSA:3.30.499.10 369 394 7.4E-65 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RB2114 71e9c1e1c02cc94b7914bb9be0940ff4 901 Gene3D G3DSA:3.30.499.10 426 582 7.4E-65 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RB10716 6a96a35ffd056fab83668bb42bae34c7 456 Pfam PF13570 PQQ-like domain 70 95 0.0019 T 11-11-2016 IPR025666 Pyrrolo-quinoline quinone-like domain RB10716 6a96a35ffd056fab83668bb42bae34c7 456 Pfam PF13360 PQQ-like domain 104 362 4.5E-25 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB10716 6a96a35ffd056fab83668bb42bae34c7 456 Gene3D G3DSA:2.140.10.10 427 445 6.4E-56 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB10716 6a96a35ffd056fab83668bb42bae34c7 456 Gene3D G3DSA:2.140.10.10 25 366 6.4E-56 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB10716 6a96a35ffd056fab83668bb42bae34c7 456 SMART SM00564 332 364 700.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10716 6a96a35ffd056fab83668bb42bae34c7 456 SMART SM00564 236 268 210.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10716 6a96a35ffd056fab83668bb42bae34c7 456 SMART SM00564 83 120 270.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10716 6a96a35ffd056fab83668bb42bae34c7 456 SMART SM00564 181 225 98.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10716 6a96a35ffd056fab83668bb42bae34c7 456 SMART SM00564 136 168 11.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB10716 6a96a35ffd056fab83668bb42bae34c7 456 SUPERFAMILY SSF50998 37 370 2.09E-59 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB7868 90b9e2e6f9fea5dff0ab85144e2ae252 233 Pfam PF00578 AhpC/TSA family 56 178 8.1E-22 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB7868 90b9e2e6f9fea5dff0ab85144e2ae252 233 Gene3D G3DSA:3.40.30.10 29 208 1.2E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold RB7868 90b9e2e6f9fea5dff0ab85144e2ae252 233 SUPERFAMILY SSF52833 52 225 4.33E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold RB13078 59c8d2ecf1aae067313cb03191a0e07f 151 Pfam PF02643 Uncharacterized ACR, COG1430 46 127 4.1E-18 T 11-11-2016 IPR003795 Protein of unknown function DUF192 RB4286 677592aaae65b2c7c501c584f08a4541 241 Pfam PF01738 Dienelactone hydrolase family 24 240 1.0E-17 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 RB4286 677592aaae65b2c7c501c584f08a4541 241 SUPERFAMILY SSF53474 16 241 1.07E-24 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4286 677592aaae65b2c7c501c584f08a4541 241 Gene3D G3DSA:3.40.50.1820 27 241 1.9E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB950 11cc5fcb5e8013516e94a6e9dd56f591 442 PIRSF PIRSF006060 1 435 2.4E-61 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RB950 11cc5fcb5e8013516e94a6e9dd56f591 442 Pfam PF13520 Amino acid permease 21 410 1.4E-39 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RB3916 6639efb9e4c52c094422863128912c77 590 Pfam PF01566 Natural resistance-associated macrophage protein 73 520 4.6E-21 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RB4859 89af8e17e7c6ecbbfa44a484312439d4 186 Gene3D G3DSA:1.10.1740.10 18 113 5.0E-15 T 11-11-2016 RB4859 89af8e17e7c6ecbbfa44a484312439d4 186 SUPERFAMILY SSF88946 18 105 5.89E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4859 89af8e17e7c6ecbbfa44a484312439d4 186 Pfam PF04542 Sigma-70 region 2 24 90 4.2E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4859 89af8e17e7c6ecbbfa44a484312439d4 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 174 7.4E-17 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4859 89af8e17e7c6ecbbfa44a484312439d4 186 TIGRFAM TIGR02989 Sig-70_gvs1: RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family 20 177 6.5E-53 T 11-11-2016 IPR014331 RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 SMART SM00387 511 622 5.1E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 SUPERFAMILY SSF55874 462 620 1.1E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 620 9.9E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 Gene3D G3DSA:1.10.287.130 397 458 2.8E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 SMART SM00388 405 473 2.2E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 SUPERFAMILY SSF47384 388 470 6.67E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 7.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 564 7.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 7.3E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 Pfam PF00512 His Kinase A (phospho-acceptor) domain 407 470 2.5E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB2549 08e5cd103fce63152bbdd974b33bc3bb 643 Gene3D G3DSA:3.30.565.10 459 621 1.4E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB3517 2e2e7f6d95ef45b5529dd9ee06cbb22f 461 SUPERFAMILY SSF143597 359 448 6.8E-5 T 11-11-2016 RB9090 1b045dbf295623c44b9245475bceb47b 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 263 2.1E-101 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RB9090 1b045dbf295623c44b9245475bceb47b 269 Gene3D G3DSA:3.20.20.60 9 268 1.5E-102 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB9090 1b045dbf295623c44b9245475bceb47b 269 PIRSF PIRSF000388 1 269 1.8E-109 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RB9090 1b045dbf295623c44b9245475bceb47b 269 SUPERFAMILY SSF51621 10 268 1.61E-95 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RB9090 1b045dbf295623c44b9245475bceb47b 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 11 268 1.3E-84 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RB9090 1b045dbf295623c44b9245475bceb47b 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 11 268 40.54 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RB6841 c6ac9f1dbc855239303fbe3c9542050e 265 Gene3D G3DSA:3.90.550.10 15 259 3.7E-62 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6841 c6ac9f1dbc855239303fbe3c9542050e 265 SUPERFAMILY SSF53448 19 260 1.59E-54 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6841 c6ac9f1dbc855239303fbe3c9542050e 265 Pfam PF12804 MobA-like NTP transferase domain 22 190 7.5E-19 T 11-11-2016 IPR025877 MobA-like NTP transferase RB9338 b720a2907da72fc92df3b9e288a481bb 182 SUPERFAMILY SSF54211 4 175 1.67E-54 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB9338 b720a2907da72fc92df3b9e288a481bb 182 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 8 172 1.4E-35 T 11-11-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861 RB9338 b720a2907da72fc92df3b9e288a481bb 182 Gene3D G3DSA:3.30.230.60 4 176 3.8E-61 T 11-11-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861 RB9338 b720a2907da72fc92df3b9e288a481bb 182 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 9 173 1.5E-59 T 11-11-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861 RB10061 24fd4d8a3c3a6f5c72afa84926cbf2a5 368 Gene3D G3DSA:3.40.50.300 4 195 2.1E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10061 24fd4d8a3c3a6f5c72afa84926cbf2a5 368 SUPERFAMILY SSF52540 4 212 2.2E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10061 24fd4d8a3c3a6f5c72afa84926cbf2a5 368 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 191 5.2E-24 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RB3794 35d17d5dbff0431ef7afa793d356b90d 1412 SUPERFAMILY SSF52540 823 1049 6.28E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3794 35d17d5dbff0431ef7afa793d356b90d 1412 Pfam PF01580 FtsK/SpoIIIE family 824 1003 2.1E-27 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RB3794 35d17d5dbff0431ef7afa793d356b90d 1412 Gene3D G3DSA:3.40.50.300 824 1040 2.7E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB574 c71169e5a8ed2484db172c6e7594df51 1386 Gene3D G3DSA:1.25.40.10 1168 1355 8.2E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB574 c71169e5a8ed2484db172c6e7594df51 1386 Gene3D G3DSA:1.25.40.10 688 889 8.5E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB574 c71169e5a8ed2484db172c6e7594df51 1386 SUPERFAMILY SSF54001 319 402 8.55E-9 T 11-11-2016 RB574 c71169e5a8ed2484db172c6e7594df51 1386 SUPERFAMILY SSF48452 688 873 2.0E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB574 c71169e5a8ed2484db172c6e7594df51 1386 Pfam PF01841 Transglutaminase-like superfamily 320 381 1.0E-5 T 11-11-2016 IPR002931 Transglutaminase-like RB574 c71169e5a8ed2484db172c6e7594df51 1386 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 79 244 2.7E-24 T 11-11-2016 IPR024618 Domain of unknown function DUF3857 RB1835 bec465406826a0014d9fdc5e62da5ca6 208 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 5 205 6.1E-96 T 11-11-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 RB1835 bec465406826a0014d9fdc5e62da5ca6 208 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 194 6.4E-60 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 RB1835 bec465406826a0014d9fdc5e62da5ca6 208 PIRSF PIRSF006102 3 208 6.1E-66 T 11-11-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 RB1835 bec465406826a0014d9fdc5e62da5ca6 208 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 206 35.247 T 11-11-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 RB10887 22fb59d07281fec7df1a15eee8a048e5 609 Pfam PF16861 Carbamoyltransferase C-terminus 400 586 3.6E-73 T 11-11-2016 IPR031730 Carbamoyltransferase, C-terminal RB10887 22fb59d07281fec7df1a15eee8a048e5 609 Pfam PF02543 Carbamoyltransferase N-terminus 4 341 7.1E-94 T 11-11-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 RB10887 22fb59d07281fec7df1a15eee8a048e5 609 SUPERFAMILY SSF53067 125 210 2.43E-18 T 11-11-2016 RB10887 22fb59d07281fec7df1a15eee8a048e5 609 SUPERFAMILY SSF53067 3 79 2.43E-18 T 11-11-2016 RB10887 22fb59d07281fec7df1a15eee8a048e5 609 SUPERFAMILY SSF53067 260 347 2.43E-18 T 11-11-2016 RB1628 09c925750a91a068a75dea246019ca10 170 Pfam PF04367 Protein of unknown function (DUF502) 22 121 4.3E-7 T 11-11-2016 IPR007462 Protein of unknown function DUF502 RB8651 6fc05b3e48a784d1ddc84e54e071f027 493 Pfam PF01882 Protein of unknown function DUF58 235 319 4.9E-20 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB6100 846283d10f51fd3baa46c3be724629ec 940 Pfam PF07587 Protein of unknown function (DUF1553) 590 912 7.4E-45 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB6100 846283d10f51fd3baa46c3be724629ec 940 Gene3D G3DSA:2.60.40.1080 176 245 5.0E-4 T 11-11-2016 RB6100 846283d10f51fd3baa46c3be724629ec 940 Pfam PF07583 Protein of unknown function (DUF1549) 276 491 8.0E-50 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB11485 d1717e00f83620222afb69ccae80cf26 222 SUPERFAMILY SSF54909 114 202 7.24E-16 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB11485 d1717e00f83620222afb69ccae80cf26 222 Pfam PF03795 YCII-related domain 127 201 2.6E-9 T 11-11-2016 IPR005545 YCII-related RB11485 d1717e00f83620222afb69ccae80cf26 222 Gene3D G3DSA:3.30.70.1060 116 201 1.3E-9 T 11-11-2016 RB11008 754a1365192389ab19425c23f7737c11 394 SUPERFAMILY SSF48239 58 393 1.53E-40 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11008 754a1365192389ab19425c23f7737c11 394 Gene3D G3DSA:1.50.10.20 60 393 1.1E-34 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB7859 dfee765547c4ff460e47e53a9da3856f 177 ProSitePatterns PS00585 Ribosomal protein S5 signature. 38 70 - T 11-11-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site RB7859 dfee765547c4ff460e47e53a9da3856f 177 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 173 33.374 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RB7859 dfee765547c4ff460e47e53a9da3856f 177 SUPERFAMILY SSF54211 89 168 5.06E-26 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB7859 dfee765547c4ff460e47e53a9da3856f 177 Gene3D G3DSA:3.30.230.10 87 168 1.1E-30 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB7859 dfee765547c4ff460e47e53a9da3856f 177 Pfam PF03719 Ribosomal protein S5, C-terminal domain 97 167 2.1E-30 T 11-11-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RB7859 dfee765547c4ff460e47e53a9da3856f 177 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 21 170 8.8E-61 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RB7859 dfee765547c4ff460e47e53a9da3856f 177 Pfam PF00333 Ribosomal protein S5, N-terminal domain 22 85 2.8E-25 T 11-11-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RB7859 dfee765547c4ff460e47e53a9da3856f 177 Gene3D G3DSA:3.30.160.20 19 83 1.1E-25 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain RB7859 dfee765547c4ff460e47e53a9da3856f 177 SUPERFAMILY SSF54768 19 86 6.7E-20 T 11-11-2016 RB8901 3249514d07272c6f272eb15f31578884 530 Pfam PF13036 Peptidoglycan-synthase activator LpoB 226 306 4.7E-5 T 11-11-2016 IPR014094 Penicillin-binding protein activator LpoB RB7201 80c9650b060995eb514bd72523fc5c1b 494 SUPERFAMILY SSF46600 329 377 7.19E-5 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB7201 80c9650b060995eb514bd72523fc5c1b 494 SUPERFAMILY SSF82771 143 221 5.23E-12 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily RB7201 80c9650b060995eb514bd72523fc5c1b 494 Gene3D G3DSA:4.10.860.10 322 375 1.5E-6 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB7201 80c9650b060995eb514bd72523fc5c1b 494 Pfam PF01541 GIY-YIG catalytic domain 145 214 9.7E-6 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily RB7201 80c9650b060995eb514bd72523fc5c1b 494 SMART SM00465 143 224 7.4E-7 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily RB7201 80c9650b060995eb514bd72523fc5c1b 494 Pfam PF02151 UvrB/uvrC motif 347 376 3.4E-7 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB9096 e53b4328970a3e4150b9ff29d4d69cc2 1122 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 898 1017 7.9E-7 T 11-11-2016 IPR002618 UDPGP family GO:0008152|GO:0070569 RB9096 e53b4328970a3e4150b9ff29d4d69cc2 1122 SUPERFAMILY SSF53448 732 829 1.8E-15 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9096 e53b4328970a3e4150b9ff29d4d69cc2 1122 SUPERFAMILY SSF53448 863 1036 1.8E-15 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9096 e53b4328970a3e4150b9ff29d4d69cc2 1122 SUPERFAMILY SSF53448 1063 1112 1.8E-15 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9096 e53b4328970a3e4150b9ff29d4d69cc2 1122 Gene3D G3DSA:3.90.550.10 900 1091 2.9E-19 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9096 e53b4328970a3e4150b9ff29d4d69cc2 1122 Gene3D G3DSA:3.90.550.10 720 863 2.9E-19 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB8126 882ed02367af36e2171f19007ccd1c5f 285 Pfam PF01063 Amino-transferase class IV 31 256 1.7E-61 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RB8126 882ed02367af36e2171f19007ccd1c5f 285 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 6 283 6.8E-95 T 11-11-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108 RB8126 882ed02367af36e2171f19007ccd1c5f 285 ProSitePatterns PS00770 Aminotransferases class-IV signature. 184 213 - T 11-11-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 RB8126 882ed02367af36e2171f19007ccd1c5f 285 Gene3D G3DSA:3.20.10.10 123 283 1.7E-55 T 11-11-2016 RB8126 882ed02367af36e2171f19007ccd1c5f 285 SUPERFAMILY SSF56752 3 282 1.57E-95 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RB8126 882ed02367af36e2171f19007ccd1c5f 285 Gene3D G3DSA:3.30.470.10 5 116 2.8E-41 T 11-11-2016 RB10789 aa9e39c8d312843e83907485bd837e9e 197 Gene3D G3DSA:3.40.30.10 11 175 5.8E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold RB10789 aa9e39c8d312843e83907485bd837e9e 197 SUPERFAMILY SSF52833 6 192 1.16E-54 T 11-11-2016 IPR012336 Thioredoxin-like fold RB10789 aa9e39c8d312843e83907485bd837e9e 197 Pfam PF08534 Redoxin 12 148 6.3E-26 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RB1168 f4b7784834e182b8e18375afed576836 742 SUPERFAMILY SSF48452 568 673 7.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1168 f4b7784834e182b8e18375afed576836 742 Pfam PF13174 Tetratricopeptide repeat 686 717 0.0059 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1168 f4b7784834e182b8e18375afed576836 742 Pfam PF13174 Tetratricopeptide repeat 337 368 0.0028 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB1168 f4b7784834e182b8e18375afed576836 742 Pfam PF13432 Tetratricopeptide repeat 614 673 4.4E-5 T 11-11-2016 RB1168 f4b7784834e182b8e18375afed576836 742 SUPERFAMILY SSF48452 258 368 5.06E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1168 f4b7784834e182b8e18375afed576836 742 SUPERFAMILY SSF48452 647 712 5.06E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1168 f4b7784834e182b8e18375afed576836 742 Gene3D G3DSA:1.25.40.10 543 712 1.6E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1168 f4b7784834e182b8e18375afed576836 742 Gene3D G3DSA:1.25.40.10 154 374 1.7E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2085 096643f74a7f0bdd43356a80c8990070 488 Gene3D G3DSA:3.40.720.10 33 400 3.3E-96 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2085 096643f74a7f0bdd43356a80c8990070 488 SUPERFAMILY SSF53649 34 483 5.89E-107 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2085 096643f74a7f0bdd43356a80c8990070 488 Gene3D G3DSA:3.30.1120.10 426 480 1.3E-4 T 11-11-2016 RB2085 096643f74a7f0bdd43356a80c8990070 488 Pfam PF00884 Sulfatase 36 381 5.5E-52 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB11855 4ddc19cd190330377b216fbc520c121e 101 Pfam PF07628 Protein of unknown function (DUF1589) 1 63 1.6E-12 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB10909 2c95f6c022bb06b1b7b8828f1b95b0a4 267 SUPERFAMILY SSF53067 151 253 3.06E-11 T 11-11-2016 RB10909 2c95f6c022bb06b1b7b8828f1b95b0a4 267 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 16 255 8.7E-53 T 11-11-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 RB10909 2c95f6c022bb06b1b7b8828f1b95b0a4 267 Pfam PF00814 Glycoprotease family 86 133 2.4E-13 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RB10909 2c95f6c022bb06b1b7b8828f1b95b0a4 267 Gene3D G3DSA:3.30.420.40 16 170 1.6E-17 T 11-11-2016 RB10909 2c95f6c022bb06b1b7b8828f1b95b0a4 267 SUPERFAMILY SSF53067 17 132 3.37E-13 T 11-11-2016 RB1433 21c40d5b3728e4697bcda8af371cc4b8 145 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 6 132 3.1E-30 T 11-11-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RB2091 d75d56edc1f7cd5528b0c048f78826e0 267 Pfam PF01522 Polysaccharide deacetylase 40 154 1.6E-16 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB2091 d75d56edc1f7cd5528b0c048f78826e0 267 SUPERFAMILY SSF88713 190 266 1.22E-28 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RB2091 d75d56edc1f7cd5528b0c048f78826e0 267 SUPERFAMILY SSF88713 5 160 1.22E-28 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RB2091 d75d56edc1f7cd5528b0c048f78826e0 267 Gene3D G3DSA:3.20.20.370 4 160 3.0E-26 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB2091 d75d56edc1f7cd5528b0c048f78826e0 267 Gene3D G3DSA:3.20.20.370 192 266 3.0E-26 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB1138 5bb3a315c80742c7f9470f7d33ce6b2a 155 Pfam PF12802 MarR family 74 121 1.2E-7 T 11-11-2016 RB1138 5bb3a315c80742c7f9470f7d33ce6b2a 155 SUPERFAMILY SSF46785 74 132 1.22E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1138 5bb3a315c80742c7f9470f7d33ce6b2a 155 Gene3D G3DSA:1.10.10.10 73 130 2.0E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB12840 ddf3473e3c1f3e3d8b1a88e368f6332c 174 Pfam PF00466 Ribosomal protein L10 2 95 9.2E-17 T 11-11-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RB12840 ddf3473e3c1f3e3d8b1a88e368f6332c 174 SUPERFAMILY SSF160369 3 169 1.05E-32 T 11-11-2016 RB7675 9fab805eac5cb7eafbba7d183b3ba63a 605 Pfam PF02386 Cation transport protein 96 487 4.2E-55 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 RB7675 9fab805eac5cb7eafbba7d183b3ba63a 605 Pfam PF02386 Cation transport protein 542 599 2.5E-7 T 11-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 RB10451 496082f7dba5d54f813d1e3096846206 386 SUPERFAMILY SSF55961 165 376 1.26E-25 T 11-11-2016 RB10451 496082f7dba5d54f813d1e3096846206 386 SUPERFAMILY SSF50022 6 145 4.45E-39 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB10451 496082f7dba5d54f813d1e3096846206 386 Pfam PF00355 Rieske [2Fe-2S] domain 35 121 1.5E-18 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB10451 496082f7dba5d54f813d1e3096846206 386 Gene3D G3DSA:2.102.10.10 34 138 4.9E-28 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB10451 496082f7dba5d54f813d1e3096846206 386 Gene3D G3DSA:3.90.380.10 139 376 2.1E-10 T 11-11-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RB10451 496082f7dba5d54f813d1e3096846206 386 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 169 370 4.4E-22 T 11-11-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RB6123 7534a622d9c4e476c1a0411a751d52b6 764 SUPERFAMILY SSF48452 330 367 3.25E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6123 7534a622d9c4e476c1a0411a751d52b6 764 SUPERFAMILY SSF48452 79 173 3.25E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6123 7534a622d9c4e476c1a0411a751d52b6 764 Gene3D G3DSA:1.25.40.10 79 189 1.2E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6123 7534a622d9c4e476c1a0411a751d52b6 764 Gene3D G3DSA:1.25.40.10 245 296 1.2E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6123 7534a622d9c4e476c1a0411a751d52b6 764 Gene3D G3DSA:1.25.40.10 678 706 1.2E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB7385 1598ed9aa6a4ba42c560e29f75f7512f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.3E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7385 1598ed9aa6a4ba42c560e29f75f7512f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7385 1598ed9aa6a4ba42c560e29f75f7512f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.3E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7385 1598ed9aa6a4ba42c560e29f75f7512f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.3E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7385 1598ed9aa6a4ba42c560e29f75f7512f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 4.3E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7385 1598ed9aa6a4ba42c560e29f75f7512f 261 Gene3D G3DSA:3.40.50.720 16 238 2.7E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7385 1598ed9aa6a4ba42c560e29f75f7512f 261 Pfam PF00106 short chain dehydrogenase 18 195 3.2E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB7385 1598ed9aa6a4ba42c560e29f75f7512f 261 SUPERFAMILY SSF51735 16 242 2.4E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2782 c9720ea817063ab531f94f4a599a6afd 589 Pfam PF13633 Prokaryotic N-terminal methylation site 186 211 5.2E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB2782 c9720ea817063ab531f94f4a599a6afd 589 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 186 207 1.1E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB2782 c9720ea817063ab531f94f4a599a6afd 589 Gene3D G3DSA:3.30.700.10 188 250 4.4E-7 T 11-11-2016 RB2782 c9720ea817063ab531f94f4a599a6afd 589 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 186 206 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB2782 c9720ea817063ab531f94f4a599a6afd 589 Pfam PF07596 Protein of unknown function (DUF1559) 213 560 1.1E-36 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB2782 c9720ea817063ab531f94f4a599a6afd 589 SUPERFAMILY SSF54523 188 267 1.02E-16 T 11-11-2016 RB4721 cdffed88e3961a97dee861226935d0f3 242 Pfam PF01936 NYN domain 10 144 1.4E-29 T 11-11-2016 IPR021139 NYN domain, limkain-b1-type RB4721 cdffed88e3961a97dee861226935d0f3 242 Gene3D G3DSA:3.40.50.1010 5 145 6.3E-25 T 11-11-2016 IPR029060 PIN domain-like RB4721 cdffed88e3961a97dee861226935d0f3 242 Pfam PF12872 OST-HTH/LOTUS domain 168 230 1.5E-13 T 11-11-2016 IPR025605 OST-HTH/LOTUS domain RB6438 49369a3f5e44f887ab68e0c417af9c53 485 Gene3D G3DSA:1.25.10.10 97 178 7.3E-4 T 11-11-2016 IPR011989 Armadillo-like helical RB4337 6bb3b21f4857a3101ef5e220078cc8d2 286 SUPERFAMILY SSF53448 1 120 2.33E-35 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB4337 6bb3b21f4857a3101ef5e220078cc8d2 286 SUPERFAMILY SSF53448 153 249 2.33E-35 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB4337 6bb3b21f4857a3101ef5e220078cc8d2 286 Pfam PF00535 Glycosyl transferase family 2 47 113 1.7E-8 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB4337 6bb3b21f4857a3101ef5e220078cc8d2 286 Pfam PF02709 N-terminal domain of galactosyltransferase 154 205 1.5E-7 T 11-11-2016 IPR027791 Galactosyltransferase, C-terminal RB4337 6bb3b21f4857a3101ef5e220078cc8d2 286 Gene3D G3DSA:3.90.550.10 1 241 1.0E-24 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB8085 6c19e1035299bd7e2936530a53f0315a 495 SUPERFAMILY SSF50998 102 444 1.2E-40 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB8085 6c19e1035299bd7e2936530a53f0315a 495 Gene3D G3DSA:2.140.10.10 94 490 8.0E-40 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB8085 6c19e1035299bd7e2936530a53f0315a 495 Gene3D G3DSA:2.140.10.10 40 57 8.0E-40 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB8085 6c19e1035299bd7e2936530a53f0315a 495 Pfam PF13360 PQQ-like domain 161 417 3.1E-24 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB12183 d9b2a0d306ca1c0ed646c9e5d0e8c9a3 585 Gene3D G3DSA:3.30.70.270 156 315 3.0E-44 T 11-11-2016 RB12183 d9b2a0d306ca1c0ed646c9e5d0e8c9a3 585 SMART SM00267 143 312 3.0E-42 T 11-11-2016 IPR000160 GGDEF domain RB12183 d9b2a0d306ca1c0ed646c9e5d0e8c9a3 585 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 309 9.0E-40 T 11-11-2016 IPR000160 GGDEF domain RB12183 d9b2a0d306ca1c0ed646c9e5d0e8c9a3 585 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 307 9.9E-36 T 11-11-2016 IPR000160 GGDEF domain RB12183 d9b2a0d306ca1c0ed646c9e5d0e8c9a3 585 SUPERFAMILY SSF55073 159 313 4.16E-37 T 11-11-2016 IPR029787 Nucleotide cyclase RB11847 05b9f529daf1d4a22bebe3fdf104b9fd 243 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 68 219 5.5E-62 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB11847 05b9f529daf1d4a22bebe3fdf104b9fd 243 Gene3D G3DSA:3.30.1060.10 59 219 2.6E-73 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB11847 05b9f529daf1d4a22bebe3fdf104b9fd 243 SUPERFAMILY SSF55068 63 229 8.37E-75 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB11847 05b9f529daf1d4a22bebe3fdf104b9fd 243 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 67 224 37.363 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB11847 05b9f529daf1d4a22bebe3fdf104b9fd 243 Pfam PF01625 Peptide methionine sulfoxide reductase 70 220 9.6E-65 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RB3750 35b2cd40f2800924b88b281560747983 163 Gene3D G3DSA:1.20.120.340 23 141 6.6E-23 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 RB3750 35b2cd40f2800924b88b281560747983 163 Pfam PF02561 Flagellar protein FliS 23 135 4.7E-20 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 RB3750 35b2cd40f2800924b88b281560747983 163 SUPERFAMILY SSF101116 33 135 6.93E-17 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 RB12301 20ac5522cf00ed399e40929ea4e94110 183 Pfam PF05239 PRC-barrel domain 52 122 2.3E-15 T 11-11-2016 IPR027275 PRC-barrel domain RB12301 20ac5522cf00ed399e40929ea4e94110 183 Gene3D G3DSA:2.30.30.240 53 112 9.3E-17 T 11-11-2016 RB12301 20ac5522cf00ed399e40929ea4e94110 183 SUPERFAMILY SSF50346 49 174 1.24E-15 T 11-11-2016 IPR011033 PRC-barrel-like RB4703 d9e80865014e26d1cba3a949ad88edac 690 Pfam PF12779 YXWGXW repeat (2 copies) 112 139 2.0E-5 T 11-11-2016 IPR024447 YXWGXW repeat RB4703 d9e80865014e26d1cba3a949ad88edac 690 Pfam PF12779 YXWGXW repeat (2 copies) 146 167 0.029 T 11-11-2016 IPR024447 YXWGXW repeat RB4703 d9e80865014e26d1cba3a949ad88edac 690 Pfam PF12779 YXWGXW repeat (2 copies) 199 219 0.0025 T 11-11-2016 IPR024447 YXWGXW repeat RB5319 71da1fdb5a5ca17176ff8a72d7b35481 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 114 3.3E-13 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB5319 71da1fdb5a5ca17176ff8a72d7b35481 230 Gene3D G3DSA:3.20.20.70 2 209 4.7E-48 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB5319 71da1fdb5a5ca17176ff8a72d7b35481 230 SMART SM00934 4 209 1.8E-16 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RB5319 71da1fdb5a5ca17176ff8a72d7b35481 230 SUPERFAMILY SSF51366 3 226 8.34E-31 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB10116 965a3d1da30ba5a4b00fb17632068c22 489 Gene3D G3DSA:3.40.720.10 44 385 6.2E-116 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB10116 965a3d1da30ba5a4b00fb17632068c22 489 SUPERFAMILY SSF53649 44 478 1.7E-136 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB10116 965a3d1da30ba5a4b00fb17632068c22 489 Pfam PF00884 Sulfatase 47 372 5.2E-77 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10116 965a3d1da30ba5a4b00fb17632068c22 489 ProSitePatterns PS00149 Sulfatases signature 2. 141 151 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB10116 965a3d1da30ba5a4b00fb17632068c22 489 Gene3D G3DSA:3.30.1120.10 386 474 2.6E-18 T 11-11-2016 RB10116 965a3d1da30ba5a4b00fb17632068c22 489 ProSitePatterns PS00523 Sulfatases signature 1. 93 105 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB3865 2fd98e97074213e2b3763281420c5922 178 Pfam PF13302 Acetyltransferase (GNAT) domain 38 155 1.7E-8 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB3865 2fd98e97074213e2b3763281420c5922 178 SUPERFAMILY SSF55729 20 162 5.04E-16 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB3865 2fd98e97074213e2b3763281420c5922 178 Gene3D G3DSA:3.40.630.30 31 158 2.7E-14 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB12097 312897c0927bb87e4e71c81dc4fbdcd8 948 Pfam PF07583 Protein of unknown function (DUF1549) 207 415 1.4E-81 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB12097 312897c0927bb87e4e71c81dc4fbdcd8 948 Pfam PF07587 Protein of unknown function (DUF1553) 615 867 8.9E-72 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB12097 312897c0927bb87e4e71c81dc4fbdcd8 948 Pfam PF07635 Planctomycete cytochrome C 61 123 1.6E-14 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB7455 0b13dfe209be22d56cbdb04ab9b4d153 838 Pfam PF07639 YTV 218 256 5.6E-9 T 11-11-2016 IPR011521 YTV RB7455 0b13dfe209be22d56cbdb04ab9b4d153 838 Pfam PF07639 YTV 302 340 5.1E-9 T 11-11-2016 IPR011521 YTV RB7455 0b13dfe209be22d56cbdb04ab9b4d153 838 Pfam PF07639 YTV 176 214 6.3E-7 T 11-11-2016 IPR011521 YTV RB7455 0b13dfe209be22d56cbdb04ab9b4d153 838 Pfam PF07639 YTV 344 382 3.4E-9 T 11-11-2016 IPR011521 YTV RB7455 0b13dfe209be22d56cbdb04ab9b4d153 838 Pfam PF07639 YTV 260 298 1.5E-9 T 11-11-2016 IPR011521 YTV RB9411 cdff1fa62b11e60c45a23b6b722cdac0 458 SUPERFAMILY SSF53098 58 433 9.86E-46 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB9411 cdff1fa62b11e60c45a23b6b722cdac0 458 Gene3D G3DSA:3.90.350.10 237 376 2.3E-4 T 11-11-2016 IPR014736 Transposase, Tn5-like, core RB9411 cdff1fa62b11e60c45a23b6b722cdac0 458 Pfam PF01609 Transposase DDE domain 167 402 2.1E-18 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB11118 a231fc20966944829d63e569130f093e 385 SUPERFAMILY SSF51604 171 379 1.44E-49 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB11118 a231fc20966944829d63e569130f093e 385 SUPERFAMILY SSF54826 48 163 2.41E-21 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB11118 a231fc20966944829d63e569130f093e 385 SMART SM00922 181 272 2.9E-18 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RB11118 a231fc20966944829d63e569130f093e 385 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 61 163 6.9E-11 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RB11118 a231fc20966944829d63e569130f093e 385 Pfam PF13378 Enolase C-terminal domain-like 190 381 3.5E-33 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB11118 a231fc20966944829d63e569130f093e 385 Gene3D G3DSA:3.30.390.10 48 163 3.1E-30 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB11118 a231fc20966944829d63e569130f093e 385 Gene3D G3DSA:3.20.20.120 172 370 6.0E-54 T 11-11-2016 IPR029065 Enolase C-terminal domain-like RB13170 bc097abaa4dbb5b21b38011c70a24491 388 Gene3D G3DSA:3.30.700.10 1 68 7.2E-6 T 11-11-2016 RB13170 bc097abaa4dbb5b21b38011c70a24491 388 SUPERFAMILY SSF54523 1 149 1.41E-25 T 11-11-2016 RB13170 bc097abaa4dbb5b21b38011c70a24491 388 Pfam PF07596 Protein of unknown function (DUF1559) 23 350 3.6E-62 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8082 1a0b956210186a2c8066b613031d337c 566 Gene3D G3DSA:1.25.40.80 194 212 1.2E-9 T 11-11-2016 RB8082 1a0b956210186a2c8066b613031d337c 566 Gene3D G3DSA:1.25.40.80 280 364 1.2E-9 T 11-11-2016 RB8082 1a0b956210186a2c8066b613031d337c 566 SUPERFAMILY SSF48173 279 533 7.72E-53 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RB8082 1a0b956210186a2c8066b613031d337c 566 Gene3D G3DSA:1.10.579.10 365 457 1.4E-6 T 11-11-2016 RB8082 1a0b956210186a2c8066b613031d337c 566 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 52 279 4.6E-79 T 11-11-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein RB12816 cff0fcecbbcdcf781d3a0c9a46cfb49f 257 Pfam PF07722 Peptidase C26 5 218 3.2E-64 T 11-11-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 RB12816 cff0fcecbbcdcf781d3a0c9a46cfb49f 257 Gene3D G3DSA:3.40.50.880 3 247 1.0E-45 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB12816 cff0fcecbbcdcf781d3a0c9a46cfb49f 257 SUPERFAMILY SSF52317 24 242 7.08E-37 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB6242 5a2c6dd371ecfea01cc12de5929a9665 447 Pfam PF04932 O-Antigen ligase 215 351 5.5E-11 T 11-11-2016 IPR007016 O-antigen ligase-related RB6327 ec95234cc63a8c09d04119ad84c19b90 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 5.7E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6327 ec95234cc63a8c09d04119ad84c19b90 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 5.7E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6327 ec95234cc63a8c09d04119ad84c19b90 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.7E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6327 ec95234cc63a8c09d04119ad84c19b90 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 5.7E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6327 ec95234cc63a8c09d04119ad84c19b90 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 5.7E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6327 ec95234cc63a8c09d04119ad84c19b90 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 5.7E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6327 ec95234cc63a8c09d04119ad84c19b90 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 0.0087 T 11-11-2016 RB6327 ec95234cc63a8c09d04119ad84c19b90 247 SUPERFAMILY SSF51735 6 240 1.16E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6327 ec95234cc63a8c09d04119ad84c19b90 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 240 8.9E-57 T 11-11-2016 RB6327 ec95234cc63a8c09d04119ad84c19b90 247 Gene3D G3DSA:3.40.50.720 5 240 6.2E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6442 736ee052e8510edd1e67ee6cdadb2363 434 PIRSF PIRSF001434 29 434 1.6E-141 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB6442 736ee052e8510edd1e67ee6cdadb2363 434 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 241 255 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB6442 736ee052e8510edd1e67ee6cdadb2363 434 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 45 431 3.3E-126 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB6442 736ee052e8510edd1e67ee6cdadb2363 434 SUPERFAMILY SSF53383 68 432 2.58E-108 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB6442 736ee052e8510edd1e67ee6cdadb2363 434 Gene3D G3DSA:3.90.1150.10 298 433 1.6E-49 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB6442 736ee052e8510edd1e67ee6cdadb2363 434 Gene3D G3DSA:3.40.640.10 43 297 4.8E-81 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB8628 813ef6ee0f27533a2843de9edd079ecd 101 Pfam PF05685 Putative restriction endonuclease 40 98 3.7E-5 T 11-11-2016 IPR008538 Domain of unknown function DUF820 RB8628 813ef6ee0f27533a2843de9edd079ecd 101 Gene3D G3DSA:3.90.1570.10 41 99 1.2E-5 T 11-11-2016 IPR012296 Nuclease, putative, TT1808 RB1308 c32a96dfff7ee2db7be0469cb83e073a 504 Pfam PF01593 Flavin containing amine oxidoreductase 44 424 7.6E-16 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB1308 c32a96dfff7ee2db7be0469cb83e073a 504 Gene3D G3DSA:3.50.50.60 33 113 1.3E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1308 c32a96dfff7ee2db7be0469cb83e073a 504 Gene3D G3DSA:3.50.50.60 201 308 1.3E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1308 c32a96dfff7ee2db7be0469cb83e073a 504 SUPERFAMILY SSF51905 33 295 1.35E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB437 09f109d286ce55c7a5202b4962020cf3 415 Pfam PF00589 Phage integrase family 206 401 5.6E-9 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB437 09f109d286ce55c7a5202b4962020cf3 415 SUPERFAMILY SSF56349 319 405 5.49E-27 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB437 09f109d286ce55c7a5202b4962020cf3 415 SUPERFAMILY SSF56349 85 277 5.49E-27 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB437 09f109d286ce55c7a5202b4962020cf3 415 Gene3D G3DSA:1.10.443.10 194 401 1.8E-21 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB8895 49b1f4309d60851c9b15dfd4887b198f 418 Gene3D G3DSA:2.120.10.10 64 416 8.7E-90 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB8895 49b1f4309d60851c9b15dfd4887b198f 418 SUPERFAMILY SSF50939 60 416 4.21E-91 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB8895 49b1f4309d60851c9b15dfd4887b198f 418 Pfam PF13088 BNR repeat-like domain 99 397 9.9E-33 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB4593 48937ec0681a5e8349b38208cd06aa00 404 Pfam PF13174 Tetratricopeptide repeat 115 147 0.0034 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB4593 48937ec0681a5e8349b38208cd06aa00 404 Pfam PF13174 Tetratricopeptide repeat 222 245 0.15 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB4593 48937ec0681a5e8349b38208cd06aa00 404 SUPERFAMILY SSF48452 212 347 6.07E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4593 48937ec0681a5e8349b38208cd06aa00 404 SUPERFAMILY SSF48452 90 147 6.07E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB3871 f247218c4abb4d5a9d2f815f2c2f4a69 438 SUPERFAMILY SSF53098 38 413 5.23E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB3871 f247218c4abb4d5a9d2f815f2c2f4a69 438 Pfam PF01609 Transposase DDE domain 147 382 1.5E-19 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB10097 3b2aadae3cc297d003c538a2d7caee6e 208 Pfam PF07629 Protein of unknown function (DUF1590) 170 201 6.5E-24 T 11-11-2016 IPR011481 Protein of unknown function DUF1590 RB9340 a902e7d1a5ebf63c379c95f6e3ccb404 238 Pfam PF13646 HEAT repeats 88 174 3.3E-16 T 11-11-2016 RB9340 a902e7d1a5ebf63c379c95f6e3ccb404 238 SMART SM00567 E-Z type HEAT repeats 131 160 53.0 T 11-11-2016 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RB9340 a902e7d1a5ebf63c379c95f6e3ccb404 238 SMART SM00567 E-Z type HEAT repeats 100 129 45.0 T 11-11-2016 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RB9340 a902e7d1a5ebf63c379c95f6e3ccb404 238 SMART SM00567 E-Z type HEAT repeats 163 192 25.0 T 11-11-2016 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RB9340 a902e7d1a5ebf63c379c95f6e3ccb404 238 Gene3D G3DSA:1.25.10.10 87 204 3.9E-17 T 11-11-2016 IPR011989 Armadillo-like helical RB9340 a902e7d1a5ebf63c379c95f6e3ccb404 238 SUPERFAMILY SSF48371 94 205 1.99E-18 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB8741 6821b30d5b51404e945f1669e5a4e7fa 157 Gene3D G3DSA:3.30.1330.40 19 137 7.4E-50 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RB8741 6821b30d5b51404e945f1669e5a4e7fa 157 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 21 135 4.0E-44 T 11-11-2016 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RB8741 6821b30d5b51404e945f1669e5a4e7fa 157 SUPERFAMILY SSF55298 19 139 1.73E-47 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RB8741 6821b30d5b51404e945f1669e5a4e7fa 157 Pfam PF07736 Chorismate mutase type I 20 135 1.2E-46 T 11-11-2016 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RB8741 6821b30d5b51404e945f1669e5a4e7fa 157 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 26 136 8.0E-60 T 11-11-2016 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RB11112 b2763737d5cfbf0b64db42a4e266efc2 112 SUPERFAMILY SSF50249 4 111 9.14E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB11112 b2763737d5cfbf0b64db42a4e266efc2 112 Pfam PF01588 Putative tRNA binding domain 14 109 1.1E-11 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RB11112 b2763737d5cfbf0b64db42a4e266efc2 112 Gene3D G3DSA:2.40.50.140 3 111 1.7E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold RB11112 b2763737d5cfbf0b64db42a4e266efc2 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 111 1.6E-43 T 11-11-2016 IPR008231 Probable chaperone CsaA RB9631 7c5725e98e53bd8b4e352df866182c91 443 Pfam PF00668 Condensation domain 4 143 3.0E-7 T 11-11-2016 IPR001242 Condensation domain RB9631 7c5725e98e53bd8b4e352df866182c91 443 SUPERFAMILY SSF52777 5 155 7.41E-19 T 11-11-2016 RB6053 be4eedebcec34fd43464cb8fd5b20853 489 Gene3D G3DSA:3.40.720.10 357 473 2.1E-8 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB6053 be4eedebcec34fd43464cb8fd5b20853 489 Pfam PF07394 Protein of unknown function (DUF1501) 70 487 3.8E-146 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB6053 be4eedebcec34fd43464cb8fd5b20853 489 SUPERFAMILY SSF53649 313 473 2.76E-24 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5191 a8e13f5cca98c460880168da1659ec49 402 Pfam PF02547 Queuosine biosynthesis protein 38 401 1.8E-122 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RB5191 a8e13f5cca98c460880168da1659ec49 402 Gene3D G3DSA:2.40.10.240 98 170 4.4E-8 T 11-11-2016 RB5191 a8e13f5cca98c460880168da1659ec49 402 SUPERFAMILY SSF111337 37 401 1.24E-112 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RB5191 a8e13f5cca98c460880168da1659ec49 402 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 32 402 40.89 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RB5191 a8e13f5cca98c460880168da1659ec49 402 Gene3D G3DSA:3.40.1780.10 37 96 6.3E-93 T 11-11-2016 RB5191 a8e13f5cca98c460880168da1659ec49 402 Gene3D G3DSA:3.40.1780.10 233 401 6.3E-93 T 11-11-2016 RB5191 a8e13f5cca98c460880168da1659ec49 402 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 37 402 4.0E-103 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RB4230 0ad4bed16fe5fde95ecd149b2bd0fbdf 331 PIRSF PIRSF018005 8 331 2.6E-105 T 11-11-2016 IPR017804 Methyltransferase EgtD-like RB4230 0ad4bed16fe5fde95ecd149b2bd0fbdf 331 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 32 327 3.5E-121 T 11-11-2016 IPR017804 Methyltransferase EgtD-like RB4230 0ad4bed16fe5fde95ecd149b2bd0fbdf 331 SUPERFAMILY SSF53335 48 237 4.28E-14 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB4230 0ad4bed16fe5fde95ecd149b2bd0fbdf 331 SUPERFAMILY SSF53335 294 324 4.28E-14 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB4230 0ad4bed16fe5fde95ecd149b2bd0fbdf 331 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 204 326 9.9E-39 T 11-11-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent RB4230 0ad4bed16fe5fde95ecd149b2bd0fbdf 331 Gene3D G3DSA:3.40.50.150 93 206 2.5E-7 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 SUPERFAMILY SSF53335 47 326 9.28E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 Pfam PF01189 16S rRNA methyltransferase RsmB/F 138 324 2.1E-37 T 11-11-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 259 275 1.5E-22 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 209 221 1.5E-22 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 142 152 1.5E-22 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 309 326 1.5E-22 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 109 123 1.5E-22 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 450 495 4.9E-11 T 11-11-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB10533 e69c88f9d44e35d3425c7fff2ce3e042 507 Gene3D G3DSA:3.40.50.150 134 326 2.3E-40 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8102 0f56bfb24a1a32176f47d06998706930 387 SUPERFAMILY SSF54523 24 72 9.42E-15 T 11-11-2016 RB8102 0f56bfb24a1a32176f47d06998706930 387 Pfam PF13633 Prokaryotic N-terminal methylation site 22 47 1.2E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8102 0f56bfb24a1a32176f47d06998706930 387 Pfam PF07596 Protein of unknown function (DUF1559) 49 348 4.2E-54 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8102 0f56bfb24a1a32176f47d06998706930 387 Gene3D G3DSA:3.30.700.10 24 63 5.1E-7 T 11-11-2016 RB8102 0f56bfb24a1a32176f47d06998706930 387 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 22 44 1.3E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5175 cf56c53fa802496ea47ef85480e42bef 409 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 139 334 3.7E-9 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RB5175 cf56c53fa802496ea47ef85480e42bef 409 SUPERFAMILY SSF52172 5 122 2.13E-10 T 11-11-2016 IPR011006 CheY-like superfamily RB5175 cf56c53fa802496ea47ef85480e42bef 409 SUPERFAMILY SSF52540 138 377 4.65E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5175 cf56c53fa802496ea47ef85480e42bef 409 Gene3D G3DSA:3.40.50.2300 5 121 9.2E-10 T 11-11-2016 RB5175 cf56c53fa802496ea47ef85480e42bef 409 Pfam PF00072 Response regulator receiver domain 9 117 5.5E-5 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5175 cf56c53fa802496ea47ef85480e42bef 409 Gene3D G3DSA:3.40.50.300 135 375 4.1E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8693 743a006d567eac1d82cd6aef1f1d648d 331 SUPERFAMILY SSF52540 10 231 2.21E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8693 743a006d567eac1d82cd6aef1f1d648d 331 Pfam PF00005 ABC transporter 28 165 1.5E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB8693 743a006d567eac1d82cd6aef1f1d648d 331 Gene3D G3DSA:3.40.50.300 5 230 1.0E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8693 743a006d567eac1d82cd6aef1f1d648d 331 SMART SM00382 37 217 1.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB2010 17717bc13cab23d00da87b8b01781913 247 Pfam PF06877 Regulator of ribonuclease activity B 139 229 1.2E-8 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain RB2010 17717bc13cab23d00da87b8b01781913 247 Gene3D G3DSA:3.30.70.970 159 229 1.8E-4 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain RB2010 17717bc13cab23d00da87b8b01781913 247 SUPERFAMILY SSF89946 140 229 6.28E-8 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain RB11276 290f9090a02a54fc4bd93bb512c701ba 929 Gene3D G3DSA:2.60.120.260 483 557 1.3E-6 T 11-11-2016 IPR008979 Galactose-binding domain-like RB11276 290f9090a02a54fc4bd93bb512c701ba 929 SUPERFAMILY SSF46626 8 122 8.03E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11276 290f9090a02a54fc4bd93bb512c701ba 929 SUPERFAMILY SSF49785 482 551 1.21E-5 T 11-11-2016 IPR008979 Galactose-binding domain-like RB11276 290f9090a02a54fc4bd93bb512c701ba 929 Pfam PF07583 Protein of unknown function (DUF1549) 158 366 4.7E-78 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB11276 290f9090a02a54fc4bd93bb512c701ba 929 Pfam PF07635 Planctomycete cytochrome C 42 101 2.7E-20 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB11276 290f9090a02a54fc4bd93bb512c701ba 929 Gene3D G3DSA:1.10.760.10 36 119 1.3E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB11276 290f9090a02a54fc4bd93bb512c701ba 929 Pfam PF07587 Protein of unknown function (DUF1553) 654 906 3.7E-89 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB11927 e6bdfc96f6d9f0da279619fcf547a6cb 367 Pfam PF07859 alpha/beta hydrolase fold 131 345 3.0E-18 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB11927 e6bdfc96f6d9f0da279619fcf547a6cb 367 SUPERFAMILY SSF53474 89 346 3.63E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11927 e6bdfc96f6d9f0da279619fcf547a6cb 367 Gene3D G3DSA:3.40.50.1820 99 352 3.7E-59 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1595 4f0c7cbf4ef2775ccab2514a11a60ea5 338 SUPERFAMILY SSF46785 10 88 8.06E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1595 4f0c7cbf4ef2775ccab2514a11a60ea5 338 Gene3D G3DSA:1.10.10.10 6 83 6.6E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB1595 4f0c7cbf4ef2775ccab2514a11a60ea5 338 Gene3D G3DSA:3.40.50.150 90 336 1.8E-62 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB1595 4f0c7cbf4ef2775ccab2514a11a60ea5 338 PIRSF PIRSF005739 7 328 1.3E-37 T 11-11-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 RB1595 4f0c7cbf4ef2775ccab2514a11a60ea5 338 Pfam PF16864 Dimerisation domain 11 92 7.8E-26 T 11-11-2016 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain RB1595 4f0c7cbf4ef2775ccab2514a11a60ea5 338 Pfam PF00891 O-methyltransferase 104 322 6.0E-56 T 11-11-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 RB1595 4f0c7cbf4ef2775ccab2514a11a60ea5 338 SUPERFAMILY SSF53335 93 327 8.19E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB1345 6fb55db37e4e46f8c14d03c4ce10e499 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 84 103 6.8E-16 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RB1345 6fb55db37e4e46f8c14d03c4ce10e499 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 184 206 6.8E-16 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RB1345 6fb55db37e4e46f8c14d03c4ce10e499 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 206 225 6.8E-16 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RB1345 6fb55db37e4e46f8c14d03c4ce10e499 264 Pfam PF01311 Bacterial export proteins, family 1 15 247 9.0E-50 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SMART SM00320 339 376 9.2 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SMART SM00320 703 752 9.6 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SMART SM00320 882 921 53.0 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SMART SM00320 194 241 2.5 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SMART SM00320 755 795 1.4E-9 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SMART SM00320 798 837 1.1E-10 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SMART SM00320 840 879 2.4 T 11-11-2016 IPR001680 WD40 repeat GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SUPERFAMILY SSF101898 327 466 1.28E-15 T 11-11-2016 RB9604 70b748d3756d28c899ec0eefbde8e768 935 SUPERFAMILY SSF101898 158 272 1.28E-15 T 11-11-2016 RB9604 70b748d3756d28c899ec0eefbde8e768 935 Pfam PF12894 Anaphase-promoting complex subunit 4 WD40 domain 763 819 3.2E-7 T 11-11-2016 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain RB9604 70b748d3756d28c899ec0eefbde8e768 935 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 824 838 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB9604 70b748d3756d28c899ec0eefbde8e768 935 Gene3D G3DSA:2.130.10.10 718 925 1.1E-50 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 Pfam PF07635 Planctomycete cytochrome C 63 119 8.3E-12 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB9604 70b748d3756d28c899ec0eefbde8e768 935 SUPERFAMILY SSF50978 721 925 1.8E-48 T 11-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 Gene3D G3DSA:2.130.10.10 339 481 5.0E-14 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 Gene3D G3DSA:2.130.10.10 172 285 5.0E-14 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9604 70b748d3756d28c899ec0eefbde8e768 935 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 782 796 - T 11-11-2016 IPR019775 WD40 repeat, conserved site RB2671 147fe2e07b5b4910576f6d19102fccf8 337 Gene3D G3DSA:2.60.200.20 31 137 6.5E-21 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB2671 147fe2e07b5b4910576f6d19102fccf8 337 SUPERFAMILY SSF49879 32 136 1.42E-21 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB2671 147fe2e07b5b4910576f6d19102fccf8 337 Pfam PF00498 FHA domain 54 123 7.4E-14 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB2671 147fe2e07b5b4910576f6d19102fccf8 337 SMART SM00240 53 108 2.8E-10 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB11156 2104dfd6e504bede416d5d00813456db 350 SUPERFAMILY SSF48239 110 336 1.32E-20 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11156 2104dfd6e504bede416d5d00813456db 350 Gene3D G3DSA:1.50.10.20 107 167 3.3E-17 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11156 2104dfd6e504bede416d5d00813456db 350 Gene3D G3DSA:1.50.10.20 209 338 3.3E-17 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB4288 7d2a1ea84c7adf5e1716edab2c8dcffa 374 Pfam PF01494 FAD binding domain 5 172 8.0E-11 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 RB4288 7d2a1ea84c7adf5e1716edab2c8dcffa 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 135 150 3.2E-9 T 11-11-2016 RB4288 7d2a1ea84c7adf5e1716edab2c8dcffa 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.2E-9 T 11-11-2016 RB4288 7d2a1ea84c7adf5e1716edab2c8dcffa 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 270 285 3.2E-9 T 11-11-2016 RB4288 7d2a1ea84c7adf5e1716edab2c8dcffa 374 Gene3D G3DSA:3.50.50.60 262 306 1.4E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4288 7d2a1ea84c7adf5e1716edab2c8dcffa 374 Gene3D G3DSA:3.50.50.60 5 172 1.4E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4288 7d2a1ea84c7adf5e1716edab2c8dcffa 374 SUPERFAMILY SSF51905 6 167 1.41E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4288 7d2a1ea84c7adf5e1716edab2c8dcffa 374 SUPERFAMILY SSF51905 257 350 1.41E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4485 6e759de1d367ddfa070150131efb2b2d 372 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 7 297 1.2E-81 T 11-11-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RB4485 6e759de1d367ddfa070150131efb2b2d 372 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 8 291 1.2E-52 T 11-11-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RB4485 6e759de1d367ddfa070150131efb2b2d 372 SUPERFAMILY SSF55931 4 365 8.5E-101 T 11-11-2016 RB4485 6e759de1d367ddfa070150131efb2b2d 372 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 372 78.61 T 11-11-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RB6054 4942223f1ccd77a173f2dda2fb8c8ba4 1084 Pfam PF07587 Protein of unknown function (DUF1553) 776 1050 3.3E-78 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB6054 4942223f1ccd77a173f2dda2fb8c8ba4 1084 Pfam PF07583 Protein of unknown function (DUF1549) 214 431 1.4E-74 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB6054 4942223f1ccd77a173f2dda2fb8c8ba4 1084 Pfam PF07635 Planctomycete cytochrome C 87 145 3.6E-14 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB6054 4942223f1ccd77a173f2dda2fb8c8ba4 1084 SUPERFAMILY SSF46626 51 163 5.15E-6 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB8153 514eac674fc5adede43263d661274e4a 486 Pfam PF09967 VWA-like domain (DUF2201) 346 456 1.5E-11 T 11-11-2016 IPR018698 VWA-like domain RB8153 514eac674fc5adede43263d661274e4a 486 SUPERFAMILY SSF53300 343 436 3.81E-7 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8153 514eac674fc5adede43263d661274e4a 486 Pfam PF13203 Putative metallopeptidase domain 38 330 1.6E-14 T 11-11-2016 IPR025154 Putative metallopeptidase domain RB8812 44721e9fad8a607d8dec9b85abcb4a28 302 Gene3D G3DSA:3.40.50.2020 109 295 9.2E-23 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB8812 44721e9fad8a607d8dec9b85abcb4a28 302 SUPERFAMILY SSF53271 141 164 5.11E-17 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB8812 44721e9fad8a607d8dec9b85abcb4a28 302 SUPERFAMILY SSF53271 197 296 5.11E-17 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB12468 84d32a289278a9ec3121dc5ca3c6f0a2 677 Pfam PF13559 Domain of unknown function (DUF4129) 600 664 9.5E-12 T 11-11-2016 IPR025403 Domain of unknown function DUF4129 RB6654 a84bfcb8feba12ca0caf4ea02abb8fec 507 Hamap MF_00484 Glycogen synthase [glgA]. 1 496 40.728 T 11-11-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 RB6654 a84bfcb8feba12ca0caf4ea02abb8fec 507 Pfam PF08323 Starch synthase catalytic domain 2 251 9.8E-79 T 11-11-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 RB6654 a84bfcb8feba12ca0caf4ea02abb8fec 507 SUPERFAMILY SSF53756 77 499 5.23E-119 T 11-11-2016 RB6654 a84bfcb8feba12ca0caf4ea02abb8fec 507 SUPERFAMILY SSF53756 5 46 5.23E-119 T 11-11-2016 RB6654 a84bfcb8feba12ca0caf4ea02abb8fec 507 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 495 1.1E-184 T 11-11-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 RB6654 a84bfcb8feba12ca0caf4ea02abb8fec 507 Gene3D G3DSA:3.40.50.2000 265 478 5.5E-69 T 11-11-2016 RB6654 a84bfcb8feba12ca0caf4ea02abb8fec 507 Pfam PF00534 Glycosyl transferases group 1 307 469 4.8E-16 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB7173 985566a0411032e1d54febfd03fe354c 397 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 278 290 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 RB7173 985566a0411032e1d54febfd03fe354c 397 Pfam PF00348 Polyprenyl synthetase 95 327 1.8E-58 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 RB7173 985566a0411032e1d54febfd03fe354c 397 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 156 170 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 RB7173 985566a0411032e1d54febfd03fe354c 397 SUPERFAMILY SSF48576 59 396 2.08E-82 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB7173 985566a0411032e1d54febfd03fe354c 397 Gene3D G3DSA:1.10.600.10 67 396 4.9E-85 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB1109 6d626929d80e3a2688d7b4a216c3343d 271 Pfam PF06439 Domain of Unknown Function (DUF1080) 56 243 2.3E-37 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB7213 7df0071fb456307a5863f57d0e39aafc 315 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 310 4.3E-73 T 11-11-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RB7213 7df0071fb456307a5863f57d0e39aafc 315 SUPERFAMILY SSF161098 25 307 4.71E-37 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7213 7df0071fb456307a5863f57d0e39aafc 315 Gene3D G3DSA:1.10.3720.10 28 312 2.9E-45 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7213 7df0071fb456307a5863f57d0e39aafc 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 310 3.7E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB12850 cfacbec08199573cf39de50cf3630fe6 309 Pfam PF07592 Rhodopirellula transposase DDE domain 3 308 6.6E-109 T 11-11-2016 IPR011518 Transposase, Rhodopirellula-type RB4340 cfacbec08199573cf39de50cf3630fe6 309 Pfam PF07592 Rhodopirellula transposase DDE domain 3 308 6.6E-109 T 11-11-2016 IPR011518 Transposase, Rhodopirellula-type RB1764 94514cf0ce2574c9dfbacc9c7fbcfdb3 318 SMART SM00448 3 131 0.0017 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB1764 94514cf0ce2574c9dfbacc9c7fbcfdb3 318 Pfam PF13581 Histidine kinase-like ATPase domain 164 309 3.3E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB1764 94514cf0ce2574c9dfbacc9c7fbcfdb3 318 Gene3D G3DSA:3.30.565.10 162 296 3.0E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB1764 94514cf0ce2574c9dfbacc9c7fbcfdb3 318 SUPERFAMILY SSF52172 4 139 1.13E-9 T 11-11-2016 IPR011006 CheY-like superfamily RB1764 94514cf0ce2574c9dfbacc9c7fbcfdb3 318 Gene3D G3DSA:3.40.50.2300 4 154 4.7E-16 T 11-11-2016 RB1764 94514cf0ce2574c9dfbacc9c7fbcfdb3 318 SUPERFAMILY SSF55874 236 299 9.03E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB1764 94514cf0ce2574c9dfbacc9c7fbcfdb3 318 SUPERFAMILY SSF55874 182 209 9.03E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB4127 a92417bf15988efda1dba6c0e6b39838 279 Gene3D G3DSA:3.60.10.10 46 211 1.2E-16 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB4127 a92417bf15988efda1dba6c0e6b39838 279 SUPERFAMILY SSF56219 40 277 2.62E-37 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB4127 a92417bf15988efda1dba6c0e6b39838 279 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 50 268 1.4E-20 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB10922 142d86f0f91e774342f9265128cb2ab3 415 Pfam PF06792 Uncharacterised protein family (UPF0261) 11 406 2.3E-157 T 11-11-2016 IPR008322 Uncharacterised protein family UPF0261 RB10922 142d86f0f91e774342f9265128cb2ab3 415 PIRSF PIRSF033271 8 410 1.1E-159 T 11-11-2016 IPR008322 Uncharacterised protein family UPF0261 RB348 8b7bd57feab59692e26d3f9ac21933df 520 SUPERFAMILY SSF53649 55 478 3.63E-124 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB348 8b7bd57feab59692e26d3f9ac21933df 520 Gene3D G3DSA:3.40.720.10 55 426 2.2E-111 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB348 8b7bd57feab59692e26d3f9ac21933df 520 ProSitePatterns PS00149 Sulfatases signature 2. 157 167 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB348 8b7bd57feab59692e26d3f9ac21933df 520 Pfam PF00884 Sulfatase 56 373 2.9E-79 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB348 8b7bd57feab59692e26d3f9ac21933df 520 Gene3D G3DSA:3.30.1120.10 427 490 2.9E-13 T 11-11-2016 RB6411 b880a405fab37b3e364ca9b16e850cf6 348 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 338 16.029 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB6411 b880a405fab37b3e364ca9b16e850cf6 348 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 42 184 1.7E-43 T 11-11-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RB6411 b880a405fab37b3e364ca9b16e850cf6 348 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 221 1.1E-58 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB6411 b880a405fab37b3e364ca9b16e850cf6 348 SUPERFAMILY SSF55120 11 243 1.18E-62 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RB8396 5cefa9425a8da481260cc93849ff1bf4 393 Gene3D G3DSA:3.40.50.300 21 123 6.2E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8396 5cefa9425a8da481260cc93849ff1bf4 393 Gene3D G3DSA:3.40.50.300 126 174 2.4E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8396 5cefa9425a8da481260cc93849ff1bf4 393 SUPERFAMILY SSF52540 63 314 1.03E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8396 5cefa9425a8da481260cc93849ff1bf4 393 SMART SM00487 22 202 1.2E-4 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RB8396 5cefa9425a8da481260cc93849ff1bf4 393 Pfam PF00271 Helicase conserved C-terminal domain 210 311 8.2E-10 T 11-11-2016 IPR001650 Helicase, C-terminal RB8396 5cefa9425a8da481260cc93849ff1bf4 393 Gene3D G3DSA:3.40.50.300 211 331 2.2E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8396 5cefa9425a8da481260cc93849ff1bf4 393 SMART SM00490 237 313 1.1E-4 T 11-11-2016 IPR001650 Helicase, C-terminal RB8396 5cefa9425a8da481260cc93849ff1bf4 393 Pfam PF04851 Type III restriction enzyme, res subunit 24 110 1.8E-7 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RB2581 f7c39e7e68c30ddd8333a6eaef786643 130 Gene3D G3DSA:2.40.50.220 29 125 5.3E-33 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB2581 f7c39e7e68c30ddd8333a6eaef786643 130 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 39 117 2.0E-39 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB2581 f7c39e7e68c30ddd8333a6eaef786643 130 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 29 117 4.0E-30 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB2581 f7c39e7e68c30ddd8333a6eaef786643 130 SUPERFAMILY SSF159133 29 124 2.22E-28 T 11-11-2016 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml RB7541 1d861abc049cff918aa8dd00ac7233f7 692 Gene3D G3DSA:2.140.10.10 335 689 7.2E-68 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB7541 1d861abc049cff918aa8dd00ac7233f7 692 Gene3D G3DSA:2.140.10.10 17 29 7.2E-68 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB7541 1d861abc049cff918aa8dd00ac7233f7 692 Gene3D G3DSA:2.140.10.10 74 227 7.2E-68 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB7541 1d861abc049cff918aa8dd00ac7233f7 692 SUPERFAMILY SSF50998 78 226 1.57E-13 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB7541 1d861abc049cff918aa8dd00ac7233f7 692 Pfam PF13360 PQQ-like domain 449 688 1.4E-6 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB7541 1d861abc049cff918aa8dd00ac7233f7 692 Pfam PF13360 PQQ-like domain 123 226 2.4E-4 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB7541 1d861abc049cff918aa8dd00ac7233f7 692 SMART SM00564 138 183 0.0064 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB7541 1d861abc049cff918aa8dd00ac7233f7 692 SMART SM00564 583 617 180.