locus-tag class description F11_RS00005 PF11638 DnaA N-terminal domain F11_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix F11_RS00005 PF00308 Bacterial dnaA protein F11_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain F11_RS00010 PF02767 DNA polymerase III beta subunit, central domain F11_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain F11_RS00015 PF02463 RecF/RecN/SMC N terminal domain F11_RS00020 PF01751 Toprim domain F11_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus F11_RS00020 PF00204 DNA gyrase B F11_RS00045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F11_RS00050 PF04963 Sigma-54 factor, core binding domain F11_RS00050 PF00309 Sigma-54 factor, Activator interacting domain (AID) F11_RS00050 PF04552 Sigma-54, DNA binding domain F11_RS00055 PF00005 ABC transporter F11_RS00070 PF01380 SIS domain F11_RS00070 PF00571 CBS domain F11_RS00090 PF02673 Bacitracin resistance protein BacA F11_RS00095 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F11_RS00095 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS00100 PF00310 Glutamine amidotransferases class-II F11_RS00100 PF04898 Glutamate synthase central domain F11_RS00100 PF01645 Conserved region in glutamate synthase F11_RS00100 PF01493 GXGXG motif F11_RS00105 PF00255 Glutathione peroxidase F11_RS00110 PF01047 MarR family F11_RS00115 PF13417 Glutathione S-transferase, N-terminal domain F11_RS00115 PF00043 Glutathione S-transferase, C-terminal domain F11_RS00125 PF00595 PDZ domain F11_RS00125 PF13180 PDZ domain F11_RS00140 PF00912 Transglycosylase F11_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS00160 PF03466 LysR substrate binding domain F11_RS00170 PF03918 Cytochrome C biogenesis protein F11_RS00175 PF08534 Redoxin F11_RS00180 PF01578 Cytochrome C assembly protein F11_RS00180 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F11_RS00185 PF03100 CcmE F11_RS00195 PF01578 Cytochrome C assembly protein F11_RS00200 PF03379 CcmB protein F11_RS00205 PF00005 ABC transporter F11_RS00220 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F11_RS00220 PF00132 Bacterial transferase hexapeptide (six repeats) F11_RS00225 PF00550 Phosphopantetheine attachment site F11_RS00230 PF00109 Beta-ketoacyl synthase, N-terminal domain F11_RS00230 PF02801 Beta-ketoacyl synthase, C-terminal domain F11_RS00240 PF12848 ABC transporter F11_RS00240 PF00005 ABC transporter F11_RS00245 PF01810 LysE type translocator F11_RS00250 PF02785 Biotin carboxylase C-terminal domain F11_RS00250 PF00289 Biotin carboxylase, N-terminal domain F11_RS00250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F11_RS00250 PF00364 Biotin-requiring enzyme F11_RS00260 PF01039 Carboxyl transferase domain F11_RS00265 PF02785 Biotin carboxylase C-terminal domain F11_RS00265 PF18140 Propionyl-coenzyme A carboxylase BT domain F11_RS00265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F11_RS00265 PF00364 Biotin-requiring enzyme F11_RS00265 PF00289 Biotin carboxylase, N-terminal domain F11_RS00270 PF01039 Carboxyl transferase domain F11_RS00275 PF02779 Transketolase, pyrimidine binding domain F11_RS00275 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F11_RS00275 PF02780 Transketolase, C-terminal domain F11_RS00295 PF01370 NAD dependent epimerase/dehydratase family F11_RS00300 PF02401 LytB protein F11_RS00305 PF04055 Radical SAM superfamily F11_RS00305 PF06463 Molybdenum Cofactor Synthesis C F11_RS00310 PF01048 Phosphorylase superfamily F11_RS00315 PF13249 Squalene-hopene cyclase N-terminal domain F11_RS00315 PF13243 Squalene-hopene cyclase C-terminal domain F11_RS00320 PF01593 Flavin containing amine oxidoreductase F11_RS00335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS00335 PF00512 His Kinase A (phospho-acceptor) domain F11_RS00335 PF00989 PAS fold F11_RS00345 PF12146 Serine aminopeptidase, S33 F11_RS00350 PF00005 ABC transporter F11_RS00360 PF00892 EamA-like transporter family F11_RS00370 PF00183 Hsp90 protein F11_RS00385 PF01479 S4 domain F11_RS00395 PF00037 4Fe-4S binding domain F11_RS00395 PF11953 Domain of unknown function (DUF3470) F11_RS00410 PF05227 CHASE3 domain F11_RS00410 PF00672 HAMP domain F11_RS00410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS00415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS00415 PF12729 Four helix bundle sensory module for signal transduction F11_RS00415 PF00672 HAMP domain F11_RS00425 PF00561 alpha/beta hydrolase fold F11_RS00430 PF00990 Diguanylate cyclase, GGDEF domain F11_RS00435 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F11_RS00445 PF00107 Zinc-binding dehydrogenase F11_RS00445 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS00450 PF00270 DEAD/DEAH box helicase F11_RS00450 PF00271 Helicase conserved C-terminal domain F11_RS00450 PF00570 HRDC domain F11_RS00450 PF16124 RecQ zinc-binding F11_RS00450 PF09382 RQC domain F11_RS00465 PF01547 Bacterial extracellular solute-binding protein F11_RS00470 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS00475 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS00480 PF08402 TOBE domain F11_RS00480 PF00005 ABC transporter F11_RS00485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F11_RS00490 PF00472 RF-1 domain F11_RS00495 PF01053 Cys/Met metabolism PLP-dependent enzyme F11_RS00500 PF07228 Stage II sporulation protein E (SpoIIE) F11_RS00500 PF00672 HAMP domain F11_RS00515 PF01590 GAF domain F11_RS00515 PF00563 EAL domain F11_RS00515 PF00990 Diguanylate cyclase, GGDEF domain F11_RS00515 PF00360 Phytochrome region F11_RS00520 PF04102 SlyX F11_RS00530 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain F11_RS00530 PF07678 A-macroglobulin TED domain F11_RS00530 PF01835 MG2 domain F11_RS00530 PF00207 Alpha-2-macroglobulin family F11_RS00530 PF11974 Bacterial alpha-2-macroglobulin MG3 domain F11_RS00530 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain F11_RS00530 PF17962 Bacterial macroglobulin domain 6 F11_RS00530 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain F11_RS00530 PF07703 Alpha-2-macroglobulin bait region domain F11_RS00535 PF00905 Penicillin binding protein transpeptidase domain F11_RS00535 PF06832 Penicillin-Binding Protein C-terminus Family F11_RS00535 PF00912 Transglycosylase F11_RS00545 PF01471 Putative peptidoglycan binding domain F11_RS00545 PF13401 AAA domain F11_RS00550 PF06750 Bacterial Peptidase A24 N-terminal domain F11_RS00550 PF01478 Type IV leader peptidase family F11_RS00555 PF03958 Bacterial type II/III secretion system short domain F11_RS00555 PF00263 Bacterial type II and III secretion system protein F11_RS00575 PF00437 Type II/IV secretion system protein F11_RS00575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F11_RS00580 PF00482 Type II secretion system (T2SS), protein F F11_RS00595 PF00005 ABC transporter F11_RS00600 PF00437 Type II/IV secretion system protein F11_RS00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS00610 PF01590 GAF domain F11_RS00625 PF01467 Cytidylyltransferase-like F11_RS00625 PF00294 pfkB family carbohydrate kinase F11_RS00640 PF00005 ABC transporter F11_RS00650 PF06965 Na+/H+ antiporter 1 F11_RS00665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS00665 PF17200 Single Cache domain 2 F11_RS00665 PF00672 HAMP domain F11_RS00670 PF11849 Domain of unknown function (DUF3369) F11_RS00680 PF13439 Glycosyltransferase Family 4 F11_RS00680 PF00534 Glycosyl transferases group 1 F11_RS00685 PF00171 Aldehyde dehydrogenase family F11_RS00700 PF16868 NMT1-like family F11_RS00705 PF12404 Peptidase F11_RS00705 PF00883 Cytosol aminopeptidase family, catalytic domain F11_RS00720 PF00490 Delta-aminolevulinic acid dehydratase