RPE_RS00005 PF00308 Bacterial dnaA protein RPE_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RPE_RS00005 PF11638 DnaA N-terminal domain RPE_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RPE_RS00010 PF02767 DNA polymerase III beta subunit, central domain RPE_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RPE_RS00015 PF02463 RecF/RecN/SMC N terminal domain RPE_RS00020 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RPE_RS00025 PF00204 DNA gyrase B RPE_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus RPE_RS00025 PF01751 Toprim domain RPE_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS00030 PF07536 RPE_RS00030 RPE_RS00030 PF13493 Domain of unknown function (DUF4118) RPE_RS00040 PF01037 AsnC family RPE_RS00040 PF13404 AsnC-type helix-turn-helix domain RPE_RS00050 PF03597 RPE_RS00050 RPE_RS00055 PF00122 E1-E2 ATPase RPE_RS00055 PF00403 Heavy-metal-associated domain RPE_RS00055 PF00702 haloacid dehalogenase-like hydrolase RPE_RS00060 PF05751 RPE_RS00060 RPE_RS00065 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RPE_RS00065 PF12801 RPE_RS00065 RPE_RS00065 PF13746 4Fe-4S dicluster domain RPE_RS00070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPE_RS00070 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RPE_RS00075 PF05545 RPE_RS00075 RPE_RS00080 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO RPE_RS00085 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPE_RS00090 PF02558 Ketopantoate reductase PanE/ApbA RPE_RS00090 PF08546 Ketopantoate reductase PanE/ApbA C terminal RPE_RS00095 PF00106 short chain dehydrogenase RPE_RS00100 PF01323 DSBA-like thioredoxin domain RPE_RS00105 PF00043 Glutathione S-transferase, C-terminal domain RPE_RS00105 PF02798 Glutathione S-transferase, N-terminal domain RPE_RS00110 PF00106 short chain dehydrogenase RPE_RS00115 PF01019 Gamma-glutamyltranspeptidase RPE_RS00120 PF11700 RPE_RS00120 RPE_RS00125 PF01808 AICARFT/IMPCHase bienzyme RPE_RS00125 PF02142 MGS-like domain RPE_RS00130 PF07940 Heparinase II/III-like protein RPE_RS00135 PF01029 NusB family RPE_RS00135 PF01189 NOL1/NOP2/sun family RPE_RS00140 PF07896 Protein of unknown function (DUF1674) RPE_RS00145 PF08808 RPE_RS00145 RPE_RS00150 PF09722 RPE_RS00150 RPE_RS00155 PF00565 Staphylococcal nuclease homologue RPE_RS00160 PF00245 Alkaline phosphatase RPE_RS00165 PF00764 Arginosuccinate synthase RPE_RS00170 PF01569 PAP2 superfamily RPE_RS00180 PF13023 HD domain RPE_RS00185 PF04055 Radical SAM superfamily RPE_RS00195 PF00107 Zinc-binding dehydrogenase RPE_RS00195 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS00200 PF01593 Flavin containing amine oxidoreductase RPE_RS00205 PF00583 Acetyltransferase (GNAT) family RPE_RS00210 PF00719 Inorganic pyrophosphatase RPE_RS00215 PF01546 Peptidase family M20/M25/M40 RPE_RS00215 PF07687 Peptidase dimerisation domain RPE_RS00220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS00220 PF00672 HAMP domain RPE_RS00225 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RPE_RS00225 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RPE_RS00230 PF02594 Uncharacterised ACR, YggU family COG1872 RPE_RS00235 PF02325 RPE_RS00235 RPE_RS00255 PF12680 SnoaL-like domain RPE_RS00260 PF00117 Glutamine amidotransferase class-I RPE_RS00265 PF00106 short chain dehydrogenase RPE_RS00270 PF05099 Tellurite resistance protein TerB RPE_RS00275 PF00211 Adenylate and Guanylate cyclase catalytic domain RPE_RS00280 PF00067 Cytochrome P450 RPE_RS00285 PF05977 Transmembrane secretion effector RPE_RS00295 PF11784 RPE_RS00295 RPE_RS00295 PF13086 AAA domain RPE_RS00295 PF13087 AAA domain RPE_RS00295 PF13195 RPE_RS00295 RPE_RS00295 PF13245 Part of AAA domain RPE_RS00300 PF07007 Protein of unknown function (DUF1311) RPE_RS00310 PF07219 RPE_RS00310 RPE_RS00320 PF02602 Uroporphyrinogen-III synthase HemD RPE_RS00325 PF00814 Glycoprotease family RPE_RS00330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RPE_RS00330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RPE_RS00335 PF01878 EVE domain RPE_RS00340 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RPE_RS00345 PF00501 AMP-binding enzyme RPE_RS00345 PF13193 AMP-binding enzyme C-terminal domain RPE_RS00345 PF16177 RPE_RS00345 RPE_RS00355 PF13649 Methyltransferase domain RPE_RS00365 PF03061 Thioesterase superfamily RPE_RS00370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS00370 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS00370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS00375 PF01161 Phosphatidylethanolamine-binding protein RPE_RS00395 PF02543 Carbamoyltransferase RPE_RS00395 PF16861 RPE_RS00395 RPE_RS00405 PF14518 Iron-containing redox enzyme RPE_RS00410 PF00067 Cytochrome P450 RPE_RS00415 PF05050 Methyltransferase FkbM domain RPE_RS00420 PF00565 Staphylococcal nuclease homologue RPE_RS00425 PF01841 Transglutaminase-like superfamily RPE_RS00425 PF08379 RPE_RS00425 RPE_RS00430 PF04168 RPE_RS00430 RPE_RS00430 PF14403 RPE_RS00430 RPE_RS00435 PF01841 Transglutaminase-like superfamily RPE_RS00435 PF08379 RPE_RS00435 RPE_RS00435 PF09899 RPE_RS00435 RPE_RS00445 PF00563 EAL domain RPE_RS00445 PF00990 GGDEF domain RPE_RS00445 PF12860 RPE_RS00445 RPE_RS00445 PF13188 PAS domain RPE_RS00450 PF03411 Penicillin-insensitive murein endopeptidase RPE_RS00460 PF00999 Sodium/hydrogen exchanger family RPE_RS00460 PF03471 Transporter associated domain RPE_RS00470 PF00557 Metallopeptidase family M24 RPE_RS00480 PF03480 Bacterial extracellular solute-binding protein, family 7 RPE_RS00485 PF04290 RPE_RS00485 RPE_RS00490 PF06808 RPE_RS00490 RPE_RS00495 PF08241 Methyltransferase domain RPE_RS00500 PF02735 Ku70/Ku80 beta-barrel domain RPE_RS00510 PF04002 RadC-like JAB domain RPE_RS00515 PF02974 Protease inhibitor Inh RPE_RS00520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPE_RS00520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPE_RS00525 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS00530 PF00005 ABC transporter RPE_RS00535 PF09084 NMT1/THI5 like RPE_RS00540 PF02633 Creatinine amidohydrolase RPE_RS00550 PF01645 Conserved region in glutamate synthase RPE_RS00560 PF02875 Mur ligase family, glutamate ligase domain RPE_RS00560 PF08245 Mur ligase middle domain RPE_RS00565 PF00107 Zinc-binding dehydrogenase RPE_RS00565 PF16884 RPE_RS00565 RPE_RS00575 PF07719 Tetratricopeptide repeat RPE_RS00575 PF13181 Tetratricopeptide repeat RPE_RS00575 PF13414 TPR repeat RPE_RS00575 PF13424 Tetratricopeptide repeat RPE_RS00575 PF13432 Tetratricopeptide repeat RPE_RS00575 PF13649 Methyltransferase domain RPE_RS00580 PF06078 Bacterial protein of unknown function (DUF937) RPE_RS00585 PF04226 RPE_RS00585 RPE_RS00590 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS00595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS00595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS00600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS00600 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS00600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS00605 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS00610 PF00565 Staphylococcal nuclease homologue RPE_RS00615 PF01435 Peptidase family M48 RPE_RS00620 PF02559 CarD-like/TRCF domain RPE_RS00630 PF00037 4Fe-4S binding domain RPE_RS00630 PF11953 Domain of unknown function (DUF3470) RPE_RS00635 PF01479 S4 domain RPE_RS00640 PF00271 Helicase conserved C-terminal domain RPE_RS00645 PF11306 Protein of unknown function (DUF3108) RPE_RS00650 PF00830 Ribosomal L28 family RPE_RS00655 PF00072 Response regulator receiver domain RPE_RS00655 PF00672 HAMP domain RPE_RS00655 PF00989 PAS fold RPE_RS00655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS00655 PF08448 PAS fold RPE_RS00660 PF13449 Esterase-like activity of phytase RPE_RS00665 PF06213 RPE_RS00665 RPE_RS00665 PF11775 RPE_RS00665 RPE_RS00670 PF01724 Domain of unknown function DUF29 RPE_RS00675 PF01724 Domain of unknown function DUF29 RPE_RS00680 PF07728 AAA domain (dynein-related subfamily) RPE_RS00680 PF08406 RPE_RS00680 RPE_RS00680 PF12556 RPE_RS00680 RPE_RS00685 PF09335 RPE_RS00685 RPE_RS00690 PF00226 DnaJ domain RPE_RS00695 PF01722 BolA-like protein RPE_RS00705 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RPE_RS00710 PF00589 Phage integrase family RPE_RS00710 PF02899 Phage integrase, N-terminal SAM-like domain RPE_RS00720 PF01202 Shikimate kinase RPE_RS00725 PF01761 3-dehydroquinate synthase RPE_RS00730 PF00571 CBS domain RPE_RS00730 PF01595 RPE_RS00730 RPE_RS00730 PF03471 Transporter associated domain RPE_RS00735 PF01043 SecA preprotein cross-linking domain RPE_RS00735 PF02810 SEC-C motif RPE_RS00735 PF07516 SecA Wing and Scaffold domain RPE_RS00735 PF07517 SecA DEAD-like domain RPE_RS00740 PF13616 PPIC-type PPIASE domain RPE_RS00745 PF01960 ArgJ family RPE_RS00750 PF00293 NUDIX domain RPE_RS00755 PF08241 Methyltransferase domain RPE_RS00765 PF00156 Phosphoribosyl transferase domain RPE_RS00770 PF00462 Glutaredoxin RPE_RS00775 PF00795 Carbon-nitrogen hydrolase RPE_RS00780 PF06676 RPE_RS00780 RPE_RS00785 PF00892 EamA-like transporter family RPE_RS00790 PF13489 Methyltransferase domain RPE_RS00795 PF00696 Amino acid kinase family RPE_RS00795 PF01842 ACT domain RPE_RS00795 PF13840 ACT domain RPE_RS00800 PF00391 PEP-utilising enzyme, mobile domain RPE_RS00800 PF01590 GAF domain RPE_RS00800 PF02896 PEP-utilising enzyme, TIM barrel domain RPE_RS00800 PF05524 PEP-utilising enzyme, N-terminal RPE_RS00805 PF00472 RF-1 domain RPE_RS00805 PF03462 PCRF domain RPE_RS00810 PF13847 Methyltransferase domain RPE_RS00815 PF13763 RPE_RS00815 RPE_RS00820 PF08241 Methyltransferase domain RPE_RS00825 PF00753 Metallo-beta-lactamase superfamily RPE_RS00825 PF16123 RPE_RS00825 RPE_RS00830 PF06172 Cupin superfamily (DUF985) RPE_RS00835 PF00892 EamA-like transporter family RPE_RS00840 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS00845 PF00108 Thiolase, N-terminal domain RPE_RS00845 PF02803 Thiolase, C-terminal domain RPE_RS00850 PF05233 RPE_RS00850 RPE_RS00850 PF07879 RPE_RS00850 RPE_RS00860 PF00563 EAL domain RPE_RS00860 PF00990 GGDEF domain RPE_RS00875 PF01783 Ribosomal L32p protein family RPE_RS00880 PF00912 Transglycosylase RPE_RS00885 PF00348 Polyprenyl synthetase RPE_RS00890 PF07077 RPE_RS00890 RPE_RS00900 PF04940 Sensors of blue-light using FAD RPE_RS00905 PF00563 EAL domain RPE_RS00905 PF00990 GGDEF domain RPE_RS00910 PF00999 Sodium/hydrogen exchanger family RPE_RS00920 PF05016 Plasmid stabilisation system protein RPE_RS00925 PF04551 GcpE protein RPE_RS00940 PF00892 EamA-like transporter family RPE_RS00945 PF01475 Ferric uptake regulator family RPE_RS00950 PF01047 MarR family RPE_RS00955 PF00529 HlyD family secretion protein RPE_RS00955 PF13533 Biotin-lipoyl like RPE_RS00955 PF16576 RPE_RS00955 RPE_RS00960 PF07690 Major Facilitator Superfamily RPE_RS00965 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RPE_RS00965 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RPE_RS00970 PF00013 KH domain RPE_RS00970 PF00575 S1 RNA binding domain RPE_RS00970 PF01138 3' exoribonuclease family, domain 1 RPE_RS00970 PF03725 3' exoribonuclease family, domain 2 RPE_RS00970 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RPE_RS00975 PF00312 Ribosomal protein S15 RPE_RS00980 PF01509 TruB family pseudouridylate synthase (N terminal domain) RPE_RS00980 PF09157 Pseudouridine synthase II TruB, C-terminal RPE_RS00980 PF16198 RPE_RS00980 RPE_RS00985 PF02033 Ribosome-binding factor A RPE_RS00990 PF00009 Elongation factor Tu GTP binding domain RPE_RS00990 PF03144 Elongation factor Tu domain 2 RPE_RS00990 PF04760 Translation initiation factor IF-2, N-terminal region RPE_RS00990 PF08364 RPE_RS00990 RPE_RS00990 PF11987 Translation-initiation factor 2 RPE_RS00995 PF04296 Protein of unknown function (DUF448) RPE_RS01000 PF00575 S1 RNA binding domain RPE_RS01000 PF08529 NusA N-terminal domain RPE_RS01000 PF13184 NusA-like KH domain RPE_RS01000 PF14520 Helix-hairpin-helix domain RPE_RS01005 PF02576 Uncharacterised BCR, YhbC family COG0779 RPE_RS01010 PF02390 Putative methyltransferase RPE_RS01015 PF01381 Helix-turn-helix RPE_RS01020 PF00795 Carbon-nitrogen hydrolase RPE_RS01025 PF00571 CBS domain RPE_RS01025 PF03471 Transporter associated domain RPE_RS01030 PF02130 Uncharacterized protein family UPF0054 RPE_RS01035 PF02562 PhoH-like protein RPE_RS01040 PF00919 Uncharacterized protein family UPF0004 RPE_RS01040 PF01938 TRAM domain RPE_RS01040 PF04055 Radical SAM superfamily RPE_RS01045 PF13419 Haloacid dehalogenase-like hydrolase RPE_RS01050 PF01475 Ferric uptake regulator family RPE_RS01055 PF00583 Acetyltransferase (GNAT) family RPE_RS01060 PF00814 Glycoprotease family RPE_RS01065 PF01106 NifU-like domain RPE_RS01065 PF08712 Scaffold protein Nfu/NifU N terminal RPE_RS01070 PF00005 ABC transporter RPE_RS01075 PF00582 Universal stress protein family RPE_RS01090 PF00579 tRNA synthetases class I (W and Y) RPE_RS01095 PF03023 RPE_RS01095 RPE_RS01100 PF00294 pfkB family carbohydrate kinase RPE_RS01110 PF00144 Beta-lactamase RPE_RS01120 PF00171 Aldehyde dehydrogenase family RPE_RS01125 PF02659 RPE_RS01125 RPE_RS01130 PF00905 Penicillin binding protein transpeptidase domain RPE_RS01130 PF00912 Transglycosylase RPE_RS01135 PF01863 Protein of unknown function DUF45 RPE_RS01140 PF06850 RPE_RS01140 RPE_RS01145 PF01061 RPE_RS01145 RPE_RS01150 PF00005 ABC transporter RPE_RS01155 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS01160 PF00072 Response regulator receiver domain RPE_RS01165 PF06319 Protein of unknown function (DUF1052) RPE_RS01170 PF13519 von Willebrand factor type A domain RPE_RS01175 PF00753 Metallo-beta-lactamase superfamily RPE_RS01180 PF06823 RPE_RS01180 RPE_RS01185 PF00072 Response regulator receiver domain RPE_RS01185 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS01185 PF08447 PAS fold RPE_RS01185 PF08448 PAS fold RPE_RS01190 PF10503 Esterase PHB depolymerase RPE_RS01195 PF02417 RPE_RS01195 RPE_RS01200 PF10027 RPE_RS01200 RPE_RS01205 PF13515 RPE_RS01205 RPE_RS01210 PF03972 MmgE/PrpD family RPE_RS01215 PF08448 PAS fold RPE_RS01220 PF01471 Putative peptidoglycan binding domain RPE_RS01220 PF13365 Trypsin-like peptidase domain RPE_RS01225 PF00899 ThiF family RPE_RS01230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPE_RS01230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPE_RS01235 PF06347 Bacterial SH3 domain RPE_RS01240 PF00488 MutS domain V RPE_RS01240 PF01624 MutS domain I RPE_RS01240 PF05188 MutS domain II RPE_RS01240 PF05190 MutS family domain IV RPE_RS01240 PF05192 MutS domain III RPE_RS01250 PF00108 Thiolase, N-terminal domain RPE_RS01250 PF02803 Thiolase, C-terminal domain RPE_RS01255 PF01609 Transposase DDE domain RPE_RS01255 PF13808 RPE_RS01255 RPE_RS01260 PF01609 Transposase DDE domain RPE_RS01260 PF13808 RPE_RS01260 RPE_RS01265 PF00135 Carboxylesterase family RPE_RS01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS01270 PF03466 LysR substrate binding domain RPE_RS01275 PF00141 Peroxidase RPE_RS01280 PF02798 Glutathione S-transferase, N-terminal domain RPE_RS01280 PF13410 Glutathione S-transferase, C-terminal domain RPE_RS01285 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS01290 PF00109 Beta-ketoacyl synthase, N-terminal domain RPE_RS01290 PF02801 Beta-ketoacyl synthase, C-terminal domain RPE_RS01295 PF07977 FabA-like domain RPE_RS01300 PF01475 Ferric uptake regulator family RPE_RS01305 PF02566 OsmC-like protein RPE_RS01310 PF01842 ACT domain RPE_RS01310 PF01909 Nucleotidyltransferase domain RPE_RS01310 PF01966 HD domain RPE_RS01310 PF08335 GlnD PII-uridylyltransferase RPE_RS01315 PF00072 Response regulator receiver domain RPE_RS01315 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS01315 PF00672 HAMP domain RPE_RS01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS01320 PF07045 Protein of unknown function (DUF1330) RPE_RS01325 PF06993 RPE_RS01325 RPE_RS01330 PF13458 Periplasmic binding protein RPE_RS01340 PF00171 Aldehyde dehydrogenase family RPE_RS01345 PF01467 Cytidylyltransferase RPE_RS01350 PF02410 Oligomerisation domain RPE_RS01355 PF02590 Predicted SPOUT methyltransferase RPE_RS01360 PF01551 Peptidase family M23 RPE_RS01365 PF03572 Peptidase family S41 RPE_RS01365 PF13180 PDZ domain RPE_RS01370 PF04748 Divergent polysaccharide deacetylase RPE_RS01375 PF00293 NUDIX domain RPE_RS01385 PF16363 RPE_RS01385 RPE_RS01390 PF00293 NUDIX domain RPE_RS01395 PF00490 Delta-aminolevulinic acid dehydratase RPE_RS01400 PF02311 AraC-like ligand binding domain RPE_RS01400 PF12833 Helix-turn-helix domain RPE_RS01405 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RPE_RS01410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPE_RS01410 PF02874 ATP synthase alpha/beta family, beta-barrel domain RPE_RS01415 PF00231 ATP synthase RPE_RS01420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPE_RS01420 PF00306 ATP synthase alpha/beta chain, C terminal domain RPE_RS01420 PF02874 ATP synthase alpha/beta family, beta-barrel domain RPE_RS01425 PF00213 ATP synthase delta (OSCP) subunit RPE_RS01430 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel RPE_RS01435 PF00270 DEAD/DEAH box helicase RPE_RS01435 PF00271 Helicase conserved C-terminal domain RPE_RS01440 PF00589 Phage integrase family RPE_RS01440 PF02899 Phage integrase, N-terminal SAM-like domain RPE_RS01445 PF14235 RPE_RS01445 RPE_RS01455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPE_RS01455 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS01465 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS01470 PF01124 MAPEG family RPE_RS01475 PF10387 Protein of unknown function (DUF2442) RPE_RS01480 PF13711 RPE_RS01480 RPE_RS01485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPE_RS01485 PF00364 Biotin-requiring enzyme RPE_RS01485 PF02817 e3 binding domain RPE_RS01490 PF00676 Dehydrogenase E1 component RPE_RS01490 PF02779 Transketolase, pyrimidine binding domain RPE_RS01490 PF16078 RPE_RS01490 RPE_RS01490 PF16870 RPE_RS01490 RPE_RS01495 PF00549 CoA-ligase RPE_RS01495 PF02629 CoA binding domain RPE_RS01500 PF00549 CoA-ligase RPE_RS01500 PF08442 ATP-grasp domain RPE_RS01505 PF00056 lactate/malate dehydrogenase, NAD binding domain RPE_RS01505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RPE_RS01510 PF03969 AFG1-like ATPase RPE_RS01515 PF13563 2'-5' RNA ligase superfamily RPE_RS01520 PF13472 GDSL-like Lipase/Acylhydrolase family RPE_RS01525 PF00005 ABC transporter RPE_RS01530 PF02687 RPE_RS01530 RPE_RS01535 PF01027 Inhibitor of apoptosis-promoting Bax1 RPE_RS01540 PF13420 Acetyltransferase (GNAT) domain RPE_RS01545 PF10984 RPE_RS01545 RPE_RS01550 PF06764 Protein of unknown function (DUF1223) RPE_RS01555 PF00330 Aconitase family (aconitate hydratase) RPE_RS01555 PF00694 Aconitase C-terminal domain RPE_RS01560 PF00005 ABC transporter RPE_RS01565 PF03379 RPE_RS01565 RPE_RS01570 PF01578 RPE_RS01570 RPE_RS01575 PF04995 RPE_RS01575 RPE_RS01580 PF08534 Redoxin RPE_RS01585 PF12836 Helix-hairpin-helix motif RPE_RS01590 PF04279 RPE_RS01590 RPE_RS01595 PF00448 SRP54-type protein, GTPase domain RPE_RS01595 PF02881 SRP54-type protein, helical bundle domain RPE_RS01600 PF00849 RNA pseudouridylate synthase RPE_RS01605 PF00919 Uncharacterized protein family UPF0004 RPE_RS01605 PF04055 Radical SAM superfamily RPE_RS01610 PF01678 Diaminopimelate epimerase RPE_RS01615 PF06445 GyrI-like small molecule binding domain RPE_RS01620 PF04402 Protein of unknown function (DUF541) RPE_RS01625 PF12706 Beta-lactamase superfamily domain RPE_RS01630 PF00556 Antenna complex alpha/beta subunit RPE_RS01635 PF00556 Antenna complex alpha/beta subunit RPE_RS01640 PF00448 SRP54-type protein, GTPase domain RPE_RS01640 PF02881 SRP54-type protein, helical bundle domain RPE_RS01640 PF02978 Signal peptide binding domain RPE_RS01645 PF00886 Ribosomal protein S16 RPE_RS01650 PF01782 RimM N-terminal domain RPE_RS01650 PF05239 PRC-barrel domain RPE_RS01655 PF01746 tRNA (Guanine-1)-methyltransferase RPE_RS01660 PF01245 Ribosomal protein L19 RPE_RS01665 PF00330 Aconitase family (aconitate hydratase) RPE_RS01670 PF00009 Elongation factor Tu GTP binding domain RPE_RS01670 PF01583 Adenylylsulphate kinase RPE_RS01675 PF01507 Phosphoadenosine phosphosulfate reductase family RPE_RS01695 PF06262 Possibl zinc metallo-peptidase RPE_RS01700 PF00694 Aconitase C-terminal domain RPE_RS01705 PF03328 HpcH/HpaI aldolase/citrate lyase family RPE_RS01710 PF00484 Carbonic anhydrase RPE_RS01715 PF00300 Histidine phosphatase superfamily (branch 1) RPE_RS01720 PF01113 Dihydrodipicolinate reductase, N-terminus RPE_RS01720 PF05173 Dihydrodipicolinate reductase, C-terminus RPE_RS01725 PF07045 Protein of unknown function (DUF1330) RPE_RS01730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RPE_RS01735 PF03358 NADPH-dependent FMN reductase RPE_RS01740 PF00398 Ribosomal RNA adenine dimethylase RPE_RS01745 PF00226 DnaJ domain RPE_RS01745 PF00684 DnaJ central domain RPE_RS01745 PF01556 DnaJ C terminal domain RPE_RS01750 PF00012 Hsp70 protein RPE_RS01760 PF01025 GrpE RPE_RS01765 PF01628 HrcA protein C terminal domain RPE_RS01770 PF01138 3' exoribonuclease family, domain 1 RPE_RS01770 PF03725 3' exoribonuclease family, domain 2 RPE_RS01775 PF01725 Ham1 family RPE_RS01780 PF04055 Radical SAM superfamily RPE_RS01780 PF06969 HemN C-terminal domain RPE_RS01785 PF13458 Periplasmic binding protein RPE_RS01790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPE_RS01795 PF02021 Uncharacterised protein family UPF0102 RPE_RS01800 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RPE_RS01800 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RPE_RS01805 PF01078 Magnesium chelatase, subunit ChlI RPE_RS01805 PF13335 RPE_RS01805 RPE_RS01805 PF13541 Subunit ChlI of Mg-chelatase RPE_RS01815 PF00072 Response regulator receiver domain RPE_RS01815 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS01820 PF13444 Acetyltransferase (GNAT) domain RPE_RS01825 PF00485 Phosphoribulokinase / Uridine kinase family RPE_RS01830 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RPE_RS01835 PF00977 Histidine biosynthesis protein RPE_RS01840 PF00977 Histidine biosynthesis protein RPE_RS01845 PF00117 Glutamine amidotransferase class-I RPE_RS01850 PF10947 RPE_RS01850 RPE_RS01855 PF00475 Imidazoleglycerol-phosphate dehydratase RPE_RS01860 PF00227 Proteasome subunit RPE_RS01865 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS01865 PF07724 AAA domain (Cdc48 subfamily) RPE_RS01865 PF10431 C-terminal, D2-small domain, of ClpB protein RPE_RS01870 PF01713 Smr domain RPE_RS01875 PF03562 MltA specific insert domain RPE_RS01875 PF06725 3D domain RPE_RS01880 PF04280 Tim44-like domain RPE_RS01885 PF02556 Preprotein translocase subunit SecB RPE_RS01890 PF00929 Exonuclease RPE_RS01895 PF01121 Dephospho-CoA kinase RPE_RS01900 PF02545 Maf-like protein RPE_RS01905 PF03618 RPE_RS01905 RPE_RS01910 PF03653 RPE_RS01910 RPE_RS01915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPE_RS01915 PF07497 Rho termination factor, RNA-binding domain RPE_RS01915 PF07498 Rho termination factor, N-terminal domain RPE_RS01920 PF01926 50S ribosome-binding GTPase RPE_RS01920 PF10396 GTP-binding protein TrmE N-terminus RPE_RS01920 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE RPE_RS01925 PF01134 Glucose inhibited division protein A RPE_RS01925 PF13932 GidA associated domain 3 RPE_RS01930 PF02527 rRNA small subunit methyltransferase G RPE_RS01935 PF13614 AAA domain RPE_RS01940 PF02195 ParB-like nuclease domain RPE_RS01945 PF06144 DNA polymerase III, delta subunit RPE_RS01950 PF04390 Lipopolysaccharide-assembly RPE_RS01955 PF00133 tRNA synthetases class I (I, L, M and V) RPE_RS01955 PF08264 Anticodon-binding domain of tRNA RPE_RS01955 PF09334 tRNA synthetases class I (M) RPE_RS01955 PF13603 Leucyl-tRNA synthetase, Domain 2 RPE_RS01960 PF00672 HAMP domain RPE_RS01960 PF00990 GGDEF domain RPE_RS01965 PF01168 Alanine racemase, N-terminal domain RPE_RS01970 PF03734 L,D-transpeptidase catalytic domain RPE_RS01975 PF00072 Response regulator receiver domain RPE_RS01975 PF00486 Transcriptional regulatory protein, C terminal RPE_RS01980 PF00027 Cyclic nucleotide-binding domain RPE_RS01985 PF03372 Endonuclease/Exonuclease/phosphatase family RPE_RS01990 PF03548 Outer membrane lipoprotein carrier protein LolA RPE_RS01995 PF01580 FtsK/SpoIIIE family RPE_RS01995 PF09397 Ftsk gamma domain RPE_RS01995 PF13491 RPE_RS01995 RPE_RS02000 PF00155 Aminotransferase class I and II RPE_RS02005 PF01934 Protein of unknown function DUF86 RPE_RS02010 PF01909 Nucleotidyltransferase domain RPE_RS02015 PF00909 Ammonium Transporter Family RPE_RS02020 PF00543 Nitrogen regulatory protein P-II RPE_RS02025 PF00909 Ammonium Transporter Family RPE_RS02030 PF00543 Nitrogen regulatory protein P-II RPE_RS02035 PF13622 Thioesterase-like superfamily RPE_RS02040 PF01494 FAD binding domain RPE_RS02045 PF03966 Trm112p-like protein RPE_RS02050 PF02190 ATP-dependent protease La (LON) domain RPE_RS02055 PF00085 Thioredoxin RPE_RS02055 PF14559 Tetratricopeptide repeat RPE_RS02055 PF14561 Tetratricopeptide repeat RPE_RS02065 PF00672 HAMP domain RPE_RS02080 PF00012 Hsp70 protein RPE_RS02085 PF00575 S1 RNA binding domain RPE_RS02085 PF09371 Tex-like protein N-terminal domain RPE_RS02085 PF12836 Helix-hairpin-helix motif RPE_RS02085 PF16921 RPE_RS02085 RPE_RS02090 PF13419 Haloacid dehalogenase-like hydrolase RPE_RS02095 PF12697 Alpha/beta hydrolase family RPE_RS02105 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS02110 PF09967 RPE_RS02110 RPE_RS02110 PF13203 RPE_RS02110 RPE_RS02120 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RPE_RS02120 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain RPE_RS02125 PF01894 Uncharacterised protein family UPF0047 RPE_RS02135 PF00005 ABC transporter RPE_RS02135 PF12848 ABC transporter RPE_RS02140 PF01612 3'-5' exonuclease RPE_RS02145 PF06835 Lipopolysaccharide-assembly, LptC-related RPE_RS02150 PF03968 OstA-like protein RPE_RS02155 PF00005 ABC transporter RPE_RS02155 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS02160 PF00309 RPE_RS02160 RPE_RS02160 PF04552 Sigma-54, DNA binding domain RPE_RS02160 PF04963 Sigma-54 factor, core binding domain RPE_RS02165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RPE_RS02165 PF16321 RPE_RS02165 RPE_RS02170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RPE_RS02175 PF14362 RPE_RS02175 RPE_RS02180 PF06620 RPE_RS02180 RPE_RS02185 PF00011 Hsp20/alpha crystallin family RPE_RS02190 PF00005 ABC transporter RPE_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS02200 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS02205 PF04480 Protein of unknown function (DUF559) RPE_RS02210 PF13416 Bacterial extracellular solute-binding protein RPE_RS02215 PF02515 CoA-transferase family III RPE_RS02225 PF09538 RPE_RS02225 RPE_RS02230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RPE_RS02235 PF04028 RPE_RS02235 RPE_RS02240 PF02224 Cytidylate kinase RPE_RS02255 PF00575 S1 RNA binding domain RPE_RS02260 PF01343 Peptidase family S49 RPE_RS02265 PF00216 Bacterial DNA-binding protein RPE_RS02270 PF06305 RPE_RS02270 RPE_RS02275 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RPE_RS02280 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS02285 PF00290 Tryptophan synthase alpha chain RPE_RS02290 PF01039 Carboxyl transferase domain RPE_RS02295 PF08245 Mur ligase middle domain RPE_RS02300 PF08241 Methyltransferase domain RPE_RS02305 PF00085 Thioredoxin RPE_RS02310 PF00580 UvrD/REP helicase N-terminal domain RPE_RS02310 PF12705 PD-(D/E)XK nuclease superfamily RPE_RS02310 PF13361 UvrD-like helicase C-terminal domain RPE_RS02315 PF12705 PD-(D/E)XK nuclease superfamily RPE_RS02320 PF12804 MobA-like NTP transferase domain RPE_RS02330 PF01636 Phosphotransferase enzyme family RPE_RS02330 PF02367 Uncharacterised P-loop hydrolase UPF0079 RPE_RS02335 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS02335 PF12860 RPE_RS02335 RPE_RS02340 PF00692 dUTPase RPE_RS02345 PF02441 Flavoprotein RPE_RS02345 PF04127 DNA / pantothenate metabolism flavoprotein RPE_RS02350 PF12686 RPE_RS02350 RPE_RS02355 PF03109 RPE_RS02355 RPE_RS02360 PF01209 ubiE/COQ5 methyltransferase family RPE_RS02365 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RPE_RS02365 PF06827 Zinc finger found in FPG and IleRS RPE_RS02365 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RPE_RS02370 PF00501 AMP-binding enzyme RPE_RS02370 PF13193 AMP-binding enzyme C-terminal domain RPE_RS02375 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS02380 PF01202 Shikimate kinase RPE_RS02380 PF13560 Helix-turn-helix domain RPE_RS02385 PF02469 Fasciclin domain RPE_RS02390 PF01292 Prokaryotic cytochrome b561 RPE_RS02395 PF00174 Oxidoreductase molybdopterin binding domain RPE_RS02395 PF10518 TAT (twin-arginine translocation) pathway signal sequence RPE_RS02400 PF06779 RPE_RS02400 RPE_RS02405 PF00180 Isocitrate/isopropylmalate dehydrogenase RPE_RS02410 PF01797 Transposase IS200 like RPE_RS02425 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPE_RS02425 PF02774 Semialdehyde dehydrogenase, dimerisation domain RPE_RS02430 PF03350 RPE_RS02430 RPE_RS02435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPE_RS02435 PF12833 Helix-turn-helix domain RPE_RS02440 PF10003 RPE_RS02440 RPE_RS02445 PF00633 Helix-hairpin-helix motif RPE_RS02445 PF00730 HhH-GPD superfamily base excision DNA repair protein RPE_RS02445 PF10576 Iron-sulfur binding domain of endonuclease III RPE_RS02450 PF07264 Etoposide-induced protein 2 RPE_RS02455 PF05708 Orthopoxvirus protein of unknown function (DUF830) RPE_RS02460 PF01593 Flavin containing amine oxidoreductase RPE_RS02470 PF01588 Putative tRNA binding domain RPE_RS02470 PF03147 Ferredoxin-fold anticodon binding domain RPE_RS02470 PF03483 B3/4 domain RPE_RS02470 PF03484 tRNA synthetase B5 domain RPE_RS02485 PF01409 tRNA synthetases class II core domain (F) RPE_RS02485 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RPE_RS02490 PF00453 Ribosomal protein L20 RPE_RS02495 PF01632 Ribosomal protein L35 RPE_RS02510 PF00707 Translation initiation factor IF-3, C-terminal domain RPE_RS02510 PF05198 Translation initiation factor IF-3, N-terminal domain RPE_RS02515 PF12146 Putative lysophospholipase RPE_RS02520 PF08331 RPE_RS02520 RPE_RS02520 PF13484 RPE_RS02520 RPE_RS02525 PF00043 Glutathione S-transferase, C-terminal domain RPE_RS02525 PF13417 Glutathione S-transferase, N-terminal domain RPE_RS02530 PF02673 RPE_RS02530 RPE_RS02535 PF01370 NAD dependent epimerase/dehydratase family RPE_RS02545 PF03061 Thioesterase superfamily RPE_RS02550 PF03734 L,D-transpeptidase catalytic domain RPE_RS02555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS02560 PF01545 Cation efflux family RPE_RS02565 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RPE_RS02570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RPE_RS02575 PF00890 FAD binding domain RPE_RS02575 PF02910 Fumarate reductase flavoprotein C-term RPE_RS02580 PF13085 2Fe-2S iron-sulfur cluster binding domain RPE_RS02580 PF13534 4Fe-4S dicluster domain RPE_RS02585 PF16242 RPE_RS02585 RPE_RS02605 PF01124 MAPEG family RPE_RS02610 PF07143 Hydroxyneurosporene synthase (CrtC) RPE_RS02610 PF17186 RPE_RS02610 RPE_RS02615 PF02687 RPE_RS02615 RPE_RS02615 PF12704 MacB-like periplasmic core domain RPE_RS02620 PF00005 ABC transporter RPE_RS02645 PF00593 TonB dependent receptor RPE_RS02645 PF07715 TonB-dependent Receptor Plug Domain RPE_RS02650 PF01032 FecCD transport family RPE_RS02655 PF00005 ABC transporter RPE_RS02660 PF01497 Periplasmic binding protein RPE_RS02665 PF06080 RPE_RS02665 RPE_RS02670 PF07690 Major Facilitator Superfamily RPE_RS02675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS02675 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS02675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS02680 PF01548 RPE_RS02680 RPE_RS02680 PF02371 RPE_RS02680 RPE_RS02685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS02685 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS02685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS02690 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPE_RS02695 PF03734 L,D-transpeptidase catalytic domain RPE_RS02700 PF02322 RPE_RS02700 RPE_RS02705 PF01654 RPE_RS02705 RPE_RS02710 PF04542 Sigma-70 region 2 RPE_RS02710 PF08281 Sigma-70, region 4 RPE_RS02715 PF00072 Response regulator receiver domain RPE_RS02715 PF00486 Transcriptional regulatory protein, C terminal RPE_RS02720 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS02720 PF11849 RPE_RS02720 RPE_RS02725 PF00672 HAMP domain RPE_RS02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS02730 PF13416 Bacterial extracellular solute-binding protein RPE_RS02740 PF13458 Periplasmic binding protein RPE_RS02745 PF02678 Pirin RPE_RS02745 PF05726 Pirin C-terminal cupin domain RPE_RS02750 PF01259 SAICAR synthetase RPE_RS02755 PF00696 Amino acid kinase family RPE_RS02755 PF01472 PUA domain RPE_RS02760 PF01018 GTP1/OBG RPE_RS02760 PF01926 50S ribosome-binding GTPase RPE_RS02765 PF00892 EamA-like transporter family RPE_RS02770 PF01226 Formate/nitrite transporter RPE_RS02775 PF13302 Acetyltransferase (GNAT) domain RPE_RS02780 PF01016 Ribosomal L27 protein RPE_RS02785 PF00829 Ribosomal