RPE_RS00080	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS00080	PWY-4521	arsenite oxidation I (respiratory)
RPE_RS00080	PWY-6692	Fe(II) oxidation
RPE_RS00080	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS00085	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS00085	PWY-4521	arsenite oxidation I (respiratory)
RPE_RS00085	PWY-6692	Fe(II) oxidation
RPE_RS00085	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS00090	PWY-6654	phosphopantothenate biosynthesis III
RPE_RS00115	PWY-4041	&gamma;-glutamyl cycle
RPE_RS00115	PWY-5826	hypoglycin biosynthesis
RPE_RS00125	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_RS00125	PWY-6124	inosine-5'-phosphate biosynthesis II
RPE_RS00125	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_RS00130	PWY-7651	heparan sulfate degradation
RPE_RS00135	PWY-6825	phosphatidylcholine biosynthesis V
RPE_RS00160	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPE_RS00160	PWY-5491	diethylphosphate degradation
RPE_RS00165	PWY-4983	L-citrulline-nitric oxide cycle
RPE_RS00165	PWY-4984	urea cycle
RPE_RS00165	PWY-5	canavanine biosynthesis
RPE_RS00165	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS00165	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_RS00185	PWY-2201	folate transformations I
RPE_RS00225	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RPE_RS00225	PWY-2201	folate transformations I
RPE_RS00225	PWY-3841	folate transformations II
RPE_RS00225	PWY-5030	L-histidine degradation III
RPE_RS00225	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS00225	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPE_RS00320	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_RS00320	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_RS00325	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RPE_RS00325	PWY-5368	dimorphecolate biosynthesis
RPE_RS00325	PWY-5995	linoleate biosynthesis I (plants)
RPE_RS00325	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RPE_RS00325	PWY-6803	phosphatidylcholine acyl editing
RPE_RS00325	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RPE_RS00325	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RPE_RS00325	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RPE_RS00325	PWY-7470	phosphatidylcholine biosynthesis VII
RPE_RS00325	PWY-7618	ricinoleate biosynthesis
RPE_RS00330	PWY-5667	CDP-diacylglycerol biosynthesis I
RPE_RS00330	PWY-5981	CDP-diacylglycerol biosynthesis III
RPE_RS00345	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RPE_RS00345	PWY-7118	chitin degradation to ethanol
RPE_RS00540	PWY-2201	folate transformations I
RPE_RS00540	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS00540	PWY-6167	flavin biosynthesis II (archaea)
RPE_RS00560	PWY-2161	folate polyglutamylation
RPE_RS00665	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPE_RS00680	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPE_RS00705	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS00705	PWY-5743	3-hydroxypropanoate cycle
RPE_RS00705	PWY-5744	glyoxylate assimilation
RPE_RS00705	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS00705	PWY-6679	jadomycin biosynthesis
RPE_RS00705	PWY-6722	candicidin biosynthesis
RPE_RS00705	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS00720	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_RS00725	PWY-6164	3-dehydroquinate biosynthesis I
RPE_RS00745	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS00750	PWY-6502	oxidized GTP and dGTP detoxification
RPE_RS00790	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RPE_RS00790	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RPE_RS00790	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RPE_RS00790	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
RPE_RS00790	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
RPE_RS00790	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
RPE_RS00790	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
RPE_RS00790	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RPE_RS00790	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPE_RS00790	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
RPE_RS00795	PWY-2941	L-lysine biosynthesis II
RPE_RS00795	PWY-2942	L-lysine biosynthesis III
RPE_RS00795	PWY-5097	L-lysine biosynthesis VI
RPE_RS00795	PWY-6559	spermidine biosynthesis II
RPE_RS00795	PWY-6562	norspermidine biosynthesis
RPE_RS00795	PWY-7153	grixazone biosynthesis
RPE_RS00825	PWY-5386	methylglyoxal degradation I
RPE_RS00840	PWY-5676	acetyl-CoA fermentation to butanoate II
RPE_RS00840	PWY-5741	ethylmalonyl-CoA pathway
RPE_RS00840	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_RS00965	PWY-6854	ethylene biosynthesis III (microbes)
RPE_RS01060	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RPE_RS01060	PWY-5368	dimorphecolate biosynthesis
RPE_RS01060	PWY-5995	linoleate biosynthesis I (plants)
RPE_RS01060	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RPE_RS01060	PWY-6803	phosphatidylcholine acyl editing
RPE_RS01060	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RPE_RS01060	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RPE_RS01060	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RPE_RS01060	PWY-7470	phosphatidylcholine biosynthesis VII
RPE_RS01060	PWY-7618	ricinoleate biosynthesis
RPE_RS01250	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_RS01250	PWY-2361	3-oxoadipate degradation
RPE_RS01250	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RPE_RS01275	PWY-5506	methanol oxidation to formaldehyde IV
RPE_RS01285	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_RS01285	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_RS01285	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_RS01285	PWY-6113	superpathway of mycolate biosynthesis
RPE_RS01285	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_RS01285	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_RS01285	PWY-7663	gondoate biosynthesis (anaerobic)
RPE_RS01285	PWY-7664	oleate biosynthesis IV (anaerobic)
RPE_RS01285	PWYG-321	mycolate biosynthesis
RPE_RS01295	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_RS01295	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_RS01295	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_RS01295	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPE_RS01295	PWY-6113	superpathway of mycolate biosynthesis
RPE_RS01295	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_RS01295	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_RS01295	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS01295	PWY-7663	gondoate biosynthesis (anaerobic)
RPE_RS01295	PWY-7664	oleate biosynthesis IV (anaerobic)
RPE_RS01295	PWYG-321	mycolate biosynthesis
RPE_RS01340	PWY-3341	L-proline biosynthesis III
RPE_RS01340	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPE_RS01345	PWY-5381	pyridine nucleotide cycling (plants)
RPE_RS01345	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPE_RS01355	PWY-6825	phosphatidylcholine biosynthesis V
RPE_RS01395	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_RS01395	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_RS01410	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS01420	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS01455	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPE_RS01455	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPE_RS01485	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPE_RS01490	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPE_RS01495	PWY-5392	reductive TCA cycle II
RPE_RS01495	PWY-5537	pyruvate fermentation to acetate V
RPE_RS01495	PWY-5538	pyruvate fermentation to acetate VI
RPE_RS01495	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS01495	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS01495	PWY-6728	methylaspartate cycle
RPE_RS01495	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS01495	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS01500	PWY-5392	reductive TCA cycle II
RPE_RS01500	PWY-5537	pyruvate fermentation to acetate V
RPE_RS01500	PWY-5538	pyruvate fermentation to acetate VI
RPE_RS01500	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS01500	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS01500	PWY-6728	methylaspartate cycle
RPE_RS01500	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS01500	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS01505	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_RS01505	PWY-5392	reductive TCA cycle II
RPE_RS01505	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_RS01505	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS01505	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS01505	PWY-6728	methylaspartate cycle
RPE_RS01505	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS01505	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_RS01505	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_RS01610	PWY-2941	L-lysine biosynthesis II
RPE_RS01610	PWY-5097	L-lysine biosynthesis VI
RPE_RS01655	PWY-6829	tRNA methylation (yeast)
RPE_RS01655	PWY-7285	methylwyosine biosynthesis
RPE_RS01655	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RPE_RS01670	PWY-5278	sulfite oxidation III
RPE_RS01670	PWY-5340	sulfate activation for sulfonation
RPE_RS01670	PWY-6683	sulfate reduction III (assimilatory)
RPE_RS01670	PWY-6932	selenate reduction
RPE_RS01675	PWY-5278	sulfite oxidation III
RPE_RS01675	PWY-5340	sulfate activation for sulfonation
RPE_RS01675	PWY-6683	sulfate reduction III (assimilatory)
RPE_RS01675	PWY-6932	selenate reduction
RPE_RS01710	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_RS01710	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS01710	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_RS01710	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_RS01715	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_RS01715	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS01720	PWY-2941	L-lysine biosynthesis II
RPE_RS01720	PWY-2942	L-lysine biosynthesis III
RPE_RS01720	PWY-5097	L-lysine biosynthesis VI
RPE_RS01730	PWY-5686	UMP biosynthesis
RPE_RS01775	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPE_RS01790	PWY-2201	folate transformations I
RPE_RS01825	PWY-3961	phosphopantothenate biosynthesis II
RPE_RS01915	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS01965	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_RS02120	PWY-5532	adenosine nucleotides degradation IV
RPE_RS02120	PWY-5723	Rubisco shunt
RPE_RS02230	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_RS02240	PWY-7205	CMP phosphorylation
RPE_RS02290	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS02290	PWY-5743	3-hydroxypropanoate cycle
RPE_RS02290	PWY-5744	glyoxylate assimilation
RPE_RS02290	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS02290	PWY-6679	jadomycin biosynthesis
RPE_RS02290	PWY-6722	candicidin biosynthesis