F11_RS00735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F11_RS00745 PF00719 Inorganic pyrophosphatase F11_RS00750 PF07690 Major Facilitator Superfamily F11_RS00755 PF00679 Elongation factor G C-terminus F11_RS00755 PF03144 Elongation factor Tu domain 2 F11_RS00755 PF00009 Elongation factor Tu GTP binding domain F11_RS00760 PF00294 pfkB family carbohydrate kinase F11_RS00780 PF00730 HhH-GPD superfamily base excision DNA repair protein F11_RS00785 PF01113 Dihydrodipicolinate reductase, N-terminus F11_RS00785 PF05173 Dihydrodipicolinate reductase, C-terminus F11_RS00790 PF00440 Bacterial regulatory proteins, tetR family F11_RS00795 PF13533 Biotin-lipoyl like F11_RS00800 PF07690 Major Facilitator Superfamily F11_RS00805 PF08269 Cache domain F11_RS00805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS00810 PF02601 Exonuclease VII, large subunit F11_RS00810 PF13742 OB-fold nucleic acid binding domain F11_RS00815 PF06233 Usg-like family F11_RS00820 PF00166 Chaperonin 10 Kd subunit F11_RS00825 PF00118 TCP-1/cpn60 chaperonin family F11_RS00835 PF00916 Sulfate permease family F11_RS00835 PF01740 STAS domain F11_RS00875 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) F11_RS00880 PF01867 CRISPR associated protein Cas1 F11_RS00890 PF09704 CRISPR-associated protein (Cas_Cas5) F11_RS00895 PF09344 CT1975-like protein F11_RS00910 PF00270 DEAD/DEAH box helicase F11_RS00910 PF00271 Helicase conserved C-terminal domain F11_RS00910 PF18019 HD domain F11_RS00915 PF00202 Aminotransferase class-III F11_RS00925 PF09827 CRISPR associated protein Cas2 F11_RS00930 PF01930 Domain of unknown function DUF83 F11_RS00930 PF01867 CRISPR associated protein Cas1 F11_RS00975 PF00664 ABC transporter transmembrane region F11_RS00975 PF00005 ABC transporter F11_RS00975 PF08021 Siderophore-interacting FAD-binding domain F11_RS00975 PF04954 Siderophore-interacting protein F11_RS00980 PF04954 Siderophore-interacting protein F11_RS00980 PF00664 ABC transporter transmembrane region F11_RS00980 PF00005 ABC transporter F11_RS00980 PF08021 Siderophore-interacting FAD-binding domain F11_RS00985 PF00593 TonB dependent receptor F11_RS00985 PF07715 TonB-dependent Receptor Plug Domain F11_RS00990 PF02261 Aspartate decarboxylase F11_RS00995 PF01554 MatE F11_RS01000 PF00109 Beta-ketoacyl synthase, N-terminal domain F11_RS01000 PF02801 Beta-ketoacyl synthase, C-terminal domain F11_RS01040 PF13091 PLD-like domain F11_RS01040 PF13396 Phospholipase_D-nuclease N-terminal F11_RS01055 PF00226 DnaJ domain F11_RS01060 PF08406 CbbQ/NirQ/NorQ C-terminal F11_RS01060 PF07728 AAA domain (dynein-related subfamily) F11_RS01060 PF12556 Cobaltochelatase CobS subunit N terminal F11_RS01065 PF11775 Cobalamin biosynthesis protein CobT VWA domain F11_RS01065 PF06213 Cobalamin biosynthesis protein CobT F11_RS01070 PF12419 SNF2 Helicase protein F11_RS01070 PF00271 Helicase conserved C-terminal domain F11_RS01070 PF00176 SNF2 family N-terminal domain F11_RS01080 PF00830 Ribosomal L28 family F11_RS01110 PF01037 Lrp/AsnC ligand binding domain F11_RS01115 PF03328 HpcH/HpaI aldolase/citrate lyase family F11_RS01120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F11_RS01135 PF00162 Phosphoglycerate kinase F11_RS01140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F11_RS01140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F11_RS01145 PF03976 Polyphosphate kinase 2 (PPK2) F11_RS01150 PF12544 Lysine-2,3-aminomutase F11_RS01150 PF04055 Radical SAM superfamily F11_RS01155 PF01966 HD domain F11_RS01160 PF07690 Major Facilitator Superfamily F11_RS01175 PF00534 Glycosyl transferases group 1 F11_RS01175 PF13439 Glycosyltransferase Family 4 F11_RS01180 PF13537 Glutamine amidotransferase domain F11_RS01180 PF00733 Asparagine synthase F11_RS01205 PF02810 SEC-C motif F11_RS01205 PF07517 SecA DEAD-like domain F11_RS01205 PF01043 SecA preprotein cross-linking domain F11_RS01205 PF07516 SecA Wing and Scaffold domain F11_RS01210 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F11_RS01230 PF00293 NUDIX domain F11_RS01230 PF09297 NADH pyrophosphatase zinc ribbon domain F11_RS01235 PF01555 DNA methylase F11_RS01245 PF01189 16S rRNA methyltransferase RsmB/F F11_RS01245 PF01029 NusB family F11_RS01250 PF00571 CBS domain F11_RS01250 PF00478 IMP dehydrogenase / GMP reductase domain F11_RS01255 PF01728 FtsJ-like methyltransferase F11_RS01260 PF02541 Ppx/GppA phosphatase family F11_RS01260 PF01761 3-dehydroquinate synthase F11_RS01270 PF13407 Periplasmic binding protein domain F11_RS01275 PF02653 Branched-chain amino acid transport system / permease component F11_RS01280 PF00005 ABC transporter F11_RS01285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F11_RS01285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F11_RS01290 PF12833 Helix-turn-helix domain F11_RS01295 PF00107 Zinc-binding dehydrogenase F11_RS01295 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS01300 PF16363 GDP-mannose 4,6 dehydratase F11_RS01305 PF01370 NAD dependent epimerase/dehydratase family F11_RS01320 PF05987 Bacterial protein of unknown function (DUF898) F11_RS01330 PF02554 Carbon starvation protein CstA F11_RS01330 PF13722 5TM C-terminal transporter carbon starvation CstA F11_RS01335 PF04328 Selenoprotein, putative F11_RS01350 PF08544 GHMP kinases C terminal F11_RS01350 PF00288 GHMP kinases N terminal domain F11_RS01365 PF03167 Uracil DNA glycosylase superfamily F11_RS01370 PF01551 Peptidase family M23 F11_RS01370 PF10145 Phage-related minor tail protein F11_RS01370 PF01464 Transglycosylase SLT domain F11_RS01375 PF00994 Probable molybdopterin binding domain F11_RS01385 PF04379 ApaG domain F11_RS01390 PF01227 GTP cyclohydrolase I F11_RS01395 PF00893 Small Multidrug Resistance protein F11_RS01405 PF02803 Thiolase, C-terminal domain F11_RS01405 PF00108 Thiolase, N-terminal domain F11_RS01415 PF07879 PHB/PHA accumulation regulator DNA-binding domain F11_RS01415 PF05233 PHB accumulation regulatory domain F11_RS01425 PF01381 Helix-turn-helix F11_RS01430 PF08331 Domain of unknown function (DUF1730) F11_RS01435 PF01702 Queuine tRNA-ribosyltransferase F11_RS01440 PF02547 Queuosine biosynthesis protein F11_RS01445 PF02659 Putative manganese efflux pump F11_RS01455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F11_RS01455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F11_RS01455 PF00205 Thiamine pyrophosphate enzyme, central domain F11_RS01460 PF00171 Aldehyde dehydrogenase family F11_RS01475 PF00248 Aldo/keto reductase family F11_RS01480 PF09297 NADH pyrophosphatase zinc ribbon domain F11_RS01480 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain F11_RS01480 PF00293 NUDIX domain F11_RS01495 PF00216 Bacterial DNA-binding protein F11_RS01500 PF00575 S1 RNA binding domain F11_RS01505 PF02224 Cytidylate kinase F11_RS01510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F11_RS01530 PF00756 Putative esterase F11_RS01535 PF00171 Aldehyde dehydrogenase family F11_RS01540 PF00117 Glutamine amidotransferase class-I F11_RS01540 PF00958 GMP synthase C terminal domain F11_RS01555 PF02492 CobW/HypB/UreG, nucleotide-binding domain F11_RS01570 PF00586 AIR synthase related protein, N-terminal domain F11_RS01570 PF02769 AIR synthase related protein, C-terminal domain F11_RS01575 PF01924 Hydrogenase formation hypA family F11_RS01580 PF01455 HupF/HypC family F11_RS01585 PF07503 HypF finger F11_RS01585 PF01300 Telomere recombination F11_RS01585 PF00708 Acylphosphatase F11_RS01585 PF17788 HypF Kae1-like domain F11_RS01590 PF12800 4Fe-4S binding domain F11_RS01590 PF13247 4Fe-4S dicluster domain F11_RS01595 PF00037 4Fe-4S binding domain F11_RS01595 PF02906 Iron only hydrogenase large