RPE_RS00005	SSF48295	TrpR-like
RPE_RS00005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00010	SSF55979	DNA clamp
RPE_RS00015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00025	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS00025	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS00025	SSF56719	Type II DNA topoisomerase
RPE_RS00030	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS00040	SSF46785	"Winged helix" DNA-binding domain
RPE_RS00040	SSF54909	Dimeric alpha+beta barrel
RPE_RS00055	SSF55008	HMA, heavy metal-associated domain
RPE_RS00055	SSF56784	HAD-like
RPE_RS00055	SSF81653	Calcium ATPase, transduction domain A
RPE_RS00055	SSF81665	Calcium ATPase, transmembrane domain M
RPE_RS00065	SSF54862	4Fe-4S ferredoxins
RPE_RS00070	SSF46626	Cytochrome c
RPE_RS00080	SSF46626	Cytochrome c
RPE_RS00085	SSF81442	Cytochrome c oxidase subunit I-like
RPE_RS00090	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS00090	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00095	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00100	SSF52833	Thioredoxin-like
RPE_RS00105	SSF47616	GST C-terminal domain-like
RPE_RS00105	SSF52833	Thioredoxin-like
RPE_RS00110	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00115	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS00120	SSF103473	MFS general substrate transporter
RPE_RS00125	SSF52335	Methylglyoxal synthase-like
RPE_RS00125	SSF53927	Cytidine deaminase-like
RPE_RS00135	SSF48013	NusB-like
RPE_RS00135	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00150	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS00155	SSF50199	Staphylococcal nuclease
RPE_RS00160	SSF53649	Alkaline phosphatase-like
RPE_RS00165	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS00165	SSF69864	Argininosuccinate synthetase, C-terminal domain
RPE_RS00170	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPE_RS00180	SSF109604	HD-domain/PDEase-like
RPE_RS00185	SSF102114	Radical SAM enzymes
RPE_RS00195	SSF50129	GroES-like
RPE_RS00195	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00200	SSF51905	FAD/NAD(P)-binding domain
RPE_RS00200	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS00205	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS00210	SSF50324	Inorganic pyrophosphatase
RPE_RS00215	SSF53187	Zn-dependent exopeptidases
RPE_RS00215	SSF55031	Bacterial exopeptidase dimerisation domain
RPE_RS00220	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS00225	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00225	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPE_RS00230	SSF69786	YggU-like
RPE_RS00255	SSF54427	NTF2-like
RPE_RS00260	SSF52317	Class I glutamine amidotransferase-like
RPE_RS00265	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00270	SSF158682	TerB-like
RPE_RS00275	SSF55073	Nucleotide cyclase
RPE_RS00280	SSF48264	Cytochrome P450
RPE_RS00285	SSF103473	MFS general substrate transporter
RPE_RS00295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00295	SSF52980	Restriction endonuclease-like
RPE_RS00310	SSF48452	TPR-like
RPE_RS00320	SSF69618	HemD-like
RPE_RS00325	SSF53067	Actin-like ATPase domain
RPE_RS00330	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS00330	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00335	SSF88697	PUA domain-like
RPE_RS00340	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00345	SSF56801	Acetyl-CoA synthetase-like
RPE_RS00355	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00365	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS00370	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS00370	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS00375	SSF49777	PEBP-like
RPE_RS00395	SSF53067	Actin-like ATPase domain
RPE_RS00405	SSF48613	Heme oxygenase-like
RPE_RS00410	SSF48264	Cytochrome P450
RPE_RS00415	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00420	SSF50199	Staphylococcal nuclease
RPE_RS00420	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
RPE_RS00425	SSF54001	Cysteine proteinases
RPE_RS00430	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS00435	SSF54001	Cysteine proteinases
RPE_RS00445	SSF141868	EAL domain-like
RPE_RS00445	SSF55073	Nucleotide cyclase
RPE_RS00445	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS00450	SSF55166	Hedgehog/DD-peptidase
RPE_RS00460	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS00470	SSF55920	Creatinase/aminopeptidase
RPE_RS00495	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00500	SSF100939	SPOC domain-like
RPE_RS00510	SSF102712	JAB1/MPN domain
RPE_RS00510	SSF47781	RuvA domain 2-like
RPE_RS00515	SSF50882	beta-Barrel protease inhibitors
RPE_RS00520	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00520	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_RS00525	SSF161098	MetI-like
RPE_RS00530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00535	SSF53850	Periplasmic binding protein-like II
RPE_RS00540	SSF102215	Creatininase
RPE_RS00550	SSF51395	FMN-linked oxidoreductases
RPE_RS00555	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS00560	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_RS00560	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_RS00565	SSF50129	GroES-like
RPE_RS00565	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00575	SSF48452	TPR-like
RPE_RS00575	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00580	SSF140804	YidB-like
RPE_RS00590	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00595	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS00595	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS00600	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS00605	SSF52096	ClpP/crotonase
RPE_RS00610	SSF50199	Staphylococcal nuclease
RPE_RS00620	SSF141259	CarD-like
RPE_RS00630	SSF54862	4Fe-4S ferredoxins
RPE_RS00635	SSF55174	Alpha-L RNA-binding motif
RPE_RS00640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00650	SSF143800	L28p-like
RPE_RS00655	SSF103190	Sensory domain-like
RPE_RS00655	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS00655	SSF52172	CheY-like
RPE_RS00655	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS00655	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS00665	SSF53300	vWA-like
RPE_RS00680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00690	SSF46565	Chaperone J-domain
RPE_RS00695	SSF82657	BolA-like
RPE_RS00700	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS00705	SSF52096	ClpP/crotonase
RPE_RS00710	SSF56349	DNA breaking-rejoining enzymes
RPE_RS00720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00725	SSF56796	Dehydroquinate synthase-like
RPE_RS00730	SSF54631	CBS-domain pair
RPE_RS00730	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS00735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00735	SSF81767	Pre-protein crosslinking domain of SecA
RPE_RS00735	SSF81886	Helical scaffold and wing domains of SecA
RPE_RS00740	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_RS00740	SSF54534	FKBP-like
RPE_RS00745	SSF56266	DmpA/ArgJ-like
RPE_RS00750	SSF55811	Nudix
RPE_RS00755	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00765	SSF53271	PRTase-like
RPE_RS00770	SSF52833	Thioredoxin-like
RPE_RS00775	SSF56317	Carbon-nitrogen hydrolase
RPE_RS00785	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS00790	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00795	SSF53633	Carbamate kinase-like
RPE_RS00795	SSF55021	ACT-like
RPE_RS00800	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
RPE_RS00800	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS00800	SSF52009	Phosphohistidine domain
RPE_RS00800	SSF55781	GAF domain-like
RPE_RS00805	SSF75620	Release factor
RPE_RS00810	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00820	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS00825	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS00830	SSF51182	RmlC-like cupins
RPE_RS00835	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS00840	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS00845	SSF53901	Thiolase-like
RPE_RS00860	SSF141868	EAL domain-like
RPE_RS00860	SSF55073	Nucleotide cyclase
RPE_RS00875	SSF57829	Zn-binding ribosomal proteins
RPE_RS00880	SSF53955	Lysozyme-like
RPE_RS00885	SSF48576	Terpenoid synthases
RPE_RS00900	SSF54975	Acylphosphatase/BLUF domain-like
RPE_RS00905	SSF141868	EAL domain-like
RPE_RS00905	SSF55073	Nucleotide cyclase
RPE_RS00940	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS00945	SSF46785	"Winged helix" DNA-binding domain
RPE_RS00950	SSF46785	"Winged helix" DNA-binding domain
RPE_RS00955	SSF111369	HlyD-like secretion proteins
RPE_RS00960	SSF103473	MFS general substrate transporter
RPE_RS00965	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RPE_RS00965	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RPE_RS00970	SSF50249	Nucleic acid-binding proteins
RPE_RS00970	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS00970	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPE_RS00970	SSF55666	Ribonuclease PH domain 2-like
RPE_RS00975	SSF47060	S15/NS1 RNA-binding domain
RPE_RS00980	SSF55120	Pseudouridine synthase
RPE_RS00985	SSF89919	Ribosome-binding factor A, RbfA
RPE_RS00990	SSF50447	Translation proteins
RPE_RS00990	SSF52156	Initiation factor IF2/eIF5b, domain 3
RPE_RS00990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS00995	SSF55315	L30e-like
RPE_RS00995	SSF64376	YlxR-like
RPE_RS01000	SSF47794	Rad51 N-terminal domain-like
RPE_RS01000	SSF50249	Nucleic acid-binding proteins
RPE_RS01000	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPE_RS01000	SSF69705	Transcription factor NusA, N-terminal domain
RPE_RS01005	SSF74942	YhbC-like, C-terminal domain
RPE_RS01005	SSF75420	YhbC-like, N-terminal domain
RPE_RS01010	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS01015	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS01020	SSF56317	Carbon-nitrogen hydrolase
RPE_RS01025	SSF54631	CBS-domain pair
RPE_RS01025	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS01030	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPE_RS01035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01035	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RPE_RS01040	SSF102114	Radical SAM enzymes
RPE_RS01045	SSF56784	HAD-like
RPE_RS01050	SSF46785	"Winged helix" DNA-binding domain
RPE_RS01055	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS01060	SSF53067	Actin-like ATPase domain
RPE_RS01065	SSF110836	Hypothetical protein SAV1430
RPE_RS01065	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_RS01070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01075	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS01090	SSF52374	Nucleotidylyl transferase
RPE_RS01100	SSF53613	Ribokinase-like
RPE_RS01110	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS01120	SSF53720	ALDH-like
RPE_RS01130	SSF53955	Lysozyme-like
RPE_RS01130	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS01140	SSF53474	alpha/beta-Hydrolases
RPE_RS01150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01155	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS01155	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS01160	SSF52172	CheY-like
RPE_RS01170	SSF53300	vWA-like
RPE_RS01175	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS01185	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS01185	SSF52172	CheY-like
RPE_RS01185	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS01185	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS01190	SSF53474	alpha/beta-Hydrolases
RPE_RS01210	SSF103378	2-methylcitrate dehydratase PrpD
RPE_RS01215	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS01220	SSF47090	PGBD-like
RPE_RS01220	SSF50494	Trypsin-like serine proteases
RPE_RS01225	SSF69572	Activating enzymes of the ubiquitin-like proteins
RPE_RS01230	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS01230	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_RS01240	SSF48334	DNA repair protein MutS, domain III
RPE_RS01240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01240	SSF53150	DNA repair protein MutS, domain II
RPE_RS01240	SSF55271	DNA repair protein MutS, domain I
RPE_RS01250	SSF53901	Thiolase-like
RPE_RS01265	SSF53474	alpha/beta-Hydrolases
RPE_RS01270	SSF46785	"Winged helix" DNA-binding domain
RPE_RS01270	SSF53850	Periplasmic binding protein-like II
RPE_RS01275	SSF48113	Heme-dependent peroxidases
RPE_RS01280	SSF47616	GST C-terminal domain-like
RPE_RS01280	SSF52833	Thioredoxin-like
RPE_RS01285	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS01290	SSF53901	Thiolase-like
RPE_RS01295	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS01300	SSF46785	"Winged helix" DNA-binding domain
RPE_RS01305	SSF82784	OsmC-like
RPE_RS01310	SSF55021	ACT-like
RPE_RS01310	SSF81301	Nucleotidyltransferase
RPE_RS01310	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPE_RS01310	SSF81891	Poly A polymerase C-terminal region-like
RPE_RS01315	SSF103190	Sensory domain-like
RPE_RS01315	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS01315	SSF52172	CheY-like
RPE_RS01315	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS01315	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS01320	SSF54909	Dimeric alpha+beta barrel
RPE_RS01330	SSF53822	Periplasmic binding protein-like I
RPE_RS01340	SSF53720	ALDH-like
RPE_RS01345	SSF52374	Nucleotidylyl transferase
RPE_RS01350	SSF81301	Nucleotidyltransferase
RPE_RS01355	SSF75217	alpha/beta knot
RPE_RS01360	SSF51261	Duplicated hybrid motif
RPE_RS01365	SSF50156	PDZ domain-like
RPE_RS01365	SSF52096	ClpP/crotonase
RPE_RS01370	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS01375	SSF55811	Nudix
RPE_RS01385	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS01390	SSF55811	Nudix
RPE_RS01395	SSF51569	Aldolase
RPE_RS01400	SSF46689	Homeodomain-like
RPE_RS01400	SSF51182	RmlC-like cupins
RPE_RS01405	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
RPE_RS01410	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPE_RS01410	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPE_RS01410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01415	SSF52943	ATP synthase (F1-ATPase), gamma subunit
RPE_RS01420	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RPE_RS01420	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RPE_RS01420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01425	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
RPE_RS01430	SSF50685	Barwin-like endoglucanases
RPE_RS01435	SSF161219	CHY zinc finger-like
RPE_RS01435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01440	SSF47823	lambda integrase-like, N-terminal domain
RPE_RS01440	SSF56349	DNA breaking-rejoining enzymes
RPE_RS01455	SSF51905	FAD/NAD(P)-binding domain
RPE_RS01455	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_RS01465	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS01470	SSF161084	MAPEG domain-like
RPE_RS01475	SSF143880	NE0471 N-terminal domain-like
RPE_RS01485	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPE_RS01485	SSF51230	Single hybrid motif
RPE_RS01485	SSF52777	CoA-dependent acyltransferases
RPE_RS01490	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS01495	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS01495	SSF52210	Succinyl-CoA synthetase domains
RPE_RS01500	SSF52210	Succinyl-CoA synthetase domains
RPE_RS01500	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS01505	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS01505	SSF56327	LDH C-terminal domain-like
RPE_RS01510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01515	SSF55144	LigT-like
RPE_RS01520	SSF52266	SGNH hydrolase
RPE_RS01525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01540	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS01550	SSF52833	Thioredoxin-like
RPE_RS01555	SSF52016	LeuD/IlvD-like
RPE_RS01555	SSF53732	Aconitase iron-sulfur domain
RPE_RS01560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01580	SSF52833	Thioredoxin-like
RPE_RS01585	SSF81585	PsbU/PolX domain-like
RPE_RS01595	SSF47364	Domain of the SRP/SRP receptor G-proteins
RPE_RS01595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01600	SSF55120	Pseudouridine synthase
RPE_RS01605	SSF102114	Radical SAM enzymes
RPE_RS01610	SSF54506	Diaminopimelate epimerase-like
RPE_RS01615	SSF55136	Probable bacterial effector-binding domain
RPE_RS01625	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS01630	SSF56918	Light-harvesting complex subunits
RPE_RS01635	SSF56918	Light-harvesting complex subunits
RPE_RS01640	SSF47446	Signal peptide-binding domain
RPE_RS01640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01645	SSF54565	Ribosomal protein S16
RPE_RS01650	SSF50346	PRC-barrel domain
RPE_RS01650	SSF50447	Translation proteins
RPE_RS01655	SSF75217	alpha/beta knot
RPE_RS01660	SSF50104	Translation proteins SH3-like domain
RPE_RS01665	SSF53732	Aconitase iron-sulfur domain
RPE_RS01670	SSF50447	Translation proteins
RPE_RS01670	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPE_RS01670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01675	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS01695	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPE_RS01700	SSF52016	LeuD/IlvD-like
RPE_RS01705	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS01710	SSF53056	beta-carbonic anhydrase, cab
RPE_RS01715	SSF53254	Phosphoglycerate mutase-like
RPE_RS01720	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS01720	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS01725	SSF54909	Dimeric alpha+beta barrel
RPE_RS01730	SSF51366	Ribulose-phoshate binding barrel
RPE_RS01735	SSF52218	Flavoproteins
RPE_RS01740	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS01745	SSF46565	Chaperone J-domain
RPE_RS01745	SSF49493	HSP40/DnaJ peptide-binding domain
RPE_RS01745	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RPE_RS01750	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RPE_RS01750	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RPE_RS01750	SSF53067	Actin-like ATPase domain
RPE_RS01760	SSF51064	Head domain of nucleotide exchange factor GrpE
RPE_RS01760	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
RPE_RS01765	SSF46785	"Winged helix" DNA-binding domain
RPE_RS01765	SSF55781	GAF domain-like
RPE_RS01770	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS01770	SSF55666	Ribonuclease PH domain 2-like
RPE_RS01775	SSF52972	ITPase-like
RPE_RS01780	SSF102114	Radical SAM enzymes
RPE_RS01785	SSF53822	Periplasmic binding protein-like I
RPE_RS01790	SSF53790	Tetrapyrrole methylase
RPE_RS01795	SSF52980	Restriction endonuclease-like
RPE_RS01800	SSF52440	PreATP-grasp domain
RPE_RS01800	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS01805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01805	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS01815	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS01815	SSF52172	CheY-like
RPE_RS01815	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS01815	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS01820	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS01825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01830	SSF101386	all-alpha NTP pyrophosphatases
RPE_RS01835	SSF51366	Ribulose-phoshate binding barrel
RPE_RS01840	SSF51366	Ribulose-phoshate binding barrel
RPE_RS01845	SSF52317	Class I glutamine amidotransferase-like
RPE_RS01855	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS01860	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS01865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01870	SSF160443	SMR domain-like
RPE_RS01875	SSF50685	Barwin-like endoglucanases
RPE_RS01880	SSF54427	NTF2-like
RPE_RS01885	SSF54611	SecB-like
RPE_RS01890	SSF53098	Ribonuclease H-like
RPE_RS01895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01900	SSF52972	ITPase-like
RPE_RS01915	SSF50249	Nucleic acid-binding proteins
RPE_RS01915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01915	SSF68912	Rho N-terminal domain-like
RPE_RS01920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01925	SSF51905	FAD/NAD(P)-binding domain
RPE_RS01930	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS01935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01940	SSF110849	ParB/Sulfiredoxin
RPE_RS01945	SSF48019	post-AAA+ oligomerization domain-like
RPE_RS01945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS01955	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_RS01955	SSF50677	ValRS/IleRS/LeuRS editing domain
RPE_RS01955	SSF52374	Nucleotidylyl transferase
RPE_RS01960	SSF158472	HAMP domain-like
RPE_RS01960	SSF55073	Nucleotide cyclase
RPE_RS01965	SSF51419	PLP-binding barrel
RPE_RS01970	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS01975	SSF52172	CheY-like
RPE_RS01980	SSF51206	cAMP-binding domain-like
RPE_RS01985	SSF56219	DNase I-like
RPE_RS01990	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
RPE_RS01995	SSF46785	"Winged helix" DNA-binding domain
RPE_RS01995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02000	SSF53383	PLP-dependent transferases
RPE_RS02010	SSF81301	Nucleotidyltransferase
RPE_RS02015	SSF111352	Ammonium transporter
RPE_RS02020	SSF54913	GlnB-like
RPE_RS02025	SSF111352	Ammonium transporter
RPE_RS02030	SSF54913	GlnB-like
RPE_RS02035	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS02040	SSF51905	FAD/NAD(P)-binding domain
RPE_RS02045	SSF158997	Trm112p-like
RPE_RS02050	SSF88697	PUA domain-like
RPE_RS02055	SSF48452	TPR-like
RPE_RS02055	SSF52833	Thioredoxin-like
RPE_RS02065	SSF158472	HAMP domain-like
RPE_RS02075	SSF51197	Clavaminate synthase-like
RPE_RS02080	SSF53067	Actin-like ATPase domain
RPE_RS02085	SSF158832	Tex N-terminal region-like
RPE_RS02085	SSF47781	RuvA domain 2-like
RPE_RS02085	SSF50249	Nucleic acid-binding proteins
RPE_RS02085	SSF53098	Ribonuclease H-like
RPE_RS02090	SSF56784	HAD-like
RPE_RS02095	SSF53474	alpha/beta-Hydrolases
RPE_RS02105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02120	SSF51649	RuBisCo, C-terminal domain
RPE_RS02120	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPE_RS02125	SSF111038	YjbQ-like
RPE_RS02130	SSF54427	NTF2-like
RPE_RS02135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02140	SSF53098	Ribonuclease H-like
RPE_RS02155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02165	SSF69754	Ribosome binding protein Y (YfiA homologue)
RPE_RS02170	SSF55804	Phoshotransferase/anion transport protein
RPE_RS02185	SSF49764	HSP20-like chaperones
RPE_RS02190	SSF50331	MOP-like
RPE_RS02190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02195	SSF161098	MetI-like
RPE_RS02200	SSF161098	MetI-like
RPE_RS02205	SSF52980	Restriction endonuclease-like
RPE_RS02210	SSF53850	Periplasmic binding protein-like II
RPE_RS02215	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_RS02230	SSF55205	EPT/RTPC-like
RPE_RS02240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02255	SSF50249	Nucleic acid-binding proteins
RPE_RS02260	SSF52096	ClpP/crotonase
RPE_RS02265	SSF47729	IHF-like DNA-binding proteins
RPE_RS02275	SSF51366	Ribulose-phoshate binding barrel
RPE_RS02280	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS02285	SSF51366	Ribulose-phoshate binding barrel
RPE_RS02290	SSF52096	ClpP/crotonase
RPE_RS02295	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_RS02295	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_RS02300	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS02305	SSF52833	Thioredoxin-like
RPE_RS02310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02310	SSF52980	Restriction endonuclease-like
RPE_RS02315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02320	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS02325	SSF141371	PilZ domain-like
RPE_RS02330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02330	SSF56112	Protein kinase-like (PK-like)
RPE_RS02335	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS02335	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS02335	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS02340	SSF51283	dUTPase-like
RPE_RS02345	SSF102645	CoaB-like
RPE_RS02345	SSF47598	Ribbon-helix-helix
RPE_RS02345	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPE_RS02355	SSF56112	Protein kinase-like (PK-like)
RPE_RS02360	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS02365	SSF46946	S13-like H2TH domain
RPE_RS02365	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_RS02365	SSF81624	N-terminal domain of MutM-like DNA repair proteins
RPE_RS02370	SSF56801	Acetyl-CoA synthetase-like
RPE_RS02375	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS02380	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS02380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02385	SSF82153	FAS1 domain
RPE_RS02390	SSF81342	Transmembrane di-heme cytochromes
RPE_RS02395	SSF56524	Oxidoreductase molybdopterin-binding domain
RPE_RS02400	SSF103473	MFS general substrate transporter
RPE_RS02405	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_RS02410	SSF143422	Transposase IS200-like
RPE_RS02425	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS02425	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS02435	SSF46689	Homeodomain-like
RPE_RS02435	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPE_RS02435	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPE_RS02445	SSF48150	DNA-glycosylase
RPE_RS02455	SSF54001	Cysteine proteinases
RPE_RS02460	SSF51905	FAD/NAD(P)-binding domain
RPE_RS02460	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS02470	SSF46955	Putative DNA-binding domain
RPE_RS02470	SSF50249	Nucleic acid-binding proteins
RPE_RS02470	SSF54991	Anticodon-binding domain of PheRS
RPE_RS02470	SSF55681	Class II aaRS and biotin synthetases
RPE_RS02470	SSF56037	PheT/TilS domain
RPE_RS02485	SSF46589	tRNA-binding arm
RPE_RS02485	SSF55681	Class II aaRS and biotin synthetases
RPE_RS02490	SSF74731	Ribosomal protein L20
RPE_RS02495	SSF143034	L35p-like
RPE_RS02510	SSF54364	Translation initiation factor IF3, N-terminal domain
RPE_RS02510	SSF55200	Translation initiation factor IF3, C-terminal domain
RPE_RS02515	SSF53474	alpha/beta-Hydrolases
RPE_RS02520	SSF48371	ARM repeat
RPE_RS02520	SSF54862	4Fe-4S ferredoxins
RPE_RS02525	SSF47616	GST C-terminal domain-like
RPE_RS02525	SSF52833	Thioredoxin-like
RPE_RS02535	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS02545	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS02550	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS02555	SSF158472	HAMP domain-like
RPE_RS02555	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS02560	SSF160240	Cation efflux protein cytoplasmic domain-like
RPE_RS02560	SSF161111	Cation efflux protein transmembrane domain-like
RPE_RS02565	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPE_RS02570	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