RPE_RS02290	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS02295	PWY-2161	folate polyglutamylation
RPE_RS02340	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_RS02340	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS02340	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS02340	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RPE_RS02360	PWY-5839	menaquinol-7 biosynthesis
RPE_RS02360	PWY-5844	menaquinol-9 biosynthesis
RPE_RS02360	PWY-5849	menaquinol-6 biosynthesis
RPE_RS02360	PWY-5890	menaquinol-10 biosynthesis
RPE_RS02360	PWY-5891	menaquinol-11 biosynthesis
RPE_RS02360	PWY-5892	menaquinol-12 biosynthesis
RPE_RS02360	PWY-5895	menaquinol-13 biosynthesis
RPE_RS02380	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_RS02405	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPE_RS02425	PWY-2941	L-lysine biosynthesis II
RPE_RS02425	PWY-2942	L-lysine biosynthesis III
RPE_RS02425	PWY-5097	L-lysine biosynthesis VI
RPE_RS02425	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS02425	PWY-6559	spermidine biosynthesis II
RPE_RS02425	PWY-6562	norspermidine biosynthesis
RPE_RS02425	PWY-7153	grixazone biosynthesis
RPE_RS02425	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_RS02520	PWY-6700	queuosine biosynthesis
RPE_RS02530	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
RPE_RS02575	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS02575	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPE_RS02575	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_RS02575	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS02575	PWY-6728	methylaspartate cycle
RPE_RS02575	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS02575	PWY-7254	TCA cycle VII (acetate-producers)
RPE_RS02575	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS02580	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS02580	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPE_RS02580	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_RS02580	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS02580	PWY-6728	methylaspartate cycle
RPE_RS02580	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS02580	PWY-7254	TCA cycle VII (acetate-producers)
RPE_RS02580	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS02750	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_RS02750	PWY-6124	inosine-5'-phosphate biosynthesis II
RPE_RS02750	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_RS02755	PWY-3341	L-proline biosynthesis III
RPE_RS02755	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPE_RS02915	PWY-6085	2,4-dichlorophenoxyacetate  degradation
RPE_RS02915	PWY-6086	4-chloro-2-methylphenoxyacetate degradation
RPE_RS02920	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_RS02940	PWY-6080	4-ethylphenol degradation (anaerobic)
RPE_RS02940	PWY-7046	4-coumarate degradation (anaerobic)
RPE_RS02945	PWY-6080	4-ethylphenol degradation (anaerobic)
RPE_RS02945	PWY-7046	4-coumarate degradation (anaerobic)
RPE_RS02950	PWY-6080	4-ethylphenol degradation (anaerobic)
RPE_RS02950	PWY-7046	4-coumarate degradation (anaerobic)
RPE_RS03005	PWY-5392	reductive TCA cycle II
RPE_RS03005	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS03055	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RPE_RS03100	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS03100	PWY-4521	arsenite oxidation I (respiratory)
RPE_RS03100	PWY-6692	Fe(II) oxidation
RPE_RS03100	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS03170	PWY-5750	itaconate biosynthesis
RPE_RS03170	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS03170	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RPE_RS03235	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS03235	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_RS03370	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_RS03370	PWY-5109	2-methylbutanoate biosynthesis
RPE_RS03370	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_RS03370	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_RS03370	PWY-5177	glutaryl-CoA degradation
RPE_RS03370	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS03370	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_RS03370	PWY-6583	pyruvate fermentation to butanol I
RPE_RS03370	PWY-6863	pyruvate fermentation to hexanol
RPE_RS03370	PWY-6883	pyruvate fermentation to butanol II
RPE_RS03370	PWY-6944	androstenedione degradation
RPE_RS03370	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_RS03370	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_RS03370	PWY-7007	methyl ketone biosynthesis
RPE_RS03370	PWY-7046	4-coumarate degradation (anaerobic)
RPE_RS03370	PWY-7094	fatty acid salvage
RPE_RS03370	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_RS03370	PWY-735	jasmonic acid biosynthesis
RPE_RS03370	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_RS03370	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RPE_RS03370	PWY-7726	RPE_RS03370
RPE_RS03385	PWY-6840	homoglutathione biosynthesis
RPE_RS03385	PWY-7255	ergothioneine biosynthesis I (bacteria)
RPE_RS03435	PWY-3801	sucrose degradation II (sucrose synthase)
RPE_RS03435	PWY-6527	stachyose degradation
RPE_RS03435	PWY-7238	sucrose biosynthesis II
RPE_RS03435	PWY-7343	UDP-glucose biosynthesis
RPE_RS03550	PWY-7731	RPE_RS03550
RPE_RS03590	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_RS03590	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS03590	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_RS03590	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_RS03605	PWY-5686	UMP biosynthesis
RPE_RS03685	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_RS03715	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS03740	PWY-7701	RPE_RS03740
RPE_RS03755	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
RPE_RS03755	PWY-6217	3,4-dichlorobenzoate degradation
RPE_RS03790	PWY-723	alkylnitronates degradation
RPE_RS04005	PWY-5663	tetrahydrobiopterin biosynthesis I
RPE_RS04005	PWY-5664	tetrahydrobiopterin biosynthesis II
RPE_RS04005	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPE_RS04005	PWY-6703	preQ<sub>0</sub> biosynthesis
RPE_RS04005	PWY-6983	tetrahydrobiopterin biosynthesis III
RPE_RS04005	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RPE_RS04025	PWY-622	starch biosynthesis
RPE_RS04030	PWY-622	starch biosynthesis
RPE_RS04120	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_RS04120	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_RS04240	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS04250	PWY-6420	pyrroloquinoline quinone biosynthesis
RPE_RS04395	PWY-2201	folate transformations I
RPE_RS04435	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
RPE_RS04520	PWY-6832	2-aminoethylphosphonate degradation II
RPE_RS04660	PWY-5269	cardiolipin biosynthesis II
RPE_RS04660	PWY-5668	cardiolipin biosynthesis I
RPE_RS04670	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS04680	PWY-6825	phosphatidylcholine biosynthesis V
RPE_RS04695	PWY-6825	phosphatidylcholine biosynthesis V
RPE_RS04765	PWY-6703	preQ<sub>0</sub> biosynthesis
RPE_RS04770	PWY-6004	glycine betaine biosynthesis V (from glycine)
RPE_RS04775	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS04775	PWY-6692	Fe(II) oxidation
RPE_RS04775	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPE_RS04775	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS04925	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS04925	PWY-5686	UMP biosynthesis
RPE_RS04925	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_RS04935	PWY-1341	phenylacetate degradation II (anaerobic)
RPE_RS04935	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPE_RS04935	PWY-7716	RPE_RS04935
RPE_RS04970	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RPE_RS05010	PWY-1341	phenylacetate degradation II (anaerobic)
RPE_RS05010	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
RPE_RS05010	PWY-7716	RPE_RS05010
RPE_RS05390	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS05390	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS05390	PWY-7560	methylerythritol phosphate pathway II
RPE_RS05470	PWY-3821	galactose degradation III
RPE_RS05470	PWY-6317	galactose degradation I (Leloir pathway)
RPE_RS05470	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPE_RS05470	PWY-6527	stachyose degradation
RPE_RS05470	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPE_RS05470	PWY-7344	UDP-D-galactose biosynthesis
RPE_RS05525	PWY-6655	xanthan biosynthesis
RPE_RS05525	PWY-6658	acetan biosynthesis
RPE_RS05540	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPE_RS05540	PWY-622	starch biosynthesis
RPE_RS05650	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPE_RS05810	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS06025	PWY-5941	glycogen degradation II (eukaryotic)
RPE_RS06025	PWY-6724	starch degradation II
RPE_RS06025	PWY-6737	starch degradation V
RPE_RS06025	PWY-7238	sucrose biosynthesis II
RPE_RS06115	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS06115	PWY-6692	Fe(II) oxidation
RPE_RS06115	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPE_RS06115	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS06175	PWY-5169	cyanurate degradation
RPE_RS06175	PWY-5703	urea degradation I
RPE_RS06180	PWY-5169	cyanurate degradation
RPE_RS06180	PWY-5703	urea degradation I
RPE_RS06180	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPE_RS06370	PWY-6683	sulfate reduction III (assimilatory)
RPE_RS06430	PWY-2661	trehalose biosynthesis V
RPE_RS06430	PWY-6902	chitin degradation II
RPE_RS06470	PWY-2723	trehalose degradation V
RPE_RS06470	PWY-3801	sucrose degradation II (sucrose synthase)
RPE_RS06470	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPE_RS06470	PWY-5661	GDP-glucose biosynthesis
RPE_RS06470	PWY-5940	streptomycin biosynthesis
RPE_RS06470	PWY-5941	glycogen degradation II (eukaryotic)
RPE_RS06470	PWY-622	starch biosynthesis
RPE_RS06470	PWY-6731	starch degradation III
RPE_RS06470	PWY-6737	starch degradation V
RPE_RS06470	PWY-6749	CMP-legionaminate biosynthesis I
RPE_RS06470	PWY-7238	sucrose biosynthesis II
RPE_RS06470	PWY-7343	UDP-glucose biosynthesis
RPE_RS06585	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_RS06585	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_RS06590	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06590	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06595	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06595	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06625	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06625	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06635	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06635	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06650	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06650	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06690	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPE_RS06695	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPE_RS06695	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06695	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06700	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