prokaryotic L21 protein RPE_RS02800 PF00589 Phage integrase family RPE_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS02810 PF00176 SNF2 family N-terminal domain RPE_RS02810 PF00271 Helicase conserved C-terminal domain RPE_RS02815 PF01555 DNA methylase RPE_RS02820 PF04851 Type III restriction enzyme, res subunit RPE_RS02870 PF00144 Beta-lactamase RPE_RS02890 PF02540 NAD synthase RPE_RS02895 PF00501 AMP-binding enzyme RPE_RS02895 PF13193 AMP-binding enzyme C-terminal domain RPE_RS02900 PF00550 Phosphopantetheine attachment site RPE_RS02905 PF00733 Asparagine synthase RPE_RS02905 PF13537 Glutamine amidotransferase domain RPE_RS02920 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS02925 PF12697 Alpha/beta hydrolase family RPE_RS02930 PF00107 Zinc-binding dehydrogenase RPE_RS02930 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS02935 PF00027 Cyclic nucleotide-binding domain RPE_RS02935 PF13545 Crp-like helix-turn-helix domain RPE_RS02940 PF00941 FAD binding domain in molybdopterin dehydrogenase RPE_RS02940 PF03450 CO dehydrogenase flavoprotein C-terminal domain RPE_RS02945 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS02945 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPE_RS02950 PF00111 2Fe-2S iron-sulfur cluster binding domain RPE_RS02950 PF01799 [2Fe-2S] binding domain RPE_RS02955 PF00501 AMP-binding enzyme RPE_RS02955 PF13193 AMP-binding enzyme C-terminal domain RPE_RS02960 PF13458 Periplasmic binding protein RPE_RS02965 PF02653 RPE_RS02965 RPE_RS02970 PF00005 ABC transporter RPE_RS02970 PF02653 RPE_RS02970 RPE_RS02970 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS02975 PF00005 ABC transporter RPE_RS02980 PF00583 Acetyltransferase (GNAT) family RPE_RS02985 PF00583 Acetyltransferase (GNAT) family RPE_RS02990 PF02082 Transcriptional regulator RPE_RS02995 PF02915 Rubrerythrin RPE_RS03000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS03005 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RPE_RS03005 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RPE_RS03005 PF17147 RPE_RS03005 RPE_RS03010 PF00037 4Fe-4S binding domain RPE_RS03015 PF00501 AMP-binding enzyme RPE_RS03015 PF13193 AMP-binding enzyme C-terminal domain RPE_RS03020 PF01869 BadF/BadG/BcrA/BcrD ATPase family RPE_RS03025 PF01869 BadF/BadG/BcrA/BcrD ATPase family RPE_RS03030 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component RPE_RS03035 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component RPE_RS03040 PF00107 Zinc-binding dehydrogenase RPE_RS03040 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS03045 PF12802 MarR family RPE_RS03050 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS03055 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS03060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS03060 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS03060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS03065 PF00501 AMP-binding enzyme RPE_RS03065 PF13193 AMP-binding enzyme C-terminal domain RPE_RS03070 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS03075 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RPE_RS03085 PF00092 von Willebrand factor type A domain RPE_RS03090 PF01548 RPE_RS03090 RPE_RS03090 PF02371 RPE_RS03090 RPE_RS03095 PF07728 AAA domain (dynein-related subfamily) RPE_RS03095 PF08406 RPE_RS03095 RPE_RS03100 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPE_RS03105 PF00034 Cytochrome c RPE_RS03110 PF03626 RPE_RS03110 RPE_RS03115 PF00510 Cytochrome c oxidase subunit III RPE_RS03125 PF00556 Antenna complex alpha/beta subunit RPE_RS03130 PF00556 Antenna complex alpha/beta subunit RPE_RS03135 PF00556 Antenna complex alpha/beta subunit RPE_RS03140 PF00556 Antenna complex alpha/beta subunit RPE_RS03145 PF00072 Response regulator receiver domain RPE_RS03145 PF00196 Bacterial regulatory proteins, luxR family RPE_RS03150 PF00360 Phytochrome region RPE_RS03150 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS03150 PF01590 GAF domain RPE_RS03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS03150 PF08446 PAS fold RPE_RS03155 PF00360 Phytochrome region RPE_RS03155 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS03155 PF01590 GAF domain RPE_RS03155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS03155 PF08446 PAS fold RPE_RS03160 PF00072 Response regulator receiver domain RPE_RS03165 PF00072 Response regulator receiver domain RPE_RS03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS03165 PF07730 Histidine kinase RPE_RS03170 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RPE_RS03170 PF00364 Biotin-requiring enzyme RPE_RS03170 PF00682 HMGL-like RPE_RS03170 PF02436 Conserved carboxylase domain RPE_RS03170 PF02785 Biotin carboxylase C-terminal domain RPE_RS03170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPE_RS03175 PF00478 IMP dehydrogenase / GMP reductase domain RPE_RS03185 PF04055 Radical SAM superfamily RPE_RS03185 PF08497 RPE_RS03185 RPE_RS03185 PF11842 RPE_RS03185 RPE_RS03190 PF10116 RPE_RS03190 RPE_RS03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS03215 PF00825 Ribonuclease P RPE_RS03220 PF02096 60Kd inner membrane protein RPE_RS03220 PF14849 YidC periplasmic domain RPE_RS03225 PF01926 50S ribosome-binding GTPase RPE_RS03230 PF04241 RPE_RS03230 RPE_RS03235 PF00696 Amino acid kinase family RPE_RS03240 PF06282 RPE_RS03240 RPE_RS03245 PF13419 Haloacid dehalogenase-like hydrolase RPE_RS03250 PF01541 GIY-YIG catalytic domain RPE_RS03255 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS03255 PF14602 Hexapeptide repeat of succinyl-transferase RPE_RS03255 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RPE_RS03260 PF05656 RPE_RS03260 RPE_RS03265 PF01546 Peptidase family M20/M25/M40 RPE_RS03265 PF07687 Peptidase dimerisation domain RPE_RS03270 PF01416 tRNA pseudouridine synthase RPE_RS03275 PF00551 Formyl transferase RPE_RS03275 PF02911 Formyl transferase, C-terminal domain RPE_RS03280 PF01327 Polypeptide deformylase RPE_RS03285 PF02646 RPE_RS03285 RPE_RS03290 PF02353 Mycolic acid cyclopropane synthetase RPE_RS03295 PF06966 RPE_RS03295 RPE_RS03305 PF00691 OmpA family RPE_RS03310 PF13673 Acetyltransferase (GNAT) domain RPE_RS03320 PF00005 ABC transporter RPE_RS03320 PF00664 ABC transporter transmembrane region RPE_RS03325 PF01197 Ribosomal protein L31 RPE_RS03330 PF07323 Protein of unknown function (DUF1465) RPE_RS03335 PF06698 RPE_RS03335 RPE_RS03340 PF00107 Zinc-binding dehydrogenase RPE_RS03340 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS03345 PF00563 EAL domain RPE_RS03345 PF00990 GGDEF domain RPE_RS03345 PF07696 7TMR-DISM extracellular 2 RPE_RS03345 PF08447 PAS fold RPE_RS03350 PF03551 Transcriptional regulator PadR-like family RPE_RS03350 PF10400 Virulence activator alpha C-term RPE_RS03355 PF12680 SnoaL-like domain RPE_RS03360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS03360 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS03360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS03360 PF12418 RPE_RS03360 RPE_RS03360 PF12806 RPE_RS03360 RPE_RS03365 PF00108 Thiolase, N-terminal domain RPE_RS03365 PF02803 Thiolase, C-terminal domain RPE_RS03370 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS03370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPE_RS03370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPE_RS03375 PF02798 Glutathione S-transferase, N-terminal domain RPE_RS03375 PF14497 Glutathione S-transferase, C-terminal domain RPE_RS03380 PF12802 MarR family RPE_RS03385 PF04107 Glutamate-cysteine ligase family 2(GCS2) RPE_RS03390 PF14295 PAN domain RPE_RS03395 PF13683 RPE_RS03395 RPE_RS03410 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS03410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RPE_RS03415 PF00310 Glutamine amidotransferases class-II RPE_RS03415 PF01493 GXGXG motif RPE_RS03415 PF01645 Conserved region in glutamate synthase RPE_RS03415 PF04898 Glutamate synthase central domain RPE_RS03425 PF00011 Hsp20/alpha crystallin family RPE_RS03430 PF12146 Putative lysophospholipase RPE_RS03435 PF00483 Nucleotidyl transferase RPE_RS03440 PF00990 GGDEF domain RPE_RS03440 PF02743 Cache domain RPE_RS03470 PF10082 RPE_RS03470 RPE_RS03475 PF00571 CBS domain RPE_RS03475 PF01380 SIS domain RPE_RS03480 PF07690 Major Facilitator Superfamily RPE_RS03485 PF04311 RPE_RS03485 RPE_RS03490 PF02661 Fic/DOC family RPE_RS03500 PF01471 Putative peptidoglycan binding domain RPE_RS03500 PF13406 Transglycosylase SLT domain RPE_RS03505 PF01810 RPE_RS03505 RPE_RS03510 PF01925 RPE_RS03510 RPE_RS03515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPE_RS03520 PF00440 Bacterial regulatory proteins, tetR family RPE_RS03525 PF00459 Inositol monophosphatase family RPE_RS03530 PF05013 N-formylglutamate amidohydrolase RPE_RS03535 PF00072 Response regulator receiver domain RPE_RS03550 PF03358 NADPH-dependent FMN reductase RPE_RS03555 PF02678 Pirin RPE_RS03560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS03560 PF03466 LysR substrate binding domain RPE_RS03565 PF11412 Disulphide bond corrector protein DsbC RPE_RS03570 PF02622 Uncharacterized ACR, COG1678 RPE_RS03575 PF08238 Sel1 repeat RPE_RS03580 PF01925 RPE_RS03580 RPE_RS03585 PF09608 RPE_RS03585 RPE_RS03590 PF00194 Eukaryotic-type carbonic anhydrase RPE_RS03595 PF00717 Peptidase S24-like RPE_RS03600 PF06108 Protein of unknown function (DUF952) RPE_RS03605 PF01180 Dihydroorotate dehydrogenase RPE_RS03610 PF12706 Beta-lactamase superfamily domain RPE_RS03615 PF01554 MatE RPE_RS03625 PF01068 ATP dependent DNA ligase domain RPE_RS03625 PF04679 ATP dependent DNA ligase C terminal region RPE_RS03635 PF08241 Methyltransferase domain RPE_RS03640 PF13505 Outer membrane protein beta-barrel domain RPE_RS03650 PF13458 Periplasmic binding protein RPE_RS03655 PF00270 DEAD/DEAH box helicase RPE_RS03655 PF00271 Helicase conserved C-terminal domain RPE_RS03655 PF08494 RPE_RS03655 RPE_RS03660 PF00149 Calcineurin-like phosphoesterase RPE_RS03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS03665 PF03466 LysR substrate binding domain RPE_RS03670 PF00892 EamA-like transporter family RPE_RS03675 PF12706 Beta-lactamase superfamily domain RPE_RS03680 PF14373 RPE_RS03680 RPE_RS03685 PF01921 tRNA synthetases class I (K) RPE_RS03690 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPE_RS03695 PF13641 Glycosyltransferase like family 2 RPE_RS03700 PF02630 SCO1/SenC RPE_RS03715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RPE_RS03715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RPE_RS03725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS03725 PF03466 LysR substrate binding domain RPE_RS03730 PF04303 PrpF protein RPE_RS03735 PF04909 Amidohydrolase RPE_RS03740 PF03737 Demethylmenaquinone methyltransferase RPE_RS03745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPE_RS03745 PF09130 Domain of unknown function (DUF1932) RPE_RS03750 PF04909 Amidohydrolase RPE_RS03755 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit RPE_RS03760 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RPE_RS03765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPE_RS03775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RPE_RS03780 PF09335 RPE_RS03780 RPE_RS03790 PF03060 Nitronate monooxygenase RPE_RS03795 PF13622 Thioesterase-like superfamily RPE_RS03810 PF00082 Subtilase family RPE_RS03815 PF00005 ABC transporter RPE_RS03815 PF03459 TOBE domain RPE_RS03820 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS03825 PF13531 Bacterial extracellular solute-binding protein RPE_RS03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS03830 PF03459 TOBE domain RPE_RS03835 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RPE_RS03835 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RPE_RS03835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS03835 PF12837 4Fe-4S binding domain RPE_RS03835 PF17147 RPE_RS03835 RPE_RS03840 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS03840 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B RPE_RS03840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RPE_RS03845 PF01391 Collagen triple helix repeat (20 copies) RPE_RS03850 PF00294 pfkB family carbohydrate kinase RPE_RS03855 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS03860 PF07859 alpha/beta hydrolase fold RPE_RS03860 PF13738 Pyridine nucleotide-disulphide oxidoreductase RPE_RS03890 PF00669 Bacterial flagellin N-terminal helical region RPE_RS03895 PF00460 Flagella basal body rod protein RPE_RS03895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS03910 PF00460 Flagella basal body rod protein RPE_RS03910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS03910 PF07559 Flagellar basal body protein FlaE RPE_RS03915 PF03963 RPE_RS03915 RPE_RS03915 PF13860 FlgD Ig-like domain RPE_RS03915 PF13861 FlgD Tudor-like domain RPE_RS03925 PF02561 Flagellar protein FliS RPE_RS03930 PF02465 RPE_RS03930 RPE_RS03930 PF07195 RPE_RS03930 RPE_RS03930 PF07196 Flagellin hook IN motif RPE_RS03935 PF00669 Bacterial flagellin N-terminal helical region RPE_RS03935 PF00700 Bacterial flagellin C-terminal helical region RPE_RS03940 PF04542 Sigma-70 region 2 RPE_RS03940 PF08281 Sigma-70, region 4 RPE_RS03955 PF02600 Disulfide bond formation protein DsbB RPE_RS03965 PF03788 RPE_RS03965 RPE_RS03970 PF04172 RPE_RS03970 RPE_RS03975 PF13462 Thioredoxin RPE_RS03990 PF01594 RPE_RS03990 RPE_RS03995 PF12973 ChrR Cupin-like domain RPE_RS04000 PF04542 Sigma-70 region 2 RPE_RS04000 PF04545 Sigma-70, region 4 RPE_RS04005 PF01227 GTP cyclohydrolase I RPE_RS04010 PF03600 Citrate transporter RPE_RS04020 PF14279 RPE_RS04020 RPE_RS04025 PF00534 Glycosyl transferases group 1 RPE_RS04025 PF08323 Starch synthase catalytic domain RPE_RS04030 PF00483 Nucleotidyl transferase RPE_RS04035 PF00571 CBS domain RPE_RS04040 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RPE_RS04040 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RPE_RS04045 PF00561 alpha/beta hydrolase fold RPE_RS04050 PF00534 Glycosyl transferases group 1 RPE_RS04050 PF13439 Glycosyltransferase Family 4 RPE_RS04055 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS04055 PF02706 Chain length determinant protein RPE_RS04060 PF00534 Glycosyl transferases group 1 RPE_RS04060 PF13439 Glycosyltransferase Family 4 RPE_RS04065 PF01522 Polysaccharide deacetylase RPE_RS04070 PF00534 Glycosyl transferases group 1 RPE_RS04070 PF13439 Glycosyltransferase Family 4 RPE_RS04075 PF13489 Methyltransferase domain RPE_RS04080 PF13440 RPE_RS04080 RPE_RS04085 PF00534 Glycosyl transferases group 1 RPE_RS04085 PF13439 Glycosyltransferase Family 4 RPE_RS04110 PF00849 RNA pseudouridylate synthase RPE_RS04110 PF01479 S4 domain RPE_RS04115 PF00140 Sigma-70 factor, region 1 RPE_RS04115 PF04542 Sigma-70 region 2 RPE_RS04115 PF04545 Sigma-70, region 4 RPE_RS04120 PF01293 Phosphoenolpyruvate carboxykinase RPE_RS04125 PF10615 Protein of unknown function (DUF2470) RPE_RS04125 PF13883 Pyridoxamine 5'-phosphate oxidase RPE_RS04130 PF00072 Response regulator receiver domain RPE_RS04130 PF00486 Transcriptional regulatory protein, C terminal RPE_RS04135 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS04135 PF00672 HAMP domain RPE_RS04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS04135 PF13755 RPE_RS04135 RPE_RS04135 PF13756 RPE_RS04135 RPE_RS04140 PF07475 HPr Serine kinase C-terminal domain RPE_RS04145 PF03610 PTS system fructose IIA component RPE_RS04150 PF00381 PTS HPr component phosphorylation site RPE_RS04155 PF13231 RPE_RS04155 RPE_RS04160 PF00009 Elongation factor Tu GTP binding domain RPE_RS04160 PF00679 Elongation factor G C-terminus RPE_RS04160 PF03144 Elongation factor Tu domain 2 RPE_RS04160 PF06421 GTP-binding protein LepA C-terminus RPE_RS04165 PF10049 RPE_RS04165 RPE_RS04170 PF11455 RPE_RS04170 RPE_RS04175 PF00561 alpha/beta hydrolase fold RPE_RS04180 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) RPE_RS04185 PF11854 RPE_RS04185 RPE_RS04195 PF13505 Outer membrane protein beta-barrel domain RPE_RS04200 PF00270 DEAD/DEAH box helicase RPE_RS04200 PF00271 Helicase conserved C-terminal domain RPE_RS04200 PF03880 DbpA RNA binding domain RPE_RS04205 PF03747 ADP-ribosylglycohydrolase RPE_RS04210 PF07357 RPE_RS04210 RPE_RS04215 PF00117 Glutamine amidotransferase class-I RPE_RS04240 PF04055 Radical SAM superfamily RPE_RS04240 PF13186 Iron-sulfur cluster-binding domain RPE_RS04240 PF13353 4Fe-4S single cluster domain RPE_RS04245 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RPE_RS04250 PF03070 TENA/THI-4/PQQC family RPE_RS04255 PF12706 Beta-lactamase superfamily domain RPE_RS04260 PF08042 RPE_RS04260 RPE_RS04265 PF00501 AMP-binding enzyme RPE_RS04265 PF13193 AMP-binding enzyme C-terminal domain RPE_RS04270 PF13458 Periplasmic binding protein RPE_RS04275 PF08770 Sulphur oxidation protein SoxZ RPE_RS04275 PF13501 Sulfur oxidation protein SoxY RPE_RS04280 PF00753 Metallo-beta-lactamase superfamily RPE_RS04285 PF01011 PQQ enzyme repeat RPE_RS04285 PF13360 PQQ-like domain RPE_RS04290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPE_RS04295 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPE_RS04300 PF00581 Rhodanese-like domain RPE_RS04315 PF01593 Flavin containing amine oxidoreductase RPE_RS04330 PF00118 TCP-1/cpn60 chaperonin family RPE_RS04335 PF00166 Chaperonin 10 Kd subunit RPE_RS04345 PF07690 Major Facilitator Superfamily RPE_RS04350 PF04344 Chemotaxis phosphatase, CheZ RPE_RS04355 PF03734 L,D-transpeptidase catalytic domain RPE_RS04370 PF09849 RPE_RS04370 RPE_RS04375 PF04794 YdjC-like protein RPE_RS04380 PF00535 Glycosyl transferase family 2 RPE_RS04385 PF01634 ATP phosphoribosyltransferase RPE_RS04390 PF13393 Histidyl-tRNA synthetase RPE_RS04395 PF04452 RNA methyltransferase RPE_RS04405 PF01040 UbiA prenyltransferase family RPE_RS04420 PF01523 Putative modulator of DNA gyrase RPE_RS04425 PF00459 Inositol monophosphatase family RPE_RS04430 PF13773 Domain of unknown function (DUF4170) RPE_RS04435 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RPE_RS04440 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RPE_RS04445 PF09866 RPE_RS04445 RPE_RS04455 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPE_RS04460 PF09335 RPE_RS04460 RPE_RS04465 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS04470 PF05992 RPE_RS04470 RPE_RS04480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS04480 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS04480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS04485 PF00034 Cytochrome c RPE_RS04495 PF00563 EAL domain RPE_RS04495 PF00990 GGDEF domain RPE_RS04500 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS04505 PF00211 Adenylate and Guanylate cyclase catalytic domain RPE_RS04510 PF00067 Cytochrome P450 RPE_RS04515 PF01435 Peptidase family M48 RPE_RS04520 PF00266 Aminotransferase class-V RPE_RS04525 PF00565 Staphylococcal nuclease homologue RPE_RS04535 PF00656 Caspase domain RPE_RS04540 PF13632 Glycosyl transferase family group 2 RPE_RS04545 PF04349 Periplasmic glucan biosynthesis protein, MdoG RPE_RS04550 PF13437 HlyD family secretion protein RPE_RS04555 PF13502 RPE_RS04555 RPE_RS04560 PF00873 AcrB/AcrD/AcrF family RPE_RS04565 PF16576 RPE_RS04565 RPE_RS04570 PF00691 OmpA family RPE_RS04575 PF00656 Caspase domain RPE_RS04575 PF13432 Tetratricopeptide repeat RPE_RS04580 PF01494 FAD binding domain RPE_RS04585 PF10932 RPE_RS04585 RPE_RS04590 PF00753 Metallo-beta-lactamase superfamily RPE_RS04595 PF04209 homogentisate 1,2-dioxygenase RPE_RS04600 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPE_RS04600 PF09298 Fumarylacetoacetase N-terminal RPE_RS04605 PF13393 Histidyl-tRNA synthetase RPE_RS04610 PF00202 Aminotransferase class-III RPE_RS04615 PF00563 EAL domain RPE_RS04620 PF13242 HAD-hyrolase-like RPE_RS04620 PF13344 Haloacid dehalogenase-like hydrolase RPE_RS04635 PF00072 Response regulator receiver domain RPE_RS04640 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ RPE_RS04645 PF00313 'Cold-shock' DNA-binding domain RPE_RS04650 PF13505 Outer membrane protein beta-barrel domain RPE_RS04655 PF01541 GIY-YIG catalytic domain RPE_RS04655 PF02151 UvrB/uvrC motif RPE_RS04655 PF08459 UvrC Helix-hairpin-helix N-terminal RPE_RS04655 PF14520 Helix-hairpin-helix domain RPE_RS04660 PF01066 CDP-alcohol phosphatidyltransferase RPE_RS04665 PF02597 ThiS family RPE_RS04670 PF02391 MoaE protein RPE_RS04675 PF05175 Methyltransferase small domain RPE_RS04680 PF03602 Conserved hypothetical protein 95 RPE_RS04685 PF00849 RNA pseudouridylate synthase RPE_RS04685 PF01479 S4 domain RPE_RS04690 PF14437 RPE_RS04690 RPE_RS04695 PF04191 Phospholipid methyltransferase RPE_RS04700 PF03551 Transcriptional regulator PadR-like family RPE_RS04705 PF02515 CoA-transferase family III RPE_RS04710 PF01361 Tautomerase enzyme RPE_RS04715 PF03061 Thioesterase superfamily RPE_RS04725 PF07584 RPE_RS04725 RPE_RS04725 PF13709 Domain of unknown function (DUF4159) RPE_RS04730 PF01882 RPE_RS04730 RPE_RS04735 PF07726 ATPase family associated with various cellular activities (AAA) RPE_RS04740 PF06938 Protein of unknown function (DUF1285) RPE_RS04745 PF00293 NUDIX domain RPE_RS04755 PF01743 Poly A polymerase head domain RPE_RS04760 PF09926 RPE_RS04760 RPE_RS04765 PF04055 Radical SAM superfamily RPE_RS04765 PF13394 4Fe-4S single cluster domain RPE_RS04770 PF00588 SpoU rRNA Methylase family RPE_RS04775 PF00355 Rieske [2Fe-2S] domain RPE_RS04775 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RPE_RS04780 PF00032 Cytochrome b(C-terminal)/b6/petD RPE_RS04780 PF00033 Cytochrome b(N-terminal)/b6/petB RPE_RS04780 PF02167 Cytochrome C1 family RPE_RS04785 PF01738 Dienelactone hydrolase family RPE_RS04795 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS04800 PF00146 NADH dehydrogenase RPE_RS04810 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS04815 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RPE_RS04815 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RPE_RS04820 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPE_RS04825 PF03797 Autotransporter beta-domain RPE_RS04835 PF01618 RPE_RS04835 RPE_RS04840 PF02472 Biopolymer transport protein ExbD/TolR RPE_RS04845 PF03544 Gram-negative bacterial TonB protein C-terminal RPE_RS04850 PF06627 Protein of unknown function (DUF1153) RPE_RS04855 PF01514 Secretory protein of YscJ/FliF family RPE_RS04855 PF08345 RPE_RS04855 RPE_RS04860 PF01706 FliG C-terminal domain RPE_RS04860 PF14841 FliG middle domain RPE_RS04860 PF14842 FliG N-terminal domain RPE_RS04865 PF02108 RPE_RS04865 RPE_RS04870 PF01052 Surface presentation of antigens (SPOA) RPE_RS04875 PF00072 Response regulator receiver domain RPE_RS04875 PF00158 Sigma-54 interaction domain RPE_RS04875 PF02954 Bacterial regulatory protein, Fis family RPE_RS04885 PF07369 Protein of unknown function (DUF1488) RPE_RS04900 PF01841 Transglutaminase-like superfamily RPE_RS04905 PF13538 UvrD-like helicase C-terminal domain RPE_RS04905 PF13604 AAA domain RPE_RS04910 PF13649 Methyltransferase domain RPE_RS04915 PF00210 Ferritin-like domain RPE_RS04925 PF00117 Glutamine amidotransferase class-I RPE_RS04925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RPE_RS04930 PF09424 Yqey-like protein RPE_RS04935 PF00501 AMP-binding enzyme RPE_RS04935 PF14535 AMP-binding enzyme C-terminal domain RPE_RS04940 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RPE_RS04945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS04950 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RPE_RS04950 PF17147 RPE_RS04950 RPE_RS04955 PF00037 4Fe-4S binding domain RPE_RS04955 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RPE_RS04960 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RPE_RS04960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS04965 PF07848 PaaX-like protein RPE_RS04965 PF08223 PaaX-like protein C-terminal domain RPE_RS04970 PF05138 Phenylacetic acid catabolic protein RPE_RS04975 PF06243 Phenylacetic acid degradation B RPE_RS04980 PF05138 Phenylacetic acid catabolic protein RPE_RS04985 PF01883 Domain of unknown function DUF59 RPE_RS04990 PF00111 2Fe-2S iron-sulfur cluster binding domain RPE_RS04990 PF00175 Oxidoreductase NAD-binding domain RPE_RS04990 PF00970 Oxidoreductase FAD-binding domain RPE_RS04995 PF07110 EthD domain RPE_RS05000 PF00171 Aldehyde dehydrogenase family RPE_RS05000 PF01575 MaoC like domain RPE_RS05005 PF00440 Bacterial regulatory proteins, tetR family RPE_RS05010 PF00501 AMP-binding enzyme RPE_RS05010 PF14535 AMP-binding enzyme C-terminal domain RPE_RS05015 PF03061 Thioesterase superfamily RPE_RS05020 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS05025 PF13458 Periplasmic binding protein RPE_RS05030 PF02653 RPE_RS05030 RPE_RS05035 PF02653 RPE_RS05035 RPE_RS05040 PF00005 ABC transporter RPE_RS05040 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS05045 PF00005 ABC transporter RPE_RS05050 PF12710 haloacid dehalogenase-like hydrolase RPE_RS05055 PF00072 Response regulator receiver domain RPE_RS05055 PF00196 Bacterial regulatory proteins, luxR family RPE_RS05060 PF07730 Histidine kinase RPE_RS05065 PF03098 Animal haem peroxidase RPE_RS05070 PF00005 ABC transporter RPE_RS05070 PF00664 ABC transporter transmembrane region RPE_RS05075 PF00353 Hemolysin-type calcium-binding repeat (2 copies) RPE_RS05080 PF13437 HlyD family secretion protein RPE_RS05080 PF13533 Biotin-lipoyl like RPE_RS05090 PF01610 RPE_RS05090 RPE_RS05095 PF01527 Transposase RPE_RS05100 PF05717 RPE_RS05100 RPE_RS05105 PF03050 RPE_RS05105 RPE_RS05105 PF13005 RPE_RS05105 RPE_RS05105 PF13007 RPE_RS05105 RPE_RS05105 PF13817 RPE_RS05105 RPE_RS05150 PF12616 RPE_RS05150 RPE_RS05160 PF03235 RPE_RS05160 RPE_RS05160 PF07510 RPE_RS05160 RPE_RS05170 PF06412 RPE_RS05170 RPE_RS05175 PF06412 RPE_RS05175 RPE_RS05180 PF03389 MobA/MobL family RPE_RS05180 PF13604 AAA domain RPE_RS05185 PF05930 Prophage CP4-57 regulatory protein (AlpA) RPE_RS05205 PF13476 AAA domain RPE_RS05215 PF12770 RPE_RS05215 RPE_RS05245 PF08241 Methyltransferase domain RPE_RS05250 PF03054 tRNA methyl transferase RPE_RS05255 PF02120 Flagellar hook-length control protein FliK RPE_RS05260 PF03963 RPE_RS05260 RPE_RS05260 PF13860 FlgD Ig-like domain RPE_RS05260 PF13861 FlgD Tudor-like domain RPE_RS05265 PF13406 Transglycosylase SLT domain RPE_RS05285 PF07883 Cupin domain RPE_RS05290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPE_RS05295 PF07995 Glucose / Sorbosone dehydrogenase RPE_RS05310 PF13358 DDE superfamily endonuclease RPE_RS05330 PF00140 Sigma-70 factor, region 1 RPE_RS05330 PF03979 Sigma-70 factor, region 1 RPE_RS05330 PF04539 Sigma-70 region 3 RPE_RS05330 PF04542 Sigma-70 region 2 RPE_RS05330 PF04545 Sigma-70, region 4 RPE_RS05330 PF04546 Sigma-70, non-essential region RPE_RS05335 PF01807 CHC2 zinc finger RPE_RS05335 PF08275 DNA primase catalytic core, N-terminal domain RPE_RS05335 PF10410 DnaB-helicase binding domain of primase RPE_RS05335 PF13662 Toprim domain RPE_RS05345 PF06094 AIG2-like family RPE_RS05350 PF05013 N-formylglutamate amidohydrolase RPE_RS05355 PF02617 ATP-dependent Clp protease adaptor protein ClpS RPE_RS05360 PF06707 Protein of unknown function (DUF1194) RPE_RS05365 PF05958 tRNA (Uracil-5-)-methyltransferase RPE_RS05370 PF01554 MatE RPE_RS05375 PF01479 S4 domain RPE_RS05375 PF01728 FtsJ-like methyltransferase RPE_RS05380 PF05014 Nucleoside 2-deoxyribosyltransferase RPE_RS05390 PF02779 Transketolase, pyrimidine binding domain RPE_RS05390 PF02780 Transketolase, C-terminal domain RPE_RS05390 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RPE_RS05395 PF02609 Exonuclease VII small subunit RPE_RS05400 PF00850 Histone deacetylase domain RPE_RS05405 PF00149 Calcineurin-like phosphoesterase RPE_RS05405 PF02872 5'-nucleotidase, C-terminal domain RPE_RS05415 PF00135 Carboxylesterase family RPE_RS05420 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS05425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS05425 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS05425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS05425 PF12806 RPE_RS05425 RPE_RS05440 PF00589 Phage integrase family RPE_RS05450 PF00239 Resolvase, N terminal domain RPE_RS05450 PF07508 Recombinase RPE_RS05450 PF13408 Recombinase zinc beta ribbon domain RPE_RS05460 PF13817 RPE_RS05460 RPE_RS05470 PF16363 RPE_RS05470 RPE_RS05475 PF00149 Calcineurin-like phosphoesterase RPE_RS05480 PF00648 Calpain family cysteine protease RPE_RS05485 PF00005 ABC transporter RPE_RS05485 PF00664 ABC transporter transmembrane region RPE_RS05485 PF03412 Peptidase C39 family RPE_RS05490 PF13437 HlyD family secretion protein RPE_RS05490 PF13533 Biotin-lipoyl like RPE_RS05500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS05505 PF02706 Chain length determinant protein RPE_RS05510 PF13401 AAA domain RPE_RS05515 PF02563 Polysaccharide biosynthesis/export protein RPE_RS05515 PF10531 SLBB domain RPE_RS05525 PF02397 RPE_RS05525 RPE_RS05525 PF13727 CoA-binding domain RPE_RS05530 PF13432 Tetratricopeptide repeat RPE_RS05530 PF14559 Tetratricopeptide repeat RPE_RS05535 PF09721 RPE_RS05535 RPE_RS05535 PF11984 RPE_RS05535 RPE_RS05540 PF03808 RPE_RS05540 RPE_RS05540 PF13466 STAS domain RPE_RS05545 PF13641 Glycosyltransferase like family 2 RPE_RS05550 PF16363 RPE_RS05550 RPE_RS05560 PF01755 RPE_RS05560 RPE_RS05565 PF00534 Glycosyl transferases group 1 RPE_RS05570 PF00535 Glycosyl transferase family 2 RPE_RS05575 PF00534 Glycosyl transferases group 1 RPE_RS05575 PF13439 Glycosyltransferase Family 4 RPE_RS05585 PF13440 RPE_RS05585 RPE_RS05595 PF04932 RPE_RS05595 RPE_RS05610 PF01757 RPE_RS05610 RPE_RS05615 PF01757 RPE_RS05615 RPE_RS05625 PF05050 Methyltransferase FkbM domain RPE_RS05635 PF03062 RPE_RS05635 RPE_RS05650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPE_RS05650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPE_RS05650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPE_RS05665 PF00196 Bacterial regulatory proteins, luxR family RPE_RS05670 PF07238 PilZ domain RPE_RS05675 PF10098 RPE_RS05675 RPE_RS05690 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS05705 PF04542 Sigma-70 region 2 RPE_RS05705 PF08281 Sigma-70, region 4 RPE_RS05720 PF01527 Transposase RPE_RS05725 PF01527 Transposase RPE_RS05730 PF05717 RPE_RS05730 RPE_RS05735 PF03050 RPE_RS05735 RPE_RS05735 PF13005 RPE_RS05735 RPE_RS05735 PF13007 RPE_RS05735 RPE_RS05735 PF13817 RPE_RS05735 RPE_RS05745 PF13817 RPE_RS05745 RPE_RS05775 PF00872 RPE_RS05775 RPE_RS05780 PF01609 Transposase DDE domain RPE_RS05780 PF05598 RPE_RS05780 RPE_RS05785 PF00872 RPE_RS05785 RPE_RS05800 PF08681 Protein of unknown function (DUF1778) RPE_RS05805 PF00583 Acetyltransferase (GNAT) family RPE_RS05810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPE_RS05815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS05820 PF06748 Protein of unknown function (DUF1217) RPE_RS05825 PF01618 RPE_RS05825 RPE_RS05830 PF01052 Surface presentation of antigens (SPOA) RPE_RS05830 PF02154 Flagellar motor switch protein FliM RPE_RS05840 PF01052 Surface presentation of antigens (SPOA) RPE_RS05845 PF01706 FliG C-terminal domain RPE_RS05845 PF14841 FliG middle domain RPE_RS05845 PF14842 FliG N-terminal domain RPE_RS05850 PF01312 FlhB HrpN YscU SpaS Family RPE_RS05855 PF00460 Flagella basal body rod protein RPE_RS05860 PF00460 Flagella basal body rod protein RPE_RS05860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS05865 PF02049 RPE_RS05865 RPE_RS05870 PF00460 Flagella basal body rod protein RPE_RS05870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS05875 PF13144 SAF-like RPE_RS05880 PF02119 RPE_RS05880 RPE_RS05890 PF02107 RPE_RS05890 RPE_RS05895 PF03748 RPE_RS05895 RPE_RS05900 PF00813 RPE_RS05900 RPE_RS05905 PF00669 Bacterial flagellin N-terminal helical region RPE_RS05905 PF00700 Bacterial flagellin C-terminal helical region RPE_RS05910 PF01514 Secretory protein of YscJ/FliF family RPE_RS05910 PF08345 RPE_RS05910 RPE_RS05920 PF00691 OmpA family RPE_RS05920 PF13677 RPE_RS05920 RPE_RS05930 PF02120 Flagellar hook-length control protein FliK RPE_RS05935 PF01464 Transglycosylase SLT domain RPE_RS05940 PF00460 Flagella basal body rod protein RPE_RS05940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS05940 PF07559 Flagellar basal body protein FlaE RPE_RS05945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS05950 PF00669 Bacterial flagellin N-terminal helical region RPE_RS05950 PF00700 Bacterial flagellin C-terminal helical region RPE_RS05955 PF07309 RPE_RS05955 RPE_RS05960 PF07378 RPE_RS05960 RPE_RS05965 PF03963 RPE_RS05965 RPE_RS05970 PF01313 RPE_RS05970 RPE_RS05975 PF00771 FHIPEP family RPE_RS05980 PF01311 RPE_RS05980 RPE_RS05990 PF10135 RPE_RS05990 RPE_RS06005 PF00486 Transcriptional regulatory protein, C terminal RPE_RS06020 PF00534 Glycosyl transferases group 1 RPE_RS06020 PF13439 Glycosyltransferase Family 4 RPE_RS06025 PF06202 Amylo-alpha-1,6-glucosidase RPE_RS06025 PF14742 RPE_RS06025 RPE_RS06030 PF07690 Major Facilitator Superfamily RPE_RS06035 PF13466 STAS domain RPE_RS06040 PF00072 Response regulator receiver domain RPE_RS06045 PF01584 CheW-like domain RPE_RS06045 PF01627 Hpt domain RPE_RS06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS06045 PF02895 Signal transducing histidine kinase, homodimeric domain