subunit, C-terminal domain F11_RS01595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F11_RS01595 PF02256 Iron hydrogenase small subunit F11_RS01600 PF01226 Formate/nitrite transporter F11_RS01610 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain F11_RS01610 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 F11_RS01615 PF00361 Proton-conducting membrane transporter F11_RS01615 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F11_RS01620 PF00361 Proton-conducting membrane transporter F11_RS01625 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F11_RS01625 PF00374 Nickel-dependent hydrogenase F11_RS01625 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F11_RS01630 PF00146 NADH dehydrogenase F11_RS01640 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F11_RS01645 PF00361 Proton-conducting membrane transporter F11_RS01645 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F11_RS01650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F11_RS01660 PF12800 4Fe-4S binding domain F11_RS01660 PF13247 4Fe-4S dicluster domain F11_RS01665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F11_RS01665 PF00384 Molybdopterin oxidoreductase F11_RS01665 PF01568 Molydopterin dinucleotide binding domain F11_RS01670 PF06463 Molybdenum Cofactor Synthesis C F11_RS01670 PF04055 Radical SAM superfamily F11_RS01675 PF01590 GAF domain F11_RS01675 PF00158 Sigma-54 interaction domain F11_RS01680 PF00512 His Kinase A (phospho-acceptor) domain F11_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS01690 PF03466 LysR substrate binding domain F11_RS01690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS01695 PF00892 EamA-like transporter family F11_RS01700 PF02798 Glutathione S-transferase, N-terminal domain F11_RS01700 PF00043 Glutathione S-transferase, C-terminal domain F11_RS01705 PF00210 Ferritin-like domain F11_RS01715 PF03466 LysR substrate binding domain F11_RS01715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS01720 PF03129 Anticodon binding domain F11_RS01720 PF04073 Aminoacyl-tRNA editing domain F11_RS01720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F11_RS01735 PF01638 HxlR-like helix-turn-helix F11_RS01750 PF00270 DEAD/DEAH box helicase F11_RS01750 PF18019 HD domain F11_RS01750 PF00271 Helicase conserved C-terminal domain F11_RS01790 PF01867 CRISPR associated protein Cas1 F11_RS01805 PF07929 Plasmid pRiA4b ORF-3-like protein F11_RS01810 PF10134 Replication initiator protein A F11_RS01825 PF13356 Arm DNA-binding domain F11_RS01825 PF00589 Phage integrase family F11_RS01830 PF00117 Glutamine amidotransferase class-I F11_RS01830 PF02540 NAD synthase F11_RS01830 PF00958 GMP synthase C terminal domain F11_RS01835 PF00180 Isocitrate/isopropylmalate dehydrogenase F11_RS01840 PF03641 Possible lysine decarboxylase F11_RS01850 PF00596 Class II Aldolase and Adducin N-terminal domain F11_RS01855 PF01008 Initiation factor 2 subunit family F11_RS01860 PF01048 Phosphorylase superfamily F11_RS01865 PF02167 Cytochrome C1 family F11_RS01870 PF00033 Cytochrome b/b6/petB F11_RS01870 PF00032 Cytochrome b(C-terminal)/b6/petD F11_RS01875 PF00355 Rieske [2Fe-2S] domain F11_RS01875 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal F11_RS01880 PF00588 SpoU rRNA Methylase family F11_RS01895 PF00293 NUDIX domain F11_RS01905 PF07726 ATPase family associated with various cellular activities (AAA) F11_RS01905 PF17863 AAA lid domain F11_RS01925 PF03358 NADPH-dependent FMN reductase F11_RS01930 PF13409 Glutathione S-transferase, N-terminal domain F11_RS01935 PF17954 Quercetinase C-terminal cupin domain F11_RS01935 PF02678 Pirin F11_RS01940 PF00072 Response regulator receiver domain F11_RS01940 PF04397 LytTr DNA-binding domain F11_RS01945 PF06580 Histidine kinase F11_RS01945 PF07694 5TMR of 5TMR-LYT F11_RS01965 PF00258 Flavodoxin F11_RS01975 PF07690 Major Facilitator Superfamily F11_RS02035 PF18146 Damage-inducible protein CinA KH domain F11_RS02035 PF00994 Probable molybdopterin binding domain F11_RS02035 PF02464 Competence-damaged protein F11_RS02040 PF00293 NUDIX domain F11_RS02045 PF01960 ArgJ family F11_RS02055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F11_RS02055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F11_RS02065 PF14698 Argininosuccinate lyase C-terminal F11_RS02065 PF00206 Lyase F11_RS02070 PF08534 Redoxin F11_RS02095 PF00106 short chain dehydrogenase F11_RS02100 PF13537 Glutamine amidotransferase domain F11_RS02100 PF00156 Phosphoribosyl transferase domain F11_RS02110 PF18073 Rubredoxin metal binding domain F11_RS02110 PF06745 KaiC F11_RS02115 PF00005 ABC transporter F11_RS02120 PF02405 Permease MlaE F11_RS02125 PF01168 Alanine racemase, N-terminal domain F11_RS02125 PF00842 Alanine racemase, C-terminal domain F11_RS02130 PF03796 DnaB-like helicase C terminal domain F11_RS02130 PF00772 DnaB-like helicase N terminal domain F11_RS02135 PF01281 Ribosomal protein L9, N-terminal domain F11_RS02135 PF03948 Ribosomal protein L9, C-terminal domain F11_RS02145 PF01084 Ribosomal protein S18 F11_RS02150 PF01250 Ribosomal protein S6 F11_RS02155 PF00698 Acyl transferase domain F11_RS02165 PF00550 Phosphopantetheine attachment site F11_RS02170 PF00109 Beta-ketoacyl synthase, N-terminal domain F11_RS02170 PF02801 Beta-ketoacyl synthase, C-terminal domain F11_RS02175 PF02618 YceG-like family F11_RS02210 PF00106 short chain dehydrogenase F11_RS02215 PF08340 Domain of unknown function (DUF1732) F11_RS02215 PF03755 YicC-like family, N-terminal region F11_RS02220 PF00625 Guanylate kinase F11_RS02230 PF00398 Ribosomal RNA adenine dimethylase F11_RS02235 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F11_RS02240 PF00639 PPIC-type PPIASE domain F11_RS02240 PF09312 SurA N-terminal domain F11_RS02245 PF04453 LPS transport system D F11_RS02250 PF12806 Acetyl-CoA dehydrogenase C-terminal like F11_RS02250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F11_RS02250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F11_RS02250 PF02770 Acyl-CoA dehydrogenase, middle domain F11_RS02260 PF00691 OmpA family F11_RS02265 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS02265 PF00512 His Kinase A (phospho-acceptor) domain F11_RS02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS02270 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS02280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS02280 PF08269 Cache domain F11_RS02285 PF02913 FAD linked oxidases, C-terminal domain F11_RS02285 PF01565 FAD binding domain F11_RS02295 PF01300 Telomere recombination F11_RS02295 PF03481 Putative GTP-binding controlling metal-binding F11_RS02300 PF00459 Inositol monophosphatase family F11_RS02315 PF01875 Memo-like protein F11_RS02330 PF01867 CRISPR associated protein Cas1 F11_RS02335 PF09827 CRISPR associated protein Cas2 F11_RS02340 PF13395 HNH endonuclease F11_RS02340 PF18541 RuvC endonuclease subdomain 3 F11_RS02345 PF00883 Cytosol aminopeptidase family, catalytic domain F11_RS02345 PF02789 Cytosol aminopeptidase family, N-terminal domain F11_RS02350 PF00293 NUDIX domain F11_RS02355 PF01381 Helix-turn-helix F11_RS02360 PF05973 Phage derived protein Gp49-like (DUF891) F11_RS02385 PF03466 LysR substrate binding domain F11_RS02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS02390 PF00171 Aldehyde dehydrogenase family F11_RS02395 PF14031 Putative serine dehydratase domain F11_RS02395 PF01168 Alanine racemase, N-terminal domain F11_RS02415 PF00205 Thiamine pyrophosphate enzyme, central domain F11_RS02415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F11_RS02415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F11_RS02420 PF10369 Small subunit of acetolactate synthase