RPE_RS02575	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPE_RS02575	SSF51905	FAD/NAD(P)-binding domain
RPE_RS02575	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPE_RS02580	SSF46548	alpha-helical ferredoxin
RPE_RS02580	SSF54292	2Fe-2S ferredoxin-like
RPE_RS02585	SSF50475	FMN-binding split barrel
RPE_RS02605	SSF161084	MAPEG domain-like
RPE_RS02610	SSF159245	AttH-like
RPE_RS02620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02625	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS02645	SSF56935	Porins
RPE_RS02650	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_RS02655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02660	SSF53807	"Helical backbone" metal receptor
RPE_RS02665	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS02670	SSF103473	MFS general substrate transporter
RPE_RS02675	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS02675	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS02685	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS02685	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS02690	SSF53850	Periplasmic binding protein-like II
RPE_RS02695	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS02710	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS02710	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS02715	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS02715	SSF52172	CheY-like
RPE_RS02720	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS02720	SSF52172	CheY-like
RPE_RS02720	SSF55781	GAF domain-like
RPE_RS02720	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS02725	SSF158472	HAMP domain-like
RPE_RS02725	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS02730	SSF53850	Periplasmic binding protein-like II
RPE_RS02740	SSF53822	Periplasmic binding protein-like I
RPE_RS02745	SSF51182	RmlC-like cupins
RPE_RS02750	SSF56104	SAICAR synthase-like
RPE_RS02755	SSF53633	Carbamate kinase-like
RPE_RS02755	SSF88697	PUA domain-like
RPE_RS02760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02760	SSF82051	Obg GTP-binding protein N-terminal domain
RPE_RS02765	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS02775	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS02780	SSF110324	Ribosomal L27 protein-like
RPE_RS02785	SSF141091	L21p-like
RPE_RS02790	SSF53067	Actin-like ATPase domain
RPE_RS02800	SSF56349	DNA breaking-rejoining enzymes
RPE_RS02805	SSF46785	"Winged helix" DNA-binding domain
RPE_RS02810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02815	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS02820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02870	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS02890	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS02895	SSF56801	Acetyl-CoA synthetase-like
RPE_RS02900	SSF47336	ACP-like
RPE_RS02905	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS02905	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS02915	SSF47240	Ferritin-like
RPE_RS02920	SSF52096	ClpP/crotonase
RPE_RS02925	SSF53474	alpha/beta-Hydrolases
RPE_RS02930	SSF50129	GroES-like
RPE_RS02930	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS02935	SSF46785	"Winged helix" DNA-binding domain
RPE_RS02935	SSF51206	cAMP-binding domain-like
RPE_RS02940	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPE_RS02940	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS02945	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_RS02945	SSF56003	Molybdenum cofactor-binding domain
RPE_RS02950	SSF47741	CO dehydrogenase ISP C-domain like
RPE_RS02950	SSF54292	2Fe-2S ferredoxin-like
RPE_RS02955	SSF56801	Acetyl-CoA synthetase-like
RPE_RS02960	SSF53822	Periplasmic binding protein-like I
RPE_RS02970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS02980	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS02985	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS02990	SSF46785	"Winged helix" DNA-binding domain
RPE_RS02995	SSF47240	Ferritin-like
RPE_RS03000	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS03005	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS03005	SSF52922	TK C-terminal domain-like
RPE_RS03005	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_RS03010	SSF54862	4Fe-4S ferredoxins
RPE_RS03015	SSF56801	Acetyl-CoA synthetase-like
RPE_RS03020	SSF53067	Actin-like ATPase domain
RPE_RS03025	SSF53067	Actin-like ATPase domain
RPE_RS03040	SSF50129	GroES-like
RPE_RS03040	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS03045	SSF46785	"Winged helix" DNA-binding domain
RPE_RS03050	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS03055	SSF52096	ClpP/crotonase
RPE_RS03060	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS03060	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS03065	SSF56801	Acetyl-CoA synthetase-like
RPE_RS03070	SSF52096	ClpP/crotonase
RPE_RS03075	SSF53187	Zn-dependent exopeptidases
RPE_RS03080	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS03085	SSF53300	vWA-like
RPE_RS03095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS03100	SSF81442	Cytochrome c oxidase subunit I-like
RPE_RS03105	SSF46626	Cytochrome c
RPE_RS03115	SSF81452	Cytochrome c oxidase subunit III-like
RPE_RS03125	SSF56918	Light-harvesting complex subunits
RPE_RS03130	SSF56918	Light-harvesting complex subunits
RPE_RS03135	SSF56918	Light-harvesting complex subunits
RPE_RS03140	SSF56918	Light-harvesting complex subunits
RPE_RS03145	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS03145	SSF52172	CheY-like
RPE_RS03150	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS03150	SSF55781	GAF domain-like
RPE_RS03150	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS03150	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS03155	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS03155	SSF55781	GAF domain-like
RPE_RS03155	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS03155	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS03160	SSF52172	CheY-like
RPE_RS03165	SSF52172	CheY-like
RPE_RS03165	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS03170	SSF51230	Single hybrid motif
RPE_RS03170	SSF51246	Rudiment single hybrid motif
RPE_RS03170	SSF51569	Aldolase
RPE_RS03170	SSF52440	PreATP-grasp domain
RPE_RS03170	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS03170	SSF89000	post-HMGL domain-like
RPE_RS03175	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPE_RS03185	SSF102114	Radical SAM enzymes
RPE_RS03210	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS03215	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS03225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS03235	SSF53633	Carbamate kinase-like
RPE_RS03240	SSF47090	PGBD-like
RPE_RS03245	SSF56784	HAD-like
RPE_RS03250	SSF82771	GIY-YIG endonuclease
RPE_RS03255	SSF51161	Trimeric LpxA-like enzymes
RPE_RS03265	SSF53187	Zn-dependent exopeptidases
RPE_RS03265	SSF55031	Bacterial exopeptidase dimerisation domain
RPE_RS03270	SSF55120	Pseudouridine synthase
RPE_RS03275	SSF50486	FMT C-terminal domain-like
RPE_RS03275	SSF53328	Formyltransferase
RPE_RS03280	SSF56420	Peptide deformylase
RPE_RS03290	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS03305	SSF103088	OmpA-like
RPE_RS03310	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS03320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS03320	SSF90123	ABC transporter transmembrane region
RPE_RS03325	SSF143800	L28p-like
RPE_RS03340	SSF50129	GroES-like
RPE_RS03340	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS03345	SSF141868	EAL domain-like
RPE_RS03345	SSF55073	Nucleotide cyclase
RPE_RS03345	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS03350	SSF46785	"Winged helix" DNA-binding domain
RPE_RS03355	SSF54427	NTF2-like
RPE_RS03360	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS03360	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS03365	SSF53901	Thiolase-like
RPE_RS03370	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS03370	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS03370	SSF52096	ClpP/crotonase
RPE_RS03375	SSF47616	GST C-terminal domain-like
RPE_RS03375	SSF52833	Thioredoxin-like
RPE_RS03380	SSF46785	"Winged helix" DNA-binding domain
RPE_RS03385	SSF55931	Glutamine synthetase/guanido kinase
RPE_RS03395	SSF53098	Ribonuclease H-like
RPE_RS03410	SSF46548	alpha-helical ferredoxin
RPE_RS03410	SSF51971	Nucleotide-binding domain
RPE_RS03415	SSF51395	FMN-linked oxidoreductases
RPE_RS03415	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS03415	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
RPE_RS03425	SSF49764	HSP20-like chaperones
RPE_RS03430	SSF53474	alpha/beta-Hydrolases
RPE_RS03435	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS03440	SSF55073	Nucleotide cyclase
RPE_RS03475	SSF53697	SIS domain
RPE_RS03480	SSF103473	MFS general substrate transporter
RPE_RS03485	SSF52266	SGNH hydrolase
RPE_RS03490	SSF140931	Fic-like
RPE_RS03500	SSF47090	PGBD-like
RPE_RS03500	SSF53955	Lysozyme-like
RPE_RS03515	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS03520	SSF46689	Homeodomain-like
RPE_RS03525	SSF56655	Carbohydrate phosphatase
RPE_RS03530	SSF53187	Zn-dependent exopeptidases
RPE_RS03535	SSF52172	CheY-like
RPE_RS03550	SSF52218	Flavoproteins
RPE_RS03555	SSF51182	RmlC-like cupins
RPE_RS03560	SSF46785	"Winged helix" DNA-binding domain
RPE_RS03560	SSF53850	Periplasmic binding protein-like II
RPE_RS03570	SSF143456	VC0467-like
RPE_RS03575	SSF81901	HCP-like
RPE_RS03590	SSF51069	Carbonic anhydrase
RPE_RS03595	SSF51306	LexA/Signal peptidase
RPE_RS03600	SSF56399	ADP-ribosylation
RPE_RS03605	SSF51395	FMN-linked oxidoreductases
RPE_RS03610	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS03625	SSF50249	Nucleic acid-binding proteins
RPE_RS03625	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPE_RS03630	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS03635	SSF48452	TPR-like
RPE_RS03635	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS03640	SSF56925	OMPA-like
RPE_RS03650	SSF53822	Periplasmic binding protein-like I
RPE_RS03655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS03660	SSF56300	Metallo-dependent phosphatases
RPE_RS03665	SSF46785	"Winged helix" DNA-binding domain
RPE_RS03665	SSF53850	Periplasmic binding protein-like II
RPE_RS03670	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS03675	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS03685	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPE_RS03685	SSF52374	Nucleotidylyl transferase
RPE_RS03690	SSF53850	Periplasmic binding protein-like II
RPE_RS03695	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS03700	SSF52833	Thioredoxin-like
RPE_RS03705	SSF52096	ClpP/crotonase
RPE_RS03715	SSF53901	Thiolase-like
RPE_RS03725	SSF46785	"Winged helix" DNA-binding domain
RPE_RS03725	SSF53850	Periplasmic binding protein-like II
RPE_RS03730	SSF54506	Diaminopimelate epimerase-like
RPE_RS03735	SSF51556	Metallo-dependent hydrolases
RPE_RS03740	SSF89562	RraA-like
RPE_RS03745	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS03745	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS03750	SSF51556	Metallo-dependent hydrolases
RPE_RS03755	SSF48076	LigA subunit of an aromatic-ring-opening dioxygenase LigAB
RPE_RS03760	SSF53213	LigB-like
RPE_RS03765	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS03765	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS03775	SSF101386	all-alpha NTP pyrophosphatases
RPE_RS03790	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPE_RS03795	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS03810	SSF52743	Subtilisin-like
RPE_RS03815	SSF50331	MOP-like
RPE_RS03815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS03820	SSF161098	MetI-like
RPE_RS03825	SSF53850	Periplasmic binding protein-like II
RPE_RS03830	SSF46785	"Winged helix" DNA-binding domain
RPE_RS03830	SSF50331	MOP-like
RPE_RS03835	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS03835	SSF52922	TK C-terminal domain-like
RPE_RS03835	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_RS03835	SSF54862	4Fe-4S ferredoxins
RPE_RS03840	SSF46548	alpha-helical ferredoxin
RPE_RS03840	SSF51971	Nucleotide-binding domain
RPE_RS03840	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_RS03840	SSF63380	Riboflavin synthase domain-like
RPE_RS03850	SSF53613	Ribokinase-like
RPE_RS03855	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS03860	SSF51905	FAD/NAD(P)-binding domain
RPE_RS03860	SSF53474	alpha/beta-Hydrolases
RPE_RS03890	SSF64518	Phase 1 flagellin
RPE_RS03895	SSF64518	Phase 1 flagellin
RPE_RS03910	SSF117143	Flagellar hook protein flgE
RPE_RS03925	SSF101116	Flagellar export chaperone FliS
RPE_RS03935	SSF64518	Phase 1 flagellin
RPE_RS03940	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS03940	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS03955	SSF158442	DsbB-like
RPE_RS03975	SSF52833	Thioredoxin-like
RPE_RS03995	SSF51182	RmlC-like cupins
RPE_RS04000	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS04000	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS04005	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_RS04025	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS04030	SSF51161	Trimeric LpxA-like enzymes
RPE_RS04030	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS04035	SSF54631	CBS-domain pair
RPE_RS04040	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS04045	SSF53474	alpha/beta-Hydrolases
RPE_RS04050	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS04055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS04060	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS04065	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS04070	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS04075	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS04085	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS04090	SSF51445	(Trans)glycosidases
RPE_RS04110	SSF55120	Pseudouridine synthase
RPE_RS04110	SSF55174	Alpha-L RNA-binding motif
RPE_RS04115	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS04115	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS04120	SSF53795	PEP carboxykinase-like
RPE_RS04120	SSF68923	PEP carboxykinase N-terminal domain
RPE_RS04125	SSF50475	FMN-binding split barrel
RPE_RS04130	SSF52172	CheY-like
RPE_RS04135	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS04135	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS04140	SSF53795	PEP carboxykinase-like
RPE_RS04145	SSF53062	PTS system fructose IIA component-like
RPE_RS04150	SSF55594	HPr-like
RPE_RS04160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS04160	SSF54980	EF-G C-terminal domain-like
RPE_RS04175	SSF53474	alpha/beta-Hydrolases
RPE_RS04180	SSF48695	Multiheme cytochromes
RPE_RS04185	SSF56935	Porins
RPE_RS04190	SSF57652	HIPIP (high potential iron protein)
RPE_RS04195	SSF56925	OMPA-like
RPE_RS04200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS04205	SSF101478	ADP-ribosylglycohydrolase
RPE_RS04215	SSF52317	Class I glutamine amidotransferase-like
RPE_RS04240	SSF102114	Radical SAM enzymes
RPE_RS04250	SSF48613	Heme oxygenase-like
RPE_RS04255	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS04265	SSF56801	Acetyl-CoA synthetase-like
RPE_RS04270	SSF53822	Periplasmic binding protein-like I
RPE_RS04275	SSF81296	E set domains
RPE_RS04280	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS04285	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPE_RS04290	SSF46626	Cytochrome c
RPE_RS04295	SSF53850	Periplasmic binding protein-like II
RPE_RS04300	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_RS04315	SSF51905	FAD/NAD(P)-binding domain
RPE_RS04330	SSF48592	GroEL equatorial domain-like
RPE_RS04330	SSF52029	GroEL apical domain-like
RPE_RS04330	SSF54849	GroEL-intermediate domain like
RPE_RS04335	SSF50129	GroES-like
RPE_RS04345	SSF103473	MFS general substrate transporter
RPE_RS04350	SSF75708	Chemotaxis phosphatase CheZ
RPE_RS04355	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS04375	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS04380	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS04385	SSF53850	Periplasmic binding protein-like II
RPE_RS04390	SSF55681	Class II aaRS and biotin synthetases
RPE_RS04395	SSF75217	alpha/beta knot
RPE_RS04395	SSF88697	PUA domain-like
RPE_RS04420	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
RPE_RS04425	SSF56655	Carbohydrate phosphatase
RPE_RS04435	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS04440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS04455	SSF53850	Periplasmic binding protein-like II
RPE_RS04465	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS04470	SSF90123	ABC transporter transmembrane region
RPE_RS04480	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS04480	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS04485	SSF46626	Cytochrome c
RPE_RS04495	SSF141868	EAL domain-like
RPE_RS04495	SSF55073	Nucleotide cyclase
RPE_RS04495	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS04500	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS04505	SSF55073	Nucleotide cyclase
RPE_RS04510	SSF48264	Cytochrome P450
RPE_RS04520	SSF53383	PLP-dependent transferases
RPE_RS04525	SSF50199	Staphylococcal nuclease
RPE_RS04535	SSF52129	Caspase-like
RPE_RS04540	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS04545	SSF74650	Galactose mutarotase-like
RPE_RS04545	SSF81296	E set domains
RPE_RS04550	SSF51230	Single hybrid motif
RPE_RS04560	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS04560	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS04560	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS04565	SSF51230	Single hybrid motif
RPE_RS04570	SSF103088	OmpA-like
RPE_RS04575	SSF48452	TPR-like
RPE_RS04575	SSF52129	Caspase-like
RPE_RS04580	SSF51905	FAD/NAD(P)-binding domain
RPE_RS04590	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS04595	SSF51182	RmlC-like cupins
RPE_RS04600	SSF56529	FAH
RPE_RS04600	SSF63433	Fumarylacetoacetate hydrolase, FAH, N-terminal domain
RPE_RS04605	SSF52954	Class II aaRS ABD-related
RPE_RS04605	SSF55681	Class II aaRS and biotin synthetases
RPE_RS04610	SSF53383	PLP-dependent transferases
RPE_RS04615	SSF141868	EAL domain-like
RPE_RS04620	SSF56784	HAD-like
RPE_RS04635	SSF52172	CheY-like
RPE_RS04640	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS04645	SSF50249	Nucleic acid-binding proteins
RPE_RS04650	SSF56925	OMPA-like
RPE_RS04655	SSF46600	C-terminal UvrC-binding domain of UvrB
RPE_RS04655	SSF47781	RuvA domain 2-like
RPE_RS04655	SSF82771	GIY-YIG endonuclease
RPE_RS04665	SSF54285	MoaD/ThiS
RPE_RS04670	SSF54690	Molybdopterin synthase subunit MoaE
RPE_RS04675	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS04680	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS04685	SSF55120	Pseudouridine synthase
RPE_RS04685	SSF55174	Alpha-L RNA-binding motif
RPE_RS04690	SSF53927	Cytidine deaminase-like
RPE_RS04700	SSF46785	"Winged helix" DNA-binding domain
RPE_RS04705	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_RS04710	SSF55331	Tautomerase/MIF
RPE_RS04715	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS04720	SSF52317	Class I glutamine amidotransferase-like
RPE_RS04725	SSF52317	Class I glutamine amidotransferase-like
RPE_RS04735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS04745	SSF55811	Nudix
RPE_RS04755	SSF81301	Nucleotidyltransferase
RPE_RS04755	SSF81891	Poly A polymerase C-terminal region-like
RPE_RS04765	SSF102114	Radical SAM enzymes
RPE_RS04770	SSF75217	alpha/beta knot
RPE_RS04775	SSF50022	ISP domain
RPE_RS04780	SSF46626	Cytochrome c
RPE_RS04780	SSF81342	Transmembrane di-heme cytochromes
RPE_RS04780	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
RPE_RS04785	SSF53474	alpha/beta-Hydrolases
RPE_RS04815	SSF143243	Nqo5-like
RPE_RS04815	SSF56762	HydB/Nqo4-like
RPE_RS04820	SSF56770	HydA/Nqo6-like
RPE_RS04825	SSF103515	Autotransporter
RPE_RS04825	SSF52266	SGNH hydrolase
RPE_RS04845	SSF74653	TolA/TonB C-terminal domain
RPE_RS04850	SSF48295	TrpR-like
RPE_RS04860	SSF48029	FliG
RPE_RS04870	SSF101801	Surface presentation of antigens (SPOA)
RPE_RS04875	SSF46689	Homeodomain-like
RPE_RS04875	SSF52172	CheY-like
RPE_RS04875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS04885	SSF160272	Shew3726-like
RPE_RS04900	SSF54001	Cysteine proteinases
RPE_RS04905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS04910	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS04915	SSF47240	Ferritin-like
RPE_RS04920	SSF51182	RmlC-like cupins
RPE_RS04925	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
RPE_RS04925	SSF52317	Class I glutamine amidotransferase-like
RPE_RS04930	SSF89095	GatB/YqeY motif
RPE_RS04935	SSF56801	Acetyl-CoA synthetase-like
RPE_RS04940	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_RS04945	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS04950	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS04950	SSF52922	TK C-terminal domain-like
RPE_RS04955	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_RS04955	SSF54862	4Fe-4S ferredoxins
RPE_RS04960	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS04960	SSF52922	TK C-terminal domain-like
RPE_RS04960	SSF54862	4Fe-4S ferredoxins
RPE_RS04965	SSF46785	"Winged helix" DNA-binding domain
RPE_RS04970	SSF47240	Ferritin-like
RPE_RS04980	SSF47240	Ferritin-like
RPE_RS04985	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_RS04990	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_RS04990	SSF54292	2Fe-2S ferredoxin-like
RPE_RS04990	SSF63380	Riboflavin synthase domain-like
RPE_RS04995	SSF54909	Dimeric alpha+beta barrel
RPE_RS05000	SSF53720	ALDH-like
RPE_RS05000	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS05005	SSF46689	Homeodomain-like
RPE_RS05005	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS05010	SSF56801	Acetyl-CoA synthetase-like
RPE_RS05015	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS05020	SSF52096	ClpP/crotonase
RPE_RS05025	SSF53822	Periplasmic binding protein-like I
RPE_RS05040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05050	SSF56784	HAD-like
RPE_RS05055	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS05055	SSF52172	CheY-like
RPE_RS05060	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS05065	SSF48113	Heme-dependent peroxidases
RPE_RS05065	SSF51120	beta-Roll
RPE_RS05070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05070	SSF90123	ABC transporter transmembrane region
RPE_RS05075	SSF51120	beta-Roll
RPE_RS05080	SSF111369	HlyD-like secretion proteins
RPE_RS05095	SSF48295	TrpR-like
RPE_RS05125	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS05145	SSF48371	ARM repeat
RPE_RS05145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05245	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS05250	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS05265	SSF53955	Lysozyme-like
RPE_RS05285	SSF51182	RmlC-like cupins
RPE_RS05290	SSF46626	Cytochrome c
RPE_RS05295	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPE_RS05330	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS05330	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS05335	SSF56731	DNA primase core
RPE_RS05335	SSF57783	Zinc beta-ribbon
RPE_RS05345	SSF110857	Gamma-glutamyl cyclotransferase-like
RPE_RS05350	SSF53187	Zn-dependent exopeptidases
RPE_RS05355	SSF54736	ClpS-like
RPE_RS05360	SSF53300	vWA-like
RPE_RS05365	SSF50249	Nucleic acid-binding proteins
RPE_RS05365	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS05375	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS05375	SSF55174	Alpha-L RNA-binding motif
RPE_RS05380	SSF52309	N-(deoxy)ribosyltransferase-like
RPE_RS05390	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS05390	SSF52922	TK C-terminal domain-like
RPE_RS05395	SSF116842	XseB-like
RPE_RS05400	SSF52768	Arginase/deacetylase
RPE_RS05405	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RPE_RS05405	SSF56300	Metallo-dependent phosphatases
RPE_RS05410	SSF47175	Cytochromes
RPE_RS05415	SSF53474	alpha/beta-Hydrolases
RPE_RS05420	SSF52096	ClpP/crotonase
RPE_RS05425	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS05425	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS05440	SSF56349	DNA breaking-rejoining enzymes
RPE_RS05450	SSF53041	Resolvase-like
RPE_RS05470	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS05475	SSF56300	Metallo-dependent phosphatases
RPE_RS05480	SSF54001	Cysteine proteinases
RPE_RS05485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05485	SSF90123	ABC transporter transmembrane region
RPE_RS05500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05530	SSF48452	TPR-like
RPE_RS05540	SSF52091	SpoIIaa-like
RPE_RS05545	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS05550	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS05565	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS05570	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS05575	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS05605	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
RPE_RS05625	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS05650	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS05650	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS05650	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPE_RS05665	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS05670	SSF141371	PilZ domain-like
RPE_RS05690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05705	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS05705	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS05720	SSF48295	TrpR-like
RPE_RS05725	SSF48295	TrpR-like
RPE_RS05790	SSF48295	TrpR-like
RPE_RS05800	SSF47598	Ribbon-helix-helix
RPE_RS05805	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS05810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS05815	SSF117143	Flagellar hook protein flgE
RPE_RS05820	SSF158837	AGR C 984p-like
RPE_RS05830	SSF101801	Surface presentation of antigens (SPOA)
RPE_RS05830	SSF103039	CheC-like
RPE_RS05840	SSF101801	Surface presentation of antigens (SPOA)
RPE_RS05845	SSF48029	FliG
RPE_RS05850	SSF160544	EscU C-terminal domain-like
RPE_RS05870	SSF117143	Flagellar hook protein flgE
RPE_RS05885	SSF158791	MgtE N-terminal domain-like
RPE_RS05905	SSF64518	Phase 1 flagellin
RPE_RS05920	SSF103088	OmpA-like
RPE_RS05935	SSF53955	Lysozyme-like
RPE_RS05940	SSF117143	Flagellar hook protein flgE
RPE_RS05945	SSF64518	Phase 1 flagellin
RPE_RS05950	SSF64518	Phase 1 flagellin
RPE_RS06005	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS06005	SSF52172	CheY-like
RPE_RS06020	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS06025	SSF48208	Six-hairpin glycosidases
RPE_RS06030	SSF103473	MFS general substrate transporter
RPE_RS06035	SSF52091	SpoIIaa-like
RPE_RS06040	SSF52172	CheY-like