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB7541 1d861abc049cff918aa8dd00ac7233f7 692 SUPERFAMILY SSF50998 331 680 1.67E-24 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB645 e7dd50fd926e3efe9d71146681acbfe1 536 Gene3D G3DSA:1.50.10.20 211 424 1.5E-23 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB645 e7dd50fd926e3efe9d71146681acbfe1 536 Gene3D G3DSA:1.50.10.20 468 526 1.5E-23 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB645 e7dd50fd926e3efe9d71146681acbfe1 536 SUPERFAMILY SSF48239 207 444 3.45E-32 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB645 e7dd50fd926e3efe9d71146681acbfe1 536 SUPERFAMILY SSF48239 509 528 3.45E-32 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB7789 a784fc2341734dfbeeef8b263a32673b 312 Gene3D G3DSA:2.130.10.10 15 307 2.6E-23 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB7789 a784fc2341734dfbeeef8b263a32673b 312 SUPERFAMILY SSF82171 18 311 7.06E-24 T 11-11-2016 RB13265 7ed53fd3a9e230b1748ec61a8629d965 783 Gene3D G3DSA:3.30.200.20 443 547 2.2E-21 T 11-11-2016 RB13265 7ed53fd3a9e230b1748ec61a8629d965 783 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 456 479 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB13265 7ed53fd3a9e230b1748ec61a8629d965 783 Gene3D G3DSA:1.10.510.10 548 767 4.0E-45 T 11-11-2016 RB13265 7ed53fd3a9e230b1748ec61a8629d965 783 Pfam PF00069 Protein kinase domain 450 729 1.6E-45 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB13265 7ed53fd3a9e230b1748ec61a8629d965 783 SMART SM00220 450 741 9.6E-52 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB13265 7ed53fd3a9e230b1748ec61a8629d965 783 SUPERFAMILY SSF56112 446 736 4.05E-66 T 11-11-2016 IPR011009 Protein kinase-like domain RB13265 7ed53fd3a9e230b1748ec61a8629d965 783 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 588 600 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB9366 4f6d4dda7d90733e07dd088bb15e1612 342 PIRSF PIRSF026166 1 342 7.9E-86 T 11-11-2016 IPR016833 Putative sodium bile acid cotransporter RB9366 4f6d4dda7d90733e07dd088bb15e1612 342 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 14 332 6.8E-29 T 11-11-2016 IPR016833 Putative sodium bile acid cotransporter RB13148 78ae38ed06137af570ccddf2e99044b4 1012 ProSitePatterns PS00523 Sulfatases signature 1. 617 629 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB13148 78ae38ed06137af570ccddf2e99044b4 1012 SUPERFAMILY SSF53649 568 994 9.76E-136 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB13148 78ae38ed06137af570ccddf2e99044b4 1012 ProSitePatterns PS00523 Sulfatases signature 1. 86 98 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB13148 78ae38ed06137af570ccddf2e99044b4 1012 Gene3D G3DSA:3.30.1120.10 411 525 1.3E-14 T 11-11-2016 RB13148 78ae38ed06137af570ccddf2e99044b4 1012 Gene3D G3DSA:3.30.1120.10 919 992 9.5E-19 T 11-11-2016 RB13148 78ae38ed06137af570ccddf2e99044b4 1012 Pfam PF00884 Sulfatase 571 903 4.2E-78 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB13148 78ae38ed06137af570ccddf2e99044b4 1012 Pfam PF00884 Sulfatase 40 394 3.6E-72 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB13148 78ae38ed06137af570ccddf2e99044b4 1012 SUPERFAMILY SSF53649 487 527 5.76E-119 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB13148 78ae38ed06137af570ccddf2e99044b4 1012 SUPERFAMILY SSF53649 39 451 5.76E-119 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB13148 78ae38ed06137af570ccddf2e99044b4 1012 Gene3D G3DSA:3.40.720.10 37 410 9.4E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB13148 78ae38ed06137af570ccddf2e99044b4 1012 Gene3D G3DSA:3.40.720.10 569 918 8.9E-117 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB3826 1f911622ee88e826a83e2f6f122bcd73 504 Pfam PF07396 Phosphate-selective porin O and P 132 504 1.1E-47 T 11-11-2016 IPR010870 Phosphate-selective porin O/P RB3826 1f911622ee88e826a83e2f6f122bcd73 504 SUPERFAMILY SSF56935 129 325 9.52E-13 T 11-11-2016 RB3826 1f911622ee88e826a83e2f6f122bcd73 504 SUPERFAMILY SSF56935 434 504 9.52E-13 T 11-11-2016 RB3826 1f911622ee88e826a83e2f6f122bcd73 504 SUPERFAMILY SSF56935 355 405 9.52E-13 T 11-11-2016 RB3826 1f911622ee88e826a83e2f6f122bcd73 504 Gene3D G3DSA:2.40.160.10 128 504 4.6E-104 T 11-11-2016 IPR023614 Porin domain RB10335 22524f77988ad2e2558b3830369e16a2 244 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.077 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RB10335 22524f77988ad2e2558b3830369e16a2 244 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 4.7E-73 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RB10335 22524f77988ad2e2558b3830369e16a2 244 Gene3D G3DSA:3.40.1180.10 10 240 6.6E-90 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RB10335 22524f77988ad2e2558b3830369e16a2 244 SUPERFAMILY SSF64005 10 234 1.7E-80 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RB10335 22524f77988ad2e2558b3830369e16a2 244 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 11-11-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 RB10335 22524f77988ad2e2558b3830369e16a2 244 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 4.9E-83 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RB3065 a832f93f9caed463b716949a17ddeacb 266 Pfam PF08241 Methyltransferase domain 76 166 2.1E-14 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RB3065 a832f93f9caed463b716949a17ddeacb 266 Gene3D G3DSA:3.40.50.150 70 172 1.7E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB3065 a832f93f9caed463b716949a17ddeacb 266 SUPERFAMILY SSF53335 67 210 9.4E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10069 1aa4696e8c2dc24c8c53f994802ef73d 157 Pfam PF08308 PEGA domain 44 88 5.4E-11 T 11-11-2016 IPR013229 PEGA RB1840 7f619ed79ee50c03e1d3b71060f30975 280 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 149 255 4.1E-18 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RB1840 7f619ed79ee50c03e1d3b71060f30975 280 Gene3D G3DSA:3.90.470.20 42 159 1.4E-20 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RB1840 7f619ed79ee50c03e1d3b71060f30975 280 Gene3D G3DSA:3.90.470.20 160 256 3.9E-24 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RB1840 7f619ed79ee50c03e1d3b71060f30975 280 SUPERFAMILY SSF56214 149 260 5.36E-25 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RB1840 7f619ed79ee50c03e1d3b71060f30975 280 SUPERFAMILY SSF56214 41 137 2.75E-16 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RB7472 8b2196e10a190a66eace9ac9fee6190d 917 SUPERFAMILY SSF56954 114 181 7.59E-6 T 11-11-2016 RB7472 8b2196e10a190a66eace9ac9fee6190d 917 SUPERFAMILY SSF56954 226 264 7.59E-6 T 11-11-2016 RB7472 8b2196e10a190a66eace9ac9fee6190d 917 SUPERFAMILY SSF56954 617 855 1.7E-13 T 11-11-2016 RB7472 8b2196e10a190a66eace9ac9fee6190d 917 Gene3D G3DSA:1.20.1600.10 622 853 1.9E-7 T 11-11-2016 RB741 2700c2b0bc1c4aa31d6f6b17d3e2503d 190 Gene3D G3DSA:2.60.120.200 76 179 1.9E-12 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB741 2700c2b0bc1c4aa31d6f6b17d3e2503d 190 SUPERFAMILY SSF49899 64 180 3.63E-17 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB741 2700c2b0bc1c4aa31d6f6b17d3e2503d 190 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 63 177 1.5E-14 T 11-11-2016 RB11563 a1753066825beb34cfa97fed4ab53d42 357 Gene3D G3DSA:3.40.50.300 38 269 1.8E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11563 a1753066825beb34cfa97fed4ab53d42 357 SMART SM00382 74 254 7.4E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain RB11563 a1753066825beb34cfa97fed4ab53d42 357 Pfam PF00005 ABC transporter 65 206 9.3E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB11563 a1753066825beb34cfa97fed4ab53d42 357 ProSitePatterns PS00211 ABC transporters family signature. 179 193 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB11563 a1753066825beb34cfa97fed4ab53d42 357 SUPERFAMILY SSF52540 45 268 1.96E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5816 a8ba0eb217e30715d66581f34ac148fd 622 SUPERFAMILY SSF51445 140 510 1.47E-102 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB5816 a8ba0eb217e30715d66581f34ac148fd 622 Pfam PF01120 Alpha-L-fucosidase 131 507 1.2E-104 T 11-11-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 RB5816 a8ba0eb217e30715d66581f34ac148fd 622 Gene3D G3DSA:3.20.20.80 135 510 1.0E-111 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB5816 a8ba0eb217e30715d66581f34ac148fd 622 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 539 621 1.3E-10 T 11-11-2016 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51 RB5816 a8ba0eb217e30715d66581f34ac148fd 622 Gene3D G3DSA:2.60.40.1180 536 620 1.5E-15 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta RB5816 a8ba0eb217e30715d66581f34ac148fd 622 SMART SM00812 139 570 2.2E-211 T 11-11-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 RB18 5b4e136a501555f485c388268924e927 164 Pfam PF07628 Protein of unknown function (DUF1589) 1 164 3.6E-114 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB8854 9ea8c1acda250c7f084b85ba49ce14da 449 Gene3D G3DSA:3.50.50.60 18 195 1.5E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8854 9ea8c1acda250c7f084b85ba49ce14da 449 Gene3D G3DSA:3.50.50.60 313 348 1.5E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8854 9ea8c1acda250c7f084b85ba49ce14da 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 18 52 4.6E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8854 9ea8c1acda250c7f084b85ba49ce14da 449 SUPERFAMILY SSF51905 18 192 8.03E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8854 9ea8c1acda250c7f084b85ba49ce14da 449 SUPERFAMILY SSF51905 302 399 8.03E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8854 9ea8c1acda250c7f084b85ba49ce14da 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 18 40 9.5E-9 T 11-11-2016 RB8854 9ea8c1acda250c7f084b85ba49ce14da 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 330 346 9.5E-9 T 11-11-2016 RB8854 9ea8c1acda250c7f084b85ba49ce14da 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 315 330 9.5E-9 T 11-11-2016 RB12602 65e833ea0753ca021b41409984a9988c 326 Gene3D G3DSA:3.20.20.370 9 153 9.0E-21 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB12602 65e833ea0753ca021b41409984a9988c 326 Gene3D G3DSA:3.20.20.370 191 282 9.0E-21 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB12602 65e833ea0753ca021b41409984a9988c 326 Pfam PF01522 Polysaccharide deacetylase 39 145 1.1E-12 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB12602 65e833ea0753ca021b41409984a9988c 326 SUPERFAMILY SSF88713 38 157 4.94E-18 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RB6310 6b4404413288cdc735c3794982e296d3 1154 Pfam PF13502 AsmA-like C-terminal region 940 1093 8.3E-8 T 11-11-2016 IPR032712 AsmA-like, C-terminal RB6310 6b4404413288cdc735c3794982e296d3 1154 Pfam PF13116 Protein of unknown function 298 550 2.3E-5 T 11-11-2016 IPR025263 Domain of unknown function DUF3971 RB10616 931a016ee836b61236a8b95981d2fcaf 634 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 221 632 6.2E-143 T 11-11-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 RB10616 931a016ee836b61236a8b95981d2fcaf 634 SMART SM00858 121 189 9.0E-11 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 RB10616 931a016ee836b61236a8b95981d2fcaf 634 Pfam PF08666 SAF domain 121 188 2.2E-11 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 RB11502 0bbcf1c2f4273dfbf46dce22390ce7b3 445 Pfam PF00753 Metallo-beta-lactamase superfamily 51 271 3.9E-24 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11502 0bbcf1c2f4273dfbf46dce22390ce7b3 445 SUPERFAMILY SSF56281 4 445 3.38E-112 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11502 0bbcf1c2f4273dfbf46dce22390ce7b3 445 Gene3D G3DSA:3.60.15.10 181 301 1.2E-48 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11502 0bbcf1c2f4273dfbf46dce22390ce7b3 445 Gene3D G3DSA:3.60.15.10 38 134 1.2E-48 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB11502 0bbcf1c2f4273dfbf46dce22390ce7b3 445 Pfam PF14863 Alkyl sulfatase dimerisation 308 444 5.8E-48 T 11-11-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 RB11502 0bbcf1c2f4273dfbf46dce22390ce7b3 445 SMART SM00849 54 271 4.8E-18 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB9722 e2ae6d7b577470811487ea5dec6151d3 621 SUPERFAMILY SSF49777 441 587 1.83E-25 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein RB9722 e2ae6d7b577470811487ea5dec6151d3 621 Gene3D G3DSA:3.90.280.10 440 586 9.7E-29 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein RB9722 e2ae6d7b577470811487ea5dec6151d3 621 Pfam PF01161 Phosphatidylethanolamine-binding protein 454 584 1.2E-12 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein RB9722 e2ae6d7b577470811487ea5dec6151d3 621 Pfam PF14240 YHYH protein 198 293 1.8E-12 T 11-11-2016 IPR025924 YHYH domain RB10269 be4a8f546b73b0967f7737adf1b99c75 294 Pfam PF13653 Glycerophosphoryl diester phosphodiesterase family 253 282 3.7E-9 T 11-11-2016 RB10269 be4a8f546b73b0967f7737adf1b99c75 294 Gene3D G3DSA:3.20.20.190 131 291 5.6E-9 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RB10269 be4a8f546b73b0967f7737adf1b99c75 294 SUPERFAMILY SSF51695 49 287 6.49E-16 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RB12907 09dd035353e09a179f172da4cf09ab0b 228 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 91 218 5.7E-15 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RB12907 09dd035353e09a179f172da4cf09ab0b 228 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 89 224 15.67 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RB5782 ad1b584335c0d13bff27e089265bf1a5 506 SUPERFAMILY SSF50494 211 397 8.18E-23 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB5782 ad1b584335c0d13bff27e089265bf1a5 506 Gene3D G3DSA:3.40.30.10 41 127 2.3E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5782 ad1b584335c0d13bff27e089265bf1a5 506 Pfam PF00085 Thioredoxin 43 126 5.8E-12 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 RB5782 ad1b584335c0d13bff27e089265bf1a5 506 Pfam PF13365 Trypsin-like peptidase domain 240 384 5.7E-17 T 11-11-2016 RB5782 ad1b584335c0d13bff27e089265bf1a5 506 Gene3D G3DSA:2.40.10.10 205 303 5.6E-7 T 11-11-2016 RB5782 ad1b584335c0d13bff27e089265bf1a5 506 SUPERFAMILY SSF52833 44 127 1.73E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5782 ad1b584335c0d13bff27e089265bf1a5 506 Gene3D G3DSA:2.40.10.10 308 396 2.5E-6 T 11-11-2016 RB2702 bd0b290268bfa89e9981dafc72e7393f 307 SUPERFAMILY SSF49899 28 305 4.12E-52 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2702 bd0b290268bfa89e9981dafc72e7393f 307 Gene3D G3DSA:2.60.120.200 30 304 5.6E-53 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2702 bd0b290268bfa89e9981dafc72e7393f 307 Pfam PF00722 Glycosyl hydrolases family 16 67 255 1.1E-16 T 11-11-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 RB4105 e8f6ed66dc95efef94608abdc59d8846 208 Pfam PF04002 RadC-like JAB domain 85 206 1.1E-38 T 11-11-2016 IPR025657 RadC-like JAB domain RB4105 e8f6ed66dc95efef94608abdc59d8846 208 Gene3D G3DSA:3.40.140.10 82 206 1.1E-38 T 11-11-2016 RB4105 e8f6ed66dc95efef94608abdc59d8846 208 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 158 163 - T 11-11-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site RB5432 01d1d519c22402b7dbd8877303f24720 165 SUPERFAMILY SSF111038 23 165 1.44E-42 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB5432 01d1d519c22402b7dbd8877303f24720 165 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 34 165 1.0E-29 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB5432 01d1d519c22402b7dbd8877303f24720 165 Gene3D G3DSA:2.60.120.460 16 165 9.4E-46 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB5432 01d1d519c22402b7dbd8877303f24720 165 Pfam PF01894 Uncharacterised protein family UPF0047 42 162 7.3E-33 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB5432 01d1d519c22402b7dbd8877303f24720 165 PIRSF PIRSF004681 22 165 5.6E-45 T 11-11-2016 IPR001602 Uncharacterised protein family UPF0047 RB8677 51690236b697bafb4110f37dcca5ffcc 295 Gene3D G3DSA:3.40.50.300 3 291 6.7E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8677 51690236b697bafb4110f37dcca5ffcc 295 SUPERFAMILY SSF52540 107 291 2.52E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8677 51690236b697bafb4110f37dcca5ffcc 295 SUPERFAMILY SSF52540 3 76 2.52E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8677 51690236b697bafb4110f37dcca5ffcc 295 Pfam PF06745 KaiC 6 97 1.2E-10 T 11-11-2016 IPR014774 KaiC-like domain RB10702 8dd9b9e8ad8449c85ae4dc6b46880b7e 162 Pfam PF02472 Biopolymer transport protein ExbD/TolR 20 148 6.8E-15 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RB11340 30345eb484e06feb5f81611c3ba779b2 69 SUPERFAMILY SSF52540 1 58 8.23E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11340 30345eb484e06feb5f81611c3ba779b2 69 Gene3D G3DSA:3.40.50.300 1 49 4.2E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3755 2034b1f24ac06931bc97e46999ec3d46 477 Gene3D G3DSA:3.30.1120.10 406 469 1.4E-12 T 11-11-2016 RB3755 2034b1f24ac06931bc97e46999ec3d46 477 SUPERFAMILY SSF53649 23 466 3.33E-111 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB3755 2034b1f24ac06931bc97e46999ec3d46 477 Pfam PF00884 Sulfatase 24 372 7.8E-56 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3755 2034b1f24ac06931bc97e46999ec3d46 477 Pfam PF16347 Domain of unknown function (DUF4976) 400 463 1.4E-7 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB3755 2034b1f24ac06931bc97e46999ec3d46 477 Gene3D G3DSA:3.40.720.10 21 391 2.5E-92 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2748 6bf192a50f5af7d9baa595a15b40c14a 387 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 11 365 51.29 T 11-11-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 RB2748 6bf192a50f5af7d9baa595a15b40c14a 387 PIRSF PIRSF004762 1 374 1.9E-115 T 11-11-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 RB2748 6bf192a50f5af7d9baa595a15b40c14a 387 Gene3D G3DSA:3.20.20.70 22 353 7.3E-57 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB2748 6bf192a50f5af7d9baa595a15b40c14a 387 SUPERFAMILY SSF102114 21 354 7.19E-47 T 11-11-2016 RB2748 6bf192a50f5af7d9baa595a15b40c14a 387 Pfam PF13394 4Fe-4S single cluster domain 68 153 9.5E-5 T 11-11-2016 RB2748 6bf192a50f5af7d9baa595a15b40c14a 387 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 13 362 1.5E-172 T 11-11-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 RB2748 6bf192a50f5af7d9baa595a15b40c14a 387 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 58 361 5.0E-112 T 11-11-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 RB2748 6bf192a50f5af7d9baa595a15b40c14a 387 Pfam PF04055 Radical SAM superfamily 66 228 2.6E-10 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB7120 58735339dc3ce2f7f26c4ff295b262c5 346 Pfam PF13360 PQQ-like domain 66 320 2.5E-37 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB7120 58735339dc3ce2f7f26c4ff295b262c5 346 Gene3D G3DSA:2.120.10.30 120 294 7.8E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB7120 58735339dc3ce2f7f26c4ff295b262c5 346 SUPERFAMILY SSF50998 70 322 5.81E-14 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB1279 cbcf2eeed3a5cd50abbcc9c5dc475483 145 Gene3D G3DSA:3.10.50.40 3 118 5.3E-17 T 11-11-2016 RB1279 cbcf2eeed3a5cd50abbcc9c5dc475483 145 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 107 2.3E-14 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RB1279 cbcf2eeed3a5cd50abbcc9c5dc475483 145 SUPERFAMILY SSF54534 4 109 1.71E-20 T 11-11-2016 RB5226 9d4e592fcb9e7ce519a16ecc43e5fb94 201 Pfam PF03352 Methyladenine glycosylase 20 194 1.4E-72 T 11-11-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 RB5226 9d4e592fcb9e7ce519a16ecc43e5fb94 201 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 17 193 3.5E-71 T 11-11-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 RB5226 9d4e592fcb9e7ce519a16ecc43e5fb94 201 Gene3D G3DSA:1.10.340.30 16 194 3.3E-77 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RB5226 9d4e592fcb9e7ce519a16ecc43e5fb94 201 SUPERFAMILY SSF48150 16 196 2.9E-72 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RB3625 ce61f6224145dc0e89d12f78724c8243 199 Pfam PF11845 Protein of unknown function (DUF3365) 59 176 7.8E-11 T 11-11-2016 IPR021796 Protein of unknown function DUF3365 RB1597 f7f28fc6cf34585d72865452924e9ef0 177 SUPERFAMILY SSF143990 29 175 1.7E-56 T 11-11-2016 RB1597 f7f28fc6cf34585d72865452924e9ef0 177 Pfam PF08719 Domain of unknown function (DUF1768) 36 174 1.9E-39 T 11-11-2016 IPR012816 NADAR RB1597 f7f28fc6cf34585d72865452924e9ef0 177 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 34 173 4.6E-45 T 11-11-2016 IPR012816 NADAR RB87 684bc247d1cbe5643d436007b7a87fad 428 SUPERFAMILY SSF48239 69 93 3.53E-20 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB87 684bc247d1cbe5643d436007b7a87fad 428 SUPERFAMILY SSF48239 168 417 3.53E-20 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB87 684bc247d1cbe5643d436007b7a87fad 428 SUPERFAMILY SSF81853 2 241 9.94E-25 T 11-11-2016 RB87 684bc247d1cbe5643d436007b7a87fad 428 Gene3D G3DSA:1.50.10.20 68 280 1.7E-15 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB12151 3b509added6a3bf4acf9b360958530a0 178 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 20 143 1.2E-11 T 11-11-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like RB12151 3b509added6a3bf4acf9b360958530a0 178 SUPERFAMILY SSF110857 18 109 1.57E-13 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like RB12151 3b509added6a3bf4acf9b360958530a0 178 Gene3D G3DSA:3.10.490.10 20 146 5.9E-10 T 11-11-2016 IPR013024 Butirosin biosynthesis, BtrG-like RB8219 e458ed42de69165d7833c575d6b2c7fd 393 Gene3D G3DSA:3.40.640.10 64 282 1.1E-67 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB8219 e458ed42de69165d7833c575d6b2c7fd 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 11-11-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 RB8219 e458ed42de69165d7833c575d6b2c7fd 393 Gene3D G3DSA:3.90.1150.10 283 387 2.0E-19 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB8219 e458ed42de69165d7833c575d6b2c7fd 393 SUPERFAMILY SSF53383 20 388 2.42E-95 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB8219 e458ed42de69165d7833c575d6b2c7fd 393 Pfam PF00155 Aminotransferase class I and II 51 385 5.7E-56 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RB11884 9fad2dc390654b10d3aad9af101dcfd0 468 Pfam PF07586 Protein of unknown function (DUF1552) 46 351 4.7E-78 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB10916 9dcb48c3ec760d32bf22436550fac9af 503 Pfam PF07244 Surface antigen variable number repeat 350 427 3.1E-13 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 RB10916 9dcb48c3ec760d32bf22436550fac9af 503 Pfam PF07244 Surface antigen variable number repeat 182 256 1.4E-8 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 RB10916 9dcb48c3ec760d32bf22436550fac9af 503 Pfam PF07244 Surface antigen variable number repeat 98 179 1.6E-9 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 RB10916 9dcb48c3ec760d32bf22436550fac9af 503 Pfam PF07244 Surface antigen variable number repeat 260 346 4.3E-12 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 RB7999 d0c78dac17e20160c8648bea711b2d3e 357 Pfam PF00701 Dihydrodipicolinate synthetase family 25 220 1.7E-6 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB7999 d0c78dac17e20160c8648bea711b2d3e 357 SMART SM01130 15 340 9.8E-9 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RB7999 d0c78dac17e20160c8648bea711b2d3e 357 Gene3D G3DSA:3.20.20.70 19 340 1.1E-48 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB7999 d0c78dac17e20160c8648bea711b2d3e 357 SUPERFAMILY SSF51569 19 339 1.88E-30 T 11-11-2016 RB6190 15fba2045f214e26724dc8735c8c50be 459 Gene3D G3DSA:3.40.50.1110 70 270 3.8E-28 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6190 15fba2045f214e26724dc8735c8c50be 459 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 75 260 2.1E-15 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6190 15fba2045f214e26724dc8735c8c50be 459 SUPERFAMILY SSF52266 71 270 1.67E-28 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB13142 3ab6fdccedc3778658523d39af3ebdfe 125 Pfam PF07644 Planctomycete PGAMP 54 88 2.4E-20 T 11-11-2016 IPR011503 Planctomycete PGAMP RB4201 37a5155e3211fb160538c26a1f6804e1 293 Pfam PF08867 FRG domain 44 147 4.6E-25 T 11-11-2016 IPR014966 FRG domain RB4201 37a5155e3211fb160538c26a1f6804e1 293 SMART SM00901 41 157 9.8E-35 T 11-11-2016 IPR014966 FRG domain RB11121 06efdc66d799535708ca7cbe10272c56 235 Pfam PF07606 Protein of unknown function (DUF1569) 86 235 7.9E-57 T 11-11-2016 IPR011463 Protein of unknown function DUF1569 RB9395 f64fabce0dd25ebe3224b00b96ba3897 974 Gene3D G3DSA:1.20.1640.10 716 963 3.2E-19 T 11-11-2016 RB9395 f64fabce0dd25ebe3224b00b96ba3897 974 Gene3D G3DSA:1.20.1640.10 331 514 1.9E-23 T 11-11-2016 RB9395 f64fabce0dd25ebe3224b00b96ba3897 974 SUPERFAMILY SSF82866 742 886 7.06E-15 T 11-11-2016 RB9395 f64fabce0dd25ebe3224b00b96ba3897 974 SUPERFAMILY SSF82866 914 954 7.06E-15 T 11-11-2016 RB9395 f64fabce0dd25ebe3224b00b96ba3897 974 Pfam PF03176 MMPL family 591 889 1.7E-35 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB9395 f64fabce0dd25ebe3224b00b96ba3897 974 Pfam PF03176 MMPL family 919 965 7.8E-6 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB9395 f64fabce0dd25ebe3224b00b96ba3897 974 Pfam PF03176 MMPL family 283 524 4.6E-37 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB9395 f64fabce0dd25ebe3224b00b96ba3897 974 SUPERFAMILY SSF82866 329 513 9.16E-21 T 11-11-2016 RB2794 312d3d3b645fd693c34ab8afd4f745d1 341 SUPERFAMILY SSF56219 73 333 4.58E-22 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB2794 312d3d3b645fd693c34ab8afd4f745d1 341 PRINTS PR00130 DNase I signature 83 112 9.6E-6 T 11-11-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 RB2794 312d3d3b645fd693c34ab8afd4f745d1 341 PRINTS PR00130 DNase I signature 311 331 9.6E-6 T 11-11-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 RB2794 312d3d3b645fd693c34ab8afd4f745d1 341 SMART SM00476 49 334 2.3E-11 T 11-11-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 RB2794 312d3d3b645fd693c34ab8afd4f745d1 341 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 76 326 7.4E-14 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB2794 312d3d3b645fd693c34ab8afd4f745d1 341 Gene3D G3DSA:3.60.10.10 73 333 3.9E-53 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 171 199 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 Gene3D G3DSA:3.40.50.720 35 266 2.2E-68 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 172 1.7E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 111 122 1.7E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 203 1.7E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 36 206 2.0E-4 T 11-11-2016 RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 SUPERFAMILY SSF51735 30 296 4.18E-70 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 111 122 7.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 174 7.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 203 7.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 222 7.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 37 54 7.7E-20 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB12296 816dc3e8ca8a18f3d38a50a869563c0e 339 Pfam PF00106 short chain dehydrogenase 36 221 1.5E-53 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB10483 cd4d8f112e112f295f18196a1f0f6d9e 133 Pfam PF11950 Protein of unknown function (DUF3467) 22 113 4.1E-21 T 11-11-2016 IPR021857 Protein of unknown function DUF3467 RB4646 13873a60e7dfe627507708fd17f45615 202 Pfam PF00510 Cytochrome c oxidase subunit III 53 188 4.3E-8 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4646 13873a60e7dfe627507708fd17f45615 202 Gene3D G3DSA:1.20.120.80 14 189 1.4E-27 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB4646 13873a60e7dfe627507708fd17f45615 202 SUPERFAMILY SSF81452 12 189 2.22E-29 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 Pfam PF00294 pfkB family carbohydrate kinase 8 299 2.4E-68 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 SUPERFAMILY SSF53613 8 307 7.33E-85 T 11-11-2016 IPR029056 Ribokinase-like RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 10 305 1.7E-113 T 11-11-2016 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 PRINTS PR00990 Ribokinase signature 39 58 1.7E-31 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 PRINTS PR00990 Ribokinase signature 12 33 1.7E-31 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 PRINTS PR00990 Ribokinase signature 111 124 1.7E-31 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 PRINTS PR00990 Ribokinase signature 179 194 1.7E-31 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 PRINTS PR00990 Ribokinase signature 223 234 1.7E-31 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 Gene3D G3DSA:3.40.1190.20 8 309 1.1E-92 T 11-11-2016 IPR029056 Ribokinase-like RB3499 3961c33dc0a6ba111dd25b3a59761abe 314 Hamap MF_01987 Ribokinase [rbsK]. 8 307 26.797 T 11-11-2016 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 RB5930 8574d1f17e078e0cf26117925a02390b 216 SUPERFAMILY SSF64288 48 208 1.26E-15 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RB5930 8574d1f17e078e0cf26117925a02390b 216 Gene3D G3DSA:3.40.1410.10 48 208 2.1E-15 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RB8430 8ecb8ca3b4c06cc3df4350d45dfb0199 424 Pfam PF01566 Natural resistance-associated macrophage protein 35 396 6.6E-87 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RB8430 8ecb8ca3b4c06cc3df4350d45dfb0199 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 5.1E-8 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RB8430 8ecb8ca3b4c06cc3df4350d45dfb0199 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 199 222 5.1E-8 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RB8430 8ecb8ca3b4c06cc3df4350d45dfb0199 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 306 325 5.1E-8 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RB8430 8ecb8ca3b4c06cc3df4350d45dfb0199 424 PRINTS PR00447 Natural resistance-associated macrophage protein signature 365 384 5.1E-8 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RB3505 112aac219d124d4fbbb8943e6b953538 35 Pfam PF07625 Protein of unknown function (DUF1586) 3 22 1.3E-13 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB13241 f1a55669df2d064444252fa40f526362 167 SUPERFAMILY SSF88946 7 94 2.04E-17 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB13241 f1a55669df2d064444252fa40f526362 167 SUPERFAMILY SSF88659 103 159 1.26E-8 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB13241 f1a55669df2d064444252fa40f526362 167 Gene3D G3DSA:1.10.1740.10 6 102 3.6E-18 T 11-11-2016 RB13241 f1a55669df2d064444252fa40f526362 167 Pfam PF08281 Sigma-70, region 4 105 155 7.0E-11 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB13241 f1a55669df2d064444252fa40f526362 167 Pfam PF04542 Sigma-70 region 2 14 80 1.5E-13 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB13241 f1a55669df2d064444252fa40f526362 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 157 1.1E-20 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB13241 f1a55669df2d064444252fa40f526362 167 Gene3D G3DSA:1.10.10.10 104 161 3.3E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB12636 fe72c03e3f54941ec67db28e5e43427c 428 Pfam PF02222 ATP-grasp domain 125 285 1.5E-4 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RB12636 fe72c03e3f54941ec67db28e5e43427c 428 Gene3D G3DSA:3.30.470.20 117 309 2.0E-21 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB12636 fe72c03e3f54941ec67db28e5e43427c 428 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 279 286 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RB12636 fe72c03e3f54941ec67db28e5e43427c 428 SUPERFAMILY SSF56059 115 306 8.49E-22 T 11-11-2016 RB12636 fe72c03e3f54941ec67db28e5e43427c 428 Gene3D G3DSA:3.40.50.20 61 116 4.2E-4 T 11-11-2016 IPR016185 Pre-ATP-grasp domain RB3700 4c9ff8ec6d67235205f77e2ba6848115 157 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 133 1.4E-32 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RB3700 4c9ff8ec6d67235205f77e2ba6848115 157 Gene3D G3DSA:3.20.20.70 5 136 4.1E-45 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB3700 4c9ff8ec6d67235205f77e2ba6848115 157 SUPERFAMILY SSF51395 7 138 1.25E-44 T 11-11-2016 RB8018 b13cd6c18b11d3beb27a0c5d2cc77458 863 Pfam PF07626 Protein of unknown function (DUF1587) 147 214 5.6E-21 T 11-11-2016 IPR013036 Domain of unknown function DUF1587 RB8018 b13cd6c18b11d3beb27a0c5d2cc77458 863 Pfam PF07637 Protein of unknown function (DUF1595) 450 511 6.5E-18 T 11-11-2016 IPR013043 Domain of unknown function DUF1595 RB8018 b13cd6c18b11d3beb27a0c5d2cc77458 863 Pfam PF07635 Planctomycete cytochrome C 63 110 6.4E-9 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB8018 b13cd6c18b11d3beb27a0c5d2cc77458 863 Pfam PF07624 Protein of unknown function (DUF1585) 787 860 1.4E-20 T 11-11-2016 IPR011478 Domain of unknown function DUF1585 RB8018 b13cd6c18b11d3beb27a0c5d2cc77458 863 Pfam PF07627 Protein of unknown function (DUF1588) 668 765 7.9E-27 T 11-11-2016 IPR013039 Domain of unknown function DUF1588 RB8018 b13cd6c18b11d3beb27a0c5d2cc77458 863 Pfam PF07631 Protein of unknown function (DUF1592) 522 649 4.8E-46 T 11-11-2016 IPR013042 Domain of unknown function DUF1592 RB12860 512932cf84c04c7660372a2a70a2821e 411 SUPERFAMILY SSF161098 188 393 1.42E-22 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB12860 512932cf84c04c7660372a2a70a2821e 411 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 210 409 2.6E-27 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB12860 512932cf84c04c7660372a2a70a2821e 411 Gene3D G3DSA:1.10.3720.10 186 406 5.9E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB12860 512932cf84c04c7660372a2a70a2821e 411 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 71 7.0E-13 T 11-11-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RB5637 72385b9daf573bc8a30eb661c9d65801 250 Gene3D G3DSA:3.20.20.150 3 248 3.2E-57 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB5637 72385b9daf573bc8a30eb661c9d65801 250 PIRSF PIRSF006241 1 248 3.4E-40 T 11-11-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RB5637 72385b9daf573bc8a30eb661c9d65801 250 Pfam PF01261 Xylose isomerase-like TIM barrel 35 198 2.1E-23 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB5637 72385b9daf573bc8a30eb661c9d65801 250 SUPERFAMILY SSF51658 4 247 2.35E-56 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB5083 f7b882f7fe5743728261469f6cbee956 339 Pfam PF14358 Domain of unknown function (DUF4405) 4 52 2.0E-6 T 11-11-2016 IPR025517 Domain of unknown function DUF4405 RB5943 048ed22fab6baf9bfab5c654e1091742 132 SMART SM00448 15 127 1.2E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5943 048ed22fab6baf9bfab5c654e1091742 132 SUPERFAMILY SSF52172 14 132 3.27E-34 T 11-11-2016 IPR011006 CheY-like superfamily RB5943 048ed22fab6baf9bfab5c654e1091742 132 Pfam PF00072 Response regulator receiver domain 17 127 8.3E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5943 048ed22fab6baf9bfab5c654e1091742 132 Gene3D G3DSA:3.40.50.2300 10 132 4.4E-34 T 11-11-2016 RB6339 9d9768275178683ae7784e4c9f3871b9 296 Pfam PF06182 ABC-2 family transporter protein 79 295 3.0E-19 T 11-11-2016 IPR010390 Protein of unknown function DUF990 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 Gene3D G3DSA:2.30.42.10 352 446 4.1E-21 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 Pfam PF13180 PDZ domain 361 438 7.3E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 SMART SM00228 350 432 3.7E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 Gene3D G3DSA:2.40.10.10 250 351 3.3E-40 T 11-11-2016 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 SUPERFAMILY SSF50156 315 434 9.72E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 Pfam PF13365 Trypsin-like peptidase domain 163 311 3.4E-27 T 11-11-2016 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 PRINTS PR00834 HtrA/DegQ protease family signature 304 321 2.7E-39 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 PRINTS PR00834 HtrA/DegQ protease family signature 248 272 2.7E-39 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 PRINTS PR00834 HtrA/DegQ protease family signature 390 402 2.7E-39 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 PRINTS PR00834 HtrA/DegQ protease family signature 282 299 2.7E-39 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 PRINTS PR00834 HtrA/DegQ protease family signature 207 227 2.7E-39 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 PRINTS PR00834 HtrA/DegQ protease family signature 186 198 2.7E-39 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 SUPERFAMILY SSF50494 160 359 2.11E-51 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 SUPERFAMILY SSF50494 94 118 2.11E-51 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB11879 ad2c2bfbcd05b6308817d3e1a65f78aa 458 Gene3D G3DSA:2.40.10.10 160 249 6.4E-23 T 11-11-2016 RB1896 52cb7bfb6cb3b956a38d212d3b3415c0 106 Pfam PF06961 Protein of unknown function (DUF1294) 28 82 3.1E-21 T 11-11-2016 IPR010718 Protein of unknown function DUF1294 RB4575 1597049fa161a3ac903d53614f6b4837 347 Pfam PF14717 Domain of unknown function (DUF4465) 123 305 1.8E-52 T 11-11-2016 IPR027828 Protein of unknown function DUF4465 RB4575 1597049fa161a3ac903d53614f6b4837 347 Pfam PF07589 PEP-CTERM motif 310 332 2.2E-5 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB4575 1597049fa161a3ac903d53614f6b4837 347 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 311 333 7.1E-5 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB1839 a33605b65f9e30ed891d6e9a87458b68 540 Pfam PF02424 ApbE family 139 419 4.2E-84 T 11-11-2016 IPR024932 Flavin transferase ApbE GO:0017013 RB1839 a33605b65f9e30ed891d6e9a87458b68 540 SUPERFAMILY SSF143631 132 432 6.67E-92 T 11-11-2016 IPR003374 ApbE-like domain RB1839 a33605b65f9e30ed891d6e9a87458b68 540 Pfam PF04400 Protein of unknown function (DUF539) 494 539 5.2E-6 T 11-11-2016 IPR007495 (Na+)-NQR maturation factor NqrM RB6949 633545c1c4965a4365f00d8815eb144a 362 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 11 316 2.2E-31 T 11-11-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RB3179 69f799a11b044d4d519773bb5237ee56 811 Pfam PF03176 MMPL family 615 806 1.5E-11 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB3179 69f799a11b044d4d519773bb5237ee56 811 Pfam PF03176 MMPL family 130 417 2.0E-13 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RB3179 69f799a11b044d4d519773bb5237ee56 811 Gene3D G3DSA:1.20.1640.10 194 399 4.8E-19 T 11-11-2016 RB3179 69f799a11b044d4d519773bb5237ee56 811 Gene3D G3DSA:1.20.1640.10 615 801 6.8E-28 T 11-11-2016 RB3179 69f799a11b044d4d519773bb5237ee56 811 SUPERFAMILY SSF82866 177 395 1.57E-19 T 11-11-2016 RB3179 69f799a11b044d4d519773bb5237ee56 811 SUPERFAMILY SSF82866 596 793 8.63E-28 T 11-11-2016 RB3217 357b7f07721c26c7156ea58a0b924d2d 164 Pfam PF02675 S-adenosylmethionine decarboxylase 30 135 1.2E-25 T 11-11-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 RB3217 357b7f07721c26c7156ea58a0b924d2d 164 Gene3D G3DSA:3.60.90.10 19 139 1.2E-28 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 RB3217 357b7f07721c26c7156ea58a0b924d2d 164 SUPERFAMILY SSF56276 25 138 1.69E-26 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 RB6556 14507d97e48921870a8870c5067b014d 473 SUPERFAMILY SSF53649 296 458 5.49E-22 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6556 14507d97e48921870a8870c5067b014d 473 Gene3D G3DSA:3.40.720.10 287 449 2.8E-8 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB6556 14507d97e48921870a8870c5067b014d 473 Pfam PF07394 Protein of unknown function (DUF1501) 54 472 6.5E-152 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB1367 f816c9f30ffbd52234b9ce403dda9da5 313 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 113 287 4.1E-43 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RB1367 f816c9f30ffbd52234b9ce403dda9da5 313 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 117 287 1.4E-55 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RB5336 5105db1ab3eba4964aaa1e22a8a5bb73 106 Gene3D G3DSA:2.102.10.10 5 103 8.1E-33 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB5336 5105db1ab3eba4964aaa1e22a8a5bb73 106 SUPERFAMILY SSF50022 1 102 3.8E-34 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB5336 5105db1ab3eba4964aaa1e22a8a5bb73 106 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 5 100 2.2E-23 T 11-11-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 RB5336 5105db1ab3eba4964aaa1e22a8a5bb73 106 Pfam PF00355 Rieske [2Fe-2S] domain 7 84 7.5E-18 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB9551 9c0e42089b60a9068421b8aab1120c7a 593 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 290 6.4E-73 T 11-11-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 RB9551 9c0e42089b60a9068421b8aab1120c7a 593 SUPERFAMILY SSF52540 332 536 1.07E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9551 9c0e42089b60a9068421b8aab1120c7a 593 SMART SM00382 7 229 0.43 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9551 9c0e42089b60a9068421b8aab1120c7a 593 SMART SM00382 329 535 0.55 T 11-11-2016 IPR003593 AAA+ ATPase domain RB9551 9c0e42089b60a9068421b8aab1120c7a 593 PIRSF PIRSF001327 1 590 7.8E-269 T 11-11-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 RB9551 9c0e42089b60a9068421b8aab1120c7a 593 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 8 574 5.8E-245 T 11-11-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 RB9551 9c0e42089b60a9068421b8aab1120c7a 593 Pfam PF02374 Anion-transporting ATPase 9 290 2.4E-72 T 11-11-2016 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 RB9551 9c0e42089b60a9068421b8aab1120c7a 593 Pfam PF02374 Anion-transporting ATPase 332 464 5.4E-29 T 11-11-2016 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 RB9551 9c0e42089b60a9068421b8aab1120c7a 593 Pfam PF02374 Anion-transporting ATPase 472 586 2.0E-7 T 11-11-2016 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 RB9551 9c0e42089b60a9068421b8aab1120c7a 593 SUPERFAMILY SSF52540 7 284 8.67E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9551 9c0e42089b60a9068421b8aab1120c7a 593 Gene3D G3DSA:3.40.50.300 8 262 4.0E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9551 9c0e42089b60a9068421b8aab1120c7a 593 Gene3D G3DSA:3.40.50.300 324 572 1.8E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13306 3778a443dc4f8ff2aa7f96d01e5e981d 247 Pfam PF00857 Isochorismatase family 77 230 8.2E-37 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB13306 3778a443dc4f8ff2aa7f96d01e5e981d 247 SUPERFAMILY SSF52499 22 237 5.76E-52 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB13306 3778a443dc4f8ff2aa7f96d01e5e981d 247 Gene3D G3DSA:3.40.50.850 34 237 5.6E-55 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB4909 d3189de2a2cc815a7dc8518cd314928d 94 TIGRFAM TIGR02230 ATPase_gene1: putative F0F1-ATPase subunit 3 91 7.1E-50 T 11-11-2016 IPR011744 F0F1-ATPase subunit, putative RB4909 d3189de2a2cc815a7dc8518cd314928d 94 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 33 86 2.9E-11 T 11-11-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter RB10235 b84b6a68b36eaedef1491009541d501a 181 Gene3D G3DSA:3.40.50.850 1 177 3.1E-43 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB10235 b84b6a68b36eaedef1491009541d501a 181 SUPERFAMILY SSF52499 2 180 5.89E-46 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB10235 b84b6a68b36eaedef1491009541d501a 181 Pfam PF00857 Isochorismatase family 4 150 6.2E-34 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB11688 a6fdfef55b44ad90b43dbe94bb0bc297 437 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 50 213 1.7E-48 T 11-11-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 RB11688 a6fdfef55b44ad90b43dbe94bb0bc297 437 SUPERFAMILY SSF53756 172 290 1.57E-5 T 11-11-2016 RB105 ea619ed3d95bd32fff0922738e3d3031 383 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 209 270 1.2E-10 T 11-11-2016 RB105 ea619ed3d95bd32fff0922738e3d3031 383 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 60 122 6.7E-11 T 11-11-2016 RB105 ea619ed3d95bd32fff0922738e3d3031 383 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 308 367 5.5E-9 T 11-11-2016 RB105 ea619ed3d95bd32fff0922738e3d3031 383 SUPERFAMILY SSF69318 47 244 1.22E-35 T 11-11-2016 RB105 ea619ed3d95bd32fff0922738e3d3031 383 SUPERFAMILY SSF69318 202 381 4.05E-30 T 11-11-2016 RB105 ea619ed3d95bd32fff0922738e3d3031 383 Gene3D G3DSA:2.130.10.130 53 381 3.1E-27 T 11-11-2016 RB3152 2bb1435e915795eedbcfc394e1f20bab 68 Pfam PF07623 Protein of unknown function (DUF1584) 2 28 3.9E-16 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB5685 40474d5f5109669e35c622bd4fc07f4c 265 Pfam PF04476 Putative methanogenic enzyme for methanofuran 32 256 2.6E-57 T 11-11-2016 IPR007565 (5-formylfuran-3-yl)methyl phosphate synthase KEGG: 00680+4.2.3.153|KEGG: 00902+4.2.3.15|MetaCyc: PWY-3041|MetaCyc: PWY-5423|MetaCyc: PWY-7410 RB5685 40474d5f5109669e35c622bd4fc07f4c 265 PIRSF PIRSF015957 30 263 3.9E-30 T 11-11-2016 IPR007565 (5-formylfuran-3-yl)methyl phosphate synthase KEGG: 00680+4.2.3.153|KEGG: 00902+4.2.3.15|MetaCyc: PWY-3041|MetaCyc: PWY-5423|MetaCyc: PWY-7410 RB9437 b59d4f8954ba4a5f3a906e9d07fa26c6 209 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 204 4.7E-16 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9437 b59d4f8954ba4a5f3a906e9d07fa26c6 209 SUPERFAMILY SSF88946 16 103 7.65E-18 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9437 b59d4f8954ba4a5f3a906e9d07fa26c6 209 Pfam PF04542 Sigma-70 region 2 32 101 1.8E-12 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB9437 b59d4f8954ba4a5f3a906e9d07fa26c6 209 Gene3D G3DSA:1.10.1740.10 17 106 8.2E-19 T 11-11-2016 RB10175 4c9ec26ae998ec55286c418bb4667d8f 375 Gene3D G3DSA:3.40.50.450 76 363 9.3E-72 T 11-11-2016 RB10175 4c9ec26ae998ec55286c418bb4667d8f 375 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 100 276 3.7E-28 T 11-11-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RB10175 4c9ec26ae998ec55286c418bb4667d8f 375 Pfam PF03641 Possible lysine decarboxylase 142 275 3.1E-26 T 11-11-2016 IPR031100 LOG family RB10175 4c9ec26ae998ec55286c418bb4667d8f 375 SUPERFAMILY SSF102405 80 276 5.19E-47 T 11-11-2016 RB5243 6ec93ce55e78e139874d24e4e08458c4 332 Pfam PF00326 Prolyl oligopeptidase family 257 307 1.8E-7 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB5243 6ec93ce55e78e139874d24e4e08458c4 332 Gene3D G3DSA:3.40.50.1820 93 325 1.6E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5243 6ec93ce55e78e139874d24e4e08458c4 332 SUPERFAMILY SSF53474 55 325 1.16E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6668 504461d432e6d8d5c59bf04b744156e3 686 SUPERFAMILY SSF117892 65 190 1.44E-10 T 11-11-2016 IPR001107 Band 7 domain RB12638 8a0f95ba65a2254ed54ea79ddde1d747 348 SUPERFAMILY SSF51735 1 120 8.27E-12 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12638 8a0f95ba65a2254ed54ea79ddde1d747 348 Gene3D G3DSA:1.10.1040.10 186 328 8.7E-14 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RB12638 8a0f95ba65a2254ed54ea79ddde1d747 348 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 178 325 2.7E-21 T 11-11-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 RB12638 8a0f95ba65a2254ed54ea79ddde1d747 348 Gene3D G3DSA:3.40.50.720 1 185 1.2E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12638 8a0f95ba65a2254ed54ea79ddde1d747 348 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 150 3.5E-25 T 11-11-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 RB12638 8a0f95ba65a2254ed54ea79ddde1d747 348 SUPERFAMILY SSF48179 178 325 4.08E-12 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB12509 9e29c508e796b391dae4526a564399e7 235 SUPERFAMILY SSF55874 138 225 5.61E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12509 9e29c508e796b391dae4526a564399e7 235 Gene3D G3DSA:3.30.565.10 136 224 8.5E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12509 9e29c508e796b391dae4526a564399e7 235 Gene3D G3DSA:3.30.565.10 65 92 8.5E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8873 95ae550976523b324ab4472dc375cdde 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 598 2.0E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB8873 95ae550976523b324ab4472dc375cdde 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 2.0E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB8873 95ae550976523b324ab4472dc375cdde 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 2.0E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB8873 95ae550976523b324ab4472dc375cdde 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 617 2.0E-17 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB8873 95ae550976523b324ab4472dc375cdde 801 Pfam PF08447 PAS fold 279 353 1.6E-15 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 RB8873 95ae550976523b324ab4472dc375cdde 801 Pfam PF00072 Response regulator receiver domain 652 766 2.0E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB8873 95ae550976523b324ab4472dc375cdde 801 Gene3D G3DSA:3.40.50.2300 650 771 3.5E-36 T 11-11-2016 RB8873 95ae550976523b324ab4472dc375cdde 801 SUPERFAMILY SSF52172 650 772 5.12E-34 T 11-11-2016 IPR011006 CheY-like superfamily RB8873 95ae550976523b324ab4472dc375cdde 801 SUPERFAMILY SSF47384 381 459 3.14E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB8873 95ae550976523b324ab4472dc375cdde 801 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 254 380 2.5E-12 T 11-11-2016 IPR000014 PAS domain RB8873 95ae550976523b324ab4472dc375cdde 801 SMART SM00388 393 458 4.5E-24 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB8873 95ae550976523b324ab4472dc375cdde 801 Pfam PF05227 CHASE3 domain 72 204 4.2E-28 T 11-11-2016 IPR007891 CHASE3 RB8873 95ae550976523b324ab4472dc375cdde 801 Gene3D G3DSA:3.30.565.10 459 621 1.9E-48 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8873 95ae550976523b324ab4472dc375cdde 801 Gene3D G3DSA:3.30.450.20 254 399 4.2E-27 T 11-11-2016 RB8873 95ae550976523b324ab4472dc375cdde 801 Gene3D G3DSA:1.10.287.130 400 454 2.7E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB8873 95ae550976523b324ab4472dc375cdde 801 SUPERFAMILY SSF55785 260 375 4.19E-16 T 11-11-2016 IPR000014 PAS domain RB8873 95ae550976523b324ab4472dc375cdde 801 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 505 618 4.0E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8873 95ae550976523b324ab4472dc375cdde 801 SUPERFAMILY SSF55874 447 623 1.44E-49 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8873 95ae550976523b324ab4472dc375cdde 801 Pfam PF00512 His Kinase A (phospho-acceptor) domain 393 458 4.4E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RB8873 95ae550976523b324ab4472dc375cdde 801 SMART SM00387 505 620 1.1E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8873 95ae550976523b324ab4472dc375cdde 801 SMART SM00448 650 766 5.3E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB1204 996614847c4c8fb32f8270c3c771b1df 90 Pfam PF07621 Protein of unknown function (DUF1582) 10 36 2.7E-6 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB6524 5f4e8fb2eb4a09b818f9dff29ede69c5 177 Gene3D G3DSA:3.40.50.2020 2 173 6.8E-60 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB6524 5f4e8fb2eb4a09b818f9dff29ede69c5 177 Pfam PF00156 Phosphoribosyl transferase domain 9 153 8.9E-23 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RB6524 5f4e8fb2eb4a09b818f9dff29ede69c5 177 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 4 167 2.0E-46 T 11-11-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 RB6524 5f4e8fb2eb4a09b818f9dff29ede69c5 177 SUPERFAMILY SSF53271 4 172 1.84E-48 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB9794 f7fc04c1738327e79f5b63ab2457acbe 105 SUPERFAMILY SSF54913 6 104 3.81E-26 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RB9794 f7fc04c1738327e79f5b63ab2457acbe 105 Pfam PF00543 Nitrogen regulatory protein P-II 10 104 4.7E-24 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB9794 f7fc04c1738327e79f5b63ab2457acbe 105 SMART SM00938 9 105 1.3E-17 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB9794 f7fc04c1738327e79f5b63ab2457acbe 105 Gene3D G3DSA:3.30.70.120 6 105 1.4E-27 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RB9794 f7fc04c1738327e79f5b63ab2457acbe 105 PRINTS PR00340 P-II protein signature 88 105 2.5E-21 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB9794 f7fc04c1738327e79f5b63ab2457acbe 105 PRINTS PR00340 P-II protein signature 7 22 2.5E-21 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB9794 f7fc04c1738327e79f5b63ab2457acbe 105 PRINTS PR00340 P-II protein signature 57 80 2.5E-21 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB9794 f7fc04c1738327e79f5b63ab2457acbe 105 PRINTS PR00340 P-II protein signature 28 46 2.5E-21 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RB5821 fb4425a7f663b13e22f6461764f1c6d2 458 Pfam PF07690 Major Facilitator Superfamily 45 406 1.0E-15 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB5821 fb4425a7f663b13e22f6461764f1c6d2 458 Gene3D G3DSA:1.20.1250.20 264 450 5.6E-6 T 11-11-2016 RB5821 fb4425a7f663b13e22f6461764f1c6d2 458 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 37 443 6.1E-154 T 11-11-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 RB5821 fb4425a7f663b13e22f6461764f1c6d2 458 Gene3D G3DSA:1.20.1250.20 41 248 8.2E-13 T 11-11-2016 RB5821 fb4425a7f663b13e22f6461764f1c6d2 458 SUPERFAMILY SSF103473 27 450 4.97E-32 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB7557 f9636e17cfb46b9803d011ebca4adb15 327 SMART SM00327 146 322 1.1E-27 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7557 f9636e17cfb46b9803d011ebca4adb15 327 SUPERFAMILY SSF53300 118 317 9.49E-37 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7557 f9636e17cfb46b9803d011ebca4adb15 327 Gene3D G3DSA:3.40.50.410 146 318 2.1E-29 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7557 f9636e17cfb46b9803d011ebca4adb15 327 Pfam PF00092 von Willebrand factor type A domain 148 315 2.5E-21 T 11-11-2016 IPR002035 von Willebrand factor, type A RB7557 f9636e17cfb46b9803d011ebca4adb15 327 PRINTS PR00453 Von Willebrand factor type A domain signature 186 200 5.4E-5 T 11-11-2016 RB7557 f9636e17cfb46b9803d011ebca4adb15 327 PRINTS PR00453 Von Willebrand factor type A domain signature 147 164 5.4E-5 T 11-11-2016 RB7557 f9636e17cfb46b9803d011ebca4adb15 327 PRINTS PR00453 Von Willebrand factor type A domain signature 247 255 5.4E-5 T 11-11-2016 RB7557 f9636e17cfb46b9803d011ebca4adb15 327 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 2 45 1.2E-6 T 11-11-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal RB140 9d0171aadce1c873b9b6cee1697887e8 987 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 154 177 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB140 9d0171aadce1c873b9b6cee1697887e8 987 Gene3D G3DSA:1.25.40.10 697 847 7.2E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB140 9d0171aadce1c873b9b6cee1697887e8 987 Pfam PF00069 Protein kinase domain 148 453 5.8E-42 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB140 9d0171aadce1c873b9b6cee1697887e8 987 SUPERFAMILY SSF56112 314 454 3.96E-68 T 11-11-2016 IPR011009 Protein kinase-like domain RB140 9d0171aadce1c873b9b6cee1697887e8 987 SUPERFAMILY SSF56112 140 285 3.96E-68 T 11-11-2016 IPR011009 Protein kinase-like domain RB140 9d0171aadce1c873b9b6cee1697887e8 987 Gene3D G3DSA:1.10.510.10 212 453 3.0E-44 T 11-11-2016 RB140 9d0171aadce1c873b9b6cee1697887e8 987 SUPERFAMILY SSF48452 697 847 6.15E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB140 9d0171aadce1c873b9b6cee1697887e8 987 SMART SM00220 148 456 4.2E-57 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB140 9d0171aadce1c873b9b6cee1697887e8 987 Gene3D G3DSA:3.30.200.20 145 211 4.0E-24 T 11-11-2016 RB140 9d0171aadce1c873b9b6cee1697887e8 987 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 269 281 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB2202 4ed3382f59d15c1748c3ced4e96d7ce6 353 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 30 322 3.7E-68 T 11-11-2016 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RB2202 4ed3382f59d15c1748c3ced4e96d7ce6 353 Gene3D G3DSA:3.60.60.10 30 345 3.9E-86 T 11-11-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 Reactome: R-HSA-1660662 RB2202 4ed3382f59d15c1748c3ced4e96d7ce6 353 SUPERFAMILY SSF56235 30 336 8.49E-82 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RB12566 b833fdfa5ecd3ed31c21707ada3b9536 495 Pfam PF07394 Protein of unknown function (DUF1501) 61 494 4.3E-147 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB12566 b833fdfa5ecd3ed31c21707ada3b9536 495 Gene3D G3DSA:3.40.720.10 371 479 1.5E-7 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12566 b833fdfa5ecd3ed31c21707ada3b9536 495 SUPERFAMILY SSF53649 318 483 7.63E-25 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6210 0071e9cb8e98172646a64c111e0699a7 214 PIRSF PIRSF004857 11 214 4.8E-74 T 11-11-2016 IPR011375 MfnE family RB6210 0071e9cb8e98172646a64c111e0699a7 214 SUPERFAMILY SSF53633 9 171 1.82E-11 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase RB3242 1fd3e394650594f7caee0188f108ea0e 439 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 82 426 4.2E-31 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB3242 1fd3e394650594f7caee0188f108ea0e 439 SUPERFAMILY SSF56219 78 434 2.3E-21 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 Pfam PF13229 Right handed beta helix region 415 569 7.6E-14 T 11-11-2016 RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 Gene3D G3DSA:2.160.20.10 351 382 4.1E-27 T 11-11-2016 IPR012334 Pectin lyase fold RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 Gene3D G3DSA:2.160.20.10 444 668 4.1E-27 T 11-11-2016 IPR012334 Pectin lyase fold RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 Gene3D G3DSA:2.160.20.10 46 162 4.1E-27 T 11-11-2016 IPR012334 Pectin lyase fold RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SUPERFAMILY SSF51126 35 137 7.86E-39 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SUPERFAMILY SSF51126 633 663 7.86E-39 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SUPERFAMILY SSF51126 305 578 7.86E-39 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SMART SM00710 445 466 1100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SMART SM00710 417 444 870.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SMART SM00710 506 542 890.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SMART SM00710 558 615 6700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SMART SM00710 476 504 220.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB4444 af3cdf3726eb9773805f4e77fff7d8b5 703 SMART SM00710 360 382 350.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7376 5a258f980798d1878802a915232b99d8 210 Pfam PF11736 Protein of unknown function (DUF3299) 106 184 1.2E-5 T 11-11-2016 IPR021727 Protein of unknown function DUF3299 RB10979 72e81cf42caa78723676e1c45bbaa17c 152 SUPERFAMILY SSF109854 28 148 2.56E-5 T 11-11-2016 RB10979 72e81cf42caa78723676e1c45bbaa17c 152 Pfam PF07606 Protein of unknown function (DUF1569) 1 151 3.4E-58 T 11-11-2016 IPR011463 Protein of unknown function DUF1569 RB11550 8ff8140b409796565bf7459f4eaf9740 201 Pfam PF00881 Nitroreductase family 8 177 2.1E-28 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 RB11550 8ff8140b409796565bf7459f4eaf9740 201 Gene3D G3DSA:3.40.109.10 1 196 2.1E-49 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RB11550 8ff8140b409796565bf7459f4eaf9740 201 SUPERFAMILY SSF55469 1 192 1.31E-49 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RB10799 9ae275f7b930c15a150b3d54e4dd5161 855 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 2 81 4.9E-27 T 11-11-2016 IPR011933 Double transmembrane domain RB10799 9ae275f7b930c15a150b3d54e4dd5161 855 Pfam PF07584 Aerotolerance regulator N-terminal 4 76 4.9E-18 T 11-11-2016 IPR024163 Aerotolerance regulator, N-terminal RB10799 9ae275f7b930c15a150b3d54e4dd5161 855 SUPERFAMILY SSF52317 408 679 2.43E-7 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9083 a1b42b527971289484dd0650f0ca2cdd 189 Gene3D G3DSA:3.90.1140.10 5 189 1.7E-46 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RB9083 a1b42b527971289484dd0650f0ca2cdd 189 SUPERFAMILY SSF55144 4 189 2.44E-41 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RB9083 a1b42b527971289484dd0650f0ca2cdd 189 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 189 6.7E-53 T 11-11-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RB9083 a1b42b527971289484dd0650f0ca2cdd 189 Pfam PF02834 LigT like Phosphoesterase 10 93 8.8E-17 T 11-11-2016 IPR014051 Phosphoesterase, HXTX RB9083 a1b42b527971289484dd0650f0ca2cdd 189 Pfam PF02834 LigT like Phosphoesterase 98 181 3.3E-12 T 11-11-2016 IPR014051 Phosphoesterase, HXTX RB9083 a1b42b527971289484dd0650f0ca2cdd 189 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 189 23.705 T 11-11-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RB8472 ec8cb643dd81166ff41fcde499390b84 484 Pfam PF00474 Sodium:solute symporter family 31 435 1.3E-40 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB12432 425bc67ed79526e9ce4be40d5a9691e3 554 ProSitePatterns PS00149 Sulfatases signature 2. 