RPE_RS06700	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06700	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06715	PWY-101	photosynthesis light reactions
RPE_RS06720	PWY-101	photosynthesis light reactions
RPE_RS06785	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06785	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06790	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06790	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06795	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06795	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06800	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06800	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06805	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS06805	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS06845	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_RS06845	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPE_RS06855	PWY-5532	adenosine nucleotides degradation IV
RPE_RS06855	PWY-5723	Rubisco shunt
RPE_RS06860	PWY-5532	adenosine nucleotides degradation IV
RPE_RS06860	PWY-5723	Rubisco shunt
RPE_RS06875	PWY-5344	L-homocysteine biosynthesis
RPE_RS06875	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPE_RS06890	PWY-4041	&gamma;-glutamyl cycle
RPE_RS06890	PWY-5826	hypoglycin biosynthesis
RPE_RS06940	PWY-4261	glycerol degradation I
RPE_RS06940	PWY-6118	glycerol-3-phosphate shuttle
RPE_RS06940	PWY-6952	glycerophosphodiester degradation
RPE_RS07025	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS07100	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPE_RS07100	PWY-6167	flavin biosynthesis II (archaea)
RPE_RS07100	PWY-6168	flavin biosynthesis III (fungi)
RPE_RS07165	PWY-5057	L-valine degradation II
RPE_RS07165	PWY-5076	L-leucine degradation III
RPE_RS07165	PWY-5078	L-isoleucine degradation II
RPE_RS07165	PWY-5101	L-isoleucine biosynthesis II
RPE_RS07165	PWY-5103	L-isoleucine biosynthesis III
RPE_RS07165	PWY-5104	L-isoleucine biosynthesis IV
RPE_RS07165	PWY-5108	L-isoleucine biosynthesis V
RPE_RS07185	PWY-3341	L-proline biosynthesis III
RPE_RS07185	PWY-4981	L-proline biosynthesis II (from arginine)
RPE_RS07185	PWY-6344	L-ornithine degradation II (Stickland reaction)
RPE_RS07195	PWY-6167	flavin biosynthesis II (archaea)
RPE_RS07195	PWY-6168	flavin biosynthesis III (fungi)
RPE_RS07235	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RPE_RS07285	PWY-3821	galactose degradation III
RPE_RS07285	PWY-6317	galactose degradation I (Leloir pathway)
RPE_RS07285	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPE_RS07285	PWY-6527	stachyose degradation
RPE_RS07285	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPE_RS07285	PWY-7344	UDP-D-galactose biosynthesis
RPE_RS07365	PWY-6910	hydroxymethylpyrimidine salvage
RPE_RS07365	PWY-7356	thiamin salvage IV (yeast)
RPE_RS07365	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPE_RS07400	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS07400	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_RS07400	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPE_RS07400	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS07400	PWY-5723	Rubisco shunt
RPE_RS07400	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS07400	PWY-6886	1-butanol autotrophic biosynthesis
RPE_RS07400	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS07400	PWY-7003	glycerol degradation to butanol
RPE_RS07400	PWY-7124	ethylene biosynthesis V (engineered)
RPE_RS07400	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPE_RS07440	PWY-101	photosynthesis light reactions
RPE_RS07440	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPE_RS07580	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_RS07580	PWY-5723	Rubisco shunt
RPE_RS07605	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPE_RS07620	PWY-3221	dTDP-L-rhamnose biosynthesis II
RPE_RS07620	PWY-6808	dTDP-D-forosamine biosynthesis
RPE_RS07620	PWY-6942	dTDP-D-desosamine biosynthesis
RPE_RS07620	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RPE_RS07620	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RPE_RS07620	PWY-6974	dTDP-L-olivose biosynthesis
RPE_RS07620	PWY-6976	dTDP-L-mycarose biosynthesis
RPE_RS07620	PWY-7104	dTDP-L-megosamine biosynthesis
RPE_RS07620	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RPE_RS07620	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RPE_RS07620	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RPE_RS07620	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RPE_RS07620	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RPE_RS07620	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RPE_RS07620	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RPE_RS07620	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RPE_RS07620	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
RPE_RS07620	PWY-7688	RPE_RS07620
RPE_RS07625	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS07625	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS07625	PWY-7560	methylerythritol phosphate pathway II
RPE_RS07860	PWY-6825	phosphatidylcholine biosynthesis V
RPE_RS07895	PWY-5392	reductive TCA cycle II
RPE_RS07895	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_RS07895	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS07895	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS07895	PWY-6728	methylaspartate cycle
RPE_RS07895	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS07895	PWY-7254	TCA cycle VII (acetate-producers)
RPE_RS07895	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS08060	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS08060	PWY-6549	L-glutamine biosynthesis III
RPE_RS08060	PWY-6728	methylaspartate cycle
RPE_RS08060	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS08060	PWY-7124	ethylene biosynthesis V (engineered)
RPE_RS08060	PWY-7254	TCA cycle VII (acetate-producers)
RPE_RS08060	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPE_RS08065	PWY-6004	glycine betaine biosynthesis V (from glycine)
RPE_RS08090	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_RS08090	PWY-6124	inosine-5'-phosphate biosynthesis II
RPE_RS08090	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_RS08095	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_RS08095	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_RS08095	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_RS08105	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_RS08105	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_RS08105	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_RS08120	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_RS08120	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_RS08120	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_RS08150	PWY-7255	ergothioneine biosynthesis I (bacteria)
RPE_RS08235	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_RS08235	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_RS08260	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_RS08260	PWY-6124	inosine-5'-phosphate biosynthesis II
RPE_RS08260	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS08260	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_RS08275	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_RS08275	PWY-5723	Rubisco shunt
RPE_RS08285	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS08330	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
RPE_RS08670	PWY-5344	L-homocysteine biosynthesis
RPE_RS08670	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPE_RS08725	PWY-5392	reductive TCA cycle II
RPE_RS08725	PWY-5537	pyruvate fermentation to acetate V
RPE_RS08725	PWY-5538	pyruvate fermentation to acetate VI
RPE_RS08725	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS08725	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS08725	PWY-6728	methylaspartate cycle
RPE_RS08725	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS08725	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS08835	PWY-6728	methylaspartate cycle
RPE_RS08835	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS08835	PWY-7118	chitin degradation to ethanol
RPE_RS08835	PWY-7294	xylose degradation IV
RPE_RS08835	PWY-7295	L-arabinose degradation IV
RPE_RS08855	PWY-5340	sulfate activation for sulfonation
RPE_RS08865	PWY-5194	siroheme biosynthesis
RPE_RS08865	PWY-5441	S-methyl-L-methionine cycle
RPE_RS08865	PWY-702	L-methionine biosynthesis II
RPE_RS08865	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_RS08875	PWY-6683	sulfate reduction III (assimilatory)
RPE_RS09020	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_RS09020	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_RS09020	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS09020	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS09020	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RPE_RS09020	PWY-6549	L-glutamine biosynthesis III
RPE_RS09020	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_RS09020	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_RS09020	PWY-7124	ethylene biosynthesis V (engineered)
RPE_RS09045	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPE_RS09170	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPE_RS09170	PWY-7494	choline degradation IV
RPE_RS09330	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_RS09335	PWY-5743	3-hydroxypropanoate cycle
RPE_RS09335	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS09335	PWY-6728	methylaspartate cycle
RPE_RS09335	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS09340	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPE_RS09340	PWY-6148	tetrahydromethanopterin biosynthesis
RPE_RS09340	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPE_RS09340	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPE_RS09345	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPE_RS09345	PWY-6148	tetrahydromethanopterin biosynthesis
RPE_RS09345	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RPE_RS09345	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPE_RS09350	PWY-6614	tetrahydrofolate biosynthesis
RPE_RS09815	PWY-6654	phosphopantothenate biosynthesis III
RPE_RS09835	PWY-6695	oxalate degradation II
RPE_RS09960	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS09970	PWY-181	photorespiration
RPE_RS09975	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_RS09975	PWY-5723	Rubisco shunt
RPE_RS09985	PWY-4081	glutathione redox reactions I
RPE_RS09995	PWY-6164	3-dehydroquinate biosynthesis I
RPE_RS10000	PWY-7039	phosphatidate metabolism, as a signaling molecule
RPE_RS10045	PWY-5101	L-isoleucine biosynthesis II
