RPE_RS00005 SM00382 ATPases associated with a variety of cellular activities RPE_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain RPE_RS00010 SM00480 DNA polymerase III beta subunit RPE_RS00025 SM00387 Histidine kinase-like ATPases RPE_RS00025 SM00433 TopoisomeraseII RPE_RS00030 SM00911 HWE histidine kinase RPE_RS00040 SM00344 helix_turn_helix ASNC type RPE_RS00125 SM00798 AICARFT/IMPCHase bienzyme RPE_RS00125 SM00851 MGS-like domain RPE_RS00145 SM00953 RPE_RS00145 RPE_RS00155 SM00318 Staphylococcal nuclease homologues RPE_RS00160 SM00098 Alkaline phosphatase homologues RPE_RS00170 SM00014 Acid phosphatase homologues RPE_RS00180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RPE_RS00195 SM00829 Enoylreductase RPE_RS00220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS00220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS00230 SM01152 RPE_RS00230 RPE_RS00275 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RPE_RS00420 SM00318 Staphylococcal nuclease homologues RPE_RS00425 SM00460 Transglutaminase/protease-like homologues RPE_RS00435 SM00460 Transglutaminase/protease-like homologues RPE_RS00445 SM00052 Putative diguanylate phosphodiesterase RPE_RS00445 SM00091 PAS domain RPE_RS00445 SM00267 diguanylate cyclase RPE_RS00460 SM01091 Transporter associated domain RPE_RS00500 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen RPE_RS00530 SM00382 ATPases associated with a variety of cellular activities RPE_RS00565 SM00829 Enoylreductase RPE_RS00575 SM00028 Tetratricopeptide repeats RPE_RS00590 SM00822 RPE_RS00590 RPE_RS00620 SM01058 CarD-like/TRCF domain RPE_RS00635 SM00363 S4 RNA-binding domain RPE_RS00640 SM00490 helicase superfamily c-terminal domain RPE_RS00655 SM00091 PAS domain RPE_RS00655 SM00387 Histidine kinase-like ATPases RPE_RS00655 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS00655 SM00448 cheY-homologous receiver domain RPE_RS00665 SM00327 von Willebrand factor (vWF) type A domain RPE_RS00680 SM00382 ATPases associated with a variety of cellular activities RPE_RS00690 SM00271 DnaJ molecular chaperone homology domain RPE_RS00730 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS00730 SM01091 Transporter associated domain RPE_RS00735 SM00957 SecA DEAD-like domain RPE_RS00735 SM00958 SecA preprotein cross-linking domain RPE_RS00800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RPE_RS00805 SM00937 RPE_RS00805 RPE_RS00825 SM00849 Metallo-beta-lactamase superfamily RPE_RS00840 SM00822 RPE_RS00840 RPE_RS00860 SM00052 Putative diguanylate phosphodiesterase RPE_RS00860 SM00267 diguanylate cyclase RPE_RS00900 SM01034 Sensors of blue-light using FAD RPE_RS00905 SM00052 Putative diguanylate phosphodiesterase RPE_RS00905 SM00267 diguanylate cyclase RPE_RS00950 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS00970 SM00316 Ribosomal protein S1-like RNA-binding domain RPE_RS00970 SM00322 K homology RNA-binding domain RPE_RS00975 SM01387 RPE_RS00975 RPE_RS01000 SM00316 Ribosomal protein S1-like RNA-binding domain RPE_RS01000 SM00322 K homology RNA-binding domain RPE_RS01015 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS01025 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS01025 SM01091 Transporter associated domain RPE_RS01040 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS01065 SM00932 Scaffold protein Nfu/NifU N terminal RPE_RS01070 SM00382 ATPases associated with a variety of cellular activities RPE_RS01150 SM00382 ATPases associated with a variety of cellular activities RPE_RS01155 SM00387 Histidine kinase-like ATPases RPE_RS01155 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS01160 SM00448 cheY-homologous receiver domain RPE_RS01170 SM00327 von Willebrand factor (vWF) type A domain RPE_RS01175 SM00849 Metallo-beta-lactamase superfamily RPE_RS01185 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS01185 SM00091 PAS domain RPE_RS01185 SM00387 Histidine kinase-like ATPases RPE_RS01185 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS01185 SM00448 cheY-homologous receiver domain RPE_RS01215 SM00091 PAS domain RPE_RS01240 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RPE_RS01240 SM00534 ATPase domain of DNA mismatch repair MUTS family RPE_RS01290 SM00825 Beta-ketoacyl synthase RPE_RS01310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RPE_RS01315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS01315 SM00387 Histidine kinase-like ATPases RPE_RS01315 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS01315 SM00448 cheY-homologous receiver domain RPE_RS01365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RPE_RS01365 SM00245 tail specific protease RPE_RS01395 SM01004 Delta-aminolevulinic acid dehydratase RPE_RS01400 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS01410 SM00382 ATPases associated with a variety of cellular activities RPE_RS01435 SM00487 DEAD-like helicases superfamily RPE_RS01435 SM00490 helicase superfamily c-terminal domain RPE_RS01465 SM00822 RPE_RS01465 RPE_RS01490 SM00861 Transketolase, pyrimidine binding domain RPE_RS01495 SM00881 CoA binding domain RPE_RS01525 SM00382 ATPases associated with a variety of cellular activities RPE_RS01560 SM00382 ATPases associated with a variety of cellular activities RPE_RS01595 SM00382 ATPases associated with a variety of cellular activities RPE_RS01595 SM00962 SRP54-type protein, GTPase domain RPE_RS01595 SM00963 SRP54-type protein, helical bundle domain RPE_RS01605 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS01615 SM00871 Bacterial transcription activator, effector binding domain RPE_RS01640 SM00382 ATPases associated with a variety of cellular activities RPE_RS01640 SM00962 SRP54-type protein, GTPase domain RPE_RS01640 SM00963 SRP54-type protein, helical bundle domain RPE_RS01710 SM00947 Carbonic anhydrase RPE_RS01715 SM00855 Phosphoglycerate mutase family RPE_RS01730 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RPE_RS01740 SM00650 Ribosomal RNA adenine dimethylases RPE_RS01745 SM00271 DnaJ molecular chaperone homology domain RPE_RS01780 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS01805 SM00382 ATPases associated with a variety of cellular activities RPE_RS01815 SM00091 PAS domain RPE_RS01815 SM00387 Histidine kinase-like ATPases RPE_RS01815 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS01815 SM00448 cheY-homologous receiver domain RPE_RS01865 SM00382 ATPases associated with a variety of cellular activities RPE_RS01865 SM01086 C-terminal, D2-small domain, of ClpB protein RPE_RS01870 SM00463 Small MutS-related domain RPE_RS01875 SM00925 MltA specific insert domain RPE_RS01880 SM00978 RPE_RS01880 RPE_RS01890 SM00479 RPE_RS01890 RPE_RS01915 SM00357 Cold shock protein domain RPE_RS01915 SM00382 ATPases associated with a variety of cellular activities RPE_RS01915 SM00959 Rho termination factor, N-terminal domain RPE_RS01925 SM01228 RPE_RS01925 RPE_RS01940 SM00470 ParB-like nuclease domain RPE_RS01960 SM00267 diguanylate cyclase RPE_RS01960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS01975 SM00448 cheY-homologous receiver domain RPE_RS01975 SM00862 Transcriptional regulatory protein, C terminal RPE_RS01980 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS01995 SM00382 ATPases associated with a variety of cellular activities RPE_RS01995 SM00843 RPE_RS01995 RPE_RS02020 SM00938 Nitrogen regulatory protein P-II RPE_RS02030 SM00938 Nitrogen regulatory protein P-II RPE_RS02050 SM00464 Found in ATP-dependent protease La (LON) RPE_RS02065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS02085 SM00316 Ribosomal protein S1-like RNA-binding domain RPE_RS02085 SM00732 Likely ribonuclease with RNase H fold. RPE_RS02135 SM00382 ATPases associated with a variety of cellular activities RPE_RS02140 SM00474 3'-5' exonuclease RPE_RS02155 SM00382 ATPases associated with a variety of cellular activities RPE_RS02190 SM00382 ATPases associated with a variety of cellular activities RPE_RS02255 SM00316 Ribosomal protein S1-like RNA-binding domain RPE_RS02265 SM00411 bacterial (prokaryotic) histone like domain RPE_RS02335 SM00091 PAS domain RPE_RS02335 SM00387 Histidine kinase-like ATPases RPE_RS02335 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS02365 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RPE_RS02365 SM01232 RPE_RS02365 RPE_RS02380 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS02385 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. RPE_RS02405 SM01329 RPE_RS02405 RPE_RS02410 SM01321 RPE_RS02410 RPE_RS02425 SM00859 Semialdehyde dehydrogenase, NAD binding domain RPE_RS02435 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS02445 SM00478 endonuclease III RPE_RS02445 SM00525 RPE_RS02445 RPE_RS02470 SM00873 B3/4 domain