153 163 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB12432 425bc67ed79526e9ce4be40d5a9691e3 554 Pfam PF00884 Sulfatase 58 428 1.1E-62 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB12432 425bc67ed79526e9ce4be40d5a9691e3 554 Gene3D G3DSA:3.40.720.10 56 449 3.8E-102 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12432 425bc67ed79526e9ce4be40d5a9691e3 554 SUPERFAMILY SSF53649 55 544 1.22E-112 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB12432 425bc67ed79526e9ce4be40d5a9691e3 554 ProSitePatterns PS00523 Sulfatases signature 1. 105 117 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB12432 425bc67ed79526e9ce4be40d5a9691e3 554 Gene3D G3DSA:3.30.1120.10 462 518 4.2E-14 T 11-11-2016 RB12428 85f6904e85a49c51546c3838c7366f4c 322 SUPERFAMILY SSF48452 133 303 1.3E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12428 85f6904e85a49c51546c3838c7366f4c 322 Pfam PF13432 Tetratricopeptide repeat 137 199 1.8E-6 T 11-11-2016 RB12428 85f6904e85a49c51546c3838c7366f4c 322 Gene3D G3DSA:1.25.40.10 111 296 8.6E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13215 e35b89340623c3ec660677c690cf47ff 367 Pfam PF05569 BlaR1 peptidase M56 79 251 1.5E-16 T 11-11-2016 IPR008756 Peptidase M56 RB1793 dedaa19324bc34f08407a32dd6c4fce2 854 Gene3D G3DSA:3.40.50.1820 486 522 6.2E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1793 dedaa19324bc34f08407a32dd6c4fce2 854 Gene3D G3DSA:3.40.50.1820 567 709 6.2E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1793 dedaa19324bc34f08407a32dd6c4fce2 854 SUPERFAMILY SSF53474 486 533 6.83E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1793 dedaa19324bc34f08407a32dd6c4fce2 854 SUPERFAMILY SSF53474 574 722 6.83E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB343 8e09f1b00fcc38d76c25a676db6ddebe 244 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 227 9.4E-8 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB343 8e09f1b00fcc38d76c25a676db6ddebe 244 Gene3D G3DSA:3.40.50.1110 41 237 2.2E-8 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB343 8e09f1b00fcc38d76c25a676db6ddebe 244 SUPERFAMILY SSF52266 41 237 3.66E-10 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6151 8db0c753b8a2df0a975f116ed104250f 248 Pfam PF09844 Uncharacterized conserved protein (COG2071) 13 210 4.4E-10 T 11-11-2016 IPR018644 Protein of unknown function DUF2071 RB8816 a9935390293c13b2505bbc8fc7f6a3d6 251 Pfam PF04542 Sigma-70 region 2 54 120 8.4E-14 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8816 a9935390293c13b2505bbc8fc7f6a3d6 251 Gene3D G3DSA:1.10.10.10 147 210 5.3E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8816 a9935390293c13b2505bbc8fc7f6a3d6 251 SUPERFAMILY SSF88946 32 133 1.18E-24 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8816 a9935390293c13b2505bbc8fc7f6a3d6 251 SUPERFAMILY SSF88659 140 208 5.05E-9 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB8816 a9935390293c13b2505bbc8fc7f6a3d6 251 Gene3D G3DSA:1.10.1740.10 34 146 1.7E-25 T 11-11-2016 RB8816 a9935390293c13b2505bbc8fc7f6a3d6 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 206 1.9E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB7476 bbe48a0b0c6431fc024ada187e8cfece 390 SUPERFAMILY SSF52317 173 315 1.33E-26 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB7476 bbe48a0b0c6431fc024ada187e8cfece 390 SUPERFAMILY SSF52317 38 142 1.33E-26 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB7476 bbe48a0b0c6431fc024ada187e8cfece 390 Gene3D G3DSA:3.40.50.880 50 303 1.3E-10 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB3208 aaf535ec75639d83a040a4a2da719537 95 Pfam PF03994 Domain of Unknown Function (DUF350) 40 93 4.4E-12 T 11-11-2016 IPR007140 Protein of unknown function DUF350 RB6254 e039dd43c51e679febb2f3197c1f8cb1 356 Pfam PF00483 Nucleotidyl transferase 4 283 3.2E-45 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RB6254 e039dd43c51e679febb2f3197c1f8cb1 356 SUPERFAMILY SSF159283 283 348 4.84E-15 T 11-11-2016 RB6254 e039dd43c51e679febb2f3197c1f8cb1 356 Gene3D G3DSA:3.90.550.10 2 270 1.2E-83 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6254 e039dd43c51e679febb2f3197c1f8cb1 356 SUPERFAMILY SSF53448 1 280 8.44E-63 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB3773 585ecc9e9b4a25801f0331c74816def3 466 Pfam PF07005 Putative sugar-binding N-terminal domain 35 272 8.5E-54 T 11-11-2016 IPR010737 Putative sugar-binding, N-terminal domain RB3773 585ecc9e9b4a25801f0331c74816def3 466 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 296 457 4.3E-41 T 11-11-2016 IPR031475 Putative nucleotide-binding C-terminal domain RB3773 585ecc9e9b4a25801f0331c74816def3 466 SUPERFAMILY SSF142764 35 464 1.7E-67 T 11-11-2016 RB4597 e68b002ae9bfdb1839104704afe6a9a7 343 Pfam PF03547 Membrane transport protein 192 334 3.1E-10 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 RB4597 e68b002ae9bfdb1839104704afe6a9a7 343 Pfam PF03547 Membrane transport protein 17 175 1.6E-9 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 RB2469 6c652205a16bce3da28e3c5fd3958eaf 255 SUPERFAMILY SSF53448 8 212 2.81E-47 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB2469 6c652205a16bce3da28e3c5fd3958eaf 255 Pfam PF00535 Glycosyl transferase family 2 10 148 2.1E-21 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB2469 6c652205a16bce3da28e3c5fd3958eaf 255 Gene3D G3DSA:3.90.550.10 7 218 1.4E-44 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB12406 a7fe71f414260e02bbf7381943bf8841 516 Pfam PF03825 Nucleoside H+ symporter 23 110 6.0E-16 T 11-11-2016 RB12406 a7fe71f414260e02bbf7381943bf8841 516 Pfam PF03825 Nucleoside H+ symporter 134 397 3.4E-73 T 11-11-2016 RB12406 a7fe71f414260e02bbf7381943bf8841 516 Gene3D G3DSA:1.20.1250.20 23 101 1.2E-6 T 11-11-2016 RB12406 a7fe71f414260e02bbf7381943bf8841 516 Gene3D G3DSA:1.20.1250.20 243 406 5.7E-20 T 11-11-2016 RB12406 a7fe71f414260e02bbf7381943bf8841 516 Gene3D G3DSA:1.20.1250.20 138 230 1.2E-6 T 11-11-2016 RB12406 a7fe71f414260e02bbf7381943bf8841 516 Gene3D G3DSA:1.20.1250.20 468 494 5.7E-20 T 11-11-2016 RB12406 a7fe71f414260e02bbf7381943bf8841 516 SUPERFAMILY SSF103473 470 499 8.63E-24 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB12406 a7fe71f414260e02bbf7381943bf8841 516 SUPERFAMILY SSF103473 18 104 8.63E-24 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB12406 a7fe71f414260e02bbf7381943bf8841 516 SUPERFAMILY SSF103473 138 405 8.63E-24 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB12048 3caf72727544931dc101119f14810703 920 SUPERFAMILY SSF48239 890 910 3.14E-31 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB12048 3caf72727544931dc101119f14810703 920 SUPERFAMILY SSF48239 565 817 3.14E-31 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB12048 3caf72727544931dc101119f14810703 920 Gene3D G3DSA:1.50.10.20 571 813 1.1E-25 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB12048 3caf72727544931dc101119f14810703 920 Gene3D G3DSA:1.50.10.20 860 907 1.1E-25 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11505 3a3f97be04af0f134db5436b2ce52f71 199 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 30 192 1.5E-47 T 11-11-2016 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 RB11505 3a3f97be04af0f134db5436b2ce52f71 199 SUPERFAMILY SSF49785 28 196 2.47E-26 T 11-11-2016 IPR008979 Galactose-binding domain-like RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 SMART SM00382 313 452 1.6E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 SUPERFAMILY SSF52540 274 488 4.37E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 317 425 3.0E-16 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 PRINTS PR00819 CbxX/CfqX superfamily signature 496 508 1.3E-48 T 11-11-2016 IPR000641 CbxX/CfqX GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 PRINTS PR00819 CbxX/CfqX superfamily signature 368 387 1.3E-48 T 11-11-2016 IPR000641 CbxX/CfqX GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 PRINTS PR00819 CbxX/CfqX superfamily signature 276 290 1.3E-48 T 11-11-2016 IPR000641 CbxX/CfqX GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 PRINTS PR00819 CbxX/CfqX superfamily signature 399 411 1.3E-48 T 11-11-2016 IPR000641 CbxX/CfqX GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 PRINTS PR00819 CbxX/CfqX superfamily signature 316 331 1.3E-48 T 11-11-2016 IPR000641 CbxX/CfqX GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 PRINTS PR00819 CbxX/CfqX superfamily signature 420 437 1.3E-48 T 11-11-2016 IPR000641 CbxX/CfqX GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 PRINTS PR00819 CbxX/CfqX superfamily signature 437 456 1.3E-48 T 11-11-2016 IPR000641 CbxX/CfqX GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 PRINTS PR00819 CbxX/CfqX superfamily signature 354 368 1.3E-48 T 11-11-2016 IPR000641 CbxX/CfqX GO:0005524 RB8843 9b8b40edf2092433ac9109c3d5f10b4b 610 Gene3D G3DSA:3.40.50.300 275 466 5.7E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11223 9393035d15032700f1fb8a360d1f2372 120 SUPERFAMILY SSF46785 29 115 3.53E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11223 9393035d15032700f1fb8a360d1f2372 120 SMART SM00418 37 115 1.1E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB11223 9393035d15032700f1fb8a360d1f2372 120 Gene3D G3DSA:1.10.10.10 19 115 4.5E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11223 9393035d15032700f1fb8a360d1f2372 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 86 101 2.9E-10 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB11223 9393035d15032700f1fb8a360d1f2372 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 2.9E-10 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB11223 9393035d15032700f1fb8a360d1f2372 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 2.9E-10 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB11223 9393035d15032700f1fb8a360d1f2372 120 Pfam PF12840 Helix-turn-helix domain 38 95 2.1E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8301 54c56587c79f4bc7b556c56ebab9ed75 342 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 43 200 3.2E-11 T 11-11-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RB2502 45d5dd3a4bfef3984257d9a9e732a12e 212 SUPERFAMILY SSF51161 80 210 7.76E-34 T 11-11-2016 IPR011004 Trimeric LpxA-like RB2502 45d5dd3a4bfef3984257d9a9e732a12e 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 192 3.3E-7 T 11-11-2016 IPR001451 Hexapeptide repeat RB2502 45d5dd3a4bfef3984257d9a9e732a12e 212 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 88 111 0.066 T 11-11-2016 IPR001451 Hexapeptide repeat RB2502 45d5dd3a4bfef3984257d9a9e732a12e 212 Gene3D G3DSA:2.160.10.10 66 210 9.2E-38 T 11-11-2016 RB7135 276ee576d42669ddd7fac1505bce0f0d 296 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 52 281 2.1E-72 T 11-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RB7135 276ee576d42669ddd7fac1505bce0f0d 296 Pfam PF02405 Permease MlaE 72 279 1.6E-76 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RB9610 f8c3d13a38aebf06010180ffe58666af 501 SUPERFAMILY SSF51735 10 297 9.05E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9610 f8c3d13a38aebf06010180ffe58666af 501 Gene3D G3DSA:3.40.50.720 10 276 1.6E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain RB9610 f8c3d13a38aebf06010180ffe58666af 501 Pfam PF07993 Male sterility protein 12 258 1.4E-42 T 11-11-2016 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 RB7443 76333125c1122853528f30ce687f85af 143 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 97 136 2.5E-6 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RB7443 76333125c1122853528f30ce687f85af 143 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 2.9E-36 T 11-11-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 RB7443 76333125c1122853528f30ce687f85af 143 Pfam PF00460 Flagella basal body rod protein 9 33 4.4E-5 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RB6236 eee158787e3e01b4f7b44ddf26f6ec7e 341 Pfam PF00005 ABC transporter 57 198 3.7E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB6236 eee158787e3e01b4f7b44ddf26f6ec7e 341 Gene3D G3DSA:3.40.50.300 27 262 7.5E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6236 eee158787e3e01b4f7b44ddf26f6ec7e 341 SUPERFAMILY SSF52540 34 262 3.94E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6236 eee158787e3e01b4f7b44ddf26f6ec7e 341 SMART SM00382 66 264 1.1E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3355 f2b0aa4933a17fb432807ce45aa3d47d 721 Gene3D G3DSA:1.10.760.10 616 721 6.9E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3355 f2b0aa4933a17fb432807ce45aa3d47d 721 Gene3D G3DSA:2.130.10.10 81 384 5.2E-17 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB3355 f2b0aa4933a17fb432807ce45aa3d47d 721 Gene3D G3DSA:1.10.760.10 508 612 1.1E-13 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3355 f2b0aa4933a17fb432807ce45aa3d47d 721 SUPERFAMILY SSF46626 496 612 2.7E-15 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3355 f2b0aa4933a17fb432807ce45aa3d47d 721 SUPERFAMILY SSF46626 613 721 7.7E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB3355 f2b0aa4933a17fb432807ce45aa3d47d 721 Pfam PF03150 Di-haem cytochrome c peroxidase 512 564 1.5E-5 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RB3355 f2b0aa4933a17fb432807ce45aa3d47d 721 SUPERFAMILY SSF50969 79 386 1.02E-16 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RB783 1b7856b4ca04c4ff06d534feee74a9d4 409 Pfam PF01758 Sodium Bile acid symporter family 64 297 1.1E-51 T 11-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 RB783 1b7856b4ca04c4ff06d534feee74a9d4 409 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 15 385 1.4E-112 T 11-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 RB783 1b7856b4ca04c4ff06d534feee74a9d4 409 PIRSF PIRSF005508 1 403 2.8E-116 T 11-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 RB10258 376721088f6f95bd9fb082871a8b5851 289 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 13 284 4.2E-43 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB10258 376721088f6f95bd9fb082871a8b5851 289 Gene3D G3DSA:3.40.1210.10 13 285 2.4E-55 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB10258 376721088f6f95bd9fb082871a8b5851 289 Pfam PF01975 Survival protein SurE 14 202 3.0E-41 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB10258 376721088f6f95bd9fb082871a8b5851 289 SUPERFAMILY SSF64167 14 285 1.44E-51 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB12601 3faf2937a670d52afb3b596e03315a4d 277 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 67 241 1.0E-53 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RB12601 3faf2937a670d52afb3b596e03315a4d 277 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 63 244 1.9E-44 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RB2688 810f6c21685a2e5952e51455939f7d4d 1101 Pfam PF07635 Planctomycete cytochrome C 90 150 3.1E-20 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB2688 810f6c21685a2e5952e51455939f7d4d 1101 Pfam PF07587 Protein of unknown function (DUF1553) 790 1044 1.1E-85 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB2688 810f6c21685a2e5952e51455939f7d4d 1101 SUPERFAMILY SSF46626 56 174 4.72E-5 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB2688 810f6c21685a2e5952e51455939f7d4d 1101 Pfam PF07583 Protein of unknown function (DUF1549) 200 409 2.5E-79 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB6716 99ada500f34e6e819e38e5a97c37c1e7 468 PRINTS PR00758 Arsenical pump membrane protein signature 301 325 2.2E-8 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RB6716 99ada500f34e6e819e38e5a97c37c1e7 468 PRINTS PR00758 Arsenical pump membrane protein signature 423 447 2.2E-8 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RB6716 99ada500f34e6e819e38e5a97c37c1e7 468 PRINTS PR00758 Arsenical pump membrane protein signature 346 368 2.2E-8 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RB6716 99ada500f34e6e819e38e5a97c37c1e7 468 PRINTS PR00758 Arsenical pump membrane protein signature 195 218 2.2E-8 T 11-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RB6716 99ada500f34e6e819e38e5a97c37c1e7 468 Pfam PF03600 Citrate transporter 31 388 2.3E-32 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 RB3252 322bad6de4647a58ba0c1691806e8938 327 Pfam PF12679 ABC-2 family transporter protein 86 323 1.2E-11 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 RB6802 104c2029464e0c1628110e188afb23df 286 Gene3D G3DSA:3.40.50.720 25 278 7.1E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6802 104c2029464e0c1628110e188afb23df 286 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 30 218 1.5E-4 T 11-11-2016 RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 220 3.9E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 108 119 3.9E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 201 3.9E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 258 3.9E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 172 3.9E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 3.9E-30 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6802 104c2029464e0c1628110e188afb23df 286 SUPERFAMILY SSF51735 28 276 5.59E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain RB6802 104c2029464e0c1628110e188afb23df 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 38 275 2.2E-46 T 11-11-2016 RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 201 7.4E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 108 119 7.4E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB6802 104c2029464e0c1628110e188afb23df 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 170 7.4E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RB11730 f1823027dad736722963a67b7018a593 264 Pfam PF05742 Transport and Golgi organisation 2 6 215 1.6E-23 T 11-11-2016 IPR008551 Transport and Golgi organisation protein 2 RB7444 3fc86181063c35733407319de4f9050c 139 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 57 139 1.2E-14 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RB7444 3fc86181063c35733407319de4f9050c 139 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 119 4.8E-6 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RB7444 3fc86181063c35733407319de4f9050c 139 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 124 137 4.8E-6 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RB7444 3fc86181063c35733407319de4f9050c 139 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 4.8E-6 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RB7444 3fc86181063c35733407319de4f9050c 139 Pfam PF02049 Flagellar hook-basal body complex protein FliE 56 139 1.0E-20 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RB7444 3fc86181063c35733407319de4f9050c 139 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 25 139 15.534 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 RB8199 034f8b2d44adcfa23d7a11223e3e1ebd 439 Pfam PF07596 Protein of unknown function (DUF1559) 63 397 6.9E-68 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8199 034f8b2d44adcfa23d7a11223e3e1ebd 439 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 33 57 6.5E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8199 034f8b2d44adcfa23d7a11223e3e1ebd 439 SUPERFAMILY SSF54523 39 191 1.73E-28 T 11-11-2016 RB8199 034f8b2d44adcfa23d7a11223e3e1ebd 439 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 36 58 1.5E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8199 034f8b2d44adcfa23d7a11223e3e1ebd 439 Gene3D G3DSA:3.30.700.10 39 101 3.5E-7 T 11-11-2016 RB8199 034f8b2d44adcfa23d7a11223e3e1ebd 439 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 37 57 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8280 e1bd4fbe84e04293563286406b8bb252 129 TIGRFAM TIGR03698 clan_AA_DTGF: clan AA aspartic protease, AF_0612 family 19 120 1.7E-29 T 11-11-2016 IPR022274 Peptidase aspartic, AF0612 RB4968 0f8b717a46b9454fd3308cf49b53bb9e 331 PRINTS PR00412 Epoxide hydrolase signature 128 141 6.0E-24 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB4968 0f8b717a46b9454fd3308cf49b53bb9e 331 PRINTS PR00412 Epoxide hydrolase signature 48 66 6.0E-24 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB4968 0f8b717a46b9454fd3308cf49b53bb9e 331 PRINTS PR00412 Epoxide hydrolase signature 114 127 6.0E-24 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB4968 0f8b717a46b9454fd3308cf49b53bb9e 331 PRINTS PR00412 Epoxide hydrolase signature 295 317 6.0E-24 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB4968 0f8b717a46b9454fd3308cf49b53bb9e 331 PRINTS PR00412 Epoxide hydrolase signature 68 83 6.0E-24 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB4968 0f8b717a46b9454fd3308cf49b53bb9e 331 SUPERFAMILY SSF53474 21 320 8.53E-72 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4968 0f8b717a46b9454fd3308cf49b53bb9e 331 Pfam PF00561 alpha/beta hydrolase fold 42 147 1.1E-22 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB4968 0f8b717a46b9454fd3308cf49b53bb9e 331 Gene3D G3DSA:3.40.50.1820 22 319 2.3E-77 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB12256 6d6a5467141961451a27603084f56fb3 248 SMART SM00014 114 227 3.5E-22 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB12256 6d6a5467141961451a27603084f56fb3 248 Gene3D G3DSA:1.20.144.10 49 235 6.7E-38 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB12256 6d6a5467141961451a27603084f56fb3 248 SUPERFAMILY SSF48317 36 241 9.55E-39 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB12256 6d6a5467141961451a27603084f56fb3 248 Pfam PF01569 PAP2 superfamily 117 232 2.4E-24 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RB5880 dff54d59c77903c2e82f6ed31f3d2c7f 132 SUPERFAMILY SSF54593 19 129 1.05E-15 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB5880 dff54d59c77903c2e82f6ed31f3d2c7f 132 Gene3D G3DSA:3.10.180.10 19 130 3.0E-13 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Pfam PF01368 DHH family 3 384 6.4E-25 T 11-11-2016 IPR001667 DDH domain RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Pfam PF00571 CBS domain 252 301 9.7E-5 T 11-11-2016 IPR000644 CBS domain RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Pfam PF00571 CBS domain 69 121 2.0E-9 T 11-11-2016 IPR000644 CBS domain RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 SMART SM01131 419 544 1.2E-36 T 11-11-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 SMART SM00116 75 123 0.005 T 11-11-2016 IPR000644 CBS domain RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 SMART SM00116 258 305 6.3 T 11-11-2016 IPR000644 CBS domain RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Gene3D G3DSA:3.40.1390.20 135 250 6.0E-22 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Gene3D G3DSA:3.90.1640.10 2 69 1.5E-55 T 11-11-2016 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Gene3D G3DSA:3.90.1640.10 308 424 1.5E-55 T 11-11-2016 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 SUPERFAMILY SSF54631 69 139 5.45E-21 T 11-11-2016 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 SUPERFAMILY SSF54631 228 301 5.45E-21 T 11-11-2016 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 SUPERFAMILY SSF75138 137 247 8.37E-19 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 SUPERFAMILY SSF64182 3 69 1.15E-63 T 11-11-2016 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 SUPERFAMILY SSF64182 306 541 1.15E-63 T 11-11-2016 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Gene3D G3DSA:3.10.580.10 251 301 2.3E-17 T 11-11-2016 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Gene3D G3DSA:3.10.580.10 70 130 2.3E-17 T 11-11-2016 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Pfam PF02833 DHHA2 domain 421 542 3.5E-15 T 11-11-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 RB7084 b09bf5577ed54dd5f2e1be5d9da40524 551 Pfam PF07085 DRTGG domain 142 247 2.2E-23 T 11-11-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RB9581 718e0e8bd8f0eaba058e1ac94bb17665 128 Gene3D G3DSA:1.10.10.10 6 123 3.0E-44 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9581 718e0e8bd8f0eaba058e1ac94bb17665 128 SUPERFAMILY SSF46785 12 120 1.95E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB9581 718e0e8bd8f0eaba058e1ac94bb17665 128 Pfam PF01638 HxlR-like helix-turn-helix 25 112 1.1E-32 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type RB10591 8dce529c3e64951c7d1a0343358cefe1 453 PIRSF PIRSF036484 46 449 3.6E-201 T 11-11-2016 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 RB10591 8dce529c3e64951c7d1a0343358cefe1 453 SUPERFAMILY SSF53784 47 445 6.41E-77 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB10591 8dce529c3e64951c7d1a0343358cefe1 453 Gene3D G3DSA:3.40.50.450 47 303 3.5E-55 T 11-11-2016 RB10591 8dce529c3e64951c7d1a0343358cefe1 453 Hamap MF_01977 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 47 444 64.115 T 11-11-2016 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 RB10591 8dce529c3e64951c7d1a0343358cefe1 453 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 157 173 1.1E-13 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB10591 8dce529c3e64951c7d1a0343358cefe1 453 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 229 245 1.1E-13 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB10591 8dce529c3e64951c7d1a0343358cefe1 453 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 190 207 1.1E-13 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB10591 8dce529c3e64951c7d1a0343358cefe1 453 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 53 72 1.1E-13 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB10591 8dce529c3e64951c7d1a0343358cefe1 453 Pfam PF00365 Phosphofructokinase 50 394 9.4E-39 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB39 fdec6801f3bbd1c842308c596e61e763 249 SUPERFAMILY SSF53098 104 247 9.86E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB39 fdec6801f3bbd1c842308c596e61e763 249 Gene3D G3DSA:3.30.420.10 106 247 5.1E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB39 fdec6801f3bbd1c842308c596e61e763 249 Pfam PF00665 Integrase core domain 105 209 3.2E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB5984 fe3d3022ce91c81adeb89342398a3ad8 506 SUPERFAMILY SSF53383 28 365 5.53E-30 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB5984 fe3d3022ce91c81adeb89342398a3ad8 506 Gene3D G3DSA:3.40.640.10 52 270 1.4E-16 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB5984 fe3d3022ce91c81adeb89342398a3ad8 506 Pfam PF00202 Aminotransferase class-III 145 364 4.2E-11 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RB3767 b1b21caad9c6b73f7535520370fe94d8 364 SUPERFAMILY SSF53659 2 353 6.48E-105 T 11-11-2016 RB3767 b1b21caad9c6b73f7535520370fe94d8 364 SMART SM01329 6 349 1.0E-145 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB3767 b1b21caad9c6b73f7535520370fe94d8 364 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 RB3767 b1b21caad9c6b73f7535520370fe94d8 364 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 349 1.5E-92 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB3767 b1b21caad9c6b73f7535520370fe94d8 364 Gene3D G3DSA:3.40.718.10 2 353 7.6E-108 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RB6982 052d0717f307c07bd77cc4c5ad9c9063 286 SMART SM00382 65 253 8.6E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6982 052d0717f307c07bd77cc4c5ad9c9063 286 SUPERFAMILY SSF52540 39 263 1.77E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6982 052d0717f307c07bd77cc4c5ad9c9063 286 Gene3D G3DSA:3.40.50.300 38 266 1.6E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6982 052d0717f307c07bd77cc4c5ad9c9063 286 Pfam PF00005 ABC transporter 56 204 5.3E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB6982 052d0717f307c07bd77cc4c5ad9c9063 286 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB373 93e777d4d4248a96dcf86be5aa395f42 332 SMART SM00382 69 251 1.7E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB373 93e777d4d4248a96dcf86be5aa395f42 332 SUPERFAMILY SSF52540 40 261 1.69E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB373 93e777d4d4248a96dcf86be5aa395f42 332 Pfam PF00005 ABC transporter 60 201 4.6E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB373 93e777d4d4248a96dcf86be5aa395f42 332 Gene3D G3DSA:3.40.50.300 38 251 1.6E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8221 9750681aba9f6d13ae6a0fae5dc6f02f 439 SUPERFAMILY SSF53383 11 435 1.32E-113 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB8221 9750681aba9f6d13ae6a0fae5dc6f02f 439 PIRSF PIRSF001434 1 438 2.7E-126 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB8221 9750681aba9f6d13ae6a0fae5dc6f02f 439 Gene3D G3DSA:3.90.1150.10 301 436 5.4E-51 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB8221 9750681aba9f6d13ae6a0fae5dc6f02f 439 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 434 2.3E-139 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB8221 9750681aba9f6d13ae6a0fae5dc6f02f 439 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 11 435 3.9E-211 T 11-11-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RB8221 9750681aba9f6d13ae6a0fae5dc6f02f 439 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 207 221 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RB8221 9750681aba9f6d13ae6a0fae5dc6f02f 439 Gene3D G3DSA:3.40.640.10 10 299 4.1E-109 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB807 5c8504cd7b56e743b56fd61a596fce40 392 Pfam PF13808 DDE_Tnp_1-associated 14 99 4.8E-30 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal RB807 5c8504cd7b56e743b56fd61a596fce40 392 Pfam PF01609 Transposase DDE domain 124 355 5.7E-13 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB4113 5c8504cd7b56e743b56fd61a596fce40 392 Pfam PF13808 DDE_Tnp_1-associated 14 99 4.8E-30 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal RB4113 5c8504cd7b56e743b56fd61a596fce40 392 Pfam PF01609 Transposase DDE domain 124 355 5.7E-13 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB2398 0d955c309bb46cd1304940c28ec4636c 294 Pfam PF09851 Short C-terminal domain 264 291 4.6E-8 T 11-11-2016 IPR018649 SHOCT domain RB3410 a77ef791b6e639aa91c64564ef34a5a9 274 Pfam PF08907 Domain of unknown function (DUF1853) 7 267 1.6E-51 T 11-11-2016 IPR015003 Protein of unknown function DUF1853 RB2552 e234966e7c4cbd39f5905da86d6b3588 346 Gene3D G3DSA:3.40.50.720 4 162 2.0E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2552 e234966e7c4cbd39f5905da86d6b3588 346 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 11-11-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RB2552 e234966e7c4cbd39f5905da86d6b3588 346 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 344 3.9E-116 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RB2552 e234966e7c4cbd39f5905da86d6b3588 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 145 2.7E-31 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RB2552 e234966e7c4cbd39f5905da86d6b3588 346 SUPERFAMILY SSF51735 5 181 7.04E-49 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2552 e234966e7c4cbd39f5905da86d6b3588 346 Gene3D G3DSA:3.30.360.10 163 319 2.6E-55 T 11-11-2016 RB2552 e234966e7c4cbd39f5905da86d6b3588 346 SUPERFAMILY SSF55347 154 319 1.09E-47 T 11-11-2016 RB2552 e234966e7c4cbd39f5905da86d6b3588 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 322 1.0E-16 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RB2552 e234966e7c4cbd39f5905da86d6b3588 346 SMART SM00859 7 146 4.9E-52 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RB2552 e234966e7c4cbd39f5905da86d6b3588 346 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 345 39.739 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RB13193 11287e97740b6be94b53a22f07dccfe0 328 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 124 247 2.8E-26 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB13193 11287e97740b6be94b53a22f07dccfe0 328 SUPERFAMILY SSF52540 79 319 8.39E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13193 11287e97740b6be94b53a22f07dccfe0 328 Gene3D G3DSA:3.40.50.300 82 264 1.8E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13193 11287e97740b6be94b53a22f07dccfe0 328 SMART SM00382 120 252 1.5E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain RB2988 aa5e13861ccdb8d1c2b93969ff20169f 481 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 255 480 7.7E-31 T 11-11-2016 IPR007184 Mannoside phosphorylase RB2988 aa5e13861ccdb8d1c2b93969ff20169f 481 SUPERFAMILY SSF75005 259 473 2.28E-57 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB2988 aa5e13861ccdb8d1c2b93969ff20169f 481 Gene3D G3DSA:2.115.10.20 238 480 4.8E-101 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB2988 aa5e13861ccdb8d1c2b93969ff20169f 481 Gene3D G3DSA:2.115.10.20 54 143 4.8E-101 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB13032 a8aadad613b69fd9a2199e43f211b70f 543 Pfam PF03773 Predicted permease 24 308 7.8E-21 T 11-11-2016 IPR005524 Predicted permease DUF318 RB13077 ca8967d233096ab0d53f2dee10d7f5d5 306 Pfam PF00482 Type II secretion system (T2SS), protein F 160 284 1.7E-16 T 11-11-2016 IPR018076 Type II secretion system F domain RB13071 234b9ad3b16e9be75ea751d2795082eb 402 Gene3D G3DSA:3.40.50.2300 25 126 4.6E-5 T 11-11-2016 RB13071 234b9ad3b16e9be75ea751d2795082eb 402 SUPERFAMILY SSF52540 132 372 1.06E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13071 234b9ad3b16e9be75ea751d2795082eb 402 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 135 339 2.6E-16 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RB13071 234b9ad3b16e9be75ea751d2795082eb 402 Gene3D G3DSA:3.40.50.300 131 370 6.5E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB13071 234b9ad3b16e9be75ea751d2795082eb 402 SUPERFAMILY SSF52172 26 126 1.42E-6 T 11-11-2016 IPR011006 CheY-like superfamily RB12946 c8264a6125d4b863adec983126dbd534 244 Pfam PF02151 UvrB/uvrC motif 214 240 7.6E-6 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB12946 c8264a6125d4b863adec983126dbd534 244 Gene3D G3DSA:4.10.860.10 213 239 8.1E-4 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB1250 84447599fe8e5acd02d3bb3756e6a84e 990 Pfam PF13346 ABC-2 family transporter protein 123 303 8.3E-9 T 11-11-2016 IPR025699 ABC-2 membrane transporter-like RB1250 84447599fe8e5acd02d3bb3756e6a84e 990 Pfam PF09822 ABC-type uncharacterized transport system 351 592 9.1E-31 T 11-11-2016 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 RB2140 a4eef8360b45e3b810eb9f879c9eb979 49 Pfam PF07640 QPP 14 48 6.3E-21 T 11-11-2016 IPR011507 QPP RB4233 a3df57b422b171dc11430398360155bd 969 Gene3D G3DSA:1.10.760.10 90 186 3.3E-4 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB4233 a3df57b422b171dc11430398360155bd 969 Pfam PF07587 Protein of unknown function (DUF1553) 630 889 4.1E-81 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB4233 a3df57b422b171dc11430398360155bd 969 Pfam PF07583 Protein of unknown function (DUF1549) 233 446 3.7E-78 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB4233 a3df57b422b171dc11430398360155bd 969 Pfam PF07635 Planctomycete cytochrome C 92 151 1.0E-13 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB1529 476a4c7a662483d353fa49bcfd7ac1d5 480 Pfam PF02310 B12 binding domain 68 183 3.7E-16 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RB1529 476a4c7a662483d353fa49bcfd7ac1d5 480 SMART SM00729 221 430 1.4E-10 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB1529 476a4c7a662483d353fa49bcfd7ac1d5 480 Gene3D G3DSA:3.80.30.20 221 434 8.3E-28 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB1529 476a4c7a662483d353fa49bcfd7ac1d5 480 Pfam PF04055 Radical SAM superfamily 226 384 9.0E-10 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB1529 476a4c7a662483d353fa49bcfd7ac1d5 480 SUPERFAMILY SSF102114 203 421 8.63E-24 T 11-11-2016 RB6375 3e958b6152011649f89a9ee541c56d04 297 Pfam PF14237 Domain of unknown function (DUF4339) 162 205 2.6E-8 T 11-11-2016 IPR025640 Domain of unknown function DUF4339 RB6375 3e958b6152011649f89a9ee541c56d04 297 SUPERFAMILY SSF55277 161 214 1.11E-9 T 11-11-2016 IPR003169 GYF domain GO:0005515 RB6375 3e958b6152011649f89a9ee541c56d04 297 Gene3D G3DSA:3.30.1490.40 162 209 5.5E-4 T 11-11-2016 IPR003169 GYF domain GO:0005515 RB7157 9bc20fae3d1c72ce085fdd0f7654e43e 413 SUPERFAMILY SSF52540 95 192 9.97E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7157 9bc20fae3d1c72ce085fdd0f7654e43e 413 SUPERFAMILY SSF52540 242 413 9.97E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7157 9bc20fae3d1c72ce085fdd0f7654e43e 413 Gene3D G3DSA:3.40.50.300 110 138 6.9E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7157 9bc20fae3d1c72ce085fdd0f7654e43e 413 Gene3D G3DSA:3.40.50.300 186 368 6.9E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7157 9bc20fae3d1c72ce085fdd0f7654e43e 413 Pfam PF13469 Sulfotransferase family 120 364 1.3E-41 T 11-11-2016 RB12679 670c7cae0648f911679deaa57d2bf312 339 Pfam PF02630 SCO1/SenC 69 165 8.7E-7 T 11-11-2016 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12679 670c7cae0648f911679deaa57d2bf312 339 Gene3D G3DSA:3.40.30.10 69 233 3.7E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12679 670c7cae0648f911679deaa57d2bf312 339 Gene3D G3DSA:3.40.30.10 23 32 3.7E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12679 670c7cae0648f911679deaa57d2bf312 339 SUPERFAMILY SSF52833 73 233 6.22E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold RB3716 b71d31975d26fa349c37dc23f18d2c71 139 Gene3D G3DSA:3.30.300.20 2 135 1.0E-51 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta RB3716 b71d31975d26fa349c37dc23f18d2c71 139 Pfam PF02566 OsmC-like protein 36 130 3.3E-16 T 11-11-2016 IPR003718 OsmC/Ohr family RB3716 b71d31975d26fa349c37dc23f18d2c71 139 SUPERFAMILY SSF82784 3 134 7.33E-30 T 11-11-2016 IPR003718 OsmC/Ohr family RB1629 8e3ff212349c42b265d7167936b3992a 357 SUPERFAMILY SSF53067 32 354 9.15E-60 T 11-11-2016 RB1629 8e3ff212349c42b265d7167936b3992a 357 Gene3D G3DSA:3.30.420.40 172 337 4.8E-40 T 11-11-2016 RB1629 8e3ff212349c42b265d7167936b3992a 357 Pfam PF00480 ROK family 33 354 2.5E-52 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RB1629 8e3ff212349c42b265d7167936b3992a 357 Gene3D G3DSA:3.30.420.40 27 171 8.7E-46 T 11-11-2016 RB8300 e85ca768ccd21c550c1422ca2f78bc82 181 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 37 181 34.431 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RB8300 e85ca768ccd21c550c1422ca2f78bc82 181 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 38 180 2.2E-52 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RB8300 e85ca768ccd21c550c1422ca2f78bc82 181 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 37 180 1.6E-55 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RB8300 e85ca768ccd21c550c1422ca2f78bc82 181 SUPERFAMILY SSF69500 37 180 1.44E-53 T 11-11-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RB8300 e85ca768ccd21c550c1422ca2f78bc82 181 Gene3D G3DSA:3.50.80.10 37 180 3.0E-56 T 11-11-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RB9894 f29fad65b383894332886c26ae28d0d1 342 PIRSF PIRSF000267 1 342 1.7E-117 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RB9894 f29fad65b383894332886c26ae28d0d1 342 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 331 4.5E-99 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RB9894 f29fad65b383894332886c26ae28d0d1 342 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 2 337 6.8E-80 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RB12118 65bbf640e0ae580a95a14adaf05d2173 498 SUPERFAMILY SSF53649 321 481 2.12E-21 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB12118 65bbf640e0ae580a95a14adaf05d2173 498 Pfam PF07394 Protein of unknown function (DUF1501) 70 497 1.1E-157 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB12118 65bbf640e0ae580a95a14adaf05d2173 498 Gene3D G3DSA:3.40.720.10 363 473 1.3E-5 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5084 373bceb987e99c56765a478a9d19688a 616 Gene3D G3DSA:3.50.50.60 534 607 4.1E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5084 373bceb987e99c56765a478a9d19688a 616 Gene3D G3DSA:3.50.50.60 436 437 4.1E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5084 373bceb987e99c56765a478a9d19688a 616 Gene3D G3DSA:3.50.50.60 204 340 4.1E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5084 373bceb987e99c56765a478a9d19688a 616 Pfam PF12831 FAD dependent oxidoreductase 209 605 2.7E-65 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5084 373bceb987e99c56765a478a9d19688a 616 SUPERFAMILY SSF51905 422 439 4.14E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5084 373bceb987e99c56765a478a9d19688a 616 SUPERFAMILY SSF51905 530 581 4.14E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB5084 373bceb987e99c56765a478a9d19688a 616 SUPERFAMILY SSF51905 204 385 4.14E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB3440 d796cbb1d4a6cca34df6696a7cbfca57 436 Pfam PF07607 Protein of unknown function (DUF1570) 272 402 9.1E-56 T 11-11-2016 IPR011464 Domain of unknown function DUF1570 RB12982 501f03561aa5f2b87d8a011898bb378b 257 Gene3D G3DSA:3.40.50.300 55 147 2.6E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12982 501f03561aa5f2b87d8a011898bb378b 257 SUPERFAMILY SSF52540 43 186 1.33E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8679 e2d86a0dd88e413dce9f882ebfbb6b18 477 Pfam PF01593 Flavin containing amine oxidoreductase 22 474 5.3E-44 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB8679 e2d86a0dd88e413dce9f882ebfbb6b18 477 Gene3D G3DSA:3.50.50.60 201 288 3.7E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8679 e2d86a0dd88e413dce9f882ebfbb6b18 477 Gene3D G3DSA:3.50.50.60 16 110 3.7E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8679 e2d86a0dd88e413dce9f882ebfbb6b18 477 SUPERFAMILY SSF51905 440 474 9.06E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB8679 e2d86a0dd88e413dce9f882ebfbb6b18 477 SUPERFAMILY SSF51905 16 294 9.06E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB172 9c51fcb57bf45c64ed4f312f26a12b96 315 Pfam PF01610 Transposase 64 302 2.4E-72 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RB4436 3d3857fffce032cf6295114379f20df9 90 Pfam PF04226 Transglycosylase associated protein 35 77 1.6E-8 T 11-11-2016 IPR007341 Transglycosylase-associated protein GO:0016021 RB7663 4d3ec91ae125dceb7aa6b921f96e88e6 167 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 134 3.9E-24 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RB7663 4d3ec91ae125dceb7aa6b921f96e88e6 167 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 15 133 7.5E-30 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RB7663 4d3ec91ae125dceb7aa6b921f96e88e6 167 Gene3D G3DSA:3.40.50.300 26 158 8.7E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7663 4d3ec91ae125dceb7aa6b921f96e88e6 167 SUPERFAMILY SSF52540 30 128 4.13E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10105 64ed3d8feada819f530a514cbcd4227d 115 Pfam PF07621 Protein of unknown function (DUF1582) 67 95 2.5E-15 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB4283 e4ab1c7c9c26fd921d31f01cdb695002 499 Gene3D G3DSA:1.10.1280.10 299 432 5.0E-5 T 11-11-2016 IPR008922 Uncharacterised domain, di-copper centre RB4283 e4ab1c7c9c26fd921d31f01cdb695002 499 SUPERFAMILY SSF48056 218 406 1.57E-5 T 11-11-2016 IPR008922 Uncharacterised domain, di-copper centre RB5887 a918684f9257c3170f528d1b8e3135de 292 Pfam PF00665 Integrase core domain 125 238 1.1E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 RB5887 a918684f9257c3170f528d1b8e3135de 292 Pfam PF13276 HTH-like domain 45 98 3.4E-10 T 11-11-2016 IPR025948 HTH-like domain RB5887 a918684f9257c3170f528d1b8e3135de 292 Gene3D G3DSA:3.30.420.10 119 276 4.0E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB5887 a918684f9257c3170f528d1b8e3135de 292 SUPERFAMILY SSF53098 117 279 8.95E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB5172 3956d31ea91534106786cefd34944b53 403 Pfam PF08666 SAF domain 71 128 8.1E-8 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 RB5172 3956d31ea91534106786cefd34944b53 403 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 137 241 8.3E-16 T 11-11-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain RB5172 3956d31ea91534106786cefd34944b53 403 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 35 256 7.2E-43 T 11-11-2016 IPR017592 Pilus assembly, Flp-type CpaB RB5172 3956d31ea91534106786cefd34944b53 403 SMART SM00858 68 130 1.4E-7 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 RB3317 922e3b6ff67dfcee73bf570fb3d06e34 480 SUPERFAMILY SSF55347 260 370 2.62E-22 T 11-11-2016 RB3317 922e3b6ff67dfcee73bf570fb3d06e34 480 SUPERFAMILY SSF55347 200 222 2.62E-22 T 11-11-2016 RB3317 922e3b6ff67dfcee73bf570fb3d06e34 480 Gene3D G3DSA:3.30.360.10 395 449 3.8E-26 T 11-11-2016 RB3317 922e3b6ff67dfcee73bf570fb3d06e34 480 Gene3D G3DSA:3.30.360.10 201 357 3.8E-26 T 11-11-2016 RB3317 922e3b6ff67dfcee73bf570fb3d06e34 480 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 62 186 2.8E-14 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB3317 922e3b6ff67dfcee73bf570fb3d06e34 480 Gene3D G3DSA:3.40.50.720 57 200 7.6E-37 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3317 922e3b6ff67dfcee73bf570fb3d06e34 480 SUPERFAMILY SSF51735 58 220 5.31E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5641 456caa30a31d32a522fdb079bdd596ee 542 Pfam PF03553 Na+/H+ antiporter family 162 505 5.5E-44 T 11-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 RB8078 a20d9a30bca660876750249db7ee8e20 503 Gene3D G3DSA:3.30.1120.10 373 475 8.7E-15 T 11-11-2016 RB8078 a20d9a30bca660876750249db7ee8e20 503 Pfam PF14707 C-terminal region of aryl-sulfatase 386 478 3.5E-6 T 11-11-2016 RB8078 a20d9a30bca660876750249db7ee8e20 503 SUPERFAMILY SSF53649 32 478 2.04E-120 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8078 a20d9a30bca660876750249db7ee8e20 503 Gene3D G3DSA:3.40.720.10 31 372 1.1E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8078 a20d9a30bca660876750249db7ee8e20 503 Pfam PF00884 Sulfatase 33 360 8.0E-70 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB11011 269647aaaa1b6b2cc9812bf793f59c2c 181 PIRSF PIRSF014995 6 180 8.6E-74 T 11-11-2016 IPR014469 Protein of unknown function DUF2271 RB11011 269647aaaa1b6b2cc9812bf793f59c2c 181 Pfam PF10029 Predicted periplasmic protein (DUF2271) 31 171 1.1E-53 T 11-11-2016 IPR014469 Protein of unknown function DUF2271 RB2484 ddf7edd8c1d7a98ff253b48946bad5ec 415 Gene3D G3DSA:3.40.50.2000 247 389 2.1E-16 T 11-11-2016 RB2484 ddf7edd8c1d7a98ff253b48946bad5ec 415 Pfam PF00534 Glycosyl transferases group 1 242 388 1.3E-20 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB2484 ddf7edd8c1d7a98ff253b48946bad5ec 415 SUPERFAMILY SSF53756 161 389 1.78E-36 T 11-11-2016 RB12611 cdf026b36b19bad2349750e67217b660 275 Gene3D G3DSA:3.40.50.150 59 247 4.0E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12611 cdf026b36b19bad2349750e67217b660 275 Pfam PF13847 Methyltransferase domain 68 204 7.1E-11 T 11-11-2016 IPR025714 Methyltransferase domain RB12611 cdf026b36b19bad2349750e67217b660 275 SUPERFAMILY SSF53335 60 214 8.51E-22 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8248 348cae88258fad516b0cb2ee1018efd1 253 Gene3D G3DSA:3.40.50.1820 16 253 2.4E-48 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB8248 348cae88258fad516b0cb2ee1018efd1 253 Pfam PF01738 Dienelactone hydrolase family 25 250 3.4E-28 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 RB8248 348cae88258fad516b0cb2ee1018efd1 253 SUPERFAMILY SSF53474 14 252 1.03E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB10217 d8828c338d1354b60c6f532339d72bd2 479 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 81 1.4E-18 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10217 d8828c338d1354b60c6f532339d72bd2 479 Gene3D G3DSA:1.10.1140.10 361 477 5.7E-49 T 11-11-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10217 d8828c338d1354b60c6f532339d72bd2 479 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 358 2.9E-62 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10217 d8828c338d1354b60c6f532339d72bd2 479 SUPERFAMILY SSF52540 85 363 4.6E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10217 d8828c338d1354b60c6f532339d72bd2 479 SMART SM00382 150 340 0.0016 T 11-11-2016 IPR003593 AAA+ ATPase domain RB10217 d8828c338d1354b60c6f532339d72bd2 479 Hamap MF_01347 ATP synthase subunit beta [atpB]. 5 476 56.808 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 RB10217 d8828c338d1354b60c6f532339d72bd2 479 SUPERFAMILY SSF50615 6 83 1.99E-24 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10217 d8828c338d1354b60c6f532339d72bd2 479 Gene3D G3DSA:2.40.10.170 4 83 3.8E-28 T 11-11-2016 RB10217 d8828c338d1354b60c6f532339d72bd2 479 SUPERFAMILY SSF47917 361 477 7.32E-50 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10217 d8828c338d1354b60c6f532339d72bd2 479 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RB10217 d8828c338d1354b60c6f532339d72bd2 479 Gene3D G3DSA:3.40.50.300 84 360 3.3E-106 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10217 d8828c338d1354b60c6f532339d72bd2 479 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 7 476 1.0E-233 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 RB1288 c9181e7b86a39a880c2ad0fa4992e361 99 Gene3D G3DSA:1.25.40.20 6 94 3.8E-16 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB1288 c9181e7b86a39a880c2ad0fa4992e361 99 SMART SM00248 4 33 0.38 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB1288 c9181e7b86a39a880c2ad0fa4992e361 99 SMART SM00248 38 67 0.48 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 RB1288 c9181e7b86a39a880c2ad0fa4992e361 99 SUPERFAMILY SSF48403 6 94 1.29E-17 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB1288 c9181e7b86a39a880c2ad0fa4992e361 99 Pfam PF13637 Ankyrin repeats (many copies) 7 59 4.2E-11 T 11-11-2016 RB2613 bf122f872f5e3a055b92b71bd7747ed1 644 SUPERFAMILY SSF53649 41 464 3.01E-81 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB2613 bf122f872f5e3a055b92b71bd7747ed1 644 Gene3D G3DSA:3.40.720.10 40 143 3.8E-23 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2613 bf122f872f5e3a055b92b71bd7747ed1 644 Pfam PF00884 Sulfatase 43 139 3.3E-16 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2613 bf122f872f5e3a055b92b71bd7747ed1 644 Pfam PF00884 Sulfatase 152 319 8.3E-22 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB2613 bf122f872f5e3a055b92b71bd7747ed1 644 Gene3D G3DSA:3.40.720.10 166 365 8.6E-31 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB2613 bf122f872f5e3a055b92b71bd7747ed1 644 Gene3D G3DSA:3.30.1120.10 419 469 2.9E-15 T 11-11-2016 RB2613 bf122f872f5e3a055b92b71bd7747ed1 644 Gene3D G3DSA:3.30.1120.10 366 381 2.9E-15 T 11-11-2016 RB9478 4085723c32bfb53382b632e3a5e72ee9 334 Gene3D G3DSA:3.40.50.150 64 332 1.9E-71 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9478 4085723c32bfb53382b632e3a5e72ee9 334 SUPERFAMILY SSF53335 27 320 8.99E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB9478 4085723c32bfb53382b632e3a5e72ee9 334 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 79 286 1.2E-25 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RB10555 e2f24263fb2eb0cd4e36264631130ffa 284 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 19 182 4.5E-27 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB10555 e2f24263fb2eb0cd4e36264631130ffa 284 Pfam PF13183 4Fe-4S dicluster domain 164 260 3.6E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB10555 e2f24263fb2eb0cd4e36264631130ffa 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 167 178 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RB10555 e2f24263fb2eb0cd4e36264631130ffa 284 SUPERFAMILY SSF54292 16 124 4.69E-20 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RB10555 e2f24263fb2eb0cd4e36264631130ffa 284 SUPERFAMILY SSF46548 128 271 4.01E-22 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RB10555 e2f24263fb2eb0cd4e36264631130ffa 284 Gene3D G3DSA:1.10.1060.10 127 282 7.8E-29 T 11-11-2016 RB10555 e2f24263fb2eb0cd4e36264631130ffa 284 Gene3D G3DSA:3.10.20.30 8 124 9.6E-26 T 11-11-2016 IPR012675 Beta-grasp domain RB10555 e2f24263fb2eb0cd4e36264631130ffa 284 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 17 129 7.5E-29 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RB11319 ce1fa9d7ba07cf4b974cb1e85961c932 551 Pfam PF13191 AAA ATPase domain 269 432 1.5E-9 T 11-11-2016 RB11319 ce1fa9d7ba07cf4b974cb1e85961c932 551 SUPERFAMILY SSF52540 257 518 7.71E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11319 ce1fa9d7ba07cf4b974cb1e85961c932 551 Pfam PF13271 Domain of unknown function (DUF4062) 6 131 8.3E-10 T 11-11-2016 IPR025139 Domain of unknown function DUF4062 RB11319 ce1fa9d7ba07cf4b974cb1e85961c932 551 Gene3D G3DSA:3.40.50.300 372 410 3.1E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11319 ce1fa9d7ba07cf4b974cb1e85961c932 551 Gene3D G3DSA:3.40.50.300 268 314 3.1E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3418 81429d54ab8de172558d02e8d0574aa0 213 Pfam PF08002 Protein of unknown function (DUF1697) 35 171 1.1E-43 T 11-11-2016 IPR012545 Protein of unknown function DUF1697 RB3418 81429d54ab8de172558d02e8d0574aa0 213 PIRSF PIRSF008502 35 213 6.8E-71 T 11-11-2016 IPR012545 Protein of unknown function DUF1697 RB3418 81429d54ab8de172558d02e8d0574aa0 213 Gene3D G3DSA:3.30.70.1280 33 123 3.4E-32 T 11-11-2016 RB3418 81429d54ab8de172558d02e8d0574aa0 213 SUPERFAMILY SSF160379 35 211 6.93E-52 T 11-11-2016 RB11941 b690b65133333439842aeb09976586e0 427 SUPERFAMILY SSF53448 74 252 4.82E-27 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11941 b690b65133333439842aeb09976586e0 427 Gene3D G3DSA:3.90.550.10 78 179 3.4E-21 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11941 b690b65133333439842aeb09976586e0 427 Pfam PF00535 Glycosyl transferase family 2 80 179 2.8E-18 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB9432 03a4101e379a8b45bcb77687124b51c0 269 SUPERFAMILY SSF49503 101 194 6.08E-13 T 11-11-2016 IPR008972 Cupredoxin RB9432 03a4101e379a8b45bcb77687124b51c0 269 Gene3D G3DSA:2.60.40.420 105 185 1.8E-4 T 11-11-2016 IPR008972 Cupredoxin RB921 aab243e65d8a547193bf8a36f5b54242 122 Gene3D G3DSA:3.30.230.10 13 116 8.6E-5 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB921 aab243e65d8a547193bf8a36f5b54242 122 SUPERFAMILY SSF54211 9 114 4.17E-6 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB8781 18ddbdb0dfde725b62037e400fc16580 371 SUPERFAMILY SSF51735 3 152 1.01E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain RB8781 18ddbdb0dfde725b62037e400fc16580 371 SUPERFAMILY SSF55347 132 287 6.21E-11 T 11-11-2016 RB8781 18ddbdb0dfde725b62037e400fc16580 371 Gene3D G3DSA:3.30.360.10 313 362 4.7E-8 T 11-11-2016 RB8781 18ddbdb0dfde725b62037e400fc16580 371 Gene3D G3DSA:3.30.360.10 144 275 4.7E-8 T 11-11-2016 RB8781 18ddbdb0dfde725b62037e400fc16580 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 2.1E-22 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB8781 18ddbdb0dfde725b62037e400fc16580 371 Gene3D G3DSA:3.40.50.720 2 143 1.9E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7846 4494a914fb4390ce962cf6a1743d1b96 72 Pfam PF00831 Ribosomal L29 protein 10 65 1.8E-18 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7846 4494a914fb4390ce962cf6a1743d1b96 72 SUPERFAMILY SSF46561 5 68 3.27E-17 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7846 4494a914fb4390ce962cf6a1743d1b96 72 TIGRFAM TIGR00012 L29: ribosomal protein uL29 10 65 1.6E-16 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7846 4494a914fb4390ce962cf6a1743d1b96 72 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 5 65 15.811 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB7846 4494a914fb4390ce962cf6a1743d1b96 72 Gene3D G3DSA:1.10.287.310 7 68 1.0E-19 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RB4091 36e32d0ce11c3d0426647a5e9f1397dd 401 Pfam PF01609 Transposase DDE domain 133 364 6.1E-13 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB4091 36e32d0ce11c3d0426647a5e9f1397dd 401 Pfam PF13808 DDE_Tnp_1-associated 23 108 5.0E-30 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal RB2475 36e32d0ce11c3d0426647a5e9f1397dd 401 Pfam PF01609 Transposase DDE domain 133 364 6.1E-13 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB2475 36e32d0ce11c3d0426647a5e9f1397dd 401 Pfam PF13808 DDE_Tnp_1-associated 23 108 5.0E-30 T 11-11-2016 IPR032806 H repeat-associated protein, N-terminal RB13030 51d2e0b135700d5a20fbed62e786844c 341 Pfam PF07596 Protein of unknown function (DUF1559) 36 321 7.7E-40 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB13030 51d2e0b135700d5a20fbed62e786844c 341 SUPERFAMILY SSF54523 12 121 1.41E-18 T 11-11-2016 RB13030 51d2e0b135700d5a20fbed62e786844c 341 Pfam PF13633 Prokaryotic N-terminal methylation site 10 35 7.6E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB13030 51d2e0b135700d5a20fbed62e786844c 341 Gene3D G3DSA:3.30.700.10 12 54 1.5E-6 T 11-11-2016 RB13030 51d2e0b135700d5a20fbed62e786844c 341 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 2.1E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1480 5ca4501f44c55ff03889b477f194ecb9 577 Pfam PF00920 Dehydratase family 45 560 3.7E-168 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB1480 5ca4501f44c55ff03889b477f194ecb9 577 SUPERFAMILY SSF143975 8 379 8.24E-116 T 11-11-2016 RB1480 5ca4501f44c55ff03889b477f194ecb9 577 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 128 138 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RB1480 5ca4501f44c55ff03889b477f194ecb9 577 SUPERFAMILY SSF52016 380 565 7.14E-54 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RB11643 8fe5cdc8c3473f6f70ba3bba2df82855 389 Pfam PF01420 Type I restriction modification DNA specificity domain 5 164 6.5E-28 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RB11643 8fe5cdc8c3473f6f70ba3bba2df82855 389 Pfam PF01420 Type I restriction modification DNA specificity domain 216 350 2.1E-6 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RB11643 8fe5cdc8c3473f6f70ba3bba2df82855 389 SUPERFAMILY SSF116734 197 388 2.29E-30 T 11-11-2016 RB11643 8fe5cdc8c3473f6f70ba3bba2df82855 389 SUPERFAMILY SSF116734 6 191 2.13E-44 T 11-11-2016 RB11487 1742b23c98818dc0f676c6411a3d6829 141 Pfam PF07681 DoxX 17 98 7.5E-19 T 11-11-2016 IPR032808 DoxX family RB4245 bcc6924f46436d0097bf9e4a63624bec 149 Pfam PF06713 Bacterial PH domain 65 136 3.9E-18 T 11-11-2016 IPR009589 Sublancin immunity protein SunI GO:0030153 RB10127 cc673eb3dba1bf85388570c6a09566e2 468 SUPERFAMILY SSF50952 113 465 1.31E-33 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB10127 cc673eb3dba1bf85388570c6a09566e2 468 Gene3D G3DSA:2.120.10.30 108 466 3.3E-99 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB10127 cc673eb3dba1bf85388570c6a09566e2 468 Pfam PF07995 Glucose / Sorbosone dehydrogenase 125 463 8.1E-51 T 11-11-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RB10614 788aa5f0f7ac2e5cd478576b9292e089 369 Pfam PF13439 Glycosyltransferase Family 4 12 175 1.2E-18 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB10614 788aa5f0f7ac2e5cd478576b9292e089 369 Gene3D G3DSA:3.40.50.2000 156 342 6.1E-30 T 11-11-2016 RB10614 788aa5f0f7ac2e5cd478576b9292e089 369 Pfam PF00534 Glycosyl transferases group 1 189 345 1.0E-28 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB10614 788aa5f0f7ac2e5cd478576b9292e089 369 SUPERFAMILY SSF53756 10 368 1.45E-71 T 11-11-2016 RB13124 1dda8f776af3a695518491750a34939c 645 Pfam PF07587 Protein of unknown function (DUF1553) 351 617 9.2E-89 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB13124 1dda8f776af3a695518491750a34939c 645 Pfam PF07583 Protein of unknown function (DUF1549) 82 286 3.4E-83 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB11238 631eb066115fa6fb4bd31023c9cfcfb0 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 212 398 4.0E-33 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RB11238 631eb066115fa6fb4bd31023c9cfcfb0 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 2 325 3.4E-23 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RB11238 631eb066115fa6fb4bd31023c9cfcfb0 407 SUPERFAMILY SSF111369 162 329 8.63E-12 T 11-11-2016 RB11238 631eb066115fa6fb4bd31023c9cfcfb0 407 Gene3D G3DSA:2.40.50.100 12 45 1.1E-10 T 11-11-2016 RB11238 631eb066115fa6fb4bd31023c9cfcfb0 407 Gene3D G3DSA:2.40.50.100 217 250 1.1E-10 T 11-11-2016 RB2110 aa98bf366a5ff4b40e6bb1dd7c60f9ca 467 Pfam PF01554 MatE 247 410 2.8E-15 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RB2110 aa98bf366a5ff4b40e6bb1dd7c60f9ca 467 Pfam PF01554 MatE 14 172 7.0E-19 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RB2110 aa98bf366a5ff4b40e6bb1dd7c60f9ca 467 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 409 1.5E-48 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RB3598 429989b9d60e3f27f88580d8f6ebf2cd 442 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 42 429 3.9E-140 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RB3598 429989b9d60e3f27f88580d8f6ebf2cd 442 Pfam PF02601 Exonuclease VII, large subunit 157 377 1.2E-70 T 11-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RB3598 429989b9d60e3f27f88580d8f6ebf2cd 442 Pfam PF02601 Exonuclease VII, large subunit 364 426 6.4E-11 T 11-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RB3598 429989b9d60e3f27f88580d8f6ebf2cd 442 Pfam PF13742 OB-fold nucleic acid binding domain 42 132 9.9E-31 T 11-11-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RB3598 429989b9d60e3f27f88580d8f6ebf2cd 442 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 38 430 26.947 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RB4294 bdc2113160eaa13ed44a4e72f5cd8fae 306 SUPERFAMILY SSF54001 21 287 3.3E-31 T 11-11-2016 RB4294 bdc2113160eaa13ed44a4e72f5cd8fae 306 Gene3D G3DSA:3.90.70.10 51 272 1.3E-19 T 11-11-2016 RB4294 bdc2113160eaa13ed44a4e72f5cd8fae 306 Pfam PF00112 Papain family cysteine protease 55 269 3.6E-6 T 11-11-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 RB5147 bfc8aa4d5e5e23853f0be2dd8e540179 717 Pfam PF07619 Protein of unknown function (DUF1581) 18 97 1.8E-32 T 11-11-2016 IPR022660 Domain of unknown function DUF1581 RB5147 bfc8aa4d5e5e23853f0be2dd8e540179 717 Pfam PF07622 Protein of unknown function (DUF1583) 125 512 1.2E-162 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB5147 bfc8aa4d5e5e23853f0be2dd8e540179 717 Pfam PF07622 Protein of unknown function (DUF1583) 512 713 7.7E-15 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB423 22b9ce2eda441a0b3a97ed487e08fe77 216 Pfam PF01613 Flavin reductase like domain 41 184 9.6E-21 T 11-11-2016 IPR002563 Flavin reductase like domain GO:0010181 RB423 22b9ce2eda441a0b3a97ed487e08fe77 216 Gene3D G3DSA:2.30.110.10 32 209 2.5E-58 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB423 22b9ce2eda441a0b3a97ed487e08fe77 216 SUPERFAMILY SSF50475 19 215 2.4E-45 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 RB423 22b9ce2eda441a0b3a97ed487e08fe77 216 SMART SM00903 38 191 8.9E-27 T 11-11-2016 IPR002563 Flavin reductase like domain GO:0010181 RB2680 ff7350d00a1980d50a5fb701a8d59686 467 Pfam PF07884 Vitamin K epoxide reductase family 16 141 3.1E-19 T 11-11-2016 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 RB2680 ff7350d00a1980d50a5fb701a8d59686 467 ProSitePatterns PS00194 Thioredoxin family active site. 307 325 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RB2680 ff7350d00a1980d50a5fb701a8d59686 467 SMART SM00756 11 148 2.7E-34 T 11-11-2016 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 RB2680 ff7350d00a1980d50a5fb701a8d59686 467 Gene3D G3DSA:3.40.30.10 290 465 8.2E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold RB2680 ff7350d00a1980d50a5fb701a8d59686 467 SUPERFAMILY SSF52833 291 466 9.62E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold RB2680 ff7350d00a1980d50a5fb701a8d59686 467 Pfam PF13462 Thioredoxin 296 441 5.6E-9 T 11-11-2016 IPR012336 Thioredoxin-like fold RB2822 bf0dd02caf6cf141ac81df74efaaa8f9 499 Pfam PF07643 Protein of unknown function (DUF1598) 217 300 1.0E-35 T 11-11-2016 IPR011487 Protein of unknown function DUF1598 RB8976 62a630496021a7a66032a331000d2b97 92 SMART SM00834 1 42 5.0E-18 T 11-11-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RB8976 62a630496021a7a66032a331000d2b97 92 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 53 4.1E-20 T 11-11-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RB8976 62a630496021a7a66032a331000d2b97 92 Pfam PF09723 Zinc ribbon domain 1 41 2.3E-15 T 11-11-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RB5320 215a7296634d274d7383d77cb4fd9320 396 Gene3D G3DSA:3.40.50.720 224 361 1.5E-21 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5320 215a7296634d274d7383d77cb4fd9320 396 Gene3D G3DSA:3.90.180.10 51 223 1.0E-46 T 11-11-2016 IPR011032 GroES-like RB5320 215a7296634d274d7383d77cb4fd9320 396 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 117 131 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RB5320 215a7296634d274d7383d77cb4fd9320 396 Pfam PF00107 Zinc-binding dehydrogenase 233 356 3.1E-11 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB5320 215a7296634d274d7383d77cb4fd9320 396 SUPERFAMILY SSF50129 59 229 7.46E-43 T 11-11-2016 IPR011032 GroES-like RB5320 215a7296634d274d7383d77cb4fd9320 396 SUPERFAMILY SSF51735 196 361 4.11E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5320 215a7296634d274d7383d77cb4fd9320 396 SMART SM00829 68 393 1.6E-4 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RB5320 215a7296634d274d7383d77cb4fd9320 396 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 83 190 1.0E-24 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB13080 502bf89410d6fec698c8e71de48d4435 235 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 86 201 5.6E-13 T 11-11-2016 RB5323 da56d944a05aaea59143b11af56d0bf5 364 SUPERFAMILY SSF52266 96 295 1.98E-32 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB5323 da56d944a05aaea59143b11af56d0bf5 364 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 99 285 1.2E-19 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB5323 da56d944a05aaea59143b11af56d0bf5 364 Gene3D G3DSA:3.40.50.1110 95 295 1.8E-33 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB5363 e8c0791f280e3706baecbf125bfc35f3 211 Gene3D G3DSA:3.40.50.360 24 206 1.4E-48 T 11-11-2016 IPR029039 Flavoprotein-like domain RB5363 e8c0791f280e3706baecbf125bfc35f3 211 Pfam PF00258 Flavodoxin 30 159 1.3E-7 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RB5363 e8c0791f280e3706baecbf125bfc35f3 211 SUPERFAMILY SSF52218 25 204 6.42E-46 T 11-11-2016 IPR029039 Flavoprotein-like domain RB13084 3810144d19e22ae3a43fefb656eda083 179 Pfam PF05685 Putative restriction endonuclease 15 156 1.6E-30 T 11-11-2016 IPR008538 Domain of unknown function DUF820 RB13084 3810144d19e22ae3a43fefb656eda083 179 Gene3D G3DSA:3.90.1570.10 5 156 1.4E-31 T 11-11-2016 IPR012296 Nuclease, putative, TT1808 RB13084 3810144d19e22ae3a43fefb656eda083 179 SUPERFAMILY SSF52980 6 165 8.04E-32 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RB3451 a464fa85fcf95315f2d9386d07cd7043 166 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 44 59 - T 11-11-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RB3451 a464fa85fcf95315f2d9386d07cd7043 166 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 11 164 3.7E-53 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RB3451 a464fa85fcf95315f2d9386d07cd7043 166 Pfam PF02542 YgbB family 10 163 4.8E-55 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RB3451 a464fa85fcf95315f2d9386d07cd7043 166 SUPERFAMILY SSF69765 9 165 1.57E-54 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RB3451 a464fa85fcf95315f2d9386d07cd7043 166 Gene3D G3DSA:3.30.1330.50 9 165 4.1E-59 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RB3451 a464fa85fcf95315f2d9386d07cd7043 166 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 10 165 31.486 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RB7285 6b6b21082a465fe4b52e051ffb394318 333 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 13 302 1.9E-32 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RB12009 e6c4c270c9ae0cb6bb549312409e9740 514 SUPERFAMILY SSF53850 90 496 5.09E-19 T 11-11-2016 RB12009 e6c4c270c9ae0cb6bb549312409e9740 514 Gene3D G3DSA:3.40.190.10 235 420 1.1E-7 T 11-11-2016 RB4410 3e5df73ca241a6b9e7ca47c2728e2b77 223 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 3 195 2.5E-28 T 11-11-2016 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related RB107 8541d54937a9bb8bd4583920062656a8 459 Pfam PF13570 PQQ-like domain 340 377 1.0E-7 T 11-11-2016 IPR025666 Pyrrolo-quinoline quinone-like domain RB107 8541d54937a9bb8bd4583920062656a8 459 Pfam PF13570 PQQ-like domain 391 415 7.3E-4 T 11-11-2016 IPR025666 Pyrrolo-quinoline quinone-like domain RB107 8541d54937a9bb8bd4583920062656a8 459 Gene3D G3DSA:2.140.10.10 19 456 4.9E-64 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB107 8541d54937a9bb8bd4583920062656a8 459 Pfam PF13360 PQQ-like domain 124 289 1.6E-10 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB107 8541d54937a9bb8bd4583920062656a8 459 SUPERFAMILY SSF50998 29 456 1.31E-53 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB107 8541d54937a9bb8bd4583920062656a8 459 SMART SM00564 103 139 260.