F11_RS02425 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F11_RS02425 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F11_RS02435 PF04085 rod shape-determining protein MreC F11_RS02445 PF03717 Penicillin-binding Protein dimerisation domain F11_RS02445 PF00905 Penicillin binding protein transpeptidase domain F11_RS02450 PF16884 N-terminal domain of oxidoreductase F11_RS02450 PF00107 Zinc-binding dehydrogenase F11_RS02455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F11_RS02460 PF02566 OsmC-like protein F11_RS02470 PF13186 Iron-sulfur cluster-binding domain F11_RS02470 PF04055 Radical SAM superfamily F11_RS02500 PF01078 Magnesium chelatase, subunit ChlI F11_RS02500 PF17863 AAA lid domain F11_RS02505 PF17863 AAA lid domain F11_RS02510 PF00561 alpha/beta hydrolase fold F11_RS02515 PF07715 TonB-dependent Receptor Plug Domain F11_RS02515 PF00593 TonB dependent receptor F11_RS02525 PF01032 FecCD transport family F11_RS02530 PF00005 ABC transporter F11_RS02540 PF01593 Flavin containing amine oxidoreductase F11_RS02555 PF00027 Cyclic nucleotide-binding domain F11_RS02555 PF07885 Ion channel F11_RS02560 PF08402 TOBE domain F11_RS02560 PF00005 ABC transporter F11_RS02565 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS02590 PF01921 tRNA synthetases class I (K) F11_RS02600 PF00128 Alpha amylase, catalytic domain F11_RS02600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F11_RS02605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F11_RS02605 PF00128 Alpha amylase, catalytic domain F11_RS02605 PF11941 Domain of unknown function (DUF3459) F11_RS02610 PF00128 Alpha amylase, catalytic domain F11_RS02615 PF01063 Amino-transferase class IV F11_RS02620 PF06114 IrrE N-terminal-like domain F11_RS02630 PF00271 Helicase conserved C-terminal domain F11_RS02645 PF01180 Dihydroorotate dehydrogenase F11_RS02655 PF00583 Acetyltransferase (GNAT) family F11_RS02660 PF01513 ATP-NAD kinase F11_RS02665 PF04055 Radical SAM superfamily F11_RS02665 PF06463 Molybdenum Cofactor Synthesis C F11_RS02680 PF01627 Hpt domain F11_RS02680 PF01584 CheW-like domain F11_RS02680 PF02895 Signal transducing histidine kinase, homodimeric domain F11_RS02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS02680 PF00072 Response regulator receiver domain F11_RS02685 PF00072 Response regulator receiver domain F11_RS02690 PF00072 Response regulator receiver domain F11_RS02690 PF01339 CheB methylesterase F11_RS02695 PF03705 CheR methyltransferase, all-alpha domain F11_RS02695 PF01739 CheR methyltransferase, SAM binding domain F11_RS02700 PF00072 Response regulator receiver domain F11_RS02700 PF00486 Transcriptional regulatory protein, C terminal F11_RS02705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F11_RS02705 PF02874 ATP synthase alpha/beta family, beta-barrel domain F11_RS02705 PF18269 T3SS EscN ATPase C-terminal domain F11_RS02715 PF00226 DnaJ domain F11_RS02715 PF01556 DnaJ C terminal domain F11_RS02715 PF00684 DnaJ central domain F11_RS02725 PF00970 Oxidoreductase FAD-binding domain F11_RS02725 PF00175 Oxidoreductase NAD-binding domain F11_RS02735 PF10609 NUBPL iron-transfer P-loop NTPase F11_RS02740 PF00448 SRP54-type protein, GTPase domain F11_RS02750 PF00892 EamA-like transporter family F11_RS02755 PF12833 Helix-turn-helix domain F11_RS02755 PF06719 AraC-type transcriptional regulator N-terminus F11_RS02770 PF00771 FHIPEP family F11_RS02775 PF00158 Sigma-54 interaction domain F11_RS02775 PF02954 Bacterial regulatory protein, Fis family F11_RS02780 PF01618 MotA/TolQ/ExbB proton channel family F11_RS02785 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F11_RS02795 PF14841 FliG middle domain F11_RS02795 PF01706 FliG C-terminal domain F11_RS02795 PF14842 FliG N-terminal domain F11_RS02800 PF01514 Secretory protein of YscJ/FliF family F11_RS02800 PF08345 Flagellar M-ring protein C-terminal F11_RS02805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F11_RS02805 PF07559 Flagellar basal body protein FlaE F11_RS02805 PF00460 Flagella basal body rod protein F11_RS02810 PF03963 Flagellar hook capping protein - N-terminal region F11_RS02810 PF13860 FlgD Ig-like domain F11_RS02810 PF13861 FlgD Tudor-like domain F11_RS02840 PF11849 Domain of unknown function (DUF3369) F11_RS02845 PF00909 Ammonium Transporter Family F11_RS02850 PF00543 Nitrogen regulatory protein P-II F11_RS02855 PF00551 Formyl transferase F11_RS02860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F11_RS02860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F11_RS02865 PF00563 EAL domain F11_RS02865 PF00990 Diguanylate cyclase, GGDEF domain F11_RS02865 PF03707 Bacterial signalling protein N terminal repeat F11_RS02875 PF01654 Cytochrome bd terminal oxidase subunit I F11_RS02880 PF02322 Cytochrome bd terminal oxidase subunit II F11_RS02905 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS02910 PF01523 Putative modulator of DNA gyrase F11_RS02915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS02915 PF08269 Cache domain F11_RS02930 PF04452 RNA methyltransferase F11_RS02935 PF01040 UbiA prenyltransferase family F11_RS02945 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F11_RS02950 PF01523 Putative modulator of DNA gyrase F11_RS02955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS02955 PF00672 HAMP domain F11_RS02960 PF00781 Diacylglycerol kinase catalytic domain F11_RS02970 PF13439 Glycosyltransferase Family 4 F11_RS02970 PF00534 Glycosyl transferases group 1 F11_RS02975 PF02566 OsmC-like protein F11_RS02980 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F11_RS02985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F11_RS02995 PF02653 Branched-chain amino acid transport system / permease component F11_RS03000 PF00005 ABC transporter F11_RS03000 PF12399 Branched-chain amino acid ATP-binding cassette transporter F11_RS03005 PF00166 Chaperonin 10 Kd subunit F11_RS03010 PF00118 TCP-1/cpn60 chaperonin family F11_RS03015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS03015 PF00005 ABC transporter F11_RS03020 PF00005 ABC transporter F11_RS03020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS03025 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS03025 PF12911 N-terminal TM domain of oligopeptide transport permease C F11_RS03030 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS03035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS03040 PF00174 Oxidoreductase molybdopterin binding domain F11_RS03045 PF01794 Ferric reductase like transmembrane component F11_RS03050 PF02780 Transketolase, C-terminal domain F11_RS03050 PF02779 Transketolase, pyrimidine binding domain F11_RS03050 PF00456 Transketolase, thiamine diphosphate binding domain F11_RS03055 PF01116 Fructose-bisphosphate aldolase class-II F11_RS03065 PF12849 PBP superfamily domain F11_RS03070 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS03075 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS03080 PF00005 ABC transporter F11_RS03085 PF01895 PhoU domain F11_RS03090 PF00486 Transcriptional regulatory protein, C terminal F11_RS03090 PF00072 Response regulator receiver domain F11_RS03100 PF03601 Conserved hypothetical protein 698 F11_RS03105 PF03466 LysR substrate binding domain F11_RS03105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS03110 PF00156 Phosphoribosyl transferase domain F11_RS03120 PF00582 Universal stress protein family F11_RS03135 PF00563 EAL domain F11_RS03135 PF03707 Bacterial signalling protein N terminal repeat F11_RS03135 PF00990 Diguanylate cyclase, GGDEF domain F11_RS03145 PF12291 Protein of unknown function (DUF3623) F11_RS03155 PF03703 Bacterial PH domain F11_RS03160 PF05239 PRC-barrel domain