RPE_RS02470 SM00874 tRNA synthetase B5 domain RPE_RS02470 SM00896 Ferredoxin-fold anticodon binding domain RPE_RS02555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS02620 SM00382 ATPases associated with a variety of cellular activities RPE_RS02655 SM00382 ATPases associated with a variety of cellular activities RPE_RS02690 SM00062 Bacterial periplasmic substrate-binding proteins RPE_RS02715 SM00448 cheY-homologous receiver domain RPE_RS02715 SM00862 Transcriptional regulatory protein, C terminal RPE_RS02720 SM00387 Histidine kinase-like ATPases RPE_RS02720 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS02725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS02725 SM00387 Histidine kinase-like ATPases RPE_RS02755 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RPE_RS02810 SM00487 DEAD-like helicases superfamily RPE_RS02810 SM00490 helicase superfamily c-terminal domain RPE_RS02930 SM00829 Enoylreductase RPE_RS02935 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS02935 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS02940 SM01092 CO dehydrogenase flavoprotein C-terminal domain RPE_RS02945 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS02970 SM00382 ATPases associated with a variety of cellular activities RPE_RS02975 SM00382 ATPases associated with a variety of cellular activities RPE_RS03040 SM00829 Enoylreductase RPE_RS03045 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS03050 SM00822 RPE_RS03050 RPE_RS03085 SM00327 von Willebrand factor (vWF) type A domain RPE_RS03145 SM00421 helix_turn_helix, Lux Regulon RPE_RS03145 SM00448 cheY-homologous receiver domain RPE_RS03150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RPE_RS03150 SM00387 Histidine kinase-like ATPases RPE_RS03150 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS03155 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RPE_RS03155 SM00387 Histidine kinase-like ATPases RPE_RS03155 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS03160 SM00448 cheY-homologous receiver domain RPE_RS03165 SM00387 Histidine kinase-like ATPases RPE_RS03165 SM00448 cheY-homologous receiver domain RPE_RS03170 SM00878 Biotin carboxylase C-terminal domain RPE_RS03175 SM01240 RPE_RS03175 RPE_RS03185 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS03210 SM00387 Histidine kinase-like ATPases RPE_RS03250 SM00465 GIY-YIG type nucleases (URI domain) RPE_RS03320 SM00382 ATPases associated with a variety of cellular activities RPE_RS03340 SM00829 Enoylreductase RPE_RS03345 SM00052 Putative diguanylate phosphodiesterase RPE_RS03345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS03345 SM00091 PAS domain RPE_RS03345 SM00267 diguanylate cyclase RPE_RS03380 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS03440 SM00267 diguanylate cyclase RPE_RS03475 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS03535 SM00448 cheY-homologous receiver domain RPE_RS03575 SM00671 Sel1-like repeats. RPE_RS03590 SM01057 Eukaryotic-type carbonic anhydrase RPE_RS03610 SM00849 Metallo-beta-lactamase superfamily RPE_RS03655 SM00487 DEAD-like helicases superfamily RPE_RS03655 SM00490 helicase superfamily c-terminal domain RPE_RS03690 SM00062 Bacterial periplasmic substrate-binding proteins RPE_RS03690 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RPE_RS03815 SM00382 ATPases associated with a variety of cellular activities RPE_RS04020 SM00507 HNH nucleases RPE_RS04035 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS04110 SM00363 S4 RNA-binding domain RPE_RS04130 SM00448 cheY-homologous receiver domain RPE_RS04130 SM00862 Transcriptional regulatory protein, C terminal RPE_RS04135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS04135 SM00387 Histidine kinase-like ATPases RPE_RS04135 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS04160 SM00838 Elongation factor G C-terminus RPE_RS04200 SM00487 DEAD-like helicases superfamily RPE_RS04200 SM00490 helicase superfamily c-terminal domain RPE_RS04240 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS04280 SM00849 Metallo-beta-lactamase superfamily RPE_RS04285 SM00564 beta-propeller repeat RPE_RS04295 SM00062 Bacterial periplasmic substrate-binding proteins RPE_RS04335 SM00883 Chaperonin 10 Kd subunit RPE_RS04455 SM00062 Bacterial periplasmic substrate-binding proteins RPE_RS04495 SM00052 Putative diguanylate phosphodiesterase RPE_RS04495 SM00267 diguanylate cyclase RPE_RS04525 SM00318 Staphylococcal nuclease homologues RPE_RS04575 SM00028 Tetratricopeptide repeats RPE_RS04590 SM00849 Metallo-beta-lactamase superfamily RPE_RS04615 SM00052 Putative diguanylate phosphodiesterase RPE_RS04635 SM00448 cheY-homologous receiver domain RPE_RS04645 SM00357 Cold shock protein domain RPE_RS04655 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RPE_RS04655 SM00465 GIY-YIG type nucleases (URI domain) RPE_RS04685 SM00363 S4 RNA-binding domain RPE_RS04825 SM00869 Autotransporter beta-domain RPE_RS04875 SM00382 ATPases associated with a variety of cellular activities RPE_RS04875 SM00448 cheY-homologous receiver domain RPE_RS04900 SM00460 Transglutaminase/protease-like homologues RPE_RS04925 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RPE_RS05040 SM00382 ATPases associated with a variety of cellular activities RPE_RS05045 SM00382 ATPases associated with a variety of cellular activities RPE_RS05055 SM00421 helix_turn_helix, Lux Regulon RPE_RS05055 SM00448 cheY-homologous receiver domain RPE_RS05070 SM00382 ATPases associated with a variety of cellular activities RPE_RS05335 SM00400 zinc finger RPE_RS05335 SM00493 RPE_RS05335 RPE_RS05375 SM00363 S4 RNA-binding domain RPE_RS05390 SM00861 Transketolase, pyrimidine binding domain RPE_RS05450 SM00857 Resolvase, N terminal domain RPE_RS05480 SM00230 Calpain-like thiol protease family. RPE_RS05485 SM00382 ATPases associated with a variety of cellular activities RPE_RS05510 SM00382 ATPases associated with a variety of cellular activities RPE_RS05530 SM00028 Tetratricopeptide repeats RPE_RS05650 SM00984 UDP binding domain RPE_RS05665 SM00421 helix_turn_helix, Lux Regulon RPE_RS05690 SM00382 ATPases associated with a variety of cellular activities RPE_RS05810 SM00382 ATPases associated with a variety of cellular activities RPE_RS06005 SM00862 Transcriptional regulatory protein, C terminal RPE_RS06040 SM00448 cheY-homologous receiver domain RPE_RS06045 SM00073 Histidine Phosphotransfer domain RPE_RS06045 SM00260 Two component signalling adaptor domain RPE_RS06045 SM00387 Histidine kinase-like ATPases RPE_RS06045 SM01231 RPE_RS06045 RPE_RS06050 SM00260 Two component signalling adaptor domain RPE_RS06055 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS06055 SM00091 PAS domain RPE_RS06055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS06060 SM00138 Methyltransferase, chemotaxis proteins RPE_RS06070 SM00448 cheY-homologous receiver domain RPE_RS06075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS06090 SM00331 Sigma factor PP2C-like phosphatases RPE_RS06090 SM00448 cheY-homologous receiver domain RPE_RS06095 SM00073 Histidine Phosphotransfer domain RPE_RS06100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS06100 SM00387 Histidine kinase-like ATPases RPE_RS06100 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS06100 SM00448 cheY-homologous receiver domain RPE_RS06110 SM00450 Rhodanese Homology Domain RPE_RS06135 SM00382 ATPases associated with a variety of cellular activities RPE_RS06160 SM00382 ATPases associated with a variety of cellular activities RPE_RS06175 SM00796 Allophanate hydrolase subunit 1 RPE_RS06175 SM00797 Allophanate hydrolase subunit 2 RPE_RS06175 SM00878 Biotin carboxylase C-terminal domain RPE_RS06310 SM00382 ATPases associated with a variety of cellular activities RPE_RS06310 SM00448 cheY-homologous receiver domain RPE_RS06315 SM00091 PAS domain RPE_RS06315 SM00387 Histidine kinase-like ATPases RPE_RS06315 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS06340 SM00344 helix_turn_helix ASNC type RPE_RS06345 SM00450 Rhodanese Homology Domain RPE_RS06360 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RPE_RS06385 SM00382 ATPases associated with a variety of cellular activities RPE_RS06405 SM01012 RPE_RS06405 RPE_RS06430 SM00642 Alpha-amylase domain RPE_RS06435 SM00642 Alpha-amylase domain RPE_RS06440 SM00448 cheY-homologous receiver domain RPE_RS06475 SM00421 helix_turn_helix, Lux Regulon RPE_RS06515 SM00421 helix_turn_helix, Lux Regulon RPE_RS06590 SM00382 ATPases associated with a variety of cellular activities RPE_RS06595 SM00327 von Willebrand factor (vWF) type A domain RPE_RS06605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS06605 SM00091 PAS domain RPE_RS06605 