RPE_RS10045	PWY-6871	3-methylbutanol biosynthesis
RPE_RS10075	PWY-5669	phosphatidylethanolamine biosynthesis I
RPE_RS10080	PWY-5669	phosphatidylethanolamine biosynthesis I
RPE_RS10140	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_RS10140	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_RS10140	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_RS10140	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPE_RS10140	PWY-6113	superpathway of mycolate biosynthesis
RPE_RS10140	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_RS10140	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_RS10140	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS10140	PWY-7663	gondoate biosynthesis (anaerobic)
RPE_RS10140	PWY-7664	oleate biosynthesis IV (anaerobic)
RPE_RS10140	PWYG-321	mycolate biosynthesis
RPE_RS10205	PWY-5350	thiosulfate disproportionation III (rhodanese)
RPE_RS10250	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_RS10250	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPE_RS10250	PWY-6936	seleno-amino acid biosynthesis
RPE_RS10250	PWY-702	L-methionine biosynthesis II
RPE_RS10380	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RPE_RS10385	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPE_RS10385	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPE_RS10385	PWY-6897	thiamin salvage II
RPE_RS10385	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPE_RS10385	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPE_RS10385	PWY-7356	thiamin salvage IV (yeast)
RPE_RS10385	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPE_RS10390	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS10390	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS10535	PWY-2201	folate transformations I
RPE_RS10555	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_RS10555	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_RS10560	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_RS10560	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPE_RS10560	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_RS10565	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_RS10565	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_RS10575	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_RS10575	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RPE_RS10575	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPE_RS10575	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_RS10580	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_RS10580	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_RS10590	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_RS10590	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_RS10605	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_RS10605	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_RS10625	PWY-2201	folate transformations I
RPE_RS10625	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS10750	PWY-5392	reductive TCA cycle II
RPE_RS10750	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RPE_RS10750	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS10750	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS10750	PWY-6728	methylaspartate cycle
RPE_RS10750	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS10750	PWY-7254	TCA cycle VII (acetate-producers)
RPE_RS10750	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS10775	PWY-3841	folate transformations II
RPE_RS10775	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS10775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS10775	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_RS10775	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPE_RS10775	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_RS10780	PWY-3841	folate transformations II
RPE_RS10780	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS10780	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS10780	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_RS10780	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPE_RS10780	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_RS10905	PWY-3841	folate transformations II
RPE_RS10905	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS10905	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS10905	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_RS10905	PWY-7199	pyrimidine deoxyribonucleosides salvage
RPE_RS10905	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_RS10920	PWY-3841	folate transformations II
RPE_RS10920	PWY-6614	tetrahydrofolate biosynthesis
RPE_RS10965	PWY-2781	<i>cis</i>-zeatin biosynthesis
RPE_RS10970	PWY-5101	L-isoleucine biosynthesis II
RPE_RS10970	PWY-5103	L-isoleucine biosynthesis III
RPE_RS10970	PWY-5104	L-isoleucine biosynthesis IV
RPE_RS10970	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPE_RS10970	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPE_RS10970	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPE_RS10970	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_RS10980	PWY-5101	L-isoleucine biosynthesis II
RPE_RS10980	PWY-5103	L-isoleucine biosynthesis III
RPE_RS10980	PWY-5104	L-isoleucine biosynthesis IV
RPE_RS10980	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RPE_RS10980	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RPE_RS10980	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RPE_RS10980	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_RS11005	PWY-5103	L-isoleucine biosynthesis III
RPE_RS11005	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_RS11070	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPE_RS11075	PWY-6871	3-methylbutanol biosynthesis
RPE_RS11110	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_RS11110	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RPE_RS11110	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPE_RS11110	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_RS11125	PWY-5194	siroheme biosynthesis
RPE_RS11125	PWY-5441	S-methyl-L-methionine cycle
RPE_RS11125	PWY-702	L-methionine biosynthesis II
RPE_RS11125	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_RS11135	PWY-5194	siroheme biosynthesis
RPE_RS11135	PWY-5441	S-methyl-L-methionine cycle
RPE_RS11135	PWY-702	L-methionine biosynthesis II
RPE_RS11135	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_RS11145	PWY-2201	folate transformations I
RPE_RS11145	PWY-3841	folate transformations II
RPE_RS11145	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_RS11160	PWY-5194	siroheme biosynthesis
RPE_RS11160	PWY-5441	S-methyl-L-methionine cycle
RPE_RS11160	PWY-702	L-methionine biosynthesis II
RPE_RS11160	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RPE_RS11185	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_RS11185	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_RS11185	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_RS11190	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
RPE_RS11200	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_RS11200	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RPE_RS11210	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_RS11210	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_RS11210	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_RS11225	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_RS11225	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_RS11225	PWY-6268	adenosylcobalamin salvage from cobalamin
RPE_RS11225	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_RS11240	PWY-5443	aminopropanol phosphate biosynthesis I
RPE_RS11310	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS11310	PWY-5743	3-hydroxypropanoate cycle
RPE_RS11310	PWY-5744	glyoxylate assimilation
RPE_RS11310	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS11310	PWY-6679	jadomycin biosynthesis
RPE_RS11310	PWY-6722	candicidin biosynthesis
RPE_RS11310	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS11345	PWY-5101	L-isoleucine biosynthesis II
RPE_RS11345	PWY-5103	L-isoleucine biosynthesis III
RPE_RS11345	PWY-5104	L-isoleucine biosynthesis IV
RPE_RS11345	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_RS11550	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_RS11550	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPE_RS11550	PWY-6936	seleno-amino acid biosynthesis
RPE_RS11550	PWY-702	L-methionine biosynthesis II
RPE_RS11610	PWY-6936	seleno-amino acid biosynthesis
RPE_RS11610	PWY-7274	D-cycloserine biosynthesis
RPE_RS11655	PWY-6157	autoinducer AI-1 biosynthesis
RPE_RS11785	PWY-5663	tetrahydrobiopterin biosynthesis I
RPE_RS11785	PWY-5664	tetrahydrobiopterin biosynthesis II
RPE_RS11785	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RPE_RS11785	PWY-6703	preQ<sub>0</sub> biosynthesis
RPE_RS11785	PWY-6983	tetrahydrobiopterin biosynthesis III
RPE_RS11785	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RPE_RS11840	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPE_RS11840	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPE_RS11840	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RPE_RS11925	PWY-5392	reductive TCA cycle II
RPE_RS11925	PWY-5537	pyruvate fermentation to acetate V
RPE_RS11925	PWY-5538	pyruvate fermentation to acetate VI
RPE_RS11925	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS11925	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS11925	PWY-6728	methylaspartate cycle
RPE_RS11925	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS11925	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS11945	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS11945	PWY-5743	3-hydroxypropanoate cycle
RPE_RS11945	PWY-5744	glyoxylate assimilation
RPE_RS11945	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS11945	PWY-6679	jadomycin biosynthesis
RPE_RS11945	PWY-6722	candicidin biosynthesis
RPE_RS11945	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS11955	PWY-5642	2,4-dinitrotoluene degradation
RPE_RS11955	PWY-6373	acrylate degradation
RPE_RS12020	PWY-3841	folate transformations II
RPE_RS12020	PWY-6614	tetrahydrofolate biosynthesis
RPE_RS12540	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_RS12540	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS12540	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_RS12540	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_RS12540	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS12540	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS12540	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS12540	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPE_RS12560	PWY-381	nitrate reduction II (assimilatory)
RPE_RS12560	PWY-5675	nitrate reduction V (assimilatory)
RPE_RS12560	PWY-6549	L-glutamine biosynthesis III
RPE_RS12560	PWY-6963	ammonia assimilation cycle I
RPE_RS12560	PWY-6964	ammonia assimilation cycle II
RPE_RS12570	PWY-6938	NADH repair