RPE_RS06050 PF01584 CheW-like domain RPE_RS06055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS06055 PF00989 PAS fold RPE_RS06055 PF08447 PAS fold RPE_RS06055 PF08448 PAS fold RPE_RS06055 PF13426 PAS domain RPE_RS06060 PF01739 CheR methyltransferase, SAM binding domain RPE_RS06060 PF03705 CheR methyltransferase, all-alpha domain RPE_RS06065 PF03975 CheD chemotactic sensory transduction RPE_RS06070 PF00072 Response regulator receiver domain RPE_RS06070 PF01339 CheB methylesterase RPE_RS06075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS06080 PF13466 STAS domain RPE_RS06085 PF13581 Histidine kinase-like ATPase domain RPE_RS06090 PF00072 Response regulator receiver domain RPE_RS06090 PF07228 Stage II sporulation protein E (SpoIIE) RPE_RS06095 PF01627 Hpt domain RPE_RS06100 PF00072 Response regulator receiver domain RPE_RS06100 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS06100 PF02743 Cache domain RPE_RS06100 PF08447 PAS fold RPE_RS06100 PF12860 RPE_RS06100 RPE_RS06110 PF00581 Rhodanese-like domain RPE_RS06115 PF00355 Rieske [2Fe-2S] domain RPE_RS06115 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RPE_RS06120 PF02579 Dinitrogenase iron-molybdenum cofactor RPE_RS06130 PF05762 VWA domain containing CoxE-like protein RPE_RS06135 PF07728 AAA domain (dynein-related subfamily) RPE_RS06140 PF08223 PaaX-like protein C-terminal domain RPE_RS06145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS06145 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS06150 PF13379 NMT1-like family RPE_RS06155 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS06160 PF00005 ABC transporter RPE_RS06165 PF09347 Domain of unknown function (DUF1989) RPE_RS06170 PF09347 Domain of unknown function (DUF1989) RPE_RS06175 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RPE_RS06175 PF00364 Biotin-requiring enzyme RPE_RS06175 PF02626 Allophanate hydrolase subunit 2 RPE_RS06175 PF02682 Allophanate hydrolase subunit 1 RPE_RS06175 PF02785 Biotin carboxylase C-terminal domain RPE_RS06175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPE_RS06180 PF01425 Amidase RPE_RS06185 PF12977 Domain of Unknown Function with PDB structure (DUF3861) RPE_RS06190 PF00440 Bacterial regulatory proteins, tetR family RPE_RS06190 PF14246 AefR-like transcriptional repressor, C-terminal region RPE_RS06195 PF03929 RPE_RS06195 RPE_RS06200 PF16576 RPE_RS06200 RPE_RS06205 PF00873 AcrB/AcrD/AcrF family RPE_RS06210 PF03992 Antibiotic biosynthesis monooxygenase RPE_RS06215 PF00465 Iron-containing alcohol dehydrogenase RPE_RS06220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPE_RS06220 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RPE_RS06225 PF00374 Nickel-dependent hydrogenase RPE_RS06230 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPE_RS06230 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RPE_RS06235 PF00374 Nickel-dependent hydrogenase RPE_RS06240 PF01292 Prokaryotic cytochrome b561 RPE_RS06245 PF01750 Hydrogenase maturation protease RPE_RS06250 PF01455 HupF/HypC family RPE_RS06255 PF07449 Hydrogenase-1 expression protein HyaE RPE_RS06260 PF04809 HupH hydrogenase expression protein, C-terminal conserved region RPE_RS06265 PF00301 Rubredoxin RPE_RS06270 PF11939 Protein of unknown function (DUF3457) RPE_RS06275 PF00374 Nickel-dependent hydrogenase RPE_RS06280 PF01155 Hydrogenase expression/synthesis hypA family RPE_RS06285 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPE_RS06290 PF00708 Acylphosphatase RPE_RS06290 PF01300 Telomere recombination RPE_RS06290 PF07503 HypF finger RPE_RS06295 PF01455 HupF/HypC family RPE_RS06300 PF01924 Hydrogenase formation hypA family RPE_RS06305 PF00586 AIR synthase related protein, N-terminal domain RPE_RS06305 PF02769 AIR synthase related protein, C-terminal domain RPE_RS06310 PF00072 Response regulator receiver domain RPE_RS06310 PF00158 Sigma-54 interaction domain RPE_RS06310 PF02954 Bacterial regulatory protein, Fis family RPE_RS06315 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS06315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS06315 PF08448 PAS fold RPE_RS06320 PF00149 Calcineurin-like phosphoesterase RPE_RS06325 PF13514 AAA domain RPE_RS06335 PF00205 Thiamine pyrophosphate enzyme, central domain RPE_RS06335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS06335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPE_RS06340 PF01037 AsnC family RPE_RS06340 PF13412 Winged helix-turn-helix DNA-binding RPE_RS06345 PF00581 Rhodanese-like domain RPE_RS06360 PF00384 Molybdopterin oxidoreductase RPE_RS06360 PF01568 Molydopterin dinucleotide binding domain RPE_RS06360 PF04324 BFD-like [2Fe-2S] binding domain RPE_RS06360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPE_RS06365 PF00175 Oxidoreductase NAD-binding domain RPE_RS06365 PF00667 FAD binding domain RPE_RS06365 PF04060 Putative Fe-S cluster RPE_RS06370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RPE_RS06370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RPE_RS06375 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS06380 PF00042 Globin RPE_RS06385 PF00005 ABC transporter RPE_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS06395 PF13379 NMT1-like family RPE_RS06400 PF13379 NMT1-like family RPE_RS06405 PF00072 Response regulator receiver domain RPE_RS06405 PF03861 ANTAR domain RPE_RS06410 PF07886 RPE_RS06410 RPE_RS06425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPE_RS06430 PF00128 Alpha amylase, catalytic domain RPE_RS06430 PF11941 Domain of unknown function (DUF3459) RPE_RS06435 PF00128 Alpha amylase, catalytic domain RPE_RS06435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RPE_RS06440 PF00072 Response regulator receiver domain RPE_RS06445 PF00561 alpha/beta hydrolase fold RPE_RS06455 PF00982 Glycosyltransferase family 20 RPE_RS06465 PF00939 Sodium:sulfate symporter transmembrane region RPE_RS06470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPE_RS06470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPE_RS06470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPE_RS06470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPE_RS06475 PF00196 Bacterial regulatory proteins, luxR family RPE_RS06475 PF03472 Autoinducer binding domain RPE_RS06495 PF03693 Uncharacterised protein family (UPF0156) RPE_RS06500 PF07298 RPE_RS06500 RPE_RS06505 PF05940 RPE_RS06505 RPE_RS06510 PF10006 RPE_RS06510 RPE_RS06515 PF00072 Response regulator receiver domain RPE_RS06515 PF00196 Bacterial regulatory proteins, luxR family RPE_RS06520 PF00556 Antenna complex alpha/beta subunit RPE_RS06525 PF00556 Antenna complex alpha/beta subunit RPE_RS06530 PF03209 RPE_RS06530 RPE_RS06545 PF00743 Flavin-binding monooxygenase-like RPE_RS06545 PF13450 NAD(P)-binding Rossmann-like domain RPE_RS06555 PF09537 Domain of unknown function (DUF2383) RPE_RS06560 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term RPE_RS06560 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus RPE_RS06565 PF04248 Domain of unknown function (DUF427) RPE_RS06570 PF08547 Complex I intermediate-associated protein 30 (CIA30) RPE_RS06575 PF12146 Putative lysophospholipase RPE_RS06580 PF11902 RPE_RS06580 RPE_RS06585 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RPE_RS06585 PF03900 Porphobilinogen deaminase, C-terminal domain RPE_RS06590 PF01078 Magnesium chelatase, subunit ChlI RPE_RS06595 PF13519 von Willebrand factor type A domain RPE_RS06605 PF08447 PAS fold RPE_RS06605 PF12833 Helix-turn-helix domain RPE_RS06610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS06610 PF00672 HAMP domain RPE_RS06610 PF17200 RPE_RS06610 RPE_RS06620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS06620 PF00672 HAMP domain RPE_RS06620 PF17200 RPE_RS06620 RPE_RS06625 PF01208 Uroporphyrinogen decarboxylase (URO-D) RPE_RS06630 PF12697 Alpha/beta hydrolase family RPE_RS06635 PF12697 Alpha/beta hydrolase family RPE_RS06640 PF01593 Flavin containing amine oxidoreductase RPE_RS06645 PF00494 Squalene/phytoene synthase RPE_RS06650 PF01218 Coproporphyrinogen III oxidase RPE_RS06660 PF10027 RPE_RS06660 RPE_RS06665 PF13460 NADH(P)-binding RPE_RS06670 PF01593 Flavin containing amine oxidoreductase RPE_RS06675 PF00348 Polyprenyl synthetase RPE_RS06680 PF00891 O-methyltransferase RPE_RS06680 PF16864 RPE_RS06680 RPE_RS06685 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS06690 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RPE_RS06695 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS06700 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS06700 PF08369 Proto-chlorophyllide reductase 57 kD subunit RPE_RS06705 PF00556 Antenna complex alpha/beta subunit RPE_RS06710 PF00556 Antenna complex alpha/beta subunit RPE_RS06715 PF00124 Photosynthetic reaction centre protein RPE_RS06720 PF00124 Photosynthetic reaction centre protein RPE_RS06725 PF02954 Bacterial regulatory protein, Fis family RPE_RS06725 PF13188 PAS domain RPE_RS06730 PF01040 UbiA prenyltransferase family RPE_RS06735 PF03209 RPE_RS06735 RPE_RS06740 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS06745 PF03073 TspO/MBR family RPE_RS06755 PF00034 Cytochrome c RPE_RS06760 PF02954 Bacterial regulatory protein, Fis family RPE_RS06760 PF13188 PAS domain RPE_RS06765 PF00360 Phytochrome region RPE_RS06765 PF01590 GAF domain RPE_RS06765 PF08446 PAS fold RPE_RS06765 PF13426 PAS domain RPE_RS06770 PF01126 Heme oxygenase RPE_RS06775 PF02310 B12 binding domain RPE_RS06775 PF02607 B12 binding domain RPE_RS06780 PF07284 RPE_RS06780 RPE_RS06785 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS06790 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS06790 PF08369 Proto-chlorophyllide reductase 57 kD subunit RPE_RS06795 PF02514 RPE_RS06795 RPE_RS06795 PF11965 RPE_RS06795 RPE_RS06800 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RPE_RS06805 PF03602 Conserved hypothetical protein 95 RPE_RS06805 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus RPE_RS06810 PF03209 RPE_RS06810 RPE_RS06815 PF03967 Photosynthetic reaction centre, H-chain N-terminal region RPE_RS06815 PF05239 PRC-barrel domain RPE_RS06820 PF03703 RPE_RS06820 RPE_RS06835 PF02915 Rubrerythrin RPE_RS06840 PF12291 RPE_RS06840 RPE_RS06845 PF00155 Aminotransferase class I and II RPE_RS06850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS06850 PF03466 LysR substrate binding domain RPE_RS06855 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RPE_RS06855 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain RPE_RS06860 PF00101 Ribulose bisphosphate carboxylase, small chain RPE_RS06865 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS06870 PF12697 Alpha/beta hydrolase family RPE_RS06875 PF01053 Cys/Met metabolism PLP-dependent enzyme RPE_RS06880 PF00326 Prolyl oligopeptidase family RPE_RS06880 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RPE_RS06885 PF04102 SlyX RPE_RS06890 PF01019 Gamma-glutamyltranspeptidase RPE_RS06895 PF05532 CsbD-like RPE_RS06900 PF00072 Response regulator receiver domain RPE_RS06900 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS06900 PF01627 Hpt domain RPE_RS06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS06900 PF08448 PAS fold RPE_RS06910 PF06983 3-demethylubiquinone-9 3-methyltransferase RPE_RS06915 PF16576 RPE_RS06915 RPE_RS06920 PF00873 AcrB/AcrD/AcrF family RPE_RS06925 PF00440 Bacterial regulatory proteins, tetR family RPE_RS06930 PF01613 Flavin reductase like domain RPE_RS06935 PF00455 RPE_RS06935 RPE_RS06935 PF08220 DeoR-like helix-turn-helix domain RPE_RS06940 PF01266 FAD dependent oxidoreductase RPE_RS06940 PF16901 RPE_RS06940 RPE_RS06945 PF00005 ABC transporter RPE_RS06945 PF08402 TOBE domain RPE_RS06950 PF00005 ABC transporter RPE_RS06955 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS06960 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS06965 PF09928 RPE_RS06965 RPE_RS06975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPE_RS06980 PF02653 RPE_RS06980 RPE_RS06985 PF02653 RPE_RS06985 RPE_RS06990 PF00005 ABC transporter RPE_RS06995 PF00005 ABC transporter RPE_RS06995 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS07000 PF13458 Periplasmic binding protein RPE_RS07005 PF01471 Putative peptidoglycan binding domain RPE_RS07005 PF13406 Transglycosylase SLT domain RPE_RS07010 PF15738 RPE_RS07010 RPE_RS07015 PF04221 RelB antitoxin RPE_RS07020 PF01381 Helix-turn-helix RPE_RS07020 PF06114 Domain of unknown function (DUF955) RPE_RS07020 PF09856 RPE_RS07020 RPE_RS07025 PF00463 Isocitrate lyase family RPE_RS07040 PF00149 Calcineurin-like phosphoesterase RPE_RS07045 PF00293 NUDIX domain RPE_RS07050 PF00924 Mechanosensitive ion channel RPE_RS07055 PF00583 Acetyltransferase (GNAT) family RPE_RS07060 PF00583 Acetyltransferase (GNAT) family RPE_RS07065 PF08681 Protein of unknown function (DUF1778) RPE_RS07070 PF00593 TonB dependent receptor RPE_RS07070 PF07715 TonB-dependent Receptor Plug Domain RPE_RS07080 PF12276 RPE_RS07080 RPE_RS07095 PF00445 Ribonuclease T2 family RPE_RS07100 PF01687 Riboflavin kinase RPE_RS07100 PF06574 FAD synthetase RPE_RS07105 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS07105 PF12464 Maltose acetyltransferase RPE_RS07105 PF14602 Hexapeptide repeat of succinyl-transferase RPE_RS07110 PF08808 RPE_RS07110 RPE_RS07115 PF09722 RPE_RS07115 RPE_RS07120 PF00133 tRNA synthetases class I (I, L, M and V) RPE_RS07120 PF08264 Anticodon-binding domain of tRNA RPE_RS07125 PF01252 RPE_RS07125 RPE_RS07135 PF00675 Insulinase (Peptidase family M16) RPE_RS07135 PF05193 Peptidase M16 inactive domain RPE_RS07140 PF00675 Insulinase (Peptidase family M16) RPE_RS07140 PF05193 Peptidase M16 inactive domain RPE_RS07145 PF00472 RF-1 domain RPE_RS07150 PF01119 DNA mismatch repair protein, C-terminal domain RPE_RS07150 PF08676 MutL C terminal dimerisation domain RPE_RS07150 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS07155 PF03693 Uncharacterised protein family (UPF0156) RPE_RS07160 PF05016 Plasmid stabilisation system protein RPE_RS07165 PF01063 Aminotransferase class IV RPE_RS07170 PF12802 MarR family RPE_RS07175 PF00072 Response regulator receiver domain RPE_RS07175 PF00486 Transcriptional regulatory protein, C terminal RPE_RS07180 PF00672 HAMP domain RPE_RS07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS07185 PF03807 NADP oxidoreductase coenzyme F420-dependent RPE_RS07185 PF14748 Pyrroline-5-carboxylate reductase dimerisation RPE_RS07190 PF10722 Putative bacterial sensory transduction regulator RPE_RS07195 PF00885 6,7-dimethyl-8-ribityllumazine synthase RPE_RS07200 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RPE_RS07200 PF14572 Phosphoribosyl synthetase-associated domain RPE_RS07210 PF02578 Multi-copper polyphenol oxidoreductase laccase RPE_RS07215 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase RPE_RS07220 PF01790 RPE_RS07220 RPE_RS07225 PF04380 RPE_RS07225 RPE_RS07230 PF01386 Ribosomal L25p family RPE_RS07230 PF14693 Ribosomal protein TL5, C-terminal domain RPE_RS07235 PF01195 Peptidyl-tRNA hydrolase RPE_RS07240 PF01926 50S ribosome-binding GTPase RPE_RS07240 PF06071 Protein of unknown function (DUF933) RPE_RS07245 PF14110 RPE_RS07245 RPE_RS07250 PF01575 MaoC like domain RPE_RS07255 PF01575 MaoC like domain RPE_RS07275 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPE_RS07280 PF00005 ABC transporter RPE_RS07280 PF00664 ABC transporter transmembrane region RPE_RS07285 PF01370 NAD dependent epimerase/dehydratase family RPE_RS07290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RPE_RS07295 PF13242 HAD-hyrolase-like RPE_RS07300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RPE_RS07305 PF01370 NAD dependent epimerase/dehydratase family RPE_RS07310 PF00294 pfkB family carbohydrate kinase RPE_RS07310 PF01467 Cytidylyltransferase RPE_RS07315 PF01370 NAD dependent epimerase/dehydratase family RPE_RS07320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPE_RS07325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPE_RS07330 PF03023 RPE_RS07330 RPE_RS07335 PF02543 Carbamoyltransferase RPE_RS07335 PF16861 RPE_RS07335 RPE_RS07345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS07345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPE_RS07350 PF01322 Cytochrome C' RPE_RS07355 PF00034 Cytochrome c RPE_RS07360 PF01037 AsnC family RPE_RS07365 PF08543 Phosphomethylpyrimidine kinase RPE_RS07370 PF08241 Methyltransferase domain RPE_RS07375 PF12850 Calcineurin-like phosphoesterase superfamily domain RPE_RS07380 PF13439 Glycosyltransferase Family 4 RPE_RS07380 PF13692 Glycosyl transferases group 1 RPE_RS07385 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS07395 PF12832 MFS_1 like family RPE_RS07400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RPE_RS07400 PF13378 Enolase C-terminal domain-like RPE_RS07405 PF02405 RPE_RS07405 RPE_RS07410 PF00005 ABC transporter RPE_RS07415 PF02470 RPE_RS07415 RPE_RS07420 PF01442 Apolipoprotein A1/A4/E domain RPE_RS07425 PF01627 Hpt domain RPE_RS07430 PF00111 2Fe-2S iron-sulfur cluster binding domain RPE_RS07435 PF13279 Thioesterase-like superfamily RPE_RS07440 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS07450 PF02384 N-6 DNA Methylase RPE_RS07455 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS07460 PF00563 EAL domain RPE_RS07460 PF00990 GGDEF domain RPE_RS07460 PF03924 CHASE domain RPE_RS07465 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) RPE_RS07470 PF00990 GGDEF domain RPE_RS07475 PF02310 B12 binding domain RPE_RS07475 PF02607 B12 binding domain RPE_RS07485 PF00583 Acetyltransferase (GNAT) family RPE_RS07490 PF08681 Protein of unknown function (DUF1778) RPE_RS07500 PF05974 Domain of unknown function (DUF892) RPE_RS07525 PF03734 L,D-transpeptidase catalytic domain RPE_RS07530 PF00582 Universal stress protein family RPE_RS07535 PF00300 Histidine phosphatase superfamily (branch 1) RPE_RS07540 PF01266 FAD dependent oxidoreductase RPE_RS07545 PF01641 SelR domain RPE_RS07555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS07555 PF07559 Flagellar basal body protein FlaE RPE_RS07560 PF00460 Flagella basal body rod protein RPE_RS07560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS07565 PF00669 Bacterial flagellin N-terminal helical region RPE_RS07565 PF00700 Bacterial flagellin C-terminal helical region RPE_RS07570 PF13580 SIS domain RPE_RS07575 PF13242 HAD-hyrolase-like RPE_RS07580 PF00923 Transaldolase RPE_RS07585 PF01370 NAD dependent epimerase/dehydratase family RPE_RS07590 PF01370 NAD dependent epimerase/dehydratase family RPE_RS07595 PF00294 pfkB family carbohydrate kinase RPE_RS07595 PF01467 Cytidylyltransferase RPE_RS07600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPE_RS07600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RPE_RS07605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPE_RS07605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPE_RS07605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPE_RS07610 PF01370 NAD dependent epimerase/dehydratase family RPE_RS07615 PF08241 Methyltransferase domain RPE_RS07620 PF16363 RPE_RS07620 RPE_RS07625 PF00456 Transketolase, thiamine diphosphate binding domain RPE_RS07630 PF02779 Transketolase, pyrimidine binding domain RPE_RS07630 PF02780 Transketolase, C-terminal domain RPE_RS07640 PF13649 Methyltransferase domain RPE_RS07645 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPE_RS07650 PF13649 Methyltransferase domain RPE_RS07655 PF00669 Bacterial flagellin N-terminal helical region RPE_RS07655 PF00700 Bacterial flagellin C-terminal helical region RPE_RS07655 PF07482 RPE_RS07655 RPE_RS07660 PF13432 Tetratricopeptide repeat RPE_RS07660 PF13844 Glycosyl transferase family 41 RPE_RS07665 PF00669 Bacterial flagellin N-terminal helical region RPE_RS07665 PF00700 Bacterial flagellin C-terminal helical region RPE_RS07665 PF07482 RPE_RS07665 RPE_RS07675 PF07378 RPE_RS07675 RPE_RS07680 PF07309 RPE_RS07680 RPE_RS07695 PF10135 RPE_RS07695 RPE_RS07700 PF02119 RPE_RS07700 RPE_RS07705 PF10768 RPE_RS07705 RPE_RS07710 PF01258 Prokaryotic dksA/traR C4-type zinc finger RPE_RS07715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS07715 PF00672 HAMP domain RPE_RS07720 PF02107 RPE_RS07720 RPE_RS07725 PF13144 SAF-like RPE_RS07730 PF00460 Flagella basal body rod protein RPE_RS07730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS07735 PF00460 Flagella basal body rod protein RPE_RS07735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS07740 PF03748 RPE_RS07740 RPE_RS07745 PF01052 Surface presentation of antigens (SPOA) RPE_RS07745 PF02154 Flagellar motor switch protein FliM RPE_RS07765 PF07690 Major Facilitator Superfamily RPE_RS07770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS07770 PF00672 HAMP domain RPE_RS07770 PF17200 RPE_RS07770 RPE_RS07780 PF00072 Response regulator receiver domain RPE_RS07780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS07780 PF08447 PAS fold RPE_RS07780 PF08448 PAS fold RPE_RS07790 PF00813 RPE_RS07790 RPE_RS07795 PF04347 RPE_RS07795 RPE_RS07800 PF00460 Flagella basal body rod protein RPE_RS07805 PF00460 Flagella basal body rod protein RPE_RS07805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RPE_RS07810 PF02049 RPE_RS07810 RPE_RS07815 PF01313 RPE_RS07815 RPE_RS07820 PF01311 RPE_RS07820 RPE_RS07825 PF01312 FlhB HrpN YscU SpaS Family RPE_RS07830 PF00072 Response regulator receiver domain RPE_RS07830 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS07830 PF08448 PAS fold RPE_RS07830 PF13188 PAS domain RPE_RS07830 PF13426 PAS domain RPE_RS07835 PF08867 RPE_RS07835 RPE_RS07845 PF04280 Tim44-like domain RPE_RS07855 PF14497 Glutathione S-transferase, C-terminal domain RPE_RS07860 PF04191 Phospholipid methyltransferase RPE_RS07875 PF01548 RPE_RS07875 RPE_RS07875 PF02371 RPE_RS07875 RPE_RS07890 PF05016 Plasmid stabilisation system protein RPE_RS07895 PF05681 RPE_RS07895 RPE_RS07895 PF05683 Fumarase C-terminus RPE_RS07900 PF04250 RPE_RS07900 RPE_RS07910 PF16640 RPE_RS07910 RPE_RS07915 PF04279 RPE_RS07915 RPE_RS07920 PF03055 Retinal pigment epithelial membrane protein RPE_RS07925 PF00440 Bacterial regulatory proteins, tetR family RPE_RS07925 PF13305 WHG domain RPE_RS07930 PF00856 SET domain RPE_RS07940 PF13560 Helix-turn-helix domain RPE_RS07945 PF01323 DSBA-like thioredoxin domain RPE_RS07950 PF13480 Acetyltransferase (GNAT) domain RPE_RS07955 PF00656 Caspase domain RPE_RS08000 PF07238 PilZ domain RPE_RS08010 PF10546 RPE_RS08010 RPE_RS08015 PF00154 recA bacterial DNA recombination protein RPE_RS08020 PF02347 Glycine cleavage system P-protein RPE_RS08025 PF01597 Glycine cleavage H-protein RPE_RS08030 PF01571 Aminomethyltransferase folate-binding domain RPE_RS08030 PF08669 Glycine cleavage T-protein C-terminal barrel domain RPE_RS08035 PF01411 tRNA synthetases class II (A) RPE_RS08035 PF02272 DHHA1 domain RPE_RS08035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPE_RS08040 PF00326 Prolyl oligopeptidase family RPE_RS08040 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RPE_RS08045 PF00999 Sodium/hydrogen exchanger family RPE_RS08045 PF02254 TrkA-N domain RPE_RS08055 PF00999 Sodium/hydrogen exchanger family RPE_RS08055 PF02254 TrkA-N domain RPE_RS08060 PF00180 Isocitrate/isopropylmalate dehydrogenase RPE_RS08065 PF00588 SpoU rRNA Methylase family RPE_RS08065 PF04480 Protein of unknown function (DUF559) RPE_RS08070 PF03693 Uncharacterised protein family (UPF0156) RPE_RS08080 PF01272 Transcription elongation factor, GreA/GreB, C-term RPE_RS08085 PF07345 Domain of unknown function (DUF1476) RPE_RS08090 PF01259 SAICAR synthetase RPE_RS08095 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RPE_RS08105 PF13507 CobB/CobQ-like glutamine amidotransferase domain RPE_RS08115 PF03061 Thioesterase superfamily RPE_RS08120 PF00586 AIR synthase related protein, N-terminal domain RPE_RS08120 PF02769 AIR synthase related protein, C-terminal domain RPE_RS08125 PF01757 RPE_RS08125 RPE_RS08130 PF04248 Domain of unknown function (DUF427) RPE_RS08135 PF01722 BolA-like protein RPE_RS08140 PF06772 RPE_RS08140 RPE_RS08145 PF10017 RPE_RS08145 RPE_RS08150 PF03781 Sulfatase-modifying factor enzyme 1 RPE_RS08150 PF12867 DinB superfamily RPE_RS08155 PF00462 Glutaredoxin RPE_RS08160 PF01661 Macro domain RPE_RS08165 PF00144 Beta-lactamase RPE_RS08170 PF14067 RPE_RS08170 RPE_RS08175 PF00487 RPE_RS08175 RPE_RS08180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPE_RS08195 PF07568 RPE_RS08195 RPE_RS08210 PF01212 Beta-eliminating lyase RPE_RS08215 PF00163 Ribosomal protein S4/S9 N-terminal domain RPE_RS08215 PF01479 S4 domain RPE_RS08220 PF13508 Acetyltransferase (GNAT) domain RPE_RS08230 PF07883 Cupin domain RPE_RS08235 PF01177 Asp/Glu/Hydantoin racemase RPE_RS08240 PF01292 Prokaryotic cytochrome b561 RPE_RS08245 PF03473 MOSC domain RPE_RS08250 PF00583 Acetyltransferase (GNAT) family RPE_RS08255 PF08681 Protein of unknown function (DUF1778) RPE_RS08260 PF00206 Lyase RPE_RS08260 PF10397 Adenylosuccinate lyase C-terminus RPE_RS08275 PF00834 Ribulose-phosphate 3 epimerase family RPE_RS08280 PF13499 EF-hand domain pair RPE_RS08285 PF03576 Peptidase family S58 RPE_RS08290 PF02683 RPE_RS08290 RPE_RS08295 PF01541 GIY-YIG catalytic domain RPE_RS08300 PF13458 Periplasmic binding protein RPE_RS08305 PF00005 ABC transporter RPE_RS08310 PF00005 ABC transporter RPE_RS08310 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS08315 PF02653 RPE_RS08315 RPE_RS08315 PF11862 RPE_RS08315 RPE_RS08320 PF02653 RPE_RS08320 RPE_RS08330 PF00561 alpha/beta hydrolase fold RPE_RS08335 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) RPE_RS08340 PF00111 2Fe-2S iron-sulfur cluster binding domain RPE_RS08340 PF01799 [2Fe-2S] binding domain RPE_RS08345 PF00941 FAD binding domain in molybdopterin dehydrogenase RPE_RS08350 PF07728 AAA domain (dynein-related subfamily) RPE_RS08355 PF05762 VWA domain containing CoxE-like protein RPE_RS08360 PF02625 XdhC and CoxI family RPE_RS08365 PF13478 XdhC Rossmann domain RPE_RS08370 PF12804 MobA-like NTP transferase domain RPE_RS08375 PF05050 Methyltransferase FkbM domain RPE_RS08380 PF13827 RPE_RS08380 RPE_RS08390 PF00440 Bacterial regulatory proteins, tetR family RPE_RS08390 PF16859 RPE_RS08390 RPE_RS08395 PF13437 HlyD family secretion protein RPE_RS08395 PF13533 Biotin-lipoyl like RPE_RS08400 PF00005 ABC transporter RPE_RS08405 PF12698 ABC-2 family transporter protein RPE_RS08415 PF17036 RPE_RS08415 RPE_RS08425 PF04343 RPE_RS08425 RPE_RS08430 PF01904 Protein of unknown function DUF72 RPE_RS08435 PF00535 Glycosyl transferase family 2 RPE_RS08435 PF04138 RPE_RS08435 RPE_RS08440 PF13231 RPE_RS08440 RPE_RS08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS08445 PF14759 Reductase C-terminal RPE_RS08450 PF00294 pfkB family carbohydrate kinase RPE_RS08455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPE_RS08455 PF13468 Glyoxalase-like domain RPE_RS08460 PF00440 Bacterial regulatory proteins, tetR family RPE_RS08465 PF16576 RPE_RS08465 RPE_RS08470 PF00873 AcrB/AcrD/AcrF family RPE_RS08475 PF01266 FAD dependent oxidoreductase RPE_RS08485 PF12697 Alpha/beta hydrolase family RPE_RS08490 PF09361 RPE_RS08490 RPE_RS08495 PF02566 OsmC-like protein RPE_RS08495 PF12146 Putative lysophospholipase RPE_RS08500 PF00174 Oxidoreductase molybdopterin binding domain RPE_RS08505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPE_RS08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS08510 PF03466 LysR substrate binding domain RPE_RS08515 PF07286 Protein of unknown function (DUF1445) RPE_RS08520 PF13458 Periplasmic binding protein RPE_RS08525 PF02653 RPE_RS08525 RPE_RS08530 PF02653 RPE_RS08530 RPE_RS08535 PF00005 ABC transporter RPE_RS08535 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS08540 PF00005 ABC transporter RPE_RS08540 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS08545 PF01541 GIY-YIG catalytic domain RPE_RS08550 PF01261 Xylose isomerase-like TIM barrel RPE_RS08555 PF01548 RPE_RS08555 RPE_RS08555 PF02371 RPE_RS08555 RPE_RS08565 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS08570 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS08575 PF01636 Phosphotransferase enzyme family RPE_RS08585 PF08534 Redoxin RPE_RS08590 PF00501 AMP-binding enzyme RPE_RS08590 PF13193 AMP-binding enzyme C-terminal domain RPE_RS08595 PF00768 D-alanyl-D-alanine carboxypeptidase RPE_RS08600 PF00005 ABC transporter RPE_RS08600 PF00664 ABC transporter transmembrane region RPE_RS08605 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RPE_RS08610 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPE_RS08615 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RPE_RS08615 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RPE_RS08620 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RPE_RS08625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RPE_RS08625 PF10531 SLBB domain RPE_RS08625 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPE_RS08630 PF00384 Molybdopterin oxidoreductase RPE_RS08630 PF01568 Molydopterin dinucleotide binding domain RPE_RS08630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPE_RS08630 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPE_RS08630 PF13510 2Fe-2S iron-sulfur cluster binding domain RPE_RS08635 PF00146 NADH dehydrogenase RPE_RS08640 PF12838 4Fe-4S dicluster domain RPE_RS08645 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RPE_RS08650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RPE_RS08655 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS08655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RPE_RS08660 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS08665 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS08670 PF01053 Cys/Met metabolism PLP-dependent enzyme RPE_RS08675 PF00027 Cyclic nucleotide-binding domain RPE_RS08675 PF13545 Crp-like helix-turn-helix domain RPE_RS08680 PF00072 Response regulator receiver domain RPE_RS08685 PF00072 Response regulator receiver domain RPE_RS08685 PF00196 Bacterial regulatory proteins, luxR family RPE_RS08690 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS08690 PF00989 PAS fold RPE_RS08690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS08690 PF08447 PAS fold RPE_RS08695 PF00571 CBS domain RPE_RS08695 PF04972 BON domain RPE_RS08700 PF00582 Universal stress protein family RPE_RS08710 PF07167 RPE_RS08710 RPE_RS08710 PF12551 RPE_RS08710 RPE_RS08715 PF13671 AAA domain RPE_RS08720 PF00571 CBS domain RPE_RS08725 PF13302 Acetyltransferase (GNAT) domain RPE_RS08725 PF13380 CoA binding domain RPE_RS08725 PF13549 ATP-grasp domain RPE_RS08725 PF13607 Succinyl-CoA ligase like flavodoxin domain RPE_RS08740 PF02405 RPE_RS08740 RPE_RS08740 PF13466 STAS domain RPE_RS08745 PF00005 ABC transporter RPE_RS08750 PF02470 RPE_RS08750 RPE_RS08750 PF03886 Protein of unknown function (DUF330) RPE_RS08755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPE_RS08760 PF00027 Cyclic nucleotide-binding domain RPE_RS08760 PF00325 Bacterial regulatory proteins, crp family RPE_RS08765 PF00027 Cyclic nucleotide-binding domain RPE_RS08765 PF00520 Ion transport protein RPE_RS08785 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPE_RS08790 PF03924 CHASE domain RPE_RS08790 PF07536 RPE_RS08790 RPE_RS08795 PF04542 Sigma-70 region 2 RPE_RS08795 PF08281 Sigma-70, region 4 RPE_RS08805 PF00072 Response regulator receiver domain RPE_RS08820 PF01594 RPE_RS08820 RPE_RS08825 PF03734 L,D-transpeptidase catalytic domain RPE_RS08830 PF11064 RPE_RS08830 RPE_RS08835 PF01274 Malate synthase RPE_RS08840 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS08845 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS08850 PF13531 Bacterial extracellular solute-binding protein RPE_RS08855 PF00009 Elongation factor Tu GTP binding domain RPE_RS08855 PF01583 Adenylylsulphate kinase RPE_RS08860 PF01507 Phosphoadenosine phosphosulfate reductase family RPE_RS08865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPE_RS08865 PF10414 Sirohaem synthase dimerisation region RPE_RS08865 PF13241 Putative NAD(P)-binding RPE_RS08865 PF14824 Sirohaem biosynthesis protein central RPE_RS08870 PF11011 RPE_RS08870 RPE_RS08875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RPE_RS08875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RPE_RS08880 PF06073 RPE_RS08880 RPE_RS08885 PF01507 Phosphoadenosine phosphosulfate reductase family RPE_RS08890 PF13531 Bacterial extracellular solute-binding protein RPE_RS08895 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS08900 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS08905 PF00005 ABC transporter RPE_RS08905 PF12857 RPE_RS08905 RPE_RS08910 PF00188 Cysteine-rich secretory protein family RPE_RS08915 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS08925 PF07786 RPE_RS08925 RPE_RS08930 PF12441 RPE_RS08930 RPE_RS08935 PF04365 Protein of unknown function (DUF497) RPE_RS08945 PF00027 Cyclic nucleotide-binding domain RPE_RS08945 PF13545 Crp-like helix-turn-helix domain RPE_RS08960 PF00656 Caspase domain RPE_RS08965 PF00501 AMP-binding enzyme RPE_RS08965 PF13193 AMP-binding enzyme C-terminal domain RPE_RS08970 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS08975 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS08980 PF00501 AMP-binding enzyme RPE_RS08980 PF13193 