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS06610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS06610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS06610 SM01049 RPE_RS06610 RPE_RS06620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS06620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS06620 SM01049 RPE_RS06620 RPE_RS06725 SM00091 PAS domain RPE_RS06760 SM00091 PAS domain RPE_RS06765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RPE_RS06860 SM00961 Ribulose bisphosphate carboxylase, small chain RPE_RS06865 SM00382 ATPases associated with a variety of cellular activities RPE_RS06900 SM00387 Histidine kinase-like ATPases RPE_RS06900 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS06900 SM00448 cheY-homologous receiver domain RPE_RS06930 SM00903 Flavin reductase like domain RPE_RS06935 SM00420 helix_turn_helix, Deoxyribose operon repressor RPE_RS06935 SM01134 RPE_RS06935 RPE_RS06945 SM00382 ATPases associated with a variety of cellular activities RPE_RS06950 SM00382 ATPases associated with a variety of cellular activities RPE_RS06990 SM00382 ATPases associated with a variety of cellular activities RPE_RS06995 SM00382 ATPases associated with a variety of cellular activities RPE_RS07020 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS07100 SM00904 Riboflavin kinase RPE_RS07105 SM01266 RPE_RS07105 RPE_RS07110 SM00953 RPE_RS07110 RPE_RS07150 SM00853 MutL C terminal dimerisation domain RPE_RS07150 SM01340 RPE_RS07150 RPE_RS07170 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS07175 SM00448 cheY-homologous receiver domain RPE_RS07175 SM00862 Transcriptional regulatory protein, C terminal RPE_RS07180 SM00387 Histidine kinase-like ATPases RPE_RS07180 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS07200 SM01400 RPE_RS07200 RPE_RS07280 SM00382 ATPases associated with a variety of cellular activities RPE_RS07345 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS07400 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RPE_RS07410 SM00382 ATPases associated with a variety of cellular activities RPE_RS07455 SM00387 Histidine kinase-like ATPases RPE_RS07455 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS07460 SM00052 Putative diguanylate phosphodiesterase RPE_RS07460 SM00267 diguanylate cyclase RPE_RS07460 SM01079 RPE_RS07460 RPE_RS07470 SM00267 diguanylate cyclase RPE_RS07475 SM01018 B12 binding domain RPE_RS07535 SM00855 Phosphoglycerate mutase family RPE_RS07605 SM00984 UDP binding domain RPE_RS07630 SM00861 Transketolase, pyrimidine binding domain RPE_RS07660 SM00028 Tetratricopeptide repeats RPE_RS07715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS07715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS07725 SM00858 RPE_RS07725 RPE_RS07770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS07770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS07770 SM01049 RPE_RS07770 RPE_RS07780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS07780 SM00387 Histidine kinase-like ATPases RPE_RS07780 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS07780 SM00448 cheY-homologous receiver domain RPE_RS07830 SM00091 PAS domain RPE_RS07830 SM00387 Histidine kinase-like ATPases RPE_RS07830 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS07830 SM00448 cheY-homologous receiver domain RPE_RS07835 SM00901 RPE_RS07835 RPE_RS07845 SM00978 RPE_RS07845 RPE_RS07930 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain RPE_RS07940 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS08015 SM00382 ATPases associated with a variety of cellular activities RPE_RS08035 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RPE_RS08060 SM01329 RPE_RS08060 RPE_RS08105 SM01211 RPE_RS08105 RPE_RS08160 SM00506 Appr-1"-p processing enzyme RPE_RS08195 SM00387 Histidine kinase-like ATPases RPE_RS08215 SM00363 S4 RNA-binding domain RPE_RS08215 SM01390 RPE_RS08215 RPE_RS08260 SM00998 Adenylosuccinate lyase C-terminus RPE_RS08280 SM00054 EF-hand, calcium binding motif RPE_RS08305 SM00382 ATPases associated with a variety of cellular activities RPE_RS08310 SM00382 ATPases associated with a variety of cellular activities RPE_RS08345 SM01092 CO dehydrogenase flavoprotein C-terminal domain RPE_RS08350 SM00382 ATPases associated with a variety of cellular activities RPE_RS08370 SM00852 Probable molybdopterin binding domain RPE_RS08400 SM00382 ATPases associated with a variety of cellular activities RPE_RS08535 SM00382 ATPases associated with a variety of cellular activities RPE_RS08540 SM00382 ATPases associated with a variety of cellular activities RPE_RS08565 SM00822 RPE_RS08565 RPE_RS08600 SM00382 ATPases associated with a variety of cellular activities RPE_RS08625 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPE_RS08630 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RPE_RS08630 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPE_RS08675 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS08675 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS08680 SM00448 cheY-homologous receiver domain RPE_RS08685 SM00421 helix_turn_helix, Lux Regulon RPE_RS08685 SM00448 cheY-homologous receiver domain RPE_RS08690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS08690 SM00091 PAS domain RPE_RS08690 SM00387 Histidine kinase-like ATPases RPE_RS08690 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS08695 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS08720 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS08725 SM00881 CoA binding domain RPE_RS08745 SM00382 ATPases associated with a variety of cellular activities RPE_RS08760 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS08760 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS08765 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS08790 SM00911 HWE histidine kinase RPE_RS08790 SM01079 RPE_RS08790 RPE_RS08805 SM00448 cheY-homologous receiver domain RPE_RS08905 SM00382 ATPases associated with a variety of cellular activities RPE_RS08945 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS08995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS08995 SM00387 Histidine kinase-like ATPases RPE_RS08995 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS08995 SM00448 cheY-homologous receiver domain RPE_RS09010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RPE_RS09030 SM00822 RPE_RS09030 RPE_RS09080 SM01049 RPE_RS09080 RPE_RS09085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS09085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS09095 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS09185 SM00986 Uracil DNA glycosylase superfamily RPE_RS09185 SM00987 UreE urease accessory protein, C-terminal domain RPE_RS09190 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS09205 SM00481 DNA polymerase alpha chain like domain RPE_RS09235 SM00052 Putative diguanylate phosphodiesterase RPE_RS09235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS09235 SM00267 diguanylate cyclase RPE_RS09260 SM00267 diguanylate cyclase RPE_RS09280 SM00710 Parallel beta-helix repeats RPE_RS09345 SM00905 Dihydroneopterin aldolase RPE_RS09375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS09375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS09375 SM01358 RPE_RS09375 RPE_RS09380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS09420 SM00091 PAS domain RPE_RS09420 SM00387 Histidine kinase-like ATPases RPE_RS09420 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS09480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS09485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS09485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS09490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS09490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS09490 SM01049 RPE_RS09490 RPE_RS09500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS09500 SM00091 PAS domain RPE_RS09500 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS09505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS09525 SM00465 GIY-YIG type nucleases (URI domain) RPE_RS09610 SM00020 Trypsin-like serine protease RPE_RS09685 SM00448 cheY-homologous receiver domain RPE_RS09685 SM00862 Transcriptional regulatory protein, C terminal RPE_RS09690 SM00387 Histidine kinase-like ATPases RPE_RS09725 SM00833 Cobalamin synthesis protein cobW C-terminal domain RPE_RS09740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RPE_RS09745 SM00448 cheY-homologous receiver domain RPE_RS09745 SM00862 Transcriptional regulatory protein, C terminal RPE_RS09750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS09750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS09755 SM00267 diguanylate cyclase RPE_RS09755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS09760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS09760 