RPE_RS12720	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS12720	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RPE_RS12720	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RPE_RS12720	PWY-6692	Fe(II) oxidation
RPE_RS12740	PWY-5741	ethylmalonyl-CoA pathway
RPE_RS12740	PWY-5743	3-hydroxypropanoate cycle
RPE_RS12740	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS12740	PWY-6728	methylaspartate cycle
RPE_RS12740	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS12830	PWY-5667	CDP-diacylglycerol biosynthesis I
RPE_RS12830	PWY-5981	CDP-diacylglycerol biosynthesis III
RPE_RS12835	PWY-7294	xylose degradation IV
RPE_RS12835	PWY-7295	L-arabinose degradation IV
RPE_RS12835	PWY-7560	methylerythritol phosphate pathway II
RPE_RS12855	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_RS12855	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_RS12855	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_RS12855	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPE_RS12855	PWY-6113	superpathway of mycolate biosynthesis
RPE_RS12855	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_RS12855	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_RS12855	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS12855	PWY-7663	gondoate biosynthesis (anaerobic)
RPE_RS12855	PWY-7664	oleate biosynthesis IV (anaerobic)
RPE_RS12855	PWYG-321	mycolate biosynthesis
RPE_RS12870	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPE_RS12870	PWY-622	starch biosynthesis
RPE_RS12880	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_RS12885	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_RS12900	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS13005	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS13005	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS13005	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS13005	PWY-7003	glycerol degradation to butanol
RPE_RS13015	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPE_RS13015	PWY-7177	UTP and CTP dephosphorylation II
RPE_RS13015	PWY-7185	UTP and CTP dephosphorylation I
RPE_RS13045	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPE_RS13045	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RPE_RS13050	PWY-101	photosynthesis light reactions
RPE_RS13050	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
RPE_RS13070	PWY-6700	queuosine biosynthesis
RPE_RS13075	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS13075	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_RS13075	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPE_RS13075	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS13075	PWY-5723	Rubisco shunt
RPE_RS13075	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS13075	PWY-6886	1-butanol autotrophic biosynthesis
RPE_RS13075	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS13075	PWY-7003	glycerol degradation to butanol
RPE_RS13075	PWY-7124	ethylene biosynthesis V (engineered)
RPE_RS13075	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPE_RS13130	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RPE_RS13130	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RPE_RS13430	PWY-31	canavanine degradation
RPE_RS13430	PWY-4984	urea cycle
RPE_RS13430	PWY-6305	putrescine biosynthesis IV
RPE_RS13430	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPE_RS13450	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS13455	PWY-5723	Rubisco shunt
RPE_RS13460	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_RS13460	PWY-5723	Rubisco shunt
RPE_RS13460	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS13460	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS13460	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS13460	PWY-7560	methylerythritol phosphate pathway II
RPE_RS13465	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS13465	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_RS13465	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS13465	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS13465	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPE_RS13470	PWY-5532	adenosine nucleotides degradation IV
RPE_RS13470	PWY-5723	Rubisco shunt
RPE_RS13545	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RPE_RS13560	PWY-5381	pyridine nucleotide cycling (plants)
RPE_RS13560	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPE_RS13560	PWY-6596	adenosine nucleotides degradation I
RPE_RS13560	PWY-6606	guanosine nucleotides degradation II
RPE_RS13560	PWY-6607	guanosine nucleotides degradation I
RPE_RS13560	PWY-6608	guanosine nucleotides degradation III
RPE_RS13560	PWY-7185	UTP and CTP dephosphorylation I
RPE_RS13585	PWY-7158	L-phenylalanine degradation V
RPE_RS13685	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPE_RS13685	PWY-622	starch biosynthesis
RPE_RS13690	PWY-6936	seleno-amino acid biosynthesis
RPE_RS13820	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPE_RS13820	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RPE_RS13835	PWY-7560	methylerythritol phosphate pathway II
RPE_RS13910	PWY-6700	queuosine biosynthesis
RPE_RS13915	PWY-6700	queuosine biosynthesis
RPE_RS13925	PWY-6936	seleno-amino acid biosynthesis
RPE_RS13990	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPE_RS13990	PWY-5667	CDP-diacylglycerol biosynthesis I
RPE_RS13990	PWY-6453	stigma estolide biosynthesis
RPE_RS13990	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RPE_RS13990	PWY-7587	oleate biosynthesis III (cyanobacteria)
RPE_RS13995	PWY-6749	CMP-legionaminate biosynthesis I
RPE_RS14055	PWY-6826	phosphatidylcholine biosynthesis VI
RPE_RS14110	PWY-1622	formaldehyde assimilation I (serine pathway)
RPE_RS14110	PWY-181	photorespiration
RPE_RS14110	PWY-2161	folate polyglutamylation
RPE_RS14110	PWY-2201	folate transformations I
RPE_RS14110	PWY-3661	glycine betaine degradation I
RPE_RS14110	PWY-3661-1	glycine betaine degradation II (mammalian)
RPE_RS14110	PWY-3841	folate transformations II
RPE_RS14110	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS14120	PWY-5525	D-glucuronate degradation I
RPE_RS14125	PWY-6167	flavin biosynthesis II (archaea)
RPE_RS14125	PWY-6168	flavin biosynthesis III (fungi)
RPE_RS14125	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS14130	PWY-6167	flavin biosynthesis II (archaea)
RPE_RS14130	PWY-6168	flavin biosynthesis III (fungi)
RPE_RS14140	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPE_RS14140	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPE_RS14140	PWY-6896	thiamin salvage I
RPE_RS14140	PWY-6897	thiamin salvage II
RPE_RS14195	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS14280	PWY-6655	xanthan biosynthesis
RPE_RS14280	PWY-6658	acetan biosynthesis
RPE_RS14335	PWY-5344	L-homocysteine biosynthesis
RPE_RS14335	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
RPE_RS14390	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_RS14390	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_RS14395	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_RS14395	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS14395	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS14395	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPE_RS14395	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_RS14395	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_RS14490	PWY-6703	preQ<sub>0</sub> biosynthesis
RPE_RS14625	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS14625	PWY-5743	3-hydroxypropanoate cycle
RPE_RS14625	PWY-5744	glyoxylate assimilation
RPE_RS14625	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS14625	PWY-6679	jadomycin biosynthesis
RPE_RS14625	PWY-6722	candicidin biosynthesis
RPE_RS14625	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS14670	PWY-5386	methylglyoxal degradation I
RPE_RS14750	PWY-7425	2-chloroacrylate degradation I
RPE_RS14755	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS14795	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS14795	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_RS14890	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS14890	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS14890	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS14890	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPE_RS14915	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS14915	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS14915	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS14915	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPE_RS15000	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_RS15000	PWY-6416	quinate degradation II
RPE_RS15000	PWY-6707	gallate biosynthesis
RPE_RS15115	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_RS15115	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_RS15190	PWY-6012	acyl carrier protein metabolism I
RPE_RS15190	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RPE_RS15230	PWY-2941	L-lysine biosynthesis II
RPE_RS15230	PWY-2942	L-lysine biosynthesis III
RPE_RS15230	PWY-5097	L-lysine biosynthesis VI
RPE_RS15350	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS15350	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPE_RS15350	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS15350	PWY-5723	Rubisco shunt
RPE_RS15350	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS15350	PWY-6886	1-butanol autotrophic biosynthesis
RPE_RS15350	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS15350	PWY-7003	glycerol degradation to butanol
RPE_RS15350	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPE_RS15350	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_RS15400	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPE_RS15405	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
RPE_RS15535	PWY-6748	nitrate reduction VII (denitrification)
RPE_RS15535	PWY-7084	nitrifier denitrification
RPE_RS15565	PWY-5480	pyruvate fermentation to ethanol I
RPE_RS15565	PWY-5485	pyruvate fermentation to acetate IV
RPE_RS15565	PWY-5493	reductive monocarboxylic acid cycle
RPE_RS15575	PWY-5532	adenosine nucleotides degradation IV
RPE_RS15580	PWY-7399	methylphosphonate degradation II
RPE_RS15585	PWY-7399	methylphosphonate degradation II
RPE_RS15595	PWY-7399	methylphosphonate degradation II
RPE_RS15610	PWY-7399	methylphosphonate degradation II
RPE_RS15645	PWY-7399	methylphosphonate degradation II
RPE_RS15650	PWY-5532	adenosine nucleotides degradation IV
RPE_RS15675	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_RS15675	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_RS15675	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_RS15735	PWY-6966	methanol oxidation to formaldehyde I
RPE_RS15855	PWY-5482	pyruvate fermentation to acetate II
RPE_RS15855	PWY-5485	pyruvate fermentation to acetate IV
RPE_RS15855	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS15860	PWY-1281	sulfoacetaldehyde degradation I
RPE_RS15860	PWY-5482	pyruvate fermentation to acetate II