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB107 8541d54937a9bb8bd4583920062656a8 459 SMART SM00564 354 385 72.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB107 8541d54937a9bb8bd4583920062656a8 459 SMART SM00564 160 190 28.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB107 8541d54937a9bb8bd4583920062656a8 459 SMART SM00564 395 425 350.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB1149 1249fb493a1b3d89811865fa972a9903 313 Pfam PF00482 Type II secretion system (T2SS), protein F 170 299 1.0E-19 T 11-11-2016 IPR018076 Type II secretion system F domain RB10566 8c1f403fc793e9ba33806aa1d551f6d7 483 Pfam PF02447 GntP family permease 75 478 1.3E-76 T 11-11-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RB1100 5c832c4088a557f410c7e64f571167c4 166 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 8 154 4.4E-51 T 11-11-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 RB1100 5c832c4088a557f410c7e64f571167c4 166 PRINTS PR01759 Capsule biosynthesis protein CapC signature 63 77 1.1E-5 T 11-11-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 RB1100 5c832c4088a557f410c7e64f571167c4 166 PRINTS PR01759 Capsule biosynthesis protein CapC signature 18 35 1.1E-5 T 11-11-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 RB1100 5c832c4088a557f410c7e64f571167c4 166 Pfam PF14102 Capsule biosynthesis CapC 10 143 3.7E-35 T 11-11-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 RB453 7797e0f921e7581179d86639d50372cb 189 Pfam PF12635 Protein of unknown function (DUF3780) 4 178 1.4E-75 T 11-11-2016 IPR024220 Protein of unknown function DUF3780 RB9208 96ed494fc1fec995936a3f79a17e6489 281 Pfam PF01925 Sulfite exporter TauE/SafE 10 278 3.7E-32 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RB7404 10f1484872f10f0c71039b54d5b7010d 310 Gene3D G3DSA:3.40.50.1400 171 303 1.4E-15 T 11-11-2016 RB7404 10f1484872f10f0c71039b54d5b7010d 310 Gene3D G3DSA:3.40.50.1400 35 158 7.4E-24 T 11-11-2016 RB7404 10f1484872f10f0c71039b54d5b7010d 310 Pfam PF01903 CbiX 217 297 6.2E-13 T 11-11-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 RB7404 10f1484872f10f0c71039b54d5b7010d 310 Pfam PF01903 CbiX 42 149 5.0E-23 T 11-11-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 RB7404 10f1484872f10f0c71039b54d5b7010d 310 SUPERFAMILY SSF53800 35 302 1.96E-35 T 11-11-2016 RB7911 95a9a618ca8ade58376fc847395b2020 408 Gene3D G3DSA:2.40.10.10 158 249 5.8E-14 T 11-11-2016 RB7911 95a9a618ca8ade58376fc847395b2020 408 Gene3D G3DSA:3.30.1460.10 298 394 4.4E-4 T 11-11-2016 RB7911 95a9a618ca8ade58376fc847395b2020 408 Pfam PF13365 Trypsin-like peptidase domain 65 224 1.0E-24 T 11-11-2016 RB7911 95a9a618ca8ade58376fc847395b2020 408 SUPERFAMILY SSF50494 41 250 6.15E-35 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB7911 95a9a618ca8ade58376fc847395b2020 408 Gene3D G3DSA:2.40.10.10 59 157 6.2E-20 T 11-11-2016 RB4395 f94eb7e63dec78e19520565ee839a2d4 170 Gene3D G3DSA:1.20.5.810 9 38 5.2E-5 T 11-11-2016 RB4395 f94eb7e63dec78e19520565ee839a2d4 170 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 97 1.0E-8 T 11-11-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RB4395 f94eb7e63dec78e19520565ee839a2d4 170 SUPERFAMILY SSF69118 1 169 7.78E-42 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB4395 f94eb7e63dec78e19520565ee839a2d4 170 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 120 1.1E-13 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RB4395 f94eb7e63dec78e19520565ee839a2d4 170 Gene3D G3DSA:1.20.1290.10 39 168 1.1E-36 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB7995 c5c9189ffd55347ab71336692efceb03 656 ProSitePatterns PS00523 Sulfatases signature 1. 147 159 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB7995 c5c9189ffd55347ab71336692efceb03 656 SUPERFAMILY SSF53649 100 496 1.29E-117 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7995 c5c9189ffd55347ab71336692efceb03 656 Pfam PF00884 Sulfatase 102 397 4.9E-76 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB7995 c5c9189ffd55347ab71336692efceb03 656 Gene3D G3DSA:3.30.1120.10 439 498 2.3E-9 T 11-11-2016 RB7995 c5c9189ffd55347ab71336692efceb03 656 Gene3D G3DSA:3.40.720.10 99 417 8.3E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB11990 ffa2926504d37151b995be06dc5d7ad2 216 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 2 182 2.1E-68 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB11990 ffa2926504d37151b995be06dc5d7ad2 216 Gene3D G3DSA:1.10.10.10 126 183 2.1E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB11990 ffa2926504d37151b995be06dc5d7ad2 216 SUPERFAMILY SSF88659 105 184 1.24E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB11990 ffa2926504d37151b995be06dc5d7ad2 216 Pfam PF07638 ECF sigma factor 2 184 9.7E-73 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB11990 ffa2926504d37151b995be06dc5d7ad2 216 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 182 2.5E-14 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10188 5617f64638bf9b81c5da35e9963424f7 211 Gene3D G3DSA:3.40.50.2020 3 207 4.4E-72 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB10188 5617f64638bf9b81c5da35e9963424f7 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 207 8.0E-70 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RB10188 5617f64638bf9b81c5da35e9963424f7 211 Pfam PF14681 Uracil phosphoribosyltransferase 6 207 3.6E-69 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB10188 5617f64638bf9b81c5da35e9963424f7 211 SUPERFAMILY SSF53271 4 205 1.01E-55 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like RB5016 a108cbd539d2fa163449ceb88aebe3df 235 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 15 139 6.8E-9 T 11-11-2016 IPR002654 Glycosyl transferase, family 25 RB11998 a72887dee29ac2c0aa70719c2325941b 412 Gene3D G3DSA:3.90.1580.10 73 370 4.5E-62 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB11998 a72887dee29ac2c0aa70719c2325941b 412 SUPERFAMILY SSF56436 83 365 3.77E-56 T 11-11-2016 IPR016187 C-type lectin fold RB11998 a72887dee29ac2c0aa70719c2325941b 412 Pfam PF03781 Sulfatase-modifying factor enzyme 1 85 331 5.3E-40 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB686 f3640e743cb2c702dfe85a13a590060f 549 Gene3D G3DSA:3.30.1120.10 462 532 5.1E-20 T 11-11-2016 RB686 f3640e743cb2c702dfe85a13a590060f 549 SUPERFAMILY SSF53649 29 532 7.72E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB686 f3640e743cb2c702dfe85a13a590060f 549 Gene3D G3DSA:3.40.720.10 291 461 1.9E-103 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB686 f3640e743cb2c702dfe85a13a590060f 549 Gene3D G3DSA:3.40.720.10 29 223 1.9E-103 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB686 f3640e743cb2c702dfe85a13a590060f 549 ProSitePatterns PS00149 Sulfatases signature 2. 126 136 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB686 f3640e743cb2c702dfe85a13a590060f 549 Pfam PF00884 Sulfatase 31 421 2.0E-68 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB10641 14487a3309e713cc1db09f0cad1c0fc8 309 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 164 205 0.18 T 11-11-2016 IPR001330 PFTB repeat GO:0003824 RB10641 14487a3309e713cc1db09f0cad1c0fc8 309 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 28 60 1.7E-8 T 11-11-2016 IPR001330 PFTB repeat GO:0003824 RB10641 14487a3309e713cc1db09f0cad1c0fc8 309 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 125 143 2.0 T 11-11-2016 IPR001330 PFTB repeat GO:0003824 RB10641 14487a3309e713cc1db09f0cad1c0fc8 309 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 276 304 0.2 T 11-11-2016 IPR001330 PFTB repeat GO:0003824 RB10641 14487a3309e713cc1db09f0cad1c0fc8 309 Gene3D G3DSA:1.50.10.20 16 84 1.7E-10 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB10641 14487a3309e713cc1db09f0cad1c0fc8 309 Gene3D G3DSA:1.50.10.20 109 305 3.8E-27 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB10641 14487a3309e713cc1db09f0cad1c0fc8 309 SUPERFAMILY SSF48239 118 306 3.99E-32 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB10641 14487a3309e713cc1db09f0cad1c0fc8 309 SUPERFAMILY SSF48239 18 70 3.99E-32 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB6328 acb6c5c86acd2d9d50689b56c8809ffd 188 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 1 181 2.4E-38 T 11-11-2016 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 RB6328 acb6c5c86acd2d9d50689b56c8809ffd 188 SUPERFAMILY SSF55154 1 186 2.13E-38 T 11-11-2016 IPR033469 CYTH-like domain Reactome: R-HSA-196819 RB6328 acb6c5c86acd2d9d50689b56c8809ffd 188 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 1 156 8.0E-87 T 11-11-2016 RB6328 acb6c5c86acd2d9d50689b56c8809ffd 188 Gene3D G3DSA:2.40.320.10 2 182 3.2E-44 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 RB6328 acb6c5c86acd2d9d50689b56c8809ffd 188 Pfam PF01928 CYTH domain 1 174 2.4E-31 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 RB6328 acb6c5c86acd2d9d50689b56c8809ffd 188 SMART SM01118 1 184 4.7E-31 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 RB11063 9144f6a0020d811649305ff853684626 768 Gene3D G3DSA:3.40.1050.10 518 752 6.3E-52 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RB11063 9144f6a0020d811649305ff853684626 768 SMART SM00947 575 748 2.8E-49 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RB11063 9144f6a0020d811649305ff853684626 768 Pfam PF00916 Sulfate permease family 19 404 1.7E-59 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RB11063 9144f6a0020d811649305ff853684626 768 SUPERFAMILY SSF53056 525 750 2.35E-50 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RB11063 9144f6a0020d811649305ff853684626 768 Pfam PF00484 Carbonic anhydrase 583 743 3.2E-36 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 Pfam PF00404 Dockerin type I repeat 5863 5883 1.5E-4 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 1737 1789 8200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 1849 1877 6200.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 2540 2562 2500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 4610 4632 1.2 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 4554 4576 630.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 4530 4552 4500.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 3334 3356 640.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 1245 1267 400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 4851 4872 610.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 3008 3032 5100.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SMART SM00710 1300 1322 640.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 4027 4100 2.7E-6 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 891 967 1.9E-7 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 2436 2484 4.0E-6 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SUPERFAMILY SSF50998 3294 3421 5.49E-5 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 SUPERFAMILY SSF50998 2902 2980 5.49E-5 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 Gene3D G3DSA:2.60.120.380 2715 2838 1.9E-4 T 11-11-2016 RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 Gene3D G3DSA:2.60.120.380 2400 2484 2.8E-5 T 11-11-2016 RB3077 56cd8c576e75cf05b9f9d7d7335e511b 6007 Gene3D G3DSA:2.60.120.380 888 972 3.9E-6 T 11-11-2016 RB452 ab36b94bef6783632066624a8e1856ab 1031 Pfam PF04465 Protein of unknown function (DUF499) 127 392 1.4E-24 T 11-11-2016 IPR007555 Protein of unknown function DUF499 RB452 ab36b94bef6783632066624a8e1856ab 1031 Pfam PF13287 Fn3 associated 854 893 8.8E-8 T 11-11-2016 IPR026876 Fn3 associated repeat RB2136 22fdb6f9aa2d90f685a975cb79dfa242 660 SUPERFAMILY SSF52047 505 657 9.42E-17 T 11-11-2016 RB2136 22fdb6f9aa2d90f685a975cb79dfa242 660 Gene3D G3DSA:3.80.10.10 505 658 4.8E-20 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB5198 aabca8cddf801f91e0d2e52b4063338f 342 SUPERFAMILY SSF53613 18 322 1.4E-50 T 11-11-2016 IPR029056 Ribokinase-like RB5198 aabca8cddf801f91e0d2e52b4063338f 342 Gene3D G3DSA:3.40.1190.20 18 322 1.2E-51 T 11-11-2016 IPR029056 Ribokinase-like RB5198 aabca8cddf801f91e0d2e52b4063338f 342 Pfam PF00294 pfkB family carbohydrate kinase 32 323 1.0E-35 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB RB7494 2bb041beb4b7e2beee198af0ff736412 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 121 7.6E-13 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RB7494 2bb041beb4b7e2beee198af0ff736412 345 SUPERFAMILY SSF51735 2 151 1.04E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7494 2bb041beb4b7e2beee198af0ff736412 345 Gene3D G3DSA:3.40.50.720 2 138 1.0E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7494 2bb041beb4b7e2beee198af0ff736412 345 SUPERFAMILY SSF55347 129 292 9.16E-18 T 11-11-2016 RB7494 2bb041beb4b7e2beee198af0ff736412 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 195 5.3E-6 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RB7494 2bb041beb4b7e2beee198af0ff736412 345 Gene3D G3DSA:3.30.360.10 139 342 5.3E-24 T 11-11-2016 RB8080 2d090a9de65a77ff3ea5b9d9aaa9d187 253 Gene3D G3DSA:3.20.20.70 12 248 4.6E-77 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB8080 2d090a9de65a77ff3ea5b9d9aaa9d187 253 SUPERFAMILY SSF51366 12 248 1.41E-63 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB8080 2d090a9de65a77ff3ea5b9d9aaa9d187 253 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 13 249 33.058 T 11-11-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 RB8080 2d090a9de65a77ff3ea5b9d9aaa9d187 253 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 14 244 6.7E-73 T 11-11-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 RB8080 2d090a9de65a77ff3ea5b9d9aaa9d187 253 Pfam PF00977 Histidine biosynthesis protein 13 241 2.1E-74 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 RB3593 fd65d1bf1fa0d9bec375aeb45fd94280 275 Pfam PF01522 Polysaccharide deacetylase 18 133 9.1E-17 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB3593 fd65d1bf1fa0d9bec375aeb45fd94280 275 SUPERFAMILY SSF88713 14 139 2.56E-22 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RB3593 fd65d1bf1fa0d9bec375aeb45fd94280 275 SUPERFAMILY SSF88713 170 266 2.56E-22 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RB3593 fd65d1bf1fa0d9bec375aeb45fd94280 275 Gene3D G3DSA:3.20.20.370 14 135 2.5E-19 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB3593 fd65d1bf1fa0d9bec375aeb45fd94280 275 Gene3D G3DSA:3.20.20.370 228 256 2.5E-19 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB8726 495ac28ecf7d9d899fe6b92797fc0853 599 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 44 590 3.9E-154 T 11-11-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RB8726 495ac28ecf7d9d899fe6b92797fc0853 599 Pfam PF01368 DHH family 98 239 5.6E-11 T 11-11-2016 IPR001667 DDH domain RB8726 495ac28ecf7d9d899fe6b92797fc0853 599 SUPERFAMILY SSF64182 72 484 3.4E-102 T 11-11-2016 RB5367 c41bf2f23f187a7c1c716d2a656b84d0 580 Pfam PF13408 Recombinase zinc beta ribbon domain 319 381 7.4E-13 T 11-11-2016 IPR025827 Recombinase zinc beta ribbon domain RB5367 c41bf2f23f187a7c1c716d2a656b84d0 580 SUPERFAMILY SSF53041 6 154 2.22E-28 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RB5367 c41bf2f23f187a7c1c716d2a656b84d0 580 Pfam PF07508 Recombinase 186 305 1.3E-18 T 11-11-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 RB5367 c41bf2f23f187a7c1c716d2a656b84d0 580 Pfam PF00239 Resolvase, N terminal domain 7 155 1.9E-32 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RB5367 c41bf2f23f187a7c1c716d2a656b84d0 580 Gene3D G3DSA:3.40.50.1390 6 139 4.7E-21 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RB5367 c41bf2f23f187a7c1c716d2a656b84d0 580 SMART SM00857 7 156 3.7E-41 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RB5367 c41bf2f23f187a7c1c716d2a656b84d0 580 ProSitePatterns PS00397 Site-specific recombinases active site. 10 18 - T 11-11-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RB7643 92244ca00151a2772d840db2a1d9d3fa 284 Pfam PF00535 Glycosyl transferase family 2 58 190 3.2E-35 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB7643 92244ca00151a2772d840db2a1d9d3fa 284 Gene3D G3DSA:3.90.550.10 57 258 7.7E-31 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB7643 92244ca00151a2772d840db2a1d9d3fa 284 SUPERFAMILY SSF53448 57 264 2.16E-46 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6807 f7a3dda095f03c5c406807f627c1af1d 732 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 115 412 8.4E-92 T 11-11-2016 IPR005181 Sialate O-acetylesterase domain RB6807 f7a3dda095f03c5c406807f627c1af1d 732 SUPERFAMILY SSF52266 290 466 2.75E-75 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB6807 f7a3dda095f03c5c406807f627c1af1d 732 SUPERFAMILY SSF52266 114 216 2.75E-75 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB8992 fdbb925f4654c1d7d8b45b1fa81cb9a1 685 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 80 1.6E-27 T 11-11-2016 IPR011933 Double transmembrane domain RB8992 fdbb925f4654c1d7d8b45b1fa81cb9a1 685 Pfam PF07584 Aerotolerance regulator N-terminal 1 76 1.2E-15 T 11-11-2016 IPR024163 Aerotolerance regulator, N-terminal RB3818 3afe37a716cfb7bd233dd2e3cfacd537 354 SUPERFAMILY SSF52266 81 168 1.03E-6 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3818 3afe37a716cfb7bd233dd2e3cfacd537 354 SUPERFAMILY SSF52266 242 345 1.03E-6 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3818 3afe37a716cfb7bd233dd2e3cfacd537 354 Gene3D G3DSA:3.40.50.1110 82 167 8.1E-5 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB3818 3afe37a716cfb7bd233dd2e3cfacd537 354 Gene3D G3DSA:3.40.50.1110 234 349 8.1E-5 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB1059 d7108786f35f8e84f7b2429949d370de 293 SUPERFAMILY SSF50494 76 114 7.61E-5 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB1059 d7108786f35f8e84f7b2429949d370de 293 SUPERFAMILY SSF50494 160 281 7.61E-5 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB5383 6fc3aedf0a58e0617e29778755d26d48 558 Gene3D G3DSA:3.30.1120.10 481 534 1.5E-17 T 11-11-2016 RB5383 6fc3aedf0a58e0617e29778755d26d48 558 Gene3D G3DSA:3.30.1120.10 405 421 1.5E-17 T 11-11-2016 RB5383 6fc3aedf0a58e0617e29778755d26d48 558 SUPERFAMILY SSF53649 33 429 4.71E-67 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5383 6fc3aedf0a58e0617e29778755d26d48 558 SUPERFAMILY SSF53649 467 527 4.71E-67 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5383 6fc3aedf0a58e0617e29778755d26d48 558 Gene3D G3DSA:3.40.720.10 34 404 1.1E-46 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5383 6fc3aedf0a58e0617e29778755d26d48 558 Pfam PF00884 Sulfatase 36 351 1.6E-20 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB3154 9c273762e6bc280cc416149545e08a0a 76 Pfam PF07623 Protein of unknown function (DUF1584) 2 28 8.6E-14 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB3960 97c2d2d0fb8659c9abc0dead6e4a5596 612 Pfam PF02080 TrkA-C domain 333 393 3.4E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB3960 97c2d2d0fb8659c9abc0dead6e4a5596 612 Pfam PF02080 TrkA-C domain 244 310 1.2E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB3960 97c2d2d0fb8659c9abc0dead6e4a5596 612 SUPERFAMILY SSF116726 237 315 3.66E-15 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB3960 97c2d2d0fb8659c9abc0dead6e4a5596 612 Pfam PF03600 Citrate transporter 436 610 2.6E-14 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 RB3960 97c2d2d0fb8659c9abc0dead6e4a5596 612 Pfam PF03600 Citrate transporter 36 221 8.3E-25 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 RB3960 97c2d2d0fb8659c9abc0dead6e4a5596 612 Gene3D G3DSA:3.30.70.1450 240 315 6.1E-15 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB3960 97c2d2d0fb8659c9abc0dead6e4a5596 612 Gene3D G3DSA:3.30.70.1450 332 399 8.2E-19 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB3960 97c2d2d0fb8659c9abc0dead6e4a5596 612 SUPERFAMILY SSF116726 324 400 5.23E-17 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB7906 26b6ac2064ed00ff8afcd016b13fdd51 232 Pfam PF03602 Conserved hypothetical protein 95 30 216 9.0E-33 T 11-11-2016 RB7906 26b6ac2064ed00ff8afcd016b13fdd51 232 Gene3D G3DSA:3.40.50.150 24 218 8.0E-40 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB7906 26b6ac2064ed00ff8afcd016b13fdd51 232 PIRSF PIRSF004553 29 219 2.2E-32 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RB7906 26b6ac2064ed00ff8afcd016b13fdd51 232 SUPERFAMILY SSF53335 30 214 2.11E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12180 cfd23bfdf87274dbf69994a223ac95ef 268 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 188 265 1.6E-20 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain RB12180 cfd23bfdf87274dbf69994a223ac95ef 268 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 5 265 3.2E-113 T 11-11-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 RB12180 cfd23bfdf87274dbf69994a223ac95ef 268 SUPERFAMILY SSF117143 93 227 2.35E-29 T 11-11-2016 RB12180 cfd23bfdf87274dbf69994a223ac95ef 268 Pfam PF00460 Flagella basal body rod protein 6 36 2.5E-13 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RB12180 cfd23bfdf87274dbf69994a223ac95ef 268 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 153 248 1.1E-28 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RB12180 cfd23bfdf87274dbf69994a223ac95ef 268 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 132 6.5E-43 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G RB12180 cfd23bfdf87274dbf69994a223ac95ef 268 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site RB10996 9e90be8953e94907a19c4056508c2905 428 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 69 2.8E-14 T 11-11-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RB10996 9e90be8953e94907a19c4056508c2905 428 Gene3D G3DSA:3.40.50.2000 5 278 9.6E-65 T 11-11-2016 RB10996 9e90be8953e94907a19c4056508c2905 428 SUPERFAMILY SSF53756 5 423 4.08E-96 T 11-11-2016 RB8026 9495ce92982cb6138f4240da647c7e01 352 Gene3D G3DSA:3.90.1580.10 31 352 1.1E-69 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB8026 9495ce92982cb6138f4240da647c7e01 352 Pfam PF03781 Sulfatase-modifying factor enzyme 1 41 351 1.3E-58 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB8026 9495ce92982cb6138f4240da647c7e01 352 SUPERFAMILY SSF56436 37 352 1.06E-67 T 11-11-2016 IPR016187 C-type lectin fold RB6363 da5eae0f7161cc95bf146348a69ad563 69 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.9E-17 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RB6363 da5eae0f7161cc95bf146348a69ad563 69 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 7.5E-13 T 11-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RB6932 1a569df4bdc6168cfde0c83797d8d177 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 314 1.1E-132 T 11-11-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RB6932 1a569df4bdc6168cfde0c83797d8d177 319 Gene3D G3DSA:3.40.50.1100 144 316 1.6E-80 T 11-11-2016 RB6932 1a569df4bdc6168cfde0c83797d8d177 319 SUPERFAMILY SSF53686 12 314 1.1E-104 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB6932 1a569df4bdc6168cfde0c83797d8d177 319 Gene3D G3DSA:3.40.50.1100 47 143 1.2E-37 T 11-11-2016 RB6932 1a569df4bdc6168cfde0c83797d8d177 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 302 1.1E-72 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RB6932 1a569df4bdc6168cfde0c83797d8d177 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 17 314 1.8E-136 T 11-11-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RB12251 79b2372df0edff1558502fb7acefbfaa 567 Gene3D G3DSA:1.10.1740.10 8 113 2.1E-26 T 11-11-2016 RB12251 79b2372df0edff1558502fb7acefbfaa 567 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 181 7.7E-27 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12251 79b2372df0edff1558502fb7acefbfaa 567 Pfam PF08281 Sigma-70, region 4 125 178 2.9E-9 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12251 79b2372df0edff1558502fb7acefbfaa 567 Gene3D G3DSA:1.10.10.10 119 183 1.0E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB12251 79b2372df0edff1558502fb7acefbfaa 567 Pfam PF04542 Sigma-70 region 2 28 95 2.4E-14 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12251 79b2372df0edff1558502fb7acefbfaa 567 SUPERFAMILY SSF88659 125 184 1.7E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB12251 79b2372df0edff1558502fb7acefbfaa 567 SUPERFAMILY SSF88946 3 107 5.1E-25 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB4864 a1ace0c02c8cfe718bd8a31295082d31 455 Pfam PF12704 MacB-like periplasmic core domain 18 238 1.6E-14 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB4864 a1ace0c02c8cfe718bd8a31295082d31 455 Pfam PF02687 FtsX-like permease family 331 447 9.7E-15 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB9555 7287bc34201e65a26b5c16cd50a7bec0 122 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 122 9.0E-48 T 11-11-2016 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 Gene3D G3DSA:1.25.40.10 258 459 1.6E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 Gene3D G3DSA:1.25.40.10 135 208 1.6E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 887 963 2.1E-7 T 11-11-2016 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 638 703 4.2E-11 T 11-11-2016 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 SUPERFAMILY SSF48452 258 386 5.06E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 SUPERFAMILY SSF48452 134 193 5.06E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 SUPERFAMILY SSF69318 571 975 6.02E-46 T 11-11-2016 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 Gene3D G3DSA:2.130.10.130 570 712 5.2E-13 T 11-11-2016 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 Gene3D G3DSA:2.130.10.130 755 986 2.8E-13 T 11-11-2016 RB9289 61adcf1b84ae7e7b57e2c55dd26903b6 1081 Pfam PF07593 ASPIC and UnbV 997 1058 1.0E-17 T 11-11-2016 IPR011519 ASPIC/UnbV RB702 2ae87813274c6ad189d4a00117c25409 79 SUPERFAMILY SSF53649 8 76 2.52E-7 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB702 2ae87813274c6ad189d4a00117c25409 79 Gene3D G3DSA:3.30.1120.10 40 76 8.8E-8 T 11-11-2016 RB475 bc248ed186712debea63ef930d3319d4 727 Pfam PF07622 Protein of unknown function (DUF1583) 570 716 3.9E-35 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB475 bc248ed186712debea63ef930d3319d4 727 Pfam PF07619 Protein of unknown function (DUF1581) 441 526 1.6E-30 T 11-11-2016 IPR022660 Domain of unknown function DUF1581 RB7824 b87f962dcfa4f0265c83db130973d6f2 186 Pfam PF10825 Protein of unknown function (DUF2752) 95 142 6.6E-13 T 11-11-2016 IPR021215 Protein of unknown function DUF2752 RB8846 a5b94d2bcc0ed1f666c22fee45d252fc 303 Gene3D G3DSA:3.50.50.60 48 92 1.3E-4 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1164 1fba4369ee27cdf73dc9b2d6df9b7ee4 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 128 5.3E-26 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RB11099 f2ebf85997176c119c171301cbf4f1a1 400 Pfam PF12821 Threonine/Serine exporter, ThrE 263 381 5.4E-11 T 11-11-2016 IPR024528 Threonine/Serine exporter, ThrE RB11099 f2ebf85997176c119c171301cbf4f1a1 400 Pfam PF06738 Putative threonine/serine exporter 1 232 1.6E-53 T 11-11-2016 IPR010619 Putative threonine/serine exporter RB7223 69440ea8e2efa5657796d6377db11555 377 Gene3D G3DSA:3.50.50.60 13 73 2.9E-12 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 Gene3D G3DSA:3.50.50.60 108 158 9.0E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 SUPERFAMILY SSF51905 18 64 5.52E-45 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 SUPERFAMILY SSF51905 111 362 5.52E-45 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 184 206 - T 11-11-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 Gene3D G3DSA:3.50.50.60 159 354 1.1E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 16 347 5.6E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 54 69 2.1E-36 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 287 308 2.1E-36 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 323 341 2.1E-36 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 16 38 2.1E-36 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 301 7.3E-36 T 11-11-2016 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 7.3E-36 T 11-11-2016 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 198 216 7.3E-36 T 11-11-2016 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 313 335 7.3E-36 T 11-11-2016 RB7223 69440ea8e2efa5657796d6377db11555 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 7.3E-36 T 11-11-2016 RB2990 4d17298df0fab2967a257374e3137d1d 758 Pfam PF00534 Glycosyl transferases group 1 188 360 1.3E-17 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB2990 4d17298df0fab2967a257374e3137d1d 758 Pfam PF13439 Glycosyltransferase Family 4 70 175 2.8E-8 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB2990 4d17298df0fab2967a257374e3137d1d 758 Gene3D G3DSA:3.40.50.2000 159 359 3.6E-10 T 11-11-2016 RB2990 4d17298df0fab2967a257374e3137d1d 758 SUPERFAMILY SSF48208 559 722 7.94E-7 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB2990 4d17298df0fab2967a257374e3137d1d 758 SUPERFAMILY SSF53756 10 380 1.73E-46 T 11-11-2016 RB12859 0a3fe50d828a9459a5ae5691d2efd3b8 361 Pfam PF00005 ABC transporter 51 209 9.5E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB12859 0a3fe50d828a9459a5ae5691d2efd3b8 361 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 259 335 1.6E-20 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RB12859 0a3fe50d828a9459a5ae5691d2efd3b8 361 Gene3D G3DSA:3.40.50.300 23 289 6.3E-79 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12859 0a3fe50d828a9459a5ae5691d2efd3b8 361 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 261 326 1.3E-15 T 11-11-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RB12859 0a3fe50d828a9459a5ae5691d2efd3b8 361 SUPERFAMILY SSF52540 30 279 5.33E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12859 0a3fe50d828a9459a5ae5691d2efd3b8 361 ProSitePatterns PS00211 ABC transporters family signature. 182 196 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RB12859 0a3fe50d828a9459a5ae5691d2efd3b8 361 SMART SM00382 59 259 6.2E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain RB6994 3be52cfcc681643c2e796bf20dcf478b 141 SUPERFAMILY SSF46785 4 131 1.29E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6994 3be52cfcc681643c2e796bf20dcf478b 141 Gene3D G3DSA:1.10.10.10 1 133 1.4E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6994 3be52cfcc681643c2e796bf20dcf478b 141 Pfam PF02082 Transcriptional regulator 1 84 3.7E-24 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type RB6994 3be52cfcc681643c2e796bf20dcf478b 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 1.8E-26 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type RB6389 ce0c1cea92d99cbeb031b73bb52a7e80 362 Hamap MF_01562 UPF0365 protein . 23 354 49.671 T 11-11-2016 IPR022853 Uncharacterised protein family YdfA-immunity RB6389 ce0c1cea92d99cbeb031b73bb52a7e80 362 Pfam PF12127 SigmaW regulon antibacterial 31 351 5.1E-146 T 11-11-2016 IPR022853 Uncharacterised protein family YdfA-immunity RB1930 77c17902a40bd0b7894b9befe89ee95d 182 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 152 174 7.9E-4 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB1930 77c17902a40bd0b7894b9befe89ee95d 182 Pfam PF07589 PEP-CTERM motif 151 172 1.4E-4 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB4823 ea32da0d19c6afa67cdf9195cc0b5e37 206 Pfam PF08695 Cytochrome oxidase complex assembly protein 1 84 194 3.9E-23 T 11-11-2016 IPR014807 Cytochrome oxidase assembly protein 1 RB9979 062e66f392fa57f07eaed706c6fa8b5f 739 SMART SM00534 547 739 4.0E-9 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RB9979 062e66f392fa57f07eaed706c6fa8b5f 739 SUPERFAMILY SSF52540 511 737 1.85E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9979 062e66f392fa57f07eaed706c6fa8b5f 739 Gene3D G3DSA:1.10.1420.10 233 283 7.3E-4 T 11-11-2016 RB9979 062e66f392fa57f07eaed706c6fa8b5f 739 Gene3D G3DSA:3.40.50.300 512 737 1.0E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9979 062e66f392fa57f07eaed706c6fa8b5f 739 Pfam PF00488 MutS domain V 551 736 6.3E-18 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RB1688 09bc84cf807c3e7fdc9a27513382a3d8 805 Gene3D G3DSA:2.40.50.100 634 672 5.4E-5 T 11-11-2016 RB1688 09bc84cf807c3e7fdc9a27513382a3d8 805 Gene3D G3DSA:2.40.50.100 551 581 5.4E-5 T 11-11-2016 RB1688 09bc84cf807c3e7fdc9a27513382a3d8 805 SUPERFAMILY SSF111369 553 700 1.57E-5 T 11-11-2016 RB16 a01683c533085aa25b79fec20d57ed7a 164 Pfam PF07628 Protein of unknown function (DUF1589) 1 164 2.0E-114 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB8848 f45c058ca923082613a1d9628bb895a5 242 Pfam PF13649 Methyltransferase domain 61 150 6.3E-12 T 11-11-2016 RB8848 f45c058ca923082613a1d9628bb895a5 242 SUPERFAMILY SSF53335 21 207 6.78E-23 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8848 f45c058ca923082613a1d9628bb895a5 242 Gene3D G3DSA:3.40.50.150 21 186 1.3E-18 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB7175 3c941a050ee25c81d046057b5cefba5d 203 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 33 198 33.415 T 11-11-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 RB7175 3c941a050ee25c81d046057b5cefba5d 203 Pfam PF01967 MoaC family 46 190 1.8E-49 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RB7175 3c941a050ee25c81d046057b5cefba5d 203 Gene3D G3DSA:3.30.70.640 36 198 6.9E-61 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RB7175 3c941a050ee25c81d046057b5cefba5d 203 SUPERFAMILY SSF55040 42 195 1.03E-52 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RB7175 3c941a050ee25c81d046057b5cefba5d 203 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 36 192 7.4E-56 T 11-11-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 RB9442 b5e57ceff2e8359fbf7243a4c4d9f78d 605 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 121 330 6.3E-10 T 11-11-2016 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 RB12877 5d27788df11dc3bb18bdf711e9f1a459 93 Pfam PF07628 Protein of unknown function (DUF1589) 33 75 5.9E-6 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB417 71a870e8f422efd8f5435a1e4cadd42d 314 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 11-11-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 RB417 71a870e8f422efd8f5435a1e4cadd42d 314 Gene3D G3DSA:3.90.245.10 1 307 1.4E-73 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB417 71a870e8f422efd8f5435a1e4cadd42d 314 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 289 1.7E-52 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB417 71a870e8f422efd8f5435a1e4cadd42d 314 SUPERFAMILY SSF53590 3 307 2.75E-71 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 Gene3D G3DSA:2.60.120.10 40 118 1.9E-5 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 SUPERFAMILY SSF51182 39 87 4.97E-6 T 11-11-2016 IPR011051 RmlC-like cupin domain RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 SUPERFAMILY SSF46689 193 244 5.82E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 Pfam PF12833 Helix-turn-helix domain 216 295 8.9E-20 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 Gene3D G3DSA:1.10.10.60 192 246 3.7E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 Gene3D G3DSA:1.10.10.60 247 295 2.5E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 SUPERFAMILY SSF46689 246 297 1.04E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB3345 fa1b36032590f2d7ae87e0a88ae0d534 300 SMART SM00342 210 293 7.4E-26 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RB10466 e02e3912dccf612d407382845a5f1e08 178 SUPERFAMILY SSF54637 19 155 4.78E-27 T 11-11-2016 IPR029069 HotDog domain RB10466 e02e3912dccf612d407382845a5f1e08 178 Pfam PF07977 FabA-like domain 30 153 9.9E-32 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RB10466 e02e3912dccf612d407382845a5f1e08 178 Gene3D G3DSA:3.10.129.10 15 155 1.1E-29 T 11-11-2016 IPR029069 HotDog domain RB4314 5aa345388057cddec5d3d64a58053a10 413 Pfam PF02687 FtsX-like permease family 291 405 1.6E-12 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB4314 5aa345388057cddec5d3d64a58053a10 413 Pfam PF12704 MacB-like periplasmic core domain 48 254 1.1E-12 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB1420 cb5ad64652b92814db02c7ae66e87085 350 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 34 221 4.5E-12 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB1420 cb5ad64652b92814db02c7ae66e87085 350 Gene3D G3DSA:3.90.245.10 32 232 7.0E-15 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB1420 cb5ad64652b92814db02c7ae66e87085 350 SUPERFAMILY SSF53590 32 310 3.92E-30 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB6289 757dc0b86b8e59c00bac976642facbaf 242 Gene3D G3DSA:3.40.50.1820 8 124 3.6E-30 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6289 757dc0b86b8e59c00bac976642facbaf 242 Gene3D G3DSA:3.40.50.1820 167 241 3.6E-30 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6289 757dc0b86b8e59c00bac976642facbaf 242 PRINTS PR00111 Alpha/beta hydrolase fold signature 38 53 1.3E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB6289 757dc0b86b8e59c00bac976642facbaf 242 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 1.3E-5 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB6289 757dc0b86b8e59c00bac976642facbaf 242 SUPERFAMILY SSF53474 8 123 3.67E-34 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6289 757dc0b86b8e59c00bac976642facbaf 242 SUPERFAMILY SSF53474 167 241 3.67E-34 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6289 757dc0b86b8e59c00bac976642facbaf 242 Pfam PF12146 Serine aminopeptidase, S33 27 117 5.6E-9 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 RB7263 ff703cd45ea433ec45c2c4e80c80a5dd 689 Gene3D G3DSA:1.10.710.10 278 356 8.1E-18 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB7263 ff703cd45ea433ec45c2c4e80c80a5dd 689 Gene3D G3DSA:1.10.710.10 153 244 8.1E-18 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB7263 ff703cd45ea433ec45c2c4e80c80a5dd 689 SUPERFAMILY SSF48695 153 239 1.57E-19 T 11-11-2016 IPR011031 Multihaem cytochrome RB7263 ff703cd45ea433ec45c2c4e80c80a5dd 689 SUPERFAMILY SSF48695 312 322 1.57E-19 T 11-11-2016 IPR011031 Multihaem cytochrome RB7263 ff703cd45ea433ec45c2c4e80c80a5dd 689 SUPERFAMILY SSF48695 155 409 1.36E-11 T 11-11-2016 IPR011031 Multihaem cytochrome RB7263 ff703cd45ea433ec45c2c4e80c80a5dd 689 Pfam PF13435 Cytochrome c554 and c-prime 158 239 1.9E-9 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6698 9dad6d3f57105f70878d00e645e62c0a 279 Pfam PF00805 Pentapeptide repeats (8 copies) 66 103 1.7E-7 T 11-11-2016 IPR001646 Pentapeptide repeat RB6698 9dad6d3f57105f70878d00e645e62c0a 279 SUPERFAMILY SSF141571 29 105 9.16E-13 T 11-11-2016 RB2998 a0809e2a960b29963c076270eb118ad3 384 SUPERFAMILY SSF48239 141 364 3.77E-27 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB2998 a0809e2a960b29963c076270eb118ad3 384 Gene3D G3DSA:1.50.10.20 147 362 1.7E-21 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB5540 74eb4f1682735b3147494df0862325e1 255 Gene3D G3DSA:3.40.50.10320 20 247 2.8E-44 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB5540 74eb4f1682735b3147494df0862325e1 255 SUPERFAMILY SSF102588 21 248 1.1E-44 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB5540 74eb4f1682735b3147494df0862325e1 255 Pfam PF02585 GlcNAc-PI de-N-acetylase 25 143 2.3E-15 T 11-11-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RB7200 14a7b914d37aedccd40fa27a2a798c66 1335 Gene3D G3DSA:3.40.30.10 1188 1315 3.8E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold RB7200 14a7b914d37aedccd40fa27a2a798c66 1335 SUPERFAMILY SSF52833 1190 1294 9.84E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold RB7200 14a7b914d37aedccd40fa27a2a798c66 1335 Pfam PF13899 Thioredoxin-like 1198 1282 1.9E-12 T 11-11-2016 RB7200 14a7b914d37aedccd40fa27a2a798c66 1335 Pfam PF05569 BlaR1 peptidase M56 23 349 4.0E-29 T 11-11-2016 IPR008756 Peptidase M56 RB7200 14a7b914d37aedccd40fa27a2a798c66 1335 Gene3D G3DSA:3.30.2010.10 234 274 7.7E-4 T 11-11-2016 RB9480 f497b5582805cb03845f86186c311c29 264 SUPERFAMILY SSF54523 47 157 4.47E-11 T 11-11-2016 RB9480 f497b5582805cb03845f86186c311c29 264 Pfam PF07596 Protein of unknown function (DUF1559) 63 208 1.7E-44 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB9480 f497b5582805cb03845f86186c311c29 264 Pfam PF07596 Protein of unknown function (DUF1559) 226 248 3.2E-4 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5392 74f2ea9f4e73cb14d623d706744f08f9 371 Gene3D G3DSA:3.40.50.720 90 272 6.7E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5392 74f2ea9f4e73cb14d623d706744f08f9 371 SUPERFAMILY SSF48179 267 368 5.1E-24 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB5392 74f2ea9f4e73cb14d623d706744f08f9 371 SUPERFAMILY SSF51735 99 262 2.41E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB5392 74f2ea9f4e73cb14d623d706744f08f9 371 Pfam PF02153 Prephenate dehydrogenase 111 359 3.3E-54 T 11-11-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RB2485 26a7a25edb7751bdc763f6864e23cbf5 400 Gene3D G3DSA:3.40.50.2000 210 373 1.0E-16 T 11-11-2016 RB2485 26a7a25edb7751bdc763f6864e23cbf5 400 SUPERFAMILY SSF53756 23 394 6.98E-54 T 11-11-2016 RB2485 26a7a25edb7751bdc763f6864e23cbf5 400 Pfam PF13692 Glycosyl transferases group 1 214 362 2.4E-22 T 11-11-2016 RB13107 854e904e589afa9769410f9be893141f 242 Pfam PF14559 Tetratricopeptide repeat 108 169 1.1E-7 T 11-11-2016 RB13107 854e904e589afa9769410f9be893141f 242 SUPERFAMILY SSF48452 61 220 1.78E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB13107 854e904e589afa9769410f9be893141f 242 Pfam PF07721 Tetratricopeptide repeat 193 217 0.011 T 11-11-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 RB13107 854e904e589afa9769410f9be893141f 242 Gene3D G3DSA:1.25.40.10 67 220 1.4E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12323 075b016bafa53f3d1aae3b1db3fa4ddb 248 SUPERFAMILY SSF50346 14 128 6.47E-26 T 11-11-2016 IPR011033 PRC-barrel-like RB12323 075b016bafa53f3d1aae3b1db3fa4ddb 248 SUPERFAMILY SSF50346 149 240 1.08E-17 T 11-11-2016 IPR011033 PRC-barrel-like RB12323 075b016bafa53f3d1aae3b1db3fa4ddb 248 Gene3D G3DSA:3.90.50.10 26 113 1.3E-5 T 11-11-2016 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 RB2632 8ad4fac68cb1af6c751b4dc1d6d0e048 295 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 27 269 1.3E-28 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RB2632 8ad4fac68cb1af6c751b4dc1d6d0e048 295 SUPERFAMILY SSF53067 28 159 1.27E-5 T 11-11-2016 RB2632 8ad4fac68cb1af6c751b4dc1d6d0e048 295 Hamap MF_01274 Type III pantothenate kinase [coaX]. 24 295 17.482 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RB2632 8ad4fac68cb1af6c751b4dc1d6d0e048 295 Gene3D G3DSA:3.30.420.40 135 292 3.2E-35 T 11-11-2016 RB2632 8ad4fac68cb1af6c751b4dc1d6d0e048 295 Pfam PF03309 Type III pantothenate kinase 28 249 1.2E-36 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RB2632 8ad4fac68cb1af6c751b4dc1d6d0e048 295 SUPERFAMILY SSF53067 163 289 7.45E-25 T 11-11-2016 RB9136 5e89dc9655c0024279917fb8d2bb85b8 597 Gene3D G3DSA:3.20.20.80 224 568 3.9E-51 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB9136 5e89dc9655c0024279917fb8d2bb85b8 597 SUPERFAMILY SSF51445 235 545 1.91E-61 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB9136 5e89dc9655c0024279917fb8d2bb85b8 597 SMART SM00633 290 531 0.0047 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 RB9136 5e89dc9655c0024279917fb8d2bb85b8 597 Pfam PF00331 Glycosyl hydrolase family 10 300 518 2.6E-25 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 RB3433 a06bcb0b38c438a592b12cdc67ce4f56 155 SUPERFAMILY SSF46767 63 134 6.67E-14 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RB3433 a06bcb0b38c438a592b12cdc67ce4f56 155 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 65 134 1.8E-13 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RB3433 a06bcb0b38c438a592b12cdc67ce4f56 155 Gene3D G3DSA:1.10.10.10 63 141 5.5E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB6590 2bb32fdf873658d34d0eebed580d15c5 820 Gene3D G3DSA:3.40.50.300 288 421 5.8E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6590 2bb32fdf873658d34d0eebed580d15c5 820 Gene3D G3DSA:3.40.50.300 36 108 5.8E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6590 2bb32fdf873658d34d0eebed580d15c5 820 SUPERFAMILY SSF52540 154 463 1.68E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6590 2bb32fdf873658d34d0eebed580d15c5 820 SUPERFAMILY SSF52540 40 97 1.68E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12489 aeb8bad071eb3d9cb09ebb0a1bf5023b 353 Gene3D G3DSA:2.60.40.360 148 247 2.2E-8 T 11-11-2016 IPR008962 PapD-like RB12489 aeb8bad071eb3d9cb09ebb0a1bf5023b 353 Gene3D G3DSA:2.60.40.360 45 142 6.2E-16 T 11-11-2016 IPR008962 PapD-like RB12489 aeb8bad071eb3d9cb09ebb0a1bf5023b 353 Pfam PF07610 Protein of unknown function (DUF1573) 68 111 1.4E-13 T 11-11-2016 IPR011467 Protein of unknown function DUF1573 RB1717 9311fe82cc587d0f09e507b26549ce64 541 Pfam PF13777 Domain of unknown function (DUF4173) 275 441 5.5E-23 T 11-11-2016 IPR025231 Domain of unknown function DUF4173 RB5991 0df21de022b86c86ab1c86bbdb462b1e 374 Pfam PF13439 Glycosyltransferase Family 4 15 169 9.1E-19 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB5991 0df21de022b86c86ab1c86bbdb462b1e 374 Gene3D G3DSA:3.40.50.2000 191 344 1.2E-24 T 11-11-2016 RB5991 0df21de022b86c86ab1c86bbdb462b1e 374 SUPERFAMILY SSF53756 2 370 1.1E-75 T 11-11-2016 RB5991 0df21de022b86c86ab1c86bbdb462b1e 374 Pfam PF00534 Glycosyl transferases group 1 196 344 4.4E-37 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB4971 80a9a6b2c9b73decf5b98ac0e7f5c84d 654 Pfam PF14311 Probable Zinc-ribbon domain 92 147 3.2E-16 T 11-11-2016 IPR025487 Probable Zinc-ribbon domain RB4971 80a9a6b2c9b73decf5b98ac0e7f5c84d 654 Pfam PF14311 Probable Zinc-ribbon domain 21 76 1.3E-14 T 11-11-2016 IPR025487 Probable Zinc-ribbon domain RB4971 80a9a6b2c9b73decf5b98ac0e7f5c84d 654 Pfam PF14311 Probable Zinc-ribbon domain 241 297 3.1E-13 T 11-11-2016 IPR025487 Probable Zinc-ribbon domain RB4971 80a9a6b2c9b73decf5b98ac0e7f5c84d 654 Pfam PF14311 Probable Zinc-ribbon domain 317 372 4.3E-17 T 11-11-2016 IPR025487 Probable Zinc-ribbon domain RB4971 80a9a6b2c9b73decf5b98ac0e7f5c84d 654 Pfam PF14311 Probable Zinc-ribbon domain 389 443 9.0E-15 T 11-11-2016 IPR025487 Probable Zinc-ribbon domain RB4971 80a9a6b2c9b73decf5b98ac0e7f5c84d 654 Pfam PF14311 Probable Zinc-ribbon domain 159 215 2.5E-15 T 11-11-2016 IPR025487 Probable Zinc-ribbon domain RB1653 cfba3fc49cdc7fac7c4e186c1339490e 510 Pfam PF04820 Tryptophan halogenase 277 414 3.2E-8 T 11-11-2016 IPR006905 Tryptophan halogenase RB1653 cfba3fc49cdc7fac7c4e186c1339490e 510 Gene3D G3DSA:3.50.50.60 335 379 4.9E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1653 cfba3fc49cdc7fac7c4e186c1339490e 510 Gene3D G3DSA:3.50.50.60 114 229 4.9E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1653 cfba3fc49cdc7fac7c4e186c1339490e 510 Gene3D G3DSA:3.50.50.60 10 70 4.9E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1653 cfba3fc49cdc7fac7c4e186c1339490e 510 SUPERFAMILY SSF51905 341 418 5.05E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1653 cfba3fc49cdc7fac7c4e186c1339490e 510 SUPERFAMILY SSF51905 10 229 5.05E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1653 cfba3fc49cdc7fac7c4e186c1339490e 510 Pfam PF01266 FAD dependent oxidoreductase 14 211 1.7E-6 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RB10549 526c5ff53904b4fc0096ed528bf417b2 297 SUPERFAMILY SSF56300 9 246 7.16E-29 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10549 526c5ff53904b4fc0096ed528bf417b2 297 Gene3D G3DSA:3.60.21.10 198 258 1.0E-24 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10549 526c5ff53904b4fc0096ed528bf417b2 297 Gene3D G3DSA:3.60.21.10 12 148 1.0E-24 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10549 526c5ff53904b4fc0096ed528bf417b2 297 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 14 221 1.2E-12 T 11-11-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RB11392 5059c9dd8593f8388eaaf5b9aff5bdb6 148 Pfam PF13470 PIN domain 8 120 2.2E-16 T 11-11-2016 IPR002716 PIN domain RB11392 5059c9dd8593f8388eaaf5b9aff5bdb6 148 SUPERFAMILY SSF88723 7 126 4.77E-8 T 11-11-2016 IPR029060 PIN domain-like RB9567 3e7647d7214a181908905d3486996e1a 156 Gene3D G3DSA:3.10.450.50 12 154 8.8E-70 T 11-11-2016 IPR032710 NTF2-like domain RB9567 3e7647d7214a181908905d3486996e1a 156 Pfam PF07080 Protein of unknown function (DUF1348) 7 145 3.7E-69 T 11-11-2016 IPR009783 Protein of unknown function DUF1348 RB9567 3e7647d7214a181908905d3486996e1a 156 SUPERFAMILY SSF54427 7 154 1.18E-71 T 11-11-2016 IPR032710 NTF2-like domain RB2090 e7c686ff5bc905b1b6907ea1dba4e5d2 111 Gene3D G3DSA:3.30.1390.10 43 84 1.1E-4 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RB2498 52e7bdf6402ca7fa3b11878ceb3575a1 296 Gene3D G3DSA:3.40.50.150 72 266 5.6E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2498 52e7bdf6402ca7fa3b11878ceb3575a1 296 SUPERFAMILY SSF53335 8 263 7.06E-59 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2498 52e7bdf6402ca7fa3b11878ceb3575a1 296 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 90 231 1.2E-34 T 11-11-2016 IPR006342 Methyltransferase FkbM RB2498 52e7bdf6402ca7fa3b11878ceb3575a1 296 Pfam PF05050 Methyltransferase FkbM domain 93 257 6.4E-23 T 11-11-2016 IPR006342 Methyltransferase FkbM RB8828 e9ae5d27765f7164d5a25da554e8591d 552 SUPERFAMILY SSF161098 286 533 4.71E-15 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB8828 e9ae5d27765f7164d5a25da554e8591d 552 SUPERFAMILY SSF161098 51 256 1.11E-15 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB8828 e9ae5d27765f7164d5a25da554e8591d 552 Gene3D G3DSA:1.10.3720.10 54 257 8.8E-15 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB8828 e9ae5d27765f7164d5a25da554e8591d 552 Gene3D G3DSA:1.10.3720.10 286 533 9.6E-12 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB12658 bcc0d22ab849aa35ddac9c012a56b301 196 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.5E-82 T 11-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 RB12658 bcc0d22ab849aa35ddac9c012a56b301 196 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 196 39.967 T 11-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 RB12658 bcc0d22ab849aa35ddac9c012a56b301 196 SUPERFAMILY SSF52016 1 194 4.51E-57 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RB12658 bcc0d22ab849aa35ddac9c012a56b301 196 Pfam PF00694 Aconitase C-terminal domain 1 124 7.4E-34 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 RB12658 bcc0d22ab849aa35ddac9c012a56b301 196 Gene3D G3DSA:3.20.19.10 1 193 2.2E-47 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RB8149 782bcdeb2f28e0b008bc7e762049455d 70 Hamap MF_00167 Carbon storage regulator [csrA]. 1 70 20.309 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB8149 782bcdeb2f28e0b008bc7e762049455d 70 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-25 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB8149 782bcdeb2f28e0b008bc7e762049455d 70 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-11 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB8149 782bcdeb2f28e0b008bc7e762049455d 70 SUPERFAMILY SSF117130 1 55 6.41E-20 T 11-11-2016 RB8149 782bcdeb2f28e0b008bc7e762049455d 70 Pfam PF02599 Global regulator protein family 1 52 6.0E-26 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB9751 0177413d9154cdfc37704f600a3657d1 311 Pfam PF06283 Trehalose utilisation 77 285 2.4E-13 T 11-11-2016 IPR029010 ThuA-like domain RB9751 0177413d9154cdfc37704f600a3657d1 311 Gene3D G3DSA:3.40.50.880 48 298 3.0E-22 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9751 0177413d9154cdfc37704f600a3657d1 311 SUPERFAMILY SSF52317 50 298 3.97E-27 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB11913 4f2fdcee212448cf83c56b1cefa6b604 338 SUPERFAMILY SSF52540 36 312 2.02E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11913 4f2fdcee212448cf83c56b1cefa6b604 338 Gene3D G3DSA:3.40.50.300 49 211 1.0E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11913 4f2fdcee212448cf83c56b1cefa6b604 338 Gene3D G3DSA:1.10.8.300 227 334 2.1E-28 T 11-11-2016 RB11913 4f2fdcee212448cf83c56b1cefa6b604 338 PIRSF PIRSF002849 5 338 4.7E-124 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted RB11913 4f2fdcee212448cf83c56b1cefa6b604 338 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 67 196 8.7E-59 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RB7879 6ce0082d46daf3a010b170f218f3d399 484 Gene3D G3DSA:3.30.1120.10 391 470 2.3E-14 T 11-11-2016 RB7879 6ce0082d46daf3a010b170f218f3d399 484 SUPERFAMILY SSF53649 37 468 2.33E-123 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7879 6ce0082d46daf3a010b170f218f3d399 484 Gene3D G3DSA:3.40.720.10 37 388 3.0E-104 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7879 6ce0082d46daf3a010b170f218f3d399 484 Pfam PF00884 Sulfatase 39 367 8.1E-74 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB5406 cc711ad0e640233a78d8eb3999bcc4f2 561 SUPERFAMILY SSF53067 324 555 1.57E-38 T 11-11-2016 RB5406 cc711ad0e640233a78d8eb3999bcc4f2 561 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 66 312 1.6E-28 T 11-11-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RB5406 cc711ad0e640233a78d8eb3999bcc4f2 561 Gene3D G3DSA:3.30.420.40 326 558 4.0E-23 T 11-11-2016 RB5406 cc711ad0e640233a78d8eb3999bcc4f2 561 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 328 517 6.2E-34 T 11-11-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RB5406 cc711ad0e640233a78d8eb3999bcc4f2 561 SUPERFAMILY SSF53067 66 314 9.5E-47 T 11-11-2016 RB5406 cc711ad0e640233a78d8eb3999bcc4f2 561 Gene3D G3DSA:3.30.420.40 62 310 2.9E-28 T 11-11-2016 RB4011 319ba70f208f8d987620722cb29e3821 277 Gene3D G3DSA:3.40.30.10 120 276 4.2E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4011 319ba70f208f8d987620722cb29e3821 277 Gene3D G3DSA:3.40.30.10 26 43 4.2E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold RB4011 319ba70f208f8d987620722cb29e3821 277 Pfam PF00578 AhpC/TSA family 127 250 1.5E-5 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB4011 319ba70f208f8d987620722cb29e3821 277 SUPERFAMILY SSF52833 143 257 2.53E-17 T 11-11-2016 IPR012336 Thioredoxin-like fold RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 7 206 1.4E-55 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 Gene3D G3DSA:3.10.290.10 101 195 5.2E-21 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 5 206 30.009 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 7 96 1.0E-22 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 SUPERFAMILY SSF55174 7 206 2.0E-51 T 11-11-2016 RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 Pfam PF01479 S4 domain 97 144 4.6E-18 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 Gene3D G3DSA:1.10.1050.10 5 100 2.6E-31 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 SMART SM00363 97 164 7.0E-17 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 RB1233 16f0b3ea5f7a2b5978174078dbdaddef 206 SMART SM01390 7 96 4.0E-34 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 RB13026 b940afa2367ca9be8f42db7717281794 197 SUPERFAMILY SSF51905 26 190 1.94E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB13026 b940afa2367ca9be8f42db7717281794 197 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 171 186 1.5E-5 T 11-11-2016 RB13026 b940afa2367ca9be8f42db7717281794 197 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 27 49 1.5E-5 T 11-11-2016 RB13026 b940afa2367ca9be8f42db7717281794 197 Pfam PF01494 FAD binding domain 26 191 8.3E-9 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 RB13026 b940afa2367ca9be8f42db7717281794 197 Gene3D G3DSA:3.50.50.60 25 191 6.9E-22 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB4629 8016c53c9daf259fd136594cc97b7ce3 92 Pfam PF06865 Protein of unknown function (DUF1255) 2 91 5.6E-32 T 11-11-2016 IPR009664 Protein of unknown function DUF1255 RB4629 8016c53c9daf259fd136594cc97b7ce3 92 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 92 21.387 T 11-11-2016 IPR009664 Protein of unknown function DUF1255 RB4629 8016c53c9daf259fd136594cc97b7ce3 92 SUPERFAMILY SSF51182 2 91 3.85E-31 T 11-11-2016 IPR011051 RmlC-like cupin domain RB4629 8016c53c9daf259fd136594cc97b7ce3 92 Gene3D G3DSA:2.60.120.10 2 92 4.8E-35 T 11-11-2016 IPR014710 RmlC-like jelly roll fold RB3556 d5cfa283b3320ef8b5936d9d1ee44b29 637 SUPERFAMILY SSF102588 437 623 4.58E-45 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB3556 d5cfa283b3320ef8b5936d9d1ee44b29 637 SUPERFAMILY SSF102588 352 392 4.58E-45 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB3556 d5cfa283b3320ef8b5936d9d1ee44b29 637 Gene3D G3DSA:3.40.50.1360 20 280 6.9E-88 T 11-11-2016 RB3556 d5cfa283b3320ef8b5936d9d1ee44b29 637 Pfam PF02585 GlcNAc-PI de-N-acetylase 357 532 2.3E-16 T 11-11-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RB3556 d5cfa283b3320ef8b5936d9d1ee44b29 637 SUPERFAMILY SSF100950 20 270 1.83E-83 T 11-11-2016 RB3556 d5cfa283b3320ef8b5936d9d1ee44b29 637 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 27 249 8.5E-19 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RB3556 d5cfa283b3320ef8b5936d9d1ee44b29 637 Gene3D G3DSA:3.40.50.10320 436 633 4.8E-61 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB3556 d5cfa283b3320ef8b5936d9d1ee44b29 637 Gene3D G3DSA:3.40.50.10320 352 392 4.8E-61 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SUPERFAMILY SSF51126 3803 4071 1.36E-8 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SUPERFAMILY SSF51126 4102 4109 1.36E-8 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 Pfam PF00404 Dockerin type I repeat 7352 7372 7.4E-6 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 Pfam PF13229 Right handed beta helix region 3938 4034 4.7E-6 T 11-11-2016 RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SUPERFAMILY SSF51126 1058 1103 1.46E-5 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SUPERFAMILY SSF51126 737 805 1.46E-5 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SUPERFAMILY SSF51126 898 1025 1.46E-5 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 3968 3991 610.