RPE_RS06045	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS06045	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS06045	SSF50341	CheW-like
RPE_RS06045	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS06050	SSF50341	CheW-like
RPE_RS06055	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS06055	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS06060	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_RS06060	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS06065	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RPE_RS06070	SSF52172	CheY-like
RPE_RS06070	SSF52738	Methylesterase CheB, C-terminal domain
RPE_RS06075	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS06080	SSF52091	SpoIIaa-like
RPE_RS06085	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS06090	SSF52172	CheY-like
RPE_RS06095	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS06100	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS06100	SSF52172	CheY-like
RPE_RS06100	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS06100	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS06110	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_RS06115	SSF50022	ISP domain
RPE_RS06120	SSF53146	Nitrogenase accessory factor-like
RPE_RS06130	SSF53300	vWA-like
RPE_RS06135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06145	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS06145	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS06150	SSF53850	Periplasmic binding protein-like II
RPE_RS06155	SSF161098	MetI-like
RPE_RS06160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06175	SSF160467	PH0987 N-terminal domain-like
RPE_RS06175	SSF50891	Cyclophilin-like
RPE_RS06175	SSF51230	Single hybrid motif
RPE_RS06175	SSF51246	Rudiment single hybrid motif
RPE_RS06175	SSF52440	PreATP-grasp domain
RPE_RS06175	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS06180	SSF75304	Amidase signature (AS) enzymes
RPE_RS06190	SSF46689	Homeodomain-like
RPE_RS06190	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS06200	SSF111369	HlyD-like secretion proteins
RPE_RS06205	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS06205	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS06205	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS06210	SSF54909	Dimeric alpha+beta barrel
RPE_RS06215	SSF56796	Dehydroquinate synthase-like
RPE_RS06220	SSF56770	HydA/Nqo6-like
RPE_RS06225	SSF56762	HydB/Nqo4-like
RPE_RS06230	SSF56770	HydA/Nqo6-like
RPE_RS06235	SSF56762	HydB/Nqo4-like
RPE_RS06240	SSF81342	Transmembrane di-heme cytochromes
RPE_RS06245	SSF53163	HybD-like
RPE_RS06250	SSF159127	HupF/HypC-like
RPE_RS06255	SSF52833	Thioredoxin-like
RPE_RS06265	SSF57802	Rubredoxin-like
RPE_RS06275	SSF56762	HydB/Nqo4-like
RPE_RS06285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06290	SSF54975	Acylphosphatase/BLUF domain-like
RPE_RS06290	SSF55821	YrdC/RibB
RPE_RS06295	SSF159127	HupF/HypC-like
RPE_RS06305	SSF55326	PurM N-terminal domain-like
RPE_RS06305	SSF56042	PurM C-terminal domain-like
RPE_RS06310	SSF46689	Homeodomain-like
RPE_RS06310	SSF52172	CheY-like
RPE_RS06310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06315	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS06315	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS06315	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS06320	SSF56300	Metallo-dependent phosphatases
RPE_RS06325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06335	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS06335	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS06340	SSF46785	"Winged helix" DNA-binding domain
RPE_RS06340	SSF54909	Dimeric alpha+beta barrel
RPE_RS06345	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_RS06360	SSF50692	ADC-like
RPE_RS06360	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_RS06365	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_RS06365	SSF63380	Riboflavin synthase domain-like
RPE_RS06370	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
RPE_RS06370	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RPE_RS06375	SSF51905	FAD/NAD(P)-binding domain
RPE_RS06380	SSF46458	Globin-like
RPE_RS06385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06390	SSF161098	MetI-like
RPE_RS06395	SSF53850	Periplasmic binding protein-like II
RPE_RS06400	SSF53850	Periplasmic binding protein-like II
RPE_RS06405	SSF52172	CheY-like
RPE_RS06425	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS06430	SSF51445	(Trans)glycosidases
RPE_RS06430	SSF81296	E set domains
RPE_RS06435	SSF51011	Glycosyl hydrolase domain
RPE_RS06435	SSF51445	(Trans)glycosidases
RPE_RS06435	SSF81296	E set domains
RPE_RS06440	SSF52172	CheY-like
RPE_RS06445	SSF53474	alpha/beta-Hydrolases
RPE_RS06455	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS06470	SSF53738	Phosphoglucomutase, first 3 domains
RPE_RS06470	SSF55957	Phosphoglucomutase, C-terminal domain
RPE_RS06475	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS06475	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RPE_RS06515	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS06515	SSF52172	CheY-like
RPE_RS06520	SSF56918	Light-harvesting complex subunits
RPE_RS06525	SSF56918	Light-harvesting complex subunits
RPE_RS06530	SSF103473	MFS general substrate transporter
RPE_RS06545	SSF51905	FAD/NAD(P)-binding domain
RPE_RS06570	SSF49785	Galactose-binding domain-like
RPE_RS06575	SSF53474	alpha/beta-Hydrolases
RPE_RS06585	SSF53850	Periplasmic binding protein-like II
RPE_RS06585	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
RPE_RS06590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06595	SSF53300	vWA-like
RPE_RS06605	SSF46689	Homeodomain-like
RPE_RS06605	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS06610	SSF158472	HAMP domain-like
RPE_RS06610	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS06620	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS06625	SSF51726	UROD/MetE-like
RPE_RS06630	SSF53474	alpha/beta-Hydrolases
RPE_RS06635	SSF53474	alpha/beta-Hydrolases
RPE_RS06640	SSF51905	FAD/NAD(P)-binding domain
RPE_RS06645	SSF48576	Terpenoid synthases
RPE_RS06650	SSF102886	Coproporphyrinogen III oxidase
RPE_RS06655	SSF159245	AttH-like
RPE_RS06665	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS06670	SSF51905	FAD/NAD(P)-binding domain
RPE_RS06675	SSF48576	Terpenoid synthases
RPE_RS06680	SSF46785	"Winged helix" DNA-binding domain
RPE_RS06680	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS06685	SSF50129	GroES-like
RPE_RS06685	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS06690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06695	SSF53807	"Helical backbone" metal receptor
RPE_RS06700	SSF53807	"Helical backbone" metal receptor
RPE_RS06705	SSF56918	Light-harvesting complex subunits
RPE_RS06710	SSF56918	Light-harvesting complex subunits
RPE_RS06715	SSF81483	Bacterial photosystem II reaction centre, L and M subunits
RPE_RS06720	SSF81483	Bacterial photosystem II reaction centre, L and M subunits
RPE_RS06725	SSF46689	Homeodomain-like
RPE_RS06725	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS06735	SSF103473	MFS general substrate transporter
RPE_RS06740	SSF51905	FAD/NAD(P)-binding domain
RPE_RS06755	SSF46626	Cytochrome c
RPE_RS06760	SSF46689	Homeodomain-like
RPE_RS06760	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS06765	SSF55781	GAF domain-like
RPE_RS06765	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS06770	SSF48613	Heme oxygenase-like
RPE_RS06775	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_RS06785	SSF53807	"Helical backbone" metal receptor
RPE_RS06790	SSF53807	"Helical backbone" metal receptor
RPE_RS06800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06805	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS06810	SSF103473	MFS general substrate transporter
RPE_RS06815	SSF50346	PRC-barrel domain
RPE_RS06815	SSF81490	Photosystem II reaction centre subunit H, transmembrane region
RPE_RS06835	SSF47240	Ferritin-like
RPE_RS06845	SSF53383	PLP-dependent transferases
RPE_RS06850	SSF46785	"Winged helix" DNA-binding domain
RPE_RS06850	SSF53850	Periplasmic binding protein-like II
RPE_RS06855	SSF51649	RuBisCo, C-terminal domain
RPE_RS06855	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPE_RS06860	SSF55239	RuBisCO, small subunit
RPE_RS06865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06870	SSF53474	alpha/beta-Hydrolases
RPE_RS06875	SSF53383	PLP-dependent transferases
RPE_RS06880	SSF50993	Peptidase/esterase 'gauge' domain
RPE_RS06880	SSF53474	alpha/beta-Hydrolases
RPE_RS06885	SSF144266	MPN010-like
RPE_RS06890	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS06895	SSF69047	Hypothetical protein YjbJ
RPE_RS06900	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS06900	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS06900	SSF52172	CheY-like
RPE_RS06900	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS06900	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS06905	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS06910	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS06915	SSF111369	HlyD-like secretion proteins
RPE_RS06920	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS06920	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS06920	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS06925	SSF46689	Homeodomain-like
RPE_RS06925	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS06930	SSF50475	FMN-binding split barrel
RPE_RS06935	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS06935	SSF46785	"Winged helix" DNA-binding domain
RPE_RS06940	SSF51905	FAD/NAD(P)-binding domain
RPE_RS06940	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS06945	SSF50331	MOP-like
RPE_RS06945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06950	SSF50331	MOP-like
RPE_RS06950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06955	SSF161098	MetI-like
RPE_RS06960	SSF161098	MetI-like
RPE_RS06970	SSF53850	Periplasmic binding protein-like II
RPE_RS06975	SSF51395	FMN-linked oxidoreductases
RPE_RS06990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS06995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS07000	SSF53822	Periplasmic binding protein-like I
RPE_RS07005	SSF47090	PGBD-like
RPE_RS07005	SSF53955	Lysozyme-like
RPE_RS07010	SSF143011	RelE-like
RPE_RS07020	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS07025	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS07040	SSF56300	Metallo-dependent phosphatases
RPE_RS07045	SSF55811	Nudix
RPE_RS07050	SSF50182	Sm-like ribonucleoproteins
RPE_RS07050	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RPE_RS07050	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RPE_RS07055	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS07060	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS07065	SSF47598	Ribbon-helix-helix
RPE_RS07070	SSF56935	Porins
RPE_RS07095	SSF55895	Ribonuclease Rh-like
RPE_RS07100	SSF52374	Nucleotidylyl transferase
RPE_RS07100	SSF82114	Riboflavin kinase-like
RPE_RS07105	SSF51161	Trimeric LpxA-like enzymes
RPE_RS07120	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_RS07120	SSF50677	ValRS/IleRS/LeuRS editing domain
RPE_RS07120	SSF52374	Nucleotidylyl transferase
RPE_RS07135	SSF63411	LuxS/MPP-like metallohydrolase
RPE_RS07140	SSF63411	LuxS/MPP-like metallohydrolase
RPE_RS07145	SSF75620	Release factor
RPE_RS07150	SSF118116	DNA mismatch repair protein MutL
RPE_RS07150	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS07150	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS07155	SSF47598	Ribbon-helix-helix
RPE_RS07165	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPE_RS07170	SSF46785	"Winged helix" DNA-binding domain
RPE_RS07175	SSF52172	CheY-like
RPE_RS07180	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS07180	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS07185	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS07185	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07195	SSF52121	Lumazine synthase
RPE_RS07200	SSF53271	PRTase-like
RPE_RS07210	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RPE_RS07215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS07230	SSF50715	Ribosomal protein L25-like
RPE_RS07235	SSF53178	Peptidyl-tRNA hydrolase-like
RPE_RS07240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS07240	SSF81271	TGS-like
RPE_RS07250	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS07255	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS07275	SSF56529	FAH
RPE_RS07280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS07280	SSF90123	ABC transporter transmembrane region
RPE_RS07285	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07290	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS07295	SSF56784	HAD-like
RPE_RS07300	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS07305	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07310	SSF52374	Nucleotidylyl transferase
RPE_RS07310	SSF53613	Ribokinase-like
RPE_RS07315	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07320	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07320	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS07325	SSF53383	PLP-dependent transferases
RPE_RS07335	SSF53067	Actin-like ATPase domain
RPE_RS07345	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_RS07345	SSF56003	Molybdenum cofactor-binding domain
RPE_RS07350	SSF47175	Cytochromes
RPE_RS07355	SSF46626	Cytochrome c
RPE_RS07360	SSF54909	Dimeric alpha+beta barrel
RPE_RS07365	SSF53613	Ribokinase-like
RPE_RS07370	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS07375	SSF56300	Metallo-dependent phosphatases
RPE_RS07380	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS07385	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS07395	SSF103473	MFS general substrate transporter
RPE_RS07400	SSF51604	Enolase C-terminal domain-like
RPE_RS07400	SSF54826	Enolase N-terminal domain-like
RPE_RS07405	SSF52091	SpoIIaa-like
RPE_RS07410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS07420	SSF58113	Apolipoprotein A-I
RPE_RS07425	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS07430	SSF54292	2Fe-2S ferredoxin-like
RPE_RS07435	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS07440	SSF51905	FAD/NAD(P)-binding domain
RPE_RS07450	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS07455	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS07455	SSF52172	CheY-like
RPE_RS07455	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS07460	SSF141868	EAL domain-like
RPE_RS07460	SSF55073	Nucleotide cyclase
RPE_RS07470	SSF55073	Nucleotide cyclase
RPE_RS07475	SSF47644	Methionine synthase domain
RPE_RS07475	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_RS07480	SSF52266	SGNH hydrolase
RPE_RS07485	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS07490	SSF47598	Ribbon-helix-helix
RPE_RS07500	SSF47240	Ferritin-like
RPE_RS07525	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS07530	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS07535	SSF53254	Phosphoglycerate mutase-like
RPE_RS07540	SSF51905	FAD/NAD(P)-binding domain
RPE_RS07545	SSF51316	Mss4-like
RPE_RS07555	SSF117143	Flagellar hook protein flgE
RPE_RS07560	SSF64518	Phase 1 flagellin
RPE_RS07565	SSF64518	Phase 1 flagellin
RPE_RS07570	SSF53697	SIS domain
RPE_RS07575	SSF56784	HAD-like
RPE_RS07580	SSF51569	Aldolase
RPE_RS07585	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07590	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07595	SSF52374	Nucleotidylyl transferase
RPE_RS07595	SSF53613	Ribokinase-like
RPE_RS07600	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07600	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS07605	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS07605	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07605	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPE_RS07610	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07615	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS07620	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS07625	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS07630	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS07630	SSF52922	TK C-terminal domain-like
RPE_RS07635	SSF51182	RmlC-like cupins
RPE_RS07640	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS07645	SSF53383	PLP-dependent transferases
RPE_RS07650	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS07655	SSF64518	Phase 1 flagellin
RPE_RS07660	SSF48452	TPR-like
RPE_RS07660	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS07665	SSF64518	Phase 1 flagellin
RPE_RS07710	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
RPE_RS07710	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_RS07715	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS07730	SSF117143	Flagellar hook protein flgE
RPE_RS07735	SSF117143	Flagellar hook protein flgE
RPE_RS07745	SSF101801	Surface presentation of antigens (SPOA)
RPE_RS07745	SSF103039	CheC-like
RPE_RS07755	SSF158791	MgtE N-terminal domain-like
RPE_RS07760	SSF48452	TPR-like
RPE_RS07765	SSF103473	MFS general substrate transporter
RPE_RS07770	SSF158472	HAMP domain-like
RPE_RS07770	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS07780	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS07780	SSF52172	CheY-like
RPE_RS07780	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS07780	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS07825	SSF160544	EscU C-terminal domain-like
RPE_RS07830	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS07830	SSF52172	CheY-like
RPE_RS07830	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS07830	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS07845	SSF54427	NTF2-like
RPE_RS07850	SSF56436	C-type lectin-like
RPE_RS07855	SSF47616	GST C-terminal domain-like
RPE_RS07855	SSF52833	Thioredoxin-like
RPE_RS07895	SSF117457	FumA C-terminal domain-like
RPE_RS07925	SSF46689	Homeodomain-like
RPE_RS07925	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS07930	SSF82199	SET domain
RPE_RS07940	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS07945	SSF52833	Thioredoxin-like
RPE_RS07950	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS07955	SSF52129	Caspase-like
RPE_RS08000	SSF141371	PilZ domain-like
RPE_RS08015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08015	SSF54752	RecA protein, C-terminal domain
RPE_RS08020	SSF53383	PLP-dependent transferases
RPE_RS08025	SSF51230	Single hybrid motif
RPE_RS08030	SSF101790	Aminomethyltransferase beta-barrel domain
RPE_RS08030	SSF103025	Folate-binding domain
RPE_RS08035	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
RPE_RS08035	SSF50447	Translation proteins
RPE_RS08035	SSF55186	ThrRS/AlaRS common domain
RPE_RS08035	SSF55681	Class II aaRS and biotin synthetases
RPE_RS08040	SSF50993	Peptidase/esterase 'gauge' domain
RPE_RS08040	SSF53474	alpha/beta-Hydrolases
RPE_RS08045	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS08055	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS08060	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_RS08065	SSF75217	alpha/beta knot
RPE_RS08070	SSF47598	Ribbon-helix-helix
RPE_RS08080	SSF54534	FKBP-like
RPE_RS08090	SSF56104	SAICAR synthase-like
RPE_RS08095	SSF82697	PurS-like
RPE_RS08105	SSF52317	Class I glutamine amidotransferase-like
RPE_RS08115	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS08120	SSF55326	PurM N-terminal domain-like
RPE_RS08120	SSF56042	PurM C-terminal domain-like
RPE_RS08135	SSF82657	BolA-like
RPE_RS08145	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS08150	SSF109854	DinB/YfiT-like putative metalloenzymes
RPE_RS08150	SSF56436	C-type lectin-like
RPE_RS08155	SSF52833	Thioredoxin-like
RPE_RS08160	SSF52949	Macro domain-like
RPE_RS08165	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS08180	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS08195	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS08210	SSF53383	PLP-dependent transferases
RPE_RS08215	SSF55174	Alpha-L RNA-binding motif
RPE_RS08220	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS08225	SSF52777	CoA-dependent acyltransferases
RPE_RS08230	SSF51182	RmlC-like cupins
RPE_RS08235	SSF53681	Aspartate/glutamate racemase
RPE_RS08240	SSF81342	Transmembrane di-heme cytochromes
RPE_RS08245	SSF50800	PK beta-barrel domain-like
RPE_RS08250	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS08255	SSF47598	Ribbon-helix-helix
RPE_RS08260	SSF48557	L-aspartase-like
RPE_RS08275	SSF51366	Ribulose-phoshate binding barrel
RPE_RS08280	SSF47473	EF-hand
RPE_RS08285	SSF56266	DmpA/ArgJ-like
RPE_RS08295	SSF82771	GIY-YIG endonuclease
RPE_RS08300	SSF53822	Periplasmic binding protein-like I
RPE_RS08305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08330	SSF53474	alpha/beta-Hydrolases
RPE_RS08335	SSF55961	Bet v1-like
RPE_RS08340	SSF47741	CO dehydrogenase ISP C-domain like
RPE_RS08340	SSF54292	2Fe-2S ferredoxin-like
RPE_RS08345	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPE_RS08345	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS08350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08355	SSF53300	vWA-like
RPE_RS08370	SSF53218	Molybdenum cofactor biosynthesis proteins
RPE_RS08370	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS08375	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS08390	SSF46689	Homeodomain-like
RPE_RS08390	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS08395	SSF111369	HlyD-like secretion proteins
RPE_RS08400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08430	SSF117396	TM1631-like
RPE_RS08435	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS08445	SSF51905	FAD/NAD(P)-binding domain
RPE_RS08445	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_RS08450	SSF53613	Ribokinase-like
RPE_RS08455	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS08460	SSF46689	Homeodomain-like
RPE_RS08465	SSF111369	HlyD-like secretion proteins
RPE_RS08470	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS08470	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS08470	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS08475	SSF51905	FAD/NAD(P)-binding domain
RPE_RS08475	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS08485	SSF53474	alpha/beta-Hydrolases
RPE_RS08495	SSF53474	alpha/beta-Hydrolases
RPE_RS08495	SSF82784	OsmC-like
RPE_RS08500	SSF56524	Oxidoreductase molybdopterin-binding domain
RPE_RS08505	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS08505	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_RS08510	SSF46785	"Winged helix" DNA-binding domain
RPE_RS08510	SSF53850	Periplasmic binding protein-like II
RPE_RS08515	SSF160920	PSTPO5379-like
RPE_RS08520	SSF53822	Periplasmic binding protein-like I
RPE_RS08535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08545	SSF82771	GIY-YIG endonuclease
RPE_RS08550	SSF51658	Xylose isomerase-like
RPE_RS08560	SSF53901	Thiolase-like
RPE_RS08565	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS08570	SSF52096	ClpP/crotonase
RPE_RS08575	SSF56112	Protein kinase-like (PK-like)
RPE_RS08585	SSF52833	Thioredoxin-like
RPE_RS08590	SSF56801	Acetyl-CoA synthetase-like
RPE_RS08595	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS08600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08600	SSF90123	ABC transporter transmembrane region
RPE_RS08610	SSF56770	HydA/Nqo6-like
RPE_RS08615	SSF143243	Nqo5-like
RPE_RS08615	SSF56762	HydB/Nqo4-like
RPE_RS08620	SSF52833	Thioredoxin-like
RPE_RS08625	SSF140490	Nqo1C-terminal domain-like
RPE_RS08625	SSF142019	Nqo1 FMN-binding domain-like
RPE_RS08625	SSF142984	Nqo1 middle domain-like
RPE_RS08630	SSF50692	ADC-like
RPE_RS08630	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_RS08630	SSF54292	2Fe-2S ferredoxin-like
RPE_RS08630	SSF54862	4Fe-4S ferredoxins
RPE_RS08640	SSF54862	4Fe-4S ferredoxins
RPE_RS08670	SSF53383	PLP-dependent transferases
RPE_RS08675	SSF46785	"Winged helix" DNA-binding domain
RPE_RS08675	SSF51206	cAMP-binding domain-like
RPE_RS08680	SSF52172	CheY-like
RPE_RS08685	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS08685	SSF52172	CheY-like
RPE_RS08690	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS08690	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS08690	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS08695	SSF54631	CBS-domain pair
RPE_RS08700	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS08705	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS08710	SSF53474	alpha/beta-Hydrolases
RPE_RS08715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08715	SSF56112	Protein kinase-like (PK-like)
RPE_RS08720	SSF54631	CBS-domain pair
RPE_RS08725	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS08725	SSF52210	Succinyl-CoA synthetase domains
RPE_RS08725	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS08725	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS08730	SSF81301	Nucleotidyltransferase
RPE_RS08740	SSF52091	SpoIIaa-like
RPE_RS08745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08750	SSF159594	XCC0632-like
RPE_RS08755	SSF46626	Cytochrome c
RPE_RS08760	SSF46785	"Winged helix" DNA-binding domain
RPE_RS08760	SSF51206	cAMP-binding domain-like
RPE_RS08765	SSF51206	cAMP-binding domain-like
RPE_RS08765	SSF81324	Voltage-gated potassium channels
RPE_RS08785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08795	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS08795	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS08805	SSF52172	CheY-like
RPE_RS08825	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS08835	SSF51645	Malate synthase G
RPE_RS08840	SSF161098	MetI-like
RPE_RS08845	SSF161098	MetI-like
RPE_RS08850	SSF53850	Periplasmic binding protein-like II
RPE_RS08855	SSF50447	Translation proteins
RPE_RS08855	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPE_RS08855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08860	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS08865	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS08865	SSF53790	Tetrapyrrole methylase
RPE_RS08865	SSF75615	Siroheme synthase middle domains-like
RPE_RS08875	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
RPE_RS08875	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RPE_RS08885	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS08890	SSF53850	Periplasmic binding protein-like II
RPE_RS08895	SSF161098	MetI-like
RPE_RS08900	SSF161098	MetI-like
RPE_RS08905	SSF50331	MOP-like
RPE_RS08905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS08910	SSF55797	PR-1-like
RPE_RS08915	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS08930	SSF47598	Ribbon-helix-helix
RPE_RS08945	SSF46785	"Winged helix" DNA-binding domain
RPE_RS08945	SSF51206	cAMP-binding domain-like
RPE_RS08960	SSF52129	Caspase-like