RPE_RS15860	PWY-5485	pyruvate fermentation to acetate IV
RPE_RS15860	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS15860	PWY-6637	sulfolactate degradation II
RPE_RS15865	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_RS15865	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_RS15865	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_RS15865	PWY-6113	superpathway of mycolate biosynthesis
RPE_RS15865	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_RS15865	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_RS15865	PWY-7663	gondoate biosynthesis (anaerobic)
RPE_RS15865	PWY-7664	oleate biosynthesis IV (anaerobic)
RPE_RS15865	PWYG-321	mycolate biosynthesis
RPE_RS15885	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_RS15885	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPE_RS15885	PWY-6936	seleno-amino acid biosynthesis
RPE_RS15885	PWY-702	L-methionine biosynthesis II
RPE_RS15915	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS15915	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS15915	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS15920	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS15920	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS15920	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS15925	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_RS15925	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS15925	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_RS15925	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_RS15925	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS15925	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS15925	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS15925	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPE_RS15965	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS15965	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS15965	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS15965	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPE_RS16040	PWY-1281	sulfoacetaldehyde degradation I
RPE_RS16040	PWY-6637	sulfolactate degradation II
RPE_RS16045	PWY-5392	reductive TCA cycle II
RPE_RS16045	PWY-5537	pyruvate fermentation to acetate V
RPE_RS16045	PWY-5538	pyruvate fermentation to acetate VI
RPE_RS16045	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS16045	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS16045	PWY-6728	methylaspartate cycle
RPE_RS16045	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS16045	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS16050	PWY-5392	reductive TCA cycle II
RPE_RS16050	PWY-5537	pyruvate fermentation to acetate V
RPE_RS16050	PWY-5538	pyruvate fermentation to acetate VI
RPE_RS16050	PWY-5690	TCA cycle II (plants and fungi)
RPE_RS16050	PWY-5913	TCA cycle VI (obligate autotrophs)
RPE_RS16050	PWY-6728	methylaspartate cycle
RPE_RS16050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RPE_RS16050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RPE_RS16085	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_RS16085	PWY-5109	2-methylbutanoate biosynthesis
RPE_RS16085	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_RS16085	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_RS16085	PWY-5177	glutaryl-CoA degradation
RPE_RS16085	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS16085	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_RS16085	PWY-6583	pyruvate fermentation to butanol I
RPE_RS16085	PWY-6863	pyruvate fermentation to hexanol
RPE_RS16085	PWY-6883	pyruvate fermentation to butanol II
RPE_RS16085	PWY-6944	androstenedione degradation
RPE_RS16085	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_RS16085	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_RS16085	PWY-7007	methyl ketone biosynthesis
RPE_RS16085	PWY-7046	4-coumarate degradation (anaerobic)
RPE_RS16085	PWY-7094	fatty acid salvage
RPE_RS16085	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_RS16085	PWY-735	jasmonic acid biosynthesis
RPE_RS16085	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_RS16085	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RPE_RS16085	PWY-7726	RPE_RS16085
RPE_RS16160	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_RS16160	PWY-5109	2-methylbutanoate biosynthesis
RPE_RS16160	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_RS16160	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_RS16160	PWY-5177	glutaryl-CoA degradation
RPE_RS16160	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS16160	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_RS16160	PWY-6583	pyruvate fermentation to butanol I
RPE_RS16160	PWY-6863	pyruvate fermentation to hexanol
RPE_RS16160	PWY-6883	pyruvate fermentation to butanol II
RPE_RS16160	PWY-6944	androstenedione degradation
RPE_RS16160	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_RS16160	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_RS16160	PWY-7007	methyl ketone biosynthesis
RPE_RS16160	PWY-7046	4-coumarate degradation (anaerobic)
RPE_RS16160	PWY-7094	fatty acid salvage
RPE_RS16160	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_RS16160	PWY-735	jasmonic acid biosynthesis
RPE_RS16160	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_RS16160	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RPE_RS16160	PWY-7726	RPE_RS16160
RPE_RS16355	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS16360	PWY-6825	phosphatidylcholine biosynthesis V
RPE_RS16385	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RPE_RS16385	PWY-6596	adenosine nucleotides degradation I
RPE_RS16385	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS16425	PWY-1281	sulfoacetaldehyde degradation I
RPE_RS16425	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_RS16425	PWY-5482	pyruvate fermentation to acetate II
RPE_RS16425	PWY-5485	pyruvate fermentation to acetate IV
RPE_RS16425	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS16425	PWY-6637	sulfolactate degradation II
RPE_RS16425	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_RS16465	PWY-5269	cardiolipin biosynthesis II
RPE_RS16465	PWY-5668	cardiolipin biosynthesis I
RPE_RS16470	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_RS16470	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_RS16470	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_RS16475	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_RS16475	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RPE_RS16485	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RPE_RS16485	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RPE_RS16485	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS16485	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS16485	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RPE_RS16485	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RPE_RS16485	PWY-7205	CMP phosphorylation
RPE_RS16485	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RPE_RS16485	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS16485	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS16485	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS16485	PWY-7224	purine deoxyribonucleosides salvage
RPE_RS16485	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RPE_RS16485	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RPE_RS16535	PWY-7294	xylose degradation IV
RPE_RS16535	PWY-7295	L-arabinose degradation IV
RPE_RS16560	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS16585	PWY-5367	petroselinate biosynthesis
RPE_RS16585	PWY-5515	L-arabinose degradation II
RPE_RS16585	PWY-5525	D-glucuronate degradation I
RPE_RS16585	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_RS16585	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_RS16585	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_RS16585	PWY-5994	palmitate biosynthesis I (animals and fungi)
RPE_RS16585	PWY-6113	superpathway of mycolate biosynthesis
RPE_RS16585	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_RS16585	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_RS16585	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS16585	PWY-7663	gondoate biosynthesis (anaerobic)
RPE_RS16585	PWY-7664	oleate biosynthesis IV (anaerobic)
RPE_RS16585	PWYG-321	mycolate biosynthesis
RPE_RS16590	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS16590	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RPE_RS16590	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS16715	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_RS16745	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_RS16745	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_RS16745	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_RS16745	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPE_RS16785	PWY-6654	phosphopantothenate biosynthesis III
RPE_RS16825	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPE_RS16850	PWY-723	alkylnitronates degradation
RPE_RS16860	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RPE_RS16860	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RPE_RS16860	PWY-7717	RPE_RS16860
RPE_RS16860	PWY-7733	RPE_RS16860
RPE_RS16860	PWY-7734	RPE_RS16860
RPE_RS16895	PWY-6454	vancomycin resistance I
RPE_RS16895	PWY-6455	vancomycin resistance II
RPE_RS16900	PWY-5686	UMP biosynthesis
RPE_RS16905	PWY-5686	UMP biosynthesis
RPE_RS17045	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RPE_RS17185	PWY-5392	reductive TCA cycle II
RPE_RS17185	PWY-6038	citrate degradation
RPE_RS17190	PWY-6038	citrate degradation
RPE_RS17200	PWY-5796	malonate decarboxylase activation
RPE_RS17225	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RPE_RS17225	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RPE_RS17235	PWY-6339	syringate degradation
RPE_RS17490	PWY-6749	CMP-legionaminate biosynthesis I
RPE_RS17500	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPE_RS17500	PWY-622	starch biosynthesis
RPE_RS17515	PWY-5659	GDP-mannose biosynthesis
RPE_RS17515	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RPE_RS17555	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPE_RS17740	PWY-4381	fatty acid biosynthesis initiation I
RPE_RS17740	PWY-5743	3-hydroxypropanoate cycle
RPE_RS17740	PWY-5744	glyoxylate assimilation
RPE_RS17740	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS17740	PWY-6679	jadomycin biosynthesis
RPE_RS17740	PWY-6722	candicidin biosynthesis
RPE_RS17740	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RPE_RS17830	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_RS17860	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS18150	PWY-6936	seleno-amino acid biosynthesis
RPE_RS18240	PWY-5941	glycogen degradation II (eukaryotic)
RPE_RS18240	PWY-6724	starch degradation II
RPE_RS18240	PWY-6737	starch degradation V
RPE_RS18240	PWY-7238	sucrose biosynthesis II
RPE_RS18305	PWY-4202	arsenate detoxification I (glutaredoxin)