AMP-binding enzyme C-terminal domain RPE_RS08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS08985 PF03466 LysR substrate binding domain RPE_RS08990 PF03601 RPE_RS08990 RPE_RS08995 PF00072 Response regulator receiver domain RPE_RS08995 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS08995 PF00672 HAMP domain RPE_RS08995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS08995 PF02743 Cache domain RPE_RS08995 PF13426 PAS domain RPE_RS09005 PF07238 PilZ domain RPE_RS09010 PF01966 HD domain RPE_RS09015 PF01593 Flavin containing amine oxidoreductase RPE_RS09020 PF00311 Phosphoenolpyruvate carboxylase RPE_RS09025 PF00691 OmpA family RPE_RS09030 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS09040 PF01796 RPE_RS09040 RPE_RS09040 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) RPE_RS09045 PF01425 Amidase RPE_RS09050 PF11010 RPE_RS09050 RPE_RS09070 PF00205 Thiamine pyrophosphate enzyme, central domain RPE_RS09070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS09070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPE_RS09075 PF03328 HpcH/HpaI aldolase/citrate lyase family RPE_RS09080 PF17200 RPE_RS09080 RPE_RS09085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS09085 PF00672 HAMP domain RPE_RS09090 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RPE_RS09095 PF02310 B12 binding domain RPE_RS09095 PF04055 Radical SAM superfamily RPE_RS09095 PF13282 RPE_RS09095 RPE_RS09100 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RPE_RS09105 PF03176 MMPL family RPE_RS09120 PF00494 Squalene/phytoene synthase RPE_RS09125 PF00494 Squalene/phytoene synthase RPE_RS09130 PF01593 Flavin containing amine oxidoreductase RPE_RS09135 PF01048 Phosphorylase superfamily RPE_RS09140 PF04055 Radical SAM superfamily RPE_RS09140 PF11946 RPE_RS09140 RPE_RS09145 PF02401 LytB protein RPE_RS09150 PF03176 MMPL family RPE_RS09155 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) RPE_RS09160 PF00202 Aminotransferase class-III RPE_RS09170 PF00732 GMC oxidoreductase RPE_RS09170 PF05199 GMC oxidoreductase RPE_RS09175 PF01546 Peptidase family M20/M25/M40 RPE_RS09175 PF07687 Peptidase dimerisation domain RPE_RS09180 PF05974 Domain of unknown function (DUF892) RPE_RS09185 PF03167 Uracil DNA glycosylase superfamily RPE_RS09185 PF13566 RPE_RS09185 RPE_RS09200 PF00817 impB/mucB/samB family RPE_RS09205 PF01336 OB-fold nucleic acid binding domain RPE_RS09205 PF02811 PHP domain RPE_RS09205 PF07733 Bacterial DNA polymerase III alpha subunit RPE_RS09205 PF14579 Helix-hairpin-helix motif RPE_RS09210 PF00583 Acetyltransferase (GNAT) family RPE_RS09215 PF04187 Protein of unknown function, DUF399 RPE_RS09220 PF03693 Uncharacterised protein family (UPF0156) RPE_RS09235 PF00563 EAL domain RPE_RS09235 PF00990 GGDEF domain RPE_RS09235 PF08447 PAS fold RPE_RS09245 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS09255 PF10098 RPE_RS09255 RPE_RS09260 PF00990 GGDEF domain RPE_RS09265 PF04542 Sigma-70 region 2 RPE_RS09265 PF08281 Sigma-70, region 4 RPE_RS09280 PF10518 TAT (twin-arginine translocation) pathway signal sequence RPE_RS09280 PF13229 Right handed beta helix region RPE_RS09290 PF01470 Pyroglutamyl peptidase RPE_RS09295 PF03308 ArgK protein RPE_RS09305 PF01934 Protein of unknown function DUF86 RPE_RS09310 PF01909 Nucleotidyltransferase domain RPE_RS09320 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RPE_RS09325 PF01642 Methylmalonyl-CoA mutase RPE_RS09325 PF02310 B12 binding domain RPE_RS09330 PF04828 Glutathione-dependent formaldehyde-activating enzyme RPE_RS09335 PF01642 Methylmalonyl-CoA mutase RPE_RS09340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RPE_RS09345 PF02152 Dihydroneopterin aldolase RPE_RS09350 PF00809 Pterin binding enzyme RPE_RS09355 PF14229 RPE_RS09355 RPE_RS09365 PF05872 RPE_RS09365 RPE_RS09370 PF01546 Peptidase family M20/M25/M40 RPE_RS09370 PF07687 Peptidase dimerisation domain RPE_RS09375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS09375 PF00672 HAMP domain RPE_RS09380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS09380 PF13682 Chemoreceptor zinc-binding domain RPE_RS09385 PF13354 Beta-lactamase enzyme family RPE_RS09390 PF13231 RPE_RS09390 RPE_RS09400 PF05443 ROS/MUCR transcriptional regulator protein RPE_RS09410 PF02657 Fe-S metabolism associated domain RPE_RS09420 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS09425 PF01471 Putative peptidoglycan binding domain RPE_RS09430 PF07372 Protein of unknown function (DUF1491) RPE_RS09435 PF10098 RPE_RS09435 RPE_RS09440 PF13670 RPE_RS09440 RPE_RS09460 PF06742 Protein of unknown function (DUF1214) RPE_RS09465 PF00905 Penicillin binding protein transpeptidase domain RPE_RS09465 PF00912 Transglycosylase RPE_RS09470 PF03692 RPE_RS09470 RPE_RS09475 PF04964 RPE_RS09475 RPE_RS09480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS09480 PF00672 HAMP domain RPE_RS09485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS09485 PF00672 HAMP domain RPE_RS09490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS09490 PF00672 HAMP domain RPE_RS09490 PF17200 RPE_RS09490 RPE_RS09500 PF08447 PAS fold RPE_RS09500 PF12833 Helix-turn-helix domain RPE_RS09505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS09505 PF00672 HAMP domain RPE_RS09520 PF03237 Terminase-like family RPE_RS09525 PF01541 GIY-YIG catalytic domain RPE_RS09530 PF04860 Phage portal protein RPE_RS09535 PF07238 PilZ domain RPE_RS09550 PF04586 RPE_RS09550 RPE_RS09560 PF01609 Transposase DDE domain RPE_RS09560 PF13808 RPE_RS09560 RPE_RS09565 PF00872 RPE_RS09565 RPE_RS09575 PF00872 RPE_RS09575 RPE_RS09590 PF05065 Phage capsid family RPE_RS09600 PF09450 Domain of unknown function (DUF2019) RPE_RS09610 PF00089 Trypsin RPE_RS09615 PF05135 Phage gp6-like head-tail connector protein RPE_RS09620 PF05521 Phage head-tail joining protein RPE_RS09625 PF11367 Protein of unknown function (DUF3168) RPE_RS09630 PF06199 RPE_RS09630 RPE_RS09635 PF11836 RPE_RS09635 RPE_RS09640 PF09550 RPE_RS09640 RPE_RS09650 PF09343 RPE_RS09650 RPE_RS09655 PF09356 RPE_RS09655 RPE_RS09655 PF09931 RPE_RS09655 RPE_RS09660 PF00877 NlpC/P60 family RPE_RS09665 PF13547 RPE_RS09665 RPE_RS09665 PF13550 RPE_RS09665 RPE_RS09680 PF11351 RPE_RS09680 RPE_RS09685 PF00072 Response regulator receiver domain RPE_RS09685 PF00486 Transcriptional regulatory protein, C terminal RPE_RS09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS09695 PF16998 RPE_RS09695 RPE_RS09705 PF13432 Tetratricopeptide repeat RPE_RS09710 PF03100 CcmE RPE_RS09715 PF01578 RPE_RS09715 RPE_RS09715 PF16327 RPE_RS09715 RPE_RS09720 PF03918 Cytochrome C biogenesis protein RPE_RS09725 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPE_RS09725 PF07683 Cobalamin synthesis protein cobW C-terminal domain RPE_RS09730 PF02915 Rubrerythrin RPE_RS09735 PF00111 2Fe-2S iron-sulfur cluster binding domain RPE_RS09740 PF13180 PDZ domain RPE_RS09740 PF13365 Trypsin-like peptidase domain RPE_RS09745 PF00072 Response regulator receiver domain RPE_RS09745 PF00486 Transcriptional regulatory protein, C terminal RPE_RS09750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS09750 PF00672 HAMP domain RPE_RS09755 PF00672 HAMP domain RPE_RS09755 PF00990 GGDEF domain RPE_RS09755 PF12729 RPE_RS09755 RPE_RS09760 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS09760 PF00672 HAMP domain RPE_RS09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS09765 PF03710 Glutamate-ammonia ligase adenylyltransferase RPE_RS09765 PF08335 GlnD PII-uridylyltransferase RPE_RS09770 PF06532 RPE_RS09770 RPE_RS09775 PF04542 Sigma-70 region 2 RPE_RS09775 PF08281 Sigma-70, region 4 RPE_RS09780 PF10048 RPE_RS09780 RPE_RS09785 PF05114 Protein of unknown function (DUF692) RPE_RS09790 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) RPE_RS09795 PF07681 RPE_RS09795 RPE_RS09800 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS09800 PF08447 PAS fold RPE_RS09800 PF12860 RPE_RS09800 RPE_RS09805 PF01545 Cation efflux family RPE_RS09805 PF16916 RPE_RS09805 RPE_RS09810 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPE_RS09810 PF10370 Domain of unknown function (DUF2437) RPE_RS09815 PF02558 Ketopantoate reductase PanE/ApbA RPE_RS09815 PF08546 Ketopantoate reductase PanE/ApbA C terminal RPE_RS09820 PF01970 RPE_RS09820 RPE_RS09825 PF07331 RPE_RS09825 RPE_RS09830 PF03401 Tripartite tricarboxylate transporter family receptor RPE_RS09835 PF02515 CoA-transferase family III RPE_RS09840 PF00392 Bacterial regulatory proteins, gntR family RPE_RS09840 PF07729 FCD domain RPE_RS09845 PF02705 RPE_RS09845 RPE_RS09865 PF00072 Response regulator receiver domain RPE_RS09865 PF00486 Transcriptional regulatory protein, C terminal RPE_RS09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS09880 PF00216 Bacterial DNA-binding protein RPE_RS09885 PF02361 Cobalt transport protein RPE_RS09895 PF01891 Cobalt uptake substrate-specific transmembrane region RPE_RS09900 PF10670 RPE_RS09900 RPE_RS09905 PF01402 Ribbon-helix-helix protein, copG family RPE_RS09905 PF08753 NikR C terminal nickel binding domain RPE_RS09915 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS09920 PF01207 Dihydrouridine synthase (Dus) RPE_RS09925 PF13975 RPE_RS09925 RPE_RS09930 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS09930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS09935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPE_RS09935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RPE_RS09940 PF01883 Domain of unknown function DUF59 RPE_RS09940 PF10609 ParA/MinD ATPase like RPE_RS09945 PF03480 Bacterial extracellular solute-binding protein, family 7 RPE_RS09945 PF10518 TAT (twin-arginine translocation) pathway signal sequence RPE_RS09950 PF06808 RPE_RS09950 RPE_RS09955 PF04290 RPE_RS09955 RPE_RS09960 PF04055 Radical SAM superfamily RPE_RS09960 PF06463 Molybdenum Cofactor Synthesis C RPE_RS09960 PF13353 4Fe-4S single cluster domain RPE_RS09970 PF13419 Haloacid dehalogenase-like hydrolase RPE_RS09975 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RPE_RS09980 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) RPE_RS09985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPE_RS09985 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS09990 PF12146 Putative lysophospholipase RPE_RS09995 PF01474 Class-II DAHP synthetase family RPE_RS10000 PF01219 Prokaryotic diacylglycerol kinase RPE_RS10005 PF00795 Carbon-nitrogen hydrolase RPE_RS10005 PF02540 NAD synthase RPE_RS10010 PF01850 PIN domain RPE_RS10015 PF04014 Antidote-toxin recognition MazE RPE_RS10020 PF11064 RPE_RS10020 RPE_RS10030 PF01406 tRNA synthetases class I (C) catalytic domain RPE_RS10040 PF13673 Acetyltransferase (GNAT) domain RPE_RS10045 PF00682 HMGL-like RPE_RS10045 PF08502 LeuA allosteric (dimerisation) domain RPE_RS10050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPE_RS10055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS10055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPE_RS10060 PF01565 FAD binding domain RPE_RS10060 PF02913 FAD linked oxidases, C-terminal domain RPE_RS10065 PF03641 Possible lysine decarboxylase RPE_RS10070 PF00005 ABC transporter RPE_RS10070 PF00664 ABC transporter transmembrane region RPE_RS10075 PF02666 RPE_RS10075 RPE_RS10080 PF01066 CDP-alcohol phosphatidyltransferase RPE_RS10080 PF08009 RPE_RS10080 RPE_RS10085 PF01618 RPE_RS10085 RPE_RS10090 PF00691 OmpA family RPE_RS10090 PF13677 RPE_RS10090 RPE_RS10095 PF02705 RPE_RS10095 RPE_RS10100 PF00581 Rhodanese-like domain RPE_RS10105 PF00155 Aminotransferase class I and II RPE_RS10110 PF13416 Bacterial extracellular solute-binding protein RPE_RS10120 PF03279 RPE_RS10120 RPE_RS10125 PF00107 Zinc-binding dehydrogenase RPE_RS10125 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS10130 PF00109 Beta-ketoacyl synthase, N-terminal domain RPE_RS10130 PF02801 Beta-ketoacyl synthase, C-terminal domain RPE_RS10135 PF00109 Beta-ketoacyl synthase, N-terminal domain RPE_RS10140 PF07977 FabA-like domain RPE_RS10145 PF00550 Phosphopantetheine attachment site RPE_RS10155 PF02308 RPE_RS10155 RPE_RS10160 PF02627 Carboxymuconolactone decarboxylase family RPE_RS10165 PF01935 Domain of unknown function DUF87 RPE_RS10170 PF08450 SMP-30/Gluconolaconase/LRE-like region RPE_RS10175 PF13302 Acetyltransferase (GNAT) domain RPE_RS10185 PF07728 AAA domain (dynein-related subfamily) RPE_RS10190 PF00990 GGDEF domain RPE_RS10190 PF02743 Cache domain RPE_RS10190 PF08447 PAS fold RPE_RS10195 PF05762 VWA domain containing CoxE-like protein RPE_RS10200 PF00581 Rhodanese-like domain RPE_RS10205 PF00581 Rhodanese-like domain RPE_RS10215 PF03734 L,D-transpeptidase catalytic domain RPE_RS10225 PF00005 ABC transporter RPE_RS10225 PF12848 ABC transporter RPE_RS10235 PF04014 Antidote-toxin recognition MazE RPE_RS10240 PF12441 RPE_RS10240 RPE_RS10245 PF04365 Protein of unknown function (DUF497) RPE_RS10250 PF13489 Methyltransferase domain RPE_RS10255 PF03350 RPE_RS10255 RPE_RS10265 PF01471 Putative peptidoglycan binding domain RPE_RS10265 PF13406 Transglycosylase SLT domain RPE_RS10270 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS10275 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS10280 PF00005 ABC transporter RPE_RS10285 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RPE_RS10310 PF00210 Ferritin-like domain RPE_RS10315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS10320 PF13564 RPE_RS10320 RPE_RS10335 PF11684 RPE_RS10335 RPE_RS10345 PF00990 GGDEF domain RPE_RS10355 PF10049 RPE_RS10355 RPE_RS10360 PF14076 RPE_RS10360 RPE_RS10370 PF01797 Transposase IS200 like RPE_RS10380 PF01964 ThiC family RPE_RS10380 PF13667 ThiC-associated domain RPE_RS10385 PF02581 Thiamine monophosphate synthase/TENI RPE_RS10390 PF05690 Thiazole biosynthesis protein ThiG RPE_RS10395 PF02597 ThiS family RPE_RS10400 PF01266 FAD dependent oxidoreductase RPE_RS10405 PF05239 PRC-barrel domain RPE_RS10410 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS10415 PF14356 RPE_RS10415 RPE_RS10430 PF03734 L,D-transpeptidase catalytic domain RPE_RS10440 PF01979 Amidohydrolase family RPE_RS10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS10445 PF03466 LysR substrate binding domain RPE_RS10450 PF00248 Aldo/keto reductase family RPE_RS10455 PF00107 Zinc-binding dehydrogenase RPE_RS10455 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS10460 PF12802 MarR family RPE_RS10490 PF06904 RPE_RS10490 RPE_RS10495 PF00440 Bacterial regulatory proteins, tetR family RPE_RS10495 PF14246 AefR-like transcriptional repressor, C-terminal region RPE_RS10500 PF13533 Biotin-lipoyl like RPE_RS10500 PF16576 RPE_RS10500 RPE_RS10505 PF07690 Major Facilitator Superfamily RPE_RS10515 PF00593 TonB dependent receptor RPE_RS10515 PF07715 TonB-dependent Receptor Plug Domain RPE_RS10520 PF13847 Methyltransferase domain RPE_RS10525 PF12833 Helix-turn-helix domain RPE_RS10525 PF12852 Cupin RPE_RS10530 PF01471 Putative peptidoglycan binding domain RPE_RS10530 PF01510 N-acetylmuramoyl-L-alanine amidase RPE_RS10535 PF01795 MraW methylase family RPE_RS10545 PF00905 Penicillin binding protein transpeptidase domain RPE_RS10545 PF03717 Penicillin-binding Protein dimerisation domain RPE_RS10550 PF01225 Mur ligase family, catalytic domain RPE_RS10550 PF02875 Mur ligase family, glutamate ligase domain RPE_RS10550 PF08245 Mur ligase middle domain RPE_RS10555 PF01225 Mur ligase family, catalytic domain RPE_RS10555 PF02875 Mur ligase family, glutamate ligase domain RPE_RS10555 PF08245 Mur ligase middle domain RPE_RS10560 PF00953 Glycosyl transferase family 4 RPE_RS10560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RPE_RS10565 PF08245 Mur ligase middle domain RPE_RS10570 PF01098 RPE_RS10570 RPE_RS10575 PF03033 Glycosyltransferase family 28 N-terminal domain RPE_RS10575 PF04101 Glycosyltransferase family 28 C-terminal domain RPE_RS10580 PF01225 Mur ligase family, catalytic domain RPE_RS10580 PF02875 Mur ligase family, glutamate ligase domain RPE_RS10580 PF08245 Mur ligase middle domain RPE_RS10585 PF01541 GIY-YIG catalytic domain RPE_RS10590 PF01565 FAD binding domain RPE_RS10590 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RPE_RS10595 PF14023 RPE_RS10595 RPE_RS10600 PF00534 Glycosyl transferases group 1 RPE_RS10600 PF13439 Glycosyltransferase Family 4 RPE_RS10605 PF01820 D-ala D-ala ligase N-terminus RPE_RS10605 PF07478 D-ala D-ala ligase C-terminus RPE_RS10610 PF03799 Cell division protein FtsQ RPE_RS10610 PF08478 POTRA domain, FtsQ-type RPE_RS10615 PF02491 SHS2 domain inserted in FTSA RPE_RS10615 PF14450 Cell division protein FtsA RPE_RS10620 PF00091 Tubulin/FtsZ family, GTPase domain RPE_RS10620 PF12327 FtsZ family, C-terminal domain RPE_RS10625 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RPE_RS10630 PF13525 Outer membrane lipoprotein RPE_RS10635 PF02463 RecF/RecN/SMC N terminal domain RPE_RS10640 PF01541 GIY-YIG catalytic domain RPE_RS10645 PF00533 BRCA1 C Terminus (BRCT) domain RPE_RS10645 PF01653 NAD-dependent DNA ligase adenylation domain RPE_RS10645 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RPE_RS10645 PF03120 NAD-dependent DNA ligase OB-fold domain RPE_RS10645 PF12826 Helix-hairpin-helix motif RPE_RS10650 PF07690 Major Facilitator Superfamily RPE_RS10655 PF00557 Metallopeptidase family M24 RPE_RS10655 PF01321 Creatinase/Prolidase N-terminal domain RPE_RS10655 PF16188 RPE_RS10655 RPE_RS10655 PF16189 RPE_RS10655 RPE_RS10665 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RPE_RS10670 PF02661 Fic/DOC family RPE_RS10675 PF01593 Flavin containing amine oxidoreductase RPE_RS10685 PF03734 L,D-transpeptidase catalytic domain RPE_RS10695 PF01061 RPE_RS10695 RPE_RS10700 PF00005 ABC transporter RPE_RS10710 PF15919 RPE_RS10710 RPE_RS10715 PF15919 RPE_RS10715 RPE_RS10720 PF00580 UvrD/REP helicase N-terminal domain RPE_RS10720 PF13361 UvrD-like helicase C-terminal domain RPE_RS10730 PF13279 Thioesterase-like superfamily RPE_RS10735 PF01565 FAD binding domain RPE_RS10735 PF02913 FAD linked oxidases, C-terminal domain RPE_RS10740 PF05170 RPE_RS10740 RPE_RS10740 PF13502 RPE_RS10740 RPE_RS10745 PF13467 Ribbon-helix-helix domain RPE_RS10750 PF00206 Lyase RPE_RS10750 PF10415 Fumarase C C-terminus RPE_RS10755 PF04386 Stringent starvation protein B RPE_RS10760 PF07331 RPE_RS10760 RPE_RS10765 PF01970 RPE_RS10765 RPE_RS10770 PF03401 Tripartite tricarboxylate transporter family receptor RPE_RS10775 PF00303 Thymidylate synthase RPE_RS10780 PF00303 Thymidylate synthase RPE_RS10795 PF01734 Patatin-like phospholipase RPE_RS10850 PF00271 Helicase conserved C-terminal domain RPE_RS10860 PF08378 RPE_RS10860 RPE_RS10860 PF13245 Part of AAA domain RPE_RS10865 PF00270 DEAD/DEAH box helicase RPE_RS10865 PF00271 Helicase conserved C-terminal domain RPE_RS10865 PF09369 RPE_RS10865 RPE_RS10870 PF04542 Sigma-70 region 2 RPE_RS10875 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS10880 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS10885 PF14236 RPE_RS10885 RPE_RS10890 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS10890 PF01434 Peptidase family M41 RPE_RS10905 PF00303 Thymidylate synthase RPE_RS10910 PF05168 HEPN domain RPE_RS10920 PF00186 Dihydrofolate reductase RPE_RS10925 PF01145 SPFH domain / Band 7 family RPE_RS10925 PF12221 RPE_RS10925 RPE_RS10930 PF01145 SPFH domain / Band 7 family RPE_RS10935 PF09838 RPE_RS10935 RPE_RS10940 PF00595 PDZ domain (Also known as DHR or GLGF) RPE_RS10940 PF13180 PDZ domain RPE_RS10940 PF13365 Trypsin-like peptidase domain RPE_RS10945 PF01609 Transposase DDE domain RPE_RS10945 PF13808 RPE_RS10945 RPE_RS10960 PF12710 haloacid dehalogenase-like hydrolase RPE_RS10965 PF01715 IPP transferase RPE_RS10970 PF00205 Thiamine pyrophosphate enzyme, central domain RPE_RS10970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS10970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPE_RS10975 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS10980 PF01842 ACT domain RPE_RS10980 PF10369 Small subunit of acetolactate synthase RPE_RS10985 PF10116 RPE_RS10985 RPE_RS10990 PF04014 Antidote-toxin recognition MazE RPE_RS10995 PF02452 PemK-like protein RPE_RS11005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RPE_RS11005 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain RPE_RS11010 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RPE_RS11015 PF00106 short chain dehydrogenase RPE_RS11020 PF00884 Sulfatase RPE_RS11030 PF07690 Major Facilitator Superfamily RPE_RS11035 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS11035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RPE_RS11040 PF00005 ABC transporter RPE_RS11050 PF10049 RPE_RS11050 RPE_RS11060 PF03976 Polyphosphate kinase 2 (PPK2) RPE_RS11065 PF04014 Antidote-toxin recognition MazE RPE_RS11070 PF04055 Radical SAM superfamily RPE_RS11070 PF06968 Biotin and Thiamin Synthesis associated domain RPE_RS11075 PF00682 HMGL-like RPE_RS11075 PF08502 LeuA allosteric (dimerisation) domain RPE_RS11080 PF03480 Bacterial extracellular solute-binding protein, family 7 RPE_RS11085 PF04290 RPE_RS11085 RPE_RS11090 PF06808 RPE_RS11090 RPE_RS11095 PF07813 LTXXQ motif family protein RPE_RS11110 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RPE_RS11110 PF03033 Glycosyltransferase family 28 N-terminal domain RPE_RS11125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPE_RS11130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS11130 PF07685 CobB/CobQ-like glutamine amidotransferase domain RPE_RS11135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPE_RS11140 PF01890 Cobalamin synthesis G C-terminus RPE_RS11145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPE_RS11150 PF02571 RPE_RS11150 RPE_RS11155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPE_RS11160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPE_RS11165 PF02570 Precorrin-8X methylmutase RPE_RS11180 PF00890 FAD binding domain RPE_RS11185 PF02277 Phosphoribosyltransferase RPE_RS11190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPE_RS11195 PF01891 Cobalt uptake substrate-specific transmembrane region RPE_RS11200 PF00881 Nitroreductase family RPE_RS11205 PF07845 RPE_RS11205 RPE_RS11210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RPE_RS11215 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPE_RS11215 PF07683 Cobalamin synthesis protein cobW C-terminal domain RPE_RS11220 PF02514 RPE_RS11220 RPE_RS11225 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RPE_RS11230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS11230 PF07685 CobB/CobQ-like glutamine amidotransferase domain RPE_RS11235 PF03186 RPE_RS11235 RPE_RS11240 PF00155 Aminotransferase class I and II RPE_RS11260 PF12570 RPE_RS11260 RPE_RS11270 PF00072 Response regulator receiver domain RPE_RS11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS11270 PF02743 Cache domain RPE_RS11280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS11280 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS11280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS11285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS11285 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS11285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS11290 PF13417 Glutathione S-transferase, N-terminal domain RPE_RS11295 PF12833 Helix-turn-helix domain RPE_RS11300 PF05853 Prokaryotic protein of unknown function (DUF849) RPE_RS11305 PF00501 AMP-binding enzyme RPE_RS11305 PF13193 AMP-binding enzyme C-terminal domain RPE_RS11310 PF01039 Carboxyl transferase domain RPE_RS11315 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RPE_RS11315 PF00364 Biotin-requiring enzyme RPE_RS11315 PF02785 Biotin carboxylase C-terminal domain RPE_RS11315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPE_RS11320 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS11330 PF00144 Beta-lactamase RPE_RS11335 PF00892 EamA-like transporter family RPE_RS11340 PF00171 Aldehyde dehydrogenase family RPE_RS11345 PF00920 Dehydratase family RPE_RS11360 PF10908 RPE_RS11360 RPE_RS11365 PF05150 RPE_RS11365 RPE_RS11380 PF03235 RPE_RS11380 RPE_RS11385 PF09537 Domain of unknown function (DUF2383) RPE_RS11390 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS11395 PF12840 Helix-turn-helix domain RPE_RS11405 PF12840 Helix-turn-helix domain RPE_RS11420 PF01047 MarR family RPE_RS11425 PF00561 alpha/beta hydrolase fold RPE_RS11430 PF12697 Alpha/beta hydrolase family RPE_RS11435 PF01541 GIY-YIG catalytic domain RPE_RS11440 PF13649 Methyltransferase domain RPE_RS11445 PF01541 GIY-YIG catalytic domain RPE_RS11450 PF02810 SEC-C motif RPE_RS11450 PF03695 Uncharacterised protein family (UPF0149) RPE_RS11455 PF00118 TCP-1/cpn60 chaperonin family RPE_RS11460 PF00166 Chaperonin 10 Kd subunit RPE_RS11465 PF06233 RPE_RS11465 RPE_RS11475 PF06414 Zeta toxin RPE_RS11480 PF01773 Na+ dependent nucleoside transporter N-terminus RPE_RS11480 PF07662 Na+ dependent nucleoside transporter C-terminus RPE_RS11485 PF00072 Response regulator receiver domain RPE_RS11485 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS11485 PF02743 Cache domain RPE_RS11495 PF01757 RPE_RS11495 RPE_RS11500 PF00106 short chain dehydrogenase RPE_RS11505 PF00583 Acetyltransferase (GNAT) family RPE_RS11510 PF01548 RPE_RS11510 RPE_RS11510 PF02371 RPE_RS11510 RPE_RS11515 PF00227 Proteasome subunit RPE_RS11520 PF01841 Transglutaminase-like superfamily RPE_RS11520 PF08379 RPE_RS11520 RPE_RS11525 PF04168 RPE_RS11525 RPE_RS11530 PF14403 RPE_RS11530 RPE_RS11535 PF00994 Probable molybdopterin binding domain RPE_RS11540 PF00156 Phosphoribosyl transferase domain RPE_RS11550 PF01717 Cobalamin-independent synthase, Catalytic domain RPE_RS11555 PF00043 Glutathione S-transferase, C-terminal domain RPE_RS11555 PF02798 Glutathione S-transferase, N-terminal domain RPE_RS11560 PF01323 DSBA-like thioredoxin domain RPE_RS11565 PF00107 Zinc-binding dehydrogenase RPE_RS11565 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS11570 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS11585 PF01494 FAD binding domain RPE_RS11590 PF10276 Zinc-finger domain RPE_RS11600 PF00561 alpha/beta hydrolase fold RPE_RS11610 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS11610 PF06426 Serine acetyltransferase, N-terminal RPE_RS11615 PF11324 RPE_RS11615 RPE_RS11630 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS11640 PF02530 RPE_RS11640 RPE_RS11655 PF00765 Autoinducer synthetase RPE_RS11660 PF00196 Bacterial regulatory proteins, luxR family RPE_RS11660 PF03472 Autoinducer binding domain RPE_RS11665 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP RPE_RS11670 PF07238 PilZ domain RPE_RS11675 PF00072 Response regulator receiver domain RPE_RS11675 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS11675 PF00989 PAS fold RPE_RS11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS11680 PF00072 Response regulator receiver domain RPE_RS11685 PF13545 Crp-like helix-turn-helix domain RPE_RS11690 PF07310 RPE_RS11690 RPE_RS11695 PF01694 Rhomboid family RPE_RS11700 PF00571 CBS domain RPE_RS11705 PF01734 Patatin-like phospholipase RPE_RS11715 PF00563 EAL domain RPE_RS11715 PF00990 GGDEF domain RPE_RS11715 PF13188 PAS domain RPE_RS11720 PF00881 Nitroreductase family RPE_RS11730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPE_RS11730 PF02824 TGS domain RPE_RS11730 PF03129 Anticodon binding domain RPE_RS11730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPE_RS11735 PF14096 RPE_RS11735 RPE_RS11740 PF07690 Major Facilitator Superfamily RPE_RS11745 PF13578 Methyltransferase domain RPE_RS11750 PF00440 Bacterial regulatory proteins, tetR family RPE_RS11755 PF12098 RPE_RS11755 RPE_RS11760 PF01809 RPE_RS11760 RPE_RS11770 PF08843 Nucleotidyl transferase of unknown function (DUF1814) RPE_RS11780 PF01592 NifU-like N terminal domain RPE_RS11785 PF01227 GTP cyclohydrolase I RPE_RS11790 PF01502 Phosphoribosyl-AMP cyclohydrolase RPE_RS11795 PF00173 Cytochrome b5-like Heme/Steroid binding domain RPE_RS11800 PF00175 Oxidoreductase NAD-binding domain RPE_RS11800 PF01794 RPE_RS11800 RPE_RS11800 PF08022 RPE_RS11800 RPE_RS11815 PF01464 Transglycosylase SLT domain RPE_RS11820 PF10098 RPE_RS11820 RPE_RS11825 PF01627 Hpt domain RPE_RS11830 PF00072 Response regulator receiver domain RPE_RS11835 PF00672 HAMP domain RPE_RS11835 PF00990 GGDEF domain RPE_RS11840 PF01513 ATP-NAD kinase RPE_RS11845 PF13424 Tetratricopeptide repeat RPE_RS11855 PF13505 Outer membrane protein beta-barrel domain RPE_RS11860 PF00313 'Cold-shock' DNA-binding domain RPE_RS11890 PF01757 RPE_RS11890 RPE_RS11910 PF00108 Thiolase, N-terminal domain RPE_RS11910 PF02803 Thiolase, C-terminal domain RPE_RS11915 PF00501 AMP-binding enzyme RPE_RS11915 PF13193 AMP-binding enzyme C-terminal domain RPE_RS11925 PF13380 CoA binding domain RPE_RS11925 PF13549 ATP-grasp domain RPE_RS11925 PF13607 Succinyl-CoA ligase like flavodoxin domain RPE_RS11930 PF00106 short chain dehydrogenase RPE_RS11935 PF00364 Biotin-requiring enzyme RPE_RS11940 PF01614 Bacterial transcriptional regulator RPE_RS11940 PF09339 IclR helix-turn-helix domain RPE_RS11945 PF01039 Carboxyl transferase domain RPE_RS11950 PF00440 Bacterial regulatory proteins, tetR family RPE_RS11955 PF00171 Aldehyde dehydrogenase family RPE_RS11970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS11970 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS11970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS11975 PF16113 RPE_RS11975 RPE_RS11980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPE_RS11980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RPE_RS11985 PF00501 AMP-binding enzyme RPE_RS11985 PF13193 AMP-binding enzyme C-terminal domain RPE_RS11990 PF01575 MaoC like domain RPE_RS11995 PF00106 short chain dehydrogenase RPE_RS12000 PF03486 HI0933-like protein RPE_RS12005 PF00005 ABC transporter RPE_RS12005 PF16326 RPE_RS12005 RPE_RS12010 PF02639 RPE_RS12010 RPE_RS12015 PF00082 Subtilase family RPE_RS12015 PF03797 Autotransporter beta-domain RPE_RS12020 PF00186 Dihydrofolate reductase RPE_RS12025 PF01522 Polysaccharide deacetylase RPE_RS12030 PF00255 Glutathione peroxidase RPE_RS12035 PF03734 L,D-transpeptidase catalytic domain RPE_RS12040 PF05981 RPE_RS12040 RPE_RS12055 PF07568 RPE_RS12055 RPE_RS12065 PF03061 Thioesterase superfamily RPE_RS12070 PF00583 Acetyltransferase (GNAT) family RPE_RS12080 PF02308 RPE_RS12080 RPE_RS12090 PF08238 Sel1 repeat RPE_RS12095 PF09939 RPE_RS12095 RPE_RS12100 PF13350 Tyrosine phosphatase family RPE_RS12105 PF02517 CAAX protease self-immunity RPE_RS12115 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS12115 PF05227 CHASE3 domain RPE_RS12120 PF03358 NADPH-dependent FMN reductase RPE_RS12125 PF01545 Cation efflux family RPE_RS12140 PF00556 Antenna complex alpha/beta subunit RPE_RS12175 PF13271 RPE_RS12175 RPE_RS12180 PF06527 RPE_RS12180 RPE_RS12185 PF05621 RPE_RS12185 RPE_RS12190 PF00665 Integrase core domain RPE_RS12190 PF09299 Mu transposase, C-terminal RPE_RS12215 PF01527 Transposase RPE_RS12220 PF05717 RPE_RS12220 RPE_RS12225 PF03050 RPE_RS12225 RPE_RS12225 PF13005 RPE_RS12225 RPE_RS12225 PF13007 RPE_RS12225 RPE_RS12225 PF13817 RPE_RS12225 RPE_RS12270 PF05099 Tellurite resistance protein TerB RPE_RS12270 PF13208 RPE_RS12270 RPE_RS12270 PF15615 RPE_RS12270 RPE_RS12275 PF10923 RPE_RS12275 RPE_RS12280 PF00270 DEAD/DEAH box helicase RPE_RS12280 PF00271 Helicase conserved C-terminal domain RPE_RS12290 PF12849 PBP superfamily domain RPE_RS12295 PF00563 EAL domain RPE_RS12295 PF00990 GGDEF domain RPE_RS12305 PF04940 Sensors of blue-light using FAD RPE_RS12325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS12325 PF00672 HAMP domain RPE_RS12325 PF17200 RPE_RS12325 RPE_RS12330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS12330 PF00672 HAMP domain RPE_RS12335 PF00563 EAL domain RPE_RS12335 PF00990 GGDEF domain RPE_RS12365 PF01909 Nucleotidyltransferase domain RPE_RS12380 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS12390 PF13560 Helix-turn-helix domain RPE_RS12395 PF06114 Domain of unknown function (DUF955) RPE_RS12400 PF00929 Exonuclease RPE_RS12400 PF08411 Exonuclease C-terminal RPE_RS12410 PF13538 UvrD-like helicase C-terminal domain RPE_RS12410 PF13604 AAA domain RPE_RS12435 PF00589 Phage integrase family RPE_RS12445 PF02463 RecF/RecN/SMC N terminal domain RPE_RS12450 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS12455 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS12455 PF01434 Peptidase family M41 RPE_RS12465 PF01381 Helix-turn-helix RPE_RS12470 PF14022 RPE_RS12470 RPE_RS12475 PF13020 RPE_RS12475 RPE_RS12490 PF01734 Patatin-like phospholipase RPE_RS12515 PF06114 Domain of unknown function (DUF955) RPE_RS12520 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) RPE_RS12535 PF00270 DEAD/DEAH box helicase RPE_RS12535 PF00271 Helicase conserved C-terminal domain RPE_RS12535 PF00656 Caspase domain RPE_RS12540 PF02867 Ribonucleotide reductase, barrel domain RPE_RS12540 PF08471 RPE_RS12540 RPE_RS12545 PF00892 EamA-like transporter family RPE_RS12560 PF00120 Glutamine synthetase, catalytic domain RPE_RS12560 PF03951 Glutamine synthetase, beta-Grasp domain RPE_RS12565 PF00543 Nitrogen regulatory protein P-II RPE_RS12570 PF01256 Carbohydrate kinase RPE_RS12570 PF03853 YjeF-related protein N-terminus RPE_RS12575 PF00394 Multicopper