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 3879 3901 6700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 4401 4422 3300.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 1001 1023 1400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 3934 3956 67.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 1456 1478 65.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 1418 1439 610.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 3150 3179 1900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 77 99 8400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 954 976 1900.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 1505 1527 1700.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 SMART SM00710 3992 4013 89.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 Gene3D G3DSA:2.60.120.380 1796 1843 4.4E-4 T 11-11-2016 RB7341 dced1188b35fc9f832b60ee2c174cb00 7538 Gene3D G3DSA:2.60.120.380 1674 1757 4.4E-4 T 11-11-2016 RB5516 711321ff62f0b3dfe819d587eacb2735 243 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 41 2.0E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5516 711321ff62f0b3dfe819d587eacb2735 243 SUPERFAMILY SSF54523 21 97 1.41E-8 T 11-11-2016 RB7512 81e6e440ca5cdc7dadc8f19bf476d214 507 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 462 1.1E-65 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB7512 81e6e440ca5cdc7dadc8f19bf476d214 507 Pfam PF00474 Sodium:solute symporter family 35 462 4.2E-43 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB6291 050fd4e3c6ec386e9b973a8ae2a252df 345 Hamap MF_01562 UPF0365 protein . 25 345 45.947 T 11-11-2016 IPR022853 Uncharacterised protein family YdfA-immunity RB6291 050fd4e3c6ec386e9b973a8ae2a252df 345 Pfam PF12127 SigmaW regulon antibacterial 37 334 8.2E-126 T 11-11-2016 IPR022853 Uncharacterised protein family YdfA-immunity RB5424 8bd443eb00ced94d612073142dca0f9d 573 Gene3D G3DSA:3.30.1120.10 503 570 6.3E-14 T 11-11-2016 RB5424 8bd443eb00ced94d612073142dca0f9d 573 SUPERFAMILY SSF53649 508 569 7.07E-114 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5424 8bd443eb00ced94d612073142dca0f9d 573 SUPERFAMILY SSF53649 231 461 7.07E-114 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5424 8bd443eb00ced94d612073142dca0f9d 573 SUPERFAMILY SSF53649 61 203 7.07E-114 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5424 8bd443eb00ced94d612073142dca0f9d 573 Gene3D G3DSA:3.40.720.10 61 446 1.5E-96 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5424 8bd443eb00ced94d612073142dca0f9d 573 Pfam PF00884 Sulfatase 64 426 2.0E-52 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB9424 78aa6b04c06d8781b66f00604efe1191 388 SUPERFAMILY SSF53300 173 316 4.45E-11 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9424 78aa6b04c06d8781b66f00604efe1191 388 Pfam PF01882 Protein of unknown function DUF58 138 218 1.1E-16 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB9015 99302f5875edab3e0702fb9734109700 62 Pfam PF07625 Protein of unknown function (DUF1586) 33 52 4.1E-13 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB10826 7b694bd0ed81e08093adc57e592d0b20 227 Gene3D G3DSA:3.90.226.10 35 216 1.8E-73 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB10826 7b694bd0ed81e08093adc57e592d0b20 227 PRINTS PR00127 Clp protease catalytic subunit P signature 85 105 2.6E-41 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10826 7b694bd0ed81e08093adc57e592d0b20 227 PRINTS PR00127 Clp protease catalytic subunit P signature 45 60 2.6E-41 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10826 7b694bd0ed81e08093adc57e592d0b20 227 PRINTS PR00127 Clp protease catalytic subunit P signature 137 156 2.6E-41 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10826 7b694bd0ed81e08093adc57e592d0b20 227 PRINTS PR00127 Clp protease catalytic subunit P signature 194 213 2.6E-41 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10826 7b694bd0ed81e08093adc57e592d0b20 227 PRINTS PR00127 Clp protease catalytic subunit P signature 116 133 2.6E-41 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10826 7b694bd0ed81e08093adc57e592d0b20 227 Pfam PF00574 Clp protease 41 215 6.0E-72 T 11-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RB10826 7b694bd0ed81e08093adc57e592d0b20 227 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 29 219 36.688 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RB10826 7b694bd0ed81e08093adc57e592d0b20 227 SUPERFAMILY SSF52096 41 216 3.73E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB10826 7b694bd0ed81e08093adc57e592d0b20 227 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 138 151 - T 11-11-2016 IPR033135 ClpP, histidine active site RB9704 a398ad6d21b3740313e0b271e90ae0a0 1463 ProSitePatterns PS00018 EF-hand calcium-binding domain. 249 261 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB4564 eb504df26b07ac18a91f3601a1f7f12d 602 Pfam PF00474 Sodium:solute symporter family 36 449 1.9E-33 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB10653 6a466b097b19e7fce26a48a4b8c828b3 413 SUPERFAMILY SSF53383 23 400 6.2E-82 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB10653 6a466b097b19e7fce26a48a4b8c828b3 413 Gene3D G3DSA:3.40.640.10 53 290 2.4E-61 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB10653 6a466b097b19e7fce26a48a4b8c828b3 413 Gene3D G3DSA:3.90.1150.10 291 400 1.7E-12 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB10653 6a466b097b19e7fce26a48a4b8c828b3 413 Pfam PF00266 Aminotransferase class-V 39 395 1.5E-51 T 11-11-2016 IPR000192 Aminotransferase class V domain RB7962 55ac91e9a2f2d435104a76a203491ba4 173 Gene3D G3DSA:4.10.860.10 128 163 9.9E-8 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB7962 55ac91e9a2f2d435104a76a203491ba4 173 PIRSF PIRSF015034 1 172 8.0E-34 T 11-11-2016 IPR025542 YacH protein RB7962 55ac91e9a2f2d435104a76a203491ba4 173 Pfam PF02151 UvrB/uvrC motif 134 164 2.6E-11 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB7962 55ac91e9a2f2d435104a76a203491ba4 173 SUPERFAMILY SSF46600 130 163 6.54E-7 T 11-11-2016 IPR001943 UVR domain GO:0005515 RB10292 56523cbecc2f8efd7adf522c587269f8 581 Pfam PF07639 YTV 170 210 1.9E-6 T 11-11-2016 IPR011521 YTV RB10292 56523cbecc2f8efd7adf522c587269f8 581 Pfam PF07639 YTV 142 180 1.5E-4 T 11-11-2016 IPR011521 YTV RB1637 f0726281e887b1f722b8d72526ec1fed 219 Gene3D G3DSA:3.90.550.10 10 202 3.2E-16 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB1637 f0726281e887b1f722b8d72526ec1fed 219 SUPERFAMILY SSF53448 10 211 8.0E-32 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB1637 f0726281e887b1f722b8d72526ec1fed 219 Pfam PF00535 Glycosyl transferase family 2 9 149 8.1E-20 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB9113 6e6577f05a89da4bd254bd63656f143b 190 Pfam PF01965 DJ-1/PfpI family 2 184 5.7E-49 T 11-11-2016 IPR002818 DJ-1/PfpI RB9113 6e6577f05a89da4bd254bd63656f143b 190 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 187 4.2E-51 T 11-11-2016 IPR006286 Peptidase C56, PfpI RB9113 6e6577f05a89da4bd254bd63656f143b 190 Gene3D G3DSA:3.40.50.880 1 186 1.3E-56 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9113 6e6577f05a89da4bd254bd63656f143b 190 SUPERFAMILY SSF52317 1 187 4.87E-51 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8388 a71a6b26d6905e732baa8d277cb33ab2 306 SUPERFAMILY SSF53448 20 281 4.5E-20 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB8388 a71a6b26d6905e732baa8d277cb33ab2 306 Gene3D G3DSA:3.90.550.10 111 294 1.0E-4 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB8792 153583d0db2b6a9e6feec89196d14f7d 451 Pfam PF12566 Protein of unknown function (DUF3748) 70 191 5.1E-52 T 11-11-2016 IPR022223 Protein of unknown function DUF3748 RB8792 153583d0db2b6a9e6feec89196d14f7d 451 SUPERFAMILY SSF82171 307 430 1.69E-14 T 11-11-2016 RB8792 153583d0db2b6a9e6feec89196d14f7d 451 SUPERFAMILY SSF82171 23 165 1.69E-14 T 11-11-2016 RB8792 153583d0db2b6a9e6feec89196d14f7d 451 Gene3D G3DSA:2.130.10.10 4 92 5.2E-5 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB8792 153583d0db2b6a9e6feec89196d14f7d 451 Gene3D G3DSA:2.130.10.10 301 436 9.8E-15 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB9860 7a83bc16b583053a345331064ab2bc20 335 Gene3D G3DSA:3.20.20.140 57 334 4.4E-71 T 11-11-2016 RB9860 7a83bc16b583053a345331064ab2bc20 335 SUPERFAMILY SSF51556 59 334 1.26E-66 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB9860 7a83bc16b583053a345331064ab2bc20 335 Pfam PF04909 Amidohydrolase 60 333 5.7E-40 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB4934 c31be1ba50e88ab114f69d5ad5571813 302 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 8 278 2.5E-74 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RB4934 c31be1ba50e88ab114f69d5ad5571813 302 Gene3D G3DSA:3.30.230.20 7 127 9.2E-33 T 11-11-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RB4934 c31be1ba50e88ab114f69d5ad5571813 302 Gene3D G3DSA:3.30.1700.10 132 279 5.7E-33 T 11-11-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RB4934 c31be1ba50e88ab114f69d5ad5571813 302 SUPERFAMILY SSF54211 138 278 9.86E-28 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB4934 c31be1ba50e88ab114f69d5ad5571813 302 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 7 278 6.6E-60 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 RB4934 c31be1ba50e88ab114f69d5ad5571813 302 SUPERFAMILY SSF54211 6 126 4.85E-31 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB4216 9b63c30702adb070049e36ebf03a9392 76 Pfam PF07618 Protein of unknown function (DUF1580) 22 76 1.3E-27 T 11-11-2016 IPR011474 Protein of unknown function DUF1580 RB12459 f7330287f0ead4361269c9c8b6f0c675 316 SUPERFAMILY SSF158668 136 273 3.53E-38 T 11-11-2016 RB12459 f7330287f0ead4361269c9c8b6f0c675 316 Gene3D G3DSA:1.20.120.330 120 297 1.8E-49 T 11-11-2016 RB12459 f7330287f0ead4361269c9c8b6f0c675 316 Pfam PF05068 Mannitol repressor 154 255 3.5E-11 T 11-11-2016 IPR007761 Mannitol repressor RB8851 372aa3195ebfdd5b23a03082f2a846f1 287 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 106 281 9.6E-21 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RB8851 372aa3195ebfdd5b23a03082f2a846f1 287 Gene3D G3DSA:3.90.850.10 72 283 1.0E-31 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RB8851 372aa3195ebfdd5b23a03082f2a846f1 287 SUPERFAMILY SSF56529 64 283 2.75E-34 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RB12089 a9367f8b9d2ef7baa4a1e4d05ecafdad 505 Gene3D G3DSA:3.40.720.10 44 406 2.7E-98 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12089 a9367f8b9d2ef7baa4a1e4d05ecafdad 505 Pfam PF00884 Sulfatase 46 389 4.3E-56 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB12089 a9367f8b9d2ef7baa4a1e4d05ecafdad 505 SUPERFAMILY SSF53649 45 488 9.6E-113 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB12089 a9367f8b9d2ef7baa4a1e4d05ecafdad 505 Gene3D G3DSA:3.30.1120.10 434 486 2.3E-11 T 11-11-2016 RB1274 cbd524549db7cf64c695616faac40a8e 476 SUPERFAMILY SSF51395 38 440 6.54E-52 T 11-11-2016 RB1274 cbd524549db7cf64c695616faac40a8e 476 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 138 270 3.4E-18 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RB1274 cbd524549db7cf64c695616faac40a8e 476 Gene3D G3DSA:3.20.20.70 34 464 3.1E-63 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB7235 ff733cd236bfe11811603d11e89a8caa 264 Pfam PF07978 NIPSNAP 160 263 7.5E-18 T 11-11-2016 IPR012577 NIPSNAP RB7235 ff733cd236bfe11811603d11e89a8caa 264 Gene3D G3DSA:3.30.70.900 152 238 3.3E-4 T 11-11-2016 RB7235 ff733cd236bfe11811603d11e89a8caa 264 SUPERFAMILY SSF54909 154 261 5.36E-10 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB7235 ff733cd236bfe11811603d11e89a8caa 264 SUPERFAMILY SSF54909 45 144 1.47E-5 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB8152 6864876bfea788df867ed2fdd9be84ba 124 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 32 50 - T 11-11-2016 IPR030489 Transcription regulator Rrf2-type, conserved site RB8152 6864876bfea788df867ed2fdd9be84ba 124 Gene3D G3DSA:1.10.10.10 4 115 3.2E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8152 6864876bfea788df867ed2fdd9be84ba 124 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 6 113 8.0E-25 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type RB8152 6864876bfea788df867ed2fdd9be84ba 124 Pfam PF02082 Transcriptional regulator 6 66 1.4E-15 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type RB8152 6864876bfea788df867ed2fdd9be84ba 124 SUPERFAMILY SSF46785 6 115 6.64E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB13038 c4f2d19a8f1de7390816728917cc254f 753 Pfam PF01841 Transglutaminase-like superfamily 493 601 2.7E-18 T 11-11-2016 IPR002931 Transglutaminase-like RB13038 c4f2d19a8f1de7390816728917cc254f 753 SUPERFAMILY SSF54001 493 613 3.36E-17 T 11-11-2016 RB13038 c4f2d19a8f1de7390816728917cc254f 753 Gene3D G3DSA:3.90.260.10 517 605 2.5E-8 T 11-11-2016 IPR002931 Transglutaminase-like RB13038 c4f2d19a8f1de7390816728917cc254f 753 SMART SM00460 530 603 9.2E-6 T 11-11-2016 IPR002931 Transglutaminase-like RB6888 eb2ead461a6c556fb6f4acfd647fc71a 420 Gene3D G3DSA:2.60.40.360 59 161 1.6E-17 T 11-11-2016 IPR008962 PapD-like RB6888 eb2ead461a6c556fb6f4acfd647fc71a 420 Pfam PF07610 Protein of unknown function (DUF1573) 85 128 4.8E-11 T 11-11-2016 IPR011467 Protein of unknown function DUF1573 RB1992 8af2e55e03b17bb6957c3d73423bd41c 141 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 135 1.3E-12 T 11-11-2016 IPR028973 PhnB-like RB1992 8af2e55e03b17bb6957c3d73423bd41c 141 Gene3D G3DSA:3.10.180.10 8 137 5.9E-36 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB1992 8af2e55e03b17bb6957c3d73423bd41c 141 SUPERFAMILY SSF54593 4 135 4.88E-28 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB11421 fedb0574250d9f1baa099142d2653313 552 Pfam PF05731 TROVE domain 234 347 2.0E-7 T 11-11-2016 IPR008858 TROVE domain GO:0003723 RB11421 fedb0574250d9f1baa099142d2653313 552 SUPERFAMILY SSF53300 344 536 2.0E-28 T 11-11-2016 IPR002035 von Willebrand factor, type A RB11421 fedb0574250d9f1baa099142d2653313 552 SUPERFAMILY SSF140864 10 342 9.68E-78 T 11-11-2016 RB3005 d0a7cd1d992632815e6160e714c51a3b 198 Pfam PF13453 Transcription factor zinc-finger 152 193 5.2E-6 T 11-11-2016 IPR027392 Transcription factor zinc-finger RB3005 d0a7cd1d992632815e6160e714c51a3b 198 Pfam PF13453 Transcription factor zinc-finger 82 120 3.6E-5 T 11-11-2016 IPR027392 Transcription factor zinc-finger RB3944 4369be02d6c39c501054db5e5141335a 513 Pfam PF06439 Domain of Unknown Function (DUF1080) 106 307 3.3E-44 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB3944 4369be02d6c39c501054db5e5141335a 513 Pfam PF06439 Domain of Unknown Function (DUF1080) 326 510 2.0E-35 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB10434 e17665428c6f1294aacddda45491606a 379 Pfam PF00534 Glycosyl transferases group 1 205 354 2.4E-29 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB10434 e17665428c6f1294aacddda45491606a 379 SUPERFAMILY SSF53756 120 371 2.04E-58 T 11-11-2016 RB10434 e17665428c6f1294aacddda45491606a 379 Gene3D G3DSA:3.40.50.2000 206 353 1.7E-23 T 11-11-2016 RB2373 bdc6dccb27315be7afaabf504e4df69c 402 Pfam PF00107 Zinc-binding dehydrogenase 200 268 4.8E-10 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RB2373 bdc6dccb27315be7afaabf504e4df69c 402 Gene3D G3DSA:3.90.180.10 3 191 1.2E-43 T 11-11-2016 IPR011032 GroES-like RB2373 bdc6dccb27315be7afaabf504e4df69c 402 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 147 5.7E-23 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RB2373 bdc6dccb27315be7afaabf504e4df69c 402 SUPERFAMILY SSF50129 4 194 3.9E-57 T 11-11-2016 IPR011032 GroES-like RB2373 bdc6dccb27315be7afaabf504e4df69c 402 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 398 7.8E-243 T 11-11-2016 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 RB2373 bdc6dccb27315be7afaabf504e4df69c 402 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RB2373 bdc6dccb27315be7afaabf504e4df69c 402 Gene3D G3DSA:3.40.50.720 192 309 1.6E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2373 bdc6dccb27315be7afaabf504e4df69c 402 SUPERFAMILY SSF51735 165 358 1.28E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3272 650670231a52a7b9269d128063f5e2a5 243 PRINTS PR00418 DNA topoisomerase II family signature 199 215 1.6E-12 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3272 650670231a52a7b9269d128063f5e2a5 243 PRINTS PR00418 DNA topoisomerase II family signature 107 123 1.6E-12 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3272 650670231a52a7b9269d128063f5e2a5 243 PRINTS PR00418 DNA topoisomerase II family signature 125 142 1.6E-12 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3272 650670231a52a7b9269d128063f5e2a5 243 PRINTS PR00418 DNA topoisomerase II family signature 33 47 1.6E-12 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3272 650670231a52a7b9269d128063f5e2a5 243 Pfam PF01751 Toprim domain 32 140 1.1E-11 T 11-11-2016 IPR006171 Toprim domain RB3272 650670231a52a7b9269d128063f5e2a5 243 Gene3D G3DSA:3.40.50.670 27 241 6.2E-34 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RB3272 650670231a52a7b9269d128063f5e2a5 243 SUPERFAMILY SSF56719 16 234 3.14E-33 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RB10404 3f493bc83e4625727bbd428b72529ccd 474 Gene3D G3DSA:3.30.1950.10 112 201 9.9E-11 T 11-11-2016 RB10404 3f493bc83e4625727bbd428b72529ccd 474 Pfam PF02563 Polysaccharide biosynthesis/export protein 104 209 3.3E-12 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 RB9614 63d3a58b2a8ddb8618a84bcf38de79ac 261 SUPERFAMILY SSF53448 2 257 8.3E-47 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9614 63d3a58b2a8ddb8618a84bcf38de79ac 261 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 17 100 4.9E-21 T 11-11-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif RB11363 fa45b7524aba5e6fa8d93410d71866ca 245 Pfam PF06114 Domain of unknown function (DUF955) 99 170 5.0E-7 T 11-11-2016 IPR010359 HTH domain, IrrE-type RB9094 d5154fcb34f0e0561084d22eb12a0ec1 310 Gene3D G3DSA:3.90.550.10 41 266 1.5E-21 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9094 d5154fcb34f0e0561084d22eb12a0ec1 310 Pfam PF00483 Nucleotidyl transferase 41 241 2.6E-10 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RB9094 d5154fcb34f0e0561084d22eb12a0ec1 310 SUPERFAMILY SSF53448 41 274 9.69E-26 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB2132 9ca8107cf5fd95c4a51bf3ede4978623 1084 Pfam PF07619 Protein of unknown function (DUF1581) 385 466 3.0E-31 T 11-11-2016 IPR022660 Domain of unknown function DUF1581 RB2132 9ca8107cf5fd95c4a51bf3ede4978623 1084 Pfam PF07622 Protein of unknown function (DUF1583) 493 875 2.3E-151 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB2132 9ca8107cf5fd95c4a51bf3ede4978623 1084 Pfam PF07622 Protein of unknown function (DUF1583) 869 1082 2.2E-6 T 11-11-2016 IPR011475 Domain of unknown function DUF1583 RB6950 5397a2a3364e90f31c8fc225097c2d71 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 15 115 2.5E-28 T 11-11-2016 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RB6950 5397a2a3364e90f31c8fc225097c2d71 126 Gene3D G3DSA:1.10.3830.10 9 119 2.1E-32 T 11-11-2016 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 Pfam PF00365 Phosphofructokinase 54 411 2.0E-51 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 PIRSF PIRSF036482 49 467 3.0E-62 T 11-11-2016 IPR011403 Pyrophosphate-dependent phosphofructokinase TM0289 type GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 256 3.9E-20 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 258 275 3.9E-20 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 202 219 3.9E-20 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 220 238 3.9E-20 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 57 76 3.9E-20 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 166 182 3.9E-20 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 SUPERFAMILY SSF53784 48 464 6.8E-82 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RB7572 320bd10117ed3afeae3c33edda0e69d5 470 Gene3D G3DSA:3.40.50.450 49 277 3.0E-47 T 11-11-2016 RB3764 5c654eac43cc77ef18442cc809642a61 360 Pfam PF07632 Protein of unknown function (DUF1593) 43 314 4.2E-80 T 11-11-2016 IPR011483 Protein of unknown function DUF1593 RB1079 385c7af69a6c3e4a8f05ffaba36288eb 441 Gene3D G3DSA:3.40.50.300 87 296 5.0E-26 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1079 385c7af69a6c3e4a8f05ffaba36288eb 441 Pfam PF00406 Adenylate kinase 91 181 6.9E-8 T 11-11-2016 RB1079 385c7af69a6c3e4a8f05ffaba36288eb 441 SUPERFAMILY SSF52540 85 220 1.3E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1079 385c7af69a6c3e4a8f05ffaba36288eb 441 SUPERFAMILY SSF52540 248 297 1.3E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1079 385c7af69a6c3e4a8f05ffaba36288eb 441 PRINTS PR00094 Adenylate kinase signature 158 174 1.5E-7 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB1079 385c7af69a6c3e4a8f05ffaba36288eb 441 PRINTS PR00094 Adenylate kinase signature 88 101 1.5E-7 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RB1079 385c7af69a6c3e4a8f05ffaba36288eb 441 ProSitePatterns PS00113 Adenylate kinase signature. 158 169 - T 11-11-2016 RB6973 4038ec00807a100bf194d687af713ffc 278 Gene3D G3DSA:3.40.50.150 40 217 2.2E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6973 4038ec00807a100bf194d687af713ffc 278 Pfam PF13649 Methyltransferase domain 80 175 9.3E-16 T 11-11-2016 RB6973 4038ec00807a100bf194d687af713ffc 278 SUPERFAMILY SSF53335 237 262 9.05E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6973 4038ec00807a100bf194d687af713ffc 278 SUPERFAMILY SSF53335 42 187 9.05E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB13259 9da0942cd75f5ee27bab027c24d3a968 634 Gene3D G3DSA:3.20.20.80 226 504 7.0E-10 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RB13259 9da0942cd75f5ee27bab027c24d3a968 634 SUPERFAMILY SSF51445 525 538 3.52E-16 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB13259 9da0942cd75f5ee27bab027c24d3a968 634 SUPERFAMILY SSF51445 252 484 3.52E-16 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily RB13259 9da0942cd75f5ee27bab027c24d3a968 634 Pfam PF16586 Domain of unknown function (DUF5060) 129 195 8.9E-20 T 11-11-2016 IPR032260 Domain of unknown function DUF5060 RB13259 9da0942cd75f5ee27bab027c24d3a968 634 Pfam PF13204 Protein of unknown function (DUF4038) 226 512 1.5E-24 T 11-11-2016 IPR025277 Putative glycohydrolase domain DUF4038 RB9367 0108db9d76ced211bb1068d75796eaaf 339 SUPERFAMILY SSF51658 48 328 1.57E-56 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB9367 0108db9d76ced211bb1068d75796eaaf 339 Gene3D G3DSA:3.20.20.150 49 327 2.5E-44 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB9367 0108db9d76ced211bb1068d75796eaaf 339 Pfam PF01261 Xylose isomerase-like TIM barrel 69 276 4.7E-26 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB6184 d1dcf06402768f8d66ac4477cd245f44 91 Pfam PF02416 mttA/Hcf106 family 4 50 9.1E-11 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RB5716 d541f77aaab43a6f5eea7b5194199c2a 98 Pfam PF02656 Domain of unknown function (DUF202) 28 91 2.6E-16 T 11-11-2016 IPR003807 Domain of unknown function DUF202 RB2291 c6b125661e819c7acc9c70a464e2dfb5 248 SUPERFAMILY SSF52540 2 247 5.44E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2291 c6b125661e819c7acc9c70a464e2dfb5 248 Gene3D G3DSA:3.40.50.300 2 247 1.3E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2291 c6b125661e819c7acc9c70a464e2dfb5 248 Pfam PF13614 AAA domain 3 168 6.8E-49 T 11-11-2016 IPR025669 AAA domain RB1216 734474281aeb614fa23a8ec4eb501f03 627 Pfam PF12698 ABC-2 family transporter protein 156 305 1.3E-9 T 11-11-2016 RB7129 be47bf38eac11a7992172aa582ee10d8 76 SMART SM00899 5 73 3.7E-7 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RB7129 be47bf38eac11a7992172aa582ee10d8 76 Gene3D G3DSA:2.30.30.90 24 72 6.8E-4 T 11-11-2016 RB7129 be47bf38eac11a7992172aa582ee10d8 76 Pfam PF04023 FeoA domain 14 73 5.1E-9 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RB7129 be47bf38eac11a7992172aa582ee10d8 76 SUPERFAMILY SSF50037 13 73 6.41E-9 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal RB6795 0abccccd80453ee48d56b2e9f3222753 435 Pfam PF07394 Protein of unknown function (DUF1501) 56 434 1.1E-113 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB6795 0abccccd80453ee48d56b2e9f3222753 435 SUPERFAMILY SSF53649 226 411 9.38E-18 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6795 0abccccd80453ee48d56b2e9f3222753 435 Gene3D G3DSA:3.40.720.10 309 415 9.3E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8857 88d579681871a9c826b59e0826677db9 251 Pfam PF13649 Methyltransferase domain 60 154 2.6E-8 T 11-11-2016 RB8857 88d579681871a9c826b59e0826677db9 251 SUPERFAMILY SSF53335 35 156 4.02E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB8857 88d579681871a9c826b59e0826677db9 251 Gene3D G3DSA:3.40.50.150 25 159 9.9E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB10177 3e3749674468c51f4122f268442b6a1f 396 Gene3D G3DSA:3.30.70.1380 247 336 2.0E-27 T 11-11-2016 RB10177 3e3749674468c51f4122f268442b6a1f 396 Pfam PF01969 Protein of unknown function DUF111 5 385 5.8E-130 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 RB10177 3e3749674468c51f4122f268442b6a1f 396 Hamap MF_01074 UPF0272 protein . 2 395 37.019 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 RB10177 3e3749674468c51f4122f268442b6a1f 396 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 6 378 1.9E-88 T 11-11-2016 IPR002822 Uncharacterised protein family UPF0272 RB913 994d81defe59db69db8a7f9b3c9cb685 447 Pfam PF04230 Polysaccharide pyruvyl transferase 64 370 8.8E-20 T 11-11-2016 IPR007345 Polysaccharide pyruvyl transferase RB2032 4657c1d83b719e302f29f07500f84604 363 Pfam PF00487 Fatty acid desaturase 106 334 9.4E-15 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RB2032 4657c1d83b719e302f29f07500f84604 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 310 324 2.8E-12 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB2032 4657c1d83b719e302f29f07500f84604 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 267 288 2.8E-12 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB2032 4657c1d83b719e302f29f07500f84604 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 73 93 2.8E-12 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 RB1386 6c8f3309d561861e5aa8d297941a0d97 350 Gene3D G3DSA:3.90.245.10 26 309 5.3E-18 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB1386 6c8f3309d561861e5aa8d297941a0d97 350 SUPERFAMILY SSF53590 32 309 4.06E-32 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB1386 6c8f3309d561861e5aa8d297941a0d97 350 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 33 293 9.9E-18 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB3262 b6865c3a215580a291f405ab35170623 128 Gene3D G3DSA:3.10.180.10 15 123 5.8E-13 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB3262 b6865c3a215580a291f405ab35170623 128 SUPERFAMILY SSF54593 12 125 7.25E-16 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RB11173 0bf378881c9c55630b4f16373e8b6ae8 130 SUPERFAMILY SSF51735 3 127 1.47E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11173 0bf378881c9c55630b4f16373e8b6ae8 130 SMART SM00881 8 100 1.1E-15 T 11-11-2016 IPR003781 CoA-binding GO:0048037 RB11173 0bf378881c9c55630b4f16373e8b6ae8 130 Gene3D G3DSA:3.40.50.720 3 129 7.1E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain RB11173 0bf378881c9c55630b4f16373e8b6ae8 130 Pfam PF13380 CoA binding domain 13 126 1.1E-32 T 11-11-2016 IPR003781 CoA-binding GO:0048037 RB7052 4cf5dcc85963dd500a89b3c601f9b069 182 SUPERFAMILY SSF103473 6 159 7.98E-7 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB1526 ffe28ffdf7a626731202e26fde226fe9 328 Gene3D G3DSA:3.40.50.620 137 290 2.4E-6 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RB1526 ffe28ffdf7a626731202e26fde226fe9 328 Pfam PF02698 DUF218 domain 146 297 4.7E-21 T 11-11-2016 IPR003848 Domain of unknown function DUF218 RB10048 a8ac26f9941ef9e86cfdcc1757deb95f 542 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 136 425 6.6E-96 T 11-11-2016 IPR005181 Sialate O-acetylesterase domain RB10048 a8ac26f9941ef9e86cfdcc1757deb95f 542 SUPERFAMILY SSF52266 135 237 7.69E-78 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB10048 a8ac26f9941ef9e86cfdcc1757deb95f 542 SUPERFAMILY SSF52266 300 485 7.69E-78 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB1165 1a0c5ed23836bf7fd94b206ab1b96e94 351 Pfam PF01618 MotA/TolQ/ExbB proton channel family 204 319 3.2E-27 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RB6387 c08e767d7ba9f1c0bbd5042cba8c0389 307 Pfam PF01694 Rhomboid family 65 228 2.8E-21 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB6387 c08e767d7ba9f1c0bbd5042cba8c0389 307 Gene3D G3DSA:1.20.1540.10 29 224 3.3E-28 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB6387 c08e767d7ba9f1c0bbd5042cba8c0389 307 SUPERFAMILY SSF144091 25 232 9.94E-29 T 11-11-2016 RB3940 41c5db9ec092757196197fdc426a5b60 320 SUPERFAMILY SSF54211 2 129 2.61E-6 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RB3940 41c5db9ec092757196197fdc426a5b60 320 Pfam PF08544 GHMP kinases C terminal 219 304 1.6E-6 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain RB3940 41c5db9ec092757196197fdc426a5b60 320 Gene3D G3DSA:3.30.230.10 47 128 4.5E-4 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RB3940 41c5db9ec092757196197fdc426a5b60 320 PIRSF PIRSF004884 1 313 5.4E-42 T 11-11-2016 IPR004422 GHMP kinase group 1 MetaCyc: PWY-6148 RB6485 ccbf80a49b6d6675312fe0e808126077 466 SUPERFAMILY SSF102114 47 456 3.14E-81 T 11-11-2016 RB6485 ccbf80a49b6d6675312fe0e808126077 466 SMART SM00729 75 301 5.1E-32 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB6485 ccbf80a49b6d6675312fe0e808126077 466 Gene3D G3DSA:3.80.30.20 78 269 4.4E-30 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB6485 ccbf80a49b6d6675312fe0e808126077 466 Pfam PF04055 Radical SAM superfamily 81 252 7.1E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB11635 e7e727f4b9de20fb9d42902f065810e5 289 SUPERFAMILY SSF110849 34 131 4.45E-8 T 11-11-2016 IPR003115 ParB/Sulfiredoxin RB11635 e7e727f4b9de20fb9d42902f065810e5 289 Gene3D G3DSA:3.90.1530.10 33 132 1.6E-4 T 11-11-2016 RB5340 186b2370416ecdd3ffc1f771402df598 968 Pfam PF12705 PD-(D/E)XK nuclease superfamily 674 941 7.7E-34 T 11-11-2016 RB5340 186b2370416ecdd3ffc1f771402df598 968 SUPERFAMILY SSF52540 270 621 6.9E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5551 e38548c5a5f70432e7848c67c4543938 663 SUPERFAMILY SSF54826 237 316 8.83E-7 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RB4858 1e6ca060dd3f30043340fde56d6948fb 446 Pfam PF04773 FecR protein 133 213 5.1E-6 T 11-11-2016 IPR006860 FecR protein RB3532 38833ea9cf340f8c34269ae7c8c9f22f 328 Gene3D G3DSA:3.60.21.10 70 318 2.3E-48 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB3532 38833ea9cf340f8c34269ae7c8c9f22f 328 Pfam PF00149 Calcineurin-like phosphoesterase 74 274 1.0E-11 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB3532 38833ea9cf340f8c34269ae7c8c9f22f 328 SUPERFAMILY SSF56300 72 318 1.82E-46 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB1347 ac1fe3656ab2e0f905a5399b6024bf67 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 2.9E-27 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RB1347 ac1fe3656ab2e0f905a5399b6024bf67 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 2.9E-27 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RB1347 ac1fe3656ab2e0f905a5399b6024bf67 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 2.9E-27 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RB1347 ac1fe3656ab2e0f905a5399b6024bf67 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 2.9E-27 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RB1347 ac1fe3656ab2e0f905a5399b6024bf67 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 2.9E-27 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RB1347 ac1fe3656ab2e0f905a5399b6024bf67 360 SUPERFAMILY SSF160544 243 350 9.03E-37 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal RB1347 ac1fe3656ab2e0f905a5399b6024bf67 360 Gene3D G3DSA:3.40.1690.10 217 353 4.6E-51 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal RB1347 ac1fe3656ab2e0f905a5399b6024bf67 360 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 346 1.1E-110 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 RB3471 c86df46b5431abb983684624c74b6b41 187 Pfam PF01202 Shikimate kinase 17 176 7.7E-47 T 11-11-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RB3471 c86df46b5431abb983684624c74b6b41 187 SUPERFAMILY SSF52540 7 176 8.01E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3471 c86df46b5431abb983684624c74b6b41 187 PRINTS PR01100 Shikimate kinase family signature 35 48 2.9E-17 T 11-11-2016 RB3471 c86df46b5431abb983684624c74b6b41 187 PRINTS PR01100 Shikimate kinase family signature 11 26 2.9E-17 T 11-11-2016 RB3471 c86df46b5431abb983684624c74b6b41 187 PRINTS PR01100 Shikimate kinase family signature 81 90 2.9E-17 T 11-11-2016 RB3471 c86df46b5431abb983684624c74b6b41 187 PRINTS PR01100 Shikimate kinase family signature 63 71 2.9E-17 T 11-11-2016 RB3471 c86df46b5431abb983684624c74b6b41 187 PRINTS PR01100 Shikimate kinase family signature 102 119 2.9E-17 T 11-11-2016 RB3471 c86df46b5431abb983684624c74b6b41 187 Gene3D G3DSA:3.40.50.300 7 177 2.2E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3471 c86df46b5431abb983684624c74b6b41 187 Hamap MF_00109 Shikimate kinase [aroK]. 8 178 26.069 T 11-11-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RB3471 c86df46b5431abb983684624c74b6b41 187 ProSitePatterns PS01128 Shikimate kinase signature. 64 89 - T 11-11-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RB7225 46294f1a70b07ddfd3899c20ac98cf25 409 SUPERFAMILY SSF52266 109 307 1.1E-34 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7225 46294f1a70b07ddfd3899c20ac98cf25 409 SUPERFAMILY SSF52266 32 82 1.1E-34 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7225 46294f1a70b07ddfd3899c20ac98cf25 409 SUPERFAMILY SSF52266 374 401 1.1E-34 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB7225 46294f1a70b07ddfd3899c20ac98cf25 409 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 33 285 6.7E-10 T 11-11-2016 IPR005181 Sialate O-acetylesterase domain RB4730 5d018cdc4f6225686c15f33bb849e973 507 Pfam PF06848 Disaggregatase related repeat 52 142 6.1E-10 T 11-11-2016 IPR010671 Disaggregatase-related repeat RB9508 a11701fbdc8905830f86cbb9d502cc9f 485 Pfam PF04966 Carbohydrate-selective porin, OprB family 140 485 4.1E-55 T 11-11-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RB2530 597a257e5b522b7bde61adc968dbed83 471 SUPERFAMILY SSF109604 36 449 6.02E-62 T 11-11-2016 RB2530 597a257e5b522b7bde61adc968dbed83 471 Gene3D G3DSA:1.10.3210.10 34 287 5.4E-54 T 11-11-2016 IPR006674 HD domain RB5708 fc92517f0a60b8204986767af57a4b1e 183 Pfam PF02623 FliW protein 50 164 1.3E-27 T 11-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 RB5708 fc92517f0a60b8204986767af57a4b1e 183 Gene3D G3DSA:2.30.290.10 20 169 7.1E-42 T 11-11-2016 IPR024046 Flagellar assembly factor FliW domain RB5708 fc92517f0a60b8204986767af57a4b1e 183 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 46 167 19.767 T 11-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 RB5708 fc92517f0a60b8204986767af57a4b1e 183 SUPERFAMILY SSF141457 30 163 2.75E-35 T 11-11-2016 IPR024046 Flagellar assembly factor FliW domain RB6738 baba5171401548e32af89f7223a56b4c 120 Gene3D G3DSA:3.30.1120.10 27 57 3.7E-4 T 11-11-2016 RB3999 d83df93b5944ef0dd57fb7f1a19ce922 436 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 143 225 2.3E-18 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB3999 d83df93b5944ef0dd57fb7f1a19ce922 436 SUPERFAMILY SSF56349 151 418 2.07E-47 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB3999 d83df93b5944ef0dd57fb7f1a19ce922 436 Gene3D G3DSA:1.10.443.10 241 418 8.4E-45 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB3999 d83df93b5944ef0dd57fb7f1a19ce922 436 Pfam PF00589 Phage integrase family 241 414 2.0E-36 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB1739 5cd3f84c4dc05688520e3565969b21a3 354 Pfam PF01841 Transglutaminase-like superfamily 193 283 2.7E-19 T 11-11-2016 IPR002931 Transglutaminase-like RB1739 5cd3f84c4dc05688520e3565969b21a3 354 SUPERFAMILY SSF54001 161 276 1.02E-20 T 11-11-2016 RB1739 5cd3f84c4dc05688520e3565969b21a3 354 SMART SM00460 235 283 2.9E-5 T 11-11-2016 IPR002931 Transglutaminase-like RB8644 79eff720a38457703f7ae02d22d659f2 159 Pfam PF01878 EVE domain 2 155 3.3E-53 T 11-11-2016 IPR002740 EVE domain RB8644 79eff720a38457703f7ae02d22d659f2 159 SUPERFAMILY SSF88697 1 158 4.14E-56 T 11-11-2016 IPR015947 PUA-like domain RB8644 79eff720a38457703f7ae02d22d659f2 159 Gene3D G3DSA:3.10.590.10 1 155 3.7E-30 T 11-11-2016 IPR002740 EVE domain RB2912 62e79ed9d695ff3d03f26deadfd5fd06 313 SUPERFAMILY SSF63825 101 309 8.11E-25 T 11-11-2016 RB2912 62e79ed9d695ff3d03f26deadfd5fd06 313 Gene3D G3DSA:2.120.10.30 209 308 2.4E-11 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB2912 62e79ed9d695ff3d03f26deadfd5fd06 313 Gene3D G3DSA:2.120.10.30 51 208 4.8E-11 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB536 3477cd228abbdcea50b59eff06fd3f0e 261 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 22 252 3.3E-92 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 RB536 3477cd228abbdcea50b59eff06fd3f0e 261 Gene3D G3DSA:3.20.20.70 20 254 2.4E-95 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB536 3477cd228abbdcea50b59eff06fd3f0e 261 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 22 253 1.0E-83 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 RB536 3477cd228abbdcea50b59eff06fd3f0e 261 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 260 102.065 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 RB536 3477cd228abbdcea50b59eff06fd3f0e 261 SUPERFAMILY SSF63892 20 254 1.31E-86 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 RB1651 f6a00945ba78c2f5c9be000b95a8e744 336 Gene3D G3DSA:3.80.30.20 182 260 2.8E-6 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe RB1651 f6a00945ba78c2f5c9be000b95a8e744 336 SMART SM00729 71 293 0.0021 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RB1651 f6a00945ba78c2f5c9be000b95a8e744 336 SUPERFAMILY SSF102114 78 264 1.83E-13 T 11-11-2016 RB8210 8b53ec7fc28e6b264894a21cd2cfca4e 626 Pfam PF00005 ABC transporter 387 543 1.7E-6 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB8210 8b53ec7fc28e6b264894a21cd2cfca4e 626 SUPERFAMILY SSF52540 368 613 1.07E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8210 8b53ec7fc28e6b264894a21cd2cfca4e 626 Gene3D G3DSA:3.40.50.300 371 610 1.9E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8210 8b53ec7fc28e6b264894a21cd2cfca4e 626 SUPERFAMILY SSF90123 33 343 1.07E-8 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RB2123 15c77b214636a24fedbd50436fd6f303 71 Pfam PF07640 QPP 27 61 5.5E-20 T 11-11-2016 IPR011507 QPP RB4060 90c65558c9432f5d62af22b948ede1d7 190 Pfam PF07811 TadE-like protein 62 104 2.4E-9 T 11-11-2016 IPR012495 TadE-like RB3257 e257732d21a4611a0382929f7b7e94b8 71 SUPERFAMILY SSF143100 5 58 5.36E-13 T 11-11-2016 RB2092 ac821e6c61d5493bf1f7acfa56cdc7df 641 Pfam PF16011 Carbohydrate-binding family 9 106 278 1.3E-6 T 11-11-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 RB2092 ac821e6c61d5493bf1f7acfa56cdc7df 641 SUPERFAMILY SSF49344 72 278 6.67E-21 T 11-11-2016 RB2092 ac821e6c61d5493bf1f7acfa56cdc7df 641 Pfam PF04909 Amidohydrolase 320 631 4.3E-61 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB2092 ac821e6c61d5493bf1f7acfa56cdc7df 641 SUPERFAMILY SSF51556 317 571 2.52E-34 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB2092 ac821e6c61d5493bf1f7acfa56cdc7df 641 SUPERFAMILY SSF51556 606 631 2.52E-34 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB2092 ac821e6c61d5493bf1f7acfa56cdc7df 641 Gene3D G3DSA:3.20.20.140 498 632 1.4E-35 T 11-11-2016 RB2092 ac821e6c61d5493bf1f7acfa56cdc7df 641 Gene3D G3DSA:3.20.20.140 318 466 1.4E-35 T 11-11-2016 RB2092 ac821e6c61d5493bf1f7acfa56cdc7df 641 Gene3D G3DSA:2.60.40.1190 77 278 3.2E-22 T 11-11-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 RB1458 e1e6dda11d7221be28d107cecf332ba2 490 SUPERFAMILY SSF48208 104 334 1.93E-5 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB7238 77ce23663d29206d34c1fe4b8658bb25 591 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 499 570 1.4E-6 T 11-11-2016 RB7238 77ce23663d29206d34c1fe4b8658bb25 591 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 372 435 3.2E-12 T 11-11-2016 RB7238 77ce23663d29206d34c1fe4b8658bb25 591 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 251 325 2.5E-7 T 11-11-2016 RB7238 77ce23663d29206d34c1fe4b8658bb25 591 Gene3D G3DSA:2.130.10.130 367 574 2.1E-16 T 11-11-2016 RB7238 77ce23663d29206d34c1fe4b8658bb25 591 Gene3D G3DSA:2.130.10.130 247 331 1.0E-7 T 11-11-2016 RB7238 77ce23663d29206d34c1fe4b8658bb25 591 SUPERFAMILY SSF69318 215 575 4.32E-42 T 11-11-2016 RB3314 403b03fa1553e8ab626c17f74a54a23d 194 SUPERFAMILY SSF140990 36 186 2.35E-22 T 11-11-2016 RB3314 403b03fa1553e8ab626c17f74a54a23d 194 Pfam PF01434 Peptidase family M41 34 127 5.7E-13 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RB4805 d2de00798fac202fe8cf6150f6388902 489 Gene3D G3DSA:3.40.720.10 355 474 3.5E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB4805 d2de00798fac202fe8cf6150f6388902 489 SUPERFAMILY SSF53649 320 474 8.5E-19 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB4805 d2de00798fac202fe8cf6150f6388902 489 Pfam PF07394 Protein of unknown function (DUF1501) 75 488 4.3E-153 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB1711 6ed5adf25e0efe0a6895b36f6bbcf38d 430 SUPERFAMILY SSF52172 43 176 8.11E-27 T 11-11-2016 IPR011006 CheY-like superfamily RB1711 6ed5adf25e0efe0a6895b36f6bbcf38d 430 Gene3D G3DSA:3.40.50.2300 44 170 4.2E-29 T 11-11-2016 RB1711 6ed5adf25e0efe0a6895b36f6bbcf38d 430 Pfam PF00072 Response regulator receiver domain 45 155 2.1E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB1711 6ed5adf25e0efe0a6895b36f6bbcf38d 430 SMART SM00448 43 155 8.5E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB900 be44967622808aec9ae71a7f29599e01 823 Pfam PF07635 Planctomycete cytochrome C 55 113 2.4E-17 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB900 be44967622808aec9ae71a7f29599e01 823 Pfam PF07583 Protein of unknown function (DUF1549) 178 390 1.1E-82 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB900 be44967622808aec9ae71a7f29599e01 823 Pfam PF07587 Protein of unknown function (DUF1553) 534 783 7.6E-83 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB5288 ba9557782ae6402003f49061c4111f67 363 Pfam PF06439 Domain of Unknown Function (DUF1080) 164 355 1.1E-32 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB11624 23895255006a76172a378c80330cf942 348 Pfam PF14082 Domain of unknown function (DUF4263) 191 334 8.3E-14 T 11-11-2016 IPR025359 Protein of unknown function DUF4263 RB13117 297b0782eae150cfcbb1206110a7eed5 156 Pfam PF00072 Response regulator receiver domain 16 119 1.2E-5 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB13117 297b0782eae150cfcbb1206110a7eed5 156 SUPERFAMILY SSF52172 6 147 3.22E-20 T 11-11-2016 IPR011006 CheY-like superfamily RB13117 297b0782eae150cfcbb1206110a7eed5 156 Gene3D G3DSA:3.40.50.2300 4 125 1.1E-10 T 11-11-2016 RB850 5357c2d90be6d7bff6d8f5e097024e5f 600 Pfam PF07639 YTV 184 222 2.5E-8 T 11-11-2016 IPR011521 YTV RB850 5357c2d90be6d7bff6d8f5e097024e5f 600 Pfam PF07639 YTV 226 264 9.7E-10 T 11-11-2016 IPR011521 YTV RB850 5357c2d90be6d7bff6d8f5e097024e5f 600 Pfam PF07639 YTV 254 294 1.1E-4 T 11-11-2016 IPR011521 YTV RB850 5357c2d90be6d7bff6d8f5e097024e5f 600 Pfam PF07639 YTV 156 193 2.7E-5 T 11-11-2016 IPR011521 YTV RB2878 aa1e7d31fc6cceac76586442e2565479 219 PIRSF PIRSF010260 28 214 1.2E-28 T 11-11-2016 IPR014457 Uncharacterised conserved protein UCP010260 RB2878 aa1e7d31fc6cceac76586442e2565479 219 Pfam PF09348 Domain of unknown function (DUF1990) 49 207 1.6E-46 T 11-11-2016 IPR018960 Domain of unknown function DUF1990 RB11891 34183df2189ef19c2795d0df0de96033 552 SUPERFAMILY SSF56672 1 237 1.11E-14 T 11-11-2016 RB1936 6a7713cb1185edc766ed64cb17337e83 1019 Gene3D G3DSA:3.40.30.10 878 995 6.7E-13 T 11-11-2016 IPR012336 Thioredoxin-like fold RB1936 6a7713cb1185edc766ed64cb17337e83 1019 Pfam PF13620 Carboxypeptidase regulatory-like domain 357 440 3.4E-8 T 11-11-2016 RB1936 6a7713cb1185edc766ed64cb17337e83 1019 Gene3D G3DSA:2.60.40.1120 68 120 7.4E-4 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB1936 6a7713cb1185edc766ed64cb17337e83 1019 Gene3D G3DSA:2.60.40.1120 357 440 2.6E-6 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB1936 6a7713cb1185edc766ed64cb17337e83 1019 Gene3D G3DSA:2.60.40.1120 446 519 1.1E-4 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain RB1936 6a7713cb1185edc766ed64cb17337e83 1019 Pfam PF00085 Thioredoxin 892 935 5.7E-5 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 RB1936 6a7713cb1185edc766ed64cb17337e83 1019 SUPERFAMILY SSF52833 877 969 1.54E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold RB1936 6a7713cb1185edc766ed64cb17337e83 1019 SUPERFAMILY SSF49464 357 426 1.29E-6 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain RB10730 5a1f7627ba99688651bf680f3ebe4bb1 45 Pfam PF07623 Protein of unknown function (DUF1584) 2 28 1.2E-17 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB12875 237f0774fc270a3d2ed3ed9ecdebc1ac 371 Pfam PF07596 Protein of unknown function (DUF1559) 14 351 8.5E-67 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB2725 64a1e843b75cb7d529053ab5943c949e 427 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 13 398 5.7E-57 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 RB2725 64a1e843b75cb7d529053ab5943c949e 427 Pfam PF02684 Lipid-A-disaccharide synthetase 15 394 1.5E-63 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 RB2725 64a1e843b75cb7d529053ab5943c949e 427 SUPERFAMILY SSF53756 15 402 2.98E-16 T 11-11-2016 RB10347 ca2924d0e05af85763c4da2243ae013f 184 SUPERFAMILY SSF109854 21 179 1.74E-23 T 11-11-2016 RB10347 ca2924d0e05af85763c4da2243ae013f 184 Gene3D G3DSA:1.20.120.450 2 181 3.7E-28 T 11-11-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RB10347 ca2924d0e05af85763c4da2243ae013f 184 Pfam PF12867 DinB superfamily 28 171 7.9E-18 T 11-11-2016 IPR024775 DinB-like domain RB9684 2762e60e0647863c17ddd88eb50f8c9d 215 Pfam PF09850 Type VI secretion system protein DotU 12 208 1.5E-25 T 11-11-2016 IPR017732 Type IV / VI secretion system, DotU RB1591 952afeccfade326beab5152b82ff4adc 464 SUPERFAMILY SSF51905 421 459 1.88E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1591 952afeccfade326beab5152b82ff4adc 464 SUPERFAMILY SSF51905 1 304 1.88E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1591 952afeccfade326beab5152b82ff4adc 464 Gene3D G3DSA:3.50.50.60 196 286 7.6E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1591 952afeccfade326beab5152b82ff4adc 464 Gene3D G3DSA:3.50.50.60 411 458 7.6E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1591 952afeccfade326beab5152b82ff4adc 464 Gene3D G3DSA:3.50.50.60 146 147 7.6E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1591 952afeccfade326beab5152b82ff4adc 464 Gene3D G3DSA:3.50.50.60 1 78 7.6E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB1591 952afeccfade326beab5152b82ff4adc 464 Pfam PF01593 Flavin containing amine oxidoreductase 11 459 2.7E-11 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB11942 8cb769b12aa3e3ef41d2da8a92fe36b9 283 SUPERFAMILY SSF69593 68 227 5.89E-7 T 11-11-2016 RB11942 8cb769b12aa3e3ef41d2da8a92fe36b9 283 Pfam PF01553 Acyltransferase 66 185 1.3E-8 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RB6139 78abc879bfdcb7d955dcec9a665fa28b 187 SUPERFAMILY SSF81301 24 183 1.21E-35 T 11-11-2016 RB6139 78abc879bfdcb7d955dcec9a665fa28b 187 Pfam PF04229 GrpB protein 21 181 4.5E-35 T 11-11-2016 IPR007344 GrpB/Dephospho-CoA kinase RB6139 78abc879bfdcb7d955dcec9a665fa28b 187 Gene3D G3DSA:3.30.460.10 21 184 5.3E-38 T 11-11-2016 RB2928 f7d6d8652173b00154f07668c6ba2d01 163 SUPERFAMILY SSF55729 1 162 1.56E-28 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB2928 f7d6d8652173b00154f07668c6ba2d01 163 Pfam PF00583 Acetyltransferase (GNAT) family 59 135 4.7E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB2928 f7d6d8652173b00154f07668c6ba2d01 163 Gene3D G3DSA:3.40.630.30 3 162 3.6E-29 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB13304 daf173c2de38c29af5e94818cd7f94b9 454 SUPERFAMILY SSF55031 253 370 5.76E-23 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB13304 daf173c2de38c29af5e94818cd7f94b9 454 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 48 448 5.7E-111 T 11-11-2016 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 RB13304 daf173c2de38c29af5e94818cd7f94b9 454 Gene3D G3DSA:3.30.70.360 267 370 8.9E-31 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB13304 daf173c2de38c29af5e94818cd7f94b9 454 Gene3D G3DSA:3.40.630.10 43 266 5.1E-100 T 11-11-2016 RB13304 daf173c2de38c29af5e94818cd7f94b9 454 Gene3D G3DSA:3.40.630.10 392 449 5.1E-100 T 11-11-2016 RB13304 daf173c2de38c29af5e94818cd7f94b9 454 SUPERFAMILY SSF53187 42 263 1.04E-79 T 11-11-2016 RB13304 daf173c2de38c29af5e94818cd7f94b9 454 SUPERFAMILY SSF53187 377 449 1.04E-79 T 11-11-2016 RB13304 daf173c2de38c29af5e94818cd7f94b9 454 PIRSF PIRSF001235 42 454 1.3E-155 T 11-11-2016 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 RB13304 daf173c2de38c29af5e94818cd7f94b9 454 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 117 126 - T 11-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RB13304 daf173c2de38c29af5e94818cd7f94b9 454 Pfam PF07687 Peptidase dimerisation domain 253 354 1.1E-5 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain RB13304 daf173c2de38c29af5e94818cd7f94b9 454 Pfam PF01546 Peptidase family M20/M25/M40 118 446 1.5E-33 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RB3312 61d091e5e6f667b060aabe99fa6a8e25 320 SUPERFAMILY SSF51735 10 162 3.13E-10 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3312 61d091e5e6f667b060aabe99fa6a8e25 320 Pfam PF02558 Ketopantoate reductase PanE/ApbA 11 157 7.4E-39 T 11-11-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 RB3312 61d091e5e6f667b060aabe99fa6a8e25 320 SUPERFAMILY SSF48179 189 311 1.67E-22 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RB3312 61d091e5e6f667b060aabe99fa6a8e25 320 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 9 313 1.2E-70 T 11-11-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 RB3312 61d091e5e6f667b060aabe99fa6a8e25 320 Gene3D G3DSA:3.40.50.720 6 188 2.8E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain RB3312 61d091e5e6f667b060aabe99fa6a8e25 320 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 189 310 4.9E-25 T 11-11-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 RB3312 61d091e5e6f667b060aabe99fa6a8e25 320 Gene3D G3DSA:1.10.1040.10 190 311 1.4E-24 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RB940 b97bff2f32d38b3c5385227a9a6cec30 569 SUPERFAMILY SSF50939 446 556 9.81E-11 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB940 b97bff2f32d38b3c5385227a9a6cec30 569 SUPERFAMILY SSF50939 284 380 9.81E-11 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB940 b97bff2f32d38b3c5385227a9a6cec30 569 SUPERFAMILY SSF50939 212 236 9.81E-11 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB940 b97bff2f32d38b3c5385227a9a6cec30 569 Gene3D G3DSA:2.120.10.10 207 246 5.1E-10 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB940 b97bff2f32d38b3c5385227a9a6cec30 569 Gene3D G3DSA:2.120.10.10 452 555 5.1E-10 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB940 b97bff2f32d38b3c5385227a9a6cec30 569 Gene3D G3DSA:2.120.10.10 295 378 5.1E-10 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RB940 b97bff2f32d38b3c5385227a9a6cec30 569 Pfam PF15892 BNR repeat-containing family member 207 446 1.2E-19 T 11-11-2016 RB9159 3cc41a3291d74b7e093e33b720655f8b 325 SUPERFAMILY SSF54523 99 168 6.75E-14 T 11-11-2016 RB9159 3cc41a3291d74b7e093e33b720655f8b 325 SUPERFAMILY SSF54523 15 72 6.75E-14 T 11-11-2016 RB9159 3cc41a3291d74b7e093e33b720655f8b 325 Pfam PF07596 Protein of unknown function (DUF1559) 41 306 9.8E-51 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB3959 dfcba73050915e3e0d9d7afbf482cc21 136 Pfam PF03061 Thioesterase superfamily 47 124 3.2E-14 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 RB3959 dfcba73050915e3e0d9d7afbf482cc21 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 29 131 1.2E-21 T 11-11-2016 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 RB3959 dfcba73050915e3e0d9d7afbf482cc21 136 Gene3D G3DSA:3.10.129.10 3 133 2.1E-39 T 11-11-2016 IPR029069 HotDog domain RB3959 dfcba73050915e3e0d9d7afbf482cc21 136 SUPERFAMILY SSF54637 4 133 7.0E-28 T 11-11-2016 IPR029069 HotDog domain RB136 4dee5d15ea77f98b33d59db763cb40c8 342 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 79 9.4E-5 T 11-11-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RB136 4dee5d15ea77f98b33d59db763cb40c8 342 SUPERFAMILY SSF103025 4 244 1.88E-36 T 11-11-2016 RB136 4dee5d15ea77f98b33d59db763cb40c8 342 Gene3D G3DSA:3.30.70.1400 15 75 1.2E-7 T 11-11-2016 RB136 4dee5d15ea77f98b33d59db763cb40c8 342 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 191 255 1.2E-19 T 11-11-2016 IPR017703 YgfZ/GcvT conserved site RB136 4dee5d15ea77f98b33d59db763cb40c8 342 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 229 330 1.1E-7 T 11-11-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RB13222 b9cc961b551337f9d3ed77eac4199091 208 SUPERFAMILY SSF55136 24 207 2.62E-42 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain RB13222 b9cc961b551337f9d3ed77eac4199091 208 Pfam PF04832 SOUL heme-binding protein 32 205 6.1E-42 T 11-11-2016 IPR006917 SOUL haem-binding protein RB5515 d16a6a963b120c3a8a4528bfb8585b3f 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 41 3.9E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5515 d16a6a963b120c3a8a4528bfb8585b3f 172 Pfam PF13633 Prokaryotic N-terminal methylation site 20 43 1.7E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB1081 54af9419e80ca4e8c4cf8a8c8931eb57 232 Pfam PF01048 Phosphorylase superfamily 38 227 1.1E-12 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB1081 54af9419e80ca4e8c4cf8a8c8931eb57 232 Gene3D G3DSA:3.40.50.1580 29 223 5.9E-29 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB1081 54af9419e80ca4e8c4cf8a8c8931eb57 232 TIGRFAM TIGR03664 fut_nucase: futalosine hydrolase 7 231 2.3E-62 T 11-11-2016 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374 RB1081 54af9419e80ca4e8c4cf8a8c8931eb57 232 SUPERFAMILY SSF53167 8 216 2.09E-27 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RB2470 319a6bf192bbf15a3ba3f16a437ef07a 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 156 0.0023 T 11-11-2016 IPR001451 Hexapeptide repeat RB2470 319a6bf192bbf15a3ba3f16a437ef07a 176 SUPERFAMILY SSF51161 20 173 6.38E-36 T 11-11-2016 IPR011004 Trimeric LpxA-like RB2470 319a6bf192bbf15a3ba3f16a437ef07a 176 Gene3D G3DSA:2.160.10.10 33 171 2.4E-37 T 11-11-2016 RB10968 55a786afb64e6475331a7c552c8d0583 457 SUPERFAMILY SSF53720 3 454 1.57E-144 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB10968 55a786afb64e6475331a7c552c8d0583 457 Gene3D G3DSA:3.40.605.10 3 241 5.5E-75 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB10968 55a786afb64e6475331a7c552c8d0583 457 Pfam PF00171 Aldehyde dehydrogenase family 3 449 1.7E-140 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB10968 55a786afb64e6475331a7c552c8d0583 457 Gene3D G3DSA:3.40.309.10 242 426 4.2E-64 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB10968 55a786afb64e6475331a7c552c8d0583 457 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 227 234 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RB8202 fe36d565b14fafce2452a6b22df0a6ea 228 Gene3D G3DSA:3.90.79.10 118 224 8.1E-7 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB8202 fe36d565b14fafce2452a6b22df0a6ea 228 SUPERFAMILY SSF55811 117 216 9.94E-6 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB2558 1afd993a113529aa130d69c8d3796ab2 348 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 55 137 1.6E-18 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB2558 1afd993a113529aa130d69c8d3796ab2 348 Pfam PF00589 Phage integrase family 153 326 1.2E-36 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB2558 1afd993a113529aa130d69c8d3796ab2 348 Gene3D G3DSA:1.10.443.10 153 330 4.9E-45 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB2558 1afd993a113529aa130d69c8d3796ab2 348 SUPERFAMILY SSF56349 63 330 1.29E-47 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB3524 ba8a4146c93380deb6df2afbf2c24d51 616 Pfam PF08479 POTRA domain, ShlB-type 137 192 2.9E-7 T 11-11-2016 IPR013686 Polypeptide-transport-associated, ShlB-type RB3524 ba8a4146c93380deb6df2afbf2c24d51 616 Gene3D G3DSA:2.40.160.50 229 610 4.9E-40 T 11-11-2016 RB3524 ba8a4146c93380deb6df2afbf2c24d51 616 Gene3D G3DSA:3.10.20.310 136 192 6.6E-4 T 11-11-2016 RB7562 8ff8d914234b8e8c8cc1026e0d856b39 300 Pfam PF07859 alpha/beta hydrolase fold 67 277 1.8E-18 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RB7562 8ff8d914234b8e8c8cc1026e0d856b39 300 Gene3D G3DSA:3.40.50.1820 45 295 1.9E-59 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7562 8ff8d914234b8e8c8cc1026e0d856b39 300 SUPERFAMILY SSF53474 44 282 8.22E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 SMART SM00564 348 379 140.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 SMART SM00564 199 235 450.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 SMART SM00564 249 279 1.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 SMART SM00564 152 183 160.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 SMART SM00564 96 133 22.