RPE_RS08965	SSF56801	Acetyl-CoA synthetase-like
RPE_RS08970	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS08975	SSF52096	ClpP/crotonase
RPE_RS08980	SSF56801	Acetyl-CoA synthetase-like
RPE_RS08985	SSF46785	"Winged helix" DNA-binding domain
RPE_RS08985	SSF53850	Periplasmic binding protein-like II
RPE_RS08995	SSF103190	Sensory domain-like
RPE_RS08995	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS08995	SSF52172	CheY-like
RPE_RS08995	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS08995	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS09005	SSF141371	PilZ domain-like
RPE_RS09010	SSF109604	HD-domain/PDEase-like
RPE_RS09015	SSF51905	FAD/NAD(P)-binding domain
RPE_RS09020	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS09025	SSF103088	OmpA-like
RPE_RS09030	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS09035	SSF53901	Thiolase-like
RPE_RS09040	SSF50249	Nucleic acid-binding proteins
RPE_RS09045	SSF75304	Amidase signature (AS) enzymes
RPE_RS09050	SSF56529	FAH
RPE_RS09055	SSF103473	MFS general substrate transporter
RPE_RS09070	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS09070	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS09075	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS09085	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS09095	SSF102114	Radical SAM enzymes
RPE_RS09105	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS09120	SSF48576	Terpenoid synthases
RPE_RS09125	SSF48576	Terpenoid synthases
RPE_RS09130	SSF51905	FAD/NAD(P)-binding domain
RPE_RS09135	SSF53167	Purine and uridine phosphorylases
RPE_RS09140	SSF102114	Radical SAM enzymes
RPE_RS09150	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS09160	SSF53383	PLP-dependent transferases
RPE_RS09170	SSF51905	FAD/NAD(P)-binding domain
RPE_RS09170	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS09175	SSF53187	Zn-dependent exopeptidases
RPE_RS09175	SSF55031	Bacterial exopeptidase dimerisation domain
RPE_RS09180	SSF47240	Ferritin-like
RPE_RS09185	SSF52141	Uracil-DNA glycosylase-like
RPE_RS09190	SSF102114	Radical SAM enzymes
RPE_RS09190	SSF47781	RuvA domain 2-like
RPE_RS09195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS09200	SSF56672	DNA/RNA polymerases
RPE_RS09210	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS09215	SSF159501	EreA/ChaN-like
RPE_RS09220	SSF47598	Ribbon-helix-helix
RPE_RS09235	SSF141868	EAL domain-like
RPE_RS09235	SSF55073	Nucleotide cyclase
RPE_RS09235	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS09245	SSF52096	ClpP/crotonase
RPE_RS09260	SSF55073	Nucleotide cyclase
RPE_RS09265	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS09265	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS09280	SSF51126	Pectin lyase-like
RPE_RS09290	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
RPE_RS09295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS09310	SSF81301	Nucleotidyltransferase
RPE_RS09320	SSF143120	YefM-like
RPE_RS09325	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
RPE_RS09325	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_RS09330	SSF51316	Mss4-like
RPE_RS09335	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
RPE_RS09335	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_RS09340	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
RPE_RS09345	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_RS09350	SSF51717	Dihydropteroate synthetase-like
RPE_RS09365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS09370	SSF53187	Zn-dependent exopeptidases
RPE_RS09375	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS09380	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS09385	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS09410	SSF82649	SufE/NifU
RPE_RS09420	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS09420	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS09420	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS09425	SSF47090	PGBD-like
RPE_RS09460	SSF160935	VPA0735-like
RPE_RS09465	SSF53955	Lysozyme-like
RPE_RS09465	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS09480	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS09485	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS09490	SSF158472	HAMP domain-like
RPE_RS09490	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS09500	SSF46689	Homeodomain-like
RPE_RS09500	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS09505	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS09525	SSF82771	GIY-YIG endonuclease
RPE_RS09535	SSF141371	PilZ domain-like
RPE_RS09550	SSF50789	Herpes virus serine proteinase, assemblin
RPE_RS09590	SSF56563	Major capsid protein gp5
RPE_RS09600	SSF48371	ARM repeat
RPE_RS09610	SSF50494	Trypsin-like serine proteases
RPE_RS09660	SSF54001	Cysteine proteinases
RPE_RS09665	SSF51445	(Trans)glycosidases
RPE_RS09675	SSF53955	Lysozyme-like
RPE_RS09685	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS09685	SSF52172	CheY-like
RPE_RS09690	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS09690	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS09705	SSF48452	TPR-like
RPE_RS09710	SSF82093	Heme chaperone CcmE
RPE_RS09725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS09730	SSF47240	Ferritin-like
RPE_RS09735	SSF47240	Ferritin-like
RPE_RS09735	SSF54292	2Fe-2S ferredoxin-like
RPE_RS09740	SSF50156	PDZ domain-like
RPE_RS09740	SSF50494	Trypsin-like serine proteases
RPE_RS09745	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS09745	SSF52172	CheY-like
RPE_RS09750	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS09755	SSF158472	HAMP domain-like
RPE_RS09755	SSF55073	Nucleotide cyclase
RPE_RS09760	SSF158472	HAMP domain-like
RPE_RS09760	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS09760	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS09765	SSF81301	Nucleotidyltransferase
RPE_RS09765	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
RPE_RS09775	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS09775	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS09785	SSF51658	Xylose isomerase-like
RPE_RS09800	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS09800	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS09800	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS09805	SSF160240	Cation efflux protein cytoplasmic domain-like
RPE_RS09805	SSF161111	Cation efflux protein transmembrane domain-like
RPE_RS09810	SSF56529	FAH
RPE_RS09815	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS09815	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS09835	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_RS09840	SSF46785	"Winged helix" DNA-binding domain
RPE_RS09840	SSF48008	GntR ligand-binding domain-like
RPE_RS09865	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS09865	SSF52172	CheY-like
RPE_RS09870	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS09880	SSF47729	IHF-like DNA-binding proteins
RPE_RS09905	SSF47598	Ribbon-helix-helix
RPE_RS09905	SSF55021	ACT-like
RPE_RS09915	SSF52096	ClpP/crotonase
RPE_RS09920	SSF51395	FMN-linked oxidoreductases
RPE_RS09925	SSF50630	Acid proteases
RPE_RS09930	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS09930	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS09935	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS09935	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS09940	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_RS09940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS09960	SSF102114	Radical SAM enzymes
RPE_RS09970	SSF56784	HAD-like
RPE_RS09975	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS09975	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
RPE_RS09985	SSF51905	FAD/NAD(P)-binding domain
RPE_RS09985	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_RS09990	SSF53474	alpha/beta-Hydrolases
RPE_RS09995	SSF51569	Aldolase
RPE_RS10005	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS10005	SSF56317	Carbon-nitrogen hydrolase
RPE_RS10010	SSF88723	PIN domain-like
RPE_RS10015	SSF89447	AbrB/MazE/MraZ-like
RPE_RS10030	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_RS10030	SSF52374	Nucleotidylyl transferase
RPE_RS10040	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS10045	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
RPE_RS10045	SSF51569	Aldolase
RPE_RS10050	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS10055	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS10060	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_RS10060	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS10065	SSF102405	MCP/YpsA-like
RPE_RS10070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10070	SSF90123	ABC transporter transmembrane region
RPE_RS10090	SSF103088	OmpA-like
RPE_RS10100	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_RS10105	SSF53383	PLP-dependent transferases
RPE_RS10110	SSF53850	Periplasmic binding protein-like II
RPE_RS10125	SSF50129	GroES-like
RPE_RS10125	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS10130	SSF53901	Thiolase-like
RPE_RS10135	SSF53901	Thiolase-like
RPE_RS10140	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS10145	SSF47336	ACP-like
RPE_RS10160	SSF69118	AhpD-like
RPE_RS10165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10170	SSF63829	Calcium-dependent phosphotriesterase
RPE_RS10175	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS10185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10190	SSF55073	Nucleotide cyclase
RPE_RS10190	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS10200	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_RS10205	SSF52821	Rhodanese/Cell cycle control phosphatase
RPE_RS10215	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS10225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10235	SSF89447	AbrB/MazE/MraZ-like
RPE_RS10240	SSF47598	Ribbon-helix-helix
RPE_RS10250	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS10260	SSF57997	Tropomyosin
RPE_RS10265	SSF47090	PGBD-like
RPE_RS10265	SSF53955	Lysozyme-like
RPE_RS10270	SSF161098	MetI-like
RPE_RS10275	SSF161098	MetI-like
RPE_RS10280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10285	SSF53850	Periplasmic binding protein-like II
RPE_RS10310	SSF47240	Ferritin-like
RPE_RS10315	SSF158472	HAMP domain-like
RPE_RS10315	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS10345	SSF47188	Hemerythrin-like
RPE_RS10345	SSF55073	Nucleotide cyclase
RPE_RS10370	SSF143422	Transposase IS200-like
RPE_RS10385	SSF51391	Thiamin phosphate synthase
RPE_RS10390	SSF110399	ThiG-like
RPE_RS10395	SSF54285	MoaD/ThiS
RPE_RS10400	SSF51905	FAD/NAD(P)-binding domain
RPE_RS10400	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS10405	SSF50346	PRC-barrel domain
RPE_RS10410	SSF51905	FAD/NAD(P)-binding domain
RPE_RS10430	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS10440	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_RS10440	SSF51556	Metallo-dependent hydrolases
RPE_RS10445	SSF46785	"Winged helix" DNA-binding domain
RPE_RS10445	SSF53850	Periplasmic binding protein-like II
RPE_RS10450	SSF51430	NAD(P)-linked oxidoreductase
RPE_RS10455	SSF50129	GroES-like
RPE_RS10455	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS10460	SSF46785	"Winged helix" DNA-binding domain
RPE_RS10475	SSF53146	Nitrogenase accessory factor-like
RPE_RS10495	SSF46689	Homeodomain-like
RPE_RS10495	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS10500	SSF111369	HlyD-like secretion proteins
RPE_RS10505	SSF103473	MFS general substrate transporter
RPE_RS10515	SSF56935	Porins
RPE_RS10520	SSF46785	"Winged helix" DNA-binding domain
RPE_RS10520	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS10525	SSF46689	Homeodomain-like
RPE_RS10530	SSF47090	PGBD-like
RPE_RS10530	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPE_RS10535	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS10535	SSF81799	Putative methyltransferase TM0872, insert domain
RPE_RS10545	SSF56519	Penicillin binding protein dimerisation domain
RPE_RS10545	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS10550	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_RS10550	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_RS10550	SSF63418	MurE/MurF N-terminal domain
RPE_RS10555	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_RS10555	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_RS10555	SSF63418	MurE/MurF N-terminal domain
RPE_RS10565	SSF51984	MurCD N-terminal domain
RPE_RS10565	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_RS10565	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_RS10575	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS10580	SSF51984	MurCD N-terminal domain
RPE_RS10580	SSF53244	MurD-like peptide ligases, peptide-binding domain
RPE_RS10580	SSF53623	MurD-like peptide ligases, catalytic domain
RPE_RS10585	SSF82771	GIY-YIG endonuclease
RPE_RS10590	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS10590	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
RPE_RS10600	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS10605	SSF52440	PreATP-grasp domain
RPE_RS10605	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS10615	SSF53067	Actin-like ATPase domain
RPE_RS10620	SSF52490	Tubulin nucleotide-binding domain-like
RPE_RS10620	SSF55307	Tubulin C-terminal domain-like
RPE_RS10625	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS10630	SSF48452	TPR-like
RPE_RS10635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10640	SSF82771	GIY-YIG endonuclease
RPE_RS10645	SSF47781	RuvA domain 2-like
RPE_RS10645	SSF50249	Nucleic acid-binding proteins
RPE_RS10645	SSF52113	BRCT domain
RPE_RS10645	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPE_RS10650	SSF103473	MFS general substrate transporter
RPE_RS10655	SSF53092	Creatinase/prolidase N-terminal domain
RPE_RS10655	SSF55920	Creatinase/aminopeptidase
RPE_RS10665	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS10670	SSF140931	Fic-like
RPE_RS10675	SSF51905	FAD/NAD(P)-binding domain
RPE_RS10680	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS10685	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS10700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10710	SSF143100	TTHA1013/TTHA0281-like
RPE_RS10715	SSF143100	TTHA1013/TTHA0281-like
RPE_RS10720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10730	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS10735	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_RS10735	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS10750	SSF48557	L-aspartase-like
RPE_RS10755	SSF101738	SspB-like
RPE_RS10770	SSF53850	Periplasmic binding protein-like II
RPE_RS10775	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RPE_RS10780	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RPE_RS10795	SSF52151	FabD/lysophospholipase-like
RPE_RS10820	SSF56349	DNA breaking-rejoining enzymes
RPE_RS10830	SSF56349	DNA breaking-rejoining enzymes
RPE_RS10850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10875	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS10880	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS10890	SSF140990	FtsH protease domain-like
RPE_RS10890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10900	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS10905	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RPE_RS10920	SSF53597	Dihydrofolate reductase-like
RPE_RS10925	SSF117892	Band 7/SPFH domain
RPE_RS10930	SSF117892	Band 7/SPFH domain
RPE_RS10940	SSF50156	PDZ domain-like
RPE_RS10940	SSF50494	Trypsin-like serine proteases
RPE_RS10950	SSF64288	Chorismate lyase-like
RPE_RS10960	SSF56784	HAD-like
RPE_RS10965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS10970	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS10970	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS10975	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS10980	SSF55021	ACT-like
RPE_RS10990	SSF89447	AbrB/MazE/MraZ-like
RPE_RS10995	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPE_RS11005	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS11005	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS11010	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS11015	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS11020	SSF53649	Alkaline phosphatase-like
RPE_RS11030	SSF103473	MFS general substrate transporter
RPE_RS11035	SSF161098	MetI-like
RPE_RS11035	SSF53850	Periplasmic binding protein-like II
RPE_RS11040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS11055	SSF55811	Nudix
RPE_RS11060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS11065	SSF89447	AbrB/MazE/MraZ-like
RPE_RS11070	SSF102114	Radical SAM enzymes
RPE_RS11075	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
RPE_RS11075	SSF51569	Aldolase
RPE_RS11110	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS11125	SSF53790	Tetrapyrrole methylase
RPE_RS11130	SSF52317	Class I glutamine amidotransferase-like
RPE_RS11130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS11135	SSF53790	Tetrapyrrole methylase
RPE_RS11140	SSF159664	CobE/GbiG C-terminal domain-like
RPE_RS11145	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS11145	SSF53790	Tetrapyrrole methylase
RPE_RS11155	SSF53790	Tetrapyrrole methylase
RPE_RS11160	SSF53790	Tetrapyrrole methylase
RPE_RS11165	SSF63965	Precorrin-8X methylmutase CbiC/CobH
RPE_RS11175	SSF103501	Respiratory nitrate reductase 1 gamma chain
RPE_RS11180	SSF51905	FAD/NAD(P)-binding domain
RPE_RS11180	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPE_RS11185	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
RPE_RS11190	SSF53790	Tetrapyrrole methylase
RPE_RS11200	SSF55469	FMN-dependent nitroreductase-like
RPE_RS11210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS11215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS11215	SSF90002	Hypothetical protein YjiA, C-terminal domain
RPE_RS11225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS11230	SSF52317	Class I glutamine amidotransferase-like
RPE_RS11230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS11240	SSF53383	PLP-dependent transferases
RPE_RS11255	SSF52096	ClpP/crotonase
RPE_RS11270	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS11270	SSF52172	CheY-like
RPE_RS11270	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS11275	SSF46626	Cytochrome c
RPE_RS11280	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS11280	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS11285	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS11285	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS11290	SSF47616	GST C-terminal domain-like
RPE_RS11290	SSF52833	Thioredoxin-like
RPE_RS11295	SSF46689	Homeodomain-like
RPE_RS11305	SSF56801	Acetyl-CoA synthetase-like
RPE_RS11310	SSF52096	ClpP/crotonase
RPE_RS11315	SSF51230	Single hybrid motif
RPE_RS11315	SSF51246	Rudiment single hybrid motif
RPE_RS11315	SSF52440	PreATP-grasp domain
RPE_RS11315	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS11320	SSF52096	ClpP/crotonase
RPE_RS11330	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS11335	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS11340	SSF53720	ALDH-like
RPE_RS11345	SSF143975	IlvD/EDD N-terminal domain-like
RPE_RS11345	SSF52016	LeuD/IlvD-like
RPE_RS11390	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS11395	SSF46785	"Winged helix" DNA-binding domain
RPE_RS11405	SSF46785	"Winged helix" DNA-binding domain
RPE_RS11420	SSF46785	"Winged helix" DNA-binding domain
RPE_RS11425	SSF53474	alpha/beta-Hydrolases
RPE_RS11430	SSF53474	alpha/beta-Hydrolases
RPE_RS11435	SSF82771	GIY-YIG endonuclease
RPE_RS11440	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS11445	SSF82771	GIY-YIG endonuclease
RPE_RS11450	SSF101327	YgfB-like
RPE_RS11450	SSF103642	Sec-C motif
RPE_RS11455	SSF48592	GroEL equatorial domain-like
RPE_RS11455	SSF52029	GroEL apical domain-like
RPE_RS11455	SSF54849	GroEL-intermediate domain like
RPE_RS11460	SSF50129	GroES-like
RPE_RS11475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS11485	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS11485	SSF52172	CheY-like
RPE_RS11485	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS11500	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS11505	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS11515	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS11520	SSF54001	Cysteine proteinases
RPE_RS11530	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS11535	SSF53218	Molybdenum cofactor biosynthesis proteins
RPE_RS11540	SSF53271	PRTase-like
RPE_RS11550	SSF51726	UROD/MetE-like
RPE_RS11555	SSF47616	GST C-terminal domain-like
RPE_RS11555	SSF52833	Thioredoxin-like
RPE_RS11560	SSF52833	Thioredoxin-like
RPE_RS11565	SSF50129	GroES-like
RPE_RS11565	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS11570	SSF52096	ClpP/crotonase
RPE_RS11585	SSF51905	FAD/NAD(P)-binding domain
RPE_RS11585	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS11600	SSF53474	alpha/beta-Hydrolases
RPE_RS11610	SSF51161	Trimeric LpxA-like enzymes
RPE_RS11630	SSF51161	Trimeric LpxA-like enzymes
RPE_RS11645	SSF46785	"Winged helix" DNA-binding domain
RPE_RS11655	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS11660	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS11660	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
RPE_RS11670	SSF141371	PilZ domain-like
RPE_RS11675	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS11675	SSF52172	CheY-like
RPE_RS11675	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS11675	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS11680	SSF52172	CheY-like
RPE_RS11685	SSF46785	"Winged helix" DNA-binding domain
RPE_RS11685	SSF51206	cAMP-binding domain-like
RPE_RS11695	SSF144091	Rhomboid-like
RPE_RS11700	SSF54631	CBS-domain pair
RPE_RS11705	SSF52151	FabD/lysophospholipase-like
RPE_RS11715	SSF141868	EAL domain-like
RPE_RS11715	SSF55073	Nucleotide cyclase
RPE_RS11715	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS11720	SSF55469	FMN-dependent nitroreductase-like
RPE_RS11730	SSF52954	Class II aaRS ABD-related
RPE_RS11730	SSF55186	ThrRS/AlaRS common domain
RPE_RS11730	SSF55681	Class II aaRS and biotin synthetases
RPE_RS11730	SSF81271	TGS-like
RPE_RS11740	SSF103473	MFS general substrate transporter
RPE_RS11745	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS11750	SSF46689	Homeodomain-like
RPE_RS11765	SSF52096	ClpP/crotonase
RPE_RS11780	SSF82649	SufE/NifU
RPE_RS11785	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_RS11790	SSF141734	HisI-like
RPE_RS11795	SSF55856	Cytochrome b5-like heme/steroid binding domain
RPE_RS11800	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_RS11800	SSF63380	Riboflavin synthase domain-like
RPE_RS11815	SSF53955	Lysozyme-like
RPE_RS11825	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS11830	SSF52172	CheY-like
RPE_RS11835	SSF55073	Nucleotide cyclase
RPE_RS11840	SSF111331	NAD kinase/diacylglycerol kinase-like
RPE_RS11845	SSF48452	TPR-like
RPE_RS11855	SSF56925	OMPA-like
RPE_RS11860	SSF50249	Nucleic acid-binding proteins
RPE_RS11880	SSF52266	SGNH hydrolase
RPE_RS11910	SSF53901	Thiolase-like
RPE_RS11915	SSF56801	Acetyl-CoA synthetase-like
RPE_RS11920	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS11925	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS11925	SSF52210	Succinyl-CoA synthetase domains
RPE_RS11925	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS11930	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS11935	SSF51230	Single hybrid motif
RPE_RS11940	SSF46785	"Winged helix" DNA-binding domain
RPE_RS11940	SSF55781	GAF domain-like
RPE_RS11945	SSF52096	ClpP/crotonase
RPE_RS11950	SSF46689	Homeodomain-like
RPE_RS11950	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS11955	SSF53720	ALDH-like
RPE_RS11965	SSF88723	PIN domain-like
RPE_RS11970	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS11970	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS11975	SSF52096	ClpP/crotonase
RPE_RS11980	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS11980	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS11985	SSF56801	Acetyl-CoA synthetase-like
RPE_RS11990	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS11995	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS12000	SSF160996	HI0933 insert domain-like
RPE_RS12000	SSF51905	FAD/NAD(P)-binding domain
RPE_RS12005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12015	SSF103515	Autotransporter
RPE_RS12015	SSF52743	Subtilisin-like
RPE_RS12020	SSF53597	Dihydrofolate reductase-like
RPE_RS12025	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS12030	SSF52833	Thioredoxin-like
RPE_RS12035	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS12055	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS12065	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS12070	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS12090	SSF81901	HCP-like
RPE_RS12100	SSF52799	(Phosphotyrosine protein) phosphatases II
RPE_RS12115	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS12115	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS12120	SSF52218	Flavoproteins
RPE_RS12125	SSF161111	Cation efflux protein transmembrane domain-like
RPE_RS12140	SSF56918	Light-harvesting complex subunits
RPE_RS12155	SSF143011	RelE-like
RPE_RS12185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12190	SSF53098	Ribonuclease H-like
RPE_RS12215	SSF48295	TrpR-like
RPE_RS12270	SSF158682	TerB-like
RPE_RS12275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12290	SSF53850	Periplasmic binding protein-like II
RPE_RS12295	SSF141868	EAL domain-like
RPE_RS12295	SSF55073	Nucleotide cyclase
RPE_RS12295	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS12305	SSF54975	Acylphosphatase/BLUF domain-like
RPE_RS12325	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS12330	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS12335	SSF141868	EAL domain-like
RPE_RS12335	SSF55073	Nucleotide cyclase
RPE_RS12365	SSF81301	Nucleotidyltransferase
RPE_RS12370	SSF56019	The spindle assembly checkpoint protein mad2
RPE_RS12380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12390	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS12400	SSF53098	Ribonuclease H-like
RPE_RS12410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12425	SSF56349	DNA breaking-rejoining enzymes
RPE_RS12435	SSF56349	DNA breaking-rejoining enzymes
RPE_RS12445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12450	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS12455	SSF140990	FtsH protease domain-like
RPE_RS12455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12465	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS12490	SSF52151	FabD/lysophospholipase-like
RPE_RS12535	SSF158702	Sec63 N-terminal domain-like