F11_RS03160 PF03967 Photosynthetic reaction centre, H-chain N-terminal region F11_RS03165 PF03209 PUCC protein F11_RS03170 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus F11_RS03170 PF05175 Methyltransferase small domain F11_RS03175 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family F11_RS03180 PF02514 CobN/Magnesium Chelatase F11_RS03180 PF11965 Domain of unknown function (DUF3479) F11_RS03185 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS03185 PF08369 Proto-chlorophyllide reductase 57 kD subunit F11_RS03190 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS03195 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) F11_RS03205 PF02954 Bacterial regulatory protein, Fis family F11_RS03205 PF13426 PAS domain F11_RS03205 PF13188 PAS domain F11_RS03210 PF01040 UbiA prenyltransferase family F11_RS03215 PF03209 PUCC protein F11_RS03230 PF00990 Diguanylate cyclase, GGDEF domain F11_RS03230 PF13426 PAS domain F11_RS03230 PF00563 EAL domain F11_RS03235 PF08269 Cache domain F11_RS03235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS03240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F11_RS03240 PF14579 Helix-hairpin-helix motif F11_RS03240 PF14480 DNA polymerase III polC-type N-terminus I F11_RS03240 PF07733 Bacterial DNA polymerase III alpha NTPase domain F11_RS03240 PF02811 PHP domain F11_RS03240 PF00929 Exonuclease F11_RS03240 PF11490 DNA polymerase III polC-type N-terminus II F11_RS03250 PF00474 Sodium:solute symporter family F11_RS03255 PF04341 Protein of unknown function, DUF485 F11_RS03270 PF02631 RecX family F11_RS03275 PF01061 ABC-2 type transporter F11_RS03280 PF01790 Prolipoprotein diacylglyceryl transferase F11_RS03290 PF02578 Multi-copper polyphenol oxidoreductase laccase F11_RS03300 PF14572 Phosphoribosyl synthetase-associated domain F11_RS03300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F11_RS03305 PF02843 Phosphoribosylglycinamide synthetase, C domain F11_RS03305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F11_RS03305 PF02844 Phosphoribosylglycinamide synthetase, N domain F11_RS03310 PF00291 Pyridoxal-phosphate dependent enzyme F11_RS03315 PF13649 Methyltransferase domain F11_RS03325 PF14437 MafB19-like deaminase F11_RS03330 PF07722 Peptidase C26 F11_RS03335 PF00849 RNA pseudouridylate synthase F11_RS03335 PF01479 S4 domain F11_RS03345 PF01914 MarC family integral membrane protein F11_RS03350 PF01037 Lrp/AsnC ligand binding domain F11_RS03355 PF14850 DNA-binding domain of Proline dehydrogenase F11_RS03355 PF00171 Aldehyde dehydrogenase family F11_RS03355 PF01619 Proline dehydrogenase F11_RS03355 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F11_RS03360 PF01810 LysE type translocator F11_RS03365 PF03466 LysR substrate binding domain F11_RS03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS03370 PF00563 EAL domain F11_RS03370 PF00990 Diguanylate cyclase, GGDEF domain F11_RS03370 PF03707 Bacterial signalling protein N terminal repeat F11_RS03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS03375 PF00512 His Kinase A (phospho-acceptor) domain F11_RS03380 PF03006 Haemolysin-III related F11_RS03385 PF01176 Translation initiation factor 1A / IF-1 F11_RS03390 PF00313 'Cold-shock' DNA-binding domain F11_RS03395 PF07568 Histidine kinase F11_RS03395 PF13426 PAS domain F11_RS03395 PF13581 Histidine kinase-like ATPase domain F11_RS03400 PF00072 Response regulator receiver domain F11_RS03405 PF00672 HAMP domain F11_RS03405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS03405 PF01627 Hpt domain F11_RS03405 PF00072 Response regulator receiver domain F11_RS03405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F11_RS03405 PF00512 His Kinase A (phospho-acceptor) domain F11_RS03410 PF02277 Phosphoribosyltransferase F11_RS03415 PF02654 Cobalamin-5-phosphate synthase F11_RS03425 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F11_RS03430 PF02492 CobW/HypB/UreG, nucleotide-binding domain F11_RS03430 PF07683 Cobalamin synthesis protein cobW C-terminal domain F11_RS03495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F11_RS03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS03500 PF01474 Class-II DAHP synthetase family F11_RS03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS03515 PF03466 LysR substrate binding domain F11_RS03520 PF00795 Carbon-nitrogen hydrolase F11_RS03520 PF02540 NAD synthase F11_RS03525 PF00749 tRNA synthetases class I (E and Q), catalytic domain F11_RS03530 PF01406 tRNA synthetases class I (C) catalytic domain F11_RS03530 PF09190 DALR domain F11_RS03535 PF00512 His Kinase A (phospho-acceptor) domain F11_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS03535 PF00989 PAS fold F11_RS03540 PF02954 Bacterial regulatory protein, Fis family F11_RS03540 PF00072 Response regulator receiver domain F11_RS03540 PF00158 Sigma-54 interaction domain F11_RS03545 PF00072 Response regulator receiver domain F11_RS03545 PF00158 Sigma-54 interaction domain F11_RS03545 PF02954 Bacterial regulatory protein, Fis family F11_RS03560 PF00682 HMGL-like F11_RS03560 PF08502 LeuA allosteric (dimerisation) domain F11_RS03565 PF00588 SpoU rRNA Methylase family F11_RS03570 PF01554 MatE F11_RS03575 PF07859 alpha/beta hydrolase fold F11_RS03595 PF00163 Ribosomal protein S4/S9 N-terminal domain F11_RS03595 PF01479 S4 domain F11_RS03600 PF00005 ABC transporter F11_RS03600 PF03459 TOBE domain F11_RS03605 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS03615 PF00462 Glutaredoxin F11_RS03620 PF00892 EamA-like transporter family F11_RS03625 PF01722 BolA-like protein F11_RS03630 PF00586 AIR synthase related protein, N-terminal domain F11_RS03630 PF02769 AIR synthase related protein, C-terminal domain F11_RS03630 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F11_RS03645 PF01259 SAICAR synthetase F11_RS03665 PF01544 CorA-like Mg2+ transporter protein F11_RS03670 PF10397 Adenylosuccinate lyase C-terminus F11_RS03670 PF00206 Lyase F11_RS03675 PF00717 Peptidase S24-like F11_RS03675 PF01381 Helix-turn-helix F11_RS03680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS03680 PF08269 Cache domain F11_RS03695 PF12973 ChrR Cupin-like domain F11_RS03700 PF04545 Sigma-70, region 4 F11_RS03700 PF04542 Sigma-70 region 2 F11_RS03750 PF04002 RadC-like JAB domain F11_RS03755 PF00557 Metallopeptidase family M24 F11_RS03765 PF03749 Sugar fermentation stimulation protein RE domain F11_RS03765 PF17746 SfsA N-terminal OB domain F11_RS03770 PF13847 Methyltransferase domain F11_RS03775 PF00156 Phosphoribosyl transferase domain F11_RS03780 PF00462 Glutaredoxin F11_RS03785 PF00795 Carbon-nitrogen hydrolase F11_RS03795 PF13426 PAS domain F11_RS03795 PF08447 PAS fold F11_RS03795 PF07536 HWE histidine kinase F11_RS03805 PF00696 Amino acid kinase family F11_RS03805 PF01842 ACT domain F11_RS03805 PF13840 ACT domain F11_RS03810 PF03060 Nitronate monooxygenase F11_RS03815 PF05524 PEP-utilising enzyme, N-terminal F11_RS03815 PF02896 PEP-utilising enzyme, TIM barrel domain F11_RS03815 PF00391 PEP-utilising enzyme, mobile domain F11_RS03825 PF04551 GcpE protein F11_RS03830 PF13393 Histidyl-tRNA synthetase F11_RS03830 PF03129 Anticodon binding domain F11_RS03835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F11_RS03835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F11_RS03835 PF01488 Shikimate / quinate 5-dehydrogenase F11_RS03840 PF00472 RF-1 domain F11_RS03840 PF03462 PCRF domain F11_RS03845 PF13847 Methyltransferase domain F11_RS03845 PF17827 PrmC N-terminal domain F11_RS03855 PF07724 AAA domain (Cdc48 subfamily) F11_RS03855 PF17871 AAA lid domain F11_RS03855 PF02861 Clp amino terminal domain, pathogenicity island component