SM00387 Histidine kinase-like ATPases RPE_RS09760 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS09800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS09800 SM00387 Histidine kinase-like ATPases RPE_RS09800 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS09840 SM00345 helix_turn_helix gluconate operon transcriptional repressor RPE_RS09840 SM00895 RPE_RS09840 RPE_RS09865 SM00448 cheY-homologous receiver domain RPE_RS09865 SM00862 Transcriptional regulatory protein, C terminal RPE_RS09870 SM00387 Histidine kinase-like ATPases RPE_RS09880 SM00411 bacterial (prokaryotic) histone like domain RPE_RS09930 SM00387 Histidine kinase-like ATPases RPE_RS09930 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS09960 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS10015 SM00966 SpoVT / AbrB like domain RPE_RS10045 SM00917 LeuA allosteric (dimerisation) domain RPE_RS10070 SM00382 ATPases associated with a variety of cellular activities RPE_RS10100 SM00450 Rhodanese Homology Domain RPE_RS10125 SM00829 Enoylreductase RPE_RS10130 SM00825 Beta-ketoacyl synthase RPE_RS10185 SM00382 ATPases associated with a variety of cellular activities RPE_RS10190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS10190 SM00091 PAS domain RPE_RS10190 SM00267 diguanylate cyclase RPE_RS10200 SM00450 Rhodanese Homology Domain RPE_RS10205 SM00450 Rhodanese Homology Domain RPE_RS10225 SM00382 ATPases associated with a variety of cellular activities RPE_RS10235 SM00966 SpoVT / AbrB like domain RPE_RS10280 SM00382 ATPases associated with a variety of cellular activities RPE_RS10315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS10345 SM00267 diguanylate cyclase RPE_RS10370 SM01321 RPE_RS10370 RPE_RS10455 SM00829 Enoylreductase RPE_RS10460 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS10525 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS10530 SM00644 RPE_RS10530 RPE_RS10585 SM00465 GIY-YIG type nucleases (URI domain) RPE_RS10615 SM00842 Cell division protein FtsA RPE_RS10620 SM00864 Tubulin/FtsZ family, GTPase domain RPE_RS10620 SM00865 Tubulin/FtsZ family, C-terminal domain RPE_RS10640 SM00465 GIY-YIG type nucleases (URI domain) RPE_RS10645 SM00292 breast cancer carboxy-terminal domain RPE_RS10645 SM00532 Ligase N family RPE_RS10700 SM00382 ATPases associated with a variety of cellular activities RPE_RS10865 SM00487 DEAD-like helicases superfamily RPE_RS10865 SM00490 helicase superfamily c-terminal domain RPE_RS10890 SM00382 ATPases associated with a variety of cellular activities RPE_RS10925 SM00244 prohibitin homologues RPE_RS10930 SM00244 prohibitin homologues RPE_RS10940 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RPE_RS10990 SM00966 SpoVT / AbrB like domain RPE_RS11015 SM00822 RPE_RS11015 RPE_RS11040 SM00382 ATPases associated with a variety of cellular activities RPE_RS11065 SM00966 SpoVT / AbrB like domain RPE_RS11070 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS11070 SM00876 Biotin and Thiamin Synthesis associated domain RPE_RS11075 SM00917 LeuA allosteric (dimerisation) domain RPE_RS11215 SM00833 Cobalamin synthesis protein cobW C-terminal domain RPE_RS11270 SM00387 Histidine kinase-like ATPases RPE_RS11270 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS11270 SM00448 cheY-homologous receiver domain RPE_RS11295 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS11315 SM00878 Biotin carboxylase C-terminal domain RPE_RS11390 SM00822 RPE_RS11390 RPE_RS11395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RPE_RS11405 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RPE_RS11420 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS11445 SM00465 GIY-YIG type nucleases (URI domain) RPE_RS11460 SM00883 Chaperonin 10 Kd subunit RPE_RS11485 SM00387 Histidine kinase-like ATPases RPE_RS11485 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS11485 SM00448 cheY-homologous receiver domain RPE_RS11520 SM00460 Transglutaminase/protease-like homologues RPE_RS11535 SM00852 Probable molybdopterin binding domain RPE_RS11565 SM00829 Enoylreductase RPE_RS11610 SM00971 Serine acetyltransferase, N-terminal RPE_RS11645 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS11660 SM00421 helix_turn_helix, Lux Regulon RPE_RS11675 SM00091 PAS domain RPE_RS11675 SM00387 Histidine kinase-like ATPases RPE_RS11675 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS11675 SM00448 cheY-homologous receiver domain RPE_RS11680 SM00448 cheY-homologous receiver domain RPE_RS11685 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS11700 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS11715 SM00052 Putative diguanylate phosphodiesterase RPE_RS11715 SM00091 PAS domain RPE_RS11715 SM00267 diguanylate cyclase RPE_RS11730 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RPE_RS11760 SM01234 RPE_RS11760 RPE_RS11795 SM01117 RPE_RS11795 RPE_RS11830 SM00448 cheY-homologous receiver domain RPE_RS11835 SM00267 diguanylate cyclase RPE_RS11835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS11845 SM00028 Tetratricopeptide repeats RPE_RS11860 SM00357 Cold shock protein domain RPE_RS11925 SM00881 CoA binding domain RPE_RS11940 SM00346 helix_turn_helix isocitrate lyase regulation RPE_RS11995 SM00822 RPE_RS11995 RPE_RS12005 SM00382 ATPases associated with a variety of cellular activities RPE_RS12015 SM00869 Autotransporter beta-domain RPE_RS12090 SM00671 Sel1-like repeats. RPE_RS12115 SM00387 Histidine kinase-like ATPases RPE_RS12115 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS12280 SM00487 DEAD-like helicases superfamily RPE_RS12280 SM00490 helicase superfamily c-terminal domain RPE_RS12295 SM00052 Putative diguanylate phosphodiesterase RPE_RS12295 SM00267 diguanylate cyclase RPE_RS12305 SM01034 Sensors of blue-light using FAD RPE_RS12325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS12325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS12325 SM01049 RPE_RS12325 RPE_RS12330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS12330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS12335 SM00052 Putative diguanylate phosphodiesterase RPE_RS12335 SM00267 diguanylate cyclase RPE_RS12380 SM00382 ATPases associated with a variety of cellular activities RPE_RS12390 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS12400 SM00479 RPE_RS12400 RPE_RS12455 SM00382 ATPases associated with a variety of cellular activities RPE_RS12465 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS12535 SM00487 DEAD-like helicases superfamily RPE_RS12535 SM00490 helicase superfamily c-terminal domain RPE_RS12560 SM01230 RPE_RS12560 RPE_RS12565 SM00938 Nitrogen regulatory protein P-II RPE_RS12595 SM00382 ATPases associated with a variety of cellular activities RPE_RS12595 SM00994 ClpX C4-type zinc finger RPE_RS12595 SM01086 C-terminal, D2-small domain, of ClpB protein RPE_RS12600 SM00382 ATPases associated with a variety of cellular activities RPE_RS12600 SM00464 Found in ATP-dependent protease La (LON) RPE_RS12630 SM00411 bacterial (prokaryotic) histone like domain RPE_RS12640 SM00028 Tetratricopeptide repeats RPE_RS12680 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPE_RS12690 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPE_RS12735 SM00849 Metallo-beta-lactamase superfamily RPE_RS12770 SM00382 ATPases associated with a variety of cellular activities RPE_RS12790 SM00481 DNA polymerase alpha chain like domain RPE_RS12840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RPE_RS12900 SM00852 Probable molybdopterin binding domain RPE_RS12960 SM00831 Cation transporter/ATPase, N-terminus RPE_RS13055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RPE_RS13075 SM01192 RPE_RS13075 RPE_RS13075 SM01193 RPE_RS13075 RPE_RS13110 SM00861 Transketolase, pyrimidine binding domain RPE_RS13145 SM00671 Sel1-like repeats. RPE_RS13185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RPE_RS13220 SM00965 Secretin and TonB N terminus short domain RPE_RS13235 SM00912 haemagglutination activity domain RPE_RS13245 SM00382 ATPases associated with a variety of cellular activities RPE_RS13280 SM00912 haemagglutination activity domain RPE_RS13285 SM00965 Secretin and TonB N terminus short domain RPE_RS13300 SM00912 haemagglutination activity domain RPE_RS13310 SM00965 Secretin and TonB N terminus short domain RPE_RS13325 SM00912 haemagglutination activity domain RPE_RS13355 SM00382 ATPases associated with a variety of cellular activities RPE_RS13395 SM00028 Tetratricopeptide repeats RPE_RS13460 SM00861 Transketolase, pyrimidine binding domain RPE_RS13500 SM00836 DALR anticodon binding domain RPE_RS13500 SM01016 Arginyl tRNA synthetase N terminal dom RPE_RS13565 SM00448 