RPE_RS12535	SSF52129	Caspase-like
RPE_RS12535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12540	SSF51998	PFL-like glycyl radical enzymes
RPE_RS12540	SSF75625	YebC-like
RPE_RS12545	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS12555	SSF58113	Apolipoprotein A-I
RPE_RS12560	SSF54368	Glutamine synthetase, N-terminal domain
RPE_RS12560	SSF55931	Glutamine synthetase/guanido kinase
RPE_RS12565	SSF54913	GlnB-like
RPE_RS12570	SSF53613	Ribokinase-like
RPE_RS12570	SSF64153	YjeF N-terminal domain-like
RPE_RS12575	SSF49503	Cupredoxins
RPE_RS12585	SSF102735	Trigger factor ribosome-binding domain
RPE_RS12585	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_RS12585	SSF54534	FKBP-like
RPE_RS12590	SSF52096	ClpP/crotonase
RPE_RS12595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12595	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_RS12600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12600	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS12600	SSF88697	PUA domain-like
RPE_RS12615	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS12615	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS12615	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS12620	SSF111369	HlyD-like secretion proteins
RPE_RS12625	SSF53187	Zn-dependent exopeptidases
RPE_RS12625	SSF55031	Bacterial exopeptidase dimerisation domain
RPE_RS12630	SSF47729	IHF-like DNA-binding proteins
RPE_RS12640	SSF48439	Protein prenylyltransferase
RPE_RS12640	SSF48452	TPR-like
RPE_RS12640	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS12650	SSF56770	HydA/Nqo6-like
RPE_RS12655	SSF143243	Nqo5-like
RPE_RS12660	SSF158446	IVS-encoded protein-like
RPE_RS12665	SSF56762	HydB/Nqo4-like
RPE_RS12670	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS12675	SSF52833	Thioredoxin-like
RPE_RS12680	SSF140490	Nqo1C-terminal domain-like
RPE_RS12680	SSF142019	Nqo1 FMN-binding domain-like
RPE_RS12680	SSF142984	Nqo1 middle domain-like
RPE_RS12685	SSF57997	Tropomyosin
RPE_RS12690	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_RS12690	SSF54292	2Fe-2S ferredoxin-like
RPE_RS12690	SSF54862	4Fe-4S ferredoxins
RPE_RS12700	SSF54862	4Fe-4S ferredoxins
RPE_RS12730	SSF50037	C-terminal domain of transcriptional repressors
RPE_RS12730	SSF55681	Class II aaRS and biotin synthetases
RPE_RS12735	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS12740	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS12755	SSF110087	DR1885-like metal-binding protein
RPE_RS12760	SSF52954	Class II aaRS ABD-related
RPE_RS12760	SSF55681	Class II aaRS and biotin synthetases
RPE_RS12770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS12790	SSF160975	AF1531-like
RPE_RS12790	SSF89550	PHP domain-like
RPE_RS12800	SSF88723	PIN domain-like
RPE_RS12805	SSF52313	Ribosomal protein S2
RPE_RS12810	SSF46934	UBA-like
RPE_RS12810	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
RPE_RS12815	SSF53633	Carbamate kinase-like
RPE_RS12820	SSF55194	Ribosome recycling factor, RRF
RPE_RS12825	SSF64005	Undecaprenyl diphosphate synthase
RPE_RS12835	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS12835	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS12835	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
RPE_RS12840	SSF50156	PDZ domain-like
RPE_RS12850	SSF51161	Trimeric LpxA-like enzymes
RPE_RS12855	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS12860	SSF51161	Trimeric LpxA-like enzymes
RPE_RS12870	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS12875	SSF48256	Citrate synthase
RPE_RS12880	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RPE_RS12880	SSF52374	Nucleotidylyl transferase
RPE_RS12885	SSF50715	Ribosomal protein L25-like
RPE_RS12885	SSF52374	Nucleotidylyl transferase
RPE_RS12895	SSF46785	"Winged helix" DNA-binding domain
RPE_RS12895	SSF51306	LexA/Signal peptidase
RPE_RS12900	SSF53218	Molybdenum cofactor biosynthesis proteins
RPE_RS12900	SSF63867	MoeA C-terminal domain-like
RPE_RS12900	SSF63882	MoeA N-terminal region -like
RPE_RS12915	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS12945	SSF56784	HAD-like
RPE_RS12950	SSF103088	OmpA-like
RPE_RS12955	SSF141371	PilZ domain-like
RPE_RS12960	SSF56784	HAD-like
RPE_RS12960	SSF81653	Calcium ATPase, transduction domain A
RPE_RS12960	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
RPE_RS12960	SSF81665	Calcium ATPase, transmembrane domain M
RPE_RS12965	SSF49764	HSP20-like chaperones
RPE_RS12980	SSF51161	Trimeric LpxA-like enzymes
RPE_RS12985	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
RPE_RS12990	SSF51366	Ribulose-phoshate binding barrel
RPE_RS12995	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RPE_RS12995	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RPE_RS13000	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_RS13000	SSF54534	FKBP-like
RPE_RS13005	SSF51351	Triosephosphate isomerase (TIM)
RPE_RS13015	SSF52317	Class I glutamine amidotransferase-like
RPE_RS13015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13020	SSF158837	AGR C 984p-like
RPE_RS13040	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS13045	SSF51569	Aldolase
RPE_RS13050	SSF46548	alpha-helical ferredoxin
RPE_RS13050	SSF47240	Ferritin-like
RPE_RS13050	SSF51971	Nucleotide-binding domain
RPE_RS13050	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_RS13050	SSF63380	Riboflavin synthase domain-like
RPE_RS13055	SSF46955	Putative DNA-binding domain
RPE_RS13055	SSF55781	GAF domain-like
RPE_RS13065	SSF51905	FAD/NAD(P)-binding domain
RPE_RS13065	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS13070	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_RS13075	SSF51604	Enolase C-terminal domain-like
RPE_RS13075	SSF54826	Enolase N-terminal domain-like
RPE_RS13080	SSF50129	GroES-like
RPE_RS13080	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS13090	SSF52218	Flavoproteins
RPE_RS13100	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS13110	SSF51230	Single hybrid motif
RPE_RS13110	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS13110	SSF52922	TK C-terminal domain-like
RPE_RS13120	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
RPE_RS13120	SSF51230	Single hybrid motif
RPE_RS13120	SSF52777	CoA-dependent acyltransferases
RPE_RS13130	SSF51905	FAD/NAD(P)-binding domain
RPE_RS13130	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_RS13145	SSF81901	HCP-like
RPE_RS13150	SSF56219	DNase I-like
RPE_RS13155	SSF111369	HlyD-like secretion proteins
RPE_RS13160	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS13160	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS13160	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS13165	SSF63712	Nicotinic receptor ligand binding domain-like
RPE_RS13170	SSF103190	Sensory domain-like
RPE_RS13175	SSF46689	Homeodomain-like
RPE_RS13180	SSF89360	HesB-like domain
RPE_RS13185	SSF109604	HD-domain/PDEase-like
RPE_RS13200	SSF48435	Bacterial muramidases
RPE_RS13200	SSF53955	Lysozyme-like
RPE_RS13220	SSF74653	TolA/TonB C-terminal domain
RPE_RS13225	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS13225	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS13235	SSF51126	Pectin lyase-like
RPE_RS13245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13260	SSF56935	Porins
RPE_RS13270	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS13270	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS13280	SSF51126	Pectin lyase-like
RPE_RS13285	SSF74653	TolA/TonB C-terminal domain
RPE_RS13290	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS13290	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS13300	SSF51126	Pectin lyase-like
RPE_RS13305	SSF53098	Ribonuclease H-like
RPE_RS13310	SSF74653	TolA/TonB C-terminal domain
RPE_RS13315	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS13315	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS13325	SSF51126	Pectin lyase-like
RPE_RS13345	SSF54523	Pili subunits
RPE_RS13355	SSF160246	EspE N-terminal domain-like
RPE_RS13355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13395	SSF48452	TPR-like
RPE_RS13395	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS13400	SSF53850	Periplasmic binding protein-like II
RPE_RS13405	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS13430	SSF52768	Arginase/deacetylase
RPE_RS13450	SSF56655	Carbohydrate phosphatase
RPE_RS13455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13460	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS13460	SSF52922	TK C-terminal domain-like
RPE_RS13465	SSF51569	Aldolase
RPE_RS13470	SSF51649	RuBisCo, C-terminal domain
RPE_RS13470	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPE_RS13475	SSF56784	HAD-like
RPE_RS13500	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_RS13500	SSF52374	Nucleotidylyl transferase
RPE_RS13500	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
RPE_RS13505	SSF110997	Sporulation related repeat
RPE_RS13510	SSF51445	(Trans)glycosidases
RPE_RS13520	SSF46785	"Winged helix" DNA-binding domain
RPE_RS13545	SSF46589	tRNA-binding arm
RPE_RS13545	SSF55681	Class II aaRS and biotin synthetases
RPE_RS13560	SSF64167	SurE-like
RPE_RS13565	SSF52172	CheY-like
RPE_RS13570	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS13575	SSF51261	Duplicated hybrid motif
RPE_RS13575	SSF54106	LysM domain
RPE_RS13585	SSF55248	PCD-like
RPE_RS13590	SSF53850	Periplasmic binding protein-like II
RPE_RS13595	SSF50447	Translation proteins
RPE_RS13595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13595	SSF54980	EF-G C-terminal domain-like
RPE_RS13600	SSF54534	FKBP-like
RPE_RS13610	SSF56918	Light-harvesting complex subunits
RPE_RS13615	SSF56918	Light-harvesting complex subunits
RPE_RS13630	SSF53098	Ribonuclease H-like
RPE_RS13635	SSF74653	TolA/TonB C-terminal domain
RPE_RS13640	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS13640	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS13650	SSF51126	Pectin lyase-like
RPE_RS13660	SSF48239	Terpenoid cyclases/Protein prenyltransferases
RPE_RS13665	SSF53955	Lysozyme-like
RPE_RS13665	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS13675	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RPE_RS13680	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS13690	SSF53383	PLP-dependent transferases
RPE_RS13695	SSF53850	Periplasmic binding protein-like II
RPE_RS13700	SSF161098	MetI-like
RPE_RS13705	SSF161098	MetI-like
RPE_RS13710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13720	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS13725	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS13735	SSF51905	FAD/NAD(P)-binding domain
RPE_RS13740	SSF56954	Outer membrane efflux proteins (OEP)
RPE_RS13745	SSF111369	HlyD-like secretion proteins
RPE_RS13750	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS13750	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS13750	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS13755	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS13755	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS13755	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS13795	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS13800	SSF56954	Outer membrane efflux proteins (OEP)
RPE_RS13810	SSF46589	tRNA-binding arm
RPE_RS13810	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_RS13810	SSF50677	ValRS/IleRS/LeuRS editing domain
RPE_RS13810	SSF52374	Nucleotidylyl transferase
RPE_RS13815	SSF50486	FMT C-terminal domain-like
RPE_RS13820	SSF102114	Radical SAM enzymes
RPE_RS13825	SSF55961	Bet v1-like
RPE_RS13830	SSF142433	CinA-like
RPE_RS13835	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS13835	SSF69765	IpsF-like
RPE_RS13840	SSF51395	FMN-linked oxidoreductases
RPE_RS13845	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS13845	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS13845	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS13850	SSF46689	Homeodomain-like
RPE_RS13850	SSF52172	CheY-like
RPE_RS13850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13855	SSF158472	HAMP domain-like
RPE_RS13855	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS13855	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS13855	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS13860	SSF46689	Homeodomain-like
RPE_RS13860	SSF52172	CheY-like
RPE_RS13860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13865	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RPE_RS13870	SSF50182	Sm-like ribonucleoproteins
RPE_RS13875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS13880	SSF101904	GyrA/ParC C-terminal domain-like
RPE_RS13880	SSF56719	Type II DNA topoisomerase
RPE_RS13890	SSF52374	Nucleotidylyl transferase
RPE_RS13895	SSF50891	Cyclophilin-like
RPE_RS13900	SSF74653	TolA/TonB C-terminal domain
RPE_RS13905	SSF50891	Cyclophilin-like
RPE_RS13910	SSF111337	QueA-like
RPE_RS13915	SSF51713	tRNA-guanine transglycosylase
RPE_RS13925	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS13965	SSF51445	(Trans)glycosidases
RPE_RS13965	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS13975	SSF51445	(Trans)glycosidases
RPE_RS13990	SSF51161	Trimeric LpxA-like enzymes
RPE_RS13990	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS13995	SSF53697	SIS domain
RPE_RS13995	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS14005	SSF50249	Nucleic acid-binding proteins
RPE_RS14005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14010	SSF109910	YgfY-like
RPE_RS14015	SSF141259	CarD-like
RPE_RS14015	SSF143517	TRCF domain-like
RPE_RS14015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14025	SSF56801	Acetyl-CoA synthetase-like
RPE_RS14030	SSF53850	Periplasmic binding protein-like II
RPE_RS14040	SSF141255	YccV-like
RPE_RS14050	SSF51905	FAD/NAD(P)-binding domain
RPE_RS14065	SSF50129	GroES-like
RPE_RS14065	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS14075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14100	SSF52200	Toll/Interleukin receptor TIR domain
RPE_RS14105	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS14110	SSF53383	PLP-dependent transferases
RPE_RS14120	SSF53597	Dihydrofolate reductase-like
RPE_RS14120	SSF53927	Cytidine deaminase-like
RPE_RS14125	SSF63380	Riboflavin synthase domain-like
RPE_RS14130	SSF52121	Lumazine synthase
RPE_RS14135	SSF48013	NusB-like
RPE_RS14140	SSF55326	PurM N-terminal domain-like
RPE_RS14140	SSF56042	PurM C-terminal domain-like
RPE_RS14150	SSF53474	alpha/beta-Hydrolases
RPE_RS14155	SSF56935	Porins
RPE_RS14160	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS14165	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS14165	SSF52172	CheY-like
RPE_RS14170	SSF53474	alpha/beta-Hydrolases
RPE_RS14190	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_RS14195	SSF53901	Thiolase-like
RPE_RS14200	SSF47729	IHF-like DNA-binding proteins
RPE_RS14205	SSF46955	Putative DNA-binding domain
RPE_RS14220	SSF56918	Light-harvesting complex subunits
RPE_RS14225	SSF56918	Light-harvesting complex subunits
RPE_RS14245	SSF46785	"Winged helix" DNA-binding domain
RPE_RS14245	SSF51206	cAMP-binding domain-like
RPE_RS14255	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_RS14260	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_RS14265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14270	SSF53807	"Helical backbone" metal receptor
RPE_RS14280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS14285	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS14295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14300	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS14305	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS14320	SSF54913	GlnB-like
RPE_RS14335	SSF53383	PLP-dependent transferases
RPE_RS14340	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS14345	SSF52096	ClpP/crotonase
RPE_RS14350	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS14355	SSF52161	Ribosomal protein L13
RPE_RS14360	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS14365	SSF55073	Nucleotide cyclase
RPE_RS14370	SSF54909	Dimeric alpha+beta barrel
RPE_RS14380	SSF50685	Barwin-like endoglucanases
RPE_RS14385	SSF53474	alpha/beta-Hydrolases
RPE_RS14390	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS14390	SSF69189	Penicillin-binding protein associated domain
RPE_RS14395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14405	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RPE_RS14405	SSF52374	Nucleotidylyl transferase
RPE_RS14410	SSF51556	Metallo-dependent hydrolases
RPE_RS14415	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS14420	SSF46785	"Winged helix" DNA-binding domain
RPE_RS14420	SSF53850	Periplasmic binding protein-like II
RPE_RS14425	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS14430	SSF103473	MFS general substrate transporter
RPE_RS14435	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS14440	SSF56801	Acetyl-CoA synthetase-like
RPE_RS14455	SSF53649	Alkaline phosphatase-like
RPE_RS14460	SSF46785	"Winged helix" DNA-binding domain
RPE_RS14460	SSF53850	Periplasmic binding protein-like II
RPE_RS14465	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS14470	SSF103190	Sensory domain-like
RPE_RS14470	SSF158472	HAMP domain-like
RPE_RS14470	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS14475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14485	SSF54909	Dimeric alpha+beta barrel
RPE_RS14490	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS14495	SSF101386	all-alpha NTP pyrophosphatases
RPE_RS14500	SSF54631	CBS-domain pair
RPE_RS14500	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS14510	SSF50249	Nucleic acid-binding proteins
RPE_RS14515	SSF56925	OMPA-like
RPE_RS14520	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14545	SSF56925	OMPA-like
RPE_RS14555	SSF81324	Voltage-gated potassium channels
RPE_RS14565	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS14570	SSF158634	RPA2825-like
RPE_RS14580	SSF51905	FAD/NAD(P)-binding domain
RPE_RS14585	SSF48576	Terpenoid synthases
RPE_RS14590	SSF64076	MTH938-like
RPE_RS14595	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS14600	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS14610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14615	SSF51569	Aldolase
RPE_RS14620	SSF51230	Single hybrid motif
RPE_RS14620	SSF51246	Rudiment single hybrid motif
RPE_RS14620	SSF52440	PreATP-grasp domain
RPE_RS14620	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS14625	SSF52096	ClpP/crotonase
RPE_RS14640	SSF53383	PLP-dependent transferases
RPE_RS14645	SSF56925	OMPA-like
RPE_RS14645	SSF69917	OMPT-like
RPE_RS14660	SSF50249	Nucleic acid-binding proteins
RPE_RS14665	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS14670	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS14675	SSF141371	PilZ domain-like
RPE_RS14715	SSF102114	Radical SAM enzymes
RPE_RS14720	SSF55681	Class II aaRS and biotin synthetases
RPE_RS14725	SSF50104	Translation proteins SH3-like domain
RPE_RS14725	SSF50249	Nucleic acid-binding proteins
RPE_RS14730	SSF51261	Duplicated hybrid motif
RPE_RS14735	SSF47090	PGBD-like
RPE_RS14735	SSF53955	Lysozyme-like
RPE_RS14745	SSF64182	DHH phosphoesterases
RPE_RS14750	SSF56784	HAD-like
RPE_RS14755	SSF56655	Carbohydrate phosphatase
RPE_RS14760	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS14760	SSF55021	ACT-like
RPE_RS14760	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS14765	SSF53383	PLP-dependent transferases
RPE_RS14775	SSF53474	alpha/beta-Hydrolases
RPE_RS14780	SSF141868	EAL domain-like
RPE_RS14780	SSF55073	Nucleotide cyclase
RPE_RS14780	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS14790	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS14795	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS14795	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS14805	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS14805	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS14805	SSF56719	Type II DNA topoisomerase
RPE_RS14810	SSF52833	Thioredoxin-like
RPE_RS14815	SSF110087	DR1885-like metal-binding protein
RPE_RS14830	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS14850	SSF52129	Caspase-like
RPE_RS14855	SSF56935	Porins
RPE_RS14865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14870	SSF55073	Nucleotide cyclase
RPE_RS14880	SSF89360	HesB-like domain
RPE_RS14885	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_RS14890	SSF53383	PLP-dependent transferases
RPE_RS14895	SSF101960	Stabilizer of iron transporter SufD
RPE_RS14900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS14910	SSF101960	Stabilizer of iron transporter SufD
RPE_RS14915	SSF53383	PLP-dependent transferases
RPE_RS14920	SSF53474	alpha/beta-Hydrolases
RPE_RS14925	SSF53067	Actin-like ATPase domain
RPE_RS14930	SSF52374	Nucleotidylyl transferase
RPE_RS14930	SSF55174	Alpha-L RNA-binding motif
RPE_RS14940	SSF52833	Thioredoxin-like
RPE_RS14945	SSF51261	Duplicated hybrid motif
RPE_RS14950	SSF75620	Release factor
RPE_RS14955	SSF53955	Lysozyme-like
RPE_RS14955	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS14960	SSF53187	Zn-dependent exopeptidases
RPE_RS14965	SSF50249	Nucleic acid-binding proteins
RPE_RS14970	SSF53383	PLP-dependent transferases
RPE_RS14975	SSF48452	TPR-like
RPE_RS14985	SSF52833	Thioredoxin-like
RPE_RS15000	SSF52304	Type II 3-dehydroquinate dehydratase
RPE_RS15005	SSF51230	Single hybrid motif
RPE_RS15010	SSF51246	Rudiment single hybrid motif
RPE_RS15010	SSF52440	PreATP-grasp domain
RPE_RS15010	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS15015	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS15015	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS15020	SSF52172	CheY-like
RPE_RS15025	SSF52172	CheY-like
RPE_RS15025	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS15030	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS15035	SSF102114	Radical SAM enzymes
RPE_RS15040	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS15050	SSF53474	alpha/beta-Hydrolases
RPE_RS15060	SSF56925	OMPA-like
RPE_RS15070	SSF55073	Nucleotide cyclase
RPE_RS15080	SSF56925	OMPA-like
RPE_RS15085	SSF48452	TPR-like
RPE_RS15085	SSF56925	OMPA-like
RPE_RS15105	SSF46785	"Winged helix" DNA-binding domain
RPE_RS15115	SSF51569	Aldolase
RPE_RS15125	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS15135	SSF55136	Probable bacterial effector-binding domain
RPE_RS15140	SSF55781	GAF domain-like
RPE_RS15140	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS15155	SSF101904	GyrA/ParC C-terminal domain-like
RPE_RS15155	SSF56719	Type II DNA topoisomerase
RPE_RS15160	SSF50249	Nucleic acid-binding proteins
RPE_RS15160	SSF57863	ArfGap/RecO-like zinc finger
RPE_RS15165	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS15175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15175	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPE_RS15180	SSF54768	dsRNA-binding domain-like
RPE_RS15180	SSF69065	RNase III domain-like
RPE_RS15185	SSF51306	LexA/Signal peptidase
RPE_RS15190	SSF56214	4'-phosphopantetheinyl transferase
RPE_RS15195	SSF63892	Pyridoxine 5'-phosphate synthase
RPE_RS15200	SSF109604	HD-domain/PDEase-like
RPE_RS15200	SSF55021	ACT-like
RPE_RS15200	SSF81271	TGS-like
RPE_RS15200	SSF81301	Nucleotidyltransferase
RPE_RS15205	SSF63562	RPB6/omega subunit-like
RPE_RS15215	SSF52141	Uracil-DNA glycosylase-like
RPE_RS15220	SSF74982	Small protein B (SmpB)
RPE_RS15225	SSF81330	Gated mechanosensitive channel
RPE_RS15230	SSF51569	Aldolase
RPE_RS15235	SSF46785	"Winged helix" DNA-binding domain
RPE_RS15240	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS15245	SSF51182	RmlC-like cupins
RPE_RS15250	SSF89562	RraA-like
RPE_RS15255	SSF160467	PH0987 N-terminal domain-like
RPE_RS15255	SSF50891	Cyclophilin-like
RPE_RS15260	SSF50891	Cyclophilin-like
RPE_RS15265	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS15270	SSF102114	Radical SAM enzymes
RPE_RS15275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15290	SSF50447	Translation proteins
RPE_RS15290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15290	SSF54980	EF-G C-terminal domain-like
RPE_RS15295	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS15305	SSF109755	PhoU-like
RPE_RS15330	SSF53822	Periplasmic binding protein-like I
RPE_RS15335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15350	SSF50800	PK beta-barrel domain-like
RPE_RS15350	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS15355	SSF52833	Thioredoxin-like
RPE_RS15370	SSF140478	LemA-like
RPE_RS15380	SSF51905	FAD/NAD(P)-binding domain
RPE_RS15380	SSF54427	NTF2-like
RPE_RS15395	SSF64307	SirA-like
RPE_RS15400	SSF51905	FAD/NAD(P)-binding domain
RPE_RS15400	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_RS15405	SSF51905	FAD/NAD(P)-binding domain
RPE_RS15405	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RPE_RS15410	SSF46626	Cytochrome c
RPE_RS15420	SSF46626	Cytochrome c
RPE_RS15425	SSF56524	Oxidoreductase molybdopterin-binding domain
RPE_RS15425	SSF81296	E set domains
RPE_RS15430	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RPE_RS15430	SSF56300	Metallo-dependent phosphatases
RPE_RS15435	SSF81296	E set domains
RPE_RS15445	SSF46626	Cytochrome c
RPE_RS15450	SSF46626	Cytochrome c
RPE_RS15455	SSF143744	GlcG-like
RPE_RS15460	SSF52833	Thioredoxin-like
RPE_RS15470	SSF52833	Thioredoxin-like
RPE_RS15475	SSF46785	"Winged helix" DNA-binding domain
RPE_RS15485	SSF54862	4Fe-4S ferredoxins
RPE_RS15495	SSF47175	Cytochromes
RPE_RS15500	SSF81342	Transmembrane di-heme cytochromes
RPE_RS15505	SSF160448	PG1857-like
RPE_RS15510	SSF52218	Flavoproteins
RPE_RS15515	SSF47240	Ferritin-like
RPE_RS15525	SSF47240	Ferritin-like
RPE_RS15530	SSF54862	4Fe-4S ferredoxins
RPE_RS15535	SSF49503	Cupredoxins
RPE_RS15535	SSF50974	Nitrous oxide reductase, N-terminal domain
RPE_RS15540	SSF51126	Pectin lyase-like
RPE_RS15545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15555	SSF160387	NosL/MerB-like
RPE_RS15560	SSF143631	ApbE-like
RPE_RS15565	SSF51998	PFL-like glycyl radical enzymes
RPE_RS15570	SSF102114	Radical SAM enzymes
RPE_RS15575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15580	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_RS15580	SSF51556	Metallo-dependent hydrolases
RPE_RS15585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15605	SSF159709	PhnH-like
RPE_RS15615	SSF46785	"Winged helix" DNA-binding domain
RPE_RS15615	SSF64288	Chorismate lyase-like
RPE_RS15620	SSF161098	MetI-like
RPE_RS15625	SSF161098	MetI-like
RPE_RS15630	SSF53850	Periplasmic binding protein-like II
RPE_RS15635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15640	SSF51161	Trimeric LpxA-like enzymes
RPE_RS15645	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_RS15645	SSF51556	Metallo-dependent hydrolases
RPE_RS15655	SSF55229	Cell division protein MinE topological specificity domain