F11_RS03855 PF10431 C-terminal, D2-small domain, of ClpB protein F11_RS03855 PF00004 ATPase family associated with various cellular activities (AAA) F11_RS03865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS03865 PF08269 Cache domain F11_RS03870 PF01595 Cyclin M transmembrane N-terminal domain F11_RS03870 PF00571 CBS domain F11_RS03870 PF03471 Transporter associated domain F11_RS03880 PF12833 Helix-turn-helix domain F11_RS03880 PF01965 DJ-1/PfpI family F11_RS03885 PF00248 Aldo/keto reductase family F11_RS03900 PF04055 Radical SAM superfamily F11_RS03900 PF00919 Uncharacterized protein family UPF0004 F11_RS03900 PF01938 TRAM domain F11_RS03910 PF01521 Iron-sulphur cluster biosynthesis F11_RS03925 PF00962 Adenosine/AMP deaminase F11_RS03930 PF00005 ABC transporter F11_RS03930 PF17845 FbpC C-terminal regulatory nucleotide binding domain F11_RS03940 PF13416 Bacterial extracellular solute-binding protein F11_RS03945 PF01551 Peptidase family M23 F11_RS03945 PF01476 LysM domain F11_RS03945 PF08525 Opacity-associated protein A N-terminal motif F11_RS03985 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS03995 PF01053 Cys/Met metabolism PLP-dependent enzyme F11_RS04005 PF00155 Aminotransferase class I and II F11_RS04010 PF02913 FAD linked oxidases, C-terminal domain F11_RS04010 PF01565 FAD binding domain F11_RS04015 PF03180 NLPA lipoprotein F11_RS04020 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS04030 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS04045 PF01053 Cys/Met metabolism PLP-dependent enzyme F11_RS04050 PF03466 LysR substrate binding domain F11_RS04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS04055 PF01053 Cys/Met metabolism PLP-dependent enzyme F11_RS04060 PF00291 Pyridoxal-phosphate dependent enzyme F11_RS04065 PF00005 ABC transporter F11_RS04065 PF09383 NIL domain F11_RS04070 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS04075 PF00501 AMP-binding enzyme F11_RS04075 PF14535 AMP-binding enzyme C-terminal domain F11_RS04080 PF03180 NLPA lipoprotein F11_RS04090 PF06426 Serine acetyltransferase, N-terminal F11_RS04090 PF00132 Bacterial transferase hexapeptide (six repeats) F11_RS04095 PF08369 Proto-chlorophyllide reductase 57 kD subunit F11_RS04095 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS04100 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS04105 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family F11_RS04110 PF02579 Dinitrogenase iron-molybdenum cofactor F11_RS04110 PF04055 Radical SAM superfamily F11_RS04115 PF07690 Major Facilitator Superfamily F11_RS04120 PF00155 Aminotransferase class I and II F11_RS04130 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS04135 PF12911 N-terminal TM domain of oligopeptide transport permease C F11_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS04140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS04140 PF00005 ABC transporter F11_RS04145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS04145 PF00005 ABC transporter F11_RS04165 PF04956 TrbC/VIRB2 family F11_RS04170 PF00437 Type II/IV secretion system protein F11_RS04240 PF02603 HPr Serine kinase N terminus F11_RS04240 PF07475 HPr Serine kinase C-terminal domain F11_RS04260 PF00872 Transposase, Mutator family F11_RS04265 PF00872 Transposase, Mutator family F11_RS04270 PF00872 Transposase, Mutator family F11_RS04280 PF09704 CRISPR-associated protein (Cas_Cas5) F11_RS04300 PF01867 CRISPR associated protein Cas1 F11_RS04305 PF09827 CRISPR associated protein Cas2 F11_RS04320 PF00593 TonB dependent receptor F11_RS04320 PF07715 TonB-dependent Receptor Plug Domain F11_RS04330 PF07690 Major Facilitator Superfamily F11_RS04335 PF12833 Helix-turn-helix domain F11_RS04345 PF00005 ABC transporter F11_RS04345 PF00664 ABC transporter transmembrane region F11_RS04350 PF00005 ABC transporter F11_RS04355 PF00593 TonB dependent receptor F11_RS04355 PF07715 TonB-dependent Receptor Plug Domain F11_RS04365 PF03929 PepSY-associated TM region F11_RS04430 PF07690 Major Facilitator Superfamily F11_RS04435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F11_RS04435 PF00529 HlyD membrane-fusion protein of T1SS F11_RS04440 PF02321 Outer membrane efflux protein F11_RS04445 PF01047 MarR family F11_RS04455 PF00664 ABC transporter transmembrane region F11_RS04455 PF00005 ABC transporter F11_RS04455 PF08021 Siderophore-interacting FAD-binding domain F11_RS04455 PF04954 Siderophore-interacting protein F11_RS04460 PF00005 ABC transporter F11_RS04460 PF04954 Siderophore-interacting protein F11_RS04460 PF08021 Siderophore-interacting FAD-binding domain F11_RS04460 PF00664 ABC transporter transmembrane region F11_RS04465 PF00593 TonB dependent receptor F11_RS04465 PF07715 TonB-dependent Receptor Plug Domain F11_RS04530 PF12848 ABC transporter F11_RS04530 PF00005 ABC transporter F11_RS04535 PF02311 AraC-like ligand binding domain F11_RS04535 PF12833 Helix-turn-helix domain F11_RS04540 PF07715 TonB-dependent Receptor Plug Domain F11_RS04540 PF00593 TonB dependent receptor F11_RS04545 PF08021 Siderophore-interacting FAD-binding domain F11_RS04545 PF00005 ABC transporter F11_RS04545 PF00664 ABC transporter transmembrane region F11_RS04545 PF04954 Siderophore-interacting protein F11_RS04550 PF00005 ABC transporter F11_RS04550 PF00664 ABC transporter transmembrane region F11_RS04555 PF12680 SnoaL-like domain F11_RS04555 PF04542 Sigma-70 region 2 F11_RS04555 PF08281 Sigma-70, region 4 F11_RS04565 PF00593 TonB dependent receptor F11_RS04565 PF07715 TonB-dependent Receptor Plug Domain F11_RS04570 PF00873 AcrB/AcrD/AcrF family F11_RS04575 PF13533 Biotin-lipoyl like F11_RS04580 PF00440 Bacterial regulatory proteins, tetR family F11_RS04590 PF03741 Integral membrane protein TerC family F11_RS04595 PF05099 Tellurite resistance protein TerB F11_RS04600 PF02342 TerD domain F11_RS04605 PF02342 TerD domain F11_RS04610 PF02342 TerD domain F11_RS04615 PF13744 Helix-turn-helix domain F11_RS04635 PF15608 PELOTA RNA binding domain F11_RS04635 PF11202 Phosphoribosyl transferase (PRTase) F11_RS04655 PF01228 Glycine radical F11_RS04655 PF02901 Pyruvate formate lyase-like F11_RS04660 PF00465 Iron-containing alcohol dehydrogenase F11_RS04665 PF00936 BMC domain F11_RS04670 PF00936 BMC domain F11_RS04675 PF00936 BMC domain F11_RS04680 PF00936 BMC domain F11_RS04685 PF06130 Phosphate propanoyltransferase F11_RS04700 PF03319 Ethanolamine utilisation protein EutN/carboxysome F11_RS04705 PF03928 Haem-degrading F11_RS04710 PF00171 Aldehyde dehydrogenase family F11_RS04720 PF04055 Radical SAM superfamily F11_RS04725 PF02772 S-adenosylmethionine synthetase, central domain F11_RS04725 PF00438 S-adenosylmethionine synthetase, N-terminal domain F11_RS04725 PF02773 S-adenosylmethionine synthetase, C-terminal domain F11_RS04730 PF02743 Cache domain F11_RS04730 PF00672 HAMP domain F11_RS04730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS04730 PF06580 Histidine kinase F11_RS04735 PF00072 Response regulator receiver domain F11_RS04735 PF00196 Bacterial regulatory proteins, luxR family F11_RS04740 PF00871 Acetokinase family F11_RS04745 PF00145 C-5 cytosine-specific DNA methylase F11_RS04745 PF01381 Helix-turn-helix F11_RS04770 PF00534 Glycosyl transferases group 1 F11_RS04780 PF00296 Luciferase-like monooxygenase F11_RS04785 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA F11_RS04795 PF00465 Iron-containing alcohol dehydrogenase F11_RS04800 PF00171 Aldehyde dehydrogenase family F11_RS04805 PF00158 Sigma-54 interaction domain F11_RS04805 PF01590 GAF domain F11_RS04805 PF02954 Bacterial regulatory protein, Fis family F11_RS04810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F11_RS04815 