cheY-homologous receiver domain RPE_RS13575 SM00257 Lysin motif RPE_RS13635 SM00965 Secretin and TonB N terminus short domain RPE_RS13650 SM00912 haemagglutination activity domain RPE_RS13660 SM01359 RPE_RS13660 RPE_RS13660 SM01360 RPE_RS13660 RPE_RS13675 SM00014 Acid phosphatase homologues RPE_RS13685 SM01259 RPE_RS13685 RPE_RS13695 SM00062 Bacterial periplasmic substrate-binding proteins RPE_RS13710 SM00382 ATPases associated with a variety of cellular activities RPE_RS13760 SM01144 RPE_RS13760 RPE_RS13820 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS13845 SM00091 PAS domain RPE_RS13845 SM00387 Histidine kinase-like ATPases RPE_RS13845 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS13850 SM00382 ATPases associated with a variety of cellular activities RPE_RS13850 SM00448 cheY-homologous receiver domain RPE_RS13855 SM00091 PAS domain RPE_RS13855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS13855 SM00387 Histidine kinase-like ATPases RPE_RS13855 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS13860 SM00382 ATPases associated with a variety of cellular activities RPE_RS13860 SM00448 cheY-homologous receiver domain RPE_RS13880 SM00434 DNA Topoisomerase IV RPE_RS14005 SM00487 DEAD-like helicases superfamily RPE_RS14005 SM00490 helicase superfamily c-terminal domain RPE_RS14015 SM00487 DEAD-like helicases superfamily RPE_RS14015 SM00490 helicase superfamily c-terminal domain RPE_RS14015 SM00982 RPE_RS14015 RPE_RS14015 SM01058 CarD-like/TRCF domain RPE_RS14040 SM00992 Hemimethylated DNA-binding protein YccV like RPE_RS14065 SM00829 Enoylreductase RPE_RS14160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS14160 SM00387 Histidine kinase-like ATPases RPE_RS14165 SM00421 helix_turn_helix, Lux Regulon RPE_RS14165 SM00448 cheY-homologous receiver domain RPE_RS14200 SM00411 bacterial (prokaryotic) histone like domain RPE_RS14205 SM00422 helix_turn_helix, mercury resistance RPE_RS14245 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS14245 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS14265 SM00382 ATPases associated with a variety of cellular activities RPE_RS14340 SM00881 CoA binding domain RPE_RS14365 SM00267 diguanylate cyclase RPE_RS14390 SM00936 Penicillin-binding protein 5, C-terminal domain RPE_RS14465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS14465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS14470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS14470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS14500 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS14500 SM01091 Transporter associated domain RPE_RS14605 SM01323 RPE_RS14605 RPE_RS14620 SM00878 Biotin carboxylase C-terminal domain RPE_RS14660 SM00357 Cold shock protein domain RPE_RS14725 SM00841 Elongation factor P, C-terminal RPE_RS14725 SM01185 RPE_RS14725 RPE_RS14780 SM00052 Putative diguanylate phosphodiesterase RPE_RS14780 SM00267 diguanylate cyclase RPE_RS14795 SM00859 Semialdehyde dehydrogenase, NAD binding domain RPE_RS14805 SM00387 Histidine kinase-like ATPases RPE_RS14805 SM00433 TopoisomeraseII RPE_RS14865 SM00487 DEAD-like helicases superfamily RPE_RS14865 SM00490 helicase superfamily c-terminal domain RPE_RS14870 SM00267 diguanylate cyclase RPE_RS14900 SM00382 ATPases associated with a variety of cellular activities RPE_RS14950 SM00937 RPE_RS14950 RPE_RS14960 SM00646 RPE_RS14960 RPE_RS15010 SM00878 Biotin carboxylase C-terminal domain RPE_RS15015 SM00387 Histidine kinase-like ATPases RPE_RS15015 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS15020 SM00448 cheY-homologous receiver domain RPE_RS15025 SM00387 Histidine kinase-like ATPases RPE_RS15025 SM00448 cheY-homologous receiver domain RPE_RS15035 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS15070 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RPE_RS15070 SM01080 RPE_RS15070 RPE_RS15105 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS15115 SM01004 Delta-aminolevulinic acid dehydratase RPE_RS15140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RPE_RS15140 SM00387 Histidine kinase-like ATPases RPE_RS15155 SM00434 DNA Topoisomerase IV RPE_RS15165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS15180 SM00358 Double-stranded RNA binding motif RPE_RS15180 SM00535 Ribonuclease III family RPE_RS15200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RPE_RS15200 SM00954 Region found in RelA / SpoT proteins RPE_RS15205 SM01409 RPE_RS15205 RPE_RS15215 SM00986 Uracil DNA glycosylase superfamily RPE_RS15215 SM00987 UreE urease accessory protein, C-terminal domain RPE_RS15230 SM01130 RPE_RS15230 RPE_RS15255 SM00796 Allophanate hydrolase subunit 1 RPE_RS15260 SM00797 Allophanate hydrolase subunit 2 RPE_RS15270 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS15335 SM00382 ATPases associated with a variety of cellular activities RPE_RS15340 SM00382 ATPases associated with a variety of cellular activities RPE_RS15475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RPE_RS15530 SM00900 RPE_RS15530 RPE_RS15540 SM00710 Parallel beta-helix repeats RPE_RS15540 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses RPE_RS15545 SM00382 ATPases associated with a variety of cellular activities RPE_RS15575 SM00072 Guanylate kinase homologues. RPE_RS15585 SM00382 ATPases associated with a variety of cellular activities RPE_RS15590 SM00382 ATPases associated with a variety of cellular activities RPE_RS15615 SM00345 helix_turn_helix gluconate operon transcriptional repressor RPE_RS15615 SM00866 RPE_RS15615 RPE_RS15635 SM00382 ATPases associated with a variety of cellular activities RPE_RS15690 SM00382 ATPases associated with a variety of cellular activities RPE_RS15705 SM00327 von Willebrand factor (vWF) type A domain RPE_RS15715 SM00327 von Willebrand factor (vWF) type A domain RPE_RS15730 SM00382 ATPases associated with a variety of cellular activities RPE_RS15745 SM00062 Bacterial periplasmic substrate-binding proteins RPE_RS15750 SM00564 beta-propeller repeat RPE_RS15760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS15760 SM00387 Histidine kinase-like ATPases RPE_RS15765 SM00421 helix_turn_helix, Lux Regulon RPE_RS15765 SM00448 cheY-homologous receiver domain RPE_RS15810 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS15830 SM00382 ATPases associated with a variety of cellular activities RPE_RS15905 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS15955 SM00382 ATPases associated with a variety of cellular activities RPE_RS15955 SM00930 RPE_RS15955 RPE_RS15995 SM00062 Bacterial periplasmic substrate-binding proteins RPE_RS16010 SM00382 ATPases associated with a variety of cellular activities RPE_RS16015 SM00903 Flavin reductase like domain RPE_RS16045 SM00881 CoA binding domain RPE_RS16060 SM00062 Bacterial periplasmic substrate-binding proteins RPE_RS16070 SM00382 ATPases associated with a variety of cellular activities RPE_RS16075 SM00382 ATPases associated with a variety of cellular activities RPE_RS16100 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS16110 SM01092 CO dehydrogenase flavoprotein C-terminal domain RPE_RS16135 SM00345 helix_turn_helix gluconate operon transcriptional repressor RPE_RS16135 SM00895 RPE_RS16135 RPE_RS16185 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS16190 SM01034 Sensors of blue-light using FAD RPE_RS16200 SM00966 SpoVT / AbrB like domain RPE_RS16225 SM00912 haemagglutination activity domain RPE_RS16240 SM00965 Secretin and TonB N terminus short domain RPE_RS16375 SM00829 Enoylreductase RPE_RS16385 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS16385 SM01240 RPE_RS16385 RPE_RS16425 SM00919 Malic enzyme, NAD binding domain RPE_RS16425 SM01274 RPE_RS16425 RPE_RS16440 SM00474 3'-5' exonuclease RPE_RS16480 SM00357 Cold shock protein domain RPE_RS16485 SM00562 RPE_RS16485 RPE_RS16495 SM00382 ATPases associated with a variety of cellular activities RPE_RS16540 SM00650 Ribosomal RNA adenine dimethylases RPE_RS16545 SM00829 Enoylreductase RPE_RS16560 SM00072 Guanylate kinase homologues. RPE_RS16575 SM00825 Beta-ketoacyl synthase RPE_RS16580 SM00823 Phosphopantetheine attachment site RPE_RS16585 SM00822 RPE_RS16585 RPE_RS16590 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RPE_RS16595 SM00267 diguanylate cyclase RPE_RS16645 SM00382 ATPases associated with a variety of cellular activities RPE_RS16660 SM00382 ATPases associated with a variety of cellular activities RPE_RS16670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS16670 SM00387 Histidine kinase-like ATPases RPE_RS16670 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS16675 SM00448 cheY-homologous receiver domain RPE_RS16675 SM00862 Transcriptional regulatory protein, C terminal RPE_RS16710 SM00267 