RPE_RS15660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15665	SSF63848	Cell-division inhibitor MinC, C-terminal domain
RPE_RS15670	SSF52317	Class I glutamine amidotransferase-like
RPE_RS15670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15685	SSF53807	"Helical backbone" metal receptor
RPE_RS15690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15695	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_RS15700	SSF55961	Bet v1-like
RPE_RS15705	SSF53300	vWA-like
RPE_RS15715	SSF53300	vWA-like
RPE_RS15725	SSF53300	vWA-like
RPE_RS15730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15735	SSF48666	Methanol dehydrogenase subunit
RPE_RS15740	SSF46626	Cytochrome c
RPE_RS15745	SSF53850	Periplasmic binding protein-like II
RPE_RS15750	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPE_RS15760	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS15765	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS15765	SSF52172	CheY-like
RPE_RS15770	SSF46785	"Winged helix" DNA-binding domain
RPE_RS15775	SSF74653	TolA/TonB C-terminal domain
RPE_RS15790	SSF144064	Heme iron utilization protein-like
RPE_RS15795	SSF54909	Dimeric alpha+beta barrel
RPE_RS15800	SSF56935	Porins
RPE_RS15805	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS15810	SSF102114	Radical SAM enzymes
RPE_RS15820	SSF53807	"Helical backbone" metal receptor
RPE_RS15825	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_RS15830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15850	SSF53474	alpha/beta-Hydrolases
RPE_RS15855	SSF53067	Actin-like ATPase domain
RPE_RS15860	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_RS15860	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS15865	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS15870	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS15875	SSF53383	PLP-dependent transferases
RPE_RS15875	SSF55904	Ornithine decarboxylase C-terminal domain
RPE_RS15880	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS15885	SSF51726	UROD/MetE-like
RPE_RS15895	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS15900	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS15905	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS15910	SSF102114	Radical SAM enzymes
RPE_RS15920	SSF51998	PFL-like glycyl radical enzymes
RPE_RS15925	SSF47240	Ferritin-like
RPE_RS15935	SSF53850	Periplasmic binding protein-like II
RPE_RS15940	SSF56801	Acetyl-CoA synthetase-like
RPE_RS15945	SSF53850	Periplasmic binding protein-like II
RPE_RS15950	SSF161098	MetI-like
RPE_RS15955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15955	SSF55021	ACT-like
RPE_RS15960	SSF51161	Trimeric LpxA-like enzymes
RPE_RS15965	SSF53383	PLP-dependent transferases
RPE_RS15975	SSF53807	"Helical backbone" metal receptor
RPE_RS15980	SSF53807	"Helical backbone" metal receptor
RPE_RS15985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS15990	SSF102114	Radical SAM enzymes
RPE_RS15995	SSF53850	Periplasmic binding protein-like II
RPE_RS16000	SSF51679	Bacterial luciferase-like
RPE_RS16005	SSF161098	MetI-like
RPE_RS16010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16015	SSF50475	FMN-binding split barrel
RPE_RS16020	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16030	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS16035	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS16040	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS16040	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS16045	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16045	SSF52210	Succinyl-CoA synthetase domains
RPE_RS16050	SSF52210	Succinyl-CoA synthetase domains
RPE_RS16050	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS16055	SSF53720	ALDH-like
RPE_RS16060	SSF53850	Periplasmic binding protein-like II
RPE_RS16070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16085	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS16090	SSF53822	Periplasmic binding protein-like I
RPE_RS16095	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_RS16100	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_RS16100	SSF56003	Molybdenum cofactor-binding domain
RPE_RS16105	SSF47741	CO dehydrogenase ISP C-domain like
RPE_RS16105	SSF54292	2Fe-2S ferredoxin-like
RPE_RS16110	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPE_RS16110	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS16125	SSF56801	Acetyl-CoA synthetase-like
RPE_RS16130	SSF53901	Thiolase-like
RPE_RS16135	SSF46785	"Winged helix" DNA-binding domain
RPE_RS16135	SSF48008	GntR ligand-binding domain-like
RPE_RS16145	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS16145	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS16150	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_RS16155	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
RPE_RS16160	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16160	SSF52096	ClpP/crotonase
RPE_RS16165	SSF55298	YjgF-like
RPE_RS16170	SSF56801	Acetyl-CoA synthetase-like
RPE_RS16175	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16180	SSF51395	FMN-linked oxidoreductases
RPE_RS16180	SSF51905	FAD/NAD(P)-binding domain
RPE_RS16185	SSF46785	"Winged helix" DNA-binding domain
RPE_RS16190	SSF54975	Acylphosphatase/BLUF domain-like
RPE_RS16200	SSF89447	AbrB/MazE/MraZ-like
RPE_RS16205	SSF88723	PIN domain-like
RPE_RS16215	SSF143120	YefM-like
RPE_RS16225	SSF51126	Pectin lyase-like
RPE_RS16235	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS16235	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS16265	SSF88723	PIN domain-like
RPE_RS16300	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS16305	SSF52980	Restriction endonuclease-like
RPE_RS16310	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS16315	SSF143120	YefM-like
RPE_RS16340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16350	SSF56349	DNA breaking-rejoining enzymes
RPE_RS16355	SSF52317	Class I glutamine amidotransferase-like
RPE_RS16355	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS16355	SSF54810	GMP synthetase C-terminal dimerisation domain
RPE_RS16360	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS16365	SSF161084	MAPEG domain-like
RPE_RS16375	SSF50129	GroES-like
RPE_RS16375	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16385	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPE_RS16385	SSF54631	CBS-domain pair
RPE_RS16405	SSF103473	MFS general substrate transporter
RPE_RS16410	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS16415	SSF53067	Actin-like ATPase domain
RPE_RS16425	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16425	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPE_RS16425	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_RS16430	SSF50249	Nucleic acid-binding proteins
RPE_RS16430	SSF55261	GAD domain-like
RPE_RS16430	SSF55681	Class II aaRS and biotin synthetases
RPE_RS16440	SSF47819	HRDC-like
RPE_RS16440	SSF53098	Ribonuclease H-like
RPE_RS16450	SSF109604	HD-domain/PDEase-like
RPE_RS16450	SSF53067	Actin-like ATPase domain
RPE_RS16455	SSF140356	PPK N-terminal domain-like
RPE_RS16455	SSF143724	PHP14-like
RPE_RS16455	SSF56024	Phospholipase D/nuclease
RPE_RS16460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16470	SSF55326	PurM N-terminal domain-like
RPE_RS16470	SSF56042	PurM C-terminal domain-like
RPE_RS16475	SSF53328	Formyltransferase
RPE_RS16480	SSF50249	Nucleic acid-binding proteins
RPE_RS16485	SSF54919	Nucleoside diphosphate kinase, NDK
RPE_RS16495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16505	SSF102400	DNA polymerase III chi subunit
RPE_RS16510	SSF52949	Macro domain-like
RPE_RS16510	SSF53187	Zn-dependent exopeptidases
RPE_RS16530	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_RS16535	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_RS16540	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS16545	SSF50129	GroES-like
RPE_RS16545	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16575	SSF53901	Thiolase-like
RPE_RS16580	SSF47336	ACP-like
RPE_RS16585	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16590	SSF52151	FabD/lysophospholipase-like
RPE_RS16590	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
RPE_RS16595	SSF55073	Nucleotide cyclase
RPE_RS16600	SSF54995	Ribosomal protein S6
RPE_RS16605	SSF46911	Ribosomal protein S18
RPE_RS16630	SSF55653	Ribosomal protein L9 C-domain
RPE_RS16630	SSF55658	L9 N-domain-like
RPE_RS16645	SSF48024	N-terminal domain of DnaB helicase
RPE_RS16645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16650	SSF51306	LexA/Signal peptidase
RPE_RS16650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16665	SSF111369	HlyD-like secretion proteins
RPE_RS16670	SSF158472	HAMP domain-like
RPE_RS16670	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS16670	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS16675	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS16675	SSF52172	CheY-like
RPE_RS16685	SSF111369	HlyD-like secretion proteins
RPE_RS16690	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS16690	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS16690	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS16695	SSF56954	Outer membrane efflux proteins (OEP)
RPE_RS16705	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS16710	SSF55073	Nucleotide cyclase
RPE_RS16715	SSF50621	Alanine racemase C-terminal domain-like
RPE_RS16715	SSF51419	PLP-binding barrel
RPE_RS16720	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS16730	SSF51316	Mss4-like
RPE_RS16735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16735	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS16745	SSF53271	PRTase-like
RPE_RS16745	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS16750	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS16765	SSF103473	MFS general substrate transporter
RPE_RS16770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS16785	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS16795	SSF53850	Periplasmic binding protein-like II
RPE_RS16805	SSF81901	HCP-like
RPE_RS16815	SSF55931	Glutamine synthetase/guanido kinase
RPE_RS16815	SSF89095	GatB/YqeY motif
RPE_RS16820	SSF52151	FabD/lysophospholipase-like
RPE_RS16825	SSF75304	Amidase signature (AS) enzymes
RPE_RS16845	SSF141000	Glu-tRNAGln amidotransferase C subunit
RPE_RS16850	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RPE_RS16860	SSF102198	Putative cyclase
RPE_RS16865	SSF46689	Homeodomain-like
RPE_RS16865	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS16870	SSF51905	FAD/NAD(P)-binding domain
RPE_RS16875	SSF53098	Ribonuclease H-like
RPE_RS16885	SSF46785	"Winged helix" DNA-binding domain
RPE_RS16885	SSF51206	cAMP-binding domain-like
RPE_RS16890	SSF46785	"Winged helix" DNA-binding domain
RPE_RS16890	SSF51206	cAMP-binding domain-like
RPE_RS16895	SSF55166	Hedgehog/DD-peptidase
RPE_RS16900	SSF53671	Aspartate/ornithine carbamoyltransferase
RPE_RS16905	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_RS16905	SSF51556	Metallo-dependent hydrolases
RPE_RS16920	SSF102405	MCP/YpsA-like
RPE_RS16930	SSF56712	Prokaryotic type I DNA topoisomerase
RPE_RS16930	SSF57783	Zinc beta-ribbon
RPE_RS16935	SSF50249	Nucleic acid-binding proteins
RPE_RS16945	SSF55811	Nudix
RPE_RS16950	SSF57829	Zn-binding ribosomal proteins
RPE_RS16955	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS16960	SSF52172	CheY-like
RPE_RS16960	SSF55073	Nucleotide cyclase
RPE_RS16965	SSF52172	CheY-like
RPE_RS16975	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
RPE_RS16975	SSF56672	DNA/RNA polymerases
RPE_RS16995	SSF55298	YjgF-like
RPE_RS17000	SSF51695	PLC-like phosphodiesterases
RPE_RS17005	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS17010	SSF54197	HIT-like
RPE_RS17015	SSF118196	YaeB-like
RPE_RS17030	SSF141371	PilZ domain-like
RPE_RS17035	SSF53955	Lysozyme-like
RPE_RS17040	SSF53383	PLP-dependent transferases
RPE_RS17045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17050	SSF53383	PLP-dependent transferases
RPE_RS17060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17060	SSF81923	Double Clp-N motif
RPE_RS17065	SSF54736	ClpS-like
RPE_RS17070	SSF53300	vWA-like
RPE_RS17075	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS17080	SSF46565	Chaperone J-domain
RPE_RS17085	SSF53300	vWA-like
RPE_RS17090	SSF140931	Fic-like
RPE_RS17095	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS17100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17105	SSF52374	Nucleotidylyl transferase
RPE_RS17125	SSF47616	GST C-terminal domain-like
RPE_RS17125	SSF52833	Thioredoxin-like
RPE_RS17130	SSF46785	"Winged helix" DNA-binding domain
RPE_RS17140	SSF51430	NAD(P)-linked oxidoreductase
RPE_RS17145	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS17150	SSF158791	MgtE N-terminal domain-like
RPE_RS17150	SSF161093	MgtE membrane domain-like
RPE_RS17150	SSF54631	CBS-domain pair
RPE_RS17155	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS17160	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS17175	SSF52374	Nucleotidylyl transferase
RPE_RS17175	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS17185	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS17190	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS17205	SSF143120	YefM-like
RPE_RS17210	SSF88723	PIN domain-like
RPE_RS17220	SSF101801	Surface presentation of antigens (SPOA)
RPE_RS17225	SSF55681	Class II aaRS and biotin synthetases
RPE_RS17230	SSF54975	Acylphosphatase/BLUF domain-like
RPE_RS17235	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS17240	SSF51230	Single hybrid motif
RPE_RS17240	SSF51246	Rudiment single hybrid motif
RPE_RS17240	SSF52440	PreATP-grasp domain
RPE_RS17240	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS17255	SSF48173	Cryptochrome/photolyase FAD-binding domain
RPE_RS17255	SSF52425	Cryptochrome/photolyase, N-terminal domain
RPE_RS17265	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS17270	SSF55073	Nucleotide cyclase
RPE_RS17285	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS17285	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS17290	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS17290	SSF52172	CheY-like
RPE_RS17295	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS17300	SSF56300	Metallo-dependent phosphatases
RPE_RS17310	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS17315	SSF52172	CheY-like
RPE_RS17325	SSF53955	Lysozyme-like
RPE_RS17340	SSF109998	Triger factor/SurA peptide-binding domain-like
RPE_RS17340	SSF54534	FKBP-like
RPE_RS17355	SSF74653	TolA/TonB C-terminal domain
RPE_RS17370	SSF49899	Concanavalin A-like lectins/glucanases
RPE_RS17395	SSF74653	TolA/TonB C-terminal domain
RPE_RS17405	SSF50494	Trypsin-like serine proteases
RPE_RS17410	SSF51126	Pectin lyase-like
RPE_RS17420	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS17420	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS17425	SSF74653	TolA/TonB C-terminal domain
RPE_RS17430	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS17430	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS17430	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS17435	SSF111369	HlyD-like secretion proteins
RPE_RS17440	SSF46689	Homeodomain-like
RPE_RS17450	SSF56935	Porins
RPE_RS17455	SSF118196	YaeB-like
RPE_RS17460	SSF53807	"Helical backbone" metal receptor
RPE_RS17465	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_RS17470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17480	SSF46785	"Winged helix" DNA-binding domain
RPE_RS17480	SSF50331	MOP-like
RPE_RS17485	SSF51126	Pectin lyase-like
RPE_RS17490	SSF53738	Phosphoglucomutase, first 3 domains
RPE_RS17490	SSF55957	Phosphoglucomutase, C-terminal domain
RPE_RS17495	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS17505	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS17515	SSF51182	RmlC-like cupins
RPE_RS17515	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS17520	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17545	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS17555	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS17555	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS17555	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPE_RS17560	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS17565	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS17570	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS17575	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS17580	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS17585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17585	SSF90123	ABC transporter transmembrane region
RPE_RS17595	SSF51120	beta-Roll
RPE_RS17595	SSF51126	Pectin lyase-like
RPE_RS17600	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS17600	SSF52172	CheY-like
RPE_RS17625	SSF48295	TrpR-like
RPE_RS17640	SSF158472	HAMP domain-like
RPE_RS17640	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS17645	SSF158472	HAMP domain-like
RPE_RS17645	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS17650	SSF46689	Homeodomain-like
RPE_RS17655	SSF158472	HAMP domain-like
RPE_RS17655	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS17655	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS17660	SSF46626	Cytochrome c
RPE_RS17660	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPE_RS17665	SSF55811	Nudix
RPE_RS17670	SSF51569	Aldolase
RPE_RS17675	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS17680	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS17680	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RPE_RS17710	SSF50494	Trypsin-like serine proteases
RPE_RS17710	SSF54060	His-Me finger endonucleases
RPE_RS17715	SSF51695	PLC-like phosphodiesterases
RPE_RS17720	SSF63840	Ribonuclease domain of colicin E3
RPE_RS17740	SSF52096	ClpP/crotonase
RPE_RS17745	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS17750	SSF160544	EscU C-terminal domain-like
RPE_RS17760	SSF160909	ATP12-like
RPE_RS17770	SSF55120	Pseudouridine synthase
RPE_RS17770	SSF55174	Alpha-L RNA-binding motif
RPE_RS17780	SSF55469	FMN-dependent nitroreductase-like
RPE_RS17785	SSF55469	FMN-dependent nitroreductase-like
RPE_RS17790	SSF54975	Acylphosphatase/BLUF domain-like
RPE_RS17795	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS17800	SSF111038	YjbQ-like
RPE_RS17805	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RPE_RS17810	SSF53822	Periplasmic binding protein-like I
RPE_RS17815	SSF48019	post-AAA+ oligomerization domain-like
RPE_RS17815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17820	SSF50156	PDZ domain-like
RPE_RS17820	SSF50494	Trypsin-like serine proteases
RPE_RS17825	SSF50129	GroES-like
RPE_RS17825	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS17830	SSF51316	Mss4-like
RPE_RS17835	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS17840	SSF64263	Prokaryotic ribosomal protein L17
RPE_RS17845	SSF47789	C-terminal domain of RNA polymerase alpha subunit
RPE_RS17845	SSF55257	RBP11-like subunits of RNA polymerase
RPE_RS17845	SSF56553	Insert subdomain of RNA polymerase alpha subunit
RPE_RS17850	SSF53137	Translational machinery components
RPE_RS17855	SSF46946	S13-like H2TH domain
RPE_RS17860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17865	SSF103491	Preprotein translocase SecY subunit
RPE_RS17870	SSF52080	Ribosomal proteins L15p and L18e
RPE_RS17875	SSF55129	Ribosomal protein L30p/L7e
RPE_RS17880	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS17880	SSF54768	dsRNA-binding domain-like
RPE_RS17885	SSF53137	Translational machinery components
RPE_RS17890	SSF56053	Ribosomal protein L6
RPE_RS17895	SSF56047	Ribosomal protein S8
RPE_RS17900	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_RS17905	SSF55282	RL5-like
RPE_RS17910	SSF50104	Translation proteins SH3-like domain
RPE_RS17915	SSF50193	Ribosomal protein L14
RPE_RS17920	SSF50249	Nucleic acid-binding proteins
RPE_RS17925	SSF46561	Ribosomal protein L29 (L29p)
RPE_RS17930	SSF54686	Ribosomal protein L16p/L10e
RPE_RS17935	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RPE_RS17935	SSF54821	Ribosomal protein S3 C-terminal domain
RPE_RS17940	SSF54843	Ribosomal protein L22
RPE_RS17945	SSF54570	Ribosomal protein S19
RPE_RS17950	SSF50104	Translation proteins SH3-like domain
RPE_RS17950	SSF50249	Nucleic acid-binding proteins
RPE_RS17955	SSF54189	Ribosomal proteins S24e, L23 and L15e
RPE_RS17960	SSF52166	Ribosomal protein L4
RPE_RS17965	SSF50447	Translation proteins
RPE_RS17970	SSF54999	Ribosomal protein S10
RPE_RS17975	SSF50447	Translation proteins
RPE_RS17975	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPE_RS17975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17980	SSF50447	Translation proteins
RPE_RS17980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS17980	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS17980	SSF54980	EF-G C-terminal domain-like
RPE_RS17985	SSF47973	Ribosomal protein S7
RPE_RS17990	SSF50249	Nucleic acid-binding proteins
RPE_RS17995	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS18000	SSF51905	FAD/NAD(P)-binding domain
RPE_RS18005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18005	SSF90123	ABC transporter transmembrane region
RPE_RS18010	SSF51905	FAD/NAD(P)-binding domain
RPE_RS18010	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS18010	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS18015	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPE_RS18020	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RPE_RS18025	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
RPE_RS18025	SSF54736	ClpS-like
RPE_RS18030	SSF160369	Ribosomal protein L10-like
RPE_RS18040	SSF48695	Multiheme cytochromes
RPE_RS18045	SSF56003	Molybdenum cofactor-binding domain
RPE_RS18050	SSF47741	CO dehydrogenase ISP C-domain like
RPE_RS18050	SSF54292	2Fe-2S ferredoxin-like
RPE_RS18055	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18055	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_RS18060	SSF56808	Ribosomal protein L1
RPE_RS18065	SSF46906	Ribosomal protein L11, C-terminal domain
RPE_RS18065	SSF54747	Ribosomal L11/L12e N-terminal domain
RPE_RS18070	SSF50104	Translation proteins SH3-like domain
RPE_RS18070	SSF82679	N-utilization substance G protein NusG, N-terminal domain
RPE_RS18080	SSF50199	Staphylococcal nuclease
RPE_RS18080	SSF50685	Barwin-like endoglucanases
RPE_RS18090	SSF103190	Sensory domain-like
RPE_RS18090	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS18095	SSF50447	Translation proteins
RPE_RS18095	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RPE_RS18095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18100	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS18105	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18110	SSF53254	Phosphoglycerate mutase-like
RPE_RS18115	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18120	SSF56112	Protein kinase-like (PK-like)
RPE_RS18125	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS18125	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS18130	SSF46689	Homeodomain-like
RPE_RS18130	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS18145	SSF53474	alpha/beta-Hydrolases
RPE_RS18150	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS18165	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS18165	SSF52172	CheY-like
RPE_RS18165	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS18165	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS18170	SSF103039	CheC-like
RPE_RS18175	SSF52172	CheY-like
RPE_RS18180	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS18180	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS18180	SSF50341	CheW-like
RPE_RS18180	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS18185	SSF52172	CheY-like
RPE_RS18190	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_RS18190	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS18195	SSF48371	ARM repeat
RPE_RS18200	SSF52172	CheY-like
RPE_RS18200	SSF52738	Methylesterase CheB, C-terminal domain
RPE_RS18205	SSF50341	CheW-like
RPE_RS18210	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS18215	SSF103039	CheC-like
RPE_RS18230	SSF53474	alpha/beta-Hydrolases
RPE_RS18235	SSF51905	FAD/NAD(P)-binding domain
RPE_RS18240	SSF51445	(Trans)glycosidases
RPE_RS18245	SSF47240	Ferritin-like
RPE_RS18255	SSF56219	DNase I-like
RPE_RS18260	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18265	SSF50129	GroES-like
RPE_RS18265	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18270	SSF50692	ADC-like
RPE_RS18270	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_RS18280	SSF48208	Six-hairpin glycosidases
RPE_RS18280	SSF74650	Galactose mutarotase-like
RPE_RS18290	SSF46785	"Winged helix" DNA-binding domain
RPE_RS18290	SSF51206	cAMP-binding domain-like
RPE_RS18305	SSF52833	Thioredoxin-like
RPE_RS18310	SSF52788	Phosphotyrosine protein phosphatases I
RPE_RS18315	SSF46785	"Winged helix" DNA-binding domain
RPE_RS18320	SSF52833	Thioredoxin-like
RPE_RS18330	SSF46785	"Winged helix" DNA-binding domain
RPE_RS18340	SSF47240	Ferritin-like
RPE_RS18350	SSF54001	Cysteine proteinases
RPE_RS18380	SSF49503	Cupredoxins
RPE_RS18390	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18395	SSF46689	Homeodomain-like
RPE_RS18395	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS18400	SSF53474	alpha/beta-Hydrolases
RPE_RS18405	SSF51182	RmlC-like cupins
RPE_RS18410	SSF51649	RuBisCo, C-terminal domain
RPE_RS18410	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
RPE_RS18415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18420	SSF50037	C-terminal domain of transcriptional repressors
RPE_RS18435	SSF55315	L30e-like
RPE_RS18435	SSF75217	alpha/beta knot
RPE_RS18440	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18445	SSF161098	MetI-like
RPE_RS18450	SSF160964	MalF N-terminal region-like
RPE_RS18450	SSF161098	MetI-like
RPE_RS18460	SSF50331	MOP-like
RPE_RS18460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18465	SSF143975	IlvD/EDD N-terminal domain-like
RPE_RS18465	SSF52016	LeuD/IlvD-like
RPE_RS18470	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18475	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18485	SSF53720	ALDH-like
RPE_RS18485	SSF56796	Dehydroquinate synthase-like
RPE_RS18500	SSF141868	EAL domain-like
RPE_RS18500	SSF158472	HAMP domain-like
RPE_RS18500	SSF55073	Nucleotide cyclase
RPE_RS18510	SSF46689	Homeodomain-like
RPE_RS18525	SSF82771	GIY-YIG endonuclease
RPE_RS18535	SSF52833	Thioredoxin-like
RPE_RS18540	SSF75304	Amidase signature (AS) enzymes
RPE_RS18550	SSF53474	alpha/beta-Hydrolases
RPE_RS18555	SSF75169	DsrEFH-like
RPE_RS18560	SSF51569	Aldolase
RPE_RS18560	SSF53697	SIS domain