RPE_RS18305	PWY-4621	arsenate detoxification II (glutaredoxin)
RPE_RS18400	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RPE_RS18400	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RPE_RS18410	PWY-5532	adenosine nucleotides degradation IV
RPE_RS18410	PWY-5723	Rubisco shunt
RPE_RS18465	PWY-5101	L-isoleucine biosynthesis II
RPE_RS18465	PWY-5103	L-isoleucine biosynthesis III
RPE_RS18465	PWY-5104	L-isoleucine biosynthesis IV
RPE_RS18465	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_RS18485	PWY-3162	L-tryptophan degradation V (side chain pathway)
RPE_RS18485	PWY-5057	L-valine degradation II
RPE_RS18485	PWY-5076	L-leucine degradation III
RPE_RS18485	PWY-5078	L-isoleucine degradation II
RPE_RS18485	PWY-5079	L-phenylalanine degradation III
RPE_RS18485	PWY-5082	L-methionine degradation III
RPE_RS18485	PWY-5162	2-oxopentenoate degradation
RPE_RS18485	PWY-5436	L-threonine degradation IV
RPE_RS18485	PWY-5480	pyruvate fermentation to ethanol I
RPE_RS18485	PWY-5486	pyruvate fermentation to ethanol II
RPE_RS18485	PWY-5751	phenylethanol biosynthesis
RPE_RS18485	PWY-6313	serotonin degradation
RPE_RS18485	PWY-6333	acetaldehyde biosynthesis I
RPE_RS18485	PWY-6342	noradrenaline and adrenaline degradation
RPE_RS18485	PWY-6587	pyruvate fermentation to ethanol III
RPE_RS18485	PWY-6802	salidroside biosynthesis
RPE_RS18485	PWY-6871	3-methylbutanol biosynthesis
RPE_RS18485	PWY-7013	L-1,2-propanediol degradation
RPE_RS18485	PWY-7085	triethylamine degradation
RPE_RS18485	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_RS18485	PWY-7118	chitin degradation to ethanol
RPE_RS18485	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RPE_RS18485	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPE_RS18540	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RPE_RS18560	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_RS18560	PWY-3801	sucrose degradation II (sucrose synthase)
RPE_RS18560	PWY-5054	sorbitol biosynthesis I
RPE_RS18560	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RPE_RS18560	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPE_RS18560	PWY-5659	GDP-mannose biosynthesis
RPE_RS18560	PWY-5723	Rubisco shunt
RPE_RS18560	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS18560	PWY-621	sucrose degradation III (sucrose invertase)
RPE_RS18560	PWY-622	starch biosynthesis
RPE_RS18560	PWY-6981	chitin biosynthesis
RPE_RS18560	PWY-6992	1,5-anhydrofructose degradation
RPE_RS18560	PWY-7238	sucrose biosynthesis II
RPE_RS18560	PWY-7347	sucrose biosynthesis III
RPE_RS18560	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPE_RS18570	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RPE_RS18575	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPE_RS18575	PWY-6855	chitin degradation I (archaea)
RPE_RS18575	PWY-6906	chitin derivatives degradation
RPE_RS18580	PWY-5530	sorbitol biosynthesis II
RPE_RS18580	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_RS18595	PWY-5941	glycogen degradation II (eukaryotic)
RPE_RS18595	PWY-6724	starch degradation II
RPE_RS18595	PWY-6737	starch degradation V
RPE_RS18595	PWY-7238	sucrose biosynthesis II
RPE_RS18605	PWY-2622	trehalose biosynthesis IV
RPE_RS18610	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RPE_RS18610	PWY-622	starch biosynthesis
RPE_RS18625	PWY-2661	trehalose biosynthesis V
RPE_RS18655	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RPE_RS18655	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
RPE_RS18675	PWY-5704	urea degradation II
RPE_RS18685	PWY-5704	urea degradation II
RPE_RS18690	PWY-5704	urea degradation II
RPE_RS18850	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPE_RS18855	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RPE_RS18865	PWY-2201	folate transformations I
RPE_RS18865	PWY-3841	folate transformations II
RPE_RS18870	PWY-2201	folate transformations I
RPE_RS18870	PWY-3841	folate transformations II
RPE_RS18875	PWY-4261	glycerol degradation I
RPE_RS18905	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_RS18905	PWY-5109	2-methylbutanoate biosynthesis
RPE_RS18905	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_RS18905	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_RS18905	PWY-5177	glutaryl-CoA degradation
RPE_RS18905	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS18905	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_RS18905	PWY-6583	pyruvate fermentation to butanol I
RPE_RS18905	PWY-6863	pyruvate fermentation to hexanol
RPE_RS18905	PWY-6883	pyruvate fermentation to butanol II
RPE_RS18905	PWY-6944	androstenedione degradation
RPE_RS18905	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_RS18905	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_RS18905	PWY-7007	methyl ketone biosynthesis
RPE_RS18905	PWY-7046	4-coumarate degradation (anaerobic)
RPE_RS18905	PWY-7094	fatty acid salvage
RPE_RS18905	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_RS18905	PWY-735	jasmonic acid biosynthesis
RPE_RS18905	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_RS18905	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RPE_RS18905	PWY-7726	RPE_RS18905
RPE_RS19060	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPE_RS19060	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPE_RS19200	PWY-6854	ethylene biosynthesis III (microbes)
RPE_RS19225	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_RS19225	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_RS19225	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_RS19240	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_RS19240	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_RS19240	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_RS19310	PWY-5482	pyruvate fermentation to acetate II
RPE_RS19310	PWY-5485	pyruvate fermentation to acetate IV
RPE_RS19310	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS19315	PWY-1281	sulfoacetaldehyde degradation I
RPE_RS19315	PWY-5482	pyruvate fermentation to acetate II
RPE_RS19315	PWY-5485	pyruvate fermentation to acetate IV
RPE_RS19315	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS19315	PWY-6637	sulfolactate degradation II
RPE_RS19340	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS19340	PWY-4521	arsenite oxidation I (respiratory)
RPE_RS19340	PWY-6692	Fe(II) oxidation
RPE_RS19340	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS19400	PWY-4041	&gamma;-glutamyl cycle
RPE_RS19525	PWY-7723	RPE_RS19525
RPE_RS19530	PWY-7723	RPE_RS19530
RPE_RS19580	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RPE_RS19580	PWY-7494	choline degradation IV
RPE_RS19800	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS19800	PWY-5686	UMP biosynthesis
RPE_RS19800	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_RS19885	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS19885	PWY-6692	Fe(II) oxidation
RPE_RS19885	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
RPE_RS19885	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS20345	PWY-6523	nitrite-dependent anaerobic methane oxidation
RPE_RS20345	PWY-6748	nitrate reduction VII (denitrification)
RPE_RS20345	PWY-7084	nitrifier denitrification
RPE_RS20435	PWY-6123	inosine-5'-phosphate biosynthesis I
RPE_RS20435	PWY-7234	inosine-5'-phosphate biosynthesis III
RPE_RS20485	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS20485	PWY-4521	arsenite oxidation I (respiratory)
RPE_RS20485	PWY-6692	Fe(II) oxidation
RPE_RS20485	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS20540	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS20540	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RPE_RS20540	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS20540	PWY-5723	Rubisco shunt
RPE_RS20540	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS20540	PWY-6886	1-butanol autotrophic biosynthesis
RPE_RS20540	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS20540	PWY-7003	glycerol degradation to butanol
RPE_RS20540	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RPE_RS20540	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RPE_RS20635	PWY-702	L-methionine biosynthesis II
RPE_RS20695	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS20735	PWY-7181	pyrimidine deoxyribonucleosides degradation
RPE_RS20830	PWY-6749	CMP-legionaminate biosynthesis I
RPE_RS20840	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_RS21000	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_RS21005	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_RS21005	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RPE_RS21015	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
RPE_RS21030	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RPE_RS21030	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RPE_RS21030	PWY-6936	seleno-amino acid biosynthesis
RPE_RS21030	PWY-702	L-methionine biosynthesis II
RPE_RS21070	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RPE_RS21070	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RPE_RS21070	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RPE_RS21080	PWY-2201	folate transformations I
RPE_RS21080	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS21085	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RPE_RS21085	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_RS21175	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS21175	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS21175	PWY-7560	methylerythritol phosphate pathway II
RPE_RS21180	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPE_RS21185	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RPE_RS21185	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RPE_RS21250	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
RPE_RS21250	PWY-5940	streptomycin biosynthesis
RPE_RS21255	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
RPE_RS21290	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
RPE_RS21290	PWY-5739	GDP-D-perosamine biosynthesis
RPE_RS21290	PWY-5740	GDP-L-colitose biosynthesis
RPE_RS21290	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RPE_RS21290	PWY-7573	GDP-mycosamine biosynthesis
RPE_RS21330	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RPE_RS21340	PWY-3821	galactose degradation III
RPE_RS21340	PWY-6317	galactose degradation I (Leloir pathway)
RPE_RS21340	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RPE_RS21340	PWY-6527	stachyose degradation
RPE_RS21340	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RPE_RS21340	PWY-7344	UDP-D-galactose biosynthesis
RPE_RS21345	PWY-5659	GDP-mannose biosynthesis
RPE_RS21345	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RPE_RS21375	PWY-6749	CMP-legionaminate biosynthesis I
RPE_RS21570	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RPE_RS21570	PWY-6853	ethylene biosynthesis II (microbes)
RPE_RS21570	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RPE_RS21710	PWY-5344	L-homocysteine biosynthesis
RPE_RS21715	PWY-3461	L-tyrosine biosynthesis II