diguanylate cyclase RPE_RS16715 SM01005 Alanine racemase, C-terminal domain RPE_RS16735 SM00382 ATPases associated with a variety of cellular activities RPE_RS16750 SM00822 RPE_RS16750 RPE_RS16815 SM00845 GatB domain RPE_RS16875 SM00732 Likely ribonuclease with RNase H fold. RPE_RS16885 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS16890 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS16910 SM01207 RPE_RS16910 RPE_RS16930 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RPE_RS16930 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RPE_RS16930 SM00493 RPE_RS16930 RPE_RS16935 SM00316 Ribosomal protein S1-like RNA-binding domain RPE_RS16935 SM00955 RPE_RS16935 RPE_RS16960 SM00267 diguanylate cyclase RPE_RS16960 SM00448 cheY-homologous receiver domain RPE_RS16965 SM00448 cheY-homologous receiver domain RPE_RS17060 SM00382 ATPases associated with a variety of cellular activities RPE_RS17060 SM01086 C-terminal, D2-small domain, of ClpB protein RPE_RS17080 SM00271 DnaJ molecular chaperone homology domain RPE_RS17095 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS17145 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS17150 SM00116 Domain in cystathionine beta-synthase and other proteins. RPE_RS17150 SM00924 MgtE intracellular N domain RPE_RS17175 SM00764 Citrate lyase ligase C-terminal domain RPE_RS17240 SM00878 Biotin carboxylase C-terminal domain RPE_RS17270 SM00267 diguanylate cyclase RPE_RS17285 SM00387 Histidine kinase-like ATPases RPE_RS17285 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS17290 SM00448 cheY-homologous receiver domain RPE_RS17290 SM00862 Transcriptional regulatory protein, C terminal RPE_RS17315 SM00448 cheY-homologous receiver domain RPE_RS17395 SM00965 Secretin and TonB N terminus short domain RPE_RS17410 SM00912 haemagglutination activity domain RPE_RS17425 SM00965 Secretin and TonB N terminus short domain RPE_RS17470 SM00382 ATPases associated with a variety of cellular activities RPE_RS17485 SM00710 Parallel beta-helix repeats RPE_RS17555 SM00984 UDP binding domain RPE_RS17585 SM00382 ATPases associated with a variety of cellular activities RPE_RS17595 SM00710 Parallel beta-helix repeats RPE_RS17600 SM00421 helix_turn_helix, Lux Regulon RPE_RS17640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS17640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS17645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS17645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS17645 SM01049 RPE_RS17645 RPE_RS17650 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS17655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS17655 SM00091 PAS domain RPE_RS17655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS17655 SM00387 Histidine kinase-like ATPases RPE_RS17660 SM00564 beta-propeller repeat RPE_RS17670 SM01130 RPE_RS17670 RPE_RS17710 SM00477 DNA/RNA non-specific endonuclease RPE_RS17710 SM00892 DNA/RNA non-specific endonuclease RPE_RS17770 SM00363 S4 RNA-binding domain RPE_RS17790 SM01034 Sensors of blue-light using FAD RPE_RS17815 SM00382 ATPases associated with a variety of cellular activities RPE_RS17820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RPE_RS17825 SM00829 Enoylreductase RPE_RS17845 SM00662 RNA polymerases D RPE_RS17910 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RPE_RS17915 SM01374 RPE_RS17915 RPE_RS17935 SM00322 K homology RNA-binding domain RPE_RS17950 SM01382 RPE_RS17950 RPE_RS17950 SM01383 RPE_RS17950 RPE_RS17970 SM01403 RPE_RS17970 RPE_RS17980 SM00838 Elongation factor G C-terminus RPE_RS17980 SM00889 Elongation factor G, domain IV RPE_RS18005 SM00382 ATPases associated with a variety of cellular activities RPE_RS18015 SM00663 RNA polymerase I subunit A N-terminus RPE_RS18045 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS18065 SM00649 Ribosomal protein L11/L12 RPE_RS18070 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RPE_RS18070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RPE_RS18080 SM00318 Staphylococcal nuclease homologues RPE_RS18090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS18090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS18110 SM00855 Phosphoglycerate mutase family RPE_RS18115 SM00822 RPE_RS18115 RPE_RS18165 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS18165 SM00091 PAS domain RPE_RS18165 SM00387 Histidine kinase-like ATPases RPE_RS18165 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS18165 SM00448 cheY-homologous receiver domain RPE_RS18175 SM00448 cheY-homologous receiver domain RPE_RS18180 SM00073 Histidine Phosphotransfer domain RPE_RS18180 SM00260 Two component signalling adaptor domain RPE_RS18180 SM00387 Histidine kinase-like ATPases RPE_RS18180 SM01231 RPE_RS18180 RPE_RS18185 SM00448 cheY-homologous receiver domain RPE_RS18190 SM00138 Methyltransferase, chemotaxis proteins RPE_RS18195 SM00567 E-Z type HEAT repeats RPE_RS18200 SM00448 cheY-homologous receiver domain RPE_RS18205 SM00260 Two component signalling adaptor domain RPE_RS18210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS18280 SM01068 Putative carbohydrate binding domain RPE_RS18285 SM00911 HWE histidine kinase RPE_RS18290 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS18290 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS18310 SM00226 Low molecular weight phosphatase family RPE_RS18315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RPE_RS18330 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RPE_RS18350 SM00460 Transglutaminase/protease-like homologues RPE_RS18390 SM00822 RPE_RS18390 RPE_RS18420 SM00899 RPE_RS18420 RPE_RS18435 SM00967 RNA 2'-O ribose methyltransferase substrate binding RPE_RS18460 SM00382 ATPases associated with a variety of cellular activities RPE_RS18500 SM00052 Putative diguanylate phosphodiesterase RPE_RS18500 SM00267 diguanylate cyclase RPE_RS18500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS18565 SM01350 RPE_RS18565 RPE_RS18600 SM00642 Alpha-amylase domain RPE_RS18605 SM00642 Alpha-amylase domain RPE_RS18610 SM00642 Alpha-amylase domain RPE_RS18615 SM00642 Alpha-amylase domain RPE_RS18625 SM00642 Alpha-amylase domain RPE_RS18640 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen RPE_RS18665 SM00988 UreE urease accessory protein, N-terminal domain RPE_RS18680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RPE_RS18700 SM00382 ATPases associated with a variety of cellular activities RPE_RS18705 SM00382 ATPases associated with a variety of cellular activities RPE_RS18725 SM00487 DEAD-like helicases superfamily RPE_RS18725 SM00490 helicase superfamily c-terminal domain RPE_RS18735 SM00357 Cold shock protein domain RPE_RS18790 SM00028 Tetratricopeptide repeats RPE_RS18810 SM00382 ATPases associated with a variety of cellular activities RPE_RS18870 SM01018 B12 binding domain RPE_RS18910 SM00346 helix_turn_helix isocitrate lyase regulation RPE_RS18915 SM00382 ATPases associated with a variety of cellular activities RPE_RS18920 SM00382 ATPases associated with a variety of cellular activities RPE_RS18965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS18965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS18975 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS18985 SM00382 ATPases associated with a variety of cellular activities RPE_RS18990 SM00382 ATPases associated with a variety of cellular activities RPE_RS19000 SM00267 diguanylate cyclase RPE_RS19095 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS19145 SM00857 Resolvase, N terminal domain RPE_RS19150 SM00869 Autotransporter beta-domain RPE_RS19230 SM00411 bacterial (prokaryotic) histone like domain RPE_RS19235 SM00855 Phosphoglycerate mutase family RPE_RS19245 SM00382 ATPases associated with a variety of cellular activities RPE_RS19250 SM00382 ATPases associated with a variety of cellular activities RPE_RS19255 SM00382 ATPases associated with a variety of cellular activities RPE_RS19285 SM00382 ATPases associated with a variety of cellular activities RPE_RS19300 SM00902 Iron hydrogenase small subunit RPE_RS19300 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPE_RS19305 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPE_RS19395 SM00382 ATPases associated with a variety of cellular activities RPE_RS19430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RPE_RS19430 SM00382 ATPases associated with a variety of cellular activities RPE_RS19440 SM00345 helix_turn_helix gluconate operon transcriptional repressor RPE_RS19460 SM00382 ATPases associated with a variety of cellular activities RPE_RS19565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS19565 SM00331 Sigma factor PP2C-like phosphatases RPE_RS19600 SM00421 helix_turn_helix, Lux Regulon RPE_RS19600 SM00448 