oxidase RPE_RS12575 PF07731 Multicopper oxidase RPE_RS12585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPE_RS12585 PF05697 Bacterial trigger factor protein (TF) RPE_RS12585 PF05698 Bacterial trigger factor protein (TF) C-terminus RPE_RS12590 PF00574 Clp protease RPE_RS12595 PF06689 ClpX C4-type zinc finger RPE_RS12595 PF07724 AAA domain (Cdc48 subfamily) RPE_RS12595 PF10431 C-terminal, D2-small domain, of ClpB protein RPE_RS12600 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS12600 PF02190 ATP-dependent protease La (LON) domain RPE_RS12600 PF05362 Lon protease (S16) C-terminal proteolytic domain RPE_RS12605 PF14096 RPE_RS12605 RPE_RS12615 PF00873 AcrB/AcrD/AcrF family RPE_RS12620 PF16576 RPE_RS12620 RPE_RS12625 PF01546 Peptidase family M20/M25/M40 RPE_RS12625 PF07687 Peptidase dimerisation domain RPE_RS12630 PF00216 Bacterial DNA-binding protein RPE_RS12640 PF00515 Tetratricopeptide repeat RPE_RS12640 PF13181 Tetratricopeptide repeat RPE_RS12640 PF13414 TPR repeat RPE_RS12640 PF13844 Glycosyl transferase family 41 RPE_RS12645 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RPE_RS12650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPE_RS12655 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RPE_RS12660 PF05635 23S rRNA-intervening sequence protein RPE_RS12665 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RPE_RS12670 PF05050 Methyltransferase FkbM domain RPE_RS12675 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RPE_RS12680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RPE_RS12680 PF10531 SLBB domain RPE_RS12680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPE_RS12690 PF00384 Molybdopterin oxidoreductase RPE_RS12690 PF09326 RPE_RS12690 RPE_RS12690 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPE_RS12690 PF13510 2Fe-2S iron-sulfur cluster binding domain RPE_RS12695 PF00146 NADH dehydrogenase RPE_RS12700 PF12838 4Fe-4S dicluster domain RPE_RS12705 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RPE_RS12710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RPE_RS12715 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS12715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RPE_RS12720 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS12720 PF01059 RPE_RS12720 RPE_RS12725 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS12730 PF03099 Biotin/lipoate A/B protein ligase family RPE_RS12735 PF07521 RNA-metabolising metallo-beta-lactamase RPE_RS12735 PF12706 Beta-lactamase superfamily domain RPE_RS12740 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPE_RS12745 PF07330 RPE_RS12745 RPE_RS12750 PF11162 RPE_RS12750 RPE_RS12755 PF04314 Protein of unknown function (DUF461) RPE_RS12760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPE_RS12760 PF03129 Anticodon binding domain RPE_RS12765 PF02687 RPE_RS12765 RPE_RS12765 PF12704 MacB-like periplasmic core domain RPE_RS12770 PF00005 ABC transporter RPE_RS12775 PF12071 RPE_RS12775 RPE_RS12780 PF12071 RPE_RS12780 RPE_RS12785 PF12071 RPE_RS12785 RPE_RS12790 PF02811 PHP domain RPE_RS12790 PF07733 Bacterial DNA polymerase III alpha subunit RPE_RS12790 PF14579 Helix-hairpin-helix motif RPE_RS12795 PF09957 RPE_RS12795 RPE_RS12800 PF01850 PIN domain RPE_RS12805 PF00318 Ribosomal protein S2 RPE_RS12810 PF00889 Elongation factor TS RPE_RS12815 PF00696 Amino acid kinase family RPE_RS12820 PF01765 Ribosome recycling factor RPE_RS12825 PF01255 Putative undecaprenyl diphosphate synthase RPE_RS12830 PF01148 Cytidylyltransferase family RPE_RS12835 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RPE_RS12835 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal RPE_RS12835 PF13288 DXP reductoisomerase C-terminal domain RPE_RS12840 PF02163 Peptidase family M50 RPE_RS12840 PF13180 PDZ domain RPE_RS12845 PF01103 Surface antigen RPE_RS12845 PF07244 Surface antigen variable number repeat RPE_RS12850 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS12850 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RPE_RS12855 PF07977 FabA-like domain RPE_RS12860 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS12860 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RPE_RS12865 PF06230 Protein of unknown function (DUF1009) RPE_RS12870 PF02684 RPE_RS12870 RPE_RS12875 PF00285 Citrate synthase RPE_RS12880 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPE_RS12885 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPE_RS12885 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RPE_RS12890 PF03772 RPE_RS12890 RPE_RS12890 PF13567 RPE_RS12890 RPE_RS12895 PF00717 Peptidase S24-like RPE_RS12895 PF01726 LexA DNA binding domain RPE_RS12900 PF00994 Probable molybdopterin binding domain RPE_RS12900 PF03453 MoeA N-terminal region (domain I and II) RPE_RS12900 PF03454 MoeA C-terminal region (domain IV) RPE_RS12915 PF00106 short chain dehydrogenase RPE_RS12940 PF07886 RPE_RS12940 RPE_RS12945 PF13419 Haloacid dehalogenase-like hydrolase RPE_RS12950 PF00691 OmpA family RPE_RS12950 PF13677 RPE_RS12950 RPE_RS12955 PF07238 PilZ domain RPE_RS12960 PF00122 E1-E2 ATPase RPE_RS12960 PF00689 Cation transporting ATPase, C-terminus RPE_RS12960 PF00690 Cation transporter/ATPase, N-terminus RPE_RS12960 PF00702 haloacid dehalogenase-like hydrolase RPE_RS12965 PF00011 Hsp20/alpha crystallin family RPE_RS12980 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS12980 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RPE_RS12985 PF01967 MoaC family RPE_RS12990 PF00218 Indole-3-glycerol phosphate synthase RPE_RS12995 PF00591 Glycosyl transferase family, a/b domain RPE_RS12995 PF02885 Glycosyl transferase family, helical bundle domain RPE_RS13000 PF13145 PPIC-type PPIASE domain RPE_RS13000 PF13624 SurA N-terminal domain RPE_RS13005 PF00121 Triosephosphate isomerase RPE_RS13010 PF03840 Preprotein translocase SecG subunit RPE_RS13015 PF00117 Glutamine amidotransferase class-I RPE_RS13015 PF06418 CTP synthase N-terminus RPE_RS13020 PF06748 Protein of unknown function (DUF1217) RPE_RS13025 PF05488 PAAR motif RPE_RS13030 PF14384 RPE_RS13030 RPE_RS13040 PF13468 Glyoxalase-like domain RPE_RS13045 PF00793 DAHP synthetase I family RPE_RS13050 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS13050 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B RPE_RS13050 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RPE_RS13055 PF01590 GAF domain RPE_RS13055 PF12728 Helix-turn-helix domain RPE_RS13065 PF00732 GMC oxidoreductase RPE_RS13065 PF05199 GMC oxidoreductase RPE_RS13070 PF14489 QueF-like protein RPE_RS13075 PF00113 Enolase, C-terminal TIM barrel domain RPE_RS13075 PF03952 Enolase, N-terminal domain RPE_RS13085 PF01810 RPE_RS13085 RPE_RS13090 PF03358 NADPH-dependent FMN reductase RPE_RS13095 PF04977 Septum formation initiator RPE_RS13100 PF00676 Dehydrogenase E1 component RPE_RS13110 PF00364 Biotin-requiring enzyme RPE_RS13110 PF02779 Transketolase, pyrimidine binding domain RPE_RS13110 PF02780 Transketolase, C-terminal domain RPE_RS13115 PF16826 RPE_RS13115 RPE_RS13120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPE_RS13120 PF00364 Biotin-requiring enzyme RPE_RS13120 PF02817 e3 binding domain RPE_RS13130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPE_RS13130 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS13135 PF14235 RPE_RS13135 RPE_RS13145 PF08238 Sel1 repeat RPE_RS13150 PF03372 Endonuclease/Exonuclease/phosphatase family RPE_RS13155 PF16576 RPE_RS13155 RPE_RS13160 PF00873 AcrB/AcrD/AcrF family RPE_RS13165 PF02931 Neurotransmitter-gated ion-channel ligand binding domain RPE_RS13170 PF14827 Sensory domain of two-component sensor kinase RPE_RS13175 PF04255 Protein of unknown function (DUF433) RPE_RS13180 PF01521 Iron-sulphur cluster biosynthesis RPE_RS13185 PF01966 HD domain RPE_RS13185 PF13286 Phosphohydrolase-associated domain RPE_RS13195 PF02530 RPE_RS13195 RPE_RS13200 PF01464 Transglycosylase SLT domain RPE_RS13205 PF07886 RPE_RS13205 RPE_RS13210 PF05071 RPE_RS13210 RPE_RS13225 PF04542 Sigma-70 region 2 RPE_RS13225 PF08281 Sigma-70, region 4 RPE_RS13230 PF04773 FecR protein RPE_RS13230 PF16220 RPE_RS13230 RPE_RS13230 PF16344 RPE_RS13230 RPE_RS13235 PF05860 haemagglutination activity domain RPE_RS13235 PF12545 RPE_RS13235 RPE_RS13245 PF07724 AAA domain (Cdc48 subfamily) RPE_RS13270 PF04542 Sigma-70 region 2 RPE_RS13270 PF08281 Sigma-70, region 4 RPE_RS13275 PF04773 FecR protein RPE_RS13275 PF16220 RPE_RS13275 RPE_RS13275 PF16344 RPE_RS13275 RPE_RS13280 PF05860 haemagglutination activity domain RPE_RS13280 PF12545 RPE_RS13280 RPE_RS13285 PF13103 TonB C terminal RPE_RS13290 PF04542 Sigma-70 region 2 RPE_RS13290 PF08281 Sigma-70, region 4 RPE_RS13295 PF04773 FecR protein RPE_RS13295 PF16220 RPE_RS13295 RPE_RS13300 PF05860 haemagglutination activity domain RPE_RS13300 PF12545 RPE_RS13300 RPE_RS13305 PF13683 RPE_RS13305 RPE_RS13310 PF07660 Secretin and TonB N terminus short domain RPE_RS13315 PF04542 Sigma-70 region 2 RPE_RS13315 PF08281 Sigma-70, region 4 RPE_RS13320 PF04773 FecR protein RPE_RS13320 PF16220 RPE_RS13320 RPE_RS13320 PF16344 RPE_RS13320 RPE_RS13325 PF05860 haemagglutination activity domain RPE_RS13325 PF12545 RPE_RS13325 RPE_RS13345 PF08334 Type II secretion system (T2SS), protein G RPE_RS13345 PF13544 RPE_RS13345 RPE_RS13350 PF00482 Type II secretion system (T2SS), protein F RPE_RS13355 PF00437 Type II/IV secretion system protein RPE_RS13355 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RPE_RS13365 PF10741 RPE_RS13365 RPE_RS13370 PF05137 RPE_RS13370 RPE_RS13375 PF03934 Type II secretion system (T2SS), protein K RPE_RS13385 PF00263 RPE_RS13385 RPE_RS13385 PF03958 Bacterial type II/III secretion system short domain RPE_RS13395 PF13432 Tetratricopeptide repeat RPE_RS13395 PF13844 Glycosyl transferase family 41 RPE_RS13400 PF12849 PBP superfamily domain RPE_RS13405 PF16363 RPE_RS13405 RPE_RS13430 PF00491 Arginase family RPE_RS13450 PF00316 Fructose-1-6-bisphosphatase RPE_RS13455 PF00485 Phosphoribulokinase / Uridine kinase family RPE_RS13460 PF00456 Transketolase, thiamine diphosphate binding domain RPE_RS13460 PF02779 Transketolase, pyrimidine binding domain RPE_RS13460 PF02780 Transketolase, C-terminal domain RPE_RS13465 PF01116 Fructose-bisphosphate aldolase class-II RPE_RS13470 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RPE_RS13470 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain RPE_RS13475 PF13419 Haloacid dehalogenase-like hydrolase RPE_RS13480 PF04892 RPE_RS13480 RPE_RS13490 PF11519 Protein of unknown function (DUF3222) RPE_RS13500 PF00750 tRNA synthetases class I (R) RPE_RS13500 PF03485 Arginyl tRNA synthetase N terminal domain RPE_RS13500 PF05746 DALR anticodon binding domain RPE_RS13505 PF05036 Sporulation related domain RPE_RS13510 PF00933 Glycosyl hydrolase family 3 N terminal domain RPE_RS13515 PF02616 ScpA/B protein RPE_RS13520 PF04079 Putative transcriptional regulators (Ypuh-like) RPE_RS13525 PF02416 mttA/Hcf106 family RPE_RS13530 PF02416 mttA/Hcf106 family RPE_RS13535 PF00902 Sec-independent protein translocase protein (TatC) RPE_RS13545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPE_RS13545 PF02403 Seryl-tRNA synthetase N-terminal domain RPE_RS13560 PF01975 Survival protein SurE RPE_RS13565 PF00072 Response regulator receiver domain RPE_RS13570 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RPE_RS13575 PF01476 LysM domain RPE_RS13575 PF01551 Peptidase family M23 RPE_RS13580 PF06803 RPE_RS13580 RPE_RS13585 PF01329 Pterin 4 alpha carbinolamine dehydratase RPE_RS13590 PF16868 RPE_RS13590 RPE_RS13595 PF00009 Elongation factor Tu GTP binding domain RPE_RS13595 PF00679 Elongation factor G C-terminus RPE_RS13595 PF03144 Elongation factor Tu domain 2 RPE_RS13600 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPE_RS13610 PF00556 Antenna complex alpha/beta subunit RPE_RS13615 PF00556 Antenna complex alpha/beta subunit RPE_RS13630 PF13683 RPE_RS13630 RPE_RS13635 PF07660 Secretin and TonB N terminus short domain RPE_RS13640 PF08281 Sigma-70, region 4 RPE_RS13645 PF04773 FecR protein RPE_RS13645 PF16220 RPE_RS13645 RPE_RS13645 PF16344 RPE_RS13645 RPE_RS13650 PF05860 haemagglutination activity domain RPE_RS13650 PF12545 RPE_RS13650 RPE_RS13660 PF00207 Alpha-2-macroglobulin family RPE_RS13660 PF01835 MG2 domain RPE_RS13660 PF07703 Alpha-2-macroglobulin family N-terminal region RPE_RS13660 PF11974 Alpha-2-macroglobulin MG1 domain RPE_RS13665 PF00905 Penicillin binding protein transpeptidase domain RPE_RS13665 PF00912 Transglycosylase RPE_RS13665 PF06832 RPE_RS13665 RPE_RS13675 PF01569 PAP2 superfamily RPE_RS13680 PF00535 Glycosyl transferase family 2 RPE_RS13685 PF07578 Lipid A Biosynthesis N-terminal domain RPE_RS13690 PF01053 Cys/Met metabolism PLP-dependent enzyme RPE_RS13695 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPE_RS13700 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS13705 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS13710 PF00005 ABC transporter RPE_RS13720 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS13725 PF02353 Mycolic acid cyclopropane synthetase RPE_RS13730 PF07103 RPE_RS13730 RPE_RS13735 PF01593 Flavin containing amine oxidoreductase RPE_RS13740 PF02321 Outer membrane efflux protein RPE_RS13745 PF16576 RPE_RS13745 RPE_RS13750 PF00873 AcrB/AcrD/AcrF family RPE_RS13755 PF00873 AcrB/AcrD/AcrF family RPE_RS13760 PF03942 RPE_RS13760 RPE_RS13795 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RPE_RS13800 PF02321 Outer membrane efflux protein RPE_RS13805 PF10691 RPE_RS13805 RPE_RS13810 PF00133 tRNA synthetases class I (I, L, M and V) RPE_RS13810 PF08264 Anticodon-binding domain of tRNA RPE_RS13810 PF10458 Valyl tRNA synthetase tRNA binding arm RPE_RS13815 PF02245 Methylpurine-DNA glycosylase (MPG) RPE_RS13820 PF04055 Radical SAM superfamily RPE_RS13825 PF03364 Polyketide cyclase / dehydrase and lipid transport RPE_RS13830 PF02464 Competence-damaged protein RPE_RS13835 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RPE_RS13835 PF02542 YgbB family RPE_RS13840 PF01207 Dihydrouridine synthase (Dus) RPE_RS13845 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS13845 PF00989 PAS fold RPE_RS13845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS13850 PF00072 Response regulator receiver domain RPE_RS13850 PF00158 Sigma-54 interaction domain RPE_RS13850 PF02954 Bacterial regulatory protein, Fis family RPE_RS13855 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS13855 PF00672 HAMP domain RPE_RS13855 PF00989 PAS fold RPE_RS13855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS13860 PF00072 Response regulator receiver domain RPE_RS13860 PF00158 Sigma-54 interaction domain RPE_RS13860 PF02954 Bacterial regulatory protein, Fis family RPE_RS13865 PF01063 Aminotransferase class IV RPE_RS13875 PF01926 50S ribosome-binding GTPase RPE_RS13875 PF13167 RPE_RS13875 RPE_RS13875 PF16360 RPE_RS13875 RPE_RS13880 PF00521 DNA gyrase/topoisomerase IV, subunit A RPE_RS13880 PF03989 DNA gyrase C-terminal domain, beta-propeller RPE_RS13890 PF01467 Cytidylyltransferase RPE_RS13895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RPE_RS13905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RPE_RS13910 PF02547 Queuosine biosynthesis protein RPE_RS13915 PF01702 Queuine tRNA-ribosyltransferase RPE_RS13925 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS13930 PF14384 RPE_RS13930 RPE_RS13945 PF01391 Collagen triple helix repeat (20 copies) RPE_RS13965 PF13641 Glycosyltransferase like family 2 RPE_RS13990 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS13990 PF12804 MobA-like NTP transferase domain RPE_RS13995 PF01380 SIS domain RPE_RS13995 PF13522 Glutamine amidotransferase domain RPE_RS14000 PF04367 RPE_RS14000 RPE_RS14005 PF00270 DEAD/DEAH box helicase RPE_RS14005 PF00271 Helicase conserved C-terminal domain RPE_RS14005 PF17191 RPE_RS14005 RPE_RS14010 PF03937 Flavinator of succinate dehydrogenase RPE_RS14015 PF00270 DEAD/DEAH box helicase RPE_RS14015 PF00271 Helicase conserved C-terminal domain RPE_RS14015 PF02559 CarD-like/TRCF domain RPE_RS14015 PF03461 TRCF domain RPE_RS14025 PF00501 AMP-binding enzyme RPE_RS14030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPE_RS14035 PF06776 Invasion associated locus B (IalB) protein RPE_RS14040 PF08755 Hemimethylated DNA-binding protein YccV like RPE_RS14045 PF03547 RPE_RS14045 RPE_RS14050 PF01494 FAD binding domain RPE_RS14060 PF03741 RPE_RS14060 RPE_RS14065 PF00107 Zinc-binding dehydrogenase RPE_RS14065 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS14075 PF13304 AAA domain RPE_RS14080 PF05016 Plasmid stabilisation system protein RPE_RS14090 PF07704 RPE_RS14090 RPE_RS14095 PF04014 Antidote-toxin recognition MazE RPE_RS14100 PF13676 TIR domain RPE_RS14105 PF00106 short chain dehydrogenase RPE_RS14110 PF00464 Serine hydroxymethyltransferase RPE_RS14115 PF03477 ATP cone domain RPE_RS14120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RPE_RS14120 PF01872 RibD C-terminal domain RPE_RS14125 PF00677 Lumazine binding domain RPE_RS14130 PF00885 6,7-dimethyl-8-ribityllumazine synthase RPE_RS14135 PF01029 NusB family RPE_RS14140 PF00586 AIR synthase related protein, N-terminal domain RPE_RS14140 PF02769 AIR synthase related protein, C-terminal domain RPE_RS14145 PF03030 Inorganic H+ pyrophosphatase RPE_RS14150 PF00561 alpha/beta hydrolase fold RPE_RS14155 PF00593 TonB dependent receptor RPE_RS14155 PF07715 TonB-dependent Receptor Plug Domain RPE_RS14160 PF00672 HAMP domain RPE_RS14160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS14160 PF07730 Histidine kinase RPE_RS14160 PF16448 RPE_RS14160 RPE_RS14165 PF00072 Response regulator receiver domain RPE_RS14165 PF00196 Bacterial regulatory proteins, luxR family RPE_RS14170 PF00326 Prolyl oligopeptidase family RPE_RS14175 PF04355 SmpA / OmlA family RPE_RS14180 PF03981 RPE_RS14180 RPE_RS14185 PF02620 RPE_RS14185 RPE_RS14190 PF02504 Fatty acid synthesis protein RPE_RS14195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RPE_RS14195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RPE_RS14200 PF00216 Bacterial DNA-binding protein RPE_RS14205 PF13411 MerR HTH family regulatory protein RPE_RS14210 PF06738 RPE_RS14210 RPE_RS14215 PF12821 RPE_RS14215 RPE_RS14220 PF00556 Antenna complex alpha/beta subunit RPE_RS14225 PF00556 Antenna complex alpha/beta subunit RPE_RS14240 PF03367 ZPR1 zinc-finger domain RPE_RS14245 PF00027 Cyclic nucleotide-binding domain RPE_RS14245 PF13545 Crp-like helix-turn-helix domain RPE_RS14255 PF00950 RPE_RS14255 RPE_RS14260 PF00950 RPE_RS14260 RPE_RS14265 PF00005 ABC transporter RPE_RS14270 PF01297 Periplasmic solute binding protein family RPE_RS14280 PF02397 RPE_RS14280 RPE_RS14280 PF13727 CoA-binding domain RPE_RS14285 PF13579 Glycosyl transferase 4-like domain RPE_RS14285 PF13692 Glycosyl transferases group 1 RPE_RS14290 PF02563 Polysaccharide biosynthesis/export protein RPE_RS14290 PF10531 SLBB domain RPE_RS14295 PF02706 Chain length determinant protein RPE_RS14300 PF13480 Acetyltransferase (GNAT) domain RPE_RS14305 PF01522 Polysaccharide deacetylase RPE_RS14310 PF11003 RPE_RS14310 RPE_RS14315 PF02628 RPE_RS14315 RPE_RS14320 PF02641 Uncharacterized ACR, COG1993 RPE_RS14325 PF02537 RPE_RS14325 RPE_RS14330 PF02537 RPE_RS14330 RPE_RS14335 PF01053 Cys/Met metabolism PLP-dependent enzyme RPE_RS14340 PF13380 CoA binding domain RPE_RS14345 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS14350 PF03061 Thioesterase superfamily RPE_RS14355 PF00572 Ribosomal protein L13 RPE_RS14360 PF00380 Ribosomal protein S9/S16 RPE_RS14365 PF00990 GGDEF domain RPE_RS14370 PF03992 Antibiotic biosynthesis monooxygenase RPE_RS14375 PF01594 RPE_RS14375 RPE_RS14380 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel RPE_RS14385 PF00561 alpha/beta hydrolase fold RPE_RS14390 PF00768 D-alanyl-D-alanine carboxypeptidase RPE_RS14390 PF07943 Penicillin-binding protein 5, C-terminal domain RPE_RS14395 PF02223 Thymidylate kinase RPE_RS14400 PF13177 DNA polymerase III, delta subunit RPE_RS14405 PF09334 tRNA synthetases class I (M) RPE_RS14410 PF01026 TatD related DNase RPE_RS14415 PF12706 Beta-lactamase superfamily domain RPE_RS14420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS14420 PF03466 LysR substrate binding domain RPE_RS14425 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS14430 PF00083 Sugar (and other) transporter RPE_RS14435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPE_RS14440 PF00501 AMP-binding enzyme RPE_RS14440 PF13193 AMP-binding enzyme C-terminal domain RPE_RS14445 PF04290 RPE_RS14445 RPE_RS14445 PF06808 RPE_RS14445 RPE_RS14450 PF03480 Bacterial extracellular solute-binding protein, family 7 RPE_RS14455 PF00884 Sulfatase RPE_RS14460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS14460 PF03466 LysR substrate binding domain RPE_RS14465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS14465 PF00672 HAMP domain RPE_RS14465 PF12729 RPE_RS14465 RPE_RS14470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS14470 PF00672 HAMP domain RPE_RS14470 PF17202 RPE_RS14470 RPE_RS14475 PF00580 UvrD/REP helicase N-terminal domain RPE_RS14475 PF13361 UvrD-like helicase C-terminal domain RPE_RS14485 PF08803 Putative mono-oxygenase ydhR RPE_RS14490 PF06508 Queuosine biosynthesis protein QueC RPE_RS14495 PF03819 MazG nucleotide pyrophosphohydrolase domain RPE_RS14500 PF00571 CBS domain RPE_RS14500 PF01595 RPE_RS14500 RPE_RS14500 PF03471 Transporter associated domain RPE_RS14510 PF00436 Single-strand binding protein family RPE_RS14515 PF13505 Outer membrane protein beta-barrel domain RPE_RS14520 PF00005 ABC transporter RPE_RS14540 PF12883 Protein of unknown function (DUF3828) RPE_RS14555 PF07885 Ion channel RPE_RS14565 PF14542 GCN5-related N-acetyl-transferase RPE_RS14570 PF12200 Domain of unknown function (DUF3597) RPE_RS14575 PF09955 RPE_RS14575 RPE_RS14580 PF01134 Glucose inhibited division protein A RPE_RS14585 PF00494 Squalene/phytoene synthase RPE_RS14590 PF04430 Protein of unknown function (DUF498/DUF598) RPE_RS14595 PF02355 Protein export membrane protein RPE_RS14595 PF07549 SecD/SecF GG Motif RPE_RS14600 PF02355 Protein export membrane protein RPE_RS14600 PF07549 SecD/SecF GG Motif RPE_RS14605 PF02699 Preprotein translocase subunit RPE_RS14610 PF05673 Protein of unknown function (DUF815) RPE_RS14615 PF00682 HMGL-like RPE_RS14620 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RPE_RS14620 PF00364 Biotin-requiring enzyme RPE_RS14620 PF02785 Biotin carboxylase C-terminal domain RPE_RS14620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPE_RS14625 PF01039 Carboxyl transferase domain RPE_RS14630 PF04800 ETC complex I subunit conserved region RPE_RS14635 PF10129 RPE_RS14635 RPE_RS14640 PF01212 Beta-eliminating lyase RPE_RS14645 PF01278 Omptin family RPE_RS14645 PF13505 Outer membrane protein beta-barrel domain RPE_RS14655 PF02643 Uncharacterized ACR, COG1430 RPE_RS14660 PF00313 'Cold-shock' DNA-binding domain RPE_RS14665 PF02146 Sir2 family RPE_RS14670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPE_RS14675 PF07238 PilZ domain RPE_RS14690 PF12071 RPE_RS14690 RPE_RS14700 PF03729 RPE_RS14700 RPE_RS14715 PF04055 Radical SAM superfamily RPE_RS14715 PF13353 4Fe-4S single cluster domain RPE_RS14720 PF00152 tRNA synthetases class II (D, K and N) RPE_RS14725 PF01132 Elongation factor P (EF-P) OB domain RPE_RS14725 PF08207 Elongation factor P (EF-P) KOW-like domain RPE_RS14725 PF09285 Elongation factor P, C-terminal RPE_RS14730 PF01551 Peptidase family M23 RPE_RS14735 PF01471 Putative peptidoglycan binding domain RPE_RS14735 PF13406 Transglycosylase SLT domain RPE_RS14740 PF13515 RPE_RS14740 RPE_RS14745 PF01368 DHH family RPE_RS14745 PF02272 DHHA1 domain RPE_RS14750 PF13419 Haloacid dehalogenase-like hydrolase RPE_RS14755 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RPE_RS14760 PF00742 Homoserine dehydrogenase RPE_RS14760 PF01842 ACT domain RPE_RS14760 PF03447 Homoserine dehydrogenase, NAD binding domain RPE_RS14765 PF00155 Aminotransferase class I and II RPE_RS14775 PF00561 alpha/beta hydrolase fold RPE_RS14775 PF07167 RPE_RS14775 RPE_RS14780 PF00563 EAL domain RPE_RS14780 PF00990 GGDEF domain RPE_RS14780 PF03707 RPE_RS14780 RPE_RS14780 PF12860 RPE_RS14780 RPE_RS14790 PF13489 Methyltransferase domain RPE_RS14795 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPE_RS14800 PF09335 RPE_RS14800 RPE_RS14805 PF00204 DNA gyrase B RPE_RS14805 PF00986 DNA gyrase B subunit, carboxyl terminus RPE_RS14805 PF01751 Toprim domain RPE_RS14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS14810 PF02630 SCO1/SenC RPE_RS14815 PF04314 Protein of unknown function (DUF461) RPE_RS14820 PF10634 Fe2+ transport protein RPE_RS14825 PF13687 RPE_RS14825 RPE_RS14850 PF00656 Caspase domain RPE_RS14855 PF00593 TonB dependent receptor RPE_RS14855 PF07715 TonB-dependent Receptor Plug Domain RPE_RS14865 PF00270 DEAD/DEAH box helicase RPE_RS14865 PF00271 Helicase conserved C-terminal domain RPE_RS14870 PF00990 GGDEF domain RPE_RS14875 PF05598 RPE_RS14875 RPE_RS14875 PF13751 RPE_RS14875 RPE_RS14880 PF01521 Iron-sulphur cluster biosynthesis RPE_RS14885 PF01883 Domain of unknown function DUF59 RPE_RS14890 PF00266 Aminotransferase class-V RPE_RS14895 PF01458 Uncharacterized protein family (UPF0051) RPE_RS14900 PF00005 ABC transporter RPE_RS14910 PF01458 Uncharacterized protein family (UPF0051) RPE_RS14915 PF00266 Aminotransferase class-V RPE_RS14920 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RPE_RS14925 PF03702 Uncharacterised protein family (UPF0075) RPE_RS14930 PF00579 tRNA synthetases class I (W and Y) RPE_RS14935 PF13116 RPE_RS14935 RPE_RS14940 PF00578 AhpC/TSA family RPE_RS14945 PF01551 Peptidase family M23 RPE_RS14950 PF00472 RF-1 domain RPE_RS14950 PF03462 PCRF domain RPE_RS14955 PF00905 Penicillin binding protein transpeptidase domain RPE_RS14955 PF00912 Transglycosylase RPE_RS14955 PF17092 RPE_RS14955 RPE_RS14960 PF01520 N-acetylmuramoyl-L-alanine amidase RPE_RS14960 PF11741 AMIN domain RPE_RS14965 PF10150 Ribonuclease E/G family RPE_RS14970 PF00155 Aminotransferase class I and II RPE_RS14975 PF01435 Peptidase family M48 RPE_RS14985 PF01323 DSBA-like thioredoxin domain RPE_RS14995 PF06823 RPE_RS14995 RPE_RS15000 PF01220 Dehydroquinase class II RPE_RS15005 PF00364 Biotin-requiring enzyme RPE_RS15010 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RPE_RS15010 PF02785 Biotin carboxylase C-terminal domain RPE_RS15010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPE_RS15015 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS15015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS15015 PF05227 CHASE3 domain RPE_RS15020 PF00072 Response regulator receiver domain RPE_RS15025 PF00072 Response regulator receiver domain RPE_RS15025 PF07568 RPE_RS15025 RPE_RS15025 PF13581 Histidine kinase-like ATPase domain RPE_RS15035 PF04055 Radical SAM superfamily RPE_RS15040 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RPE_RS15045 PF09923 RPE_RS15045 RPE_RS15050 PF07859 alpha/beta hydrolase fold RPE_RS15060 PF13505 Outer membrane protein beta-barrel domain RPE_RS15065 PF06736 RPE_RS15065 RPE_RS15070 PF00211 Adenylate and Guanylate cyclase catalytic domain RPE_RS15070 PF05226 RPE_RS15070 RPE_RS15080 PF04773 FecR protein RPE_RS15085 PF13432 Tetratricopeptide repeat RPE_RS15090 PF07813 LTXXQ motif family protein RPE_RS15105 PF13463 Winged helix DNA-binding domain RPE_RS15115 PF00490 Delta-aminolevulinic acid dehydratase RPE_RS15120 PF06271 RPE_RS15120 RPE_RS15125 PF04376 RPE_RS15125 RPE_RS15125 PF04377 RPE_RS15125 RPE_RS15130 PF04226 RPE_RS15130 RPE_RS15135 PF04832 SOUL heme-binding protein RPE_RS15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS15140 PF07568 RPE_RS15140 RPE_RS15140 PF13185 GAF domain RPE_RS15145 PF01566 RPE_RS15145 RPE_RS15155 PF00521 DNA gyrase/topoisomerase IV, subunit A RPE_RS15155 PF03989 DNA gyrase C-terminal domain, beta-propeller RPE_RS15160 PF02565 Recombination protein O C terminal RPE_RS15160 PF11967 Recombination protein O N terminal RPE_RS15165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS15165 PF00672 HAMP domain RPE_RS15165 PF12729 RPE_RS15165 RPE_RS15175 PF01926 50S ribosome-binding GTPase RPE_RS15175 PF07650 KH domain RPE_RS15180 PF00035 Double-stranded RNA binding motif RPE_RS15180 PF14622 Ribonuclease-III-like RPE_RS15185 PF00717 Peptidase S24-like RPE_RS15190 PF01648 4'-phosphopantetheinyl transferase superfamily RPE_RS15195 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RPE_RS15200 PF02824 TGS domain RPE_RS15200 PF04607 Region found in RelA / SpoT proteins RPE_RS15200 PF13291 ACT domain RPE_RS15200 PF13328 HD domain RPE_RS15205 PF01192 RNA polymerase Rpb6 RPE_RS15210 PF01936 NYN domain RPE_RS15215 PF03167 Uracil DNA glycosylase superfamily RPE_RS15220 PF01668 SmpB protein RPE_RS15225 PF01741 Large-conductance mechanosensitive channel, MscL RPE_RS15230 PF00701 Dihydrodipicolinate synthetase family RPE_RS15235 PF02082 Transcriptional regulator RPE_RS15240 PF08241 Methyltransferase domain RPE_RS15245 PF07883 Cupin domain RPE_RS15250 PF03737 Demethylmenaquinone methyltransferase RPE_RS15255 PF02682 Allophanate hydrolase subunit 1 RPE_RS15260 PF02626 Allophanate hydrolase subunit 2 RPE_RS15265 PF03746 LamB/YcsF family RPE_RS15270 PF00919 Uncharacterized protein family UPF0004 RPE_RS15270 PF04055 Radical SAM superfamily RPE_RS15275 PF03976 Polyphosphate kinase 2 (PPK2) RPE_RS15280 PF01609 Transposase DDE domain RPE_RS15280 PF05598 RPE_RS15280 RPE_RS15290 PF00009 Elongation factor Tu GTP binding domain RPE_RS15290 PF03144 Elongation factor Tu domain 2 RPE_RS15290 PF16658 RPE_RS15290 RPE_RS15295 PF00893 Small Multidrug Resistance protein RPE_RS15300 PF01384 RPE_RS15300 RPE_RS15305 PF01865 Protein of unknown function DUF47 RPE_RS15310 PF14362 RPE_RS15310 RPE_RS15320 PF02653 RPE_RS15320 RPE_RS15325 PF02653 RPE_RS15325 RPE_RS15330 PF13458 Periplasmic binding protein RPE_RS15335 PF00005 ABC transporter RPE_RS15340 PF00005 ABC transporter RPE_RS15340 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS15350 PF00224 Pyruvate kinase, barrel domain RPE_RS15355 PF03960 ArsC family RPE_RS15360 PF10756 RPE_RS15360 RPE_RS15365 PF04012 RPE_RS15365 RPE_RS15370 PF04011 LemA family RPE_RS15375 PF01435 Peptidase family M48 RPE_RS15380 PF13738 Pyridine nucleotide-disulphide oxidoreductase RPE_RS15385 PF01814 Hemerythrin HHE cation binding domain RPE_RS15395 PF10006 RPE_RS15395 RPE_RS15400 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS15400 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding RPE_RS15405 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS15405 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding RPE_RS15415 PF04143 RPE_RS15415 RPE_RS15420 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPE_RS15425 PF00174 Oxidoreductase molybdopterin binding domain RPE_RS15425 PF03404 Mo-co oxidoreductase dimerisation domain RPE_RS15430 PF02872 5'-nucleotidase, C-terminal domain RPE_RS15435 PF08770 Sulphur oxidation protein SoxZ RPE_RS15440 PF13501 Sulfur oxidation protein SoxY RPE_RS15450 PF00034 Cytochrome c RPE_RS15455 PF03928 Domain of unknown function (DUF336) RPE_RS15460 PF13098 Thioredoxin-like domain RPE_RS15465 PF02683 RPE_RS15465 RPE_RS15475 PF01022 Bacterial regulatory protein, arsR family RPE_RS15480 PF04143 RPE_RS15480 RPE_RS15485 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RPE_RS15485 PF12801 RPE_RS15485 RPE_RS15485 PF13746 4Fe-4S dicluster domain RPE_RS15490 PF03595 Voltage-dependent anion channel RPE_RS15495 PF01322 Cytochrome C' RPE_RS15500 PF01292 Prokaryotic cytochrome b561 RPE_RS15505 PF09633 Protein of unknown function (DUF2023) RPE_RS15510 PF00258 Flavodoxin RPE_RS15515 PF00210 Ferritin-like domain RPE_RS15520 PF10006 RPE_RS15520 RPE_RS15530 PF04205 FMN-binding domain RPE_RS15530 PF12801 RPE_RS15530 RPE_RS15535 PF13473 Cupredoxin-like domain RPE_RS15540 PF05048 Periplasmic copper-binding protein (NosD) RPE_RS15540 PF13229 Right handed beta helix region RPE_RS15545 PF00005 ABC transporter RPE_RS15550 PF12679 RPE_RS15550 RPE_RS15555 PF05573 NosL RPE_RS15560 PF02424 ApbE family RPE_RS15565 PF01228 Glycine radical RPE_RS15565 PF02901 Pyruvate formate lyase RPE_RS15570 PF04055 Radical SAM superfamily RPE_RS15570 PF13353 4Fe-4S single cluster domain RPE_RS15575 PF13671 AAA domain RPE_RS15580 PF01979 Amidohydrolase family RPE_RS15585 PF00005 ABC transporter RPE_RS15590 PF00005 ABC transporter RPE_RS15595 PF06007 RPE_RS15595 RPE_RS15600 PF05861 RPE_RS15600 RPE_RS15605 PF05845 Bacterial phosphonate metabolism protein (PhnH) RPE_RS15610 PF06754 RPE_RS15610 RPE_RS15615 PF00392 Bacterial regulatory proteins, gntR family RPE_RS15615 PF07702 UTRA domain RPE_RS15620 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS15625 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS15630 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RPE_RS15635 PF00005 ABC transporter RPE_RS15640 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS15645 PF07969 Amidohydrolase family RPE_RS15650 PF06299 RPE_RS15650 RPE_RS15655 PF03776 Septum formation topological specificity factor MinE RPE_RS15660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS15665 PF03775 Septum formation inhibitor MinC, C-terminal domain