PF03407 Nucleotide-diphospho-sugar transferase F11_RS04820 PF01370 NAD dependent epimerase/dehydratase family F11_RS04830 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus F11_RS04830 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term F11_RS04835 PF00535 Glycosyl transferase family 2 F11_RS04840 PF01653 NAD-dependent DNA ligase adenylation domain F11_RS04840 PF12826 Helix-hairpin-helix motif F11_RS04840 PF00533 BRCA1 C Terminus (BRCT) domain F11_RS04840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F11_RS04840 PF03120 NAD-dependent DNA ligase OB-fold domain F11_RS04845 PF02463 RecF/RecN/SMC N terminal domain F11_RS04850 PF13525 Outer membrane lipoprotein F11_RS04855 PF01272 Transcription elongation factor, GreA/GreB, C-term F11_RS04855 PF14760 Rnk N-terminus F11_RS04860 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F11_RS04865 PF00091 Tubulin/FtsZ family, GTPase domain F11_RS04865 PF12327 FtsZ family, C-terminal domain F11_RS04870 PF02491 SHS2 domain inserted in FTSA F11_RS04875 PF08478 POTRA domain, FtsQ-type F11_RS04875 PF03799 Cell division protein FtsQ F11_RS04880 PF01820 D-ala D-ala ligase N-terminus F11_RS04880 PF07478 D-ala D-ala ligase C-terminus F11_RS04885 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F11_RS04885 PF01565 FAD binding domain F11_RS04890 PF02875 Mur ligase family, glutamate ligase domain F11_RS04890 PF08245 Mur ligase middle domain F11_RS04890 PF01225 Mur ligase family, catalytic domain F11_RS04895 PF03033 Glycosyltransferase family 28 N-terminal domain F11_RS04895 PF04101 Glycosyltransferase family 28 C-terminal domain F11_RS04900 PF01098 Cell cycle protein F11_RS04905 PF08245 Mur ligase middle domain F11_RS04910 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F11_RS04910 PF00953 Glycosyl transferase family 4 F11_RS04915 PF01225 Mur ligase family, catalytic domain F11_RS04915 PF08245 Mur ligase middle domain F11_RS04915 PF02875 Mur ligase family, glutamate ligase domain F11_RS04920 PF08245 Mur ligase middle domain F11_RS04920 PF02875 Mur ligase family, glutamate ligase domain F11_RS04920 PF01225 Mur ligase family, catalytic domain F11_RS04925 PF03717 Penicillin-binding Protein dimerisation domain F11_RS04925 PF00905 Penicillin binding protein transpeptidase domain F11_RS04935 PF01795 MraW methylase family F11_RS04940 PF02381 MraZ protein, putative antitoxin-like F11_RS04945 PF01510 N-acetylmuramoyl-L-alanine amidase F11_RS04950 PF05099 Tellurite resistance protein TerB F11_RS04950 PF00226 DnaJ domain F11_RS04970 PF01799 [2Fe-2S] binding domain F11_RS04970 PF00111 2Fe-2S iron-sulfur cluster binding domain F11_RS04975 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase F11_RS04975 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain F11_RS04980 PF00941 FAD binding domain in molybdopterin dehydrogenase F11_RS04980 PF03450 CO dehydrogenase flavoprotein C-terminal domain F11_RS04985 PF00004 ATPase family associated with various cellular activities (AAA) F11_RS04985 PF02861 Clp amino terminal domain, pathogenicity island component F11_RS04985 PF10431 C-terminal, D2-small domain, of ClpB protein F11_RS04985 PF17871 AAA lid domain F11_RS04985 PF07724 AAA domain (Cdc48 subfamily) F11_RS04995 PF02625 XdhC and CoxI family F11_RS04995 PF13478 XdhC Rossmann domain F11_RS05000 PF12804 MobA-like NTP transferase domain F11_RS05000 PF00132 Bacterial transferase hexapeptide (six repeats) F11_RS05000 PF14602 Hexapeptide repeat of succinyl-transferase F11_RS05005 PF02153 Prephenate dehydrogenase F11_RS05005 PF01817 Chorismate mutase type II F11_RS05015 PF04454 Encapsulating protein for peroxidase F11_RS05025 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system F11_RS05055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS05060 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS05065 PF12911 N-terminal TM domain of oligopeptide transport permease C F11_RS05070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS05070 PF00005 ABC transporter F11_RS05075 PF01425 Amidase F11_RS05080 PF07687 Peptidase dimerisation domain F11_RS05080 PF01546 Peptidase family M20/M25/M40 F11_RS05085 PF01590 GAF domain F11_RS05085 PF00360 Phytochrome region F11_RS05085 PF00990 Diguanylate cyclase, GGDEF domain F11_RS05085 PF00563 EAL domain F11_RS05105 PF02608 ABC transporter substrate-binding protein PnrA-like F11_RS05110 PF03707 Bacterial signalling protein N terminal repeat F11_RS05110 PF00563 EAL domain F11_RS05110 PF00990 Diguanylate cyclase, GGDEF domain F11_RS05115 PF03458 UPF0126 domain F11_RS05125 PF13185 GAF domain F11_RS05125 PF02954 Bacterial regulatory protein, Fis family F11_RS05125 PF00158 Sigma-54 interaction domain F11_RS05130 PF04055 Radical SAM superfamily F11_RS05130 PF02579 Dinitrogenase iron-molybdenum cofactor F11_RS05135 PF12838 4Fe-4S dicluster domain F11_RS05145 PF04319 NifZ domain F11_RS05150 PF06988 NifT/FixU protein F11_RS05165 PF00005 ABC transporter F11_RS05170 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS05180 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS05185 PF00535 Glycosyl transferase family 2 F11_RS05190 PF01757 Acyltransferase family F11_RS05195 PF03960 ArsC family F11_RS05200 PF03747 ADP-ribosylglycohydrolase F11_RS05205 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) F11_RS05210 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family F11_RS05215 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS05220 PF11844 Domain of unknown function (DUF3364) F11_RS05220 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS05225 PF16326 ABC transporter C-terminal domain F11_RS05225 PF00005 ABC transporter F11_RS05235 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS05245 PF08402 TOBE domain F11_RS05245 PF00005 ABC transporter F11_RS05250 PF13416 Bacterial extracellular solute-binding protein F11_RS05255 PF01266 FAD dependent oxidoreductase F11_RS05260 PF00034 Cytochrome c F11_RS05265 PF04545 Sigma-70, region 4 F11_RS05265 PF00140 Sigma-70 factor, region 1.2 F11_RS05265 PF04542 Sigma-70 region 2 F11_RS05290 PF13411 MerR HTH family regulatory protein F11_RS05295 PF00403 Heavy-metal-associated domain F11_RS05305 PF12833 Helix-turn-helix domain F11_RS05310 PF13520 Amino acid permease F11_RS05315 PF05985 Ethanolamine ammonia-lyase light chain (EutC) F11_RS05320 PF06751 Ethanolamine ammonia lyase large subunit (EutB) F11_RS05325 PF05974 Domain of unknown function (DUF892) F11_RS05330 PF00563 EAL domain F11_RS05330 PF01590 GAF domain F11_RS05330 PF00989 PAS fold F11_RS05330 PF00990 Diguanylate cyclase, GGDEF domain F11_RS05335 PF03707 Bacterial signalling protein N terminal repeat F11_RS05335 PF00990 Diguanylate cyclase, GGDEF domain F11_RS05335 PF00563 EAL domain F11_RS05340 PF06299 Protein of unknown function (DUF1045) F11_RS05345 PF07969 Amidohydrolase family F11_RS05360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F11_RS05360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F11_RS05365 PF03466 LysR substrate binding domain F11_RS05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS05370 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) F11_RS05375 PF01165 Ribosomal protein S21 F11_RS05380 PF01327 Polypeptide deformylase F11_RS05390 PF13193 AMP-binding enzyme C-terminal domain F11_RS05390 PF00501 AMP-binding enzyme F11_RS05390 PF16177 Acetyl-coenzyme A synthetase N-terminus F11_RS05400 PF00365 Phosphofructokinase F11_RS05415 PF00731 AIR carboxylase F11_RS05420 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F11_RS05420 PF02222 ATP-grasp domain F11_RS05430 PF00672 HAMP domain F11_RS05430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS05430 PF02203 Tar