RPE_RS18565	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS18565	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18570	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18570	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS18575	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS18580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18585	SSF56784	HAD-like
RPE_RS18590	SSF48208	Six-hairpin glycosidases
RPE_RS18595	SSF51445	(Trans)glycosidases
RPE_RS18600	SSF51445	(Trans)glycosidases
RPE_RS18605	SSF51011	Glycosyl hydrolase domain
RPE_RS18605	SSF51445	(Trans)glycosidases
RPE_RS18605	SSF56112	Protein kinase-like (PK-like)
RPE_RS18610	SSF51011	Glycosyl hydrolase domain
RPE_RS18610	SSF51445	(Trans)glycosidases
RPE_RS18610	SSF81296	E set domains
RPE_RS18615	SSF51011	Glycosyl hydrolase domain
RPE_RS18615	SSF51445	(Trans)glycosidases
RPE_RS18615	SSF81296	E set domains
RPE_RS18620	SSF82544	GckA/TtuD-like
RPE_RS18625	SSF51445	(Trans)glycosidases
RPE_RS18635	SSF50249	Nucleic acid-binding proteins
RPE_RS18635	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RPE_RS18640	SSF100939	SPOC domain-like
RPE_RS18650	SSF64307	SirA-like
RPE_RS18655	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS18665	SSF69287	Urease metallochaperone UreE, N-terminal domain
RPE_RS18665	SSF69737	Urease metallochaperone UreE, C-terminal domain
RPE_RS18670	SSF54909	Dimeric alpha+beta barrel
RPE_RS18675	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_RS18675	SSF51556	Metallo-dependent hydrolases
RPE_RS18680	SSF109604	HD-domain/PDEase-like
RPE_RS18685	SSF51278	Urease, beta-subunit
RPE_RS18690	SSF54111	Urease, gamma-subunit
RPE_RS18700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18705	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18720	SSF53822	Periplasmic binding protein-like I
RPE_RS18725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18730	SSF50249	Nucleic acid-binding proteins
RPE_RS18735	SSF50249	Nucleic acid-binding proteins
RPE_RS18770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18790	SSF48452	TPR-like
RPE_RS18795	SSF53187	Zn-dependent exopeptidases
RPE_RS18800	SSF50044	SH3-domain
RPE_RS18800	SSF54001	Cysteine proteinases
RPE_RS18805	SSF55811	Nudix
RPE_RS18810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18815	SSF88723	PIN domain-like
RPE_RS18825	SSF161098	MetI-like
RPE_RS18830	SSF161098	MetI-like
RPE_RS18835	SSF53850	Periplasmic binding protein-like II
RPE_RS18840	SSF53850	Periplasmic binding protein-like II
RPE_RS18845	SSF46626	Cytochrome c
RPE_RS18850	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS18855	SSF53850	Periplasmic binding protein-like II
RPE_RS18855	SSF55021	ACT-like
RPE_RS18860	SSF51679	Bacterial luciferase-like
RPE_RS18865	SSF51730	FAD-linked oxidoreductase
RPE_RS18870	SSF47644	Methionine synthase domain
RPE_RS18870	SSF51717	Dihydropteroate synthetase-like
RPE_RS18870	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_RS18870	SSF56507	Methionine synthase activation domain-like
RPE_RS18870	SSF82282	Homocysteine S-methyltransferase
RPE_RS18875	SSF53067	Actin-like ATPase domain
RPE_RS18880	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS18880	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS18885	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS18885	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS18895	SSF53901	Thiolase-like
RPE_RS18900	SSF56801	Acetyl-CoA synthetase-like
RPE_RS18905	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS18905	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18905	SSF52096	ClpP/crotonase
RPE_RS18910	SSF46785	"Winged helix" DNA-binding domain
RPE_RS18910	SSF55781	GAF domain-like
RPE_RS18915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18935	SSF53822	Periplasmic binding protein-like I
RPE_RS18940	SSF53822	Periplasmic binding protein-like I
RPE_RS18945	SSF53822	Periplasmic binding protein-like I
RPE_RS18950	SSF53822	Periplasmic binding protein-like I
RPE_RS18960	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS18965	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS18970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18975	SSF46785	"Winged helix" DNA-binding domain
RPE_RS18985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS18990	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19000	SSF55073	Nucleotide cyclase
RPE_RS19005	SSF53822	Periplasmic binding protein-like I
RPE_RS19010	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS19015	SSF56801	Acetyl-CoA synthetase-like
RPE_RS19020	SSF52096	ClpP/crotonase
RPE_RS19045	SSF51905	FAD/NAD(P)-binding domain
RPE_RS19045	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS19055	SSF46785	"Winged helix" DNA-binding domain
RPE_RS19055	SSF53850	Periplasmic binding protein-like II
RPE_RS19060	SSF50475	FMN-binding split barrel
RPE_RS19095	SSF51206	cAMP-binding domain-like
RPE_RS19100	SSF52096	ClpP/crotonase
RPE_RS19105	SSF55469	FMN-dependent nitroreductase-like
RPE_RS19110	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS19110	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS19115	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS19115	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS19120	SSF56801	Acetyl-CoA synthetase-like
RPE_RS19125	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS19130	SSF46689	Homeodomain-like
RPE_RS19130	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS19135	SSF53901	Thiolase-like
RPE_RS19140	SSF56801	Acetyl-CoA synthetase-like
RPE_RS19145	SSF53041	Resolvase-like
RPE_RS19150	SSF103515	Autotransporter
RPE_RS19150	SSF52266	SGNH hydrolase
RPE_RS19155	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS19165	SSF46785	"Winged helix" DNA-binding domain
RPE_RS19165	SSF53850	Periplasmic binding protein-like II
RPE_RS19170	SSF142433	CinA-like
RPE_RS19185	SSF46689	Homeodomain-like
RPE_RS19185	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS19200	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
RPE_RS19200	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
RPE_RS19205	SSF103473	MFS general substrate transporter
RPE_RS19210	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS19225	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
RPE_RS19230	SSF47729	IHF-like DNA-binding proteins
RPE_RS19235	SSF53254	Phosphoglycerate mutase-like
RPE_RS19245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19270	SSF53822	Periplasmic binding protein-like I
RPE_RS19275	SSF54197	HIT-like
RPE_RS19280	SSF56935	Porins
RPE_RS19285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19290	SSF161098	MetI-like
RPE_RS19295	SSF53850	Periplasmic binding protein-like II
RPE_RS19300	SSF53920	Fe-only hydrogenase
RPE_RS19300	SSF54292	2Fe-2S ferredoxin-like
RPE_RS19300	SSF54862	4Fe-4S ferredoxins
RPE_RS19305	SSF140490	Nqo1C-terminal domain-like
RPE_RS19305	SSF46548	alpha-helical ferredoxin
RPE_RS19305	SSF51971	Nucleotide-binding domain
RPE_RS19310	SSF53067	Actin-like ATPase domain
RPE_RS19315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19315	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RPE_RS19315	SSF75138	HprK N-terminal domain-like
RPE_RS19335	SSF49503	Cupredoxins
RPE_RS19340	SSF81442	Cytochrome c oxidase subunit I-like
RPE_RS19390	SSF56784	HAD-like
RPE_RS19390	SSF81653	Calcium ATPase, transduction domain A
RPE_RS19395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19400	SSF110857	Gamma-glutamyl cyclotransferase-like
RPE_RS19410	SSF53807	"Helical backbone" metal receptor
RPE_RS19420	SSF53807	"Helical backbone" metal receptor
RPE_RS19425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19430	SSF46689	Homeodomain-like
RPE_RS19430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19430	SSF55781	GAF domain-like
RPE_RS19435	SSF50475	FMN-binding split barrel
RPE_RS19440	SSF46785	"Winged helix" DNA-binding domain
RPE_RS19440	SSF53383	PLP-dependent transferases
RPE_RS19450	SSF53850	Periplasmic binding protein-like II
RPE_RS19455	SSF161098	MetI-like
RPE_RS19460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19465	SSF53633	Carbamate kinase-like
RPE_RS19470	SSF53633	Carbamate kinase-like
RPE_RS19475	SSF81342	Transmembrane di-heme cytochromes
RPE_RS19495	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
RPE_RS19495	SSF63380	Riboflavin synthase domain-like
RPE_RS19515	SSF69047	Hypothetical protein YjbJ
RPE_RS19520	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS19525	SSF53720	ALDH-like
RPE_RS19525	SSF56801	Acetyl-CoA synthetase-like
RPE_RS19535	SSF56801	Acetyl-CoA synthetase-like
RPE_RS19540	SSF56801	Acetyl-CoA synthetase-like
RPE_RS19545	SSF103473	MFS general substrate transporter
RPE_RS19550	SSF52091	SpoIIaa-like
RPE_RS19555	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS19560	SSF53850	Periplasmic binding protein-like II
RPE_RS19565	SSF158472	HAMP domain-like
RPE_RS19565	SSF81606	PP2C-like
RPE_RS19575	SSF53720	ALDH-like
RPE_RS19580	SSF51905	FAD/NAD(P)-binding domain
RPE_RS19580	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS19585	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS19595	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS19600	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS19600	SSF52172	CheY-like
RPE_RS19605	SSF53850	Periplasmic binding protein-like II
RPE_RS19610	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS19610	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS19610	SSF52172	CheY-like
RPE_RS19610	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS19615	SSF141868	EAL domain-like
RPE_RS19615	SSF52172	CheY-like
RPE_RS19625	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_RS19625	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS19630	SSF50341	CheW-like
RPE_RS19635	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS19635	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS19635	SSF50341	CheW-like
RPE_RS19635	SSF52172	CheY-like
RPE_RS19635	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS19640	SSF158472	HAMP domain-like
RPE_RS19640	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS19645	SSF158472	HAMP domain-like
RPE_RS19645	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS19650	SSF52172	CheY-like
RPE_RS19660	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS19660	SSF56112	Protein kinase-like (PK-like)
RPE_RS19665	SSF56300	Metallo-dependent phosphatases
RPE_RS19675	SSF102114	Radical SAM enzymes
RPE_RS19675	SSF52242	Cobalamin (vitamin B12)-binding domain
RPE_RS19680	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
RPE_RS19685	SSF102114	Radical SAM enzymes
RPE_RS19705	SSF47240	Ferritin-like
RPE_RS19705	SSF56784	HAD-like
RPE_RS19705	SSF81653	Calcium ATPase, transduction domain A
RPE_RS19705	SSF81665	Calcium ATPase, transmembrane domain M
RPE_RS19715	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
RPE_RS19720	SSF55073	Nucleotide cyclase
RPE_RS19725	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RPE_RS19730	SSF53137	Translational machinery components
RPE_RS19740	SSF46689	Homeodomain-like
RPE_RS19750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19760	SSF111369	HlyD-like secretion proteins
RPE_RS19765	SSF53474	alpha/beta-Hydrolases
RPE_RS19785	SSF51316	Mss4-like
RPE_RS19790	SSF55068	Peptide methionine sulfoxide reductase
RPE_RS19800	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
RPE_RS19800	SSF52335	Methylglyoxal synthase-like
RPE_RS19800	SSF52440	PreATP-grasp domain
RPE_RS19800	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS19805	SSF46557	GreA transcript cleavage protein, N-terminal domain
RPE_RS19805	SSF54534	FKBP-like
RPE_RS19815	SSF46785	"Winged helix" DNA-binding domain
RPE_RS19815	SSF54909	Dimeric alpha+beta barrel
RPE_RS19820	SSF51905	FAD/NAD(P)-binding domain
RPE_RS19825	SSF46785	"Winged helix" DNA-binding domain
RPE_RS19825	SSF53850	Periplasmic binding protein-like II
RPE_RS19830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS19860	SSF90123	ABC transporter transmembrane region
RPE_RS19870	SSF47175	Cytochromes
RPE_RS19875	SSF53146	Nitrogenase accessory factor-like
RPE_RS19880	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS19885	SSF50022	ISP domain
RPE_RS19890	SSF46785	"Winged helix" DNA-binding domain
RPE_RS19895	SSF46785	"Winged helix" DNA-binding domain
RPE_RS19895	SSF53850	Periplasmic binding protein-like II
RPE_RS19900	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS19905	SSF52833	Thioredoxin-like
RPE_RS19915	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS19925	SSF51905	FAD/NAD(P)-binding domain
RPE_RS19930	SSF51905	FAD/NAD(P)-binding domain
RPE_RS19935	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS19935	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS19935	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS19940	SSF111369	HlyD-like secretion proteins
RPE_RS19945	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS19945	SSF52172	CheY-like
RPE_RS19950	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS19950	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS19955	SSF52151	FabD/lysophospholipase-like
RPE_RS19965	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS19965	SSF52172	CheY-like
RPE_RS19970	SSF56349	DNA breaking-rejoining enzymes
RPE_RS20000	SSF50494	Trypsin-like serine proteases
RPE_RS20015	SSF56112	Protein kinase-like (PK-like)
RPE_RS20060	SSF48295	TrpR-like
RPE_RS20075	SSF54427	NTF2-like
RPE_RS20095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20130	SSF53955	Lysozyme-like
RPE_RS20135	SSF51306	LexA/Signal peptidase
RPE_RS20150	SSF46955	Putative DNA-binding domain
RPE_RS20160	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS20185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20185	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS20190	SSF109709	KorB DNA-binding domain-like
RPE_RS20190	SSF110849	ParB/Sulfiredoxin
RPE_RS20205	SSF47729	IHF-like DNA-binding proteins
RPE_RS20215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20305	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS20305	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS20305	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS20315	SSF88723	PIN domain-like
RPE_RS20330	SSF46785	"Winged helix" DNA-binding domain
RPE_RS20330	SSF51206	cAMP-binding domain-like
RPE_RS20335	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS20340	SSF140683	SP0561-like
RPE_RS20345	SSF49503	Cupredoxins
RPE_RS20350	SSF56436	C-type lectin-like
RPE_RS20355	SSF53850	Periplasmic binding protein-like II
RPE_RS20360	SSF161098	MetI-like
RPE_RS20375	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS20380	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS20395	SSF161098	MetI-like
RPE_RS20400	SSF161098	MetI-like
RPE_RS20405	SSF50331	MOP-like
RPE_RS20405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20410	SSF141868	EAL domain-like
RPE_RS20410	SSF55073	Nucleotide cyclase
RPE_RS20410	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS20415	SSF51905	FAD/NAD(P)-binding domain
RPE_RS20430	SSF55073	Nucleotide cyclase
RPE_RS20435	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
RPE_RS20440	SSF51246	Rudiment single hybrid motif
RPE_RS20440	SSF52440	PreATP-grasp domain
RPE_RS20440	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS20450	SSF141371	PilZ domain-like
RPE_RS20470	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS20480	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS20480	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_RS20485	SSF81469	Bacterial aa3 type cytochrome c oxidase subunit IV
RPE_RS20490	SSF140931	Fic-like
RPE_RS20495	SSF89447	AbrB/MazE/MraZ-like
RPE_RS20500	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPE_RS20510	SSF46689	Homeodomain-like
RPE_RS20510	SSF52172	CheY-like
RPE_RS20510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20515	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS20515	SSF47090	PGBD-like
RPE_RS20520	SSF55166	Hedgehog/DD-peptidase
RPE_RS20530	SSF158757	SMc04008-like
RPE_RS20540	SSF50800	PK beta-barrel domain-like
RPE_RS20540	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS20540	SSF52935	PK C-terminal domain-like
RPE_RS20545	SSF143100	TTHA1013/TTHA0281-like
RPE_RS20550	SSF82784	OsmC-like
RPE_RS20555	SSF53474	alpha/beta-Hydrolases
RPE_RS20560	SSF48452	TPR-like
RPE_RS20565	SSF57840	Ribosomal protein L36
RPE_RS20575	SSF53850	Periplasmic binding protein-like II
RPE_RS20580	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS20585	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS20590	SSF46785	"Winged helix" DNA-binding domain
RPE_RS20590	SSF55781	GAF domain-like
RPE_RS20595	SSF51556	Metallo-dependent hydrolases
RPE_RS20600	SSF55826	YbaK/ProRS associated domain
RPE_RS20620	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS20620	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS20625	SSF52096	ClpP/crotonase
RPE_RS20630	SSF53098	Ribonuclease H-like
RPE_RS20635	SSF56112	Protein kinase-like (PK-like)
RPE_RS20670	SSF143120	YefM-like
RPE_RS20675	SSF88723	PIN domain-like
RPE_RS20695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20705	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS20710	SSF48695	Multiheme cytochromes
RPE_RS20715	SSF46626	Cytochrome c
RPE_RS20720	SSF141868	EAL domain-like
RPE_RS20720	SSF55073	Nucleotide cyclase
RPE_RS20720	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS20725	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS20730	SSF53271	PRTase-like
RPE_RS20735	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RPE_RS20735	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RPE_RS20735	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
RPE_RS20745	SSF51430	NAD(P)-linked oxidoreductase
RPE_RS20750	SSF55826	YbaK/ProRS associated domain
RPE_RS20760	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS20765	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS20765	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS20770	SSF158472	HAMP domain-like
RPE_RS20770	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS20775	SSF47240	Ferritin-like
RPE_RS20785	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS20790	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS20795	SSF143548	Serine metabolism enzymes domain
RPE_RS20795	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS20795	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_RS20795	SSF55021	ACT-like
RPE_RS20800	SSF53383	PLP-dependent transferases
RPE_RS20805	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS20810	SSF47616	GST C-terminal domain-like
RPE_RS20810	SSF52833	Thioredoxin-like
RPE_RS20815	SSF56925	OMPA-like
RPE_RS20820	SSF56925	OMPA-like
RPE_RS20825	SSF103473	MFS general substrate transporter
RPE_RS20830	SSF53738	Phosphoglucomutase, first 3 domains
RPE_RS20830	SSF55957	Phosphoglucomutase, C-terminal domain
RPE_RS20835	SSF51395	FMN-linked oxidoreductases
RPE_RS20840	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS20840	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RPE_RS20845	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS20850	SSF50447	Translation proteins
RPE_RS20850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20850	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS20850	SSF54980	EF-G C-terminal domain-like
RPE_RS20865	SSF53383	PLP-dependent transferases
RPE_RS20870	SSF47616	GST C-terminal domain-like
RPE_RS20870	SSF52833	Thioredoxin-like
RPE_RS20880	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPE_RS20885	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS20890	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPE_RS20895	SSF51430	NAD(P)-linked oxidoreductase
RPE_RS20910	SSF56784	HAD-like
RPE_RS20915	SSF47616	GST C-terminal domain-like
RPE_RS20915	SSF52833	Thioredoxin-like
RPE_RS20920	SSF47616	GST C-terminal domain-like
RPE_RS20920	SSF52833	Thioredoxin-like
RPE_RS20925	SSF47473	EF-hand
RPE_RS20930	SSF55718	SCP-like
RPE_RS20930	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS20940	SSF46600	C-terminal UvrC-binding domain of UvrB
RPE_RS20940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS20960	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS20965	SSF143100	TTHA1013/TTHA0281-like
RPE_RS20970	SSF54786	YcfA/nrd intein domain
RPE_RS20975	SSF53901	Thiolase-like
RPE_RS20980	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS20995	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21000	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21000	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RPE_RS21005	SSF55973	S-adenosylmethionine synthetase
RPE_RS21010	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS21015	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS21015	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21015	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
RPE_RS21020	SSF48452	TPR-like
RPE_RS21020	SSF52129	Caspase-like
RPE_RS21030	SSF51726	UROD/MetE-like
RPE_RS21035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21060	SSF53822	Periplasmic binding protein-like I
RPE_RS21075	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21080	SSF53328	Formyltransferase
RPE_RS21080	SSF55021	ACT-like
RPE_RS21085	SSF69618	HemD-like
RPE_RS21090	SSF53822	Periplasmic binding protein-like I
RPE_RS21105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21120	SSF56801	Acetyl-CoA synthetase-like
RPE_RS21125	SSF52980	Restriction endonuclease-like
RPE_RS21140	SSF53822	Periplasmic binding protein-like I
RPE_RS21145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21150	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS21155	SSF53720	ALDH-like
RPE_RS21160	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21165	SSF51269	AFP III-like domain
RPE_RS21165	SSF51569	Aldolase
RPE_RS21170	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS21175	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS21175	SSF52922	TK C-terminal domain-like
RPE_RS21180	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS21185	SSF56784	HAD-like
RPE_RS21190	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS21195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS21200	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS21210	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS21225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21235	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS21240	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS21245	SSF53383	PLP-dependent transferases
RPE_RS21250	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS21255	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21260	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS21265	SSF51182	RmlC-like cupins
RPE_RS21270	SSF51161	Trimeric LpxA-like enzymes
RPE_RS21285	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21290	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21300	SSF103473	MFS general substrate transporter
RPE_RS21320	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS21320	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS21330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21335	SSF52172	CheY-like
RPE_RS21340	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21345	SSF51182	RmlC-like cupins
RPE_RS21345	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS21360	SSF54001	Cysteine proteinases
RPE_RS21365	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS21365	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS21375	SSF53738	Phosphoglucomutase, first 3 domains
RPE_RS21375	SSF55957	Phosphoglucomutase, C-terminal domain
RPE_RS21380	SSF48208	Six-hairpin glycosidases
RPE_RS21385	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_RS21385	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS21390	SSF52172	CheY-like
RPE_RS21390	SSF52738	Methylesterase CheB, C-terminal domain
RPE_RS21395	SSF52172	CheY-like
RPE_RS21400	SSF50341	CheW-like
RPE_RS21405	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS21405	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS21405	SSF50341	CheW-like
RPE_RS21405	SSF52172	CheY-like
RPE_RS21405	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS21415	SSF56655	Carbohydrate phosphatase
RPE_RS21440	SSF46785	"Winged helix" DNA-binding domain
RPE_RS21445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21485	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS21490	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS21510	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS21510	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS21515	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS21520	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_RS21525	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS21525	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS21530	SSF48264	Cytochrome P450
RPE_RS21535	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS21535	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS21540	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21555	SSF90123	ABC transporter transmembrane region
RPE_RS21560	SSF50249	Nucleic acid-binding proteins
RPE_RS21570	SSF51730	FAD-linked oxidoreductase
RPE_RS21570	SSF53720	ALDH-like
RPE_RS21570	SSF81935	N-terminal domain of bifunctional PutA protein
RPE_RS21575	SSF89796	CoA-transferase family III (CaiB/BaiF)
RPE_RS21595	SSF140478	LemA-like
RPE_RS21600	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_RS21600	SSF56003	Molybdenum cofactor-binding domain
RPE_RS21605	SSF56801	Acetyl-CoA synthetase-like
RPE_RS21615	SSF56529	FAH
RPE_RS21620	SSF47616	GST C-terminal domain-like
RPE_RS21620	SSF52833	Thioredoxin-like
RPE_RS21625	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPE_RS21625	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPE_RS21630	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS21635	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS21650	SSF48113	Heme-dependent peroxidases
RPE_RS21685	SSF51261	Duplicated hybrid motif
RPE_RS21690	SSF101898	NHL repeat
RPE_RS21690	SSF63829	Calcium-dependent phosphotriesterase
RPE_RS21695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21695	SSF81923	Double Clp-N motif
RPE_RS21700	SSF54001	Cysteine proteinases
RPE_RS21705	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS21710	SSF53474	alpha/beta-Hydrolases
RPE_RS21715	SSF48600	Chorismate mutase II
RPE_RS21720	SSF53383	PLP-dependent transferases
RPE_RS21725	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS21725	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21735	SSF51182	RmlC-like cupins
RPE_RS21740	SSF143100	TTHA1013/TTHA0281-like
RPE_RS21745	SSF143865	CorA soluble domain-like
RPE_RS21745	SSF144083	Magnesium transport protein CorA, transmembrane region
RPE_RS21750	SSF141523	L,D-transpeptidase catalytic domain-like
RPE_RS21760	SSF56801	Acetyl-CoA synthetase-like
RPE_RS21765	SSF52980	Restriction endonuclease-like