cheY-homologous receiver domain RPE_RS19610 SM00073 Histidine Phosphotransfer domain RPE_RS19610 SM00387 Histidine kinase-like ATPases RPE_RS19610 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS19610 SM00448 cheY-homologous receiver domain RPE_RS19615 SM00052 Putative diguanylate phosphodiesterase RPE_RS19615 SM00448 cheY-homologous receiver domain RPE_RS19625 SM00138 Methyltransferase, chemotaxis proteins RPE_RS19630 SM00260 Two component signalling adaptor domain RPE_RS19635 SM00073 Histidine Phosphotransfer domain RPE_RS19635 SM00260 Two component signalling adaptor domain RPE_RS19635 SM00387 Histidine kinase-like ATPases RPE_RS19635 SM00448 cheY-homologous receiver domain RPE_RS19635 SM01231 RPE_RS19635 RPE_RS19640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS19640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS19645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS19645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS19645 SM01358 RPE_RS19645 RPE_RS19650 SM00448 cheY-homologous receiver domain RPE_RS19655 SM00749 bacterial OsmY and nodulation domain RPE_RS19660 SM00220 Serine/Threonine protein kinases, catalytic domain RPE_RS19675 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS19680 SM00989 RPE_RS19680 RPE_RS19685 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS19705 SM00746 metallochaperone-like domain RPE_RS19720 SM00267 diguanylate cyclase RPE_RS19725 SM00644 RPE_RS19725 RPE_RS19750 SM00382 ATPases associated with a variety of cellular activities RPE_RS19800 SM00851 MGS-like domain RPE_RS19800 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RPE_RS19815 SM00344 helix_turn_helix ASNC type RPE_RS19855 SM01049 RPE_RS19855 RPE_RS19860 SM00382 ATPases associated with a variety of cellular activities RPE_RS19900 SM00849 Metallo-beta-lactamase superfamily RPE_RS19945 SM00448 cheY-homologous receiver domain RPE_RS19945 SM00862 Transcriptional regulatory protein, C terminal RPE_RS19950 SM00387 Histidine kinase-like ATPases RPE_RS19950 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS19965 SM00448 cheY-homologous receiver domain RPE_RS19965 SM00862 Transcriptional regulatory protein, C terminal RPE_RS20095 SM00382 ATPases associated with a variety of cellular activities RPE_RS20160 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS20190 SM00470 ParB-like nuclease domain RPE_RS20205 SM00411 bacterial (prokaryotic) histone like domain RPE_RS20215 SM00487 DEAD-like helicases superfamily RPE_RS20305 SM00091 PAS domain RPE_RS20305 SM00387 Histidine kinase-like ATPases RPE_RS20305 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS20330 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS20330 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS20335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS20335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS20375 SM00882 Coenzyme A transferase RPE_RS20380 SM00882 Coenzyme A transferase RPE_RS20405 SM00382 ATPases associated with a variety of cellular activities RPE_RS20410 SM00052 Putative diguanylate phosphodiesterase RPE_RS20410 SM00091 PAS domain RPE_RS20410 SM00267 diguanylate cyclase RPE_RS20430 SM00267 diguanylate cyclase RPE_RS20435 SM01001 AIR carboxylase RPE_RS20480 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RPE_RS20480 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RPE_RS20495 SM00966 SpoVT / AbrB like domain RPE_RS20510 SM00382 ATPases associated with a variety of cellular activities RPE_RS20510 SM00448 cheY-homologous receiver domain RPE_RS20560 SM00028 Tetratricopeptide repeats RPE_RS20590 SM00346 helix_turn_helix isocitrate lyase regulation RPE_RS20695 SM00788 Adenylosuccinate synthetase RPE_RS20705 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS20720 SM00052 Putative diguanylate phosphodiesterase RPE_RS20720 SM00267 diguanylate cyclase RPE_RS20725 SM00849 Metallo-beta-lactamase superfamily RPE_RS20725 SM01027 Beta-Casp domain RPE_RS20730 SM01400 RPE_RS20730 RPE_RS20735 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RPE_RS20765 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS20765 SM00091 PAS domain RPE_RS20765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS20770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS20770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS20785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS20785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS20785 SM01049 RPE_RS20785 RPE_RS20790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS20790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS20790 SM01049 RPE_RS20790 RPE_RS20845 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS20850 SM00838 Elongation factor G C-terminus RPE_RS20850 SM00889 Elongation factor G, domain IV RPE_RS20890 SM00563 Phosphate acyltransferases RPE_RS20930 SM00849 Metallo-beta-lactamase superfamily RPE_RS20940 SM00487 DEAD-like helicases superfamily RPE_RS20940 SM00490 helicase superfamily c-terminal domain RPE_RS20980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS20980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS21000 SM00996 S-adenosyl-L-homocysteine hydrolase RPE_RS21000 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RPE_RS21015 SM00984 UDP binding domain RPE_RS21020 SM00028 Tetratricopeptide repeats RPE_RS21035 SM00382 ATPases associated with a variety of cellular activities RPE_RS21040 SM00382 ATPases associated with a variety of cellular activities RPE_RS21105 SM00382 ATPases associated with a variety of cellular activities RPE_RS21110 SM00382 ATPases associated with a variety of cellular activities RPE_RS21115 SM00382 ATPases associated with a variety of cellular activities RPE_RS21145 SM00382 ATPases associated with a variety of cellular activities RPE_RS21165 SM00858 RPE_RS21165 RPE_RS21175 SM00861 Transketolase, pyrimidine binding domain RPE_RS21225 SM00382 ATPases associated with a variety of cellular activities RPE_RS21330 SM00382 ATPases associated with a variety of cellular activities RPE_RS21335 SM00448 cheY-homologous receiver domain RPE_RS21335 SM00862 Transcriptional regulatory protein, C terminal RPE_RS21360 SM00460 Transglutaminase/protease-like homologues RPE_RS21365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS21365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS21365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS21385 SM00138 Methyltransferase, chemotaxis proteins RPE_RS21390 SM00448 cheY-homologous receiver domain RPE_RS21395 SM00448 cheY-homologous receiver domain RPE_RS21400 SM00260 Two component signalling adaptor domain RPE_RS21405 SM00073 Histidine Phosphotransfer domain RPE_RS21405 SM00260 Two component signalling adaptor domain RPE_RS21405 SM00387 Histidine kinase-like ATPases RPE_RS21405 SM00448 cheY-homologous receiver domain RPE_RS21405 SM01231 RPE_RS21405 RPE_RS21445 SM00382 ATPases associated with a variety of cellular activities RPE_RS21475 SM00858 RPE_RS21475 RPE_RS21560 SM00357 Cold shock protein domain RPE_RS21600 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS21695 SM00382 ATPases associated with a variety of cellular activities RPE_RS21695 SM01086 C-terminal, D2-small domain, of ClpB protein RPE_RS21715 SM00830 Chorismate mutase type II RPE_RS21775 SM00849 Metallo-beta-lactamase superfamily RPE_RS21800 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS21800 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS21805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RPE_RS21810 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS21975 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RPE_RS21975 SM01080 RPE_RS21975 RPE_RS21985 SM00829 Enoylreductase RPE_RS22080 SM00028 Tetratricopeptide repeats RPE_RS22090 SM00986 Uracil DNA glycosylase superfamily RPE_RS22090 SM00987 UreE urease accessory protein, C-terminal domain RPE_RS22105 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS22115 SM00347 helix_turn_helix multiple antibiotic resistance protein RPE_RS22120 SM00852 Probable molybdopterin binding domain RPE_RS22140 SM00478 endonuclease III RPE_RS22140 SM00525 RPE_RS22140 RPE_RS22145 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS22185 SM00968 SMC proteins Flexible Hinge Domain RPE_RS22250 SM00028 Tetratricopeptide repeats RPE_RS22265 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS22295 SM00052 Putative diguanylate phosphodiesterase RPE_RS22335 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS22350 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS22380 SM00226 Low molecular weight phosphatase family RPE_RS22440 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS22455 SM00421 helix_turn_helix, Lux Regulon RPE_RS22460 SM00421 helix_turn_helix, Lux