RPE_RS15670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS15670 PF07685 CobB/CobQ-like glutamine amidotransferase domain RPE_RS15675 PF02654 RPE_RS15675 RPE_RS15680 PF04071 RPE_RS15680 RPE_RS15685 PF01497 Periplasmic binding protein RPE_RS15690 PF00005 ABC transporter RPE_RS15695 PF01032 FecCD transport family RPE_RS15700 PF10604 Polyketide cyclase / dehydrase and lipid transport RPE_RS15705 PF13519 von Willebrand factor type A domain RPE_RS15715 PF13519 von Willebrand factor type A domain RPE_RS15725 PF01882 RPE_RS15725 RPE_RS15730 PF07726 ATPase family associated with various cellular activities (AAA) RPE_RS15735 PF02315 Methanol dehydrogenase beta subunit RPE_RS15740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPE_RS15745 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPE_RS15750 PF01011 PQQ enzyme repeat RPE_RS15750 PF13360 PQQ-like domain RPE_RS15760 PF00672 HAMP domain RPE_RS15760 PF07730 Histidine kinase RPE_RS15760 PF16448 RPE_RS15760 RPE_RS15765 PF00072 Response regulator receiver domain RPE_RS15765 PF00196 Bacterial regulatory proteins, luxR family RPE_RS15770 PF01475 Ferric uptake regulator family RPE_RS15775 PF03544 Gram-negative bacterial TonB protein C-terminal RPE_RS15780 PF02472 Biopolymer transport protein ExbD/TolR RPE_RS15785 PF01618 RPE_RS15785 RPE_RS15790 PF06228 Haem utilisation ChuX/HutX RPE_RS15795 PF03992 Antibiotic biosynthesis monooxygenase RPE_RS15800 PF00593 TonB dependent receptor RPE_RS15800 PF07715 TonB-dependent Receptor Plug Domain RPE_RS15805 PF13460 NADH(P)-binding RPE_RS15810 PF04055 Radical SAM superfamily RPE_RS15815 PF10636 Hemin uptake protein hemP RPE_RS15820 PF01497 Periplasmic binding protein RPE_RS15825 PF01032 FecCD transport family RPE_RS15830 PF00005 ABC transporter RPE_RS15845 PF02582 RPE_RS15845 RPE_RS15850 PF11339 RPE_RS15850 RPE_RS15855 PF00871 Acetokinase family RPE_RS15860 PF01515 Phosphate acetyl/butaryl transferase RPE_RS15860 PF01575 MaoC like domain RPE_RS15865 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS15870 PF13420 Acetyltransferase (GNAT) domain RPE_RS15875 PF01276 Orn/Lys/Arg decarboxylase, major domain RPE_RS15875 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RPE_RS15875 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RPE_RS15885 PF01717 Cobalamin-independent synthase, Catalytic domain RPE_RS15885 PF08267 Cobalamin-independent synthase, N-terminal domain RPE_RS15890 PF02677 RPE_RS15890 RPE_RS15895 PF13714 Phosphoenolpyruvate phosphomutase RPE_RS15900 PF03061 Thioesterase superfamily RPE_RS15905 PF01381 Helix-turn-helix RPE_RS15905 PF06114 Domain of unknown function (DUF955) RPE_RS15905 PF09856 RPE_RS15905 RPE_RS15910 PF04055 Radical SAM superfamily RPE_RS15910 PF13353 4Fe-4S single cluster domain RPE_RS15915 PF13597 Anaerobic ribonucleoside-triphosphate reductase RPE_RS15920 PF03477 ATP cone domain RPE_RS15920 PF13597 Anaerobic ribonucleoside-triphosphate reductase RPE_RS15925 PF00268 Ribonucleotide reductase, small chain RPE_RS15935 PF03180 NLPA lipoprotein RPE_RS15940 PF00501 AMP-binding enzyme RPE_RS15940 PF14535 AMP-binding enzyme C-terminal domain RPE_RS15945 PF03180 NLPA lipoprotein RPE_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS15955 PF00005 ABC transporter RPE_RS15955 PF09383 NIL domain RPE_RS15960 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS15965 PF00266 Aminotransferase class-V RPE_RS15975 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS15980 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS15985 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RPE_RS15990 PF04055 Radical SAM superfamily RPE_RS15995 PF09084 NMT1/THI5 like RPE_RS16000 PF00296 Luciferase-like monooxygenase RPE_RS16005 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS16010 PF00005 ABC transporter RPE_RS16015 PF01613 Flavin reductase like domain RPE_RS16020 PF01370 NAD dependent epimerase/dehydratase family RPE_RS16025 PF01758 Sodium Bile acid symporter family RPE_RS16030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS16035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPE_RS16040 PF00205 Thiamine pyrophosphate enzyme, central domain RPE_RS16040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS16040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPE_RS16045 PF02629 CoA binding domain RPE_RS16045 PF13607 Succinyl-CoA ligase like flavodoxin domain RPE_RS16050 PF00549 CoA-ligase RPE_RS16050 PF08442 ATP-grasp domain RPE_RS16055 PF00171 Aldehyde dehydrogenase family RPE_RS16060 PF09084 NMT1/THI5 like RPE_RS16070 PF00005 ABC transporter RPE_RS16075 PF00005 ABC transporter RPE_RS16075 PF02653 RPE_RS16075 RPE_RS16075 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS16080 PF02653 RPE_RS16080 RPE_RS16085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPE_RS16090 PF13458 Periplasmic binding protein RPE_RS16095 PF02515 CoA-transferase family III RPE_RS16100 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS16100 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPE_RS16105 PF00111 2Fe-2S iron-sulfur cluster binding domain RPE_RS16105 PF01799 [2Fe-2S] binding domain RPE_RS16110 PF00941 FAD binding domain in molybdopterin dehydrogenase RPE_RS16110 PF03450 CO dehydrogenase flavoprotein C-terminal domain RPE_RS16115 PF02538 RPE_RS16115 RPE_RS16120 PF01968 Hydantoinase/oxoprolinase RPE_RS16120 PF05378 RPE_RS16120 RPE_RS16125 PF00501 AMP-binding enzyme RPE_RS16125 PF13193 AMP-binding enzyme C-terminal domain RPE_RS16130 PF00108 Thiolase, N-terminal domain RPE_RS16130 PF02803 Thiolase, C-terminal domain RPE_RS16135 PF00392 Bacterial regulatory proteins, gntR family RPE_RS16135 PF07729 FCD domain RPE_RS16145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS16145 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS16145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS16150 PF02310 B12 binding domain RPE_RS16155 PF01642 Methylmalonyl-CoA mutase RPE_RS16160 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS16160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPE_RS16165 PF01042 Endoribonuclease L-PSP RPE_RS16170 PF00501 AMP-binding enzyme RPE_RS16170 PF13193 AMP-binding enzyme C-terminal domain RPE_RS16175 PF00106 short chain dehydrogenase RPE_RS16180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPE_RS16180 PF01494 FAD binding domain RPE_RS16185 PF01047 MarR family RPE_RS16190 PF04940 Sensors of blue-light using FAD RPE_RS16205 PF01850 PIN domain RPE_RS16210 PF14280 RPE_RS16210 RPE_RS16215 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RPE_RS16225 PF05860 haemagglutination activity domain RPE_RS16225 PF12545 RPE_RS16225 RPE_RS16230 PF04773 FecR protein RPE_RS16230 PF16220 RPE_RS16230 RPE_RS16230 PF16344 RPE_RS16230 RPE_RS16235 PF04542 Sigma-70 region 2 RPE_RS16235 PF08281 Sigma-70, region 4 RPE_RS16250 PF12915 RPE_RS16250 RPE_RS16265 PF01850 PIN domain RPE_RS16285 PF10592 RPE_RS16285 RPE_RS16290 PF14390 RPE_RS16290 RPE_RS16295 PF10593 RPE_RS16295 RPE_RS16300 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS16305 PF03852 DNA mismatch endonuclease Vsr RPE_RS16310 PF00145 C-5 cytosine-specific DNA methylase RPE_RS16315 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RPE_RS16320 PF13338 RPE_RS16320 RPE_RS16325 PF08843 Nucleotidyl transferase of unknown function (DUF1814) RPE_RS16330 PF06412 RPE_RS16330 RPE_RS16335 PF06412 RPE_RS16335 RPE_RS16340 PF03389 MobA/MobL family RPE_RS16340 PF13604 AAA domain RPE_RS16345 PF05930 Prophage CP4-57 regulatory protein (AlpA) RPE_RS16350 PF00589 Phage integrase family RPE_RS16350 PF13356 Domain of unknown function (DUF4102) RPE_RS16355 PF00117 Glutamine amidotransferase class-I RPE_RS16355 PF00958 GMP synthase C terminal domain RPE_RS16355 PF02540 NAD synthase RPE_RS16360 PF01189 NOL1/NOP2/sun family RPE_RS16365 PF01124 MAPEG family RPE_RS16375 PF00107 Zinc-binding dehydrogenase RPE_RS16375 PF16884 RPE_RS16375 RPE_RS16385 PF00478 IMP dehydrogenase / GMP reductase domain RPE_RS16385 PF00571 CBS domain RPE_RS16405 PF07690 Major Facilitator Superfamily RPE_RS16410 PF01728 FtsJ-like methyltransferase RPE_RS16415 PF02541 Ppx/GppA phosphatase family RPE_RS16420 PF07681 RPE_RS16420 RPE_RS16425 PF00390 Malic enzyme, N-terminal domain RPE_RS16425 PF01515 Phosphate acetyl/butaryl transferase RPE_RS16425 PF03949 Malic enzyme, NAD binding domain RPE_RS16430 PF00152 tRNA synthetases class II (D, K and N) RPE_RS16430 PF01336 OB-fold nucleic acid binding domain RPE_RS16435 PF02696 RPE_RS16435 RPE_RS16440 PF00570 HRDC domain RPE_RS16440 PF01612 3'-5' exonuclease RPE_RS16445 PF01062 RPE_RS16445 RPE_RS16450 PF02541 Ppx/GppA phosphatase family RPE_RS16455 PF02503 Polyphosphate kinase middle domain RPE_RS16455 PF13089 Polyphosphate kinase N-terminal domain RPE_RS16455 PF13090 Polyphosphate kinase C-terminal domain RPE_RS16460 PF00308 Bacterial dnaA protein RPE_RS16465 PF01066 CDP-alcohol phosphatidyltransferase RPE_RS16470 PF00586 AIR synthase related protein, N-terminal domain RPE_RS16470 PF02769 AIR synthase related protein, C-terminal domain RPE_RS16475 PF00551 Formyl transferase RPE_RS16480 PF00313 'Cold-shock' DNA-binding domain RPE_RS16485 PF00334 Nucleoside diphosphate kinase RPE_RS16495 PF00005 ABC transporter RPE_RS16495 PF12848 ABC transporter RPE_RS16505 PF04364 DNA polymerase III chi subunit, HolC RPE_RS16510 PF00883 Cytosol aminopeptidase family, catalytic domain RPE_RS16510 PF02789 Cytosol aminopeptidase family, N-terminal domain RPE_RS16515 PF03739 RPE_RS16515 RPE_RS16520 PF03739 RPE_RS16520 RPE_RS16525 PF04453 Organic solvent tolerance protein RPE_RS16530 PF09312 SurA N-terminal domain RPE_RS16535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RPE_RS16540 PF00398 Ribosomal RNA adenine dimethylase RPE_RS16545 PF00107 Zinc-binding dehydrogenase RPE_RS16545 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS16555 PF14415 Domain of unknown function (DUF4424) RPE_RS16560 PF00625 Guanylate kinase RPE_RS16565 PF03755 RPE_RS16565 RPE_RS16565 PF08340 RPE_RS16565 RPE_RS16570 PF02618 YceG-like family RPE_RS16575 PF00109 Beta-ketoacyl synthase, N-terminal domain RPE_RS16575 PF02801 Beta-ketoacyl synthase, C-terminal domain RPE_RS16580 PF00550 Phosphopantetheine attachment site RPE_RS16585 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS16590 PF00698 Acyl transferase domain RPE_RS16595 PF00990 GGDEF domain RPE_RS16600 PF01250 Ribosomal protein S6 RPE_RS16605 PF01084 Ribosomal protein S18 RPE_RS16610 PF10137 RPE_RS16610 RPE_RS16625 PF09991 RPE_RS16625 RPE_RS16630 PF01281 Ribosomal protein L9, N-terminal domain RPE_RS16630 PF03948 Ribosomal protein L9, C-terminal domain RPE_RS16645 PF00772 DnaB-like helicase N terminal domain RPE_RS16645 PF03796 DnaB-like helicase C terminal domain RPE_RS16650 PF13476 AAA domain RPE_RS16655 PF02687 RPE_RS16655 RPE_RS16655 PF12704 MacB-like periplasmic core domain RPE_RS16660 PF00005 ABC transporter RPE_RS16665 PF00529 HlyD family secretion protein RPE_RS16665 PF16576 RPE_RS16665 RPE_RS16670 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS16670 PF00672 HAMP domain RPE_RS16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS16675 PF00072 Response regulator receiver domain RPE_RS16675 PF00486 Transcriptional regulatory protein, C terminal RPE_RS16685 PF16576 RPE_RS16685 RPE_RS16690 PF00873 AcrB/AcrD/AcrF family RPE_RS16700 PF13231 RPE_RS16700 RPE_RS16705 PF00583 Acetyltransferase (GNAT) family RPE_RS16710 PF00990 GGDEF domain RPE_RS16710 PF12860 RPE_RS16710 RPE_RS16715 PF00842 Alanine racemase, C-terminal domain RPE_RS16715 PF01168 Alanine racemase, N-terminal domain RPE_RS16720 PF00583 Acetyltransferase (GNAT) family RPE_RS16735 PF13481 AAA domain RPE_RS16735 PF13541 Subunit ChlI of Mg-chelatase RPE_RS16740 PF02674 RPE_RS16740 RPE_RS16745 PF00156 Phosphoribosyl transferase domain RPE_RS16745 PF13537 Glutamine amidotransferase domain RPE_RS16750 PF00106 short chain dehydrogenase RPE_RS16755 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) RPE_RS16765 PF07690 Major Facilitator Superfamily RPE_RS16770 PF01926 50S ribosome-binding GTPase RPE_RS16770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RPE_RS16780 PF09976 Tetratricopeptide repeat RPE_RS16785 PF02548 Ketopantoate hydroxymethyltransferase RPE_RS16790 PF07298 RPE_RS16790 RPE_RS16795 PF03401 Tripartite tricarboxylate transporter family receptor RPE_RS16800 PF17200 RPE_RS16800 RPE_RS16815 PF02637 GatB domain RPE_RS16815 PF02934 GatB/GatE catalytic domain RPE_RS16820 PF01734 Patatin-like phospholipase RPE_RS16825 PF01425 Amidase RPE_RS16830 PF04365 Protein of unknown function (DUF497) RPE_RS16835 PF14384 RPE_RS16835 RPE_RS16845 PF02686 Glu-tRNAGln amidotransferase C subunit RPE_RS16850 PF03060 Nitronate monooxygenase RPE_RS16860 PF04199 Putative cyclase RPE_RS16865 PF00440 Bacterial regulatory proteins, tetR family RPE_RS16865 PF13977 Bacterial transcriptional repressor RPE_RS16870 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family RPE_RS16875 PF03652 Uncharacterised protein family (UPF0081) RPE_RS16880 PF03547 RPE_RS16880 RPE_RS16885 PF00027 Cyclic nucleotide-binding domain RPE_RS16885 PF13545 Crp-like helix-turn-helix domain RPE_RS16890 PF00027 Cyclic nucleotide-binding domain RPE_RS16890 PF13545 Crp-like helix-turn-helix domain RPE_RS16895 PF01427 D-ala-D-ala dipeptidase RPE_RS16900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPE_RS16900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPE_RS16905 PF01979 Amidohydrolase family RPE_RS16910 PF02660 RPE_RS16910 RPE_RS16920 PF02481 DNA recombination-mediator protein A RPE_RS16930 PF01131 DNA topoisomerase RPE_RS16930 PF01396 RPE_RS16930 RPE_RS16930 PF01751 Toprim domain RPE_RS16930 PF13368 RPE_RS16930 RPE_RS16935 PF00575 S1 RNA binding domain RPE_RS16935 PF00773 RNB domain RPE_RS16940 PF06170 RPE_RS16940 RPE_RS16950 PF00471 Ribosomal protein L33 RPE_RS16955 PF05050 Methyltransferase FkbM domain RPE_RS16960 PF00072 Response regulator receiver domain RPE_RS16960 PF00990 GGDEF domain RPE_RS16965 PF00072 Response regulator receiver domain RPE_RS16970 PF12096 RPE_RS16970 RPE_RS16975 PF00817 impB/mucB/samB family RPE_RS16975 PF11799 impB/mucB/samB family C-terminal domain RPE_RS16990 PF08904 RPE_RS16990 RPE_RS16995 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease RPE_RS17000 PF03009 Glycerophosphoryl diester phosphodiesterase family RPE_RS17005 PF04339 RPE_RS17005 RPE_RS17010 PF01230 HIT domain RPE_RS17015 PF01980 Uncharacterised protein family UPF0066 RPE_RS17020 PF05437 RPE_RS17020 RPE_RS17025 PF03591 RPE_RS17025 RPE_RS17030 PF07238 PilZ domain RPE_RS17035 PF01464 Transglycosylase SLT domain RPE_RS17035 PF05036 Sporulation related domain RPE_RS17040 PF00155 Aminotransferase class I and II RPE_RS17045 PF13500 AAA domain RPE_RS17050 PF00202 Aminotransferase class-III RPE_RS17055 PF13231 RPE_RS17055 RPE_RS17060 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS17060 PF02861 Clp amino terminal domain RPE_RS17060 PF07724 AAA domain (Cdc48 subfamily) RPE_RS17060 PF10431 C-terminal, D2-small domain, of ClpB protein RPE_RS17065 PF02617 ATP-dependent Clp protease adaptor protein ClpS RPE_RS17070 PF13400 RPE_RS17070 RPE_RS17075 PF00768 D-alanyl-D-alanine carboxypeptidase RPE_RS17075 PF05036 Sporulation related domain RPE_RS17080 PF00226 DnaJ domain RPE_RS17090 PF02661 Fic/DOC family RPE_RS17095 PF01381 Helix-turn-helix RPE_RS17100 PF09140 ATPase MipZ RPE_RS17105 PF02569 Pantoate-beta-alanine ligase RPE_RS17110 PF07370 RPE_RS17110 RPE_RS17125 PF13410 Glutathione S-transferase, C-terminal domain RPE_RS17125 PF13417 Glutathione S-transferase, N-terminal domain RPE_RS17130 PF11625 Protein of unknown function (DUF3253) RPE_RS17135 PF02698 DUF218 domain RPE_RS17140 PF00248 Aldo/keto reductase family RPE_RS17145 PF13560 Helix-turn-helix domain RPE_RS17150 PF00571 CBS domain RPE_RS17150 PF01769 Divalent cation transporter RPE_RS17150 PF03448 MgtE intracellular N domain RPE_RS17155 PF01522 Polysaccharide deacetylase RPE_RS17160 PF01522 Polysaccharide deacetylase RPE_RS17175 PF08218 Citrate lyase ligase C-terminal domain RPE_RS17180 PF06857 RPE_RS17180 RPE_RS17185 PF03328 HpcH/HpaI aldolase/citrate lyase family RPE_RS17190 PF04223 Citrate lyase, alpha subunit (CitF) RPE_RS17195 PF03802 RPE_RS17195 RPE_RS17200 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RPE_RS17205 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RPE_RS17210 PF01850 PIN domain RPE_RS17220 PF01052 Surface presentation of antigens (SPOA) RPE_RS17225 PF03099 Biotin/lipoate A/B protein ligase family RPE_RS17230 PF00708 Acylphosphatase RPE_RS17235 PF13714 Phosphoenolpyruvate phosphomutase RPE_RS17240 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RPE_RS17240 PF00364 Biotin-requiring enzyme RPE_RS17240 PF02785 Biotin carboxylase C-terminal domain RPE_RS17240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPE_RS17250 PF09945 RPE_RS17250 RPE_RS17255 PF00875 DNA photolyase RPE_RS17255 PF03441 FAD binding domain of DNA photolyase RPE_RS17265 PF00892 EamA-like transporter family RPE_RS17270 PF00990 GGDEF domain RPE_RS17285 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS17290 PF00072 Response regulator receiver domain RPE_RS17290 PF00486 Transcriptional regulatory protein, C terminal RPE_RS17295 PF13439 Glycosyltransferase Family 4 RPE_RS17295 PF13692 Glycosyl transferases group 1 RPE_RS17300 PF00149 Calcineurin-like phosphoesterase RPE_RS17305 PF09335 RPE_RS17305 RPE_RS17310 PF13649 Methyltransferase domain RPE_RS17315 PF00072 Response regulator receiver domain RPE_RS17325 PF01464 Transglycosylase SLT domain RPE_RS17335 PF10722 Putative bacterial sensory transduction regulator RPE_RS17340 PF13145 PPIC-type PPIASE domain RPE_RS17350 PF16930 RPE_RS17350 RPE_RS17365 PF02472 Biopolymer transport protein ExbD/TolR RPE_RS17370 PF01618 RPE_RS17370 RPE_RS17370 PF10102 RPE_RS17370 RPE_RS17370 PF13385 Concanavalin A-like lectin/glucanases superfamily RPE_RS17375 PF08479 POTRA domain, ShlB-type RPE_RS17380 PF04773 FecR protein RPE_RS17380 PF16220 RPE_RS17380 RPE_RS17380 PF16344 RPE_RS17380 RPE_RS17395 PF07660 Secretin and TonB N terminus short domain RPE_RS17405 PF13365 Trypsin-like peptidase domain RPE_RS17410 PF05860 haemagglutination activity domain RPE_RS17410 PF12545 RPE_RS17410 RPE_RS17415 PF04773 FecR protein RPE_RS17415 PF16220 RPE_RS17415 RPE_RS17415 PF16344 RPE_RS17415 RPE_RS17420 PF04542 Sigma-70 region 2 RPE_RS17420 PF08281 Sigma-70, region 4 RPE_RS17425 PF13103 TonB C terminal RPE_RS17430 PF00873 AcrB/AcrD/AcrF family RPE_RS17435 PF16576 RPE_RS17435 RPE_RS17440 PF00440 Bacterial regulatory proteins, tetR family RPE_RS17440 PF14246 AefR-like transcriptional repressor, C-terminal region RPE_RS17450 PF00593 TonB dependent receptor RPE_RS17450 PF07715 TonB-dependent Receptor Plug Domain RPE_RS17455 PF01980 Uncharacterised protein family UPF0066 RPE_RS17460 PF01497 Periplasmic binding protein RPE_RS17465 PF01032 FecCD transport family RPE_RS17470 PF00005 ABC transporter RPE_RS17475 PF10649 RPE_RS17475 RPE_RS17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS17480 PF03459 TOBE domain RPE_RS17485 PF13229 Right handed beta helix region RPE_RS17490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPE_RS17490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPE_RS17490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPE_RS17490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPE_RS17495 PF13480 Acetyltransferase (GNAT) domain RPE_RS17500 PF03808 RPE_RS17500 RPE_RS17505 PF16363 RPE_RS17505 RPE_RS17510 PF02563 Polysaccharide biosynthesis/export protein RPE_RS17510 PF10531 SLBB domain RPE_RS17515 PF00483 Nucleotidyl transferase RPE_RS17515 PF01050 Mannose-6-phosphate isomerase RPE_RS17520 PF02706 Chain length determinant protein RPE_RS17535 PF04932 RPE_RS17535 RPE_RS17540 PF01757 RPE_RS17540 RPE_RS17545 PF01370 NAD dependent epimerase/dehydratase family RPE_RS17550 PF02397 RPE_RS17550 RPE_RS17555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPE_RS17555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPE_RS17555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPE_RS17560 PF00583 Acetyltransferase (GNAT) family RPE_RS17565 PF00583 Acetyltransferase (GNAT) family RPE_RS17570 PF01370 NAD dependent epimerase/dehydratase family RPE_RS17575 PF13439 Glycosyltransferase Family 4 RPE_RS17575 PF13692 Glycosyl transferases group 1 RPE_RS17580 PF00535 Glycosyl transferase family 2 RPE_RS17585 PF00005 ABC transporter RPE_RS17585 PF00664 ABC transporter transmembrane region RPE_RS17590 PF13437 HlyD family secretion protein RPE_RS17590 PF13533 Biotin-lipoyl like RPE_RS17600 PF00196 Bacterial regulatory proteins, luxR family RPE_RS17615 PF03050 RPE_RS17615 RPE_RS17615 PF13005 RPE_RS17615 RPE_RS17615 PF13007 RPE_RS17615 RPE_RS17615 PF13817 RPE_RS17615 RPE_RS17620 PF05717 RPE_RS17620 RPE_RS17625 PF01527 Transposase RPE_RS17635 PF16518 RPE_RS17635 RPE_RS17640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS17640 PF00672 HAMP domain RPE_RS17640 PF12729 RPE_RS17640 RPE_RS17645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS17645 PF00672 HAMP domain RPE_RS17645 PF17200 RPE_RS17645 RPE_RS17650 PF12833 Helix-turn-helix domain RPE_RS17650 PF14525 RPE_RS17650 RPE_RS17655 PF00672 HAMP domain RPE_RS17655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS17655 PF08448 PAS fold RPE_RS17655 PF13426 PAS domain RPE_RS17660 PF01011 PQQ enzyme repeat RPE_RS17660 PF13360 PQQ-like domain RPE_RS17660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPE_RS17670 PF00701 Dihydrodipicolinate synthetase family RPE_RS17675 PF01575 MaoC like domain RPE_RS17675 PF13452 N-terminal half of MaoC dehydratase RPE_RS17680 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RPE_RS17680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS17695 PF06966 RPE_RS17695 RPE_RS17710 PF01223 DNA/RNA non-specific endonuclease RPE_RS17710 PF13365 Trypsin-like peptidase domain RPE_RS17715 PF03009 Glycerophosphoryl diester phosphodiesterase family RPE_RS17720 PF09000 Cytotoxic RPE_RS17740 PF01039 Carboxyl transferase domain RPE_RS17745 PF00905 Penicillin binding protein transpeptidase domain RPE_RS17750 PF01312 FlhB HrpN YscU SpaS Family RPE_RS17755 PF02120 Flagellar hook-length control protein FliK RPE_RS17760 PF07542 ATP12 chaperone protein RPE_RS17770 PF00849 RNA pseudouridylate synthase RPE_RS17770 PF01479 S4 domain RPE_RS17780 PF00881 Nitroreductase family RPE_RS17785 PF00881 Nitroreductase family RPE_RS17790 PF04940 Sensors of blue-light using FAD RPE_RS17795 PF13649 Methyltransferase domain RPE_RS17800 PF01894 Uncharacterised protein family UPF0047 RPE_RS17805 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RPE_RS17810 PF13458 Periplasmic binding protein RPE_RS17815 PF05496 Holliday junction DNA helicase ruvB N-terminus RPE_RS17815 PF12002 MgsA AAA+ ATPase C terminal RPE_RS17815 PF16193 RPE_RS17815 RPE_RS17820 PF13180 PDZ domain RPE_RS17820 PF13365 Trypsin-like peptidase domain RPE_RS17825 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS17825 PF13602 Zinc-binding dehydrogenase RPE_RS17830 PF04828 Glutathione-dependent formaldehyde-activating enzyme RPE_RS17835 PF00106 short chain dehydrogenase RPE_RS17840 PF01196 Ribosomal protein L17 RPE_RS17845 PF01000 RNA polymerase Rpb3/RpoA insert domain RPE_RS17845 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RPE_RS17845 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RPE_RS17850 PF00411 Ribosomal protein S11 RPE_RS17855 PF00416 Ribosomal protein S13/S18 RPE_RS17860 PF00406 Adenylate kinase RPE_RS17865 PF00344 SecY translocase RPE_RS17870 PF00828 Ribosomal protein L18e/L15 RPE_RS17875 PF00327 Ribosomal protein L30p/L7e RPE_RS17880 PF00333 Ribosomal protein S5, N-terminal domain RPE_RS17880 PF03719 Ribosomal protein S5, C-terminal domain RPE_RS17885 PF00861 Ribosomal L18p/L5e family RPE_RS17890 PF00347 Ribosomal protein L6 RPE_RS17895 PF00410 Ribosomal protein S8 RPE_RS17900 PF00253 Ribosomal protein S14p/S29e RPE_RS17905 PF00281 Ribosomal protein L5 RPE_RS17905 PF00673 ribosomal L5P family C-terminus RPE_RS17910 PF00467 KOW motif RPE_RS17910 PF17136 RPE_RS17910 RPE_RS17915 PF00238 Ribosomal protein L14p/L23e RPE_RS17920 PF00366 Ribosomal protein S17 RPE_RS17925 PF00831 Ribosomal L29 protein RPE_RS17930 PF00252 Ribosomal protein L16p/L10e RPE_RS17935 PF00189 Ribosomal protein S3, C-terminal domain RPE_RS17935 PF07650 KH domain RPE_RS17940 PF00237 Ribosomal protein L22p/L17e RPE_RS17945 PF00203 Ribosomal protein S19 RPE_RS17950 PF00181 Ribosomal Proteins L2, RNA binding domain RPE_RS17950 PF03947 Ribosomal Proteins L2, C-terminal domain RPE_RS17955 PF00276 Ribosomal protein L23 RPE_RS17960 PF00573 Ribosomal protein L4/L1 family RPE_RS17965 PF00297 Ribosomal protein L3 RPE_RS17970 PF00338 Ribosomal protein S10p/S20e RPE_RS17975 PF00009 Elongation factor Tu GTP binding domain RPE_RS17975 PF03143 Elongation factor Tu C-terminal domain RPE_RS17975 PF03144 Elongation factor Tu domain 2 RPE_RS17980 PF00009 Elongation factor Tu GTP binding domain RPE_RS17980 PF00679 Elongation factor G C-terminus RPE_RS17980 PF03144 Elongation factor Tu domain 2 RPE_RS17980 PF03764 Elongation factor G, domain IV RPE_RS17980 PF14492 Elongation Factor G, domain II RPE_RS17985 PF00177 Ribosomal protein S7p/S5e RPE_RS17990 PF00164 Ribosomal protein S12/S23 RPE_RS17995 PF13480 Acetyltransferase (GNAT) domain RPE_RS18000 PF01494 FAD binding domain RPE_RS18005 PF00005 ABC transporter RPE_RS18005 PF00664 ABC transporter transmembrane region RPE_RS18010 PF01593 Flavin containing amine oxidoreductase RPE_RS18010 PF08241 Methyltransferase domain RPE_RS18015 PF00623 RNA polymerase Rpb1, domain 2 RPE_RS18015 PF04983 RNA polymerase Rpb1, domain 3 RPE_RS18015 PF04997 RNA polymerase Rpb1, domain 1 RPE_RS18015 PF04998 RNA polymerase Rpb1, domain 5 RPE_RS18015 PF05000 RNA polymerase Rpb1, domain 4 RPE_RS18020 PF00562 RNA polymerase Rpb2, domain 6 RPE_RS18020 PF04560 RNA polymerase Rpb2, domain 7 RPE_RS18020 PF04561 RNA polymerase Rpb2, domain 2 RPE_RS18020 PF04563 RNA polymerase beta subunit RPE_RS18020 PF04565 RNA polymerase Rpb2, domain 3 RPE_RS18020 PF10385 RNA polymerase beta subunit external 1 domain RPE_RS18025 PF00542 Ribosomal protein L7/L12 C-terminal domain RPE_RS18025 PF16320 RPE_RS18025 RPE_RS18030 PF00466 Ribosomal protein L10 RPE_RS18045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPE_RS18050 PF00111 2Fe-2S iron-sulfur cluster binding domain RPE_RS18050 PF01799 [2Fe-2S] binding domain RPE_RS18055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPE_RS18055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPE_RS18060 PF00687 Ribosomal protein L1p/L10e family RPE_RS18065 PF00298 Ribosomal protein L11, RNA binding domain RPE_RS18065 PF03946 Ribosomal protein L11, N-terminal domain RPE_RS18070 PF00467 KOW motif RPE_RS18070 PF02357 Transcription termination factor nusG RPE_RS18075 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RPE_RS18080 PF00565 Staphylococcal nuclease homologue RPE_RS18080 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel RPE_RS18090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS18090 PF00672 HAMP domain RPE_RS18090 PF14827 Sensory domain of two-component sensor kinase RPE_RS18095 PF00009 Elongation factor Tu GTP binding domain RPE_RS18095 PF03143 Elongation factor Tu C-terminal domain RPE_RS18095 PF03144 Elongation factor Tu domain 2 RPE_RS18100 PF00144 Beta-lactamase RPE_RS18105 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS18110 PF00300 Histidine phosphatase superfamily (branch 1) RPE_RS18115 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS18120 PF01636 Phosphotransferase enzyme family RPE_RS18125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS18125 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS18125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS18130 PF00440 Bacterial regulatory proteins, tetR family RPE_RS18140 PF09860 RPE_RS18140 RPE_RS18145 PF12697 Alpha/beta hydrolase family RPE_RS18150 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS18165 PF00072 Response regulator receiver domain RPE_RS18165 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS18165 PF00989 PAS fold RPE_RS18165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS18165 PF08447 PAS fold RPE_RS18165 PF13426 PAS domain RPE_RS18170 PF13690 Chemotaxis phosphatase CheX RPE_RS18175 PF00072 Response regulator receiver domain RPE_RS18180 PF01584 CheW-like domain RPE_RS18180 PF01627 Hpt domain RPE_RS18180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS18180 PF02895 Signal transducing histidine kinase, homodimeric domain RPE_RS18185 PF00072 Response regulator receiver domain RPE_RS18190 PF01739 CheR methyltransferase, SAM binding domain RPE_RS18190 PF03705 CheR methyltransferase, all-alpha domain RPE_RS18195 PF13646 HEAT repeats RPE_RS18200 PF00072 Response regulator receiver domain RPE_RS18200 PF01339 CheB methylesterase RPE_RS18205 PF01584 CheW-like domain RPE_RS18210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS18220 PF03631 RPE_RS18220 RPE_RS18225 PF04226 RPE_RS18225 RPE_RS18230 PF00561 alpha/beta hydrolase fold RPE_RS18235 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS18240 PF02446 4-alpha-glucanotransferase RPE_RS18245 PF05067 Manganese containing catalase RPE_RS18245 PF05974 Domain of unknown function (DUF892) RPE_RS18255 PF03372 Endonuclease/Exonuclease/phosphatase family RPE_RS18260 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS18265 PF00107 Zinc-binding dehydrogenase RPE_RS18265 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS18265 PF13823 Alcohol dehydrogenase GroES-associated RPE_RS18270 PF00384 Molybdopterin oxidoreductase RPE_RS18270 PF01568 Molydopterin dinucleotide binding domain RPE_RS18280 PF06165 Glycosyltransferase family 36 RPE_RS18280 PF10091 Putative glucoamylase RPE_RS18280 PF17167 RPE_RS18280 RPE_RS18285 PF07536 RPE_RS18285 RPE_RS18290 PF00027 Cyclic nucleotide-binding domain RPE_RS18290 PF13545 Crp-like helix-turn-helix domain RPE_RS18300 PF01758 Sodium Bile acid symporter family RPE_RS18305 PF03960 ArsC family RPE_RS18310 PF01451 Low molecular weight phosphotyrosine protein phosphatase RPE_RS18315 PF12840 Helix-turn-helix domain RPE_RS18320 PF13192 Thioredoxin domain RPE_RS18325 PF03773 RPE_RS18325 RPE_RS18330 PF01022 Bacterial regulatory protein, arsR family RPE_RS18340 PF05974 Domain of unknown function (DUF892) RPE_RS18345 PF13628 RPE_RS18345 RPE_RS18350 PF01841 Transglutaminase-like superfamily RPE_RS18360 PF09945 RPE_RS18360 RPE_RS18365 PF04966 Carbohydrate-selective porin, OprB family RPE_RS18370 PF12801 RPE_RS18370 RPE_RS18375 PF03239 RPE_RS18375 RPE_RS18380 PF13473 Cupredoxin-like domain RPE_RS18385 PF10634 Fe2+ transport protein RPE_RS18390 PF00106 short chain dehydrogenase RPE_RS18395 PF00440 Bacterial regulatory proteins, tetR family RPE_RS18400 PF12697 Alpha/beta hydrolase family RPE_RS18405 PF07883 Cupin domain RPE_RS18410 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RPE_RS18415 PF02421 Ferrous iron transport protein B RPE_RS18415 PF07664 RPE_RS18415 RPE_RS18415 PF07670 Nucleoside recognition RPE_RS18420 PF04023 FeoA domain RPE_RS18435 PF00588 SpoU rRNA Methylase family RPE_RS18435 PF08032 RNA 2'-O ribose methyltransferase substrate binding RPE_RS18440 PF01370 NAD dependent epimerase/dehydratase family RPE_RS18445 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS18450 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS18460 PF00005 ABC transporter RPE_RS18460 PF08402 TOBE domain RPE_RS18465 PF00920 Dehydratase family RPE_RS18470 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS18475 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS18485 PF00171 Aldehyde dehydrogenase family RPE_RS18485 PF00465 Iron-containing alcohol dehydrogenase RPE_RS18495 PF09361 RPE_RS18495 RPE_RS18500 PF00563 EAL domain RPE_RS18500 PF00672 HAMP domain RPE_RS18500 PF00990 GGDEF domain RPE_RS18505 PF13358 DDE superfamily endonuclease RPE_RS18510 PF13565 RPE_RS18510 RPE_RS18525 PF01541 GIY-YIG catalytic domain RPE_RS18530 PF11730 RPE_RS18530 RPE_RS18535 PF00255 Glutathione peroxidase RPE_RS18540 PF01425 Amidase RPE_RS18550 PF00561 alpha/beta hydrolase fold RPE_RS18555 PF02635 DsrE/DsrF-like family RPE_RS18560 PF00342 Phosphoglucose isomerase RPE_RS18560 PF00923 Transaldolase RPE_RS18565 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RPE_RS18565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPE_RS18570 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RPE_RS18570 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RPE_RS18575 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RPE_RS18580 PF01202 Shikimate kinase RPE_RS18585 PF08282 haloacid dehalogenase-like hydrolase RPE_RS18590 PF00723 Glycosyl hydrolases family 15 RPE_RS18595 PF02446 4-alpha-glucanotransferase RPE_RS18600 PF00128 Alpha amylase, catalytic domain RPE_RS18600 PF11896 Domain of unknown function (DUF3416) RPE_RS18605 PF00128 Alpha amylase, catalytic domain RPE_RS18605 PF16657 RPE_RS18605 RPE_RS18610 PF00128 Alpha amylase, catalytic domain RPE_RS18610 PF02806 Alpha amylase, C-terminal all-beta domain RPE_RS18610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RPE_RS18615 PF00128 Alpha amylase, catalytic domain