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 Pfam PF13360 PQQ-like domain 335 416 5.9E-7 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 Pfam PF13360 PQQ-like domain 220 304 2.3E-9 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 Pfam PF13360 PQQ-like domain 82 186 3.6E-8 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 SUPERFAMILY SSF50998 50 417 2.88E-45 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB1451 2772f92ce804d65d8418b7b717fbb2d9 464 Gene3D G3DSA:2.140.10.10 36 460 5.7E-45 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB13021 00f5cd17429faf30ea3a4463c3d94131 257 SUPERFAMILY SSF52047 118 238 2.16E-18 T 11-11-2016 RB13021 00f5cd17429faf30ea3a4463c3d94131 257 Pfam PF13516 Leucine Rich repeat 175 193 0.11 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 RB13021 00f5cd17429faf30ea3a4463c3d94131 257 Gene3D G3DSA:3.80.10.10 120 234 4.6E-19 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB7102 1fadf605162da6dd035a60954fcad38a 313 SUPERFAMILY SSF117892 93 218 4.05E-17 T 11-11-2016 IPR001107 Band 7 domain RB7102 1fadf605162da6dd035a60954fcad38a 313 Pfam PF01145 SPFH domain / Band 7 family 63 211 3.0E-9 T 11-11-2016 IPR001107 Band 7 domain RB12334 4392cbf911ee1f557a30d9945a3c5e58 266 Pfam PF02163 Peptidase family M50 170 213 8.8E-7 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 RB4982 ccd4604cd9bdc26bed853459e86562a2 282 Pfam PF13460 NAD(P)H-binding 9 186 1.2E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4982 ccd4604cd9bdc26bed853459e86562a2 282 SUPERFAMILY SSF51735 3 247 1.98E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain RB4982 ccd4604cd9bdc26bed853459e86562a2 282 Gene3D G3DSA:3.40.50.720 1 218 2.9E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain RB7580 aa2b780cde26dea1c35219d0fd8b3437 275 Pfam PF08543 Phosphomethylpyrimidine kinase 28 268 8.5E-88 T 11-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 RB7580 aa2b780cde26dea1c35219d0fd8b3437 275 SUPERFAMILY SSF53613 19 268 6.24E-75 T 11-11-2016 IPR029056 Ribokinase-like RB7580 aa2b780cde26dea1c35219d0fd8b3437 275 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 21 268 1.4E-87 T 11-11-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RB7580 aa2b780cde26dea1c35219d0fd8b3437 275 Gene3D G3DSA:3.40.1190.20 19 268 1.2E-95 T 11-11-2016 IPR029056 Ribokinase-like RB6753 78411a0eb131e8e74016a3583abc9c3b 517 Pfam PF00425 chorismate binding enzyme 251 504 4.7E-91 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RB6753 78411a0eb131e8e74016a3583abc9c3b 517 Gene3D G3DSA:3.60.120.10 45 515 1.6E-136 T 11-11-2016 IPR005801 ADC synthase GO:0009058 RB6753 78411a0eb131e8e74016a3583abc9c3b 517 SUPERFAMILY SSF56322 59 512 1.7E-126 T 11-11-2016 IPR005801 ADC synthase GO:0009058 RB6753 78411a0eb131e8e74016a3583abc9c3b 517 PRINTS PR00095 Anthranilate synthase component I signature 446 460 4.5E-14 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB6753 78411a0eb131e8e74016a3583abc9c3b 517 PRINTS PR00095 Anthranilate synthase component I signature 461 475 4.5E-14 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB6753 78411a0eb131e8e74016a3583abc9c3b 517 PRINTS PR00095 Anthranilate synthase component I signature 352 365 4.5E-14 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB6753 78411a0eb131e8e74016a3583abc9c3b 517 PRINTS PR00095 Anthranilate synthase component I signature 366 379 4.5E-14 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB6753 78411a0eb131e8e74016a3583abc9c3b 517 Pfam PF04715 Anthranilate synthase component I, N terminal region 63 188 1.8E-12 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RB4958 8ffe9b9c43cc6139e47f4bc27d0e8821 250 SUPERFAMILY SSF49879 84 211 2.3E-23 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 RB4958 8ffe9b9c43cc6139e47f4bc27d0e8821 250 Gene3D G3DSA:2.60.200.20 119 202 8.8E-21 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB4958 8ffe9b9c43cc6139e47f4bc27d0e8821 250 SMART SM00240 130 180 2.5E-11 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB4958 8ffe9b9c43cc6139e47f4bc27d0e8821 250 Pfam PF00498 FHA domain 132 182 2.6E-14 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RB12175 ea80ea9030af0e534d2326d9eb50eb2a 301 PRINTS PR01008 Flagellar L-ring protein signature 137 149 6.7E-5 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RB12175 ea80ea9030af0e534d2326d9eb50eb2a 301 PRINTS PR01008 Flagellar L-ring protein signature 215 230 6.7E-5 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RB12175 ea80ea9030af0e534d2326d9eb50eb2a 301 PRINTS PR01008 Flagellar L-ring protein signature 241 257 6.7E-5 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RB12175 ea80ea9030af0e534d2326d9eb50eb2a 301 PRINTS PR01008 Flagellar L-ring protein signature 278 292 6.7E-5 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RB12175 ea80ea9030af0e534d2326d9eb50eb2a 301 Pfam PF02107 Flagellar L-ring protein 134 300 2.7E-30 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 RB10164 4ec62182fbd79cfac8ecd6a646dd49dd 192 Pfam PF07638 ECF sigma factor 9 191 1.1E-71 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB10164 4ec62182fbd79cfac8ecd6a646dd49dd 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 185 2.6E-12 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RB10164 4ec62182fbd79cfac8ecd6a646dd49dd 192 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 10 190 1.9E-67 T 11-11-2016 IPR011517 RNA polymerase sigma-70 ECF-like RB10164 4ec62182fbd79cfac8ecd6a646dd49dd 192 Gene3D G3DSA:1.10.1740.10 11 107 7.6E-5 T 11-11-2016 RB2261 a518a011406a3fce5e4004227bbac2c0 542 Gene3D G3DSA:3.40.50.1820 84 521 2.6E-52 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2261 a518a011406a3fce5e4004227bbac2c0 542 Pfam PF00450 Serine carboxypeptidase 107 271 4.6E-14 T 11-11-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 RB2261 a518a011406a3fce5e4004227bbac2c0 542 SUPERFAMILY SSF53474 76 521 8.71E-71 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11559 e5621edb5eb6fd16eac35ce32f854620 462 SUPERFAMILY SSF48239 436 455 3.77E-37 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11559 e5621edb5eb6fd16eac35ce32f854620 462 SUPERFAMILY SSF48239 133 384 3.77E-37 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11559 e5621edb5eb6fd16eac35ce32f854620 462 Gene3D G3DSA:1.50.10.20 413 453 9.9E-26 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB11559 e5621edb5eb6fd16eac35ce32f854620 462 Gene3D G3DSA:1.50.10.20 135 366 9.9E-26 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB7093 a4f348d1a084c1264600df8ed7ba4a19 218 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 62 127 1.7E-14 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RB7093 a4f348d1a084c1264600df8ed7ba4a19 218 Pfam PF03840 Preprotein translocase SecG subunit 63 127 8.5E-13 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RB6266 0afb51774d3e16cace6688e1c1fe3bd2 731 Gene3D G3DSA:3.40.50.300 73 125 1.0E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6266 0afb51774d3e16cace6688e1c1fe3bd2 731 Gene3D G3DSA:3.40.50.300 184 259 1.0E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB6266 0afb51774d3e16cace6688e1c1fe3bd2 731 SUPERFAMILY SSF52540 69 259 7.41E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8738 3dd15d7965df553d0dbdb10a8f12c784 183 Pfam PF14478 Domain of unknown function (DUF4430) 104 173 3.1E-16 T 11-11-2016 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 RB6211 07f5517934d2b7fbd0c99a05ffd6d98b 732 SMART SM00028 655 688 0.0022 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RB6211 07f5517934d2b7fbd0c99a05ffd6d98b 732 SUPERFAMILY SSF48452 618 706 2.98E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6211 07f5517934d2b7fbd0c99a05ffd6d98b 732 Gene3D G3DSA:1.25.40.10 607 702 6.3E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6211 07f5517934d2b7fbd0c99a05ffd6d98b 732 Gene3D G3DSA:1.10.710.10 388 459 3.9E-25 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6211 07f5517934d2b7fbd0c99a05ffd6d98b 732 Gene3D G3DSA:1.10.710.10 121 166 3.9E-25 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6211 07f5517934d2b7fbd0c99a05ffd6d98b 732 Gene3D G3DSA:1.10.710.10 247 344 3.9E-25 T 11-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RB6211 07f5517934d2b7fbd0c99a05ffd6d98b 732 SUPERFAMILY SSF48695 123 144 3.91E-31 T 11-11-2016 IPR011031 Multihaem cytochrome RB6211 07f5517934d2b7fbd0c99a05ffd6d98b 732 SUPERFAMILY SSF48695 209 478 3.91E-31 T 11-11-2016 IPR011031 Multihaem cytochrome RB7195 896bcf24180a8726a44ae263905dd1a5 90 Pfam PF07621 Protein of unknown function (DUF1582) 16 44 1.9E-16 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB1566 2a37b2bc31e68fe0584d48f0d3e35f6a 1161 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 1091 1124 - T 11-11-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RB1566 2a37b2bc31e68fe0584d48f0d3e35f6a 1161 Pfam PF00263 Bacterial type II and III secretion system protein 1059 1145 4.8E-19 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 RB1566 2a37b2bc31e68fe0584d48f0d3e35f6a 1161 Pfam PF00263 Bacterial type II and III secretion system protein 941 1049 2.2E-5 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 RB4595 d0bd5e91e957e006be1bfea0a032250a 183 Pfam PF04390 Lipopolysaccharide-assembly 22 179 8.5E-13 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RB11419 cb6b108efb6ceac5c2b1533d0dd579af 174 Pfam PF04493 Endonuclease V 2 135 1.4E-12 T 11-11-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 RB8596 073f0c25f4cdd49fc8615e6b5951059a 524 Gene3D G3DSA:3.30.1120.10 416 487 1.8E-13 T 11-11-2016 RB8596 073f0c25f4cdd49fc8615e6b5951059a 524 Pfam PF16347 Domain of unknown function (DUF4976) 388 486 3.2E-13 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB8596 073f0c25f4cdd49fc8615e6b5951059a 524 Gene3D G3DSA:3.40.720.10 41 400 7.9E-105 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8596 073f0c25f4cdd49fc8615e6b5951059a 524 Pfam PF00884 Sulfatase 43 384 1.0E-65 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB8596 073f0c25f4cdd49fc8615e6b5951059a 524 SUPERFAMILY SSF53649 42 486 1.78E-122 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB8596 073f0c25f4cdd49fc8615e6b5951059a 524 ProSitePatterns PS00523 Sulfatases signature 1. 89 101 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB8596 073f0c25f4cdd49fc8615e6b5951059a 524 ProSitePatterns PS00149 Sulfatases signature 2. 131 141 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB9849 14b6b2711ca69d260e1e1a32fac23f9e 281 Pfam PF06439 Domain of Unknown Function (DUF1080) 79 278 1.9E-38 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB5211 ce43a02c9a4aa88ac5d9ad9b40e2e836 159 SUPERFAMILY SSF159888 15 142 6.67E-8 T 11-11-2016 RB5211 ce43a02c9a4aa88ac5d9ad9b40e2e836 159 Pfam PF08818 Domain of unknown function (DU1801) 29 141 2.2E-13 T 11-11-2016 IPR014922 Domain of unknown function DUF1801 RB10463 676fc777d45e7aadf1bb91855d18c820 324 SUPERFAMILY SSF63380 17 101 1.04E-8 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RB10463 676fc777d45e7aadf1bb91855d18c820 324 SUPERFAMILY SSF52343 162 310 1.31E-24 T 11-11-2016 RB10463 676fc777d45e7aadf1bb91855d18c820 324 Gene3D G3DSA:3.40.50.80 155 324 1.3E-28 T 11-11-2016 RB10463 676fc777d45e7aadf1bb91855d18c820 324 Gene3D G3DSA:2.40.30.10 14 154 3.4E-12 T 11-11-2016 RB10463 676fc777d45e7aadf1bb91855d18c820 324 Pfam PF00175 Oxidoreductase NAD-binding domain 169 285 1.9E-11 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RB8913 72184714f0f09679f943ce4ec85cc40e 245 SUPERFAMILY SSF51366 23 238 3.14E-46 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RB8913 72184714f0f09679f943ce4ec85cc40e 245 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 22 241 31.522 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 RB8913 72184714f0f09679f943ce4ec85cc40e 245 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 24 236 6.2E-42 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 RB8913 72184714f0f09679f943ce4ec85cc40e 245 Gene3D G3DSA:3.20.20.70 23 239 3.0E-53 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB5627 aba84e9d17bb8d337763ed0097c04517 878 SUPERFAMILY SSF55486 374 598 3.28E-43 T 11-11-2016 RB5627 aba84e9d17bb8d337763ed0097c04517 878 Gene3D G3DSA:1.10.390.10 468 601 1.7E-14 T 11-11-2016 RB12685 bb1d33594163ad290e801768df82acb1 431 SUPERFAMILY SSF81452 30 157 1.83E-24 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12685 bb1d33594163ad290e801768df82acb1 431 SUPERFAMILY SSF81452 360 430 1.03E-20 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12685 bb1d33594163ad290e801768df82acb1 431 Gene3D G3DSA:1.20.120.80 362 430 4.4E-58 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12685 bb1d33594163ad290e801768df82acb1 431 Gene3D G3DSA:1.20.120.80 39 151 4.4E-58 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12685 bb1d33594163ad290e801768df82acb1 431 Pfam PF00510 Cytochrome c oxidase subunit III 44 157 3.3E-8 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB12685 bb1d33594163ad290e801768df82acb1 431 Pfam PF00510 Cytochrome c oxidase subunit III 362 428 4.3E-9 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RB9698 c0b050bfc4490a84caf8803903814a51 349 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 23 333 1.1E-97 T 11-11-2016 IPR010732 Type VI secretion, TssG-like RB9698 c0b050bfc4490a84caf8803903814a51 349 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 23 333 2.9E-84 T 11-11-2016 IPR010732 Type VI secretion, TssG-like RB8833 9213ea1c832fcf3f8fa79c9318edc8ce 317 Pfam PF02535 ZIP Zinc transporter 11 287 9.3E-32 T 11-11-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RB5098 e5f644d5c958c4c18d1d1d94d9c2e8e9 324 Gene3D G3DSA:1.10.3130.10 35 178 6.2E-38 T 11-11-2016 RB5098 e5f644d5c958c4c18d1d1d94d9c2e8e9 324 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 198 234 1.4E-4 T 11-11-2016 IPR001451 Hexapeptide repeat RB5098 e5f644d5c958c4c18d1d1d94d9c2e8e9 324 Gene3D G3DSA:2.160.10.10 179 316 5.8E-28 T 11-11-2016 RB5098 e5f644d5c958c4c18d1d1d94d9c2e8e9 324 SUPERFAMILY SSF51161 128 298 4.71E-44 T 11-11-2016 IPR011004 Trimeric LpxA-like RB2473 500c86901634886f4d0e7f6e606543ac 376 Pfam PF00534 Glycosyl transferases group 1 189 334 9.4E-27 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB2473 500c86901634886f4d0e7f6e606543ac 376 SUPERFAMILY SSF53756 66 347 4.17E-39 T 11-11-2016 RB2473 500c86901634886f4d0e7f6e606543ac 376 Gene3D G3DSA:3.40.50.2000 184 335 3.9E-21 T 11-11-2016 RB11147 072ae22b2da0f783d221e7a4eebc59f8 216 SUPERFAMILY SSF52788 57 212 4.19E-20 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RB11147 072ae22b2da0f783d221e7a4eebc59f8 216 Gene3D G3DSA:3.40.50.270 55 210 5.8E-23 T 11-11-2016 RB8574 68c28524a313d83553e35c0dbaa6fdb3 367 Gene3D G3DSA:3.75.10.10 17 355 2.9E-108 T 11-11-2016 RB8574 68c28524a313d83553e35c0dbaa6fdb3 367 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 19 354 8.6E-100 T 11-11-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 RB8574 68c28524a313d83553e35c0dbaa6fdb3 367 SUPERFAMILY SSF55909 15 355 1.48E-101 T 11-11-2016 RB5924 91f4bd4feef8c80e2bb23fdbc8c2bf1e 847 SUPERFAMILY SSF81296 62 139 3.08E-10 T 11-11-2016 IPR014756 Immunoglobulin E-set RB5924 91f4bd4feef8c80e2bb23fdbc8c2bf1e 847 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 377 447 3.2E-6 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB5924 91f4bd4feef8c80e2bb23fdbc8c2bf1e 847 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 181 258 1.8E-8 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial RB5924 91f4bd4feef8c80e2bb23fdbc8c2bf1e 847 Gene3D G3DSA:2.60.120.380 152 261 1.6E-9 T 11-11-2016 RB5924 91f4bd4feef8c80e2bb23fdbc8c2bf1e 847 Gene3D G3DSA:2.60.120.380 344 463 5.4E-7 T 11-11-2016 RB2203 0e1a2912c759b92b6905b14d768adb82 57 Pfam PF07623 Protein of unknown function (DUF1584) 22 48 1.5E-11 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB7038 daadafff6e44da9466a038ef9a416b08 217 Pfam PF07639 YTV 172 213 1.8E-10 T 11-11-2016 IPR011521 YTV RB7038 daadafff6e44da9466a038ef9a416b08 217 Pfam PF07639 YTV 117 159 7.7E-14 T 11-11-2016 IPR011521 YTV RB4308 3bc9ee5e6dc61df1284f8488fb0a66b2 79 Pfam PF07625 Protein of unknown function (DUF1586) 36 57 7.2E-16 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB974 62e3fb60ba254eda83999e1517baa4f6 157 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 148 29.469 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 RB974 62e3fb60ba254eda83999e1517baa4f6 157 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 146 7.2E-41 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 RB9798 a732abad7ba5e16f9acfdfe265233831 380 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 24 61 4.0E-5 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RB8905 f8309c3d9069aff97e22ee96937bcac8 273 Gene3D G3DSA:3.90.550.10 27 222 4.7E-21 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB8905 f8309c3d9069aff97e22ee96937bcac8 273 SUPERFAMILY SSF53448 19 262 8.84E-38 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB8905 f8309c3d9069aff97e22ee96937bcac8 273 Pfam PF00535 Glycosyl transferase family 2 31 194 5.5E-18 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB8306 83ea1e5dad4863de0bb11bdfca46ac83 265 Pfam PF02674 Colicin V production protein 5 139 4.1E-30 T 11-11-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RB6867 2ed999f503c18c88f695c42bae42467c 509 Pfam PF07607 Protein of unknown function (DUF1570) 339 463 5.4E-47 T 11-11-2016 IPR011464 Domain of unknown function DUF1570 RB9875 983ccb6b21ec5de782fcec6c00eca381 280 SUPERFAMILY SSF56281 31 263 3.79E-30 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB9875 983ccb6b21ec5de782fcec6c00eca381 280 Gene3D G3DSA:3.60.15.10 17 266 1.8E-32 T 11-11-2016 IPR001279 Metallo-beta-lactamase RB8176 b425636d9bd666c0f6c158e2eb8a5acf 704 Pfam PF07584 Aerotolerance regulator N-terminal 1 76 7.2E-16 T 11-11-2016 IPR024163 Aerotolerance regulator, N-terminal RB8176 b425636d9bd666c0f6c158e2eb8a5acf 704 Pfam PF13519 von Willebrand factor type A domain 94 186 4.2E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8176 b425636d9bd666c0f6c158e2eb8a5acf 704 Gene3D G3DSA:3.40.50.410 93 191 4.3E-4 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8176 b425636d9bd666c0f6c158e2eb8a5acf 704 SUPERFAMILY SSF53300 91 188 4.85E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB8176 b425636d9bd666c0f6c158e2eb8a5acf 704 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 81 3.1E-26 T 11-11-2016 IPR011933 Double transmembrane domain RB5869 9189735656fe11ed58555cf23187bf1e 257 SUPERFAMILY SSF52833 102 237 8.36E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5869 9189735656fe11ed58555cf23187bf1e 257 Gene3D G3DSA:3.40.30.10 100 248 2.5E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold RB5869 9189735656fe11ed58555cf23187bf1e 257 Pfam PF08534 Redoxin 104 252 2.1E-27 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RB11279 8c8ed803a13bbaf8bc94e1103375aec2 502 Pfam PF07394 Protein of unknown function (DUF1501) 80 501 2.6E-149 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB11279 8c8ed803a13bbaf8bc94e1103375aec2 502 SUPERFAMILY SSF53649 324 477 3.49E-19 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB11279 8c8ed803a13bbaf8bc94e1103375aec2 502 Gene3D G3DSA:3.40.720.10 352 477 2.1E-6 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB9592 382fa8ef5ce70cab031c4877c34bfdff 269 Pfam PF10127 Predicted nucleotidyltransferase 10 249 6.1E-59 T 11-11-2016 IPR018775 Nucleotidyltransferase, predicted RB756 23bd6376e244f40768c47e9e2116ffdc 720 Gene3D G3DSA:1.20.1600.10 376 713 1.7E-9 T 11-11-2016 RB756 23bd6376e244f40768c47e9e2116ffdc 720 Pfam PF05569 BlaR1 peptidase M56 87 279 3.5E-35 T 11-11-2016 IPR008756 Peptidase M56 RB756 23bd6376e244f40768c47e9e2116ffdc 720 SUPERFAMILY SSF56954 358 713 4.32E-16 T 11-11-2016 RB756 23bd6376e244f40768c47e9e2116ffdc 720 Gene3D G3DSA:3.30.2010.10 130 205 3.2E-6 T 11-11-2016 RB6978 7944d33c8a83728277658133a7501f60 731 Pfam PF13437 HlyD family secretion protein 419 509 2.6E-7 T 11-11-2016 RB12631 d9b1b28c99fa85072c9b498894f1b20c 527 SUPERFAMILY SSF51556 229 510 3.85E-52 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB12631 d9b1b28c99fa85072c9b498894f1b20c 527 SUPERFAMILY SSF51556 189 197 3.85E-52 T 11-11-2016 IPR032466 Metal-dependent hydrolase RB12631 d9b1b28c99fa85072c9b498894f1b20c 527 Gene3D G3DSA:3.20.20.140 187 511 1.6E-33 T 11-11-2016 RB12631 d9b1b28c99fa85072c9b498894f1b20c 527 Pfam PF04909 Amidohydrolase 191 510 1.7E-58 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 RB11027 1def3cc3aea90fb96b0b502e656625bb 935 Pfam PF12704 MacB-like periplasmic core domain 18 251 5.6E-7 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB11027 1def3cc3aea90fb96b0b502e656625bb 935 Pfam PF02687 FtsX-like permease family 297 407 1.2E-13 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB11027 1def3cc3aea90fb96b0b502e656625bb 935 Pfam PF02687 FtsX-like permease family 803 922 2.5E-18 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB3820 8e21d6713ec835051c91a670764d095e 329 Pfam PF01066 CDP-alcohol phosphatidyltransferase 66 139 1.8E-13 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RB3820 8e21d6713ec835051c91a670764d095e 329 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 117 139 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RB3820 8e21d6713ec835051c91a670764d095e 329 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 72 262 8.5E-34 T 11-11-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 RB384 625011f83f14fc6a31fc2168fbf567e8 98 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 24 89 9.8E-14 T 11-11-2016 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 RB384 625011f83f14fc6a31fc2168fbf567e8 98 SUPERFAMILY SSF56399 27 97 1.06E-14 T 11-11-2016 RB11155 80338350697bd5f93f5ab53d56f03f1e 494 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 66 468 2.2E-68 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RB11155 80338350697bd5f93f5ab53d56f03f1e 494 Gene3D G3DSA:1.20.1600.10 69 472 1.9E-83 T 11-11-2016 RB11155 80338350697bd5f93f5ab53d56f03f1e 494 SUPERFAMILY SSF56954 17 471 3.14E-87 T 11-11-2016 RB11155 80338350697bd5f93f5ab53d56f03f1e 494 Pfam PF02321 Outer membrane efflux protein 288 466 8.2E-20 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB11155 80338350697bd5f93f5ab53d56f03f1e 494 Pfam PF02321 Outer membrane efflux protein 84 261 1.4E-19 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB9637 2446583ce15e76b536dc0c261dabf511 516 Gene3D G3DSA:3.90.550.10 60 267 4.2E-60 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9637 2446583ce15e76b536dc0c261dabf511 516 Pfam PF00535 Glycosyl transferase family 2 63 186 3.4E-30 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB9637 2446583ce15e76b536dc0c261dabf511 516 SUPERFAMILY SSF53448 60 283 3.87E-60 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB538 ba3a84dcee1f46bfbb807b5b1c58944f 470 Gene3D G3DSA:3.20.20.150 217 313 2.7E-8 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB538 ba3a84dcee1f46bfbb807b5b1c58944f 470 SUPERFAMILY SSF51658 115 343 1.05E-24 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB538 ba3a84dcee1f46bfbb807b5b1c58944f 470 Pfam PF01261 Xylose isomerase-like TIM barrel 130 310 6.6E-7 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB8406 a6000a831cc22f67ebecf27d58d28b3b 357 SMART SM00871 205 357 2.1E-13 T 11-11-2016 IPR010499 Bacterial transcription activator, effector binding RB8406 a6000a831cc22f67ebecf27d58d28b3b 357 SUPERFAMILY SSF55136 210 357 1.73E-15 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain RB8406 a6000a831cc22f67ebecf27d58d28b3b 357 Gene3D G3DSA:3.30.530.20 39 197 6.0E-5 T 11-11-2016 IPR023393 START-like domain RB8406 a6000a831cc22f67ebecf27d58d28b3b 357 Pfam PF06445 GyrI-like small molecule binding domain 212 357 1.2E-9 T 11-11-2016 IPR029442 GyrI-like small molecule binding domain RB8406 a6000a831cc22f67ebecf27d58d28b3b 357 SUPERFAMILY SSF55961 40 198 1.53E-15 T 11-11-2016 RB8406 a6000a831cc22f67ebecf27d58d28b3b 357 Gene3D G3DSA:3.20.80.10 227 357 1.9E-11 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain RB8406 a6000a831cc22f67ebecf27d58d28b3b 357 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 42 194 5.0E-14 T 11-11-2016 IPR019587 Polyketide cyclase/dehydrase RB10814 8577868ea7c25915fa7a8329e2e10fb2 542 Pfam PF07643 Protein of unknown function (DUF1598) 249 330 2.2E-27 T 11-11-2016 IPR011487 Protein of unknown function DUF1598 RB12781 3ea4017e9d95e07df9d93228e9dc997e 479 PRINTS PR00812 Bacterial general secretion pathway protein F signature 71 83 1.0E-8 T 11-11-2016 IPR003004 GspF/PilC family RB12781 3ea4017e9d95e07df9d93228e9dc997e 479 PRINTS PR00812 Bacterial general secretion pathway protein F signature 170 198 1.0E-8 T 11-11-2016 IPR003004 GspF/PilC family RB12781 3ea4017e9d95e07df9d93228e9dc997e 479 Pfam PF00482 Type II secretion system (T2SS), protein F 75 198 2.6E-32 T 11-11-2016 IPR018076 Type II secretion system F domain RB12781 3ea4017e9d95e07df9d93228e9dc997e 479 Pfam PF00482 Type II secretion system (T2SS), protein F 279 343 2.9E-6 T 11-11-2016 IPR018076 Type II secretion system F domain RB12781 3ea4017e9d95e07df9d93228e9dc997e 479 Pfam PF00482 Type II secretion system (T2SS), protein F 370 470 1.9E-14 T 11-11-2016 IPR018076 Type II secretion system F domain RB3521 b9d3d2565a9ef7e3bbe6b4e18a7d7a10 108 Gene3D G3DSA:1.10.10.10 9 107 6.9E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3521 b9d3d2565a9ef7e3bbe6b4e18a7d7a10 108 SMART SM00418 28 106 5.1E-16 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB3521 b9d3d2565a9ef7e3bbe6b4e18a7d7a10 108 SUPERFAMILY SSF46785 15 107 7.45E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB3521 b9d3d2565a9ef7e3bbe6b4e18a7d7a10 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 1.3E-7 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB3521 b9d3d2565a9ef7e3bbe6b4e18a7d7a10 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 78 93 1.3E-7 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB3521 b9d3d2565a9ef7e3bbe6b4e18a7d7a10 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 1.3E-7 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB3521 b9d3d2565a9ef7e3bbe6b4e18a7d7a10 108 Pfam PF01022 Bacterial regulatory protein, arsR family 35 80 1.2E-13 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RB11943 b3941fad832f8742f512836a4cb7cbcd 534 Gene3D G3DSA:3.50.50.60 23 117 1.5E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11943 b3941fad832f8742f512836a4cb7cbcd 534 Gene3D G3DSA:3.50.50.60 248 392 1.5E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11943 b3941fad832f8742f512836a4cb7cbcd 534 Pfam PF01593 Flavin containing amine oxidoreductase 31 313 2.4E-20 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB11943 b3941fad832f8742f512836a4cb7cbcd 534 SUPERFAMILY SSF51905 20 354 1.3E-61 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11943 b3941fad832f8742f512836a4cb7cbcd 534 SUPERFAMILY SSF51905 487 527 1.3E-61 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB11943 b3941fad832f8742f512836a4cb7cbcd 534 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 24 530 7.2E-122 T 11-11-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 RB9955 adef450a23cb173679b23ef0b6da0ef0 452 Pfam PF07586 Protein of unknown function (DUF1552) 51 354 8.1E-81 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB9769 b0af28cd23573094083ae6c801662047 121 SMART SM00226 4 114 0.0032 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RB9769 b0af28cd23573094083ae6c801662047 121 Gene3D G3DSA:3.40.50.270 43 98 2.7E-4 T 11-11-2016 RB9769 b0af28cd23573094083ae6c801662047 121 Gene3D G3DSA:3.40.50.270 3 40 8.3E-8 T 11-11-2016 RB9769 b0af28cd23573094083ae6c801662047 121 PIRSF PIRSF029416 3 111 6.3E-51 T 11-11-2016 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 RB9769 b0af28cd23573094083ae6c801662047 121 SUPERFAMILY SSF52788 3 111 4.97E-20 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RB5691 b8b411877bedb69e18aaef2f11cbfe38 408 Gene3D G3DSA:3.80.10.10 212 400 1.1E-23 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB5691 b8b411877bedb69e18aaef2f11cbfe38 408 SUPERFAMILY SSF52047 241 395 5.89E-20 T 11-11-2016 RB5691 b8b411877bedb69e18aaef2f11cbfe38 408 Pfam PF13516 Leucine Rich repeat 268 286 0.2 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 RB4799 fe4ca2824b4a99da5c79c746a637b244 570 PIRSF PIRSF007542 1 562 5.9E-264 T 11-11-2016 IPR012037 Alpha/beta-hydrolase family RB4799 fe4ca2824b4a99da5c79c746a637b244 570 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 36 243 1.7E-62 T 11-11-2016 IPR027788 Alpha/beta-hydrolase, N-terminal domain RB4799 fe4ca2824b4a99da5c79c746a637b244 570 SUPERFAMILY SSF53474 302 475 2.61E-5 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4799 fe4ca2824b4a99da5c79c746a637b244 570 Pfam PF10081 Alpha/beta-hydrolase family 260 547 2.8E-120 T 11-11-2016 IPR027787 Alpha/beta-hydrolase, catalytic domain RB4775 77caaf6cfb7f772d71a1c634b42c117c 433 Pfam PF00872 Transposase, Mutator family 32 406 1.5E-35 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RB1456 da04662207cb622045260a000e3edfc1 495 SUPERFAMILY SSF53649 55 479 8.72E-115 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB1456 da04662207cb622045260a000e3edfc1 495 Gene3D G3DSA:3.30.1120.10 402 482 3.4E-14 T 11-11-2016 RB1456 da04662207cb622045260a000e3edfc1 495 ProSitePatterns PS00523 Sulfatases signature 1. 103 115 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB1456 da04662207cb622045260a000e3edfc1 495 Gene3D G3DSA:3.40.720.10 55 396 7.8E-96 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB1456 da04662207cb622045260a000e3edfc1 495 Pfam PF00884 Sulfatase 57 375 2.2E-60 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB11597 c922eeca270942e18f81a06ba313397d 387 Pfam PF00482 Type II secretion system (T2SS), protein F 255 378 1.1E-22 T 11-11-2016 IPR018076 Type II secretion system F domain RB11597 c922eeca270942e18f81a06ba313397d 387 Pfam PF00482 Type II secretion system (T2SS), protein F 53 175 2.0E-23 T 11-11-2016 IPR018076 Type II secretion system F domain RB11597 c922eeca270942e18f81a06ba313397d 387 PRINTS PR00812 Bacterial general secretion pathway protein F signature 48 60 1.1E-11 T 11-11-2016 IPR003004 GspF/PilC family RB11597 c922eeca270942e18f81a06ba313397d 387 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 386 1.1E-11 T 11-11-2016 IPR003004 GspF/PilC family RB11597 c922eeca270942e18f81a06ba313397d 387 PRINTS PR00812 Bacterial general secretion pathway protein F signature 351 365 1.1E-11 T 11-11-2016 IPR003004 GspF/PilC family RB11597 c922eeca270942e18f81a06ba313397d 387 PRINTS PR00812 Bacterial general secretion pathway protein F signature 147 175 1.1E-11 T 11-11-2016 IPR003004 GspF/PilC family RB9438 bd3946fe0ad644ae3648b995f1e6fea7 492 SUPERFAMILY SSF50952 34 237 3.4E-9 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RB9438 bd3946fe0ad644ae3648b995f1e6fea7 492 Gene3D G3DSA:2.120.10.30 33 361 5.5E-21 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like RB8246 c0aa1c9883b37ee968c3f188a9281607 266 SUPERFAMILY SSF55797 57 190 1.2E-20 T 11-11-2016 IPR014044 CAP domain RB8246 c0aa1c9883b37ee968c3f188a9281607 266 Gene3D G3DSA:3.40.33.10 58 189 5.7E-13 T 11-11-2016 IPR014044 CAP domain RB8246 c0aa1c9883b37ee968c3f188a9281607 266 Pfam PF00188 Cysteine-rich secretory protein family 67 185 2.7E-13 T 11-11-2016 IPR014044 CAP domain RB9384 a0a895ddbcf2b81e32993041fdd60677 436 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 414 1.0E-45 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RB12949 f3e0d3c01d1b3d74d6702fd321ae0276 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 468 5.2E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12949 f3e0d3c01d1b3d74d6702fd321ae0276 470 SUPERFAMILY SSF55874 355 467 4.45E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12949 f3e0d3c01d1b3d74d6702fd321ae0276 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 3.9E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12949 f3e0d3c01d1b3d74d6702fd321ae0276 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 3.9E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12949 f3e0d3c01d1b3d74d6702fd321ae0276 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 426 3.9E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12949 f3e0d3c01d1b3d74d6702fd321ae0276 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 3.9E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RB12949 f3e0d3c01d1b3d74d6702fd321ae0276 470 Gene3D G3DSA:3.30.565.10 327 469 1.8E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB12949 f3e0d3c01d1b3d74d6702fd321ae0276 470 SMART SM00387 361 469 1.5E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB5246 7136f49963a9e2cf0a5119ad363b3122 333 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 282 304 1.0E-5 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB5246 7136f49963a9e2cf0a5119ad363b3122 333 SUPERFAMILY SSF50494 70 267 1.3E-7 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB7578 76b730c87ebccae1cdf232ac5291a183 189 Pfam PF02599 Global regulator protein family 1 48 1.0E-22 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB7578 76b730c87ebccae1cdf232ac5291a183 189 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 46 1.0E-18 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB7578 76b730c87ebccae1cdf232ac5291a183 189 SUPERFAMILY SSF117130 1 48 3.53E-17 T 11-11-2016 RB12145 ae4364504ef5ce2f0e42a07b05a172b4 369 Pfam PF00899 ThiF family 35 270 1.9E-61 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RB12145 ae4364504ef5ce2f0e42a07b05a172b4 369 Gene3D G3DSA:3.40.50.720 29 273 2.8E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12145 ae4364504ef5ce2f0e42a07b05a172b4 369 SUPERFAMILY SSF69572 28 354 1.44E-74 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RB6090 d2d615c58fa3d87ed77bed504889fbc3 156 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 131 55.609 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RB6090 d2d615c58fa3d87ed77bed504889fbc3 156 SUPERFAMILY SSF50692 6 122 6.83E-42 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain RB6090 d2d615c58fa3d87ed77bed504889fbc3 156 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 9 99 3.0E-47 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RB6090 d2d615c58fa3d87ed77bed504889fbc3 156 Gene3D G3DSA:2.40.40.20 7 121 1.0E-45 T 11-11-2016 RB6090 d2d615c58fa3d87ed77bed504889fbc3 156 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 6 122 4.5E-37 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RB6090 d2d615c58fa3d87ed77bed504889fbc3 156 Pfam PF02261 Aspartate decarboxylase 7 118 4.7E-43 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RB5913 b6d2f67f4b6f69b41dd376092c400dbe 162 Pfam PF12019 Type II transport protein GspH 40 153 5.2E-9 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RB1559 61d27d82c8561e87438c20bbf67141e2 193 SUPERFAMILY SSF53254 11 189 1.03E-32 T 11-11-2016 IPR029033 Histidine phosphatase superfamily RB1559 61d27d82c8561e87438c20bbf67141e2 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 12 191 6.6E-33 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RB1559 61d27d82c8561e87438c20bbf67141e2 193 Gene3D G3DSA:3.40.50.1240 9 191 3.3E-34 T 11-11-2016 IPR029033 Histidine phosphatase superfamily RB6629 e4be463df3738ff6402647ae145a59c2 708 SUPERFAMILY SSF53474 243 387 7.96E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6629 e4be463df3738ff6402647ae145a59c2 708 Pfam PF00326 Prolyl oligopeptidase family 246 386 3.3E-6 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RB6629 e4be463df3738ff6402647ae145a59c2 708 Gene3D G3DSA:3.40.50.1820 155 386 1.6E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB11095 88ac92a3409c4c4b4803cf05569aecc7 327 SUPERFAMILY SSF52833 190 326 8.25E-11 T 11-11-2016 IPR012336 Thioredoxin-like fold RB6520 ba2ef6de2d8061a5987d4f2cbf6747b2 374 Gene3D G3DSA:3.40.50.2000 152 343 2.3E-28 T 11-11-2016 RB6520 ba2ef6de2d8061a5987d4f2cbf6747b2 374 Pfam PF13439 Glycosyltransferase Family 4 13 165 1.2E-22 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RB6520 ba2ef6de2d8061a5987d4f2cbf6747b2 374 SUPERFAMILY SSF53756 2 365 2.66E-76 T 11-11-2016 RB6520 ba2ef6de2d8061a5987d4f2cbf6747b2 374 Pfam PF00534 Glycosyl transferases group 1 176 343 3.2E-30 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB12700 4074430e2e833970344a8766e27a4fc0 463 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 373 419 1.2E-9 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB5762 e191994774d601cf2640aded2f72dad9 137 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 44 120 1.2E-15 T 11-11-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RB5762 e191994774d601cf2640aded2f72dad9 137 Gene3D G3DSA:1.10.287.1080 11 112 2.2E-24 T 11-11-2016 RB5762 e191994774d601cf2640aded2f72dad9 137 SUPERFAMILY SSF101386 17 118 3.36E-24 T 11-11-2016 RB9128 b16610d2d0450a316b591458b095e94d 201 Pfam PF10755 Protein of unknown function (DUF2585) 39 201 2.8E-72 T 11-11-2016 IPR019691 Protein of unknown function DUF2585 GO:0005886 RB9128 b16610d2d0450a316b591458b095e94d 201 Hamap MF_01514 UPF0314 protein . 3 201 35.42 T 11-11-2016 IPR019691 Protein of unknown function DUF2585 GO:0005886 RB11323 b5e0249dccb41421bd7404af00e2cf91 143 SUPERFAMILY SSF55811 8 67 1.1E-5 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB11323 b5e0249dccb41421bd7404af00e2cf91 143 Gene3D G3DSA:3.90.79.10 11 101 2.0E-5 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB5161 596a93ba90596012de1091b1ac6f5163 432 SUPERFAMILY SSF56954 153 418 7.72E-7 T 11-11-2016 RB3213 92e5e4e8d0756bc666349ca09f48df85 527 Pfam PF13785 Domain of unknown function (DUF4178) 58 203 2.6E-19 T 11-11-2016 IPR025235 Domain of unknown function DUF4178 RB3213 92e5e4e8d0756bc666349ca09f48df85 527 Pfam PF13785 Domain of unknown function (DUF4178) 284 423 3.1E-26 T 11-11-2016 IPR025235 Domain of unknown function DUF4178 RB8515 bdb4ce1b9dc590e2561199411439c795 533 Pfam PF14229 Domain of unknown function (DUF4332) 366 487 1.0E-12 T 11-11-2016 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 RB8515 bdb4ce1b9dc590e2561199411439c795 533 Gene3D G3DSA:1.10.575.10 18 234 1.1E-10 T 11-11-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 RB8515 bdb4ce1b9dc590e2561199411439c795 533 SUPERFAMILY SSF48537 17 188 2.62E-10 T 11-11-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 RB8515 bdb4ce1b9dc590e2561199411439c795 533 Gene3D G3DSA:1.10.150.20 361 399 3.9E-6 T 11-11-2016 RB10960 d482bcbe7518a21b3ded1593ed4125ec 139 Pfam PF07681 DoxX 22 90 1.5E-5 T 11-11-2016 IPR032808 DoxX family RB5871 9c286b403912245952aaf513d3358015 485 Gene3D G3DSA:1.10.8.60 402 465 3.9E-4 T 11-11-2016 RB5871 9c286b403912245952aaf513d3358015 485 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 271 394 6.1E-20 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RB5871 9c286b403912245952aaf513d3358015 485 SMART SM00382 267 396 1.9E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain RB5871 9c286b403912245952aaf513d3358015 485 SUPERFAMILY SSF52540 217 450 6.17E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB5871 9c286b403912245952aaf513d3358015 485 Gene3D G3DSA:3.40.50.300 225 401 2.0E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB12687 901deac18dc0f7dae4ae2334123897cf 130 TIGRFAM TIGR02229 caa3_sub_IV: caa(3)-type oxidase, subunit IV 24 107 3.4E-16 T 11-11-2016 IPR011743 Caa(3)-type oxidase, subunit IV RB12687 901deac18dc0f7dae4ae2334123897cf 130 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 33 101 1.4E-11 T 11-11-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 RB5472 bea7ec7509fe6e7a7c9eb5655341c451 137 Pfam PF00072 Response regulator receiver domain 10 119 2.7E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5472 bea7ec7509fe6e7a7c9eb5655341c451 137 SMART SM00448 8 119 8.2E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RB5472 bea7ec7509fe6e7a7c9eb5655341c451 137 Gene3D G3DSA:3.40.50.2300 6 126 2.0E-30 T 11-11-2016 RB5472 bea7ec7509fe6e7a7c9eb5655341c451 137 SUPERFAMILY SSF52172 5 129 7.26E-31 T 11-11-2016 IPR011006 CheY-like superfamily RB10109 705b878d426a9f28732301ed2c0dcc4d 131 Pfam PF05258 Protein of unknown function (DUF721) 39 126 1.9E-16 T 11-11-2016 IPR007922 Protein of unknown function DUF721/UPF0232 RB1371 8cc28c4dea54008a79b9e91a534f118c 468 Pfam PF01343 Peptidase family S49 221 325 9.2E-23 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RB1371 8cc28c4dea54008a79b9e91a534f118c 468 Gene3D G3DSA:3.90.226.10 146 249 7.2E-31 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB1371 8cc28c4dea54008a79b9e91a534f118c 468 Gene3D G3DSA:3.90.226.10 366 408 7.2E-31 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB1371 8cc28c4dea54008a79b9e91a534f118c 468 SUPERFAMILY SSF52096 371 392 1.32E-26 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB1371 8cc28c4dea54008a79b9e91a534f118c 468 SUPERFAMILY SSF52096 296 340 1.32E-26 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB1371 8cc28c4dea54008a79b9e91a534f118c 468 SUPERFAMILY SSF52096 146 267 1.32E-26 T 11-11-2016 IPR029045 ClpP/crotonase-like domain RB1371 8cc28c4dea54008a79b9e91a534f118c 468 Gene3D G3DSA:3.40.1750.10 250 325 3.1E-15 T 11-11-2016 RB207 d31edd669af953bea32e9f73448c2ab8 583 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 1 534 2.1E-173 T 11-11-2016 IPR019934 Conserved hypothetical protein CHP03545 RB9463 7216d2ae1e8e082b1672c14dc89fca82 628 SUPERFAMILY SSF52540 428 609 1.02E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9463 7216d2ae1e8e082b1672c14dc89fca82 628 SUPERFAMILY SSF52540 321 385 1.02E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9463 7216d2ae1e8e082b1672c14dc89fca82 628 Gene3D G3DSA:3.40.50.300 429 567 1.3E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB9463 7216d2ae1e8e082b1672c14dc89fca82 628 Gene3D G3DSA:3.40.50.300 314 386 1.3E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1210 f2c4e23b2a349cdd669019b0e6deb1d6 281 SUPERFAMILY SSF51658 22 262 4.98E-42 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB1210 f2c4e23b2a349cdd669019b0e6deb1d6 281 Gene3D G3DSA:3.20.20.150 22 271 6.3E-46 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB1210 f2c4e23b2a349cdd669019b0e6deb1d6 281 Pfam PF01261 Xylose isomerase-like TIM barrel 23 230 1.6E-31 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB7777 a67ed5a380f2dcf15d470cae3bb85efe 599 Pfam PF12801 4Fe-4S binding domain 534 569 0.066 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB7777 a67ed5a380f2dcf15d470cae3bb85efe 599 Pfam PF12801 4Fe-4S binding domain 440 488 2.3E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RB7777 a67ed5a380f2dcf15d470cae3bb85efe 599 SMART SM00900 256 343 0.055 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RB7777 a67ed5a380f2dcf15d470cae3bb85efe 599 SMART SM00900 114 200 8.0E-7 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RB7777 a67ed5a380f2dcf15d470cae3bb85efe 599 Pfam PF04205 FMN-binding domain 114 193 1.3E-4 T 11-11-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RB7621 09409693944d51fccfa9755b02a90a73 334 SUPERFAMILY SSF54862 181 245 1.38E-13 T 11-11-2016 RB7621 09409693944d51fccfa9755b02a90a73 334 Gene3D G3DSA:3.30.70.20 185 249 5.1E-11 T 11-11-2016 RB12178 5a1a538ac6b9842f7de96a7c23e69795 477 SMART SM00858 334 396 1.6E-8 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 RB12178 5a1a538ac6b9842f7de96a7c23e69795 477 Pfam PF13144 Chaperone for flagella basal body P-ring formation 319 457 2.3E-28 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RB12178 5a1a538ac6b9842f7de96a7c23e69795 477 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 325 457 2.0E-34 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal RB3159 073cead37761e0e55c70d0bffa3fb1f2 73 Pfam PF07629 Protein of unknown function (DUF1590) 38 69 3.9E-23 T 11-11-2016 IPR011481 Protein of unknown function DUF1590 RB5722 3cfb7e12c11acf4f9b2b6917e695961d 303 Gene3D G3DSA:3.90.70.10 174 301 3.2E-5 T 11-11-2016 RB291 dd56ea613ba9e00cfe1abb3590eb6fdf 471 SUPERFAMILY SSF51905 426 435 1.52E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB291 dd56ea613ba9e00cfe1abb3590eb6fdf 471 SUPERFAMILY SSF51905 33 322 1.52E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB291 dd56ea613ba9e00cfe1abb3590eb6fdf 471 Gene3D G3DSA:3.50.50.60 30 129 4.1E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB291 dd56ea613ba9e00cfe1abb3590eb6fdf 471 Gene3D G3DSA:3.50.50.60 218 323 4.1E-24 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB291 dd56ea613ba9e00cfe1abb3590eb6fdf 471 Pfam PF01593 Flavin containing amine oxidoreductase 41 396 6.4E-26 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RB10704 0129783653bbcd52c04181ea321540cf 259 Pfam PF02472 Biopolymer transport protein ExbD/TolR 118 252 2.1E-22 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RB9386 b3d91d28dbf2d4c9332d1cdb7891bc64 402 Gene3D G3DSA:1.25.40.10 204 365 0.001 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9386 b3d91d28dbf2d4c9332d1cdb7891bc64 402 Pfam PF00578 AhpC/TSA family 41 176 9.9E-14 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB9386 b3d91d28dbf2d4c9332d1cdb7891bc64 402 SUPERFAMILY SSF52833 13 177 1.72E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold RB9386 b3d91d28dbf2d4c9332d1cdb7891bc64 402 Gene3D G3DSA:3.40.30.10 16 203 2.4E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12718 f5aec539c8cf1073e3c70c077ebd88d7 381 SUPERFAMILY SSF109604 241 331 4.89E-10 T 11-11-2016 RB12718 f5aec539c8cf1073e3c70c077ebd88d7 381 Pfam PF01966 HD domain 258 326 8.0E-5 T 11-11-2016 IPR006674 HD domain RB12718 f5aec539c8cf1073e3c70c077ebd88d7 381 Gene3D G3DSA:1.10.3210.10 241 325 3.1E-7 T 11-11-2016 IPR006674 HD domain RB7597 1d1b6b42a6bc447a62d81b947b13d506 150 SUPERFAMILY SSF46785 6 146 1.54E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7597 1d1b6b42a6bc447a62d81b947b13d506 150 Pfam PF01047 MarR family 36 94 3.9E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB7597 1d1b6b42a6bc447a62d81b947b13d506 150 SMART SM00347 28 129 3.3E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB7597 1d1b6b42a6bc447a62d81b947b13d506 150 Gene3D G3DSA:1.10.10.10 3 144 5.8E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB7597 1d1b6b42a6bc447a62d81b947b13d506 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.9E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB7597 1d1b6b42a6bc447a62d81b947b13d506 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.9E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB7597 1d1b6b42a6bc447a62d81b947b13d506 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.9E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB7597 1d1b6b42a6bc447a62d81b947b13d506 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 1.9E-5 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RB12844 9dbc4346e93458943491373c322599a8 342 Pfam PF01261 Xylose isomerase-like TIM barrel 101 279 1.2E-17 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12844 9dbc4346e93458943491373c322599a8 342 Gene3D G3DSA:3.20.20.150 69 332 1.1E-38 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12844 9dbc4346e93458943491373c322599a8 342 SUPERFAMILY SSF51658 66 342 1.7E-47 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB11922 42759eded30498982023df47483ce623 150 Pfam PF04238 Protein of unknown function (DUF420) 9 145 2.5E-40 T 11-11-2016 IPR007352 Protein of unknown function DUF420 RB7297 1d902fa1e2b4e9332d63356db9df91e0 202 SUPERFAMILY SSF50630 52 186 2.14E-37 T 11-11-2016 IPR021109 Aspartic peptidase domain RB7297 1d902fa1e2b4e9332d63356db9df91e0 202 Gene3D G3DSA:2.40.70.10 51 179 5.2E-37 T 11-11-2016 IPR021109 Aspartic peptidase domain RB7297 1d902fa1e2b4e9332d63356db9df91e0 202 Pfam PF05618 Putative ATP-dependant zinc protease 52 188 2.3E-28 T 11-11-2016 RB9693 6eb5ca397c2755f6792f1135755d4f40 184 SUPERFAMILY SSF160719 87 160 4.84E-8 T 11-11-2016 RB9693 6eb5ca397c2755f6792f1135755d4f40 184 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 150 3.9E-15 T 11-11-2016 IPR017737 Type VI secretion system, lysozyme-related protein RB9693 6eb5ca397c2755f6792f1135755d4f40 184 Pfam PF04965 Gene 25-like lysozyme 54 147 1.1E-16 T 11-11-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RB4714 c270ea8fab2d65a2e698dd08085b5be0 432 Pfam PF07728 AAA domain (dynein-related subfamily) 139 284 5.5E-37 T 11-11-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RB4714 c270ea8fab2d65a2e698dd08085b5be0 432 SMART SM00382 135 294 0.0079 T 11-11-2016 IPR003593 AAA+ ATPase domain RB4714 c270ea8fab2d65a2e698dd08085b5be0 432 SUPERFAMILY SSF52540 115 359 1.44E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4714 c270ea8fab2d65a2e698dd08085b5be0 432 Gene3D G3DSA:3.40.50.300 120 291 6.6E-18 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10398 b665722226041f42f91bc5549e60bd6e 483 Gene3D G3DSA:3.40.50.980 169 296 1.4E-7 T 11-11-2016 RB10398 b665722226041f42f91bc5549e60bd6e 483 Gene3D G3DSA:3.30.300.30 380 483 6.7E-25 T 11-11-2016 RB10398 b665722226041f42f91bc5549e60bd6e 483 SUPERFAMILY SSF56801 97 423 4.06E-33 T 11-11-2016 RB10398 b665722226041f42f91bc5549e60bd6e 483 Pfam PF14535 AMP-binding enzyme C-terminal domain 390 483 2.0E-18 T 11-11-2016 IPR028154 AMP-dependent ligase, C-terminal RB12137 c5b5f478aadb1f35fb51e35da9dce862 116 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 26 97 6.4E-17 T 11-11-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 RB12137 c5b5f478aadb1f35fb51e35da9dce862 116 SUPERFAMILY SSF54736 24 104 6.8E-23 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RB12137 c5b5f478aadb1f35fb51e35da9dce862 116 Gene3D G3DSA:3.30.1390.10 11 114 1.3E-24 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RB11195 b9394123e4605572bba8bc116bbb27cf 467 Gene3D G3DSA:2.20.25.100 50 84 0.001 T 11-11-2016 IPR023407 Ribosomal protein S27e, zinc-binding domain Reactome: R-HSA-6791226 RB1145 a7c3733074a3342c58a8c6149c2733a9 414 SUPERFAMILY SSF52540 147 365 7.44E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB1145 a7c3733074a3342c58a8c6149c2733a9 414 Gene3D G3DSA:3.40.50.300 147 362 1.9E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3504 e189abcdfa23f9ecf8c3a6552e706b0f 487 Pfam PF07632 Protein of unknown function (DUF1593) 74 317 1.7E-89 T 11-11-2016 IPR011483 Protein of unknown function DUF1593 RB3504 e189abcdfa23f9ecf8c3a6552e706b0f 487 SUPERFAMILY SSF53590 73 215 8.89E-14 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB1353 1f7710eb85a75c8588c387bc4791159f 453 Pfam PF01566 Natural resistance-associated macrophage protein 59 416 1.5E-42 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RB4377 5d0d8857f911e06f963bd39854dbf2cf 395 Pfam PF01594 Domain of unknown function DUF20 43 373 1.4E-44 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like RB11756 e07e8bc38ec7606013c8eb817995272c 273 Pfam PF13649 Methyltransferase domain 94 174 2.9E-7 T 11-11-2016 RB11756 e07e8bc38ec7606013c8eb817995272c 273 SUPERFAMILY SSF53335 11 223 1.01E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB11756 e07e8bc38ec7606013c8eb817995272c 273 PIRSF PIRSF018249 1 273 7.9E-81 T 11-11-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 RB11756 e07e8bc38ec7606013c8eb817995272c 273 Gene3D G3DSA:3.40.50.150 77 230 8.0E-19 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB12316 282fa72713f557c237b9e0b89e382245 294 Gene3D G3DSA:3.20.20.370 33 281 1.8E-18 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB12316 282fa72713f557c237b9e0b89e382245 294 SUPERFAMILY SSF88713 31 282 5.56E-27 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RB12316 282fa72713f557c237b9e0b89e382245 294 Pfam PF01522 Polysaccharide deacetylase 54 169 1.2E-13 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RB9952 5954241a4914c8a844f4018ed00c7259 266 SUPERFAMILY SSF64167 14 262 9.55E-74 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB9952 5954241a4914c8a844f4018ed00c7259 266 Gene3D G3DSA:3.40.1210.10 14 263 2.4E-79 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB9952 5954241a4914c8a844f4018ed00c7259 266 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 14 251 5.5E-62 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB9952 5954241a4914c8a844f4018ed00c7259 266 Pfam PF01975 Survival protein SurE 16 200 1.8E-52 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB9952 5954241a4914c8a844f4018ed00c7259 266 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 14 266 32.674 T 11-11-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RB5608 76ad44e952df7f9a1e8f2a68f005833a 459 Pfam PF06439 Domain of Unknown Function (DUF1080) 269 442 1.8E-28 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB3933 5f1c3349b890a6e73fdeaf0fa46415ec 145 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 1.8E-17 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RB598 46067cf2a5bc00ac04c53dbce8988f0d 446 Pfam PF07586 Protein of unknown function (DUF1552) 46 347 4.5E-88 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB3305 be1b300d45e623cc4efc969a2200a687 477 Pfam PF01435 Peptidase family M48 306 470 2.7E-7 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RB3305 be1b300d45e623cc4efc969a2200a687 477 Gene3D G3DSA:3.30.2010.10 306 359 2.0E-7 T 11-11-2016 RB6107 ebd697c4ddf10cde17a6bb67ce1b0813 706 SMART SM00306 558 652 0.0078 T 11-11-2016 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 RB6107 ebd697c4ddf10cde17a6bb67ce1b0813 706 SUPERFAMILY SSF51294 560 689 1.79E-21 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain RB6107 ebd697c4ddf10cde17a6bb67ce1b0813 706 Pfam PF07591 Pretoxin HINT domain 566 685 6.6E-13 T 11-11-2016 RB6107 ebd697c4ddf10cde17a6bb67ce1b0813 706 Gene3D G3DSA:2.170.16.10 560 689 1.9E-14 T 11-11-2016 IPR028992 Hedgehog/Intein (Hint) domain RB3635 37028c8e21a636795d21c5183ba80faa 429 Pfam PF06439 Domain of Unknown Function (DUF1080) 29 219 4.6E-42 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB3635 37028c8e21a636795d21c5183ba80faa 429 Pfam PF06439 Domain of Unknown Function (DUF1080) 251 415 1.1E-25 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB5749 7e3d30333b84c9f62acae40f2b7090b9 187 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 74 171 3.9E-29 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RB5749 7e3d30333b84c9f62acae40f2b7090b9 187 Pfam PF02410 Ribosomal silencing factor during starvation 76 171 1.9E-25 T 11-11-2016 RB5749 7e3d30333b84c9f62acae40f2b7090b9 187 SUPERFAMILY SSF81301 69 180 2.13E-33 T 11-11-2016 RB5749 7e3d30333b84c9f62acae40f2b7090b9 187 Gene3D G3DSA:3.30.460.10 69 174 3.6E-33 T 11-11-2016 RB5749 7e3d30333b84c9f62acae40f2b7090b9 187 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 69 172 23.123 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RB5302 3de4396a94d2cb32e666e1e6eca3bdaa 197 Pfam PF03729 Short repeat of unknown function (DUF308) 81 156 8.6E-10 T 11-11-2016 IPR005325 Protein of unknown function DUF308, membrane RB5302 3de4396a94d2cb32e666e1e6eca3bdaa 197 Pfam PF03729 Short repeat of unknown function (DUF308) 26 94 1.9E-9 T 11-11-2016 IPR005325 Protein of unknown function DUF308, membrane RB5302 3de4396a94d2cb32e666e1e6eca3bdaa 197 Pfam PF03729 Short repeat of unknown function (DUF308) 142 189 3.9E-6 T 11-11-2016 IPR005325 Protein of unknown function DUF308, membrane RB814 e73541fa7afa6c8a571cdabdc3063c0d 99 Pfam PF01527 Transposase 13 84 5.8E-10 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RB814 e73541fa7afa6c8a571cdabdc3063c0d 99 SUPERFAMILY SSF46689 13 97 7.88E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB814 e73541fa7afa6c8a571cdabdc3063c0d 99 Gene3D G3DSA:1.10.10.60 17 92 1.7E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 RB9110 ce276fecb8c5232235b41b62cceefd41 583 Pfam PF13360 PQQ-like domain 98 273 6.1E-5 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB9110 ce276fecb8c5232235b41b62cceefd41 583 Pfam PF13360 PQQ-like domain 360 480 1.8E-7 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB9110 ce276fecb8c5232235b41b62cceefd41 583 SUPERFAMILY SSF50998 213 506 6.08E-27 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB9110 ce276fecb8c5232235b41b62cceefd41 583 SMART SM00564 372 404 10.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB9110 ce276fecb8c5232235b41b62cceefd41 583 SMART SM00564 451 483 470.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB9110 ce276fecb8c5232235b41b62cceefd41 583 SMART SM00564 412 444 56.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB9110 ce276fecb8c5232235b41b62cceefd41 583 Gene3D G3DSA:2.140.10.10 212 513 1.4E-24 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB2520 a8d111ca057aa588edf5518663f56272 68 Pfam PF07625 Protein of unknown function (DUF1586) 2 23 6.0E-13 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB1364 b8eb59570b095e21500127cbc44cd03e 470 SUPERFAMILY SSF53649 262 467 5.89E-18 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB1364 b8eb59570b095e21500127cbc44cd03e 470 SUPERFAMILY SSF53649 48 203 5.89E-18 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB1364 b8eb59570b095e21500127cbc44cd03e 470 Gene3D G3DSA:3.40.720.10 53 94 2.6E-5 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB12790 a7dba513b73f05691c3c63973e256f71 2396 ProSitePatterns PS00018 EF-hand calcium-binding domain. 928 940 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB12790 a7dba513b73f05691c3c63973e256f71 2396 ProSitePatterns PS00018 EF-hand calcium-binding domain. 605 617 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB6740 e18eb297c10e1fa53bf4844dc9844736 330 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 268 3.3E-22 T 11-11-2016 RB6740 e18eb297c10e1fa53bf4844dc9844736 330 Gene3D G3DSA:3.40.50.1000 62 77 2.5E-16 T 11-11-2016 IPR023214 HAD-like domain RB6740 e18eb297c10e1fa53bf4844dc9844736 330 Gene3D G3DSA:3.40.50.1000 160 299 2.5E-16 T 11-11-2016 IPR023214 HAD-like domain RB6740 e18eb297c10e1fa53bf4844dc9844736 330 SUPERFAMILY SSF56784 62 314 1.97E-25 T 11-11-2016 IPR023214 HAD-like domain RB5281 efe55ecabd1c85fdbcb2d487a6f83a94 543 SUPERFAMILY SSF53649 43 454 7.71E-132 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5281 efe55ecabd1c85fdbcb2d487a6f83a94 543 Gene3D G3DSA:3.40.720.10 43 397 8.9E-117 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5281 efe55ecabd1c85fdbcb2d487a6f83a94 543 Gene3D G3DSA:3.30.1120.10 398 461 1.0E-18 T 11-11-2016 RB5281 efe55ecabd1c85fdbcb2d487a6f83a94 543 ProSitePatterns PS00149 Sulfatases signature 2. 144 154 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB5281 efe55ecabd1c85fdbcb2d487a6f83a94 543 Pfam PF00884 Sulfatase 45 359 7.5E-81 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB1120 d6ece5f38629afa19fa789eda800d40b 651 SUPERFAMILY SSF56954 78 106 1.7E-44 T 11-11-2016 RB1120 d6ece5f38629afa19fa789eda800d40b 651 SUPERFAMILY SSF56954 156 216 1.7E-44 T 11-11-2016 RB1120 d6ece5f38629afa19fa789eda800d40b 651 SUPERFAMILY SSF56954 245 603 1.7E-44 T 11-11-2016 RB1120 d6ece5f38629afa19fa789eda800d40b 651 Pfam PF02321 Outer membrane efflux protein 165 380 4.8E-8 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB1120 d6ece5f38629afa19fa789eda800d40b 651 Pfam PF02321 Outer membrane efflux protein 415 600 1.4E-23 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB1120 d6ece5f38629afa19fa789eda800d40b 651 Gene3D G3DSA:1.20.1600.10 253 600 9.5E-29 T 11-11-2016 RB1120 d6ece5f38629afa19fa789eda800d40b 651 Gene3D G3DSA:1.20.1600.10 158 221 9.5E-29 T 11-11-2016 RB443 c77bb1b33ae5e2a1bceb848194a873e8 126 Pfam PF07618 Protein of unknown function (DUF1580) 37 93 1.4E-32 T 11-11-2016 IPR011474 Protein of unknown function DUF1580 RB9504 c42f62bb9f027333dafcd931d4408d02 317 SUPERFAMILY SSF53300 121 270 2.83E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A RB9504 c42f62bb9f027333dafcd931d4408d02 317 Pfam PF13519 von Willebrand factor type A domain 104 204 1.0E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB273 a15ff1fb965095a2813663f59513eba2 272 Pfam PF06439 Domain of Unknown Function (DUF1080) 54 229 7.8E-41 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB7104 a78f993e17bf98441f0aa01647909eb3 343 SMART SM00244 22 253 5.9E-4 T 11-11-2016 IPR001107 Band 7 domain RB7104 a78f993e17bf98441f0aa01647909eb3 343 SUPERFAMILY SSF117892 79 159 3.53E-7 T 11-11-2016 IPR001107 Band 7 domain RB7104 a78f993e17bf98441f0aa01647909eb3 343 Pfam PF01145 SPFH domain / Band 7 family 26 269 9.8E-23 T 11-11-2016 IPR001107 Band 7 domain RB9087 d43075465916f0cef39728446b9a4bed 181 Pfam PF13430 Domain of unknown function (DUF4112) 37 138 2.0E-32 T 11-11-2016 IPR025187 Protein of unknown function DUF4112 RB8022 92b2a0ff1e8f4918b259ac7b8a736b8e 443 Pfam PF07586 Protein of unknown function (DUF1552) 50 347 1.7E-81 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB4827 9876aae99b8b5343c972da7471bac5fd 1269 SUPERFAMILY SSF56672 97 159 6.23E-5 T 11-11-2016 RB4827 9876aae99b8b5343c972da7471bac5fd 1269 SUPERFAMILY SSF56672 201 331 6.23E-5 T 11-11-2016 RB4460 28a3c7583d50f7b7963cef93f2047621 422 Pfam PF10011 Predicted membrane protein (DUF2254) 14 392 1.0E-115 T 11-11-2016 IPR018723 Protein of unknown function DUF2254, membrane RB1179 ebd685f1dbb2bf638a2cb2fdd64b9067 128 Pfam PF07623 Protein of unknown function (DUF1584) 37 63 1.3E-15 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB2182 a9dbec7259499298de10670e0cb1688a 294 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 22 97 1.9E-27 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family RB2182 a9dbec7259499298de10670e0cb1688a 294 Pfam PF01609 Transposase DDE domain 118 268 6.1E-20 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB10778 8649e435ed9100437df645512a204e7e 535 SUPERFAMILY SSF52540 199 331 2.52E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB10778 8649e435ed9100437df645512a204e7e 535 Gene3D G3DSA:3.40.50.300 204 321 3.2E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB3967 2c41cf8e6f027f753288b5b54a467905 544 Pfam PF00474 Sodium:solute symporter family 41 158 7.0E-5 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB3967 2c41cf8e6f027f753288b5b54a467905 544 Pfam PF00474 Sodium:solute symporter family 194 471 7.5E-32 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB1523 5c8498034e4a25bae575ae74a232b82e 158 Gene3D G3DSA:2.60.40.920 53 97 7.5E-4 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RB1523 5c8498034e4a25bae575ae74a232b82e 158 SUPERFAMILY SSF49464 51 87 5.89E-5 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain RB4106 3e18a9b2e10a83a0e8f04eca1ece94d9 490 Pfam PF08357 SEFIR domain 13 143 5.5E-24 T 11-11-2016 IPR013568 SEFIR domain RB4106 3e18a9b2e10a83a0e8f04eca1ece94d9 490 SUPERFAMILY SSF52200 6 141 4.71E-5 T 11-11-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RB10680 f114be58eb02fc433ad2f9d0ce528f4f 463 Pfam PF13692 Glycosyl transferases group 1 282 414 4.0E-10 T 11-11-2016 RB10680 f114be58eb02fc433ad2f9d0ce528f4f 463 SUPERFAMILY SSF53756 55 382 1.31E-20 T 11-11-2016 RB7574 22559887944d7ec61aa9027071087974 271 Pfam PF04028 Domain of unknown function (DUF374) 48 114 1.3E-19 T 11-11-2016 IPR007172 Domain of unknown function DUF374 RB7574 22559887944d7ec61aa9027071087974 271 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 14 113 2.0E-40 T 11-11-2016 IPR007172 Domain of unknown function DUF374 RB398 84f591e938056a138631807d49f5f5ac 437 Pfam PF07586 Protein of unknown function (DUF1552) 53 335 4.3E-76 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB2855 9ffb7013f43539301abad43258959f50 471 Gene3D G3DSA:3.30.200.20 78 187 8.2E-25 T 11-11-2016 RB2855 9ffb7013f43539301abad43258959f50 471 Pfam PF00069 Protein kinase domain 91 342 3.4E-54 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2855 9ffb7013f43539301abad43258959f50 471 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 209 221 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RB2855 9ffb7013f43539301abad43258959f50 471 SUPERFAMILY SSF56112 88 427 3.37E-75 T 11-11-2016 IPR011009 Protein kinase-like domain RB2855 9ffb7013f43539301abad43258959f50 471 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 97 120 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 RB2855 9ffb7013f43539301abad43258959f50 471 SMART SM00220 91 352 7.0E-64 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RB2855 9ffb7013f43539301abad43258959f50 471 Gene3D G3DSA:1.10.510.10 188 347 2.5E-46 T 11-11-2016 RB941 a4bcf21fd5b981d318129201377ccfee 616 SUPERFAMILY SSF51905 20 196 5.79E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB941 a4bcf21fd5b981d318129201377ccfee 616 SUPERFAMILY SSF51905 423 486 5.79E-16 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB941 a4bcf21fd5b981d318129201377ccfee 616 Pfam PF12831 FAD dependent oxidoreductase 30 504 4.8E-115 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB941 a4bcf21fd5b981d318129201377ccfee 616 Gene3D G3DSA:3.50.50.60 347 361 8.5E-14 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB941 a4bcf21fd5b981d318129201377ccfee 616 Gene3D G3DSA:3.50.50.60 27 199 8.5E-14 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RB10679 4112e51957cfdf3c4d7ac97af5277072 557 Gene3D G3DSA:1.50.10.20 79 209 3.0E-13 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB10679 4112e51957cfdf3c4d7ac97af5277072 557 SUPERFAMILY SSF48371 423 515 7.82E-7 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB10679 4112e51957cfdf3c4d7ac97af5277072 557 SUPERFAMILY SSF48239 104 247 8.64E-19 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB10679 4112e51957cfdf3c4d7ac97af5277072 557 SUPERFAMILY SSF48239 338 378 8.64E-19 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB10679 4112e51957cfdf3c4d7ac97af5277072 557 Gene3D G3DSA:1.25.10.10 460 516 5.9E-6 T 11-11-2016 IPR011989 Armadillo-like helical RB6891 176a4596b561d8fd2ef58cb7e22c2f40 871 Pfam PF04932 O-Antigen ligase 332 473 2.5E-11 T 11-11-2016 IPR007016 O-antigen ligase-related RB7167 d3dfafd474dc0b8510b24102623a9dcc 194 SUPERFAMILY SSF54637 19 139 4.15E-25 T 11-11-2016 IPR029069 HotDog domain RB7167 d3dfafd474dc0b8510b24102623a9dcc 194 Pfam PF07977 FabA-like domain 20 133 2.4E-16 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RB7167 d3dfafd474dc0b8510b24102623a9dcc 194 Gene3D G3DSA:3.10.129.10 22 139 7.0E-27 T 11-11-2016 IPR029069 HotDog domain RB10314 9e2fe4837961e4e3cbfc2490ced2054e 1073 Hamap MF_01871 UPF0753 protein . 