Regulon RPE_RS22485 SM00834 Putative regulatory protein RPE_RS22490 SM00404 Protein tyrosine phosphatase, catalytic domain motif RPE_RS22560 SM00893 Electron transfer flavoprotein domain RPE_RS22565 SM00893 Electron transfer flavoprotein domain RPE_RS22690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RPE_RS22690 SM00382 ATPases associated with a variety of cellular activities RPE_RS22720 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RPE_RS22720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS22750 SM00912 haemagglutination activity domain RPE_RS22765 SM00965 Secretin and TonB N terminus short domain RPE_RS22780 SM00448 cheY-homologous receiver domain RPE_RS22780 SM00862 Transcriptional regulatory protein, C terminal RPE_RS22785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS22785 SM00387 Histidine kinase-like ATPases RPE_RS22785 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS22815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS22815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS22815 SM01358 RPE_RS22815 RPE_RS22825 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPE_RS22830 SM01092 CO dehydrogenase flavoprotein C-terminal domain RPE_RS22865 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RPE_RS22890 SM00957 SecA DEAD-like domain RPE_RS22890 SM00958 SecA preprotein cross-linking domain RPE_RS22930 SM00855 Phosphoglycerate mutase family RPE_RS22940 SM00271 DnaJ molecular chaperone homology domain RPE_RS22960 SM00834 Putative regulatory protein RPE_RS22970 SM00382 ATPases associated with a variety of cellular activities RPE_RS22995 SM00387 Histidine kinase-like ATPases RPE_RS22995 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS22995 SM00448 cheY-homologous receiver domain RPE_RS23000 SM00421 helix_turn_helix, Lux Regulon RPE_RS23000 SM00448 cheY-homologous receiver domain RPE_RS23040 SM01209 RPE_RS23040 RPE_RS23040 SM01210 RPE_RS23040 RPE_RS23120 SM00387 Histidine kinase-like ATPases RPE_RS23120 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS23125 SM00448 cheY-homologous receiver domain RPE_RS23125 SM00862 Transcriptional regulatory protein, C terminal RPE_RS23130 SM00100 Cyclic nucleotide-monophosphate binding domain RPE_RS23130 SM00419 helix_turn_helix, cAMP Regulatory protein RPE_RS23135 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RPE_RS23160 SM01116 RPE_RS23160 RPE_RS23165 SM00382 ATPases associated with a variety of cellular activities RPE_RS23180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS23180 SM00091 PAS domain RPE_RS23180 SM00382 ATPases associated with a variety of cellular activities RPE_RS23205 SM00155 Phospholipase D. Active site motifs. RPE_RS23225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RPE_RS23225 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPE_RS23230 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPE_RS23255 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RPE_RS23265 SM00880 RPE_RS23265 RPE_RS23270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS23270 SM00387 Histidine kinase-like ATPases RPE_RS23270 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS23275 SM00448 cheY-homologous receiver domain RPE_RS23275 SM00862 Transcriptional regulatory protein, C terminal RPE_RS23305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS23310 SM00091 PAS domain RPE_RS23320 SM00382 ATPases associated with a variety of cellular activities RPE_RS23340 SM00448 cheY-homologous receiver domain RPE_RS23345 SM00138 Methyltransferase, chemotaxis proteins RPE_RS23350 SM00260 Two component signalling adaptor domain RPE_RS23355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS23355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS23360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS23360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS23365 SM00260 Two component signalling adaptor domain RPE_RS23370 SM00073 Histidine Phosphotransfer domain RPE_RS23370 SM00260 Two component signalling adaptor domain RPE_RS23370 SM00387 Histidine kinase-like ATPases RPE_RS23370 SM01231 RPE_RS23370 RPE_RS23375 SM00448 cheY-homologous receiver domain RPE_RS23385 SM00829 Enoylreductase RPE_RS23415 SM00382 ATPases associated with a variety of cellular activities RPE_RS23435 SM00382 ATPases associated with a variety of cellular activities RPE_RS23480 SM00382 ATPases associated with a variety of cellular activities RPE_RS23500 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS23515 SM00052 Putative diguanylate phosphodiesterase RPE_RS23515 SM00267 diguanylate cyclase RPE_RS23565 SM00822 RPE_RS23565 RPE_RS23580 SM00671 Sel1-like repeats. RPE_RS23620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RPE_RS23625 SM00861 Transketolase, pyrimidine binding domain RPE_RS23710 SM00530 Helix-turn-helix XRE-family like proteins RPE_RS23820 SM00382 ATPases associated with a variety of cellular activities RPE_RS23830 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RPE_RS23845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RPE_RS23850 SM00729 Elongator protein 3, MiaB family, Radical SAM RPE_RS23910 SM00421 helix_turn_helix, Lux Regulon RPE_RS23910 SM00448 cheY-homologous receiver domain RPE_RS23915 SM00387 Histidine kinase-like ATPases RPE_RS23915 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS23915 SM00448 cheY-homologous receiver domain RPE_RS23925 SM00849 Metallo-beta-lactamase superfamily RPE_RS23940 SM00382 ATPases associated with a variety of cellular activities RPE_RS23955 SM00833 Cobalamin synthesis protein cobW C-terminal domain RPE_RS23960 SM00320 WD40 repeats RPE_RS24025 SM00244 prohibitin homologues RPE_RS24050 SM00382 ATPases associated with a variety of cellular activities RPE_RS24075 SM00487 DEAD-like helicases superfamily RPE_RS24075 SM00490 helicase superfamily c-terminal domain RPE_RS24075 SM00847 Helicase associated domain (HA2) Add an annotation RPE_RS24090 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RPE_RS24090 SM00474 3'-5' exonuclease RPE_RS24090 SM00475 5'-3' exonuclease RPE_RS24090 SM00482 DNA polymerase A domain RPE_RS24125 SM00563 Phosphate acyltransferases RPE_RS24140 SM00382 ATPases associated with a variety of cellular activities RPE_RS24150 SM00448 cheY-homologous receiver domain RPE_RS24220 SM00893 Electron transfer flavoprotein domain RPE_RS24225 SM00893 Electron transfer flavoprotein domain RPE_RS24245 SM00387 Histidine kinase-like ATPases RPE_RS24245 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS24245 SM00448 cheY-homologous receiver domain RPE_RS24255 SM00478 endonuclease III RPE_RS24290 SM00448 cheY-homologous receiver domain RPE_RS24295 SM00387 Histidine kinase-like ATPases RPE_RS24295 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS24295 SM00448 cheY-homologous receiver domain RPE_RS24310 SM00642 Alpha-amylase domain RPE_RS24420 SM00448 cheY-homologous receiver domain RPE_RS24420 SM00862 Transcriptional regulatory protein, C terminal RPE_RS24430 SM00382 ATPases associated with a variety of cellular activities RPE_RS24450 SM00387 Histidine kinase-like ATPases RPE_RS24450 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS24475 SM00387 Histidine kinase-like ATPases RPE_RS24480 SM00387 Histidine kinase-like ATPases RPE_RS24485 SM00448 cheY-homologous receiver domain RPE_RS24485 SM00862 Transcriptional regulatory protein, C terminal RPE_RS24550 SM00341 Helicase and RNase D C-terminal RPE_RS24550 SM00487 DEAD-like helicases superfamily RPE_RS24550 SM00490 helicase superfamily c-terminal domain RPE_RS24550 SM00956 RPE_RS24550 RPE_RS24555 SM00834 Putative regulatory protein RPE_RS24565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RPE_RS24630 SM00052 Putative diguanylate phosphodiesterase RPE_RS24630 SM00267 diguanylate cyclase RPE_RS24665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS24665 SM00091 PAS domain RPE_RS24665 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS24690 SM00052 Putative diguanylate phosphodiesterase RPE_RS24690 SM00267 diguanylate cyclase RPE_RS24690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RPE_RS24715 SM00965 Secretin and TonB N terminus short domain RPE_RS24730 SM00028 Tetratricopeptide repeats RPE_RS24765 SM00267 diguanylate cyclase RPE_RS24785 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS24785 SM00387 Histidine kinase-like ATPases RPE_RS24785 SM00388 His Kinase A (phosphoacceptor) domain RPE_RS24785 SM00448 cheY-homologous receiver domain RPE_RS24800 SM00342 helix_turn_helix, arabinose operon control protein RPE_RS24810 SM00052 Putative diguanylate phosphodiesterase RPE_RS24810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RPE_RS24810 SM00091 PAS domain RPE_RS24810 SM00267 diguanylate cyclase