RPE_RS21775	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS21780	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
RPE_RS21780	SSF56645	Acyl-CoA dehydrogenase NM domain-like
RPE_RS21785	SSF142695	RibA-like
RPE_RS21785	SSF55821	YrdC/RibB
RPE_RS21790	SSF69118	AhpD-like
RPE_RS21800	SSF46785	"Winged helix" DNA-binding domain
RPE_RS21800	SSF51206	cAMP-binding domain-like
RPE_RS21805	SSF50156	PDZ domain-like
RPE_RS21805	SSF50494	Trypsin-like serine proteases
RPE_RS21810	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS21815	SSF143975	IlvD/EDD N-terminal domain-like
RPE_RS21815	SSF52016	LeuD/IlvD-like
RPE_RS21825	SSF46785	"Winged helix" DNA-binding domain
RPE_RS21830	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
RPE_RS21830	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
RPE_RS21845	SSF52833	Thioredoxin-like
RPE_RS21860	SSF103088	OmpA-like
RPE_RS21870	SSF160104	Acetoacetate decarboxylase-like
RPE_RS21870	SSF51905	FAD/NAD(P)-binding domain
RPE_RS21875	SSF51905	FAD/NAD(P)-binding domain
RPE_RS21880	SSF48452	TPR-like
RPE_RS21880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21880	SSF55073	Nucleotide cyclase
RPE_RS21895	SSF55821	YrdC/RibB
RPE_RS21900	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_RS21900	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS21905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS21910	SSF143081	BB1717-like
RPE_RS21920	SSF55811	Nudix
RPE_RS21940	SSF51338	Composite domain of metallo-dependent hydrolases
RPE_RS21940	SSF51556	Metallo-dependent hydrolases
RPE_RS21945	SSF103025	Folate-binding domain
RPE_RS21950	SSF48150	DNA-glycosylase
RPE_RS21955	SSF109604	HD-domain/PDEase-like
RPE_RS21960	SSF52799	(Phosphotyrosine protein) phosphatases II
RPE_RS21965	SSF46785	"Winged helix" DNA-binding domain
RPE_RS21965	SSF55811	Nudix
RPE_RS21975	SSF55073	Nucleotide cyclase
RPE_RS21985	SSF50129	GroES-like
RPE_RS21985	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS21990	SSF142754	NadA-like
RPE_RS21995	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
RPE_RS21995	SSF51905	FAD/NAD(P)-binding domain
RPE_RS21995	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
RPE_RS22000	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
RPE_RS22000	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
RPE_RS22015	SSF51621	Phosphoenolpyruvate/pyruvate domain
RPE_RS22015	SSF52009	Phosphohistidine domain
RPE_RS22015	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS22030	SSF109604	HD-domain/PDEase-like
RPE_RS22035	SSF52980	Restriction endonuclease-like
RPE_RS22040	SSF55681	Class II aaRS and biotin synthetases
RPE_RS22050	SSF52096	ClpP/crotonase
RPE_RS22055	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS22060	SSF54913	GlnB-like
RPE_RS22065	SSF48576	Terpenoid synthases
RPE_RS22075	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS22075	SSF55060	GHMP Kinase, C-terminal domain
RPE_RS22080	SSF48452	TPR-like
RPE_RS22085	SSF51905	FAD/NAD(P)-binding domain
RPE_RS22085	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS22085	SSF54862	4Fe-4S ferredoxins
RPE_RS22090	SSF52141	Uracil-DNA glycosylase-like
RPE_RS22100	SSF53098	Ribonuclease H-like
RPE_RS22105	SSF102114	Radical SAM enzymes
RPE_RS22110	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS22115	SSF46785	"Winged helix" DNA-binding domain
RPE_RS22115	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS22120	SSF53218	Molybdenum cofactor biosynthesis proteins
RPE_RS22130	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS22140	SSF48150	DNA-glycosylase
RPE_RS22140	SSF55811	Nudix
RPE_RS22145	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS22155	SSF52833	Thioredoxin-like
RPE_RS22160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22175	SSF140478	LemA-like
RPE_RS22180	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS22185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22185	SSF75553	Smc hinge domain
RPE_RS22205	SSF52317	Class I glutamine amidotransferase-like
RPE_RS22205	SSF56322	ADC synthase
RPE_RS22215	SSF103084	Holliday junction resolvase RusA
RPE_RS22220	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS22225	SSF56112	Protein kinase-like (PK-like)
RPE_RS22235	SSF82057	Prokaryotic SH3-related domain
RPE_RS22245	SSF56801	Acetyl-CoA synthetase-like
RPE_RS22250	SSF48452	TPR-like
RPE_RS22255	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS22260	SSF46626	Cytochrome c
RPE_RS22265	SSF102114	Radical SAM enzymes
RPE_RS22280	SSF53850	Periplasmic binding protein-like II
RPE_RS22285	SSF53850	Periplasmic binding protein-like II
RPE_RS22290	SSF54001	Cysteine proteinases
RPE_RS22295	SSF141868	EAL domain-like
RPE_RS22295	SSF52172	CheY-like
RPE_RS22310	SSF48239	Terpenoid cyclases/Protein prenyltransferases
RPE_RS22325	SSF55811	Nudix
RPE_RS22330	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS22335	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS22350	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS22365	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RPE_RS22370	SSF52972	ITPase-like
RPE_RS22375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22380	SSF52788	Phosphotyrosine protein phosphatases I
RPE_RS22390	SSF53720	ALDH-like
RPE_RS22410	SSF55205	EPT/RTPC-like
RPE_RS22415	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS22420	SSF53474	alpha/beta-Hydrolases
RPE_RS22430	SSF53474	alpha/beta-Hydrolases
RPE_RS22435	SSF54909	Dimeric alpha+beta barrel
RPE_RS22440	SSF51206	cAMP-binding domain-like
RPE_RS22440	SSF51905	FAD/NAD(P)-binding domain
RPE_RS22445	SSF54427	NTF2-like
RPE_RS22455	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS22460	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS22470	SSF64518	Phase 1 flagellin
RPE_RS22475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22480	SSF54913	GlnB-like
RPE_RS22490	SSF101478	ADP-ribosylglycohydrolase
RPE_RS22490	SSF52799	(Phosphotyrosine protein) phosphatases II
RPE_RS22505	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS22510	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS22515	SSF143865	CorA soluble domain-like
RPE_RS22515	SSF144083	Magnesium transport protein CorA, transmembrane region
RPE_RS22520	SSF55811	Nudix
RPE_RS22535	SSF50331	MOP-like
RPE_RS22540	SSF52833	Thioredoxin-like
RPE_RS22545	SSF69118	AhpD-like
RPE_RS22550	SSF54862	4Fe-4S ferredoxins
RPE_RS22555	SSF51905	FAD/NAD(P)-binding domain
RPE_RS22555	SSF54373	FAD-linked reductases, C-terminal domain
RPE_RS22560	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS22560	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS22565	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS22575	SSF51569	Aldolase
RPE_RS22580	SSF53383	PLP-dependent transferases
RPE_RS22585	SSF117916	Fe-S cluster assembly (FSCA) domain-like
RPE_RS22585	SSF82649	SufE/NifU
RPE_RS22590	SSF89360	HesB-like domain
RPE_RS22600	SSF46548	alpha-helical ferredoxin
RPE_RS22615	SSF53146	Nitrogenase accessory factor-like
RPE_RS22620	SSF53807	"Helical backbone" metal receptor
RPE_RS22625	SSF53807	"Helical backbone" metal receptor
RPE_RS22630	SSF53807	"Helical backbone" metal receptor
RPE_RS22635	SSF53807	"Helical backbone" metal receptor
RPE_RS22640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22650	SSF159203	NifT/FixU-like
RPE_RS22665	SSF48452	TPR-like
RPE_RS22670	SSF89360	HesB-like domain
RPE_RS22675	SSF54862	4Fe-4S ferredoxins
RPE_RS22680	SSF102114	Radical SAM enzymes
RPE_RS22680	SSF53146	Nitrogenase accessory factor-like
RPE_RS22685	SSF54862	4Fe-4S ferredoxins
RPE_RS22690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22690	SSF55781	GAF domain-like
RPE_RS22695	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS22705	SSF56801	Acetyl-CoA synthetase-like
RPE_RS22710	SSF56918	Light-harvesting complex subunits
RPE_RS22715	SSF56918	Light-harvesting complex subunits
RPE_RS22720	SSF103190	Sensory domain-like
RPE_RS22720	SSF55073	Nucleotide cyclase
RPE_RS22730	SSF103473	MFS general substrate transporter
RPE_RS22735	SSF56784	HAD-like
RPE_RS22740	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS22750	SSF51126	Pectin lyase-like
RPE_RS22760	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS22760	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS22765	SSF74653	TolA/TonB C-terminal domain
RPE_RS22770	SSF81342	Transmembrane di-heme cytochromes
RPE_RS22775	SSF47473	EF-hand
RPE_RS22780	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS22780	SSF52172	CheY-like
RPE_RS22785	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS22785	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS22790	SSF103481	Multidrug resistance efflux transporter EmrE
RPE_RS22815	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS22820	SSF47741	CO dehydrogenase ISP C-domain like
RPE_RS22820	SSF54292	2Fe-2S ferredoxin-like
RPE_RS22825	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
RPE_RS22825	SSF56003	Molybdenum cofactor-binding domain
RPE_RS22830	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
RPE_RS22830	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS22835	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS22860	SSF143631	ApbE-like
RPE_RS22870	SSF56935	Porins
RPE_RS22885	SSF74653	TolA/TonB C-terminal domain
RPE_RS22890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22890	SSF81767	Pre-protein crosslinking domain of SecA
RPE_RS22890	SSF81886	Helical scaffold and wing domains of SecA
RPE_RS22900	SSF50182	Sm-like ribonucleoproteins
RPE_RS22910	SSF56801	Acetyl-CoA synthetase-like
RPE_RS22925	SSF103263	Chorismate synthase, AroC
RPE_RS22930	SSF53254	Phosphoglycerate mutase-like
RPE_RS22935	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS22940	SSF46565	Chaperone J-domain
RPE_RS22940	SSF49493	HSP40/DnaJ peptide-binding domain
RPE_RS22950	SSF50475	FMN-binding split barrel
RPE_RS22955	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS22965	SSF141130	Acetamidase/Formamidase-like
RPE_RS22970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS22990	SSF53822	Periplasmic binding protein-like I
RPE_RS22995	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS22995	SSF52172	CheY-like
RPE_RS22995	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS23000	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS23000	SSF52172	CheY-like
RPE_RS23020	SSF58113	Apolipoprotein A-I
RPE_RS23025	SSF56801	Acetyl-CoA synthetase-like
RPE_RS23035	SSF46785	"Winged helix" DNA-binding domain
RPE_RS23035	SSF51206	cAMP-binding domain-like
RPE_RS23040	SSF51246	Rudiment single hybrid motif
RPE_RS23040	SSF52440	PreATP-grasp domain
RPE_RS23040	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS23045	SSF55961	Bet v1-like
RPE_RS23050	SSF46785	"Winged helix" DNA-binding domain
RPE_RS23060	SSF53474	alpha/beta-Hydrolases
RPE_RS23070	SSF53067	Actin-like ATPase domain
RPE_RS23075	SSF51445	(Trans)glycosidases
RPE_RS23080	SSF51445	(Trans)glycosidases
RPE_RS23090	SSF56601	beta-lactamase/transpeptidase-like
RPE_RS23110	SSF56784	HAD-like
RPE_RS23110	SSF81653	Calcium ATPase, transduction domain A
RPE_RS23110	SSF81665	Calcium ATPase, transmembrane domain M
RPE_RS23120	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS23120	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS23120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23120	SSF55781	GAF domain-like
RPE_RS23120	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS23125	SSF52172	CheY-like
RPE_RS23130	SSF46785	"Winged helix" DNA-binding domain
RPE_RS23130	SSF51206	cAMP-binding domain-like
RPE_RS23135	SSF48452	TPR-like
RPE_RS23135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23135	SSF55073	Nucleotide cyclase
RPE_RS23140	SSF48264	Cytochrome P450
RPE_RS23150	SSF54909	Dimeric alpha+beta barrel
RPE_RS23160	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS23160	SSF55234	Cyanase C-terminal domain
RPE_RS23165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23170	SSF161098	MetI-like
RPE_RS23175	SSF53850	Periplasmic binding protein-like II
RPE_RS23180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23180	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS23190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23195	SSF50494	Trypsin-like serine proteases
RPE_RS23205	SSF50494	Trypsin-like serine proteases
RPE_RS23205	SSF56024	Phospholipase D/nuclease
RPE_RS23210	SSF103473	MFS general substrate transporter
RPE_RS23220	SSF53927	Cytidine deaminase-like
RPE_RS23225	SSF50692	ADC-like
RPE_RS23225	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
RPE_RS23225	SSF54292	2Fe-2S ferredoxin-like
RPE_RS23225	SSF54862	4Fe-4S ferredoxins
RPE_RS23230	SSF140490	Nqo1C-terminal domain-like
RPE_RS23230	SSF142019	Nqo1 FMN-binding domain-like
RPE_RS23230	SSF142984	Nqo1 middle domain-like
RPE_RS23230	SSF52833	Thioredoxin-like
RPE_RS23235	SSF52833	Thioredoxin-like
RPE_RS23240	SSF46785	"Winged helix" DNA-binding domain
RPE_RS23240	SSF53850	Periplasmic binding protein-like II
RPE_RS23245	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS23245	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS23245	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS23250	SSF111369	HlyD-like secretion proteins
RPE_RS23255	SSF46785	"Winged helix" DNA-binding domain
RPE_RS23270	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS23270	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS23275	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS23275	SSF52172	CheY-like
RPE_RS23280	SSF81342	Transmembrane di-heme cytochromes
RPE_RS23285	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
RPE_RS23285	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
RPE_RS23285	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RPE_RS23290	SSF111369	HlyD-like secretion proteins
RPE_RS23305	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS23310	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS23320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23325	SSF111369	HlyD-like secretion proteins
RPE_RS23330	SSF46689	Homeodomain-like
RPE_RS23330	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS23335	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS23340	SSF52172	CheY-like
RPE_RS23340	SSF52738	Methylesterase CheB, C-terminal domain
RPE_RS23345	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RPE_RS23345	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS23350	SSF50341	CheW-like
RPE_RS23355	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS23360	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS23365	SSF50341	CheW-like
RPE_RS23370	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RPE_RS23370	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS23370	SSF50341	CheW-like
RPE_RS23370	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS23375	SSF52172	CheY-like
RPE_RS23380	SSF52091	SpoIIaa-like
RPE_RS23385	SSF50129	GroES-like
RPE_RS23385	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS23390	SSF51316	Mss4-like
RPE_RS23395	SSF53474	alpha/beta-Hydrolases
RPE_RS23400	SSF52964	TolB, N-terminal domain
RPE_RS23405	SSF53822	Periplasmic binding protein-like I
RPE_RS23410	SSF50974	Nitrous oxide reductase, N-terminal domain
RPE_RS23415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23435	SSF90123	ABC transporter transmembrane region
RPE_RS23450	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS23450	SSF54862	4Fe-4S ferredoxins
RPE_RS23455	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_RS23455	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS23460	SSF55103	FAD-linked oxidases, C-terminal domain
RPE_RS23460	SSF56176	FAD-binding/transporter-associated domain-like
RPE_RS23465	SSF46689	Homeodomain-like
RPE_RS23465	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS23480	SSF140990	FtsH protease domain-like
RPE_RS23480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23485	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS23490	SSF48452	TPR-like
RPE_RS23495	SSF103088	OmpA-like
RPE_RS23500	SSF46689	Homeodomain-like
RPE_RS23500	SSF51182	RmlC-like cupins
RPE_RS23505	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS23510	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS23515	SSF141868	EAL domain-like
RPE_RS23515	SSF55073	Nucleotide cyclase
RPE_RS23520	SSF52964	TolB, N-terminal domain
RPE_RS23520	SSF69304	Tricorn protease N-terminal domain
RPE_RS23525	SSF74653	TolA/TonB C-terminal domain
RPE_RS23550	SSF46689	Homeodomain-like
RPE_RS23550	SSF48498	Tetracyclin repressor-like, C-terminal domain
RPE_RS23555	SSF54909	Dimeric alpha+beta barrel
RPE_RS23560	SSF54427	NTF2-like
RPE_RS23565	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS23570	SSF143120	YefM-like
RPE_RS23575	SSF56655	Carbohydrate phosphatase
RPE_RS23580	SSF81901	HCP-like
RPE_RS23585	SSF51391	Thiamin phosphate synthase
RPE_RS23590	SSF51569	Aldolase
RPE_RS23595	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RPE_RS23605	SSF53748	Phosphoglycerate kinase
RPE_RS23620	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS23620	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RPE_RS23625	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RPE_RS23625	SSF52922	TK C-terminal domain-like
RPE_RS23635	SSF102829	Cell division protein ZapA-like
RPE_RS23650	SSF54909	Dimeric alpha+beta barrel
RPE_RS23655	SSF48452	TPR-like
RPE_RS23655	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RPE_RS23655	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RPE_RS23660	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RPE_RS23665	SSF103473	MFS general substrate transporter
RPE_RS23685	SSF55718	SCP-like
RPE_RS23690	SSF143968	UbiD C-terminal domain-like
RPE_RS23690	SSF50475	FMN-binding split barrel
RPE_RS23695	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RPE_RS23710	SSF47413	lambda repressor-like DNA-binding domains
RPE_RS23715	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
RPE_RS23720	SSF46689	Homeodomain-like
RPE_RS23735	SSF49503	Cupredoxins
RPE_RS23735	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
RPE_RS23740	SSF81442	Cytochrome c oxidase subunit I-like
RPE_RS23755	SSF110111	Ctag/Cox11
RPE_RS23760	SSF81452	Cytochrome c oxidase subunit III-like
RPE_RS23775	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
RPE_RS23780	SSF63411	LuxS/MPP-like metallohydrolase
RPE_RS23785	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS23795	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS23820	SSF46785	"Winged helix" DNA-binding domain
RPE_RS23820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23825	SSF53927	Cytidine deaminase-like
RPE_RS23830	SSF46929	DNA helicase RuvA subunit, C-terminal domain
RPE_RS23830	SSF47781	RuvA domain 2-like
RPE_RS23830	SSF50249	Nucleic acid-binding proteins
RPE_RS23835	SSF53098	Ribonuclease H-like
RPE_RS23840	SSF75625	YebC-like
RPE_RS23845	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RPE_RS23850	SSF102114	Radical SAM enzymes
RPE_RS23855	SSF56300	Metallo-dependent phosphatases
RPE_RS23860	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS23875	SSF81333	F1F0 ATP synthase subunit C
RPE_RS23880	SSF81336	F1F0 ATP synthase subunit A
RPE_RS23890	SSF52833	Thioredoxin-like
RPE_RS23900	SSF111038	YjbQ-like
RPE_RS23905	SSF103473	MFS general substrate transporter
RPE_RS23910	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS23910	SSF52172	CheY-like
RPE_RS23915	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS23915	SSF52172	CheY-like
RPE_RS23915	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS23915	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS23920	SSF53383	PLP-dependent transferases
RPE_RS23925	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS23930	SSF56925	OMPA-like
RPE_RS23940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23945	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RPE_RS23950	SSF53807	"Helical backbone" metal receptor
RPE_RS23955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS23955	SSF90002	Hypothetical protein YjiA, C-terminal domain
RPE_RS23960	SSF50998	Quinoprotein alcohol dehydrogenase-like
RPE_RS23985	SSF55298	YjgF-like
RPE_RS23990	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RPE_RS23995	SSF50621	Alanine racemase C-terminal domain-like
RPE_RS23995	SSF51419	PLP-binding barrel
RPE_RS24005	SSF55486	Metalloproteases ("zincins"), catalytic domain
RPE_RS24020	SSF53800	Chelatase
RPE_RS24025	SSF117892	Band 7/SPFH domain
RPE_RS24040	SSF111304	Recombination protein RecR
RPE_RS24045	SSF82607	YbaB-like
RPE_RS24050	SSF48019	post-AAA+ oligomerization domain-like
RPE_RS24050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS24055	SSF54197	HIT-like
RPE_RS24060	SSF55811	Nudix
RPE_RS24065	SSF53613	Ribokinase-like
RPE_RS24070	SSF50630	Acid proteases
RPE_RS24075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS24090	SSF47807	5' to 3' exonuclease, C-terminal subdomain
RPE_RS24090	SSF53098	Ribonuclease H-like
RPE_RS24090	SSF56672	DNA/RNA polymerases
RPE_RS24090	SSF88723	PIN domain-like
RPE_RS24095	SSF53271	PRTase-like
RPE_RS24110	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS24115	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RPE_RS24120	SSF110857	Gamma-glutamyl cyclotransferase-like
RPE_RS24125	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RPE_RS24140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS24150	SSF52172	CheY-like
RPE_RS24155	SSF53383	PLP-dependent transferases
RPE_RS24160	SSF56059	Glutathione synthetase ATP-binding domain-like
RPE_RS24165	SSF53383	PLP-dependent transferases
RPE_RS24175	SSF69118	AhpD-like
RPE_RS24180	SSF50621	Alanine racemase C-terminal domain-like
RPE_RS24180	SSF51419	PLP-binding barrel
RPE_RS24190	SSF48557	L-aspartase-like
RPE_RS24195	SSF52833	Thioredoxin-like
RPE_RS24200	SSF54909	Dimeric alpha+beta barrel
RPE_RS24215	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RPE_RS24215	SSF51735	NAD(P)-binding Rossmann-fold domains
RPE_RS24220	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS24220	SSF52467	DHS-like NAD/FAD-binding domain
RPE_RS24225	SSF52402	Adenine nucleotide alpha hydrolases-like
RPE_RS24230	SSF89028	Cobalamin adenosyltransferase-like
RPE_RS24245	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS24245	SSF52172	CheY-like
RPE_RS24245	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS24250	SSF52374	Nucleotidylyl transferase
RPE_RS24255	SSF48150	DNA-glycosylase
RPE_RS24270	SSF56281	Metallo-hydrolase/oxidoreductase
RPE_RS24280	SSF47598	Ribbon-helix-helix
RPE_RS24290	SSF52172	CheY-like
RPE_RS24295	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS24295	SSF52172	CheY-like
RPE_RS24295	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS24295	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS24305	SSF50346	PRC-barrel domain
RPE_RS24310	SSF51011	Glycosyl hydrolase domain
RPE_RS24310	SSF51445	(Trans)glycosidases
RPE_RS24325	SSF81301	Nucleotidyltransferase
RPE_RS24335	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RPE_RS24335	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
RPE_RS24345	SSF50952	Soluble quinoprotein glucose dehydrogenase
RPE_RS24350	SSF56300	Metallo-dependent phosphatases
RPE_RS24355	SSF52980	Restriction endonuclease-like
RPE_RS24360	SSF52980	Restriction endonuclease-like
RPE_RS24365	SSF81301	Nucleotidyltransferase
RPE_RS24370	SSF51283	dUTPase-like
RPE_RS24375	SSF53383	PLP-dependent transferases
RPE_RS24380	SSF52266	SGNH hydrolase
RPE_RS24385	SSF52266	SGNH hydrolase
RPE_RS24395	SSF110069	ApaG-like
RPE_RS24400	SSF118352	HSP33 redox switch-like
RPE_RS24400	SSF64397	Hsp33 domain
RPE_RS24405	SSF53671	Aspartate/ornithine carbamoyltransferase
RPE_RS24410	SSF53383	PLP-dependent transferases
RPE_RS24420	SSF46894	C-terminal effector domain of the bipartite response regulators
RPE_RS24420	SSF52172	CheY-like
RPE_RS24425	SSF109755	PhoU-like
RPE_RS24430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS24435	SSF161098	MetI-like
RPE_RS24440	SSF161098	MetI-like
RPE_RS24445	SSF53850	Periplasmic binding protein-like II
RPE_RS24450	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS24450	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS24450	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS24465	SSF103088	OmpA-like
RPE_RS24470	SSF88713	Glycoside hydrolase/deacetylase
RPE_RS24475	SSF110942	HSP90 C-terminal domain
RPE_RS24475	SSF54211	Ribosomal protein S5 domain 2-like
RPE_RS24475	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS24480	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS24485	SSF52172	CheY-like
RPE_RS24495	SSF81342	Transmembrane di-heme cytochromes
RPE_RS24520	SSF100950	NagB/RpiA/CoA transferase-like
RPE_RS24525	SSF53167	Purine and uridine phosphorylases
RPE_RS24530	SSF56796	Dehydroquinate synthase-like
RPE_RS24540	SSF53850	Periplasmic binding protein-like II
RPE_RS24545	SSF56801	Acetyl-CoA synthetase-like
RPE_RS24550	SSF47819	HRDC-like
RPE_RS24550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS24565	SSF109604	HD-domain/PDEase-like
RPE_RS24565	SSF52172	CheY-like
RPE_RS24580	SSF55068	Peptide methionine sulfoxide reductase
RPE_RS24590	SSF46992	Ribosomal protein S20
RPE_RS24620	SSF103088	OmpA-like
RPE_RS24625	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS24630	SSF141868	EAL domain-like
RPE_RS24630	SSF55073	Nucleotide cyclase
RPE_RS24635	SSF53098	Ribonuclease H-like
RPE_RS24640	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS24665	SSF46689	Homeodomain-like
RPE_RS24665	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS24690	SSF141868	EAL domain-like
RPE_RS24690	SSF55073	Nucleotide cyclase
RPE_RS24690	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS24695	SSF52129	Caspase-like
RPE_RS24710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RPE_RS24715	SSF74653	TolA/TonB C-terminal domain
RPE_RS24720	SSF54523	Pili subunits
RPE_RS24730	SSF48452	TPR-like
RPE_RS24730	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RPE_RS24735	SSF53474	alpha/beta-Hydrolases
RPE_RS24740	SSF54909	Dimeric alpha+beta barrel
RPE_RS24750	SSF74653	TolA/TonB C-terminal domain
RPE_RS24760	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS24765	SSF55073	Nucleotide cyclase
RPE_RS24770	SSF103190	Sensory domain-like
RPE_RS24785	SSF47384	Homodimeric domain of signal transducing histidine kinase
RPE_RS24785	SSF52172	CheY-like
RPE_RS24785	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS24785	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RPE_RS24795	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RPE_RS24795	SSF53448	Nucleotide-diphospho-sugar transferases
RPE_RS24800	SSF46689	Homeodomain-like
RPE_RS24800	SSF51182	RmlC-like cupins
RPE_RS24805	SSF50494	Trypsin-like serine proteases
RPE_RS24805	SSF52743	Subtilisin-like
RPE_RS24810	SSF141868	EAL domain-like
RPE_RS24810	SSF55073	Nucleotide cyclase
RPE_RS24810	SSF55785	PYP-like sensor domain (PAS domain)
RPE_RS24825	SSF81901	HCP-like