RPE_RS18615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RPE_RS18620 PF05161 MOFRL family RPE_RS18620 PF13660 Domain of unknown function (DUF4147) RPE_RS18625 PF00128 Alpha amylase, catalytic domain RPE_RS18630 PF09650 RPE_RS18630 RPE_RS18635 PF01068 ATP dependent DNA ligase domain RPE_RS18635 PF04679 ATP dependent DNA ligase C terminal region RPE_RS18635 PF13298 DNA polymerase Ligase (LigD) RPE_RS18640 PF02735 Ku70/Ku80 beta-barrel domain RPE_RS18650 PF01206 Sulfurtransferase TusA RPE_RS18655 PF12804 MobA-like NTP transferase domain RPE_RS18660 PF01730 UreF RPE_RS18665 PF02814 UreE urease accessory protein, N-terminal domain RPE_RS18665 PF05194 UreE urease accessory protein, C-terminal domain RPE_RS18670 PF03992 Antibiotic biosynthesis monooxygenase RPE_RS18675 PF00449 Urease alpha-subunit, N-terminal domain RPE_RS18675 PF01979 Amidohydrolase family RPE_RS18680 PF13328 HD domain RPE_RS18685 PF00699 Urease beta subunit RPE_RS18690 PF00547 Urease, gamma subunit RPE_RS18695 PF01774 UreD urease accessory protein RPE_RS18700 PF00005 ABC transporter RPE_RS18705 PF00005 ABC transporter RPE_RS18705 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS18710 PF02653 RPE_RS18710 RPE_RS18715 PF02653 RPE_RS18715 RPE_RS18720 PF13433 Periplasmic binding protein domain RPE_RS18725 PF00270 DEAD/DEAH box helicase RPE_RS18725 PF00271 Helicase conserved C-terminal domain RPE_RS18730 PF01176 Translation initiation factor 1A / IF-1 RPE_RS18735 PF00313 'Cold-shock' DNA-binding domain RPE_RS18740 PF07811 RPE_RS18740 RPE_RS18745 PF07811 RPE_RS18745 RPE_RS18750 PF01478 Type IV leader peptidase family RPE_RS18760 PF00263 RPE_RS18760 RPE_RS18760 PF04972 BON domain RPE_RS18760 PF13629 RPE_RS18760 RPE_RS18765 PF09476 RPE_RS18765 RPE_RS18770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS18775 PF00437 Type II/IV secretion system protein RPE_RS18780 PF00482 Type II secretion system (T2SS), protein F RPE_RS18785 PF00482 Type II secretion system (T2SS), protein F RPE_RS18790 PF13424 Tetratricopeptide repeat RPE_RS18790 PF14559 Tetratricopeptide repeat RPE_RS18795 PF00883 Cytosol aminopeptidase family, catalytic domain RPE_RS18800 PF00877 NlpC/P60 family RPE_RS18805 PF00293 NUDIX domain RPE_RS18810 PF00005 ABC transporter RPE_RS18810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPE_RS18815 PF01850 PIN domain RPE_RS18825 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS18825 PF12911 RPE_RS18825 RPE_RS18830 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS18835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPE_RS18840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPE_RS18845 PF00034 Cytochrome c RPE_RS18850 PF02348 Cytidylyltransferase RPE_RS18855 PF00800 Prephenate dehydratase RPE_RS18860 PF00296 Luciferase-like monooxygenase RPE_RS18865 PF02219 Methylenetetrahydrofolate reductase RPE_RS18870 PF00809 Pterin binding enzyme RPE_RS18870 PF02310 B12 binding domain RPE_RS18870 PF02574 Homocysteine S-methyltransferase RPE_RS18870 PF02607 B12 binding domain RPE_RS18870 PF02965 Vitamin B12 dependent methionine synthase, activation domain RPE_RS18875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RPE_RS18875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RPE_RS18880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS18880 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS18880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS18885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS18885 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS18885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS18890 PF01548 RPE_RS18890 RPE_RS18890 PF02371 RPE_RS18890 RPE_RS18895 PF00108 Thiolase, N-terminal domain RPE_RS18895 PF02803 Thiolase, C-terminal domain RPE_RS18900 PF00501 AMP-binding enzyme RPE_RS18900 PF13193 AMP-binding enzyme C-terminal domain RPE_RS18905 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS18905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPE_RS18905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPE_RS18910 PF01614 Bacterial transcriptional regulator RPE_RS18910 PF09339 IclR helix-turn-helix domain RPE_RS18915 PF00005 ABC transporter RPE_RS18915 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS18920 PF00005 ABC transporter RPE_RS18925 PF02653 RPE_RS18925 RPE_RS18930 PF02653 RPE_RS18930 RPE_RS18935 PF13458 Periplasmic binding protein RPE_RS18940 PF13458 Periplasmic binding protein RPE_RS18945 PF13458 Periplasmic binding protein RPE_RS18950 PF13458 Periplasmic binding protein RPE_RS18955 PF11322 RPE_RS18955 RPE_RS18960 PF00999 Sodium/hydrogen exchanger family RPE_RS18960 PF02254 TrkA-N domain RPE_RS18965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS18965 PF00672 HAMP domain RPE_RS18970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS18975 PF01047 MarR family RPE_RS18980 PF02653 RPE_RS18980 RPE_RS18985 PF00005 ABC transporter RPE_RS18985 PF02653 RPE_RS18985 RPE_RS18985 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS18990 PF00005 ABC transporter RPE_RS19000 PF00990 GGDEF domain RPE_RS19005 PF13458 Periplasmic binding protein RPE_RS19010 PF13279 Thioesterase-like superfamily RPE_RS19015 PF00501 AMP-binding enzyme RPE_RS19020 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS19025 PF11578 Protein of unknown function (DUF3237) RPE_RS19030 PF06808 RPE_RS19030 RPE_RS19035 PF04290 RPE_RS19035 RPE_RS19040 PF03480 Bacterial extracellular solute-binding protein, family 7 RPE_RS19045 PF01494 FAD binding domain RPE_RS19050 PF01548 RPE_RS19050 RPE_RS19050 PF02371 RPE_RS19050 RPE_RS19055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS19055 PF03466 LysR substrate binding domain RPE_RS19060 PF01243 Pyridoxamine 5'-phosphate oxidase RPE_RS19065 PF03692 RPE_RS19065 RPE_RS19080 PF03600 Citrate transporter RPE_RS19085 PF11750 RPE_RS19085 RPE_RS19095 PF00027 Cyclic nucleotide-binding domain RPE_RS19100 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS19105 PF00881 Nitroreductase family RPE_RS19110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS19110 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS19110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS19115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS19115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS19120 PF00501 AMP-binding enzyme RPE_RS19125 PF00106 short chain dehydrogenase RPE_RS19130 PF00440 Bacterial regulatory proteins, tetR family RPE_RS19130 PF14514 Transcriptional regulator, TetR, C-terminal RPE_RS19135 PF00108 Thiolase, N-terminal domain RPE_RS19135 PF02803 Thiolase, C-terminal domain RPE_RS19140 PF00501 AMP-binding enzyme RPE_RS19140 PF13193 AMP-binding enzyme C-terminal domain RPE_RS19145 PF00239 Resolvase, N terminal domain RPE_RS19150 PF03797 Autotransporter beta-domain RPE_RS19155 PF00583 Acetyltransferase (GNAT) family RPE_RS19160 PF06568 RPE_RS19160 RPE_RS19165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS19165 PF03466 LysR substrate binding domain RPE_RS19170 PF02464 Competence-damaged protein RPE_RS19185 PF00440 Bacterial regulatory proteins, tetR family RPE_RS19200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RPE_RS19200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RPE_RS19205 PF07690 Major Facilitator Superfamily RPE_RS19210 PF13527 Acetyltransferase (GNAT) domain RPE_RS19215 PF01554 MatE RPE_RS19220 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) RPE_RS19225 PF02277 Phosphoribosyltransferase RPE_RS19230 PF00216 Bacterial DNA-binding protein RPE_RS19235 PF00300 Histidine phosphatase superfamily (branch 1) RPE_RS19240 PF02654 RPE_RS19240 RPE_RS19245 PF01935 Domain of unknown function DUF87 RPE_RS19250 PF00005 ABC transporter RPE_RS19255 PF00005 ABC transporter RPE_RS19255 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS19260 PF02653 RPE_RS19260 RPE_RS19265 PF02653 RPE_RS19265 RPE_RS19270 PF13458 Periplasmic binding protein RPE_RS19275 PF01230 HIT domain RPE_RS19280 PF00593 TonB dependent receptor RPE_RS19280 PF07715 TonB-dependent Receptor Plug Domain RPE_RS19285 PF00005 ABC transporter RPE_RS19290 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS19295 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein RPE_RS19300 PF02256 Iron hydrogenase small subunit RPE_RS19300 PF02906 Iron only hydrogenase large subunit, C-terminal domain RPE_RS19300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPE_RS19300 PF13187 4Fe-4S dicluster domain RPE_RS19300 PF13510 2Fe-2S iron-sulfur cluster binding domain RPE_RS19305 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS19305 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPE_RS19305 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RPE_RS19310 PF00871 Acetokinase family RPE_RS19315 PF01515 Phosphate acetyl/butaryl transferase RPE_RS19315 PF07085 DRTGG domain RPE_RS19315 PF13500 AAA domain RPE_RS19320 PF09678 RPE_RS19320 RPE_RS19325 PF03653 RPE_RS19325 RPE_RS19330 PF09990 RPE_RS19330 RPE_RS19335 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPE_RS19340 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPE_RS19350 PF03334 RPE_RS19350 RPE_RS19355 PF04066 RPE_RS19355 RPE_RS19360 PF01899 RPE_RS19360 RPE_RS19365 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS19370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RPE_RS19375 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RPE_RS19375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RPE_RS19375 PF04039 RPE_RS19375 RPE_RS19375 PF13244 RPE_RS19375 RPE_RS19390 PF00122 E1-E2 ATPase RPE_RS19390 PF00702 haloacid dehalogenase-like hydrolase RPE_RS19395 PF00158 Sigma-54 interaction domain RPE_RS19395 PF02954 Bacterial regulatory protein, Fis family RPE_RS19400 PF13772 AIG2-like family RPE_RS19405 PF09582 RPE_RS19405 RPE_RS19410 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS19415 PF03139 RPE_RS19415 RPE_RS19420 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS19425 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RPE_RS19430 PF00158 Sigma-54 interaction domain RPE_RS19430 PF01590 GAF domain RPE_RS19430 PF02954 Bacterial regulatory protein, Fis family RPE_RS19435 PF12900 Pyridoxamine 5'-phosphate oxidase RPE_RS19440 PF00155 Aminotransferase class I and II RPE_RS19440 PF00392 Bacterial regulatory proteins, gntR family RPE_RS19445 PF07357 RPE_RS19445 RPE_RS19450 PF13379 NMT1-like family RPE_RS19455 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS19460 PF00005 ABC transporter RPE_RS19465 PF00696 Amino acid kinase family RPE_RS19470 PF00696 Amino acid kinase family RPE_RS19475 PF01292 Prokaryotic cytochrome b561 RPE_RS19480 PF13670 RPE_RS19480 RPE_RS19485 PF03413 Peptidase propeptide and YPEB domain RPE_RS19490 PF01988 RPE_RS19490 RPE_RS19495 PF01794 RPE_RS19495 RPE_RS19495 PF08022 RPE_RS19495 RPE_RS19505 PF07813 LTXXQ motif family protein RPE_RS19510 PF11752 RPE_RS19510 RPE_RS19515 PF05532 CsbD-like RPE_RS19520 PF13581 Histidine kinase-like ATPase domain RPE_RS19525 PF00501 AMP-binding enzyme RPE_RS19525 PF05893 Acyl-CoA reductase (LuxC) RPE_RS19525 PF14535 AMP-binding enzyme C-terminal domain RPE_RS19530 PF04443 RPE_RS19530 RPE_RS19535 PF00501 AMP-binding enzyme RPE_RS19545 PF07690 Major Facilitator Superfamily RPE_RS19550 PF13466 STAS domain RPE_RS19555 PF13581 Histidine kinase-like ATPase domain RPE_RS19560 PF09084 NMT1/THI5 like RPE_RS19565 PF00672 HAMP domain RPE_RS19565 PF02743 Cache domain RPE_RS19565 PF07228 Stage II sporulation protein E (SpoIIE) RPE_RS19575 PF00171 Aldehyde dehydrogenase family RPE_RS19580 PF00732 GMC oxidoreductase RPE_RS19580 PF05199 GMC oxidoreductase RPE_RS19585 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS19590 PF02674 RPE_RS19590 RPE_RS19595 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS19600 PF00072 Response regulator receiver domain RPE_RS19600 PF00196 Bacterial regulatory proteins, luxR family RPE_RS19605 PF03401 Tripartite tricarboxylate transporter family receptor RPE_RS19610 PF00072 Response regulator receiver domain RPE_RS19610 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS19610 PF01627 Hpt domain RPE_RS19610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS19610 PF02743 Cache domain RPE_RS19615 PF00072 Response regulator receiver domain RPE_RS19615 PF00563 EAL domain RPE_RS19625 PF01739 CheR methyltransferase, SAM binding domain RPE_RS19625 PF03705 CheR methyltransferase, all-alpha domain RPE_RS19630 PF01584 CheW-like domain RPE_RS19635 PF00072 Response regulator receiver domain RPE_RS19635 PF01584 CheW-like domain RPE_RS19635 PF01627 Hpt domain RPE_RS19635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS19635 PF02895 Signal transducing histidine kinase, homodimeric domain RPE_RS19640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS19640 PF00672 HAMP domain RPE_RS19645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS19645 PF00672 HAMP domain RPE_RS19650 PF00072 Response regulator receiver domain RPE_RS19655 PF04972 BON domain RPE_RS19660 PF00069 Protein kinase domain RPE_RS19660 PF00582 Universal stress protein family RPE_RS19665 PF12850 Calcineurin-like phosphoesterase superfamily domain RPE_RS19675 PF02310 B12 binding domain RPE_RS19675 PF04055 Radical SAM superfamily RPE_RS19675 PF13353 4Fe-4S single cluster domain RPE_RS19680 PF02830 V4R domain RPE_RS19685 PF04055 Radical SAM superfamily RPE_RS19700 PF02583 Metal-sensitive transcriptional repressor RPE_RS19705 PF00122 E1-E2 ATPase RPE_RS19705 PF00702 haloacid dehalogenase-like hydrolase RPE_RS19705 PF04945 YHS domain RPE_RS19710 PF01814 Hemerythrin HHE cation binding domain RPE_RS19715 PF01242 6-pyruvoyl tetrahydropterin synthase RPE_RS19720 PF00990 GGDEF domain RPE_RS19725 PF01510 N-acetylmuramoyl-L-alanine amidase RPE_RS19740 PF13565 RPE_RS19740 RPE_RS19745 PF13358 DDE superfamily endonuclease RPE_RS19750 PF00005 ABC transporter RPE_RS19755 PF02687 RPE_RS19755 RPE_RS19755 PF12704 MacB-like periplasmic core domain RPE_RS19760 PF16576 RPE_RS19760 RPE_RS19765 PF12697 Alpha/beta hydrolase family RPE_RS19780 PF13430 RPE_RS19780 RPE_RS19785 PF01641 SelR domain RPE_RS19790 PF01625 Peptide methionine sulfoxide reductase RPE_RS19800 PF02142 MGS-like domain RPE_RS19800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPE_RS19800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RPE_RS19805 PF01272 Transcription elongation factor, GreA/GreB, C-term RPE_RS19805 PF03449 Transcription elongation factor, N-terminal RPE_RS19810 PF07681 RPE_RS19810 RPE_RS19815 PF01037 AsnC family RPE_RS19815 PF13412 Winged helix-turn-helix DNA-binding RPE_RS19820 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS19825 PF03466 LysR substrate binding domain RPE_RS19830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPE_RS19850 PF01184 RPE_RS19850 RPE_RS19855 PF17200 RPE_RS19855 RPE_RS19860 PF00005 ABC transporter RPE_RS19860 PF00664 ABC transporter transmembrane region RPE_RS19880 PF03061 Thioesterase superfamily RPE_RS19885 PF00355 Rieske [2Fe-2S] domain RPE_RS19885 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RPE_RS19890 PF03551 Transcriptional regulator PadR-like family RPE_RS19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS19895 PF03466 LysR substrate binding domain RPE_RS19900 PF00753 Metallo-beta-lactamase superfamily RPE_RS19905 PF00578 AhpC/TSA family RPE_RS19905 PF10417 C-terminal domain of 1-Cys peroxiredoxin RPE_RS19910 PF01925 RPE_RS19910 RPE_RS19915 PF03061 Thioesterase superfamily RPE_RS19925 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS19930 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS19935 PF00873 AcrB/AcrD/AcrF family RPE_RS19940 PF16576 RPE_RS19940 RPE_RS19945 PF00072 Response regulator receiver domain RPE_RS19945 PF00486 Transcriptional regulatory protein, C terminal RPE_RS19950 PF00672 HAMP domain RPE_RS19950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS19955 PF01734 Patatin-like phospholipase RPE_RS19960 PF11769 RPE_RS19960 RPE_RS19965 PF00072 Response regulator receiver domain RPE_RS19965 PF00486 Transcriptional regulatory protein, C terminal RPE_RS19970 PF00589 Phage integrase family RPE_RS19970 PF13356 Domain of unknown function (DUF4102) RPE_RS19985 PF01618 RPE_RS19985 RPE_RS20015 PF01636 Phosphotransferase enzyme family RPE_RS20025 PF05598 RPE_RS20025 RPE_RS20045 PF10038 RPE_RS20045 RPE_RS20050 PF03050 RPE_RS20050 RPE_RS20050 PF13005 RPE_RS20050 RPE_RS20050 PF13007 RPE_RS20050 RPE_RS20050 PF13817 RPE_RS20050 RPE_RS20055 PF05717 RPE_RS20055 RPE_RS20060 PF01527 Transposase RPE_RS20065 PF03743 Bacterial conjugation TrbI-like protein RPE_RS20070 PF03524 Conjugal transfer protein RPE_RS20075 PF04335 VirB8 protein RPE_RS20080 PF04610 RPE_RS20080 RPE_RS20095 PF03135 RPE_RS20095 RPE_RS20100 PF05101 RPE_RS20100 RPE_RS20105 PF04956 RPE_RS20105 RPE_RS20110 PF00437 Type II/IV secretion system protein RPE_RS20120 PF02534 Type IV secretory system Conjugative DNA transfer RPE_RS20125 PF11843 RPE_RS20125 RPE_RS20130 PF01464 Transglycosylase SLT domain RPE_RS20135 PF10502 Signal peptidase, peptidase S26 RPE_RS20140 PF11000 RPE_RS20140 RPE_RS20145 PF10134 RPE_RS20145 RPE_RS20150 PF12728 Helix-turn-helix domain RPE_RS20155 PF10074 RPE_RS20155 RPE_RS20160 PF01381 Helix-turn-helix RPE_RS20165 PF05284 RPE_RS20165 RPE_RS20175 PF10686 RPE_RS20175 RPE_RS20180 PF13362 Toprim domain RPE_RS20185 PF13871 RPE_RS20185 RPE_RS20185 PF13872 RPE_RS20185 RPE_RS20190 PF02195 ParB-like nuclease domain RPE_RS20195 PF08401 RPE_RS20195 RPE_RS20205 PF00216 Bacterial DNA-binding protein RPE_RS20215 PF00270 DEAD/DEAH box helicase RPE_RS20225 PF04471 Restriction endonuclease RPE_RS20245 PF08843 Nucleotidyl transferase of unknown function (DUF1814) RPE_RS20250 PF13338 RPE_RS20250 RPE_RS20265 PF13175 AAA ATPase domain RPE_RS20270 PF00580 UvrD/REP helicase N-terminal domain RPE_RS20270 PF13245 Part of AAA domain RPE_RS20270 PF13361 UvrD-like helicase C-terminal domain RPE_RS20295 PF09361 RPE_RS20295 RPE_RS20300 PF09361 RPE_RS20300 RPE_RS20305 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS20305 PF00989 PAS fold RPE_RS20305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS20305 PF13188 PAS domain RPE_RS20310 PF07704 RPE_RS20310 RPE_RS20315 PF01850 PIN domain RPE_RS20330 PF00027 Cyclic nucleotide-binding domain RPE_RS20330 PF13545 Crp-like helix-turn-helix domain RPE_RS20335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS20335 PF00672 HAMP domain RPE_RS20340 PF08984 Domain of unknown function (DUF1858) RPE_RS20345 PF00394 Multicopper oxidase RPE_RS20345 PF07732 Multicopper oxidase RPE_RS20350 PF03781 Sulfatase-modifying factor enzyme 1 RPE_RS20355 PF13343 Bacterial extracellular solute-binding protein RPE_RS20360 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS20375 PF01144 Coenzyme A transferase RPE_RS20380 PF01144 Coenzyme A transferase RPE_RS20385 PF05170 RPE_RS20385 RPE_RS20385 PF13502 RPE_RS20385 RPE_RS20395 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS20400 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS20405 PF00005 ABC transporter RPE_RS20405 PF08402 TOBE domain RPE_RS20410 PF00563 EAL domain RPE_RS20410 PF00990 GGDEF domain RPE_RS20410 PF08448 PAS fold RPE_RS20410 PF12860 RPE_RS20410 RPE_RS20415 PF01266 FAD dependent oxidoreductase RPE_RS20420 PF04325 Protein of unknown function (DUF465) RPE_RS20425 PF04325 Protein of unknown function (DUF465) RPE_RS20430 PF00990 GGDEF domain RPE_RS20435 PF00731 AIR carboxylase RPE_RS20440 PF02222 ATP-grasp domain RPE_RS20445 PF01165 Ribosomal protein S21 RPE_RS20450 PF07238 PilZ domain RPE_RS20455 PF10098 RPE_RS20455 RPE_RS20465 PF01699 Sodium/calcium exchanger protein RPE_RS20470 PF02233 NAD(P) transhydrogenase beta subunit RPE_RS20475 PF12769 Domain of unknown function (DUF3814) RPE_RS20480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RPE_RS20480 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RPE_RS20485 PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV RPE_RS20490 PF02661 Fic/DOC family RPE_RS20495 PF04014 Antidote-toxin recognition MazE RPE_RS20500 PF01432 Peptidase family M3 RPE_RS20500 PF08439 Oligopeptidase F RPE_RS20505 PF03741 RPE_RS20505 RPE_RS20510 PF00072 Response regulator receiver domain RPE_RS20510 PF00158 Sigma-54 interaction domain RPE_RS20510 PF02954 Bacterial regulatory protein, Fis family RPE_RS20515 PF01471 Putative peptidoglycan binding domain RPE_RS20515 PF03734 L,D-transpeptidase catalytic domain RPE_RS20520 PF05951 RPE_RS20520 RPE_RS20525 PF10073 RPE_RS20525 RPE_RS20530 PF06844 Protein of unknown function (DUF1244) RPE_RS20535 PF06282 RPE_RS20535 RPE_RS20540 PF00224 Pyruvate kinase, barrel domain RPE_RS20540 PF02887 Pyruvate kinase, alpha/beta domain RPE_RS20550 PF02566 OsmC-like protein RPE_RS20555 PF12697 Alpha/beta hydrolase family RPE_RS20560 PF13432 Tetratricopeptide repeat RPE_RS20565 PF00444 Ribosomal protein L36 RPE_RS20575 PF03401 Tripartite tricarboxylate transporter family receptor RPE_RS20580 PF01575 MaoC like domain RPE_RS20585 PF13452 N-terminal half of MaoC dehydratase RPE_RS20590 PF01614 Bacterial transcriptional regulator RPE_RS20590 PF09339 IclR helix-turn-helix domain RPE_RS20595 PF04909 Amidohydrolase RPE_RS20600 PF04073 Aminoacyl-tRNA editing domain RPE_RS20615 PF01943 RPE_RS20615 RPE_RS20615 PF14667 Polysaccharide biosynthesis C-terminal domain RPE_RS20620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS20620 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS20620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS20625 PF00378 Enoyl-CoA hydratase/isomerase family RPE_RS20630 PF00075 RNase H RPE_RS20635 PF01636 Phosphotransferase enzyme family RPE_RS20640 PF02401 LytB protein RPE_RS20645 PF06242 RPE_RS20645 RPE_RS20660 PF06146 RPE_RS20660 RPE_RS20665 PF12071 RPE_RS20665 RPE_RS20670 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RPE_RS20675 PF01850 PIN domain RPE_RS20695 PF00709 Adenylosuccinate synthetase RPE_RS20700 PF15723 RPE_RS20700 RPE_RS20705 PF15731 RPE_RS20705 RPE_RS20710 PF03264 NapC/NirT cytochrome c family, N-terminal region RPE_RS20715 PF00034 Cytochrome c RPE_RS20715 PF03150 Di-haem cytochrome c peroxidase RPE_RS20720 PF00563 EAL domain RPE_RS20720 PF00990 GGDEF domain RPE_RS20720 PF12860 RPE_RS20720 RPE_RS20725 PF00753 Metallo-beta-lactamase superfamily RPE_RS20725 PF07521 RNA-metabolising metallo-beta-lactamase RPE_RS20725 PF10996 Beta-Casp domain RPE_RS20730 PF00156 Phosphoribosyl transferase domain RPE_RS20730 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RPE_RS20735 PF00591 Glycosyl transferase family, a/b domain RPE_RS20735 PF02885 Glycosyl transferase family, helical bundle domain RPE_RS20735 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RPE_RS20745 PF00248 Aldo/keto reductase family RPE_RS20750 PF04073 Aminoacyl-tRNA editing domain RPE_RS20760 PF00892 EamA-like transporter family RPE_RS20765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS20765 PF08447 PAS fold RPE_RS20770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS20770 PF00672 HAMP domain RPE_RS20775 PF02915 Rubrerythrin RPE_RS20780 PF13449 Esterase-like activity of phytase RPE_RS20785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS20785 PF00672 HAMP domain RPE_RS20785 PF17200 RPE_RS20785 RPE_RS20790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS20790 PF00672 HAMP domain RPE_RS20790 PF17200 RPE_RS20790 RPE_RS20795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPE_RS20795 PF01842 ACT domain RPE_RS20795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPE_RS20805 PF00583 Acetyltransferase (GNAT) family RPE_RS20810 PF00043 Glutathione S-transferase, C-terminal domain RPE_RS20810 PF02798 Glutathione S-transferase, N-terminal domain RPE_RS20815 PF13505 Outer membrane protein beta-barrel domain RPE_RS20820 PF13505 Outer membrane protein beta-barrel domain RPE_RS20825 PF07690 Major Facilitator Superfamily RPE_RS20830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPE_RS20830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPE_RS20830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPE_RS20830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPE_RS20835 PF01070 FMN-dependent dehydrogenase RPE_RS20840 PF01488 Shikimate / quinate 5-dehydrogenase RPE_RS20840 PF08501 Shikimate dehydrogenase substrate binding domain RPE_RS20845 PF13560 Helix-turn-helix domain RPE_RS20850 PF00009 Elongation factor Tu GTP binding domain RPE_RS20850 PF00679 Elongation factor G C-terminus RPE_RS20850 PF03764 Elongation factor G, domain IV RPE_RS20850 PF14492 Elongation Factor G, domain II RPE_RS20855 PF06186 RPE_RS20855 RPE_RS20860 PF06186 RPE_RS20860 RPE_RS20865 PF00155 Aminotransferase class I and II RPE_RS20870 PF00043 Glutathione S-transferase, C-terminal domain RPE_RS20870 PF02798 Glutathione S-transferase, N-terminal domain RPE_RS20880 PF07995 Glucose / Sorbosone dehydrogenase RPE_RS20885 PF04342 RPE_RS20885 RPE_RS20890 PF01553 Acyltransferase RPE_RS20895 PF00248 Aldo/keto reductase family RPE_RS20910 PF13419 Haloacid dehalogenase-like hydrolase RPE_RS20915 PF13410 Glutathione S-transferase, C-terminal domain RPE_RS20915 PF13417 Glutathione S-transferase, N-terminal domain RPE_RS20920 PF00043 Glutathione S-transferase, C-terminal domain RPE_RS20920 PF02798 Glutathione S-transferase, N-terminal domain RPE_RS20925 PF13202 EF hand RPE_RS20925 PF13833 EF-hand domain pair RPE_RS20930 PF00753 Metallo-beta-lactamase superfamily RPE_RS20930 PF14863 Alkyl sulfatase dimerisation RPE_RS20930 PF14864 Alkyl sulfatase C-terminal RPE_RS20940 PF00271 Helicase conserved C-terminal domain RPE_RS20940 PF02151 UvrB/uvrC motif RPE_RS20940 PF04851 Type III restriction enzyme, res subunit RPE_RS20940 PF12344 Ultra-violet resistance protein B RPE_RS20945 PF06823 RPE_RS20945 RPE_RS20955 PF05973 RPE_RS20955 RPE_RS20965 PF08972 Domain of unknown function (DUF1902) RPE_RS20970 PF07927 YcfA-like protein RPE_RS20975 PF00108 Thiolase, N-terminal domain RPE_RS20975 PF02803 Thiolase, C-terminal domain RPE_RS20980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS20980 PF00672 HAMP domain RPE_RS21000 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RPE_RS21000 PF05221 S-adenosyl-L-homocysteine hydrolase RPE_RS21005 PF00438 S-adenosylmethionine synthetase, N-terminal domain RPE_RS21005 PF02772 S-adenosylmethionine synthetase, central domain RPE_RS21005 PF02773 S-adenosylmethionine synthetase, C-terminal domain RPE_RS21015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPE_RS21015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPE_RS21015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPE_RS21020 PF00656 Caspase domain RPE_RS21020 PF13414 TPR repeat RPE_RS21020 PF13432 Tetratricopeptide repeat RPE_RS21030 PF01717 Cobalamin-independent synthase, Catalytic domain RPE_RS21035 PF00005 ABC transporter RPE_RS21040 PF00005 ABC transporter RPE_RS21040 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS21045 PF02653 RPE_RS21045 RPE_RS21050 PF02653 RPE_RS21050 RPE_RS21055 PF01548 RPE_RS21055 RPE_RS21055 PF02371 RPE_RS21055 RPE_RS21060 PF13458 Periplasmic binding protein RPE_RS21070 PF00953 Glycosyl transferase family 4 RPE_RS21075 PF02719 Polysaccharide biosynthesis protein RPE_RS21080 PF00551 Formyl transferase RPE_RS21080 PF01842 ACT domain RPE_RS21085 PF02602 Uroporphyrinogen-III synthase HemD RPE_RS21090 PF13458 Periplasmic binding protein RPE_RS21095 PF02653 RPE_RS21095 RPE_RS21100 PF02653 RPE_RS21100 RPE_RS21105 PF00005 ABC transporter RPE_RS21105 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS21110 PF00005 ABC transporter RPE_RS21115 PF00005 ABC transporter RPE_RS21115 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS21120 PF00501 AMP-binding enzyme RPE_RS21125 PF04480 Protein of unknown function (DUF559) RPE_RS21130 PF02653 RPE_RS21130 RPE_RS21135 PF02653 RPE_RS21135 RPE_RS21140 PF13458 Periplasmic binding protein RPE_RS21145 PF00005 ABC transporter RPE_RS21150 PF00534 Glycosyl transferases group 1 RPE_RS21150 PF13477 Glycosyl transferase 4-like RPE_RS21155 PF00171 Aldehyde dehydrogenase family RPE_RS21160 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS21165 PF03102 NeuB family RPE_RS21165 PF13144 SAF-like RPE_RS21170 PF05159 RPE_RS21170 RPE_RS21175 PF00456 Transketolase, thiamine diphosphate binding domain RPE_RS21175 PF02779 Transketolase, pyrimidine binding domain RPE_RS21175 PF02780 Transketolase, C-terminal domain RPE_RS21180 PF02348 Cytidylyltransferase RPE_RS21185 PF08282 haloacid dehalogenase-like hydrolase RPE_RS21190 PF13579 Glycosyl transferase 4-like domain RPE_RS21190 PF13692 Glycosyl transferases group 1 RPE_RS21195 PF05050 Methyltransferase FkbM domain RPE_RS21200 PF13578 Methyltransferase domain RPE_RS21210 PF04989 Cephalosporin hydroxylase RPE_RS21225 PF00005 ABC transporter RPE_RS21225 PF14524 Wzt C-terminal domain RPE_RS21230 PF01061 RPE_RS21230 RPE_RS21235 PF00534 Glycosyl transferases group 1 RPE_RS21245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPE_RS21250 PF00483 Nucleotidyl transferase RPE_RS21255 PF16363 RPE_RS21255 RPE_RS21260 PF08421 Putative zinc binding domain RPE_RS21260 PF08484 C-methyltransferase C-terminal domain RPE_RS21260 PF13489 Methyltransferase domain RPE_RS21265 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RPE_RS21270 PF00132 Bacterial transferase hexapeptide (six repeats) RPE_RS21275 PF16822 RPE_RS21275 RPE_RS21280 PF03062 RPE_RS21280 RPE_RS21285 PF16363 RPE_RS21285 RPE_RS21290 PF16363 RPE_RS21290 RPE_RS21300 PF07690 Major Facilitator Superfamily RPE_RS21305 PF00771 FHIPEP family RPE_RS21315 PF10099 RPE_RS21315 RPE_RS21320 PF04542 Sigma-70 region 2 RPE_RS21320 PF08281 Sigma-70, region 4 RPE_RS21325 PF02050 Flagellar FliJ protein RPE_RS21330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPE_RS21335 PF00072 Response regulator receiver domain RPE_RS21335 PF00486 Transcriptional regulatory protein, C terminal RPE_RS21340 PF16363 RPE_RS21340 RPE_RS21345 PF00483 Nucleotidyl transferase RPE_RS21345 PF01050 Mannose-6-phosphate isomerase RPE_RS21350 PF04138 RPE_RS21350 RPE_RS21355 PF01810 RPE_RS21355 RPE_RS21360 PF01841 Transglutaminase-like superfamily RPE_RS21365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS21365 PF00672 HAMP domain RPE_RS21365 PF08447 PAS fold RPE_RS21375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPE_RS21375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPE_RS21375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPE_RS21375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPE_RS21380 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) RPE_RS21385 PF01739 CheR methyltransferase, SAM binding domain RPE_RS21385 PF03705 CheR methyltransferase, all-alpha domain RPE_RS21390 PF00072 Response regulator receiver domain RPE_RS21390 PF01339 CheB methylesterase RPE_RS21395 PF00072 Response regulator receiver domain RPE_RS21400 PF01584 CheW-like domain RPE_RS21405 PF00072 Response regulator receiver domain RPE_RS21405 PF01584 CheW-like domain RPE_RS21405 PF01627 Hpt domain RPE_RS21405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS21405 PF02895 Signal transducing histidine kinase, homodimeric domain RPE_RS21410 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) RPE_RS21415 PF00459 Inositol monophosphatase family RPE_RS21425 PF06577 RPE_RS21425 RPE_RS21440 PF01475 Ferric uptake regulator family RPE_RS21445 PF00005 ABC transporter RPE_RS21450 PF02361 Cobalt transport protein RPE_RS21460 PF01891 Cobalt uptake substrate-specific transmembrane region RPE_RS21465 PF10670 RPE_RS21465 RPE_RS21475 PF08666 SAF domain RPE_RS21475 PF16976 RPE_RS21475 RPE_RS21485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS21485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPE_RS21490 PF03734 L,D-transpeptidase catalytic domain RPE_RS21495 PF11150 RPE_RS21495 RPE_RS21500 PF01435 Peptidase family M48 RPE_RS21505 PF05987 RPE_RS21505 RPE_RS21510 PF00205 Thiamine pyrophosphate enzyme, central domain RPE_RS21510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPE_RS21510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPE_RS21515 PF13452 N-terminal half of MaoC dehydratase RPE_RS21520 PF02515 CoA-transferase family III RPE_RS21525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS21525 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS21525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS21530 PF00067 Cytochrome P450 RPE_RS21535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS21535 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS21535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS21540 PF00106 short chain dehydrogenase RPE_RS21545 PF03006 RPE_RS21545 RPE_RS21550 PF04317 RPE_RS21550 RPE_RS21555 PF05128 RPE_RS21555 RPE_RS21560 PF00313 'Cold-shock' DNA-binding domain RPE_RS21570 PF00171 Aldehyde dehydrogenase family RPE_RS21570 PF01619 Proline dehydrogenase RPE_RS21570 PF14850 DNA-binding domain of Proline dehydrogenase RPE_RS21575 PF02515 CoA-transferase family III RPE_RS21585 PF04536 TLP18 RPE_RS21590 PF04536 TLP18 RPE_RS21595 PF04011 LemA family RPE_RS21600 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS21600 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPE_RS21605 PF00501 AMP-binding enzyme RPE_RS21605 PF13193 AMP-binding enzyme C-terminal domain RPE_RS21610 PF12616 RPE_RS21610 