42 1013 21.631 T 11-11-2016 IPR018752 Uncharacterised protein family UPF0753 RB10314 9e2fe4837961e4e3cbfc2490ced2054e 1073 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 47 998 2.4E-244 T 11-11-2016 IPR018752 Uncharacterised protein family UPF0753 RB4846 03c0515a6ad01ca7f6c9f31138b719bf 692 Gene3D G3DSA:1.10.780.10 221 248 1.7E-16 T 11-11-2016 RB4846 03c0515a6ad01ca7f6c9f31138b719bf 692 Gene3D G3DSA:1.10.780.10 52 131 1.7E-16 T 11-11-2016 RB4846 03c0515a6ad01ca7f6c9f31138b719bf 692 Gene3D G3DSA:1.10.780.10 312 383 1.7E-16 T 11-11-2016 RB4846 03c0515a6ad01ca7f6c9f31138b719bf 692 Gene3D G3DSA:1.10.780.10 421 438 1.7E-16 T 11-11-2016 RB4846 03c0515a6ad01ca7f6c9f31138b719bf 692 SUPERFAMILY SSF48695 430 446 1.35E-16 T 11-11-2016 IPR011031 Multihaem cytochrome RB4846 03c0515a6ad01ca7f6c9f31138b719bf 692 SUPERFAMILY SSF48695 216 243 1.35E-16 T 11-11-2016 IPR011031 Multihaem cytochrome RB4846 03c0515a6ad01ca7f6c9f31138b719bf 692 SUPERFAMILY SSF48695 299 397 1.35E-16 T 11-11-2016 IPR011031 Multihaem cytochrome RB9973 17a58aae95ec9a34b4e4de0694d78720 547 Gene3D G3DSA:1.50.10.20 70 473 2.3E-83 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9973 17a58aae95ec9a34b4e4de0694d78720 547 Pfam PF09492 Pectic acid lyase 355 413 1.8E-5 T 11-11-2016 IPR012669 Pectic acid lyase RB9973 17a58aae95ec9a34b4e4de0694d78720 547 Pfam PF07640 QPP 1 34 2.5E-15 T 11-11-2016 IPR011507 QPP RB9973 17a58aae95ec9a34b4e4de0694d78720 547 SUPERFAMILY SSF81853 69 275 7.59E-65 T 11-11-2016 RB9973 17a58aae95ec9a34b4e4de0694d78720 547 SUPERFAMILY SSF81853 302 473 7.59E-65 T 11-11-2016 RB5417 3679dffef2883a9e7a2d71d4f6be3d60 480 Gene3D G3DSA:3.40.720.10 33 417 1.5E-98 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB5417 3679dffef2883a9e7a2d71d4f6be3d60 480 Gene3D G3DSA:3.30.1120.10 418 475 8.4E-17 T 11-11-2016 RB5417 3679dffef2883a9e7a2d71d4f6be3d60 480 SUPERFAMILY SSF53649 34 179 3.05E-110 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5417 3679dffef2883a9e7a2d71d4f6be3d60 480 SUPERFAMILY SSF53649 224 473 3.05E-110 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB5417 3679dffef2883a9e7a2d71d4f6be3d60 480 ProSitePatterns PS00149 Sulfatases signature 2. 132 142 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB5417 3679dffef2883a9e7a2d71d4f6be3d60 480 Pfam PF00884 Sulfatase 35 380 1.5E-67 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB11393 59d94febdbdba1b80ca569732e75cd9c 91 Gene3D G3DSA:1.10.1220.10 5 57 4.1E-6 T 11-11-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RB11393 59d94febdbdba1b80ca569732e75cd9c 91 SUPERFAMILY SSF47598 3 47 2.85E-7 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 RB11393 59d94febdbdba1b80ca569732e75cd9c 91 Pfam PF05534 HicB family 5 37 1.7E-5 T 11-11-2016 IPR008651 Uncharacterised protein family HicB RB4506 ccd9d2b9e6bda3a2df74d3a833c3a32f 263 PIRSF PIRSF000851 4 253 1.2E-80 T 11-11-2016 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 RB2897 00d4ef40ab0f8b251f0f2243c74cd823 246 Gene3D G3DSA:3.40.50.150 81 200 1.9E-14 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2897 00d4ef40ab0f8b251f0f2243c74cd823 246 Pfam PF13649 Methyltransferase domain 97 195 4.2E-8 T 11-11-2016 RB2897 00d4ef40ab0f8b251f0f2243c74cd823 246 SUPERFAMILY SSF53335 58 205 1.7E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2499 3c9011b93ef77df35d011e1233c6e000 392 SUPERFAMILY SSF53756 17 351 1.61E-25 T 11-11-2016 RB2499 3c9011b93ef77df35d011e1233c6e000 392 Pfam PF00534 Glycosyl transferases group 1 199 345 2.9E-12 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB7374 0131aaeafba1c31685d1f063a6eb61af 328 SUPERFAMILY SSF53474 114 321 4.09E-22 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7374 0131aaeafba1c31685d1f063a6eb61af 328 Gene3D G3DSA:3.40.50.1820 115 326 8.7E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB7374 0131aaeafba1c31685d1f063a6eb61af 328 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 149 218 2.2E-5 T 11-11-2016 IPR010297 Protein of unknown function DUF900, hydrolase-like RB1439 f1b0b3a6f786a1d11d15aae690b71e2c 142 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 82 132 1.9E-16 T 11-11-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 RB1427 3e7b35cb2fb62d6c4fd4faf69fad30c6 579 Pfam PF00361 Proton-conducting membrane transporter 117 395 1.7E-43 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1427 3e7b35cb2fb62d6c4fd4faf69fad30c6 579 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 123 142 8.5E-6 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1427 3e7b35cb2fb62d6c4fd4faf69fad30c6 579 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 153 177 8.5E-6 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1427 3e7b35cb2fb62d6c4fd4faf69fad30c6 579 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 304 323 8.5E-6 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1427 3e7b35cb2fb62d6c4fd4faf69fad30c6 579 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 225 249 8.5E-6 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB8637 88282c0c9e00fbc8ac81d1c5ac198cf9 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 31 101 1.6E-10 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RB8637 88282c0c9e00fbc8ac81d1c5ac198cf9 201 SUPERFAMILY SSF53254 29 182 1.04E-23 T 11-11-2016 IPR029033 Histidine phosphatase superfamily RB8637 88282c0c9e00fbc8ac81d1c5ac198cf9 201 SMART SM00855 30 154 6.0E-7 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RB8637 88282c0c9e00fbc8ac81d1c5ac198cf9 201 Gene3D G3DSA:3.40.50.1240 26 200 6.2E-51 T 11-11-2016 IPR029033 Histidine phosphatase superfamily RB3514 a7cfdb639312cae175f867e7d5a5b433 429 Pfam PF07632 Protein of unknown function (DUF1593) 37 278 5.7E-60 T 11-11-2016 IPR011483 Protein of unknown function DUF1593 RB3514 a7cfdb639312cae175f867e7d5a5b433 429 Gene3D G3DSA:3.90.245.10 35 181 7.9E-5 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB3514 a7cfdb639312cae175f867e7d5a5b433 429 SUPERFAMILY SSF53590 35 305 1.44E-22 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RB11854 a0caf924f63c33e2910ae29363dce29c 77 Pfam PF07628 Protein of unknown function (DUF1589) 1 54 5.8E-10 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB2626 7fccf1996c5384b2c1f65877358900bd 335 Gene3D G3DSA:3.40.50.150 270 306 2.0E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2626 7fccf1996c5384b2c1f65877358900bd 335 Gene3D G3DSA:3.40.50.150 118 237 2.0E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2626 7fccf1996c5384b2c1f65877358900bd 335 SUPERFAMILY SSF53335 119 306 7.32E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2626 7fccf1996c5384b2c1f65877358900bd 335 Pfam PF13489 Methyltransferase domain 110 299 1.2E-13 T 11-11-2016 RB1495 d33c1034cb9513f843833a7ff302c817 471 Pfam PF01882 Protein of unknown function DUF58 231 313 1.7E-15 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB1284 feba17c9d60ff469a5bd334b750d6cde 57 Gene3D G3DSA:1.25.40.20 10 47 3.1E-5 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB1284 feba17c9d60ff469a5bd334b750d6cde 57 SUPERFAMILY SSF48403 10 47 7.31E-5 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain RB11069 755881a1cd57c0a9a08efab4a4aa6452 589 Pfam PF00999 Sodium/hydrogen exchanger family 8 386 3.0E-45 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RB11069 755881a1cd57c0a9a08efab4a4aa6452 589 Pfam PF02080 TrkA-C domain 416 481 2.8E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB11069 755881a1cd57c0a9a08efab4a4aa6452 589 Gene3D G3DSA:3.30.70.1450 415 469 1.3E-4 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB11069 755881a1cd57c0a9a08efab4a4aa6452 589 SUPERFAMILY SSF116726 408 472 3.01E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RB2144 903eaaa295644058b82687fc66409c2d 317 SUPERFAMILY SSF48576 20 306 1.92E-80 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB2144 903eaaa295644058b82687fc66409c2d 317 Gene3D G3DSA:1.10.600.10 19 314 1.6E-89 T 11-11-2016 IPR008949 Isoprenoid synthase domain RB2144 903eaaa295644058b82687fc66409c2d 317 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 98 114 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 RB2144 903eaaa295644058b82687fc66409c2d 317 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 236 248 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 RB2144 903eaaa295644058b82687fc66409c2d 317 Pfam PF00348 Polyprenyl synthetase 47 285 2.9E-56 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 RB8163 97712c771d84775ef5aaa1f88ba9f40f 232 SUPERFAMILY SSF51219 31 226 9.42E-53 T 11-11-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain RB8163 97712c771d84775ef5aaa1f88ba9f40f 232 Pfam PF01987 Mitochondrial biogenesis AIM24 31 222 2.2E-34 T 11-11-2016 IPR002838 Mitochondrial biogenesis protein AIM24 RB8163 97712c771d84775ef5aaa1f88ba9f40f 232 Gene3D G3DSA:3.60.160.10 15 230 8.6E-47 T 11-11-2016 IPR002838 Mitochondrial biogenesis protein AIM24 RB2088 ef7995303addb52d60b46cef9c99cd1a 421 SUPERFAMILY SSF49899 371 419 1.22E-5 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2088 ef7995303addb52d60b46cef9c99cd1a 421 Gene3D G3DSA:2.60.120.200 373 416 1.3E-6 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB2088 ef7995303addb52d60b46cef9c99cd1a 421 Gene3D G3DSA:2.60.120.200 97 257 3.6E-4 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB9623 d6fbf142191c587b1cd38ee387049388 223 Pfam PF00535 Glycosyl transferase family 2 6 131 6.6E-34 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB9623 d6fbf142191c587b1cd38ee387049388 223 SUPERFAMILY SSF53448 5 211 2.4E-50 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9623 d6fbf142191c587b1cd38ee387049388 223 Gene3D G3DSA:3.90.550.10 5 211 1.4E-47 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB2364 d1d9137898b7836dc235d5bbb5f7cf23 262 Gene3D G3DSA:1.20.1540.10 53 227 6.3E-23 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB2364 d1d9137898b7836dc235d5bbb5f7cf23 262 Pfam PF01694 Rhomboid family 89 231 1.6E-20 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB2364 d1d9137898b7836dc235d5bbb5f7cf23 262 SUPERFAMILY SSF144091 53 232 1.57E-25 T 11-11-2016 RB2268 e6b7912733871112f3d4ed70c21f772e 282 Gene3D G3DSA:2.170.150.20 129 253 3.0E-47 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RB2268 e6b7912733871112f3d4ed70c21f772e 282 SUPERFAMILY SSF51316 130 252 6.28E-45 T 11-11-2016 IPR011057 Mss4-like RB2268 e6b7912733871112f3d4ed70c21f772e 282 Pfam PF01641 SelR domain 135 249 2.6E-40 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RB7672 66b39ef35087a8f22d9ede2adc042222 435 SUPERFAMILY SSF103473 5 329 4.05E-5 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB3694 8eb62e235a69f0814b436a005cca1c0f 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 1.2E-11 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB3694 8eb62e235a69f0814b436a005cca1c0f 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.2E-11 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB3694 8eb62e235a69f0814b436a005cca1c0f 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.2E-11 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB3694 8eb62e235a69f0814b436a005cca1c0f 281 Gene3D G3DSA:3.40.50.1820 2 275 1.9E-70 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3694 8eb62e235a69f0814b436a005cca1c0f 281 Pfam PF00561 alpha/beta hydrolase fold 24 254 5.0E-27 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 RB3694 8eb62e235a69f0814b436a005cca1c0f 281 SUPERFAMILY SSF53474 5 274 1.21E-64 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3694 8eb62e235a69f0814b436a005cca1c0f 281 PRINTS PR00412 Epoxide hydrolase signature 217 233 6.0E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB3694 8eb62e235a69f0814b436a005cca1c0f 281 PRINTS PR00412 Epoxide hydrolase signature 29 47 6.0E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB3694 8eb62e235a69f0814b436a005cca1c0f 281 PRINTS PR00412 Epoxide hydrolase signature 49 64 6.0E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RB4309 6a53471fe0d4ddb8406057465f53e50e 233 SUPERFAMILY SSF52540 3 226 6.72E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4309 6a53471fe0d4ddb8406057465f53e50e 233 Gene3D G3DSA:3.40.50.300 2 224 8.4E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB4309 6a53471fe0d4ddb8406057465f53e50e 233 Pfam PF00005 ABC transporter 23 171 1.8E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RB4309 6a53471fe0d4ddb8406057465f53e50e 233 SMART SM00382 32 220 1.3E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain RB3995 4cf427291af3b31f6535fbce7c9a587d 94 Pfam PF07590 Protein of unknown function (DUF1556) 1 93 8.9E-46 T 11-11-2016 IPR011450 Protein of unknown function DUF1556 RB17 8cac3fad56a00122f9238c54cf8ae6fb 164 Pfam PF07628 Protein of unknown function (DUF1589) 1 164 7.4E-116 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB4397 a45bdf47461d9cb9906c935a653d8d0e 55 Pfam PF07597 Protein of unknown function (DUF1560) 36 55 2.6E-8 T 11-11-2016 IPR011454 Protein of unknown function DUF1560 RB3274 f36adfa016530a77262a9b07d355260a 340 SUPERFAMILY SSF53474 52 287 6.49E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB3274 f36adfa016530a77262a9b07d355260a 340 Gene3D G3DSA:3.40.50.1820 90 303 1.0E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB9512 5b97a84c576a7f08d9ce6fbdafdeb460 323 Gene3D G3DSA:3.10.450.50 43 162 5.7E-10 T 11-11-2016 IPR032710 NTF2-like domain RB9512 5b97a84c576a7f08d9ce6fbdafdeb460 323 SUPERFAMILY SSF54427 42 153 1.66E-9 T 11-11-2016 IPR032710 NTF2-like domain RB3292 9bc07867e0a6fe311ef84aae4690adf3 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 5 410 1.2E-155 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 RB3292 9bc07867e0a6fe311ef84aae4690adf3 427 Gene3D G3DSA:3.40.640.10 54 320 1.4E-83 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB3292 9bc07867e0a6fe311ef84aae4690adf3 427 Gene3D G3DSA:3.90.1150.10 4 53 1.6E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB3292 9bc07867e0a6fe311ef84aae4690adf3 427 Gene3D G3DSA:3.90.1150.10 322 414 1.6E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB3292 9bc07867e0a6fe311ef84aae4690adf3 427 Pfam PF00202 Aminotransferase class-III 13 409 2.5E-109 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RB3292 9bc07867e0a6fe311ef84aae4690adf3 427 SUPERFAMILY SSF53383 4 412 3.35E-111 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB12519 84ac14e4084d5876f4eb6a2934038745 365 Gene3D G3DSA:2.40.50.100 204 235 1.1E-7 T 11-11-2016 RB12519 84ac14e4084d5876f4eb6a2934038745 365 Gene3D G3DSA:2.40.50.100 67 100 1.1E-7 T 11-11-2016 RB12519 84ac14e4084d5876f4eb6a2934038745 365 Pfam PF13437 HlyD family secretion protein 208 304 5.3E-8 T 11-11-2016 RB9585 7e697356627af6206542c0c6bf01f970 328 SUPERFAMILY SSF51679 26 324 1.7E-63 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RB9585 7e697356627af6206542c0c6bf01f970 328 Pfam PF00296 Luciferase-like monooxygenase 30 249 1.2E-41 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RB9585 7e697356627af6206542c0c6bf01f970 328 Gene3D G3DSA:3.20.20.30 15 323 1.3E-65 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RB9585 7e697356627af6206542c0c6bf01f970 328 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 18 322 5.5E-124 T 11-11-2016 IPR020020 Luciferase-type oxidoreductase RB10785 315628a269efbb1649ce4bf441d80b06 429 Gene3D G3DSA:1.10.150.130 101 177 4.6E-4 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal RB10785 315628a269efbb1649ce4bf441d80b06 429 SUPERFAMILY SSF56349 333 419 1.02E-28 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB10785 315628a269efbb1649ce4bf441d80b06 429 SUPERFAMILY SSF56349 85 291 1.02E-28 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RB10785 315628a269efbb1649ce4bf441d80b06 429 Gene3D G3DSA:1.10.443.10 338 415 2.0E-21 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB10785 315628a269efbb1649ce4bf441d80b06 429 Gene3D G3DSA:1.10.443.10 213 300 2.0E-21 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB10785 315628a269efbb1649ce4bf441d80b06 429 Pfam PF00589 Phage integrase family 220 415 2.8E-7 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RB11641 49bd64f9f521fcbc9d2c7d047fd4e645 297 Pfam PF14267 Domain of unknown function (DUF4357) 234 284 1.7E-17 T 11-11-2016 IPR025579 Domain of unknown function DUF4357 RB11617 49bd64f9f521fcbc9d2c7d047fd4e645 297 Pfam PF14267 Domain of unknown function (DUF4357) 234 284 1.7E-17 T 11-11-2016 IPR025579 Domain of unknown function DUF4357 RB393 c48b1f613d6e4b23fbd03662a801e661 654 Gene3D G3DSA:2.10.230.10 581 646 6.2E-4 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RB393 c48b1f613d6e4b23fbd03662a801e661 654 Gene3D G3DSA:2.40.10.10 430 520 3.0E-5 T 11-11-2016 RB393 c48b1f613d6e4b23fbd03662a801e661 654 SUPERFAMILY SSF50494 389 528 2.28E-15 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB393 c48b1f613d6e4b23fbd03662a801e661 654 SUPERFAMILY SSF50494 322 362 2.28E-15 T 11-11-2016 IPR009003 Peptidase S1, PA clan RB7000 71ec1a69339f62ad9ba031659420a9d4 347 SUPERFAMILY SSF82771 260 345 3.01E-7 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily RB7000 71ec1a69339f62ad9ba031659420a9d4 347 Pfam PF01541 GIY-YIG catalytic domain 262 341 3.1E-5 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily RB7088 2ccf60d8053c55b02dfe182c10c4f2a6 90 Pfam PF01192 RNA polymerase Rpb6 9 59 1.8E-6 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RB7088 2ccf60d8053c55b02dfe182c10c4f2a6 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 2 62 11.582 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RB7088 2ccf60d8053c55b02dfe182c10c4f2a6 90 SUPERFAMILY SSF63562 7 64 9.77E-8 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RB3994 ad74098c3363585395e75b87c6ebdb05 191 Gene3D G3DSA:3.80.10.10 35 148 3.1E-10 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB3994 ad74098c3363585395e75b87c6ebdb05 191 SUPERFAMILY SSF52047 41 148 2.25E-11 T 11-11-2016 RB885 3c2de0c3e3ffbf613bd698f686431cca 599 Pfam PF07585 Putative beta barrel porin-7 (BBP7) 256 599 2.1E-129 T 11-11-2016 IPR011446 Putative beta barrel porin-7 RB6793 52ba0c4d838340745437bebdb1f6ed1d 350 SUPERFAMILY SSF103481 64 160 3.01E-11 T 11-11-2016 RB6793 52ba0c4d838340745437bebdb1f6ed1d 350 Pfam PF00892 EamA-like transporter family 13 159 9.4E-9 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RB9011 8b2e3dd2cf0f2158f245ab91e6ac82b8 355 SUPERFAMILY SSF48239 320 352 6.87E-28 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9011 8b2e3dd2cf0f2158f245ab91e6ac82b8 355 SUPERFAMILY SSF48239 43 277 6.87E-28 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB9011 8b2e3dd2cf0f2158f245ab91e6ac82b8 355 Gene3D G3DSA:1.50.10.20 45 296 6.7E-16 T 11-11-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RB12495 385a5fe2d48c6f3da81ce56dc3d983c7 576 Pfam PF02120 Flagellar hook-length control protein FliK 431 508 2.3E-18 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal RB10159 f9a92e6cbab491a4222611b6cad4fc7f 709 Pfam PF00404 Dockerin type I repeat 629 649 5.2E-7 T 11-11-2016 IPR002105 Dockerin type I repeat GO:0000272|GO:0004553 RB10159 f9a92e6cbab491a4222611b6cad4fc7f 709 Pfam PF07595 Planctomycete extracellular 28 50 3.6E-4 T 11-11-2016 IPR011506 Planctomycete extracellular RB370 568c4b4094d4351ad3a7756232af3c0b 553 Pfam PF13379 NMT1-like family 124 404 1.4E-92 T 11-11-2016 RB370 568c4b4094d4351ad3a7756232af3c0b 553 SUPERFAMILY SSF53850 126 388 2.78E-20 T 11-11-2016 RB12362 feaee5a68132551814bdab8a933dec85 274 SUPERFAMILY SSF52833 100 272 2.32E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12362 feaee5a68132551814bdab8a933dec85 274 Gene3D G3DSA:3.40.30.10 95 271 6.3E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold RB12362 feaee5a68132551814bdab8a933dec85 274 Pfam PF00578 AhpC/TSA family 101 246 7.1E-33 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RB13074 3c4e216ee15335228f41bb28358c6d09 297 Pfam PF00482 Type II secretion system (T2SS), protein F 130 254 5.4E-15 T 11-11-2016 IPR018076 Type II secretion system F domain RB6707 9bbe03961dae2bd992632165d81098f3 656 Pfam PF01609 Transposase DDE domain 280 446 7.7E-18 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RB6707 9bbe03961dae2bd992632165d81098f3 656 SUPERFAMILY SSF53098 159 490 6.98E-35 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 PRINTS PR00783 Major intrinsic protein family signature 104 123 8.6E-47 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 PRINTS PR00783 Major intrinsic protein family signature 160 178 8.6E-47 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 PRINTS PR00783 Major intrinsic protein family signature 66 90 8.6E-47 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 PRINTS PR00783 Major intrinsic protein family signature 204 226 8.6E-47 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 PRINTS PR00783 Major intrinsic protein family signature 251 271 8.6E-47 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 PRINTS PR00783 Major intrinsic protein family signature 24 43 8.6E-47 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 ProSitePatterns PS00221 MIP family signature. 84 92 - T 11-11-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 TIGRFAM TIGR00861 MIP: MIP family channel proteins 28 267 2.5E-51 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 SUPERFAMILY SSF81338 23 270 1.57E-63 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 Gene3D G3DSA:1.20.1080.10 19 270 3.0E-79 T 11-11-2016 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RB8872 6057adda60f6fa0ef0cfb595b158aea2 271 Pfam PF00230 Major intrinsic protein 23 267 1.5E-45 T 11-11-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RB7836 870bdb403c6e935779cbc1358f8722c8 107 SUPERFAMILY SSF54189 18 107 8.63E-29 T 11-11-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RB7836 870bdb403c6e935779cbc1358f8722c8 107 Pfam PF00276 Ribosomal protein L23 20 106 3.9E-30 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RB7836 870bdb403c6e935779cbc1358f8722c8 107 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 19 107 18.586 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RB7836 870bdb403c6e935779cbc1358f8722c8 107 Gene3D G3DSA:3.30.70.330 17 107 5.6E-31 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RB8707 5b6bd9f56fd8b842d8bae2076d418c99 362 Pfam PF00482 Type II secretion system (T2SS), protein F 232 353 1.6E-11 T 11-11-2016 IPR018076 Type II secretion system F domain RB8707 5b6bd9f56fd8b842d8bae2076d418c99 362 PRINTS PR00812 Bacterial general secretion pathway protein F signature 342 361 2.4E-7 T 11-11-2016 IPR003004 GspF/PilC family RB8707 5b6bd9f56fd8b842d8bae2076d418c99 362 PRINTS PR00812 Bacterial general secretion pathway protein F signature 124 152 2.4E-7 T 11-11-2016 IPR003004 GspF/PilC family RB723 3d5adb941c01ae21012cba7c8dccd7d9 60 Pfam PF07623 Protein of unknown function (DUF1584) 4 28 1.0E-17 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB9685 7d90cf63d3235e43e29bcf74f1507e0b 577 Pfam PF14331 ImcF-related N-terminal domain 301 553 6.5E-30 T 11-11-2016 IPR025743 ImcF-related, N-terminal domain RB12282 44ff0a8ae531f1ad3326bb1190973faf 435 Pfam PF01594 Domain of unknown function DUF20 73 397 4.2E-37 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like RB4420 12d1fd61a4dc087030bb6d66b3f5abb3 206 Pfam PF09335 SNARE associated Golgi protein 30 159 1.1E-21 T 11-11-2016 IPR032816 SNARE associated Golgi protein RB7491 ab2c3729aee643ad19b6e72ad56a8f3f 293 Gene3D G3DSA:2.60.120.620 3 235 5.0E-64 T 11-11-2016 RB7491 ab2c3729aee643ad19b6e72ad56a8f3f 293 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 13 213 2.3E-36 T 11-11-2016 IPR008775 Phytanoyl-CoA dioxygenase RB7491 ab2c3729aee643ad19b6e72ad56a8f3f 293 SUPERFAMILY SSF51197 1 243 9.16E-59 T 11-11-2016 RB7538 9be3a33b599d1d9bfed4ab28acae4ea9 667 SUPERFAMILY SSF50998 2 365 5.81E-43 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB7538 9be3a33b599d1d9bfed4ab28acae4ea9 667 Pfam PF13360 PQQ-like domain 20 221 1.1E-20 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB7538 9be3a33b599d1d9bfed4ab28acae4ea9 667 Pfam PF13360 PQQ-like domain 239 355 3.3E-5 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB7538 9be3a33b599d1d9bfed4ab28acae4ea9 667 Gene3D G3DSA:2.140.10.10 2 365 6.7E-45 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB12521 7c7620b34278b778a938e80080804b1d 726 Gene3D G3DSA:2.40.50.100 446 479 7.8E-5 T 11-11-2016 RB12521 7c7620b34278b778a938e80080804b1d 726 Gene3D G3DSA:2.40.50.100 532 541 7.8E-5 T 11-11-2016 RB2749 89e53b6f8d3fec2c7a5f20622bef347b 305 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 3 303 2.4E-74 T 11-11-2016 IPR006371 4-hydroxybenzoate polyprenyltransferase-related RB2749 89e53b6f8d3fec2c7a5f20622bef347b 305 Pfam PF01040 UbiA prenyltransferase family 23 287 7.6E-40 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RB1336 7f6f64374d32fb21c2941eecf769d894 220 SUPERFAMILY SSF141371 120 205 7.65E-5 T 11-11-2016 RB1336 7f6f64374d32fb21c2941eecf769d894 220 SUPERFAMILY SSF141371 29 112 2.55E-5 T 11-11-2016 RB1336 7f6f64374d32fb21c2941eecf769d894 220 Pfam PF07238 PilZ domain 121 207 3.4E-8 T 11-11-2016 IPR009875 PilZ domain GO:0035438 RB1336 7f6f64374d32fb21c2941eecf769d894 220 Pfam PF07238 PilZ domain 14 112 1.2E-9 T 11-11-2016 IPR009875 PilZ domain GO:0035438 RB3430 e3f1ee67bca6b4c0b2c5f84c70c9436f 248 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 31 241 2.8E-27 T 11-11-2016 RB2279 01475ecee8da88286e8173f5d6d5ac6e 253 Gene3D G3DSA:3.40.630.40 54 242 5.2E-12 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RB2279 01475ecee8da88286e8173f5d6d5ac6e 253 SUPERFAMILY SSF53187 3 230 3.77E-11 T 11-11-2016 RB8639 858e91e093ce39b0f03d4c237f8391f1 459 SMART SM00564 80 131 62.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB8639 858e91e093ce39b0f03d4c237f8391f1 459 SMART SM00564 148 179 17.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB8639 858e91e093ce39b0f03d4c237f8391f1 459 SMART SM00564 331 364 1.1 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB8639 858e91e093ce39b0f03d4c237f8391f1 459 SMART SM00564 197 230 23.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RB8639 858e91e093ce39b0f03d4c237f8391f1 459 SUPERFAMILY SSF50998 33 402 4.58E-57 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB8639 858e91e093ce39b0f03d4c237f8391f1 459 Gene3D G3DSA:2.140.10.10 23 455 1.7E-53 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB8639 858e91e093ce39b0f03d4c237f8391f1 459 Pfam PF13360 PQQ-like domain 195 362 3.4E-15 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB8639 858e91e093ce39b0f03d4c237f8391f1 459 Pfam PF13360 PQQ-like domain 67 184 7.5E-13 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB7453 adac40e34863f6b77623e735fe5e0e8e 381 Pfam PF00266 Aminotransferase class-V 4 307 1.6E-55 T 11-11-2016 IPR000192 Aminotransferase class V domain RB7453 adac40e34863f6b77623e735fe5e0e8e 381 PIRSF PIRSF005572 1 380 5.1E-121 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RB7453 adac40e34863f6b77623e735fe5e0e8e 381 Gene3D G3DSA:3.90.1150.10 252 374 6.1E-18 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RB7453 adac40e34863f6b77623e735fe5e0e8e 381 SUPERFAMILY SSF53383 3 376 9.21E-81 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase RB7453 adac40e34863f6b77623e735fe5e0e8e 381 Gene3D G3DSA:3.40.640.10 16 251 1.4E-69 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RB11898 7a9e7c5661fb12f4ae90b48999b7bc97 119 Pfam PF06305 Protein of unknown function (DUF1049) 23 83 2.3E-12 T 11-11-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 RB6977 c6420b616161e8ebe1895a0351e20053 483 Gene3D G3DSA:3.90.550.10 17 438 3.5E-128 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6977 c6420b616161e8ebe1895a0351e20053 483 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 102 412 1.1E-47 T 11-11-2016 IPR002618 UDPGP family GO:0008152|GO:0070569 RB6977 c6420b616161e8ebe1895a0351e20053 483 SUPERFAMILY SSF53448 16 458 3.44E-136 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9658 34c0b2ea48d01571c26f82ee72415ce8 183 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 83 145 2.1E-33 T 11-11-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 RB9658 34c0b2ea48d01571c26f82ee72415ce8 183 Gene3D G3DSA:1.10.720.30 91 148 1.6E-30 T 11-11-2016 IPR003034 SAP domain RB10948 8e60a4d4b327a0c19c4d0c9030b3c72f 153 Gene3D G3DSA:1.20.120.20 52 114 6.6E-5 T 11-11-2016 RB6108 61aa36fc10d26d4c668a55465bc035d9 1096 Gene3D G3DSA:1.25.40.10 454 470 2.7E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6108 61aa36fc10d26d4c668a55465bc035d9 1096 Gene3D G3DSA:1.25.40.10 72 151 2.7E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB6108 61aa36fc10d26d4c668a55465bc035d9 1096 Gene3D G3DSA:1.25.40.10 383 405 2.7E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2491 406faa538dd34474925b5c3caea7b01b 148 SUPERFAMILY SSF53335 11 89 5.63E-9 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB2491 406faa538dd34474925b5c3caea7b01b 148 Gene3D G3DSA:3.40.50.150 29 97 2.6E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB3467 b92839d7dfc92300f123347b4d6e3e78 205 Pfam PF07629 Protein of unknown function (DUF1590) 170 201 2.7E-22 T 11-11-2016 IPR011481 Protein of unknown function DUF1590 RB2283 b92839d7dfc92300f123347b4d6e3e78 205 Pfam PF07629 Protein of unknown function (DUF1590) 170 201 2.7E-22 T 11-11-2016 IPR011481 Protein of unknown function DUF1590 RB6428 5e08ee839fbc34ac6ba460b1239a9aa9 164 Gene3D G3DSA:2.30.180.10 29 162 3.4E-41 T 11-11-2016 IPR000782 FAS1 domain RB6428 5e08ee839fbc34ac6ba460b1239a9aa9 164 Pfam PF02469 Fasciclin domain 39 161 1.3E-35 T 11-11-2016 IPR000782 FAS1 domain RB6428 5e08ee839fbc34ac6ba460b1239a9aa9 164 SUPERFAMILY SSF82153 18 162 7.19E-40 T 11-11-2016 IPR000782 FAS1 domain RB6428 5e08ee839fbc34ac6ba460b1239a9aa9 164 SMART SM00554 63 162 6.5E-33 T 11-11-2016 IPR000782 FAS1 domain RB12925 e6159416dffb188bf263b647c002d9ca 39 Pfam PF07597 Protein of unknown function (DUF1560) 20 39 4.0E-10 T 11-11-2016 IPR011454 Protein of unknown function DUF1560 RB9447 8a212044e8b064271e3be5fa8a5b6ade 184 Gene3D G3DSA:3.40.630.30 16 162 4.8E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB9447 8a212044e8b064271e3be5fa8a5b6ade 184 Pfam PF00583 Acetyltransferase (GNAT) family 102 161 2.6E-14 T 11-11-2016 IPR000182 GNAT domain GO:0008080 RB9447 8a212044e8b064271e3be5fa8a5b6ade 184 SUPERFAMILY SSF55729 32 162 2.87E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase RB1677 d1f839e6b2647a25e764e5a7f25f6df4 688 Pfam PF02321 Outer membrane efflux protein 155 386 1.7E-8 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB1677 d1f839e6b2647a25e764e5a7f25f6df4 688 Pfam PF02321 Outer membrane efflux protein 414 613 1.5E-9 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB1677 d1f839e6b2647a25e764e5a7f25f6df4 688 SUPERFAMILY SSF56954 151 204 9.29E-46 T 11-11-2016 RB1677 d1f839e6b2647a25e764e5a7f25f6df4 688 SUPERFAMILY SSF56954 252 624 9.29E-46 T 11-11-2016 RB1677 d1f839e6b2647a25e764e5a7f25f6df4 688 Gene3D G3DSA:1.20.1600.10 149 211 3.8E-35 T 11-11-2016 RB1677 d1f839e6b2647a25e764e5a7f25f6df4 688 Gene3D G3DSA:1.20.1600.10 255 617 3.8E-35 T 11-11-2016 RB10033 92bb999e7a5bb2084ad903660c376f5c 326 Gene3D G3DSA:3.60.21.10 175 210 2.7E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10033 92bb999e7a5bb2084ad903660c376f5c 326 Gene3D G3DSA:3.60.21.10 260 308 2.7E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10033 92bb999e7a5bb2084ad903660c376f5c 326 Gene3D G3DSA:3.60.21.10 58 141 2.7E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10033 92bb999e7a5bb2084ad903660c376f5c 326 SUPERFAMILY SSF56300 264 313 3.8E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10033 92bb999e7a5bb2084ad903660c376f5c 326 SUPERFAMILY SSF56300 58 139 3.8E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10033 92bb999e7a5bb2084ad903660c376f5c 326 SUPERFAMILY SSF56300 196 207 3.8E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like RB10033 92bb999e7a5bb2084ad903660c376f5c 326 Pfam PF00149 Calcineurin-like phosphoesterase 58 291 4.9E-5 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RB11524 2dadc8acfaf75dfc163c2c43a0427d7c 285 Pfam PF13353 4Fe-4S single cluster domain 28 121 5.7E-6 T 11-11-2016 RB11524 2dadc8acfaf75dfc163c2c43a0427d7c 285 Pfam PF04055 Radical SAM superfamily 30 153 3.1E-8 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RB11524 2dadc8acfaf75dfc163c2c43a0427d7c 285 SUPERFAMILY SSF102114 22 155 5.89E-17 T 11-11-2016 RB11524 2dadc8acfaf75dfc163c2c43a0427d7c 285 Gene3D G3DSA:3.20.20.70 17 156 5.7E-16 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB1033 d305e5350369e34552d83fce2beb9009 300 Pfam PF13036 Peptidoglycan-synthase activator LpoB 120 269 2.4E-9 T 11-11-2016 IPR014094 Penicillin-binding protein activator LpoB RB8116 0eff7d3f1256631907346a56fd7c7f07 165 SUPERFAMILY SSF46785 20 96 1.63E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8116 0eff7d3f1256631907346a56fd7c7f07 165 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 90 4.9E-10 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RB8116 0eff7d3f1256631907346a56fd7c7f07 165 Gene3D G3DSA:1.10.10.10 18 91 1.0E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB8116 0eff7d3f1256631907346a56fd7c7f07 165 SMART SM00345 31 90 7.1E-5 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RB4215 bb1aae6a377b03bde281625bf8a46007 110 SUPERFAMILY SSF53041 6 54 1.57E-7 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RB4215 bb1aae6a377b03bde281625bf8a46007 110 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 11-11-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RB4215 bb1aae6a377b03bde281625bf8a46007 110 Pfam PF00239 Resolvase, N terminal domain 6 54 9.9E-8 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RB4215 bb1aae6a377b03bde281625bf8a46007 110 Gene3D G3DSA:3.40.50.1390 6 55 2.1E-6 T 11-11-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RB3484 b4f79cd032ef3a3f63a36ffe7597af2a 404 Pfam PF00482 Type II secretion system (T2SS), protein F 69 192 1.8E-27 T 11-11-2016 IPR018076 Type II secretion system F domain RB3484 b4f79cd032ef3a3f63a36ffe7597af2a 404 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 2.0E-26 T 11-11-2016 IPR018076 Type II secretion system F domain RB3484 b4f79cd032ef3a3f63a36ffe7597af2a 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.6E-16 T 11-11-2016 IPR003004 GspF/PilC family RB3484 b4f79cd032ef3a3f63a36ffe7597af2a 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 4.6E-16 T 11-11-2016 IPR003004 GspF/PilC family RB3484 b4f79cd032ef3a3f63a36ffe7597af2a 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.6E-16 T 11-11-2016 IPR003004 GspF/PilC family RB3484 b4f79cd032ef3a3f63a36ffe7597af2a 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 4.6E-16 T 11-11-2016 IPR003004 GspF/PilC family RB2204 93c0df534b5c9eb202a5ebc74af8dfd4 299 Gene3D G3DSA:3.40.50.300 1 283 5.3E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2204 93c0df534b5c9eb202a5ebc74af8dfd4 299 SUPERFAMILY SSF52540 1 283 7.4E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB2204 93c0df534b5c9eb202a5ebc74af8dfd4 299 Pfam PF13614 AAA domain 3 201 1.0E-26 T 11-11-2016 IPR025669 AAA domain RB9617 b363aa273c9f34dd7adc871482802f81 398 Gene3D G3DSA:3.40.50.2000 195 367 8.9E-21 T 11-11-2016 RB9617 b363aa273c9f34dd7adc871482802f81 398 Pfam PF00534 Glycosyl transferases group 1 208 366 1.5E-24 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB9617 b363aa273c9f34dd7adc871482802f81 398 SUPERFAMILY SSF53756 25 386 3.95E-56 T 11-11-2016 RB4993 37770a287536e17b10f0efe457dcb43e 361 Gene3D G3DSA:3.40.50.1110 61 301 2.0E-17 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB4993 37770a287536e17b10f0efe457dcb43e 361 SUPERFAMILY SSF52266 61 308 2.33E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB4993 37770a287536e17b10f0efe457dcb43e 361 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 66 295 4.8E-13 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB12267 76798b66ba1d76913fb533f92ab69217 84 Pfam PF12088 Protein of unknown function (DUF3565) 14 70 2.3E-32 T 11-11-2016 IPR021948 Protein of unknown function DUF3565 RB11619 e3d6e1495eb4b13564246dee8fad88c4 393 SUPERFAMILY SSF116734 5 203 9.97E-39 T 11-11-2016 RB11619 e3d6e1495eb4b13564246dee8fad88c4 393 SUPERFAMILY SSF116734 199 393 2.78E-32 T 11-11-2016 RB11619 e3d6e1495eb4b13564246dee8fad88c4 393 Pfam PF01420 Type I restriction modification DNA specificity domain 10 176 8.2E-12 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RB11619 e3d6e1495eb4b13564246dee8fad88c4 393 Pfam PF01420 Type I restriction modification DNA specificity domain 207 377 9.9E-18 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RB835 ec56c149e1f0ac6466dd79eac902d2a8 631 Gene3D G3DSA:2.40.50.100 296 328 2.5E-11 T 11-11-2016 RB835 ec56c149e1f0ac6466dd79eac902d2a8 631 Gene3D G3DSA:2.40.50.100 147 180 2.5E-11 T 11-11-2016 RB835 ec56c149e1f0ac6466dd79eac902d2a8 631 SUPERFAMILY SSF111369 132 193 1.83E-10 T 11-11-2016 RB835 ec56c149e1f0ac6466dd79eac902d2a8 631 SUPERFAMILY SSF111369 283 423 1.83E-10 T 11-11-2016 RB835 ec56c149e1f0ac6466dd79eac902d2a8 631 SUPERFAMILY SSF111369 222 246 1.83E-10 T 11-11-2016 RB835 ec56c149e1f0ac6466dd79eac902d2a8 631 Pfam PF13437 HlyD family secretion protein 299 348 2.7E-6 T 11-11-2016 RB5581 7231669a251399d1b7696f6ec41fdd9c 397 Pfam PF03781 Sulfatase-modifying factor enzyme 1 132 292 7.5E-16 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB5581 7231669a251399d1b7696f6ec41fdd9c 397 Gene3D G3DSA:3.90.1580.10 76 364 3.6E-27 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB5581 7231669a251399d1b7696f6ec41fdd9c 397 SUPERFAMILY SSF56436 89 330 1.6E-27 T 11-11-2016 IPR016187 C-type lectin fold RB9161 66f1eb53e832309d7fd48e93f89f48fa 257 Gene3D G3DSA:3.40.390.10 39 252 1.3E-34 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RB9161 66f1eb53e832309d7fd48e93f89f48fa 257 SUPERFAMILY SSF55486 46 252 4.39E-28 T 11-11-2016 RB11461 f37906905bfa86409dc0e7f8c0b3d246 152 Pfam PF07606 Protein of unknown function (DUF1569) 1 150 1.6E-56 T 11-11-2016 IPR011463 Protein of unknown function DUF1569 RB12785 19472103e27bf6421825440e754e796b 407 SUPERFAMILY SSF54523 11 69 8.63E-7 T 11-11-2016 RB12785 19472103e27bf6421825440e754e796b 407 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 27 1.4E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB8345 1318a13ebf59133d0f6e7d7f27eb5a08 447 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 119 447 6.2E-79 T 11-11-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 RB8345 1318a13ebf59133d0f6e7d7f27eb5a08 447 SUPERFAMILY SSF56935 149 445 3.14E-9 T 11-11-2016 RB10138 2a41be65b0062af97dc103f0abd521f6 267 Pfam PF06439 Domain of Unknown Function (DUF1080) 57 264 1.3E-26 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB12732 71802cf5f7a144b0690725d0a8b9f526 422 Pfam PF07394 Protein of unknown function (DUF1501) 46 421 3.0E-106 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB12732 71802cf5f7a144b0690725d0a8b9f526 422 SUPERFAMILY SSF53649 251 398 7.85E-14 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7535 2365d09d7d9a3d71379d9be1d919a33c 136 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 90 101 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RB11920 f4df8b28e69c23100d3184af7e2e543c 249 Pfam PF04298 Putative neutral zinc metallopeptidase 29 242 1.8E-81 T 11-11-2016 IPR007395 Putative neutral zinc metallopeptidase RB127 ebfa8385e822d9b789275a4debe20b6d 350 Pfam PF00482 Type II secretion system (T2SS), protein F 27 145 6.8E-13 T 11-11-2016 IPR018076 Type II secretion system F domain RB8068 4ecee2f2a97a877445df4ab6f78cb04c 215 Gene3D G3DSA:2.60.40.10 39 133 4.1E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB4504 92cf474fd68f2d97ef99193cc2920253 181 Gene3D G3DSA:3.30.240.20 90 162 1.2E-18 T 11-11-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain RB4504 92cf474fd68f2d97ef99193cc2920253 181 Pfam PF04239 Protein of unknown function (DUF421) 98 165 2.3E-11 T 11-11-2016 IPR007353 Protein of unknown function DUF421 RB11751 f4dee43a9305cfc272c58525c8c96424 167 SUPERFAMILY SSF143422 2 118 6.02E-10 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB11751 f4dee43a9305cfc272c58525c8c96424 167 Gene3D G3DSA:3.30.70.1290 20 115 4.3E-4 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RB9646 587a1d8d5abbd04dd635b2d8af31c0c0 637 Pfam PF02321 Outer membrane efflux protein 395 567 7.9E-11 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB9646 587a1d8d5abbd04dd635b2d8af31c0c0 637 Pfam PF02321 Outer membrane efflux protein 149 341 5.8E-10 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RB9646 587a1d8d5abbd04dd635b2d8af31c0c0 637 Gene3D G3DSA:1.20.1600.10 250 580 3.6E-29 T 11-11-2016 RB9646 587a1d8d5abbd04dd635b2d8af31c0c0 637 SUPERFAMILY SSF56954 12 40 1.02E-41 T 11-11-2016 RB9646 587a1d8d5abbd04dd635b2d8af31c0c0 637 SUPERFAMILY SSF56954 251 580 1.02E-41 T 11-11-2016 RB9646 587a1d8d5abbd04dd635b2d8af31c0c0 637 SUPERFAMILY SSF56954 95 155 1.02E-41 T 11-11-2016 RB12015 1a8742440dbae0fa023793a0c08a60ac 321 SUPERFAMILY SSF53448 10 219 8.81E-10 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB12015 1a8742440dbae0fa023793a0c08a60ac 321 Gene3D G3DSA:3.90.550.10 12 178 5.6E-6 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB870 86dc88121ab5fe1214ea6e4205a28b79 428 Pfam PF13633 Prokaryotic N-terminal methylation site 28 53 8.6E-8 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB870 86dc88121ab5fe1214ea6e4205a28b79 428 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 28 48 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB870 86dc88121ab5fe1214ea6e4205a28b79 428 Gene3D G3DSA:3.30.700.10 30 95 7.4E-8 T 11-11-2016 RB870 86dc88121ab5fe1214ea6e4205a28b79 428 SUPERFAMILY SSF54523 30 193 7.38E-31 T 11-11-2016 RB870 86dc88121ab5fe1214ea6e4205a28b79 428 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 28 49 2.2E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB870 86dc88121ab5fe1214ea6e4205a28b79 428 Pfam PF07596 Protein of unknown function (DUF1559) 54 393 7.2E-61 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5660 d41fae4f10f4e42a6b0f4b609cb1973a 428 Pfam PF07596 Protein of unknown function (DUF1559) 56 380 2.1E-60 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB5660 d41fae4f10f4e42a6b0f4b609cb1973a 428 Pfam PF13633 Prokaryotic N-terminal methylation site 32 55 8.6E-6 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5660 d41fae4f10f4e42a6b0f4b609cb1973a 428 Gene3D G3DSA:3.30.700.10 32 81 4.1E-7 T 11-11-2016 RB5660 d41fae4f10f4e42a6b0f4b609cb1973a 428 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 31 52 2.9E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB5660 d41fae4f10f4e42a6b0f4b609cb1973a 428 SUPERFAMILY SSF54523 32 179 2.43E-25 T 11-11-2016 RB4667 cc020de5ca6c68f3f3eea44b95295e30 451 Gene3D G3DSA:2.140.10.10 9 450 9.2E-52 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB4667 cc020de5ca6c68f3f3eea44b95295e30 451 SUPERFAMILY SSF50998 26 86 3.01E-48 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB4667 cc020de5ca6c68f3f3eea44b95295e30 451 SUPERFAMILY SSF50998 113 445 3.01E-48 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB4667 cc020de5ca6c68f3f3eea44b95295e30 451 Pfam PF13360 PQQ-like domain 115 369 4.1E-13 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat RB5405 3684fbdac5d021fe1b7ffbf82518f9a8 205 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 15 194 9.7E-43 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RB5405 3684fbdac5d021fe1b7ffbf82518f9a8 205 SUPERFAMILY SSF100950 15 198 1.95E-45 T 11-11-2016 RB5405 3684fbdac5d021fe1b7ffbf82518f9a8 205 PIRSF PIRSF006806 10 197 5.0E-37 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RB5405 3684fbdac5d021fe1b7ffbf82518f9a8 205 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 15 194 2.1E-38 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RB5405 3684fbdac5d021fe1b7ffbf82518f9a8 205 Gene3D G3DSA:3.40.50.10420 15 198 6.7E-49 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RB1487 dde9f241f8a95b1027edc089024e0216 106 Gene3D G3DSA:3.30.70.900 14 105 2.3E-30 T 11-11-2016 RB1487 dde9f241f8a95b1027edc089024e0216 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 14 86 2.6E-15 T 11-11-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RB1487 dde9f241f8a95b1027edc089024e0216 106 SUPERFAMILY SSF54909 13 102 2.75E-28 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB218 e6d9e6cc7e63ce4dd38cf5276817d657 470 Pfam PF07394 Protein of unknown function (DUF1501) 49 466 2.0E-154 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB218 e6d9e6cc7e63ce4dd38cf5276817d657 470 Gene3D G3DSA:3.40.720.10 339 451 2.1E-4 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB218 e6d9e6cc7e63ce4dd38cf5276817d657 470 SUPERFAMILY SSF53649 301 451 2.24E-17 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7212 f867dce1a26a8a08324fc38b3e6ddb5e 422 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 420 8.2E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7212 f867dce1a26a8a08324fc38b3e6ddb5e 422 Gene3D G3DSA:1.10.3720.10 264 420 8.6E-45 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7212 f867dce1a26a8a08324fc38b3e6ddb5e 422 Gene3D G3DSA:1.10.3720.10 41 168 8.6E-45 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7212 f867dce1a26a8a08324fc38b3e6ddb5e 422 SUPERFAMILY SSF161098 271 405 4.5E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB7212 f867dce1a26a8a08324fc38b3e6ddb5e 422 SUPERFAMILY SSF161098 89 164 4.5E-28 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RB8838 5d1acf758ff27588c0dbd4ce1b137643 355 Gene3D G3DSA:3.40.720.10 37 286 3.5E-35 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB8838 5d1acf758ff27588c0dbd4ce1b137643 355 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 56 272 1.1E-18 T 11-11-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 RB8838 5d1acf758ff27588c0dbd4ce1b137643 355 SUPERFAMILY SSF53649 54 332 1.7E-32 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7742 ab44cb6b4df834459ebcad16fd76fd70 138 Gene3D G3DSA:3.30.40.10 40 110 5.2E-4 T 11-11-2016 IPR013083 Zinc finger, RING/FYVE/PHD-type RB7760 dba3117e4b9c09de738e4e203fe6bb63 470 Gene3D G3DSA:3.40.720.10 344 454 6.7E-4 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB7760 dba3117e4b9c09de738e4e203fe6bb63 470 SUPERFAMILY SSF53649 294 454 1.24E-20 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB7760 dba3117e4b9c09de738e4e203fe6bb63 470 Pfam PF07394 Protein of unknown function (DUF1501) 63 468 1.2E-141 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB9261 2d56146f9353cfcfe25bd9d442a64093 412 SUPERFAMILY SSF56801 78 374 1.72E-14 T 11-11-2016 RB4229 91d2f287b95ccf5f851777a1d77c9afa 419 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 27 415 7.6E-161 T 11-11-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 RB4229 91d2f287b95ccf5f851777a1d77c9afa 419 SUPERFAMILY SSF109854 24 159 6.87E-7 T 11-11-2016 RB4229 91d2f287b95ccf5f851777a1d77c9afa 419 SUPERFAMILY SSF56436 211 418 1.01E-58 T 11-11-2016 IPR016187 C-type lectin fold RB4229 91d2f287b95ccf5f851777a1d77c9afa 419 Gene3D G3DSA:3.90.1580.10 208 334 5.8E-32 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB4229 91d2f287b95ccf5f851777a1d77c9afa 419 Gene3D G3DSA:3.90.1580.10 340 418 1.6E-15 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB4229 91d2f287b95ccf5f851777a1d77c9afa 419 Pfam PF12867 DinB superfamily 30 163 2.2E-12 T 11-11-2016 IPR024775 DinB-like domain RB4229 91d2f287b95ccf5f851777a1d77c9afa 419 Pfam PF03781 Sulfatase-modifying factor enzyme 1 340 415 1.5E-4 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB4229 91d2f287b95ccf5f851777a1d77c9afa 419 Pfam PF03781 Sulfatase-modifying factor enzyme 1 220 336 4.1E-19 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 RB5758 d936369d958d5be17b0355859221798a 300 Pfam PF03741 Integral membrane protein TerC family 43 262 8.7E-54 T 11-11-2016 IPR005496 Integral membrane protein TerC GO:0016021 RB10326 f0b1609a9c561728abd65df46c6d860e 588 Pfam PF00916 Sulfate permease family 51 449 9.6E-59 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RB9169 5e0d61810f1501b8ec8ac2a48527c391 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 378 5.4E-142 T 11-11-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 RB9169 5e0d61810f1501b8ec8ac2a48527c391 380 SUPERFAMILY SSF53756 4 378 2.72E-122 T 11-11-2016 RB9169 5e0d61810f1501b8ec8ac2a48527c391 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 375 1.6E-114 T 11-11-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RB9169 5e0d61810f1501b8ec8ac2a48527c391 380 Gene3D G3DSA:3.40.50.2000 216 377 2.9E-60 T 11-11-2016 RB9169 5e0d61810f1501b8ec8ac2a48527c391 380 Gene3D G3DSA:3.40.50.2000 1 215 6.0E-74 T 11-11-2016 RB9679 927dc9d9eab1a68989eb5ee7b4eb5966 512 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 20 475 4.7E-75 T 11-11-2016 IPR010263 Type VI secretion protein, VC_A0114 RB9679 927dc9d9eab1a68989eb5ee7b4eb5966 512 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 32 475 1.2E-66 T 11-11-2016 IPR010263 Type VI secretion protein, VC_A0114 RB3768 e18913c6621689dbe7708ce91a9b4454 437 SUPERFAMILY SSF103473 5 419 1.01E-78 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB3768 e18913c6621689dbe7708ce91a9b4454 437 Gene3D G3DSA:1.20.1250.20 8 200 8.4E-45 T 11-11-2016 RB3768 e18913c6621689dbe7708ce91a9b4454 437 Pfam PF07690 Major Facilitator Superfamily 16 380 6.4E-54 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RB3768 e18913c6621689dbe7708ce91a9b4454 437 Gene3D G3DSA:1.20.1250.20 228 421 5.7E-24 T 11-11-2016 RB7072 4c1379ec6ee343e66cb1fcd61a725aa3 257 Pfam PF03099 Biotin/lipoate A/B protein ligase family 70 177 6.2E-6 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RB7072 4c1379ec6ee343e66cb1fcd61a725aa3 257 Gene3D G3DSA:3.90.1550.10 19 254 4.5E-44 T 11-11-2016 RB7072 4c1379ec6ee343e66cb1fcd61a725aa3 257 SUPERFAMILY SSF55681 19 256 2.07E-42 T 11-11-2016 RB2553 bd25358a1043c9c0da2ec8765f6cd51a 465 Pfam PF06245 Protein of unknown function (DUF1015) 20 461 2.2E-116 T 11-11-2016 IPR008323 Uncharacterised conserved protein UCP033563 RB2553 bd25358a1043c9c0da2ec8765f6cd51a 465 PIRSF PIRSF033563 17 465 1.4E-143 T 11-11-2016 IPR008323 Uncharacterised conserved protein UCP033563 RB1599 c7e63b0de9a8ac5f79eb790b8ad119f4 298 SUPERFAMILY SSF52499 50 110 3.63E-17 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB1599 c7e63b0de9a8ac5f79eb790b8ad119f4 298 SUPERFAMILY SSF52499 161 287 3.63E-17 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB1599 c7e63b0de9a8ac5f79eb790b8ad119f4 298 Pfam PF00857 Isochorismatase family 55 250 6.4E-8 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB1599 c7e63b0de9a8ac5f79eb790b8ad119f4 298 Gene3D G3DSA:3.40.50.850 145 146 2.9E-10 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB1599 c7e63b0de9a8ac5f79eb790b8ad119f4 298 Gene3D G3DSA:3.40.50.850 181 287 2.9E-10 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB1599 c7e63b0de9a8ac5f79eb790b8ad119f4 298 Gene3D G3DSA:3.40.50.850 45 110 2.9E-10 T 11-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RB12084 18a32b6c07b9fa33b04ed205b877912a 285 Pfam PF06439 Domain of Unknown Function (DUF1080) 63 281 3.3E-32 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB347 e12a807c5fbd97ebd8841fcb758c67b2 180 SUPERFAMILY SSF52833 77 177 2.12E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold RB347 e12a807c5fbd97ebd8841fcb758c67b2 180 Gene3D G3DSA:3.40.30.10 77 178 3.4E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold RB459 186293fa2ea7a30a6287e6f539088a99 224 Pfam PF14103 Domain of unknown function (DUF4276) 8 204 2.0E-25 T 11-11-2016 IPR025455 Protein of unknown function DUF4276 RB406 aa1466f795848e27a5cb6fa40e74f70b 557 Pfam PF00884 Sulfatase 125 448 6.9E-53 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB406 aa1466f795848e27a5cb6fa40e74f70b 557 SUPERFAMILY SSF53649 124 550 1.74E-106 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB406 aa1466f795848e27a5cb6fa40e74f70b 557 Gene3D G3DSA:3.40.720.10 123 460 2.0E-84 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB406 aa1466f795848e27a5cb6fa40e74f70b 557 Gene3D G3DSA:3.30.1120.10 473 550 3.8E-13 T 11-11-2016 RB406 aa1466f795848e27a5cb6fa40e74f70b 557 Pfam PF16347 Domain of unknown function (DUF4976) 450 550 1.9E-8 T 11-11-2016 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 RB9953 dbc7c981c0f97046585b2f6f5ff40896 540 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 29 505 2.1E-138 T 11-11-2016 IPR003846 Uncharacterised protein family UPF0061 RB9953 dbc7c981c0f97046585b2f6f5ff40896 540 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 3 522 42.071 T 11-11-2016 IPR003846 Uncharacterised protein family UPF0061 RB13278 fa352e82a9e05aed984d723bae633c3b 239 Gene3D G3DSA:3.90.820.10 6 43 3.6E-4 T 11-11-2016 RB12172 859771e7e679ffcf5efbb95fa79ad399 143 Pfam PF10135 Rod binding protein 89 135 4.0E-7 T 11-11-2016 IPR019301 Flagellar protein FlgJ, N-terminal RB3283 9b599c4e2164185daada86e05ebccfa6 149 Pfam PF03692 Putative zinc- or iron-chelating domain 25 126 2.6E-14 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein RB9620 aae13c433ff11ba1a1907ac8646f20f2 558 Pfam PF14907 Uncharacterised nucleotidyltransferase 85 314 4.2E-37 T 11-11-2016 RB7592 43ecca53ed52e4b86eb7cced3d44fbed 220 Gene3D G3DSA:2.102.10.10 136 219 1.7E-22 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB7592 43ecca53ed52e4b86eb7cced3d44fbed 220 SUPERFAMILY SSF50022 135 219 7.73E-21 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB7592 43ecca53ed52e4b86eb7cced3d44fbed 220 Pfam PF00355 Rieske [2Fe-2S] domain 138 196 5.3E-14 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RB2316 8c7fe466826aaccb2675035c54d79cc3 179 Gene3D G3DSA:1.25.40.10 24 68 4.9E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB8209 d7ee84467e7da6440ea417003874fcff 265 Pfam PF02517 CAAX protease self-immunity 103 239 5.9E-21 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 RB10878 f31a579c120785f4f10430182cd6d42b 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 72 5.2E-16 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RB10878 f31a579c120785f4f10430182cd6d42b 244 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8 182 2.6E-39 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 RB10878 f31a579c120785f4f10430182cd6d42b 244 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RB12533 f4efb752c1c48d3124cdfbbf51740af5 431 Pfam PF07586 Protein of unknown function (DUF1552) 54 338 3.9E-75 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB11516 56c7868b6c8d9d3d7524064f522f40d5 207 SUPERFAMILY SSF109604 7 202 3.53E-61 T 11-11-2016 RB11516 56c7868b6c8d9d3d7524064f522f40d5 207 SMART SM00471 25 139 1.9E-10 T 11-11-2016 IPR003607 HD/PDEase domain RB11516 56c7868b6c8d9d3d7524064f522f40d5 207 Gene3D G3DSA:1.10.3210.10 7 202 4.1E-46 T 11-11-2016 IPR006674 HD domain RB11516 56c7868b6c8d9d3d7524064f522f40d5 207 Pfam PF01966 HD domain 31 129 1.5E-14 T 11-11-2016 IPR006674 HD domain RB5304 3286b94139ee5cbfa6b6e459997409dd 379 Pfam PF04366 Las17-binding protein actin regulator 139 236 2.1E-25 T 11-11-2016 IPR007461 Ysc84 actin-binding domain RB962 38e693a1fdfb55b671c7aa71a19f1786 99 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 3 73 1.3E-9 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RB988 b75ff0b5b6d6cdc34e1cb8e633c7c691 376 Pfam PF14080 Domain of unknown function (DUF4261) 282 358 2.1E-18 T 11-11-2016 IPR025357 Domain of unknown function DUF4261 RB11107 2fb1830751765b74ef165d0373efcdf3 225 Pfam PF13628 Domain of unknown function (DUF4142) 67 213 1.9E-19 T 11-11-2016 IPR025419 Domain of unknown function DUF4142 RB4325 67164ac5b5984dba08b1610e6a917494 48 Pfam PF07644 Planctomycete PGAMP 14 48 7.1E-23 T 11-11-2016 IPR011503 Planctomycete PGAMP RB11397 dd40651ca5dfd639fe81761aa84dac26 207 Pfam PF04832 SOUL heme-binding protein 36 204 4.9E-43 T 11-11-2016 IPR006917 SOUL haem-binding protein RB11397 dd40651ca5dfd639fe81761aa84dac26 207 SUPERFAMILY SSF55136 30 206 1.55E-43 T 11-11-2016 IPR011256 Regulatory factor, effector binding domain RB7131 76e2642694d39937214c03b65752c4f8 510 Pfam PF02470 MlaD protein 38 111 2.4E-10 T 11-11-2016 IPR003399 Mce/MlaD RB1912 e03f4075e9b282c492133ab2bac69b54 693 SUPERFAMILY SSF52317 54 245 8.47E-5 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB5575 994c4c5ff507feeb8dd452d9fd926e8c 311 SUPERFAMILY SSF53474 45 250 1.54E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5575 994c4c5ff507feeb8dd452d9fd926e8c 311 Gene3D G3DSA:3.40.50.1820 51 239 1.4E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB5374 d38c3c17a4f76c0182c9b75b40f90a47 204 SUPERFAMILY SSF48452 63 155 5.26E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB5374 d38c3c17a4f76c0182c9b75b40f90a47 204 Gene3D G3DSA:1.25.40.10 62 132 3.0E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9648 a40768dd3a7b75179ab3353e710bd099 410 SUPERFAMILY SSF53448 30 265 1.41E-36 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9648 a40768dd3a7b75179ab3353e710bd099 410 Pfam PF13641 Glycosyltransferase like family 2 43 255 8.2E-21 T 11-11-2016 RB9648 a40768dd3a7b75179ab3353e710bd099 410 Gene3D G3DSA:3.90.550.10 43 251 1.4E-25 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB6967 730d5349b1ad73a9f3d319f4675ff158 664 SUPERFAMILY SSF103473 102 186 8.37E-5 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB6967 730d5349b1ad73a9f3d319f4675ff158 664 Pfam PF01594 Domain of unknown function DUF20 108 194 4.0E-10 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like RB6967 730d5349b1ad73a9f3d319f4675ff158 664 Pfam PF01594 Domain of unknown function DUF20 408 644 5.7E-36 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like RB13059 d6c008a717ed2fb4bcb3f488bbb3d074 114 Pfam PF04021 Class III signal peptide 8 34 2.8E-7 T 11-11-2016 IPR007166 Class III signal peptide motif RB11929 02c88b25a18b2d6d3fefc34dd3bdeac4 293 PRINTS PR00164 ABC-2 type transport system membrane protein signature 186 205 1.3E-8 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RB11929 02c88b25a18b2d6d3fefc34dd3bdeac4 293 PRINTS PR00164 ABC-2 type transport system membrane protein signature 115 140 1.3E-8 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RB11929 02c88b25a18b2d6d3fefc34dd3bdeac4 293 PRINTS PR00164 ABC-2 type transport system membrane protein signature 149 173 1.3E-8 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RB11929 02c88b25a18b2d6d3fefc34dd3bdeac4 293 PRINTS PR00164 ABC-2 type transport system membrane protein signature 68 90 1.3E-8 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RB11929 02c88b25a18b2d6d3fefc34dd3bdeac4 293 Pfam PF01061 ABC-2 type transporter 21 203 2.5E-22 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 RB4114 c9723a9a5b4b9a1384277d6072bf1a66 93 Pfam PF07621 Protein of unknown function (DUF1582) 52 80 1.7E-12 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB3052 6f8a987c49fe8df8e09f59cc5bf4bb25 35 Pfam PF07623 Protein of unknown function (DUF1584) 4 30 2.2E-18 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB3698 d77bfb2f46d3f846f3d48fdd6786dc97 87 Gene3D G3DSA:3.20.20.70 1 85 1.5E-27 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB3698 d77bfb2f46d3f846f3d48fdd6786dc97 87 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 85 6.2E-20 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RB3698 d77bfb2f46d3f846f3d48fdd6786dc97 87 SUPERFAMILY SSF51395 1 85 1.01E-25 T 11-11-2016 RB8941 0c603245cb4f080bb67ea40f804587ff 555 Gene3D G3DSA:3.40.309.10 289 480 3.8E-42 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RB8941 0c603245cb4f080bb67ea40f804587ff 555 Pfam PF00171 Aldehyde dehydrogenase family 41 451 1.1E-45 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RB8941 0c603245cb4f080bb67ea40f804587ff 555 Gene3D G3DSA:3.40.605.10 30 287 7.2E-42 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RB8941 0c603245cb4f080bb67ea40f804587ff 555 SUPERFAMILY SSF53720 48 504 3.93E-74 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RB13099 466881810376d9d4b4f4f1b5d487be40 143 Pfam PF01475 Ferric uptake regulator family 18 124 1.4E-12 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RB13099 466881810376d9d4b4f4f1b5d487be40 143 SUPERFAMILY SSF46785 10 141 4.71E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB13099 466881810376d9d4b4f4f1b5d487be40 143 Gene3D G3DSA:1.10.10.10 9 86 5.5E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RB383 a9c17a13e493f8b49c3c52acbcd1b903 224 SUPERFAMILY SSF53335 77 199 1.8E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB383 a9c17a13e493f8b49c3c52acbcd1b903 224 Gene3D G3DSA:3.40.50.150 77 187 1.5E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6357 83e3f1ae9692e5cac08bdad62eb8a882 273 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 217 8.9E-40 T 11-11-2016 RB5613 c0abeb215d66774d9c44372d2970b89f 360 Pfam PF06224 Winged helix DNA-binding domain 26 347 1.3E-41 T 11-11-2016 IPR009351 Protein of unknown function DUF1006 RB2784 eb787f8acbecef73f996078616540e69 203 Pfam PF01957 NfeD-like C-terminal, partner-binding 10 162 4.2E-14 T 11-11-2016 IPR002810 NfeD-like, C-terminal domain RB1432 2290dc02ce3889471513cd4f42854bac 199 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 17 158 2.8E-23 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RB11701 ffd926b7f67ba9b6ea60f0e7f22d081f 901 Gene3D G3DSA:1.25.40.10 475 716 3.4E-21 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11701 ffd926b7f67ba9b6ea60f0e7f22d081f 901 Gene3D G3DSA:1.25.40.10 779 852 3.4E-21 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11701 ffd926b7f67ba9b6ea60f0e7f22d081f 901 SUPERFAMILY SSF48452 473 495 2.17E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11701 ffd926b7f67ba9b6ea60f0e7f22d081f 901 SUPERFAMILY SSF48452 788 840 2.17E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11701 ffd926b7f67ba9b6ea60f0e7f22d081f 901 SUPERFAMILY SSF48452 676 712 2.17E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB11701 ffd926b7f67ba9b6ea60f0e7f22d081f 901 SUPERFAMILY SSF48452 530 619 2.17E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2059 518284a0f866ce64316131c47cbadaa1 407 SUPERFAMILY SSF51735 103 405 1.4E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain RB2059 518284a0f866ce64316131c47cbadaa1 407 Gene3D G3DSA:3.40.50.720 109 346 1.3E-17 T 11-11-2016 IPR016040 NAD(P)-binding domain RB12348 6c0329d00996de71ef458ce126076004 260 Pfam PF04186 FxsA cytoplasmic membrane protein 89 195 4.3E-31 T 11-11-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 RB7822 42b6c2ecea8c3ecde295ff8c6a2e3f0a 182 Pfam PF10816 Domain of unknown function (DUF2760) 59 180 9.3E-37 T 11-11-2016 IPR021212 Domain of unknown function DUF2760 RB9892 0b37693d811bfeeb2bbeb046cf15c39c 491 PIRSF PIRSF006446 1 477 1.3E-160 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RB9892 0b37693d811bfeeb2bbeb046cf15c39c 491 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 452 2.6E-161 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 RB6956 f981a5e52f9cbd9d1fe12da8821aade5 485 Gene3D G3DSA:3.30.1120.10 392 468 7.9E-16 T 11-11-2016 RB6956 f981a5e52f9cbd9d1fe12da8821aade5 485 SUPERFAMILY SSF53649 46 466 1.08E-129 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6956 f981a5e52f9cbd9d1fe12da8821aade5 485 ProSitePatterns PS00149 Sulfatases signature 2. 