RPE_RS21715	PWY-3462	L-phenylalanine biosynthesis II
RPE_RS21715	PWY-6120	L-tyrosine biosynthesis III
RPE_RS21715	PWY-6627	salinosporamide A biosynthesis
RPE_RS21715	PWY-7626	bacilysin biosynthesis
RPE_RS21725	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
RPE_RS21785	PWY-6167	flavin biosynthesis II (archaea)
RPE_RS21785	PWY-6168	flavin biosynthesis III (fungi)
RPE_RS21785	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RPE_RS21815	PWY-5101	L-isoleucine biosynthesis II
RPE_RS21815	PWY-5103	L-isoleucine biosynthesis III
RPE_RS21815	PWY-5104	L-isoleucine biosynthesis IV
RPE_RS21815	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_RS21830	PWY-5381	pyridine nucleotide cycling (plants)
RPE_RS21870	PWY-5451	acetone degradation I (to methylglyoxal)
RPE_RS21870	PWY-6588	pyruvate fermentation to acetone
RPE_RS21870	PWY-6876	isopropanol biosynthesis
RPE_RS21870	PWY-7466	acetone degradation III (to propane-1,2-diol)
RPE_RS21940	PWY-5686	UMP biosynthesis
RPE_RS21990	PWY-5316	nicotine biosynthesis
RPE_RS21990	PWY-7342	superpathway of nicotine biosynthesis
RPE_RS21995	PWY-5316	nicotine biosynthesis
RPE_RS21995	PWY-7342	superpathway of nicotine biosynthesis
RPE_RS22000	PWY-5316	nicotine biosynthesis
RPE_RS22000	PWY-5381	pyridine nucleotide cycling (plants)
RPE_RS22000	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RPE_RS22000	PWY-7342	superpathway of nicotine biosynthesis
RPE_RS22015	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RPE_RS22015	PWY-6549	L-glutamine biosynthesis III
RPE_RS22015	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RPE_RS22015	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RPE_RS22075	PWY-7560	methylerythritol phosphate pathway II
RPE_RS22205	PWY-5958	acridone alkaloid biosynthesis
RPE_RS22205	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RPE_RS22205	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RPE_RS22245	PWY-6672	<i>cis</i>-genanyl-CoA degradation
RPE_RS22245	PWY-7118	chitin degradation to ethanol
RPE_RS22310	PWY-6098	diploterol and cycloartenol biosynthesis
RPE_RS22310	PWY-7072	hopanoid biosynthesis (bacteria)
RPE_RS22410	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RPE_RS22410	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RPE_RS22575	PWY-3081	L-lysine biosynthesis V
RPE_RS22575	PWY-6871	3-methylbutanol biosynthesis
RPE_RS22575	PWY-7710	RPE_RS22575
RPE_RS22580	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS22580	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS22580	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS22580	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RPE_RS22680	PWY-6823	molybdenum cofactor biosynthesis
RPE_RS22925	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_RS22935	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RPE_RS22935	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RPE_RS22935	PWY-5989	stearate biosynthesis II (bacteria and plants)
RPE_RS22935	PWY-6113	superpathway of mycolate biosynthesis
RPE_RS22935	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RPE_RS22935	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RPE_RS22935	PWY-7663	gondoate biosynthesis (anaerobic)
RPE_RS22935	PWY-7664	oleate biosynthesis IV (anaerobic)
RPE_RS22935	PWYG-321	mycolate biosynthesis
RPE_RS22950	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RPE_RS22950	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RPE_RS23040	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RPE_RS23040	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RPE_RS23040	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RPE_RS23070	PWY-2722	trehalose degradation IV
RPE_RS23070	PWY-2723	trehalose degradation V
RPE_RS23070	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RPE_RS23070	PWY-5661	GDP-glucose biosynthesis
RPE_RS23070	PWY-621	sucrose degradation III (sucrose invertase)
RPE_RS23070	PWY-7238	sucrose biosynthesis II
RPE_RS23070	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPE_RS23075	PWY-3121	linamarin degradation
RPE_RS23075	PWY-5176	coumarin biosynthesis (via 2-coumarate)
RPE_RS23075	PWY-6002	lotaustralin degradation
RPE_RS23075	PWY-6788	cellulose degradation II (fungi)
RPE_RS23075	PWY-7089	taxiphyllin bioactivation
RPE_RS23075	PWY-7091	linustatin bioactivation
RPE_RS23075	PWY-7092	neolinustatin bioactivation
RPE_RS23160	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RPE_RS23160	PWY-6416	quinate degradation II
RPE_RS23160	PWY-6707	gallate biosynthesis
RPE_RS23225	PWY-1881	formate oxidation to CO<sub>2</sub>
RPE_RS23225	PWY-5497	purine nucleobases degradation II (anaerobic)
RPE_RS23225	PWY-6696	oxalate degradation III
RPE_RS23385	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_RS23385	PWY-3162	L-tryptophan degradation V (side chain pathway)
RPE_RS23385	PWY-5057	L-valine degradation II
RPE_RS23385	PWY-5076	L-leucine degradation III
RPE_RS23385	PWY-5078	L-isoleucine degradation II
RPE_RS23385	PWY-5079	L-phenylalanine degradation III
RPE_RS23385	PWY-5082	L-methionine degradation III
RPE_RS23385	PWY-5480	pyruvate fermentation to ethanol I
RPE_RS23385	PWY-5486	pyruvate fermentation to ethanol II
RPE_RS23385	PWY-5751	phenylethanol biosynthesis
RPE_RS23385	PWY-6313	serotonin degradation
RPE_RS23385	PWY-6333	acetaldehyde biosynthesis I
RPE_RS23385	PWY-6342	noradrenaline and adrenaline degradation
RPE_RS23385	PWY-6454	vancomycin resistance I
RPE_RS23385	PWY-6587	pyruvate fermentation to ethanol III
RPE_RS23385	PWY-6802	salidroside biosynthesis
RPE_RS23385	PWY-6871	3-methylbutanol biosynthesis
RPE_RS23385	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS23385	PWY-7013	L-1,2-propanediol degradation
RPE_RS23385	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RPE_RS23385	PWY-7118	chitin degradation to ethanol
RPE_RS23385	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RPE_RS23390	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_RS23395	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
RPE_RS23575	PWY-2301	<i>myo</i>-inositol biosynthesis
RPE_RS23575	PWY-4702	phytate degradation I
RPE_RS23575	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
RPE_RS23585	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RPE_RS23585	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RPE_RS23585	PWY-6897	thiamin salvage II
RPE_RS23585	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RPE_RS23585	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RPE_RS23585	PWY-7356	thiamin salvage IV (yeast)
RPE_RS23585	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RPE_RS23590	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS23590	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_RS23590	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS23590	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RPE_RS23590	PWY-7385	1,3-propanediol biosynthesis (engineered)
RPE_RS23605	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS23605	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS23605	PWY-6886	1-butanol autotrophic biosynthesis
RPE_RS23605	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS23605	PWY-7003	glycerol degradation to butanol
RPE_RS23620	PWY-1042	glycolysis IV (plant cytosol)
RPE_RS23620	PWY-5484	glycolysis II (from fructose 6-phosphate)
RPE_RS23620	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS23620	PWY-7003	glycerol degradation to butanol
RPE_RS23625	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RPE_RS23625	PWY-5723	Rubisco shunt
RPE_RS23625	PWY-6891	thiazole biosynthesis II (Bacillus)
RPE_RS23625	PWY-6892	thiazole biosynthesis I (E. coli)
RPE_RS23625	PWY-6901	superpathway of glucose and xylose degradation
RPE_RS23625	PWY-7560	methylerythritol phosphate pathway II
RPE_RS23690	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RPE_RS23690	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RPE_RS23690	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RPE_RS23690	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RPE_RS23690	PWY-6978	plastoquinol-9 biosynthesis II
RPE_RS23740	PWY-3781	aerobic respiration I (cytochrome c)
RPE_RS23740	PWY-4521	arsenite oxidation I (respiratory)
RPE_RS23740	PWY-6692	Fe(II) oxidation
RPE_RS23740	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RPE_RS23920	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RPE_RS23920	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
RPE_RS24060	PWY-5381	pyridine nucleotide cycling (plants)
RPE_RS24095	PWY-5686	UMP biosynthesis
RPE_RS24110	PWY-5941	glycogen degradation II (eukaryotic)
RPE_RS24110	PWY-6731	starch degradation III
RPE_RS24110	PWY-6737	starch degradation V
RPE_RS24110	PWY-7238	sucrose biosynthesis II
RPE_RS24180	PWY-2941	L-lysine biosynthesis II
RPE_RS24180	PWY-2942	L-lysine biosynthesis III
RPE_RS24180	PWY-5097	L-lysine biosynthesis VI
RPE_RS24190	PWY-4983	L-citrulline-nitric oxide cycle
RPE_RS24190	PWY-4984	urea cycle
RPE_RS24190	PWY-5	canavanine biosynthesis
RPE_RS24190	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RPE_RS24190	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_RS24215	PWY-1361	benzoyl-CoA degradation I (aerobic)
RPE_RS24215	PWY-5109	2-methylbutanoate biosynthesis
RPE_RS24215	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RPE_RS24215	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RPE_RS24215	PWY-5177	glutaryl-CoA degradation
RPE_RS24215	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RPE_RS24215	PWY-6435	4-hydroxybenzoate biosynthesis V
RPE_RS24215	PWY-6583	pyruvate fermentation to butanol I
RPE_RS24215	PWY-6863	pyruvate fermentation to hexanol
RPE_RS24215	PWY-6883	pyruvate fermentation to butanol II
RPE_RS24215	PWY-6944	androstenedione degradation
RPE_RS24215	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RPE_RS24215	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RPE_RS24215	PWY-7007	methyl ketone biosynthesis
RPE_RS24215	PWY-7046	4-coumarate degradation (anaerobic)
RPE_RS24215	PWY-7094	fatty acid salvage
RPE_RS24215	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RPE_RS24215	PWY-735	jasmonic acid biosynthesis
RPE_RS24215	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RPE_RS24215	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RPE_RS24215	PWY-7726	RPE_RS24215
RPE_RS24230	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
RPE_RS24230	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
RPE_RS24230	PWY-6268	adenosylcobalamin salvage from cobalamin
RPE_RS24230	PWY-6269	adenosylcobalamin salvage from cobinamide II
RPE_RS24370	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RPE_RS24405	PWY-4981	L-proline biosynthesis II (from arginine)
RPE_RS24405	PWY-4984	urea cycle
RPE_RS24405	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RPE_RS24520	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
RPE_RS24520	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