RPE_RS21615 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPE_RS21620 PF13417 Glutathione S-transferase, N-terminal domain RPE_RS21625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPE_RS21630 PF00534 Glycosyl transferases group 1 RPE_RS21630 PF13439 Glycosyltransferase Family 4 RPE_RS21635 PF00534 Glycosyl transferases group 1 RPE_RS21635 PF13439 Glycosyltransferase Family 4 RPE_RS21640 PF04932 RPE_RS21640 RPE_RS21650 PF03098 Animal haem peroxidase RPE_RS21685 PF01551 Peptidase family M23 RPE_RS21690 PF08450 SMP-30/Gluconolaconase/LRE-like region RPE_RS21695 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS21695 PF02861 Clp amino terminal domain RPE_RS21695 PF07724 AAA domain (Cdc48 subfamily) RPE_RS21695 PF10431 C-terminal, D2-small domain, of ClpB protein RPE_RS21700 PF05257 CHAP domain RPE_RS21705 PF07021 Methionine biosynthesis protein MetW RPE_RS21710 PF00561 alpha/beta hydrolase fold RPE_RS21715 PF01817 Chorismate mutase type II RPE_RS21720 PF00155 Aminotransferase class I and II RPE_RS21725 PF02153 Prephenate dehydrogenase RPE_RS21735 PF07883 Cupin domain RPE_RS21740 PF15919 RPE_RS21740 RPE_RS21745 PF01544 CorA-like Mg2+ transporter protein RPE_RS21750 PF03734 L,D-transpeptidase catalytic domain RPE_RS21755 PF06904 RPE_RS21755 RPE_RS21760 PF00501 AMP-binding enzyme RPE_RS21760 PF13193 AMP-binding enzyme C-terminal domain RPE_RS21765 PF04480 Protein of unknown function (DUF559) RPE_RS21770 PF07386 RPE_RS21770 RPE_RS21775 PF00753 Metallo-beta-lactamase superfamily RPE_RS21780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPE_RS21780 PF02770 Acyl-CoA dehydrogenase, middle domain RPE_RS21780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPE_RS21785 PF00925 GTP cyclohydrolase II RPE_RS21785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RPE_RS21790 PF02627 Carboxymuconolactone decarboxylase family RPE_RS21795 PF11127 Protein of unknown function (DUF2892) RPE_RS21800 PF00027 Cyclic nucleotide-binding domain RPE_RS21800 PF13545 Crp-like helix-turn-helix domain RPE_RS21805 PF13180 PDZ domain RPE_RS21805 PF13365 Trypsin-like peptidase domain RPE_RS21810 PF01381 Helix-turn-helix RPE_RS21815 PF00920 Dehydratase family RPE_RS21820 PF10649 RPE_RS21820 RPE_RS21825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS21830 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RPE_RS21830 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RPE_RS21835 PF10649 RPE_RS21835 RPE_RS21845 PF03960 ArsC family RPE_RS21850 PF01936 NYN domain RPE_RS21850 PF12872 OST-HTH/LOTUS domain RPE_RS21855 PF14362 RPE_RS21855 RPE_RS21860 PF00691 OmpA family RPE_RS21860 PF13677 RPE_RS21860 RPE_RS21865 PF14362 RPE_RS21865 RPE_RS21870 PF13450 NAD(P)-binding Rossmann-like domain RPE_RS21875 PF13450 NAD(P)-binding Rossmann-like domain RPE_RS21880 PF00211 Adenylate and Guanylate cyclase catalytic domain RPE_RS21880 PF13191 AAA ATPase domain RPE_RS21895 PF01300 Telomere recombination RPE_RS21895 PF03481 Putative GTP-binding controlling metal-binding RPE_RS21900 PF01565 FAD binding domain RPE_RS21900 PF02913 FAD linked oxidases, C-terminal domain RPE_RS21905 PF13191 AAA ATPase domain RPE_RS21910 PF02586 Uncharacterised ACR, COG2135 RPE_RS21920 PF00293 NUDIX domain RPE_RS21925 PF09539 RPE_RS21925 RPE_RS21935 PF05598 RPE_RS21935 RPE_RS21935 PF13751 RPE_RS21935 RPE_RS21940 PF01979 Amidohydrolase family RPE_RS21945 PF01571 Aminomethyltransferase folate-binding domain RPE_RS21945 PF08669 Glycine cleavage T-protein C-terminal barrel domain RPE_RS21950 PF03352 Methyladenine glycosylase RPE_RS21960 PF00782 Dual specificity phosphatase, catalytic domain RPE_RS21970 PF04773 FecR protein RPE_RS21975 PF00211 Adenylate and Guanylate cyclase catalytic domain RPE_RS21975 PF05226 RPE_RS21975 RPE_RS21985 PF00107 Zinc-binding dehydrogenase RPE_RS21985 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS21990 PF02445 Quinolinate synthetase A protein RPE_RS21995 PF00890 FAD binding domain RPE_RS21995 PF02910 Fumarate reductase flavoprotein C-term RPE_RS22000 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RPE_RS22000 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RPE_RS22010 PF07486 Cell Wall Hydrolase RPE_RS22015 PF00391 PEP-utilising enzyme, mobile domain RPE_RS22015 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RPE_RS22015 PF02896 PEP-utilising enzyme, TIM barrel domain RPE_RS22020 PF06823 RPE_RS22020 RPE_RS22030 PF02092 RPE_RS22030 RPE_RS22030 PF05746 DALR anticodon binding domain RPE_RS22035 PF04480 Protein of unknown function (DUF559) RPE_RS22040 PF02091 Glycyl-tRNA synthetase alpha subunit RPE_RS22050 PF01343 Peptidase family S49 RPE_RS22055 PF05175 Methyltransferase small domain RPE_RS22060 PF09413 Domain of unknown function (DUF2007) RPE_RS22065 PF00348 Polyprenyl synthetase RPE_RS22075 PF00288 GHMP kinases N terminal domain RPE_RS22075 PF08544 GHMP kinases C terminal RPE_RS22080 PF13176 Tetratricopeptide repeat RPE_RS22080 PF13414 TPR repeat RPE_RS22085 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase RPE_RS22085 PF13450 NAD(P)-binding Rossmann-like domain RPE_RS22090 PF03167 Uracil DNA glycosylase superfamily RPE_RS22095 PF13231 RPE_RS22095 RPE_RS22100 PF01351 Ribonuclease HII RPE_RS22105 PF04055 Radical SAM superfamily RPE_RS22115 PF00583 Acetyltransferase (GNAT) family RPE_RS22115 PF12802 MarR family RPE_RS22120 PF00994 Probable molybdopterin binding domain RPE_RS22125 PF04228 RPE_RS22125 RPE_RS22130 PF01555 DNA methylase RPE_RS22140 PF00633 Helix-hairpin-helix motif RPE_RS22140 PF00730 HhH-GPD superfamily base excision DNA repair protein RPE_RS22140 PF14815 NUDIX domain RPE_RS22145 PF01381 Helix-turn-helix RPE_RS22150 PF05258 RPE_RS22150 RPE_RS22155 PF13462 Thioredoxin RPE_RS22170 PF01435 Peptidase family M48 RPE_RS22175 PF04011 LemA family RPE_RS22180 PF09243 RPE_RS22180 RPE_RS22185 PF02463 RecF/RecN/SMC N terminal domain RPE_RS22205 PF00117 Glutamine amidotransferase class-I RPE_RS22205 PF00425 chorismate binding enzyme RPE_RS22205 PF04715 Anthranilate synthase component I, N terminal region RPE_RS22215 PF05866 Endodeoxyribonuclease RusA RPE_RS22220 PF13489 Methyltransferase domain RPE_RS22225 PF03109 RPE_RS22225 RPE_RS22235 PF03831 PhnA protein RPE_RS22245 PF00501 AMP-binding enzyme RPE_RS22245 PF13193 AMP-binding enzyme C-terminal domain RPE_RS22245 PF16177 RPE_RS22245 RPE_RS22255 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS22265 PF04055 Radical SAM superfamily RPE_RS22270 PF08905 RPE_RS22270 RPE_RS22275 PF06808 RPE_RS22275 RPE_RS22280 PF16868 RPE_RS22280 RPE_RS22285 PF03401 Tripartite tricarboxylate transporter family receptor RPE_RS22290 PF00112 Papain family cysteine protease RPE_RS22295 PF00563 EAL domain RPE_RS22310 PF13243 Prenyltransferase-like RPE_RS22310 PF13249 Prenyltransferase-like RPE_RS22325 PF00293 NUDIX domain RPE_RS22330 PF03061 Thioesterase superfamily RPE_RS22335 PF01381 Helix-turn-helix RPE_RS22345 PF07804 HipA-like C-terminal domain RPE_RS22345 PF07805 HipA-like N-terminal domain RPE_RS22345 PF13657 HipA N-terminal domain RPE_RS22350 PF13560 Helix-turn-helix domain RPE_RS22365 PF03884 Domain of unknown function (DUF329) RPE_RS22370 PF02545 Maf-like protein RPE_RS22375 PF13175 AAA ATPase domain RPE_RS22375 PF13304 AAA domain RPE_RS22380 PF01451 Low molecular weight phosphotyrosine protein phosphatase RPE_RS22385 PF06793 RPE_RS22385 RPE_RS22390 PF00815 Histidinol dehydrogenase RPE_RS22395 PF01609 Transposase DDE domain RPE_RS22395 PF13808 RPE_RS22395 RPE_RS22405 PF11164 RPE_RS22405 RPE_RS22410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RPE_RS22420 PF00561 alpha/beta hydrolase fold RPE_RS22430 PF00561 alpha/beta hydrolase fold RPE_RS22435 PF07110 EthD domain RPE_RS22440 PF00027 Cyclic nucleotide-binding domain RPE_RS22440 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPE_RS22455 PF00196 Bacterial regulatory proteins, luxR family RPE_RS22460 PF00196 Bacterial regulatory proteins, luxR family RPE_RS22465 PF07378 RPE_RS22465 RPE_RS22470 PF00669 Bacterial flagellin N-terminal helical region RPE_RS22470 PF07482 RPE_RS22470 RPE_RS22475 PF03193 Protein of unknown function, DUF258 RPE_RS22480 PF03091 CutA1 divalent ion tolerance protein RPE_RS22485 PF09723 RPE_RS22485 RPE_RS22490 PF03747 ADP-ribosylglycohydrolase RPE_RS22490 PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) RPE_RS22500 PF11899 RPE_RS22500 RPE_RS22505 PF13649 Methyltransferase domain RPE_RS22510 PF00893 Small Multidrug Resistance protein RPE_RS22515 PF01544 CorA-like Mg2+ transporter protein RPE_RS22520 PF00293 NUDIX domain RPE_RS22530 PF10649 RPE_RS22530 RPE_RS22535 PF03459 TOBE domain RPE_RS22540 PF00578 AhpC/TSA family RPE_RS22545 PF02627 Carboxymuconolactone decarboxylase family RPE_RS22550 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase RPE_RS22555 PF01494 FAD binding domain RPE_RS22560 PF00766 Electron transfer flavoprotein FAD-binding domain RPE_RS22560 PF01012 Electron transfer flavoprotein domain RPE_RS22565 PF01012 Electron transfer flavoprotein domain RPE_RS22570 PF03206 RPE_RS22570 RPE_RS22575 PF00682 HMGL-like RPE_RS22580 PF00266 Aminotransferase class-V RPE_RS22585 PF01106 NifU-like domain RPE_RS22585 PF01592 NifU-like N terminal domain RPE_RS22585 PF04324 BFD-like [2Fe-2S] binding domain RPE_RS22590 PF01521 Iron-sulphur cluster biosynthesis RPE_RS22595 PF04891 RPE_RS22595 RPE_RS22600 PF12838 4Fe-4S dicluster domain RPE_RS22605 PF05082 Rop-like RPE_RS22610 PF03270 Protein of unknown function, DUF269 RPE_RS22615 PF02579 Dinitrogenase iron-molybdenum cofactor RPE_RS22620 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS22625 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS22625 PF04324 BFD-like [2Fe-2S] binding domain RPE_RS22630 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS22630 PF11844 Domain of unknown function (DUF3364) RPE_RS22635 PF00148 Nitrogenase component 1 type Oxidoreductase RPE_RS22640 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RPE_RS22645 PF13289 RPE_RS22645 RPE_RS22650 PF06988 NifT/FixU protein RPE_RS22655 PF04319 RPE_RS22655 RPE_RS22660 PF04319 RPE_RS22660 RPE_RS22670 PF01521 Iron-sulphur cluster biosynthesis RPE_RS22675 PF00037 4Fe-4S binding domain RPE_RS22680 PF02579 Dinitrogenase iron-molybdenum cofactor RPE_RS22680 PF04055 Radical SAM superfamily RPE_RS22685 PF00037 4Fe-4S binding domain RPE_RS22690 PF00158 Sigma-54 interaction domain RPE_RS22690 PF01590 GAF domain RPE_RS22690 PF02954 Bacterial regulatory protein, Fis family RPE_RS22695 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS22705 PF00501 AMP-binding enzyme RPE_RS22705 PF13193 AMP-binding enzyme C-terminal domain RPE_RS22710 PF00556 Antenna complex alpha/beta subunit RPE_RS22715 PF00556 Antenna complex alpha/beta subunit RPE_RS22720 PF00211 Adenylate and Guanylate cyclase catalytic domain RPE_RS22720 PF00672 HAMP domain RPE_RS22725 PF11373 RPE_RS22725 RPE_RS22730 PF00083 Sugar (and other) transporter RPE_RS22735 PF02358 Trehalose-phosphatase RPE_RS22740 PF00982 Glycosyltransferase family 20 RPE_RS22750 PF05860 haemagglutination activity domain RPE_RS22750 PF12545 RPE_RS22750 RPE_RS22755 PF04773 FecR protein RPE_RS22755 PF16220 RPE_RS22755 RPE_RS22755 PF16344 RPE_RS22755 RPE_RS22760 PF04542 Sigma-70 region 2 RPE_RS22760 PF08281 Sigma-70, region 4 RPE_RS22770 PF01292 Prokaryotic cytochrome b561 RPE_RS22775 PF13202 EF hand RPE_RS22775 PF13833 EF-hand domain pair RPE_RS22780 PF00072 Response regulator receiver domain RPE_RS22780 PF00486 Transcriptional regulatory protein, C terminal RPE_RS22785 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS22785 PF00672 HAMP domain RPE_RS22785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS22790 PF00892 EamA-like transporter family RPE_RS22815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS22815 PF00672 HAMP domain RPE_RS22820 PF00111 2Fe-2S iron-sulfur cluster binding domain RPE_RS22820 PF01799 [2Fe-2S] binding domain RPE_RS22825 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS22825 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPE_RS22830 PF00941 FAD binding domain in molybdopterin dehydrogenase RPE_RS22835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS22845 PF16357 RPE_RS22845 RPE_RS22850 PF10029 RPE_RS22850 RPE_RS22855 PF10670 RPE_RS22855 RPE_RS22860 PF02424 ApbE family RPE_RS22865 PF13640 2OG-Fe(II) oxygenase superfamily RPE_RS22870 PF00593 TonB dependent receptor RPE_RS22870 PF07715 TonB-dependent Receptor Plug Domain RPE_RS22875 PF01618 RPE_RS22875 RPE_RS22880 PF02472 Biopolymer transport protein ExbD/TolR RPE_RS22885 PF03544 Gram-negative bacterial TonB protein C-terminal RPE_RS22890 PF01043 SecA preprotein cross-linking domain RPE_RS22890 PF07516 SecA Wing and Scaffold domain RPE_RS22890 PF07517 SecA DEAD-like domain RPE_RS22900 PF00924 Mechanosensitive ion channel RPE_RS22905 PF12275 RPE_RS22905 RPE_RS22910 PF00501 AMP-binding enzyme RPE_RS22910 PF13193 AMP-binding enzyme C-terminal domain RPE_RS22915 PF09955 RPE_RS22915 RPE_RS22920 PF05598 RPE_RS22920 RPE_RS22920 PF13751 RPE_RS22920 RPE_RS22925 PF01264 Chorismate synthase RPE_RS22930 PF00300 Histidine phosphatase superfamily (branch 1) RPE_RS22935 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS22940 PF00226 DnaJ domain RPE_RS22940 PF01556 DnaJ C terminal domain RPE_RS22945 PF16998 RPE_RS22945 RPE_RS22950 PF01243 Pyridoxamine 5'-phosphate oxidase RPE_RS22950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RPE_RS22955 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS22960 PF09723 RPE_RS22960 RPE_RS22965 PF03069 Acetamidase/Formamidase family RPE_RS22970 PF00005 ABC transporter RPE_RS22975 PF00005 ABC transporter RPE_RS22975 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPE_RS22980 PF02653 RPE_RS22980 RPE_RS22985 PF02653 RPE_RS22985 RPE_RS22990 PF13433 Periplasmic binding protein domain RPE_RS22995 PF00072 Response regulator receiver domain RPE_RS22995 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS22995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS23000 PF00072 Response regulator receiver domain RPE_RS23000 PF00196 Bacterial regulatory proteins, luxR family RPE_RS23010 PF07332 RPE_RS23010 RPE_RS23020 PF12277 RPE_RS23020 RPE_RS23025 PF00501 AMP-binding enzyme RPE_RS23025 PF13193 AMP-binding enzyme C-terminal domain RPE_RS23035 PF13545 Crp-like helix-turn-helix domain RPE_RS23040 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RPE_RS23040 PF02843 Phosphoribosylglycinamide synthetase, C domain RPE_RS23040 PF02844 Phosphoribosylglycinamide synthetase, N domain RPE_RS23045 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RPE_RS23050 PF13601 Winged helix DNA-binding domain RPE_RS23060 PF12146 Putative lysophospholipase RPE_RS23065 PF02601 RPE_RS23065 RPE_RS23065 PF13742 RPE_RS23065 RPE_RS23070 PF02685 Glucokinase RPE_RS23075 PF00232 Glycosyl hydrolase family 1 RPE_RS23090 PF00144 Beta-lactamase RPE_RS23095 PF03733 RPE_RS23095 RPE_RS23100 PF09604 RPE_RS23100 RPE_RS23105 PF03814 RPE_RS23105 RPE_RS23110 PF00122 E1-E2 ATPase RPE_RS23110 PF00702 haloacid dehalogenase-like hydrolase RPE_RS23115 PF02669 RPE_RS23115 RPE_RS23120 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS23120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS23120 PF02702 Osmosensitive K+ channel His kinase sensor domain RPE_RS23120 PF13492 GAF domain RPE_RS23120 PF13493 Domain of unknown function (DUF4118) RPE_RS23125 PF00072 Response regulator receiver domain RPE_RS23125 PF00486 Transcriptional regulatory protein, C terminal RPE_RS23130 PF00027 Cyclic nucleotide-binding domain RPE_RS23130 PF13545 Crp-like helix-turn-helix domain RPE_RS23135 PF00211 Adenylate and Guanylate cyclase catalytic domain RPE_RS23135 PF13191 AAA ATPase domain RPE_RS23140 PF00067 Cytochrome P450 RPE_RS23150 PF04261 Dyp-type peroxidase family RPE_RS23155 PF03006 RPE_RS23155 RPE_RS23160 PF02560 Cyanate lyase C-terminal domain RPE_RS23165 PF00005 ABC transporter RPE_RS23170 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS23175 PF13379 NMT1-like family RPE_RS23180 PF00158 Sigma-54 interaction domain RPE_RS23180 PF00989 PAS fold RPE_RS23180 PF13188 PAS domain RPE_RS23195 PF13365 Trypsin-like peptidase domain RPE_RS23205 PF13091 PLD-like domain RPE_RS23205 PF13365 Trypsin-like peptidase domain RPE_RS23210 PF07690 Major Facilitator Superfamily RPE_RS23215 PF11390 RPE_RS23215 RPE_RS23220 PF02634 FdhD/NarQ family RPE_RS23225 PF00384 Molybdopterin oxidoreductase RPE_RS23225 PF01568 Molydopterin dinucleotide binding domain RPE_RS23225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPE_RS23225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPE_RS23225 PF13510 2Fe-2S iron-sulfur cluster binding domain RPE_RS23230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RPE_RS23230 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPE_RS23235 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RPE_RS23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPE_RS23240 PF03466 LysR substrate binding domain RPE_RS23245 PF00873 AcrB/AcrD/AcrF family RPE_RS23250 PF16576 RPE_RS23250 RPE_RS23255 PF01022 Bacterial regulatory protein, arsR family RPE_RS23260 PF11127 Protein of unknown function (DUF2892) RPE_RS23265 PF05235 CHAD domain RPE_RS23270 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS23270 PF00672 HAMP domain RPE_RS23270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS23275 PF00072 Response regulator receiver domain RPE_RS23275 PF00486 Transcriptional regulatory protein, C terminal RPE_RS23280 PF01292 Prokaryotic cytochrome b561 RPE_RS23285 PF00873 AcrB/AcrD/AcrF family RPE_RS23290 PF00529 HlyD family secretion protein RPE_RS23290 PF16576 RPE_RS23290 RPE_RS23295 PF13115 RPE_RS23295 RPE_RS23305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS23310 PF08447 PAS fold RPE_RS23315 PF12698 ABC-2 family transporter protein RPE_RS23320 PF00005 ABC transporter RPE_RS23320 PF12698 ABC-2 family transporter protein RPE_RS23325 PF13437 HlyD family secretion protein RPE_RS23325 PF13533 Biotin-lipoyl like RPE_RS23330 PF00440 Bacterial regulatory proteins, tetR family RPE_RS23340 PF00072 Response regulator receiver domain RPE_RS23340 PF01339 CheB methylesterase RPE_RS23345 PF01739 CheR methyltransferase, SAM binding domain RPE_RS23345 PF03705 CheR methyltransferase, all-alpha domain RPE_RS23350 PF01584 CheW-like domain RPE_RS23355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS23355 PF00672 HAMP domain RPE_RS23360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS23360 PF00672 HAMP domain RPE_RS23365 PF01584 CheW-like domain RPE_RS23370 PF01584 CheW-like domain RPE_RS23370 PF01627 Hpt domain RPE_RS23370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS23370 PF02895 Signal transducing histidine kinase, homodimeric domain RPE_RS23375 PF00072 Response regulator receiver domain RPE_RS23380 PF13466 STAS domain RPE_RS23385 PF00107 Zinc-binding dehydrogenase RPE_RS23385 PF08240 Alcohol dehydrogenase GroES-like domain RPE_RS23390 PF04828 Glutathione-dependent formaldehyde-activating enzyme RPE_RS23395 PF00756 Putative esterase RPE_RS23400 PF11684 RPE_RS23400 RPE_RS23405 PF13458 Periplasmic binding protein RPE_RS23410 PF10282 Lactonase, 7-bladed beta-propeller RPE_RS23415 PF00005 ABC transporter RPE_RS23420 PF01061 RPE_RS23420 RPE_RS23430 PF03724 META domain RPE_RS23435 PF00005 ABC transporter RPE_RS23435 PF06472 RPE_RS23435 RPE_RS23440 PF09694 RPE_RS23440 RPE_RS23450 PF02754 RPE_RS23450 RPE_RS23450 PF12838 4Fe-4S dicluster domain RPE_RS23455 PF01565 FAD binding domain RPE_RS23455 PF02913 FAD linked oxidases, C-terminal domain RPE_RS23460 PF01565 FAD binding domain RPE_RS23460 PF02913 FAD linked oxidases, C-terminal domain RPE_RS23465 PF00440 Bacterial regulatory proteins, tetR family RPE_RS23470 PF05437 RPE_RS23470 RPE_RS23475 PF03591 RPE_RS23475 RPE_RS23480 PF00004 ATPase family associated with various cellular activities (AAA) RPE_RS23480 PF01434 Peptidase family M41 RPE_RS23480 PF06480 FtsH Extracellular RPE_RS23485 PF01171 PP-loop family RPE_RS23490 PF13432 Tetratricopeptide repeat RPE_RS23495 PF00691 OmpA family RPE_RS23500 PF02311 AraC-like ligand binding domain RPE_RS23500 PF12833 Helix-turn-helix domain RPE_RS23505 PF13578 Methyltransferase domain RPE_RS23515 PF00563 EAL domain RPE_RS23515 PF00990 GGDEF domain RPE_RS23515 PF12860 RPE_RS23515 RPE_RS23520 PF04052 TolB amino-terminal domain RPE_RS23520 PF07676 WD40-like Beta Propeller Repeat RPE_RS23530 PF02472 Biopolymer transport protein ExbD/TolR RPE_RS23535 PF01618 RPE_RS23535 RPE_RS23540 PF10990 RPE_RS23540 RPE_RS23545 PF11014 RPE_RS23545 RPE_RS23550 PF00440 Bacterial regulatory proteins, tetR family RPE_RS23550 PF13305 WHG domain RPE_RS23555 PF03795 YCII-related domain RPE_RS23560 PF12680 SnoaL-like domain RPE_RS23565 PF13561 Enoyl-(Acyl carrier protein) reductase RPE_RS23570 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RPE_RS23575 PF00459 Inositol monophosphatase family RPE_RS23580 PF08238 Sel1 repeat RPE_RS23585 PF02581 Thiamine monophosphate synthase/TENI RPE_RS23590 PF00274 Fructose-bisphosphate aldolase class-I RPE_RS23595 PF02452 PemK-like protein RPE_RS23600 PF11455 RPE_RS23600 RPE_RS23605 PF00162 Phosphoglycerate kinase RPE_RS23610 PF10805 RPE_RS23610 RPE_RS23620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RPE_RS23620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RPE_RS23625 PF00456 Transketolase, thiamine diphosphate binding domain RPE_RS23625 PF02779 Transketolase, pyrimidine binding domain RPE_RS23625 PF02780 Transketolase, C-terminal domain RPE_RS23630 PF13747 RPE_RS23630 RPE_RS23635 PF05164 Cell division protein ZapA RPE_RS23640 PF10098 RPE_RS23640 RPE_RS23650 PF03795 YCII-related domain RPE_RS23655 PF04542 Sigma-70 region 2 RPE_RS23655 PF08281 Sigma-70, region 4 RPE_RS23660 PF06983 3-demethylubiquinone-9 3-methyltransferase RPE_RS23665 PF07690 Major Facilitator Superfamily RPE_RS23675 PF01136 RPE_RS23675 RPE_RS23680 PF01136 RPE_RS23680 RPE_RS23685 PF02036 SCP-2 sterol transfer family RPE_RS23690 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RPE_RS23695 PF02441 Flavoprotein RPE_RS23705 PF11188 RPE_RS23705 RPE_RS23710 PF13443 Cro/C1-type HTH DNA-binding domain RPE_RS23715 PF01523 Putative modulator of DNA gyrase RPE_RS23720 PF04255 Protein of unknown function (DUF433) RPE_RS23725 PF10011 Predicted membrane protein (DUF2254) RPE_RS23730 PF06776 Invasion associated locus B (IalB) protein RPE_RS23735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPE_RS23735 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RPE_RS23740 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPE_RS23745 PF01040 UbiA prenyltransferase family RPE_RS23755 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RPE_RS23760 PF00510 Cytochrome c oxidase subunit III RPE_RS23765 PF06170 RPE_RS23765 RPE_RS23770 PF02104 RPE_RS23770 RPE_RS23775 PF00291 Pyridoxal-phosphate dependent enzyme RPE_RS23775 PF14821 Threonine synthase N terminus RPE_RS23780 PF00675 Insulinase (Peptidase family M16) RPE_RS23780 PF05193 Peptidase M16 inactive domain RPE_RS23785 PF13302 Acetyltransferase (GNAT) domain RPE_RS23795 PF03061 Thioesterase superfamily RPE_RS23805 PF05016 Plasmid stabilisation system protein RPE_RS23815 PF09957 RPE_RS23815 RPE_RS23820 PF05491 Holliday junction DNA helicase ruvB C-terminus RPE_RS23820 PF05496 Holliday junction DNA helicase ruvB N-terminus RPE_RS23825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RPE_RS23830 PF01330 RuvA N terminal domain RPE_RS23830 PF07499 RuvA, C-terminal domain RPE_RS23830 PF14520 Helix-hairpin-helix domain RPE_RS23835 PF02075 Crossover junction endodeoxyribonuclease RuvC RPE_RS23840 PF01709 Transcriptional regulator RPE_RS23845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPE_RS23850 PF04055 Radical SAM superfamily RPE_RS23855 PF13277 YmdB-like protein RPE_RS23860 PF01812 5-formyltetrahydrofolate cyclo-ligase family RPE_RS23865 PF00430 ATP synthase B/B' CF(0) RPE_RS23870 PF00430 ATP synthase B/B' CF(0) RPE_RS23875 PF00137 ATP synthase subunit C RPE_RS23880 PF00119 ATP synthase A chain RPE_RS23885 PF09527 RPE_RS23885 RPE_RS23890 PF01323 DSBA-like thioredoxin domain RPE_RS23900 PF01894 Uncharacterised protein family UPF0047 RPE_RS23905 PF00083 Sugar (and other) transporter RPE_RS23910 PF00072 Response regulator receiver domain RPE_RS23910 PF00196 Bacterial regulatory proteins, luxR family RPE_RS23915 PF00072 Response regulator receiver domain RPE_RS23915 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS23915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS23915 PF12860 RPE_RS23915 RPE_RS23920 PF00155 Aminotransferase class I and II RPE_RS23925 PF00753 Metallo-beta-lactamase superfamily RPE_RS23930 PF13505 Outer membrane protein beta-barrel domain RPE_RS23940 PF00005 ABC transporter RPE_RS23945 PF00950 RPE_RS23945 RPE_RS23950 PF01297 Periplasmic solute binding protein family RPE_RS23955 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPE_RS23955 PF07683 Cobalamin synthesis protein cobW C-terminal domain RPE_RS23960 PF12894 Anaphase-promoting complex subunit 4 WD40 domain RPE_RS23980 PF03435 Saccharopine dehydrogenase RPE_RS23980 PF16653 RPE_RS23980 RPE_RS23985 PF01042 Endoribonuclease L-PSP RPE_RS23990 PF00583 Acetyltransferase (GNAT) family RPE_RS23995 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RPE_RS23995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RPE_RS24005 PF01432 Peptidase family M3 RPE_RS24010 PF06226 RPE_RS24010 RPE_RS24015 PF03824 RPE_RS24015 RPE_RS24020 PF00762 Ferrochelatase RPE_RS24025 PF01145 SPFH domain / Band 7 family RPE_RS24025 PF16200 RPE_RS24025 RPE_RS24030 PF01957 NfeD-like C-terminal, partner-binding RPE_RS24040 PF02132 RecR protein RPE_RS24040 PF13662 Toprim domain RPE_RS24045 PF02575 YbaB/EbfC DNA-binding family RPE_RS24050 PF12169 DNA polymerase III subunits gamma and tau domain III RPE_RS24050 PF12362 RPE_RS24050 RPE_RS24050 PF13177 DNA polymerase III, delta subunit RPE_RS24055 PF01230 HIT domain RPE_RS24060 PF00293 NUDIX domain RPE_RS24060 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RPE_RS24060 PF09297 NADH pyrophosphatase zinc ribbon domain RPE_RS24065 PF00294 pfkB family carbohydrate kinase RPE_RS24070 PF13975 RPE_RS24070 RPE_RS24075 PF00271 Helicase conserved C-terminal domain RPE_RS24075 PF04408 Helicase associated domain (HA2) RPE_RS24075 PF08482 RPE_RS24075 RPE_RS24080 PF01757 RPE_RS24080 RPE_RS24090 PF00476 DNA polymerase family A RPE_RS24090 PF01367 5'-3' exonuclease, C-terminal SAM fold RPE_RS24090 PF01612 3'-5' exonuclease RPE_RS24090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RPE_RS24095 PF00156 Phosphoribosyl transferase domain RPE_RS24100 PF11064 RPE_RS24100 RPE_RS24110 PF00343 Carbohydrate phosphorylase RPE_RS24115 PF13622 Thioesterase-like superfamily RPE_RS24120 PF04752 RPE_RS24120 RPE_RS24125 PF01553 Acyltransferase RPE_RS24130 PF02698 DUF218 domain RPE_RS24140 PF00005 ABC transporter RPE_RS24145 PF13717 RPE_RS24145 RPE_RS24150 PF00072 Response regulator receiver domain RPE_RS24165 PF00282 Pyridoxal-dependent decarboxylase conserved domain RPE_RS24170 PF13779 RPE_RS24170 RPE_RS24175 PF02627 Carboxymuconolactone decarboxylase family RPE_RS24180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RPE_RS24180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RPE_RS24190 PF00206 Lyase RPE_RS24190 PF14698 Argininosuccinate lyase C-terminal RPE_RS24195 PF08534 Redoxin RPE_RS24200 PF07237 Protein of unknown function (DUF1428) RPE_RS24215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPE_RS24215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPE_RS24220 PF00766 Electron transfer flavoprotein FAD-binding domain RPE_RS24220 PF01012 Electron transfer flavoprotein domain RPE_RS24225 PF01012 Electron transfer flavoprotein domain RPE_RS24230 PF01923 Cobalamin adenosyltransferase RPE_RS24235 PF04588 Hypoxia induced protein conserved region RPE_RS24240 PF03631 RPE_RS24240 RPE_RS24245 PF00072 Response regulator receiver domain RPE_RS24245 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS24245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS24250 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPE_RS24255 PF00730 HhH-GPD superfamily base excision DNA repair protein RPE_RS24270 PF13483 Beta-lactamase superfamily domain RPE_RS24290 PF00072 Response regulator receiver domain RPE_RS24295 PF00072 Response regulator receiver domain RPE_RS24295 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS24295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS24295 PF08448 PAS fold RPE_RS24305 PF05239 PRC-barrel domain RPE_RS24310 PF00128 Alpha amylase, catalytic domain RPE_RS24310 PF11941 Domain of unknown function (DUF3459) RPE_RS24320 PF11845 RPE_RS24320 RPE_RS24325 PF01909 Nucleotidyltransferase domain RPE_RS24335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPE_RS24340 PF01554 MatE RPE_RS24345 PF07995 Glucose / Sorbosone dehydrogenase RPE_RS24355 PF05685 Putative restriction endonuclease RPE_RS24360 PF05685 Putative restriction endonuclease RPE_RS24365 PF01909 Nucleotidyltransferase domain RPE_RS24370 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) RPE_RS24375 PF01053 Cys/Met metabolism PLP-dependent enzyme RPE_RS24380 PF13472 GDSL-like Lipase/Acylhydrolase family RPE_RS24385 PF13472 GDSL-like Lipase/Acylhydrolase family RPE_RS24390 PF10129 RPE_RS24390 RPE_RS24395 PF04379 Protein of unknown function (DUF525) RPE_RS24400 PF01430 Hsp33 protein RPE_RS24405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPE_RS24405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPE_RS24410 PF00202 Aminotransferase class-III RPE_RS24415 PF07750 RPE_RS24415 RPE_RS24420 PF00072 Response regulator receiver domain RPE_RS24420 PF00486 Transcriptional regulatory protein, C terminal RPE_RS24425 PF01895 PhoU domain RPE_RS24430 PF00005 ABC transporter RPE_RS24435 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS24440 PF00528 Binding-protein-dependent transport system inner membrane component RPE_RS24445 PF12849 PBP superfamily domain RPE_RS24450 PF00512 His Kinase A (phospho-acceptor) domain RPE_RS24450 PF00989 PAS fold RPE_RS24450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS24455 PF03706 RPE_RS24455 RPE_RS24465 PF00691 OmpA family RPE_RS24470 PF01522 Polysaccharide deacetylase RPE_RS24475 PF00183 Hsp90 protein RPE_RS24475 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS24480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS24485 PF00072 Response regulator receiver domain RPE_RS24485 PF00486 Transcriptional regulatory protein, C terminal RPE_RS24490 PF03413 Peptidase propeptide and YPEB domain RPE_RS24495 PF01292 Prokaryotic cytochrome b561 RPE_RS24505 PF13670 RPE_RS24505 RPE_RS24520 PF01008 Initiation factor 2 subunit family RPE_RS24525 PF01048 Phosphorylase superfamily RPE_RS24530 PF00465 Iron-containing alcohol dehydrogenase RPE_RS24540 PF16868 RPE_RS24540 RPE_RS24545 PF00501 AMP-binding enzyme RPE_RS24545 PF13193 AMP-binding enzyme C-terminal domain RPE_RS24550 PF00270 DEAD/DEAH box helicase RPE_RS24550 PF00271 Helicase conserved C-terminal domain RPE_RS24550 PF00570 HRDC domain RPE_RS24550 PF09382 RQC domain RPE_RS24550 PF16124 RPE_RS24550 RPE_RS24555 PF09723 RPE_RS24555 RPE_RS24560 PF12071 RPE_RS24560 RPE_RS24565 PF01966 HD domain RPE_RS24575 PF02563 Polysaccharide biosynthesis/export protein RPE_RS24575 PF10531 SLBB domain RPE_RS24580 PF01625 Peptide methionine sulfoxide reductase RPE_RS24590 PF01649 Ribosomal protein S20 RPE_RS24615 PF08843 Nucleotidyl transferase of unknown function (DUF1814) RPE_RS24620 PF00691 OmpA family RPE_RS24625 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RPE_RS24630 PF00563 EAL domain RPE_RS24630 PF00990 GGDEF domain RPE_RS24635 PF13683 RPE_RS24635 RPE_RS24640 PF05050 Methyltransferase FkbM domain RPE_RS24645 PF01757 RPE_RS24645 RPE_RS24665 PF08447 PAS fold RPE_RS24665 PF12833 Helix-turn-helix domain RPE_RS24675 PF10983 RPE_RS24675 RPE_RS24690 PF00563 EAL domain RPE_RS24690 PF00672 HAMP domain RPE_RS24690 PF00990 GGDEF domain RPE_RS24690 PF02743 Cache domain RPE_RS24690 PF12860 RPE_RS24690 RPE_RS24695 PF00656 Caspase domain RPE_RS24715 PF07660 Secretin and TonB N terminus short domain RPE_RS24725 PF01478 Type IV leader peptidase family RPE_RS24730 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RPE_RS24730 PF13181 Tetratricopeptide repeat RPE_RS24730 PF13432 Tetratricopeptide repeat RPE_RS24735 PF00561 alpha/beta hydrolase fold RPE_RS24750 PF03544 Gram-negative bacterial TonB protein C-terminal RPE_RS24760 PF08447 PAS fold RPE_RS24765 PF00990 GGDEF domain RPE_RS24785 PF00072 Response regulator receiver domain RPE_RS24785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPE_RS24785 PF08447 PAS fold RPE_RS24785 PF13426 PAS domain RPE_RS24795 PF00535 Glycosyl transferase family 2 RPE_RS24795 PF13578 Methyltransferase domain RPE_RS24800 PF07883 Cupin domain RPE_RS24800 PF12833 Helix-turn-helix domain RPE_RS24805 PF00082 Subtilase family RPE_RS24805 PF13365 Trypsin-like peptidase domain RPE_RS24810 PF00563 EAL domain RPE_RS24810 PF00990 GGDEF domain RPE_RS24810 PF08448 PAS fold RPE_RS24810 PF12860 RPE_RS24810 RPE_RS24810 PF13426 PAS domain RPE_RS24815 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235)