140 150 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB6956 f981a5e52f9cbd9d1fe12da8821aade5 485 Pfam PF00884 Sulfatase 47 353 3.4E-79 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RB6956 f981a5e52f9cbd9d1fe12da8821aade5 485 ProSitePatterns PS00523 Sulfatases signature 1. 92 104 - T 11-11-2016 IPR024607 Sulfatase, conserved site RB6956 f981a5e52f9cbd9d1fe12da8821aade5 485 Gene3D G3DSA:3.40.720.10 46 391 4.8E-114 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB10137 93e654a6b4e7e52ada9cf98b8221a7a2 73 Pfam PF07629 Protein of unknown function (DUF1590) 38 69 3.9E-23 T 11-11-2016 IPR011481 Protein of unknown function DUF1590 RB9867 e8116b922cde754bf903a1dd402f04b3 209 Pfam PF14063 Protein of unknown function (DUF4254) 46 189 3.9E-54 T 11-11-2016 IPR025350 Protein of unknown function DUF4254 RB11356 62e635af05cece460448da67d2bc6378 237 SUPERFAMILY SSF53448 7 217 3.75E-21 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11356 62e635af05cece460448da67d2bc6378 237 Gene3D G3DSA:3.90.550.10 61 205 5.0E-12 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11356 62e635af05cece460448da67d2bc6378 237 Pfam PF00535 Glycosyl transferase family 2 38 170 1.9E-7 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB9522 59a2a0bde510beae82468576f4010e38 137 Pfam PF11742 Protein of unknown function (DUF3302) 37 102 6.3E-17 T 11-11-2016 IPR011223 Uncharacterised conserved protein UCP028770 RB7871 dc1f37fa4b5173c23fac72ad78b0739a 522 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 69 327 1.7E-8 T 11-11-2016 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 RB8011 d89044fb4459dfa7897976a350ef6c8c 394 Pfam PF07608 Protein of unknown function (DUF1571) 152 367 1.6E-77 T 11-11-2016 IPR011465 Protein of unknown function DUF1571 RB8561 ee62f912bfb72ba75fe86d64fd7199d0 439 Pfam PF09594 Protein of unknown function (DUF2029) 91 336 1.6E-10 T 11-11-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RB2881 62404273d97acb58be77223a9f0313cc 359 Pfam PF02535 ZIP Zinc transporter 204 354 8.4E-20 T 11-11-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RB8797 56f9fc9534b41ebb2d04dbd86bedd8a9 542 Pfam PF00474 Sodium:solute symporter family 40 293 1.9E-27 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB8797 56f9fc9534b41ebb2d04dbd86bedd8a9 542 Pfam PF00474 Sodium:solute symporter family 347 478 4.2E-16 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB8797 56f9fc9534b41ebb2d04dbd86bedd8a9 542 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 478 1.7E-65 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB4738 c3f5611a34b64a00bbd6f9e7773bae98 337 SUPERFAMILY SSF51395 5 296 1.34E-41 T 11-11-2016 RB4738 c3f5611a34b64a00bbd6f9e7773bae98 337 Gene3D G3DSA:3.20.20.70 91 304 1.9E-38 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB4738 c3f5611a34b64a00bbd6f9e7773bae98 337 Gene3D G3DSA:3.20.20.70 4 56 1.9E-38 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB6969 06ec4521ead20b427b965522a225b343 449 Pfam PF07394 Protein of unknown function (DUF1501) 66 448 5.1E-107 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 RB6969 06ec4521ead20b427b965522a225b343 449 SUPERFAMILY SSF53649 307 436 2.62E-17 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RB6969 06ec4521ead20b427b965522a225b343 449 Gene3D G3DSA:3.40.720.10 317 429 3.6E-8 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RB13111 b434028caf9ffaba8cf9fa09262aa4e2 176 Pfam PF00293 NUDIX domain 24 160 3.0E-6 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RB13111 b434028caf9ffaba8cf9fa09262aa4e2 176 SUPERFAMILY SSF55811 23 170 6.53E-7 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB13111 b434028caf9ffaba8cf9fa09262aa4e2 176 Gene3D G3DSA:3.90.79.10 25 170 9.4E-7 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RB569 a3b24dda4346aa33e16247a2f7e36050 264 Pfam PF06439 Domain of Unknown Function (DUF1080) 85 256 2.7E-33 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB10877 824c205c3a69d16d224f08cd6f647693 453 Pfam PF02517 CAAX protease self-immunity 283 440 9.9E-13 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 RB12082 f1b810188c22956758238408cdf89f0e 244 Pfam PF13419 Haloacid dehalogenase-like hydrolase 102 217 2.2E-7 T 11-11-2016 IPR023214 HAD-like domain RB12082 f1b810188c22956758238408cdf89f0e 244 Gene3D G3DSA:3.40.50.1000 16 218 3.0E-27 T 11-11-2016 IPR023214 HAD-like domain RB12082 f1b810188c22956758238408cdf89f0e 244 SUPERFAMILY SSF56784 19 231 6.1E-25 T 11-11-2016 IPR023214 HAD-like domain RB11652 80adf97ca3ed8aad4739949bc79f8134 303 SUPERFAMILY SSF50998 100 281 2.82E-8 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RB11652 80adf97ca3ed8aad4739949bc79f8134 303 Gene3D G3DSA:2.140.10.10 107 192 8.5E-4 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RB11720 df4d447cc50fc6556312e104151e457d 264 SUPERFAMILY SSF55797 164 263 1.08E-9 T 11-11-2016 IPR014044 CAP domain RB1478 6f54676aad4b7e6077bfd11ec1ac613a 666 SUPERFAMILY SSF53300 176 319 1.11E-6 T 11-11-2016 IPR002035 von Willebrand factor, type A RB5213 016e9991a877b2721d38276c2a9a0233 228 Pfam PF09844 Uncharacterized conserved protein (COG2071) 6 218 9.5E-55 T 11-11-2016 IPR018644 Protein of unknown function DUF2071 RB1533 f53fb3f8c6e680150f703816d7582afb 400 Pfam PF14486 Domain of unknown function (DUF4432) 56 359 4.1E-100 T 11-11-2016 IPR027839 Protein of unknown function DUF4432 RB9500 8ed4d3157b1ffb31d56edd9f90051c05 321 Pfam PF01882 Protein of unknown function DUF58 58 142 1.3E-22 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB6538 9adcb401c626553f67ec5abeb85accd3 587 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 71 497 3.0E-80 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB6538 9adcb401c626553f67ec5abeb85accd3 587 Pfam PF00474 Sodium:solute symporter family 71 497 6.9E-51 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RB2391 a6d721c75a3d2af9a62bd97593b76e25 181 SUPERFAMILY SSF52091 64 178 1.02E-23 T 11-11-2016 IPR002645 STAS domain RB2391 a6d721c75a3d2af9a62bd97593b76e25 181 Gene3D G3DSA:3.40.50.10600 66 179 1.4E-29 T 11-11-2016 IPR021866 SpoIIAA-like RB2391 a6d721c75a3d2af9a62bd97593b76e25 181 Pfam PF11964 SpoIIAA-like 74 179 3.1E-12 T 11-11-2016 IPR021866 SpoIIAA-like RB6160 470274e8d23e14b0a4e5af5dbed533fe 52 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 46 1.4E-4 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RB9874 e3978c6da31552c0082d2d4ec618c8f5 267 Pfam PF02616 Segregation and condensation protein ScpA 20 228 9.3E-23 T 11-11-2016 IPR003768 Segregation and condensation protein A RB12501 cfce46fb05e0d069a9b498d5463d5056 290 Pfam PF02108 Flagellar assembly protein FliH 202 285 2.3E-6 T 11-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE RB5241 5c1c5a6de80f1d279849094fc062b200 219 SUPERFAMILY SSF140990 50 212 3.79E-11 T 11-11-2016 RB27 a8a9df8d4377dabf381ad8e178b4382c 167 Pfam PF07617 Protein of unknown function (DUF1579) 7 165 2.5E-38 T 11-11-2016 IPR011473 Protein of unknown function DUF1579 RB8091 c886a58aa50cbaed97a3c531e7f1afe9 740 Pfam PF07596 Protein of unknown function (DUF1559) 142 212 1.9E-14 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB8091 c886a58aa50cbaed97a3c531e7f1afe9 740 Pfam PF07596 Protein of unknown function (DUF1559) 223 353 3.0E-17 T 11-11-2016 IPR011453 Protein of unknown function DUF1559 RB1946 4d2db2c4db26c69265edfc5ee9d8d175 411 Gene3D G3DSA:1.25.40.10 192 261 3.6E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB1946 4d2db2c4db26c69265edfc5ee9d8d175 411 SUPERFAMILY SSF48452 185 261 6.92E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB2053 f07d4e718d223a76360d83244254cc0f 153 Pfam PF07811 TadE-like protein 32 74 8.2E-8 T 11-11-2016 IPR012495 TadE-like RB11000 fe354124334b415bf51387855f78788d 224 Pfam PF16316 Domain of unknown function (DUF4956) 34 119 2.4E-9 T 11-11-2016 IPR032531 Protein of unknown function DUF4956 RB3906 f8294a71d087ba25a7b07597c5de2716 128 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 10 124 1.1E-55 T 11-11-2016 IPR018714 Protein of unknown function DUF2237 RB6282 f5fa32cdd79ba70604798c13cd2c4461 200 Pfam PF10722 Putative bacterial sensory transduction regulator 57 182 1.7E-14 T 11-11-2016 IPR019660 Putative sensory transduction regulator YbjN RB82 0e9005e56390f15dfc9befbf7737b4be 213 Pfam PF01841 Transglutaminase-like superfamily 55 151 3.9E-13 T 11-11-2016 IPR002931 Transglutaminase-like RB82 0e9005e56390f15dfc9befbf7737b4be 213 SUPERFAMILY SSF54001 53 181 6.45E-19 T 11-11-2016 RB4632 f67193e507a531b29d43b34d2a0241e8 139 SMART SM01323 43 126 2.2E-24 T 11-11-2016 IPR003849 Preprotein translocase YajC RB4632 f67193e507a531b29d43b34d2a0241e8 139 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 45 125 1.8E-16 T 11-11-2016 IPR003849 Preprotein translocase YajC RB4632 f67193e507a531b29d43b34d2a0241e8 139 Pfam PF02699 Preprotein translocase subunit 46 123 4.2E-21 T 11-11-2016 IPR003849 Preprotein translocase YajC RB7800 26a9ce6b6d31d498d9f9afedb0401bcd 133 Pfam PF13366 PD-(D/E)XK nuclease superfamily 8 121 6.1E-38 T 11-11-2016 IPR026350 GxxExxY protein RB7800 26a9ce6b6d31d498d9f9afedb0401bcd 133 TIGRFAM TIGR04256 GxxExxY: GxxExxY protein 9 123 1.7E-37 T 11-11-2016 IPR026350 GxxExxY protein RB1728 13849384ed2de6179cf06fa0d4e18b99 285 Pfam PF06724 Domain of Unknown Function (DUF1206) 32 99 2.9E-20 T 11-11-2016 IPR009597 Domain of unknown function DUF1206 RB1728 13849384ed2de6179cf06fa0d4e18b99 285 Pfam PF06724 Domain of Unknown Function (DUF1206) 115 183 3.0E-11 T 11-11-2016 IPR009597 Domain of unknown function DUF1206 RB1728 13849384ed2de6179cf06fa0d4e18b99 285 Pfam PF06724 Domain of Unknown Function (DUF1206) 209 279 2.9E-13 T 11-11-2016 IPR009597 Domain of unknown function DUF1206 RB1156 450e9544330576eb13f36ed528e94cf2 599 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 28 73 6.0E-6 T 11-11-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal RB11812 32a0ec3b2161fde470f6eba740e2ab0d 138 Pfam PF07621 Protein of unknown function (DUF1582) 43 71 1.2E-15 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB7554 b5c5405f284b3e1a4e5600b6ce0639fc 145 Pfam PF07811 TadE-like protein 24 66 1.9E-12 T 11-11-2016 IPR012495 TadE-like RB1908 8f6489cb2ed01b3e7dc7d7dc1a8004bd 207 Pfam PF11845 Protein of unknown function (DUF3365) 49 205 6.7E-15 T 11-11-2016 IPR021796 Protein of unknown function DUF3365 RB8089 881b9131c35cb25bf6f4daf5b0e42a10 255 Pfam PF07589 PEP-CTERM motif 222 246 6.2E-5 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB9501 d7bb56fbf6117cc480da40a1aaef5686 169 Pfam PF14316 Domain of unknown function (DUF4381) 11 148 1.2E-33 T 11-11-2016 IPR025489 Protein of unknown function (DUF4381 RB11851 40dc39b48d2d148a1f2de46b4d8e3a44 346 Pfam PF00482 Type II secretion system (T2SS), protein F 14 134 7.5E-20 T 11-11-2016 IPR018076 Type II secretion system F domain RB11851 40dc39b48d2d148a1f2de46b4d8e3a44 346 Pfam PF00482 Type II secretion system (T2SS), protein F 215 329 1.2E-11 T 11-11-2016 IPR018076 Type II secretion system F domain RB4317 f4c83b02dd683d5f0881c5448adae9c0 127 Gene3D G3DSA:3.30.70.100 55 111 7.3E-7 T 11-11-2016 RB4317 f4c83b02dd683d5f0881c5448adae9c0 127 SUPERFAMILY SSF55008 46 111 7.33E-7 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RB4317 f4c83b02dd683d5f0881c5448adae9c0 127 Pfam PF00403 Heavy-metal-associated domain 52 109 2.0E-5 T 11-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RB6409 eb6b05b654849d679d5018f74c9f2c51 362 Pfam PF12006 Protein of unknown function (DUF3500) 41 356 6.0E-92 T 11-11-2016 IPR021889 Protein of unknown function DUF3500 RB1474 d7818912af8874010e102f2af2625f63 56 Pfam PF07629 Protein of unknown function (DUF1590) 1 32 3.2E-24 T 11-11-2016 IPR011481 Protein of unknown function DUF1590 RB6040 c89fce6fa886f5485d6a308444e9f8c0 313 Pfam PF01595 Domain of unknown function DUF21 8 183 2.9E-30 T 11-11-2016 IPR002550 Domain of unknown function DUF21 RB2656 5d5bd823bacc279f5d488707ace442bd 359 SUPERFAMILY SSF110296 42 329 3.14E-37 T 11-11-2016 RB2656 5d5bd823bacc279f5d488707ace442bd 359 Pfam PF14870 Photosynthesis system II assembly factor YCF48 31 123 2.9E-7 T 11-11-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain RB2656 5d5bd823bacc279f5d488707ace442bd 359 Gene3D G3DSA:2.130.10.140 41 333 4.4E-28 T 11-11-2016 RB9237 33838a75a618c09b35ee80a8257fe640 277 SUPERFAMILY SSF53448 4 129 4.97E-36 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9237 33838a75a618c09b35ee80a8257fe640 277 SUPERFAMILY SSF53448 180 263 4.97E-36 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB9237 33838a75a618c09b35ee80a8257fe640 277 Pfam PF00535 Glycosyl transferase family 2 10 116 5.2E-18 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RB9237 33838a75a618c09b35ee80a8257fe640 277 Gene3D G3DSA:3.90.550.10 7 253 1.7E-37 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB5675 986579a72ec192cdd1fb4c3f83a7fffa 259 Pfam PF02622 Uncharacterized ACR, COG1678 16 234 1.3E-34 T 11-11-2016 IPR003774 Protein of unknown function UPF0301 RB5675 986579a72ec192cdd1fb4c3f83a7fffa 259 SUPERFAMILY SSF143456 103 235 6.98E-34 T 11-11-2016 RB5675 986579a72ec192cdd1fb4c3f83a7fffa 259 SUPERFAMILY SSF143456 3 67 6.98E-34 T 11-11-2016 RB5675 986579a72ec192cdd1fb4c3f83a7fffa 259 Gene3D G3DSA:3.40.1740.10 1 44 2.1E-28 T 11-11-2016 RB5675 986579a72ec192cdd1fb4c3f83a7fffa 259 Gene3D G3DSA:3.40.1740.10 192 237 2.1E-28 T 11-11-2016 RB3155 c43ff8c8275fd76f3b2c781e477eabb5 93 Pfam PF07623 Protein of unknown function (DUF1584) 2 28 4.0E-16 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB3342 370aec1f4ec23afd2955dcb5dab8e00e 270 Pfam PF02585 GlcNAc-PI de-N-acetylase 14 134 7.9E-27 T 11-11-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RB3342 370aec1f4ec23afd2955dcb5dab8e00e 270 Gene3D G3DSA:3.40.50.10320 11 256 1.0E-52 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB3342 370aec1f4ec23afd2955dcb5dab8e00e 270 SUPERFAMILY SSF102588 13 245 6.28E-53 T 11-11-2016 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RB4273 dfcc09d6ff58888a1c16b945f5154520 518 SUPERFAMILY SSF54909 6 516 3.4E-103 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel RB4273 dfcc09d6ff58888a1c16b945f5154520 518 Pfam PF04261 Dyp-type peroxidase family 374 442 9.1E-6 T 11-11-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RB945 16289d8d744a55702f10f1d7c264b902 560 Pfam PF02652 L-lactate permease 3 557 3.3E-105 T 11-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RB5921 dad75478194a34344e51e0cd7f6289e1 831 Pfam PF07587 Protein of unknown function (DUF1553) 575 802 2.5E-41 T 11-11-2016 IPR022655 Domain of unknown function DUF1553 RB5921 dad75478194a34344e51e0cd7f6289e1 831 SUPERFAMILY SSF49373 245 317 3.06E-6 T 11-11-2016 IPR008964 Invasin/intimin cell-adhesion fragments RB5921 dad75478194a34344e51e0cd7f6289e1 831 Gene3D G3DSA:2.60.40.1080 245 316 3.1E-6 T 11-11-2016 RB5921 dad75478194a34344e51e0cd7f6289e1 831 Pfam PF07583 Protein of unknown function (DUF1549) 346 528 4.7E-46 T 11-11-2016 IPR011444 Domain of unknown function DUF1549 RB6067 961e365df1cb0ffa2704a6b89481e685 297 Pfam PF04306 Protein of unknown function (DUF456) 143 294 9.3E-26 T 11-11-2016 IPR007403 Protein of unknown function DUF456 RB13146 2f9ccb67140e0dcff9c12b9e2e0d4e9b 329 Gene3D G3DSA:2.115.10.20 188 279 3.4E-7 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB13146 2f9ccb67140e0dcff9c12b9e2e0d4e9b 329 SUPERFAMILY SSF75005 49 315 1.99E-34 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB13146 2f9ccb67140e0dcff9c12b9e2e0d4e9b 329 Pfam PF04616 Glycosyl hydrolases family 43 52 196 2.6E-15 T 11-11-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 RB13146 2f9ccb67140e0dcff9c12b9e2e0d4e9b 329 Gene3D G3DSA:2.115.10.20 49 187 2.0E-24 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB6241 43ee9da6e247cf3f000c8d7e4e4edf0d 398 Pfam PF00534 Glycosyl transferases group 1 208 365 3.3E-13 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 RB6241 43ee9da6e247cf3f000c8d7e4e4edf0d 398 Gene3D G3DSA:3.40.50.2000 200 365 2.2E-11 T 11-11-2016 RB6241 43ee9da6e247cf3f000c8d7e4e4edf0d 398 SUPERFAMILY SSF53756 71 390 2.04E-37 T 11-11-2016 RB4798 99dedbfaf5f917f4933d3ad40b851db3 279 Gene3D G3DSA:2.60.120.200 66 268 2.0E-28 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB4798 99dedbfaf5f917f4933d3ad40b851db3 279 SUPERFAMILY SSF49899 63 268 5.14E-25 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RB4798 99dedbfaf5f917f4933d3ad40b851db3 279 Pfam PF07081 Protein of unknown function (DUF1349) 131 268 9.4E-15 T 11-11-2016 IPR009784 Protein of unknown function DUF1349 RB1972 b39d36414413c991a038434781b6acaa 424 SMART SM00752 22 315 5.7E-113 T 11-11-2016 IPR011020 HTTM Reactome: R-HSA-159740 RB1972 b39d36414413c991a038434781b6acaa 424 Pfam PF05090 Vitamin K-dependent gamma-carboxylase 143 318 2.9E-8 T 11-11-2016 IPR007782 Vitamin K-dependent gamma-carboxylase GO:0008488|GO:0017187 KEGG: 00130+4.1.1.90|Reactome: R-HSA-159740 RB7709 f64d31589df811c07325835a384d2a61 134 Pfam PF07621 Protein of unknown function (DUF1582) 33 61 5.8E-15 T 11-11-2016 IPR011476 Protein of unknown function DUF1582 RB774 f4f1f531012970fe45d95a0920448441 270 Pfam PF06439 Domain of Unknown Function (DUF1080) 60 259 8.8E-36 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB5210 7970b31b676f5f0733578ce470a278dc 423 Gene3D G3DSA:1.10.238.10 25 78 7.3E-5 T 11-11-2016 IPR011992 EF-hand domain pair RB7734 16deceb298fa73c79193a917d9ce0813 614 Pfam PF07607 Protein of unknown function (DUF1570) 393 517 6.0E-52 T 11-11-2016 IPR011464 Domain of unknown function DUF1570 RB2514 320abe6f78f8aa1c19469c564bd704b7 63 Pfam PF07640 QPP 1 35 3.7E-16 T 11-11-2016 IPR011507 QPP RB4327 f0d95dca4439737dc6a1006893fc7345 646 Pfam PF01554 MatE 418 578 3.9E-12 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RB4327 f0d95dca4439737dc6a1006893fc7345 646 Pfam PF01554 MatE 188 352 7.5E-9 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RB9196 c2bae33fc7de2b74d333e77fac143997 446 Pfam PF06439 Domain of Unknown Function (DUF1080) 234 438 8.5E-33 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB9196 c2bae33fc7de2b74d333e77fac143997 446 Pfam PF06439 Domain of Unknown Function (DUF1080) 54 228 2.7E-39 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB5280 5d15ec785d6a2103cd1dc1a4ff4d7f0e 268 SUPERFAMILY SSF75005 15 246 2.43E-23 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB5280 5d15ec785d6a2103cd1dc1a4ff4d7f0e 268 Gene3D G3DSA:2.115.10.20 111 251 4.1E-7 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB5280 5d15ec785d6a2103cd1dc1a4ff4d7f0e 268 Gene3D G3DSA:2.115.10.20 17 110 3.5E-11 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RB12965 51bc868a61b34fc7efad20e6e955f546 223 Pfam PF04972 BON domain 169 223 4.4E-11 T 11-11-2016 IPR007055 BON domain RB7428 0652127dcc4132038c6a5a45e4fe50f0 128 Pfam PF04241 Protein of unknown function (DUF423) 14 108 6.1E-25 T 11-11-2016 IPR006696 Protein of unknown function DUF423 RB11626 41e1934e120185691553adac0df5d682 503 Gene3D G3DSA:3.10.450.50 456 492 1.1E-6 T 11-11-2016 IPR032710 NTF2-like domain RB11626 41e1934e120185691553adac0df5d682 503 Pfam PF02810 SEC-C motif 476 494 1.5E-8 T 11-11-2016 IPR004027 SEC-C motif RB11626 41e1934e120185691553adac0df5d682 503 SUPERFAMILY SSF103642 474 494 3.27E-6 T 11-11-2016 RB4366 0b7d610bef5680c2513a26926dd6baf6 159 Pfam PF01661 Macro domain 24 139 2.8E-23 T 11-11-2016 IPR002589 Macro domain RB4366 0b7d610bef5680c2513a26926dd6baf6 159 SUPERFAMILY SSF52949 7 145 1.01E-32 T 11-11-2016 RB4366 0b7d610bef5680c2513a26926dd6baf6 159 Gene3D G3DSA:3.40.220.10 6 143 2.4E-27 T 11-11-2016 RB4366 0b7d610bef5680c2513a26926dd6baf6 159 SMART SM00506 7 139 3.4E-20 T 11-11-2016 IPR002589 Macro domain RB1097 2bebd9c822437b2b45cdbb89b7970ff5 404 TIGRFAM TIGR04332 gamma_Glu_sys: poly-gamma-glutamate system protein 55 339 2.1E-79 T 11-11-2016 IPR027602 Poly-gamma-glutamate system protein RB10055 da796f80e30aa10c8b42d0eea191283a 460 Pfam PF04932 O-Antigen ligase 239 380 2.9E-16 T 11-11-2016 IPR007016 O-antigen ligase-related RB4699 a6b36cd9eba22d54055c3d094b6c1981 782 SUPERFAMILY SSF48208 285 743 4.42E-41 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RB4699 a6b36cd9eba22d54055c3d094b6c1981 782 Gene3D G3DSA:1.50.10.10 454 651 3.8E-7 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RB12526 a87137ce627b1e90e87c18b88f54f415 256 Pfam PF01694 Rhomboid family 90 244 8.0E-37 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB12526 a87137ce627b1e90e87c18b88f54f415 256 Gene3D G3DSA:1.20.1540.10 13 49 3.1E-43 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB12526 a87137ce627b1e90e87c18b88f54f415 256 Gene3D G3DSA:1.20.1540.10 84 241 3.1E-43 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RB12526 a87137ce627b1e90e87c18b88f54f415 256 SUPERFAMILY SSF144091 10 49 3.92E-42 T 11-11-2016 RB12526 a87137ce627b1e90e87c18b88f54f415 256 SUPERFAMILY SSF144091 85 244 3.92E-42 T 11-11-2016 RB562 530113a3ed45c48d040eb2f3ec3c8b26 157 Pfam PF07617 Protein of unknown function (DUF1579) 4 156 4.9E-51 T 11-11-2016 IPR011473 Protein of unknown function DUF1579 RB2852 6728b7435569415124f726c33637d86f 240 Pfam PF02517 CAAX protease self-immunity 142 226 1.1E-11 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 RB9469 669e4d64a39c19ffaeedfc202269aece 409 SUPERFAMILY SSF46626 72 158 8.48E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 RB9469 669e4d64a39c19ffaeedfc202269aece 409 Pfam PF07635 Planctomycete cytochrome C 82 134 1.7E-11 T 11-11-2016 IPR011429 Cytochrome C, Planctomycete RB792 18832562bdb09bd9d060f8854b7f0164 450 Pfam PF00999 Sodium/hydrogen exchanger family 46 435 1.8E-36 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RB11598 6a0ccc5f075b5c4a89d71a11f6269e31 119 SUPERFAMILY SSF54523 21 78 2.2E-5 T 11-11-2016 RB123 1351a47e7b3fda9199324e216e9e201e 430 Pfam PF00482 Type II secretion system (T2SS), protein F 300 420 6.5E-14 T 11-11-2016 IPR018076 Type II secretion system F domain RB9063 6baedcb738d23d12ca4ce6910927a6f6 452 Pfam PF07585 Putative beta barrel porin-7 (BBP7) 100 452 3.2E-129 T 11-11-2016 IPR011446 Putative beta barrel porin-7 RB5644 627a9e52651330d687bcd01d4ac05a90 254 Pfam PF06439 Domain of Unknown Function (DUF1080) 55 252 3.4E-49 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB7209 40dcd655955a75901107f3be5171f605 260 Pfam PF14099 Polysaccharide lyase 47 247 2.2E-35 T 11-11-2016 IPR025975 Polysaccharide lyase MetaCyc: PWY-7644 RB3696 6c08c64fd713b0f9d9de86e1b9a613a1 135 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 115 1.4E-27 T 11-11-2016 IPR006750 Putative inner membrane exporter, YdcZ RB1520 b3ffc99d216688a8003b0cb852a0dc1c 104 Gene3D G3DSA:3.90.550.10 25 74 9.1E-4 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB4014 bdc7f0476ea9703bbd220476108c20c4 473 Gene3D G3DSA:3.40.50.1820 220 408 1.9E-13 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4014 bdc7f0476ea9703bbd220476108c20c4 473 SUPERFAMILY SSF53474 221 398 9.61E-11 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB12928 72ca540f592f27d001697350866921e2 382 Pfam PF00144 Beta-lactamase 63 382 1.0E-66 T 11-11-2016 IPR001466 Beta-lactamase-related RB12928 72ca540f592f27d001697350866921e2 382 Gene3D G3DSA:3.40.710.10 53 382 4.6E-78 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like RB12928 72ca540f592f27d001697350866921e2 382 SUPERFAMILY SSF56601 61 382 4.14E-79 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like RB11796 a5e1ab54af8d172cbed2a21135c1ff5d 231 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 199 222 0.0023 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB12053 de201560493ac75074fbe0b75f0a3ae3 119 Pfam PF02472 Biopolymer transport protein ExbD/TolR 1 115 5.7E-25 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RB11062 2a993a301eaf9689143ff9058420c0b8 214 Pfam PF11322 Protein of unknown function (DUF3124) 72 193 8.9E-47 T 11-11-2016 IPR021471 Protein of unknown function DUF3124 RB20 28e2c7819a2d96c3dd42b0fa910e03ae 774 SUPERFAMILY SSF57997 443 621 2.18E-9 T 11-11-2016 RB626 c4c36b71f3858f363a9b3887b686c782 215 Gene3D G3DSA:1.10.238.10 65 103 8.0E-5 T 11-11-2016 IPR011992 EF-hand domain pair RB626 c4c36b71f3858f363a9b3887b686c782 215 ProSitePatterns PS00018 EF-hand calcium-binding domain. 80 92 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site RB3603 0c925f1b8d084b5b7ac13f8c8fd6822c 344 Gene3D G3DSA:2.130.10.10 73 295 2.8E-23 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RB3603 0c925f1b8d084b5b7ac13f8c8fd6822c 344 SUPERFAMILY SSF82171 48 341 1.69E-20 T 11-11-2016 RB3603 0c925f1b8d084b5b7ac13f8c8fd6822c 344 Pfam PF07676 WD40-like Beta Propeller Repeat 173 184 0.017 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB3603 0c925f1b8d084b5b7ac13f8c8fd6822c 344 Pfam PF07676 WD40-like Beta Propeller Repeat 122 152 1.4E-4 T 11-11-2016 IPR011659 WD40-like Beta Propeller RB2934 72786206ad0abeee0842acf28750451f 229 SUPERFAMILY SSF47336 3 54 5.63E-8 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB2934 72786206ad0abeee0842acf28750451f 229 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 3 40 0.002 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB2934 72786206ad0abeee0842acf28750451f 229 Gene3D G3DSA:1.10.1200.10 3 43 8.8E-10 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain RB2850 817de6555f5318a1f0e09f540e9a38c3 247 Pfam PF07589 PEP-CTERM motif 206 228 2.9E-6 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB2850 817de6555f5318a1f0e09f540e9a38c3 247 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 207 230 1.1E-5 T 11-11-2016 IPR013424 PEP-CTERM protein-sorting domain RB502 c6a7009ad11e2666c54401948e8d087d 952 Gene3D G3DSA:3.40.50.880 475 748 1.1E-48 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB502 c6a7009ad11e2666c54401948e8d087d 952 SUPERFAMILY SSF52317 483 748 4.81E-30 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB4839 7ce546148cbf89b2350f13375dc6668f 207 SUPERFAMILY SSF109854 45 203 3.89E-13 T 11-11-2016 RB4839 7ce546148cbf89b2350f13375dc6668f 207 Pfam PF07606 Protein of unknown function (DUF1569) 57 206 4.3E-56 T 11-11-2016 IPR011463 Protein of unknown function DUF1569 RB9448 47ceb56592e68b18c1432c4b51eba903 115 Pfam PF09685 Domain of unknown function (DUF4870) 10 115 4.9E-31 T 11-11-2016 IPR019109 Protein of unknown function DUF4870 RB6480 42ee70ad68971beb11eda329556c34cf 460 Gene3D G3DSA:3.30.1950.10 129 168 1.8E-7 T 11-11-2016 RB6480 42ee70ad68971beb11eda329556c34cf 460 Pfam PF02563 Polysaccharide biosynthesis/export protein 84 171 7.5E-11 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 RB6983 1cc8f0a7ec35fd535d710ed155fa1d7d 443 Pfam PF02687 FtsX-like permease family 304 436 4.0E-23 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB6983 1cc8f0a7ec35fd535d710ed155fa1d7d 443 Pfam PF12704 MacB-like periplasmic core domain 21 266 2.3E-31 T 11-11-2016 IPR025857 MacB-like periplasmic core domain RB4757 d28c03e7fb7efc52e4fc2c6a47e26b42 117 Pfam PF14357 Domain of unknown function (DUF4404) 37 117 2.7E-19 T 11-11-2016 IPR025516 Protein of unknown function DUF4404 RB3346 12b9540c0eb84fde464da13da7bccd88 567 Gene3D G3DSA:2.60.40.920 17 98 1.4E-5 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RB2895 9224259aba8e8df7df183e1506b87d36 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 136 6.3E-23 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RB2907 44c06eaf715eed20a6c2386ebf12e2ba 141 TIGRFAM TIGR04138 Plancto_Ver_chp: Verruc_Plancto-restricted protein 8 137 3.4E-48 T 11-11-2016 IPR026406 Verrucomicrobia /Planctomycetes-restricted protein RB3435 bfbeb2dcc75a47356c676dc0580e7a22 353 Pfam PF14257 Domain of unknown function (DUF4349) 67 339 1.0E-69 T 11-11-2016 IPR025645 Domain of unknown function DUF4349 RB8881 363dd74fe33410cf36078e5fa53afefa 155 SUPERFAMILY SSF49472 53 110 7.85E-5 T 11-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 RB8881 363dd74fe33410cf36078e5fa53afefa 155 Gene3D G3DSA:2.60.40.10 47 115 5.5E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold RB4182 659f2993730fc1dfd44e4ca638fb0ef4 449 Pfam PF07643 Protein of unknown function (DUF1598) 172 255 2.0E-30 T 11-11-2016 IPR011487 Protein of unknown function DUF1598 RB12022 0918999c711c924135ddd053615f017f 440 Pfam PF07586 Protein of unknown function (DUF1552) 45 343 1.5E-81 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB1316 acea1f16a90e1d20e35b01d46c25528c 184 SUPERFAMILY SSF103473 5 121 1.44E-5 T 11-11-2016 IPR020846 Major facilitator superfamily domain RB10261 4c3911b7708e7a67c1092bcd4685bdcd 81 Pfam PF02599 Global regulator protein family 1 50 1.4E-21 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB10261 4c3911b7708e7a67c1092bcd4685bdcd 81 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 46 5.0E-18 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 RB10261 4c3911b7708e7a67c1092bcd4685bdcd 81 SUPERFAMILY SSF117130 1 50 3.27E-16 T 11-11-2016 RB6627 c803ff1263cf8b600453220097b82e3a 176 Pfam PF05991 YacP-like NYN domain 13 140 5.2E-10 T 11-11-2016 IPR010298 Protein of unknown function DUF901 RB44 5ed7fce11cd8b45d7dce1805ef78a203 100 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 25 79 1.9E-6 T 11-11-2016 IPR018958 SMI1/KNR4-like domain RB9191 92aa8c52dbb1535d18d5924eb6d1e0af 45 Pfam PF07625 Protein of unknown function (DUF1586) 2 21 2.4E-13 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB12556 1121a80d624cb25f3ed098be014bce43 393 Pfam PF12006 Protein of unknown function (DUF3500) 69 381 3.1E-101 T 11-11-2016 IPR021889 Protein of unknown function DUF3500 RB34 e56f80021625d1f1c5fbeda463b3f915 263 SUPERFAMILY SSF56059 83 258 2.04E-20 T 11-11-2016 RB34 e56f80021625d1f1c5fbeda463b3f915 263 Gene3D G3DSA:3.30.470.20 153 247 4.0E-5 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RB1272 ec8c402d4c92adc38460b5079c23a426 330 Gene3D G3DSA:3.20.20.70 34 290 3.7E-9 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RB1272 ec8c402d4c92adc38460b5079c23a426 330 SUPERFAMILY SSF51569 34 322 3.87E-14 T 11-11-2016 RB5663 8b3a0113c1988909efed8a7a0e23555c 368 Pfam PF07607 Protein of unknown function (DUF1570) 208 334 6.3E-56 T 11-11-2016 IPR011464 Domain of unknown function DUF1570 RB1604 39f891f1794db503bdec931486fda9fc 399 SUPERFAMILY SSF48371 52 270 8.06E-37 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 RB1604 39f891f1794db503bdec931486fda9fc 399 Gene3D G3DSA:1.25.10.10 86 100 9.8E-4 T 11-11-2016 IPR011989 Armadillo-like helical RB1604 39f891f1794db503bdec931486fda9fc 399 Gene3D G3DSA:1.25.10.10 166 248 9.8E-4 T 11-11-2016 IPR011989 Armadillo-like helical RB40 aef8a5292dfba2242d76e13a83845a1c 153 Pfam PF14300 Domain of unknown function (DUF4375) 30 147 6.0E-18 T 11-11-2016 IPR025402 Domain of unknown function DUF4375 RB6431 4bfa36ee24fb9007213fc78b302ce308 496 Pfam PF07586 Protein of unknown function (DUF1552) 87 395 6.4E-44 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB3981 5ed25e0d6ca506983f7035abd10b7f7c 161 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 33 160 7.7E-6 T 11-11-2016 IPR018958 SMI1/KNR4-like domain RB7023 2db5c02899aaf464884f702311ed9bc2 247 Pfam PF09335 SNARE associated Golgi protein 60 182 3.8E-17 T 11-11-2016 IPR032816 SNARE associated Golgi protein RB12886 430265b46ea480cec1c0e4ebe1e1e85e 286 Pfam PF03741 Integral membrane protein TerC family 34 226 4.3E-42 T 11-11-2016 IPR005496 Integral membrane protein TerC GO:0016021 RB6923 ee58a433dcf4806ab79d73ce022c6aa1 171 Gene3D G3DSA:2.60.40.920 62 120 1.8E-4 T 11-11-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain RB4670 a9e33458d401a2d00471b1af8455b0b2 523 SUPERFAMILY SSF52047 432 507 2.75E-7 T 11-11-2016 RB4670 a9e33458d401a2d00471b1af8455b0b2 523 Gene3D G3DSA:3.80.10.10 436 511 2.9E-7 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like RB6595 a7ca79ae178fcae63173750cfaf8e505 234 Pfam PF13488 Glycine zipper 46 89 2.5E-10 T 11-11-2016 RB5942 7ab97ac7022a831b22976d8720c4e9d4 328 Pfam PF00482 Type II secretion system (T2SS), protein F 187 315 9.5E-23 T 11-11-2016 IPR018076 Type II secretion system F domain RB13068 3d78263fabd6926432b67ac72cdc4184 499 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 110 155 9.6E-7 T 11-11-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal RB1461 009aa70a47b93bc149b7ae867fc6c30d 184 Pfam PF06271 RDD family 18 143 1.5E-20 T 11-11-2016 IPR010432 RDD RB10494 8e80c58eb06027aa9bb416f863b22af2 436 Pfam PF09861 Domain of unknown function (DUF2088) 43 195 9.4E-7 T 11-11-2016 IPR018657 Domain of unknown function DUF2088 RB461 2ac9c35ea64a88a7697d3829ec4b60ee 316 Pfam PF04326 Putative DNA-binding domain 20 147 6.8E-15 T 11-11-2016 IPR007421 Schlafen, AAA domain GO:0005524 RB1758 ada0ec418693751e341c0494218936fe 340 Gene3D G3DSA:3.30.420.10 2 69 1.2E-25 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB1758 ada0ec418693751e341c0494218936fe 340 Gene3D G3DSA:3.30.420.10 141 292 1.2E-25 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB1758 ada0ec418693751e341c0494218936fe 340 SUPERFAMILY SSF53098 2 64 3.88E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB1758 ada0ec418693751e341c0494218936fe 340 SUPERFAMILY SSF53098 158 316 3.88E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB12640 5d44cda3778c4d8f0d9eba17fea004b6 559 Pfam PF03321 GH3 auxin-responsive promoter 28 544 4.9E-134 T 11-11-2016 IPR004993 GH3 family RB2012 1450a471797c754a9b099fa08a9a4b39 519 Pfam PF07585 Putative beta barrel porin-7 (BBP7) 166 519 2.0E-106 T 11-11-2016 IPR011446 Putative beta barrel porin-7 RB7382 e0a6647e0c132725e8aa15bb23c7f066 360 SUPERFAMILY SSF51658 90 352 6.02E-48 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB7382 e0a6647e0c132725e8aa15bb23c7f066 360 Pfam PF01261 Xylose isomerase-like TIM barrel 111 320 2.9E-33 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB7382 e0a6647e0c132725e8aa15bb23c7f066 360 Gene3D G3DSA:3.20.20.150 90 358 3.2E-45 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RB12439 1b19627fadb51a0b4b42e2f94609d7a9 44 Pfam PF07625 Protein of unknown function (DUF1586) 2 23 1.4E-15 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB7063 777e83f048e8a57f8687db5d448b44c5 148 Pfam PF07595 Planctomycete extracellular 45 67 2.0E-7 T 11-11-2016 IPR011506 Planctomycete extracellular RB3164 5b023a259a274d2b65d6c4d03c23ff94 1030 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 907 933 3.3E-4 T 11-11-2016 IPR001434 Domain of unknown function DUF11 RB4583 aa662a0617d52d2e17c1eaff118288cf 348 Pfam PF01148 Cytidylyltransferase family 142 342 2.6E-41 T 11-11-2016 RB7970 1154173353e2c5b7b414e66e428994b8 163 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 40 147 3.1E-25 T 11-11-2016 IPR018756 Domain of unknown function DUF2314 RB3408 3b006ab4881fd65adb40dcdd6cad6e56 180 SUPERFAMILY SSF69118 34 153 8.75E-13 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB3408 3b006ab4881fd65adb40dcdd6cad6e56 180 Gene3D G3DSA:1.20.1290.10 35 153 4.1E-8 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 RB11928 1a4f159f881becca5e0483b227388f25 410 Pfam PF10979 Protein of unknown function (DUF2786) 175 214 1.6E-9 T 11-11-2016 IPR024498 Domain of unknown function DUF2786 RB2209 4bca714aa53a8c68daa936a518b1a02c 413 Pfam PF03739 Predicted permease YjgP/YjgQ family 320 404 5.1E-7 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RB2209 4bca714aa53a8c68daa936a518b1a02c 413 Pfam PF03739 Predicted permease YjgP/YjgQ family 1 116 3.1E-13 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RB4576 d72175b15012fc89309fb565d40b6210 500 Gene3D G3DSA:3.40.50.1460 131 217 2.4E-7 T 11-11-2016 IPR029030 Caspase-like domain RB1372 e000d9b890ec8a6cf227e4a5c8e4ea0f 540 Pfam PF04932 O-Antigen ligase 268 415 1.4E-17 T 11-11-2016 IPR007016 O-antigen ligase-related RB2308 201e3b10b8413c067d278471f255523d 654 Pfam PF07585 Putative beta barrel porin-7 (BBP7) 299 654 8.3E-121 T 11-11-2016 IPR011446 Putative beta barrel porin-7 RB9651 f05c78fa6067745c1088fd90b527a270 544 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 160 428 1.1E-94 T 11-11-2016 IPR005181 Sialate O-acetylesterase domain RB9651 f05c78fa6067745c1088fd90b527a270 544 SUPERFAMILY SSF52266 307 489 3.85E-77 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB9651 f05c78fa6067745c1088fd90b527a270 544 SUPERFAMILY SSF52266 159 263 3.85E-77 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain RB5866 fbc86d87b94d4aeb59caa642f254b584 441 SUPERFAMILY SSF53098 51 237 3.19E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB5866 fbc86d87b94d4aeb59caa642f254b584 441 SUPERFAMILY SSF53098 268 415 3.19E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RB5866 fbc86d87b94d4aeb59caa642f254b584 441 Pfam PF13546 DDE superfamily endonuclease 37 307 2.5E-75 T 11-11-2016 RB7220 190f1e5f55424609fcb148443279a4df 634 Pfam PF02554 Carbon starvation protein CstA 1 358 8.2E-110 T 11-11-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 RB7220 190f1e5f55424609fcb148443279a4df 634 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 450 570 9.0E-32 T 11-11-2016 IPR025299 CstA, C-terminal domain RB9345 64b3166f2c7c23baff5d7149b4516755 94 Pfam PF07636 PSRT 7 38 2.2E-16 T 11-11-2016 IPR011504 PSRT RB8394 98227521bbc627a5ff06c8e737a34768 374 Pfam PF06067 Domain of unknown function (DUF932) 160 326 2.5E-4 T 11-11-2016 IPR026325 Protein of unknown function DUF932 RB11633 a1602906072923c1626bd06e8afc5eb6 107 Pfam PF07618 Protein of unknown function (DUF1580) 19 75 3.9E-34 T 11-11-2016 IPR011474 Protein of unknown function DUF1580 RB6658 c41f8a7cfba956f69080de19168b2b99 347 Pfam PF06283 Trehalose utilisation 98 283 5.1E-9 T 11-11-2016 IPR029010 ThuA-like domain RB6658 c41f8a7cfba956f69080de19168b2b99 347 SUPERFAMILY SSF52317 42 294 1.33E-26 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB8494 4e3757a68ee9720a788954400c056db6 457 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 76 154 3.4E-27 T 11-11-2016 IPR010627 Peptidase A24A, N-terminal RB2562 4243cd49a7ce565a1c26c0b21e275dc8 255 Pfam PF07644 Planctomycete PGAMP 28 60 7.0E-17 T 11-11-2016 IPR011503 Planctomycete PGAMP RB2562 4243cd49a7ce565a1c26c0b21e275dc8 255 Pfam PF07644 Planctomycete PGAMP 98 132 1.4E-19 T 11-11-2016 IPR011503 Planctomycete PGAMP RB1431 bec2f42c595e2dbc34b0b5c16b85bb13 492 Pfam PF00361 Proton-conducting membrane transporter 130 423 3.6E-65 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RB1431 bec2f42c595e2dbc34b0b5c16b85bb13 492 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 3.7E-10 T 11-11-2016 RB1431 bec2f42c595e2dbc34b0b5c16b85bb13 492 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 3.7E-10 T 11-11-2016 RB1431 bec2f42c595e2dbc34b0b5c16b85bb13 492 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 3.7E-10 T 11-11-2016 RB1431 bec2f42c595e2dbc34b0b5c16b85bb13 492 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 314 326 3.7E-10 T 11-11-2016 RB7100 1377311684fb892a9870285e5d2a6e38 264 Pfam PF13803 Domain of unknown function (DUF4184) 1 249 6.7E-56 T 11-11-2016 IPR025238 Protein of unknown function DUF4184 RB118 30495bde752f099e555000c7f1c9ecb0 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 26 2.0E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site RB11181 a35261ee47a9145b791034b7abfcad1f 35 Pfam PF07625 Protein of unknown function (DUF1586) 3 22 1.3E-13 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB9543 fa9e08c669ec3fdf60851897db060484 384 Pfam PF01594 Domain of unknown function DUF20 16 203 1.0E-8 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like RB9543 fa9e08c669ec3fdf60851897db060484 384 Pfam PF01594 Domain of unknown function DUF20 216 358 5.1E-38 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like RB6881 687889ce06e74d84567425c889464fc3 532 Pfam PF02687 FtsX-like permease family 392 525 3.7E-17 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RB12847 8abcce0f8c64747efbf697c5ab64696e 129 Pfam PF07628 Protein of unknown function (DUF1589) 60 110 3.4E-6 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB5359 ef2ef8d0e6e03a149942ab3b023e752b 306 Pfam PF10670 Domain of unknown function (DUF4198) 57 274 5.0E-29 T 11-11-2016 IPR019613 Protein of unknown function DUF4198 RB7559 deb05c96bf77c5c55baab78c94ed675b 140 Pfam PF07811 TadE-like protein 19 61 2.6E-15 T 11-11-2016 IPR012495 TadE-like RB10911 b4ea4fed11dc34120aabbbf6afdadd10 557 Gene3D G3DSA:2.40.160.50 394 554 1.1E-11 T 11-11-2016 RB10911 b4ea4fed11dc34120aabbbf6afdadd10 557 Pfam PF01103 Surface antigen 257 554 8.2E-46 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 RB7737 530a8de12cccc1ca236a8483e4047a37 83 Gene3D G3DSA:1.10.287.1060 7 79 6.3E-6 T 11-11-2016 RB7433 0abae3dd43ea5935fda1375499d95c2c 347 Pfam PF04018 Domain of unknown function (DUF368) 49 295 3.5E-78 T 11-11-2016 IPR007163 Protein of unknown function DUF368 RB9180 6e5a23f60de8b3593a570c4d34af2e4c 505 Gene3D G3DSA:1.25.40.10 294 399 2.6E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB4458 cdffc7e6b77ddc63cf70762e5e5d11bf 342 Pfam PF01594 Domain of unknown function DUF20 18 333 2.2E-51 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like RB8563 8826242d32fc548e07eca81044ed32dd 127 Pfam PF01152 Bacterial-like globin 8 115 2.1E-15 T 11-11-2016 IPR001486 Truncated hemoglobin GO:0019825 RB8563 8826242d32fc548e07eca81044ed32dd 127 Gene3D G3DSA:1.10.490.10 3 122 2.5E-32 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RB8563 8826242d32fc548e07eca81044ed32dd 127 SUPERFAMILY SSF46458 3 119 1.15E-29 T 11-11-2016 IPR009050 Globin-like RB4470 0633b50c7811005b9f897600cb986aed 169 TIGRFAM TIGR03067 Planc_TIGR03067: Planctomycetes uncharacterized domain TIGR03067 47 153 3.0E-16 T 11-11-2016 IPR017504 Conserved hypothetical protein CHP03067, planctomycetes RB5312 d2dcd6da6711a78aee0ef372e275f711 455 Gene3D G3DSA:2.160.20.10 15 349 3.2E-55 T 11-11-2016 IPR012334 Pectin lyase fold RB5312 d2dcd6da6711a78aee0ef372e275f711 455 SUPERFAMILY SSF51126 23 351 4.19E-64 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor RB229 e66b75db94b2f72fefaf4765f0ae0d2c 585 Pfam PF07585 Putative beta barrel porin-7 (BBP7) 247 583 1.9E-112 T 11-11-2016 IPR011446 Putative beta barrel porin-7 RB2533 0d9a0e096d3b971904d2e24d45bb542d 502 Pfam PF04087 Domain of unknown function (DUF389) 311 456 4.3E-31 T 11-11-2016 IPR005240 Protein of unknown function DUF389 RB5761 5c5f298c623659ba1c6b1a04fe4278e9 258 Pfam PF01925 Sulfite exporter TauE/SafE 18 247 7.7E-22 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RB13273 b0db2969afa746d859e9dee6191d0017 353 Pfam PF15887 Putative zinc-binding metallo-peptidase 117 186 1.7E-7 T 11-11-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase RB12265 b282f6390f2e88dea4f18c3c73dd6efe 42 Pfam PF07640 QPP 1 35 4.6E-18 T 11-11-2016 IPR011507 QPP RB3232 7e18c6434e87e6954e3cbc67662e0670 467 Pfam PF07586 Protein of unknown function (DUF1552) 70 374 2.2E-100 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB3934 0433076b1568902c369a9af14fad0933 181 Pfam PF02472 Biopolymer transport protein ExbD/TolR 29 159 1.4E-14 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RB3074 a2d149b2b7433837038ca775340781d5 53 Pfam PF07623 Protein of unknown function (DUF1584) 4 30 1.0E-18 T 11-11-2016 IPR011477 Protein of unknown function DUF1584, conserved motif RB11354 a118875d5410b9ad00f34189e3d8f1e7 341 SUPERFAMILY SSF53448 47 101 5.62E-6 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB11354 a118875d5410b9ad00f34189e3d8f1e7 341 SUPERFAMILY SSF53448 130 220 5.62E-6 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases RB13062 bca4de60019d176b8bb0144705f0ee00 141 Pfam PF01478 Type IV leader peptidase family 9 109 8.3E-11 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RB10864 3b22ffaf57ba87f786f3b34ebfd03278 314 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 85 96 - T 11-11-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 RB12030 0765789ac4d144ec3ebd834236b72a41 264 SUPERFAMILY SSF48452 149 220 7.37E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12030 0765789ac4d144ec3ebd834236b72a41 264 SUPERFAMILY SSF48452 57 97 7.37E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12030 0765789ac4d144ec3ebd834236b72a41 264 Gene3D G3DSA:1.25.40.10 52 221 6.1E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB566 180199423b1cee2a693da8a16bde5809 294 Pfam PF06055 Exopolysaccharide synthesis, ExoD 107 289 1.8E-44 T 11-11-2016 IPR010331 Exopolysaccharide synthesis, ExoD RB13097 7d23ef4ee38b13d75499b9747cd3e5d2 171 Pfam PF03203 MerC mercury resistance protein 1 156 8.5E-20 T 11-11-2016 IPR004891 MerC mercury resistance protein RB5941 b83c2212f6d59a90e3af49893390712b 347 Pfam PF00482 Type II secretion system (T2SS), protein F 180 305 4.3E-19 T 11-11-2016 IPR018076 Type II secretion system F domain RB2096 2a4f17c381a84817b99c7ef370054dc6 327 Pfam PF12006 Protein of unknown function (DUF3500) 49 319 3.2E-20 T 11-11-2016 IPR021889 Protein of unknown function DUF3500 RB4061 2fcb3af365b36574d21bda4da218489f 488 Pfam PF01478 Type IV leader peptidase family 323 410 2.8E-9 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RB4061 2fcb3af365b36574d21bda4da218489f 488 Pfam PF01478 Type IV leader peptidase family 200 241 5.5E-7 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RB13053 404fa5385f8c5bec305a1c665745ba1c 142 Pfam PF11162 Protein of unknown function (DUF2946) 15 138 3.4E-7 T 11-11-2016 IPR021333 Protein of unknown function DUF2946 RB2585 17ff7c3c2649ed11efd722b7c72e1f6b 89 Pfam PF00936 BMC domain 4 79 6.0E-24 T 11-11-2016 IPR000249 Microcompartment protein, bacteria RB2585 17ff7c3c2649ed11efd722b7c72e1f6b 89 SUPERFAMILY SSF143414 3 87 8.63E-26 T 11-11-2016 RB2585 17ff7c3c2649ed11efd722b7c72e1f6b 89 SMART SM00877 3 79 4.7E-28 T 11-11-2016 IPR000249 Microcompartment protein, bacteria RB9034 2f065c0dbca5a51d95713abbbbc863e7 1031 Gene3D G3DSA:1.25.40.10 256 305 7.6E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB9034 2f065c0dbca5a51d95713abbbbc863e7 1031 Gene3D G3DSA:1.25.40.10 859 910 7.6E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RB12936 ff8083aed96ddb962fa58aacdaefb265 580 SUPERFAMILY SSF53300 362 558 2.6E-12 T 11-11-2016 IPR002035 von Willebrand factor, type A RB3497 6ad4f08b3c9d56199f10ad59905bf6e6 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 313 2.5E-52 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RB9690 31781edfff3d11ad05378bf7ac86cfb0 500 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 22 495 5.7E-218 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RB9690 31781edfff3d11ad05378bf7ac86cfb0 500 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 71 495 4.6E-189 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RB7548 0ee43fcbc8969657ed70232d48382531 285 Gene3D G3DSA:2.60.120.620 36 259 7.4E-62 T 11-11-2016 RB7548 0ee43fcbc8969657ed70232d48382531 285 SUPERFAMILY SSF51197 37 256 7.23E-62 T 11-11-2016 RB7548 0ee43fcbc8969657ed70232d48382531 285 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 49 240 2.3E-31 T 11-11-2016 IPR008775 Phytanoyl-CoA dioxygenase RB11894 2b7c4f3a2d72c0c396abde5bbef791a5 461 Gene3D G3DSA:3.40.50.300 176 301 7.8E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB11894 2b7c4f3a2d72c0c396abde5bbef791a5 461 SUPERFAMILY SSF52540 175 301 2.48E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB7030 a083acfcc46ac86af9bf0d69c66020e9 452 Pfam PF07586 Protein of unknown function (DUF1552) 47 357 1.3E-99 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB8711 e36db476216f70dc5df2d3b3ac3a54ca 357 Pfam PF00482 Type II secretion system (T2SS), protein F 227 347 1.6E-12 T 11-11-2016 IPR018076 Type II secretion system F domain RB8711 e36db476216f70dc5df2d3b3ac3a54ca 357 Pfam PF00482 Type II secretion system (T2SS), protein F 28 153 3.7E-18 T 11-11-2016 IPR018076 Type II secretion system F domain RB1074 86f458bc2fb39cbac6afff1ed6d9ea90 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 67 340 4.8E-46 T 11-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RB3589 7742bfc793755398cbbeb31ed45cfeae 567 Pfam PF02706 Chain length determinant protein 34 214 8.2E-12 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RB360 f8422725295a41dae75e6ef64516067a 415 Pfam PF11899 Protein of unknown function (DUF3419) 11 394 2.5E-122 T 11-11-2016 IPR021829 Protein of unknown function DUF3419 RB7440 9037c1b160720cd7fff8d6c0bfb26dc4 140 SUPERFAMILY SSF55874 21 130 7.34E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB7440 9037c1b160720cd7fff8d6c0bfb26dc4 140 Gene3D G3DSA:3.30.565.10 27 99 4.2E-7 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RB8921 5408688ec7c5ca27d1adf08e26e83f7c 393 Pfam PF01757 Acyltransferase family 45 359 8.0E-18 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 RB3706 6167e51b36b193a7db082b080d3d5019 352 Pfam PF02424 ApbE family 60 324 4.4E-66 T 11-11-2016 IPR024932 Flavin transferase ApbE GO:0017013 RB3706 6167e51b36b193a7db082b080d3d5019 352 SUPERFAMILY SSF143631 49 335 2.12E-72 T 11-11-2016 IPR003374 ApbE-like domain RB7152 7ce51e62fdf7abc58d966a29cca1d21a 445 Pfam PF06439 Domain of Unknown Function (DUF1080) 260 435 6.5E-25 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB7152 7ce51e62fdf7abc58d966a29cca1d21a 445 Pfam PF06439 Domain of Unknown Function (DUF1080) 88 251 5.5E-32 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB5740 89ed0c96c39de2faba0547f29d3f22eb 375 Pfam PF00487 Fatty acid desaturase 64 335 1.8E-23 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RB3479 1dcba80768c5a737a081fe415bfb5981 1087 Pfam PF03958 Bacterial type II/III secretion system short domain 750 852 2.7E-11 T 11-11-2016 IPR005644 NolW-like RB3479 1dcba80768c5a737a081fe415bfb5981 1087 Pfam PF03958 Bacterial type II/III secretion system short domain 865 970 3.7E-13 T 11-11-2016 IPR005644 NolW-like RB10780 ebee46772c6641889533db7de17396b7 99 Pfam PF07618 Protein of unknown function (DUF1580) 11 67 9.4E-36 T 11-11-2016 IPR011474 Protein of unknown function DUF1580 RB2082 4e48d7732153e3b353715f02beef96ad 260 Gene3D G3DSA:3.40.50.1820 14 240 9.2E-23 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2082 4e48d7732153e3b353715f02beef96ad 260 SUPERFAMILY SSF53474 4 244 6.87E-32 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB2082 4e48d7732153e3b353715f02beef96ad 260 Pfam PF00975 Thioesterase domain 20 250 9.9E-31 T 11-11-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 RB6507 b670d1972f96494bfcc0c419e0dd28b0 372 SUPERFAMILY SSF53474 145 315 4.02E-8 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB6507 b670d1972f96494bfcc0c419e0dd28b0 372 Gene3D G3DSA:3.40.50.1820 199 268 1.5E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold RB4921 bacb42a6bcf567a02c1274055a334c3b 233 Pfam PF04893 Yip1 domain 37 218 1.4E-14 T 11-11-2016 IPR006977 Yip1 domain GO:0016020 RB278 a9d3078957bddc77832b48b249bb016d 916 SUPERFAMILY SSF52317 251 405 3.89E-5 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like RB9960 77d3f2bb88c06b033413423a82548d3e 332 TIGRFAM TIGR03009 plancto_dom_2: Planctomycetes uncharacterized domain TIGR03009 80 313 8.9E-96 T 11-11-2016 IPR017461 Conserved hypothetical domain CHP03009, planctomycetes RB2714 9769746a68b49f65de0db5fe874c7c0f 302 Pfam PF04402 Protein of unknown function (DUF541) 53 293 4.5E-43 T 11-11-2016 IPR007497 Protein of unknown function DUF541 RB865 6a767337d40961c4e0f717489c3457c1 542 Pfam PF12728 Helix-turn-helix domain 4 51 2.4E-7 T 11-11-2016 RB12076 c2638ac82b9213149b4f56db32910120 456 TIGRFAM TIGR03000 plancto_dom_1: Planctomycetes uncharacterized domain TIGR03000 271 345 2.5E-26 T 11-11-2016 IPR017460 Conserved hypothetical domain CHP03000, planctomycetes RB12076 c2638ac82b9213149b4f56db32910120 456 TIGRFAM TIGR03000 plancto_dom_1: Planctomycetes uncharacterized domain TIGR03000 372 446 4.2E-28 T 11-11-2016 IPR017460 Conserved hypothetical domain CHP03000, planctomycetes RB5699 24398a44921a2690f998930a06314b41 212 Pfam PF09997 Predicted membrane protein (DUF2238) 37 192 2.1E-49 T 11-11-2016 IPR014509 Uncharacterised conserved protein UCP020606 RB5699 24398a44921a2690f998930a06314b41 212 PIRSF PIRSF020606 2 212 1.5E-77 T 11-11-2016 IPR014509 Uncharacterised conserved protein UCP020606 RB6763 655c5cc4465101ef70d3ff4ce58ca8d8 358 SUPERFAMILY SSF56112 10 327 8.84E-26 T 11-11-2016 IPR011009 Protein kinase-like domain RB6763 655c5cc4465101ef70d3ff4ce58ca8d8 358 SMART SM00587 130 293 1.4E-4 T 11-11-2016 IPR015897 CHK kinase-like RB6763 655c5cc4465101ef70d3ff4ce58ca8d8 358 Pfam PF02958 Ecdysteroid kinase 214 291 4.1E-12 T 11-11-2016 IPR004119 Protein of unknown function DUF227 RB6763 655c5cc4465101ef70d3ff4ce58ca8d8 358 Pfam PF02958 Ecdysteroid kinase 98 172 2.9E-5 T 11-11-2016 IPR004119 Protein of unknown function DUF227 RB6763 655c5cc4465101ef70d3ff4ce58ca8d8 358 Gene3D G3DSA:3.90.1200.10 156 302 7.0E-14 T 11-11-2016 RB11504 5a0ce45be5c8a61530945cbd6465a6d2 72 Pfam PF12464 Maltose acetyltransferase 25 55 6.8E-6 T 11-11-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RB11408 87a1cebc2ccdcaafafeac745220e7b13 146 Pfam PF08463 EcoEI R protein C-terminal 3 139 2.0E-20 T 11-11-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 RB13042 2a49acea6fadafc15e757a355963b77c 416 Pfam PF01882 Protein of unknown function DUF58 220 313 1.6E-16 T 11-11-2016 IPR002881 Domain of unknown function DUF58 RB12460 80954a3baf90f08834a6c4fe9dfaff0a 355 Pfam PF07608 Protein of unknown function (DUF1571) 135 353 2.3E-71 T 11-11-2016 IPR011465 Protein of unknown function DUF1571 RB6572 b2c4fd1f09c9dea1662b8dc4ccb443ab 451 Pfam PF07586 Protein of unknown function (DUF1552) 38 352 2.2E-75 T 11-11-2016 IPR011447 Protein of unknown function DUF1552 RB9563 ba676c5739a51bcabf418d2c33ed2572 457 Pfam PF04773 FecR protein 144 227 3.0E-6 T 11-11-2016 IPR006860 FecR protein RB11248 0fc00eba6050646253b72d6ef750ec2b 320 Pfam PF04191 Phospholipid methyltransferase 205 302 5.1E-10 T 11-11-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 RB9702 42e4b395a5f11cc872f0513edf82219e 96 Pfam PF05488 PAAR motif 18 86 2.2E-23 T 11-11-2016 IPR008727 PAAR motif RB10570 f4a6c2131b081063b8ab4152555cd71b 244 Pfam PF10067 Predicted membrane protein (DUF2306) 79 218 1.7E-23 T 11-11-2016 IPR018750 Protein of unknown function DUF2306, membrane RB8217 c816d1a3a2e6547bdbfe1e4307c6804b 198 Pfam PF14385 Domain of unknown function (DUF4416) 9 170 7.0E-51 T 11-11-2016 IPR025529 Protein of unknown function DUF4416 RB365 0d58caa333c0192ebfe5e41dff9e1d65 545 Pfam PF13372 Alginate export 154 531 1.6E-52 T 11-11-2016 IPR025388 Alginate export domain RB19 f1d7038284690f50320aa29a8efad97e 79 Pfam PF07628 Protein of unknown function (DUF1589) 11 79 1.3E-40 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB6374 16004595e6e6ee7eedf420edb6637e8d 442 SUPERFAMILY SSF53335 36 193 2.74E-9 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6374 16004595e6e6ee7eedf420edb6637e8d 442 Gene3D G3DSA:3.40.50.150 95 177 2.0E-9 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RB6895 20a2ba5750dcbb90c26b966fb2479324 401 Pfam PF00953 Glycosyl transferase family 4 120 274 1.9E-28 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 RB11843 cf98f64eef189611deb9efb362f36467 84 Pfam PF07628 Protein of unknown function (DUF1589) 1 39 7.7E-10 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB11204 064cdcaa6f0adb2a27d014a916287b20 170 Gene3D G3DSA:3.40.50.2300 54 125 4.0E-4 T 11-11-2016 RB7205 05c192cb2b38f5909653f9c601fec466 383 Pfam PF14094 Domain of unknown function (DUF4272) 159 373 2.2E-55 T 11-11-2016 IPR025368 Protein of unknown function DUF4272 RB12189 3959cd7d680f47fdf67bac255759f8c1 164 Pfam PF04972 BON domain 114 160 4.9E-7 T 11-11-2016 IPR007055 BON domain RB3056 c04490ab297a4330921d9d4c6b453828 90 Pfam PF07597 Protein of unknown function (DUF1560) 42 90 4.6E-39 T 11-11-2016 IPR011454 Protein of unknown function DUF1560 RB12064 6c7fed60da7fc014ebb557978ee42d88 201 SUPERFAMILY SSF47226 13 119 8.24E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RB13238 140a47439bf3c0437866676ddd1bde83 164 Pfam PF07811 TadE-like protein 18 60 8.5E-15 T 11-11-2016 IPR012495 TadE-like RB6958 984e9d6a93e9ad9546fa04bd8f93308e 188 Pfam PF03703 Bacterial PH domain 61 136 9.8E-13 T 11-11-2016 IPR005182 Domain of unknown function DUF304 RB444 f2288e6e3c44a57e63e5a7b02736796b 515 SUPERFAMILY SSF52540 187 338 2.83E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB444 f2288e6e3c44a57e63e5a7b02736796b 515 SUPERFAMILY SSF52540 422 469 2.83E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RB8171 b25b2991f23a025c084beb5b0cbaa6bf 394 Pfam PF13709 Domain of unknown function (DUF4159) 168 392 9.0E-62 T 11-11-2016 IPR025297 Domain of unknown function DUF4159 RB10182 af409c122aecb52804bcf4e54326fb93 103 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 1.2E-9 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RB10700 1fd83ee183bee9f3807b9bef6f138642 235 Pfam PF01618 MotA/TolQ/ExbB proton channel family 97 192 7.0E-25 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RB9826 aa45d8bfc22ebcc3557e654b82023870 259 Pfam PF06271 RDD family 6 135 4.7E-15 T 11-11-2016 IPR010432 RDD RB1442 217c8f2be60131b1d7c3cf1130c25d98 177 Pfam PF01899 Na+/H+ ion antiporter subunit 26 169 1.2E-30 T 11-11-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 RB12342 9d6e4f45c9bc31f8958549b301620961 222 Pfam PF01618 MotA/TolQ/ExbB proton channel family 106 182 1.4E-9 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RB6799 b1afa5cd40da39f55407ee217eaf8ed5 394 Pfam PF14100 Methane oxygenase PmoA 103 384 3.7E-66 T 11-11-2016 IPR029475 Methane oxygenase PmoA RB5826 771090e035cc3d30b8b5188fb7ffb25f 398 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 394 3.2E-44 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RB11399 31fe1b0be941a8bf9e18aa480ae02e30 132 Pfam PF04134 Protein of unknown function, DUF393 14 123 6.9E-26 T 11-11-2016 IPR007263 Protein of unknown function DUF393 RB5788 c145df5e5f1ad3e0e724cceb176aba0d 600 Pfam PF07639 YTV 174 210 6.7E-8 T 11-11-2016 IPR011521 YTV RB11122 c1d8256b7589b733626d636354ad04c3 79 Pfam PF07625 Protein of unknown function (DUF1586) 2 21 7.6E-13 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB5078 8d47bd8cf1c90d64a60858194ff5ff11 486 Pfam PF04773 FecR protein 179 232 1.3E-4 T 11-11-2016 IPR006860 FecR protein RB10328 0928368f94b9df1980d117bbd1f4664d 227 PIRSF PIRSF018637 2 224 1.2E-35 T 11-11-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 RB10328 0928368f94b9df1980d117bbd1f4664d 227 Pfam PF12847 Methyltransferase domain 4 142 1.7E-33 T 11-11-2016 RB7791 91c062aaae4035a66711c127e52f5d1f 533 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 226 465 2.0E-47 T 11-11-2016 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain RB1185 f184c0f0ccbfd658efc38e4d44122edc 268 Pfam PF04986 Putative transposase 27 195 5.2E-45 T 11-11-2016 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 RB1252 72ff4e9bea2a4b60a302469590148229 665 Pfam PF14238 Domain of unknown function (DUF4340) 81 295 5.5E-26 T 11-11-2016 IPR025641 Domain of unknown function DUF4340 RB4426 e014429b6bae01a436c12fd82d064afd 60 Pfam PF13248 zinc-ribbon domain 13 37 1.3E-8 T 11-11-2016 RB4707 fb487399fcced45c949d084b19d6f617 356 Pfam PF06439 Domain of Unknown Function (DUF1080) 173 349 3.8E-38 T 11-11-2016 IPR010496 Domain of unknown function DUF1080 RB2075 c506fd5200bc14deba33255b50e6383a 305 Pfam PF11950 Protein of unknown function (DUF3467) 82 205 4.4E-34 T 11-11-2016 IPR021857 Protein of unknown function DUF3467 RB2075 c506fd5200bc14deba33255b50e6383a 305 Pfam PF11950 Protein of unknown function (DUF3467) 232 296 7.2E-8 T 11-11-2016 IPR021857 Protein of unknown function DUF3467 RB1066 6c9fa555a832a61568cb4da7d84ddd98 820 Gene3D G3DSA:3.30.450.40 65 225 7.9E-6 T 11-11-2016 IPR029016 GAF domain-like RB13063 59b6ad8b829328ec1245c8db373a00f4 362 Pfam PF07811 TadE-like protein 11 53 7.7E-8 T 11-11-2016 IPR012495 TadE-like RB2287 7ce2324b47b86370ca170047c7a123cc 63 Pfam PF07625 Protein of unknown function (DUF1586) 19 40 5.2E-13 T 11-11-2016 IPR011479 Protein of unknown function DUF1586 RB7108 618f6e810a44f0bf09c3a8cd9a78336c 91 Pfam PF07628 Protein of unknown function (DUF1589) 43 83 4.7E-9 T 11-11-2016 IPR011480 Protein of unknown function DUF1589 RB6586 119b168f023d74966ed7ab4e2682ce2d 206 Pfam PF06078 Bacterial protein of unknown function (DUF937) 8 145 3.2E-30 T 11-11-2016 IPR009282 Protein of unknown function DUF937 RB4650 3dfbdd163d681defb846b7712062e072 73 Pfam PF04102 SlyX 5 73 1.6E-17 T 11-11-2016 IPR007236 SlyX RB11050 bcb1f9c77856290464296529895acc66 394 Pfam PF02690 Na+/Pi-cotransporter 42 179 1.7E-22 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RB11050 bcb1f9c77856290464296529895acc66 394 Pfam PF02690 Na+/Pi-cotransporter 229 344 3.6E-17 T 11-11-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RB11226 74ebe45bfd73d20c6e67ca2024df5436 294 Pfam PF01925 Sulfite exporter TauE/SafE 26 285 1.0E-53 T 11-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021