ligand binding domain homologue F11_RS05445 PF00550 Phosphopantetheine attachment site F11_RS05445 PF08659 KR domain F11_RS05445 PF02801 Beta-ketoacyl synthase, C-terminal domain F11_RS05445 PF00109 Beta-ketoacyl synthase, N-terminal domain F11_RS05445 PF16197 Ketoacyl-synthetase C-terminal extension F11_RS05445 PF14765 Polyketide synthase dehydratase F11_RS05445 PF00698 Acyl transferase domain F11_RS05445 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS05465 PF00248 Aldo/keto reductase family F11_RS05470 PF03466 LysR substrate binding domain F11_RS05470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS05490 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB F11_RS05495 PF01381 Helix-turn-helix F11_RS05500 PF00005 ABC transporter F11_RS05500 PF08402 TOBE domain F11_RS05510 PF00266 Aminotransferase class-V F11_RS05520 PF00011 Hsp20/alpha crystallin family F11_RS05530 PF01197 Ribosomal protein L31 F11_RS05535 PF00691 OmpA family F11_RS05535 PF13677 Membrane MotB of proton-channel complex MotA/MotB F11_RS05550 PF00459 Inositol monophosphatase family F11_RS05555 PF09285 Elongation factor P, C-terminal F11_RS05555 PF01132 Elongation factor P (EF-P) OB domain F11_RS05555 PF08207 Elongation factor P (EF-P) KOW-like domain F11_RS05560 PF00152 tRNA synthetases class II (D, K and N) F11_RS05565 PF00999 Sodium/hydrogen exchanger family F11_RS05565 PF03471 Transporter associated domain F11_RS05565 PF02080 TrkA-C domain F11_RS05570 PF02581 Thiamine monophosphate synthase F11_RS05590 PF01812 5-formyltetrahydrofolate cyclo-ligase family F11_RS05595 PF13277 YmdB-like protein F11_RS05600 PF01709 Transcriptional regulator F11_RS05605 PF02075 Crossover junction endodeoxyribonuclease RuvC F11_RS05610 PF07499 RuvA, C-terminal domain F11_RS05610 PF01330 RuvA N terminal domain F11_RS05615 PF05496 Holliday junction DNA helicase RuvB P-loop domain F11_RS05615 PF05491 RuvB C-terminal winged helix domain F11_RS05615 PF17864 RuvB AAA lid domain F11_RS05620 PF03061 Thioesterase superfamily F11_RS05625 PF01618 MotA/TolQ/ExbB proton channel family F11_RS05630 PF02472 Biopolymer transport protein ExbD/TolR F11_RS05640 PF04052 TolB amino-terminal domain F11_RS05640 PF07676 WD40-like Beta Propeller Repeat F11_RS05645 PF00691 OmpA family F11_RS05655 PF01171 PP-loop family F11_RS05660 PF17862 AAA+ lid domain F11_RS05660 PF00004 ATPase family associated with various cellular activities (AAA) F11_RS05660 PF01434 Peptidase family M41 F11_RS05665 PF00809 Pterin binding enzyme F11_RS05670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F11_RS05670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F11_RS05670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F11_RS05670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F11_RS05680 PF08543 Phosphomethylpyrimidine kinase F11_RS05680 PF02581 Thiamine monophosphate synthase F11_RS05685 PF02567 Phenazine biosynthesis-like protein F11_RS05695 PF13393 Histidyl-tRNA synthetase F11_RS05700 PF00709 Adenylosuccinate synthetase F11_RS05715 PF00672 HAMP domain F11_RS05715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS05715 PF17200 Single Cache domain 2 F11_RS05720 PF04545 Sigma-70, region 4 F11_RS05720 PF04542 Sigma-70 region 2 F11_RS05720 PF00140 Sigma-70 factor, region 1.2 F11_RS05725 PF00849 RNA pseudouridylate synthase F11_RS05740 PF07690 Major Facilitator Superfamily F11_RS05755 PF00529 HlyD membrane-fusion protein of T1SS F11_RS05755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F11_RS05760 PF00873 AcrB/AcrD/AcrF family F11_RS05770 PF00005 ABC transporter F11_RS05770 PF00664 ABC transporter transmembrane region F11_RS05775 PF02785 Biotin carboxylase C-terminal domain F11_RS05775 PF00289 Biotin carboxylase, N-terminal domain F11_RS05775 PF02436 Conserved carboxylase domain F11_RS05775 PF00682 HMGL-like F11_RS05775 PF00364 Biotin-requiring enzyme F11_RS05775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F11_RS05780 PF12706 Beta-lactamase superfamily domain F11_RS05790 PF01565 FAD binding domain F11_RS05790 PF02913 FAD linked oxidases, C-terminal domain F11_RS05795 PF01381 Helix-turn-helix F11_RS05820 PF00909 Ammonium Transporter Family F11_RS05825 PF00543 Nitrogen regulatory protein P-II F11_RS05830 PF01063 Amino-transferase class IV F11_RS05835 PF04715 Anthranilate synthase component I, N terminal region F11_RS05835 PF00425 chorismate binding enzyme F11_RS05840 PF12344 Ultra-violet resistance protein B F11_RS05840 PF04851 Type III restriction enzyme, res subunit F11_RS05840 PF02151 UvrB/uvrC motif F11_RS05840 PF17757 UvrB interaction domain F11_RS05840 PF00271 Helicase conserved C-terminal domain F11_RS05850 PF02386 Cation transport protein F11_RS05855 PF00155 Aminotransferase class I and II F11_RS05865 PF01032 FecCD transport family F11_RS05870 PF00005 ABC transporter F11_RS05875 PF00127 Copper binding proteins, plastocyanin/azurin family F11_RS05880 PF14492 Elongation Factor G, domain II F11_RS05880 PF03764 Elongation factor G, domain IV F11_RS05880 PF00679 Elongation factor G C-terminus F11_RS05880 PF00009 Elongation factor Tu GTP binding domain F11_RS05885 PF01168 Alanine racemase, N-terminal domain F11_RS05890 PF00464 Serine hydroxymethyltransferase F11_RS05895 PF00392 Bacterial regulatory proteins, gntR family F11_RS05895 PF00155 Aminotransferase class I and II F11_RS05900 PF03594 Benzoate membrane transport protein F11_RS05905 PF08543 Phosphomethylpyrimidine kinase F11_RS05910 PF00155 Aminotransferase class I and II F11_RS05915 PF00202 Aminotransferase class-III F11_RS05945 PF09827 CRISPR associated protein Cas2 F11_RS05950 PF01867 CRISPR associated protein Cas1 F11_RS05975 PF03814 Potassium-transporting ATPase A subunit F11_RS05985 PF02669 K+-transporting ATPase, c chain F11_RS05990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS05990 PF13493 Domain of unknown function (DUF4118) F11_RS05990 PF02702 Osmosensitive K+ channel His kinase sensor domain F11_RS05990 PF00512 His Kinase A (phospho-acceptor) domain F11_RS05990 PF13492 GAF domain F11_RS05995 PF00486 Transcriptional regulatory protein, C terminal F11_RS05995 PF00072 Response regulator receiver domain F11_RS06000 PF17200 Single Cache domain 2 F11_RS06000 PF00672 HAMP domain F11_RS06000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS06005 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal F11_RS06005 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F11_RS06010 PF00374 Nickel-dependent hydrogenase F11_RS06015 PF01292 Prokaryotic cytochrome b561 F11_RS06020 PF01750 Hydrogenase maturation protease F11_RS06025 PF01455 HupF/HypC family F11_RS06030 PF04809 HupH hydrogenase expression protein, C-terminal conserved region F11_RS06040 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA F11_RS06045 PF02492 CobW/HypB/UreG, nucleotide-binding domain F11_RS06050 PF00072 Response regulator receiver domain F11_RS06050 PF00158 Sigma-54 interaction domain F11_RS06050 PF02954 Bacterial regulatory protein, Fis family F11_RS06060 PF02082 Transcriptional regulator F11_RS06065 PF01037 Lrp/AsnC ligand binding domain F11_RS06075 PF01042 Endoribonuclease L-PSP F11_RS06080 PF05532 CsbD-like F11_RS06085 PF00850 Histone deacetylase domain F11_RS06090 PF00672 HAMP domain F11_RS06090 PF16591 Helical bimodular sensor domain F11_RS06090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS06095 PF03129 Anticodon binding domain F11_RS06095 PF02824 TGS domain F11_RS06095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F11_RS06095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F11_RS06100 PF08220 DeoR-like helix-turn-helix domain F11_RS06100 PF00455 DeoR C terminal sensor domain F11_RS06105 PF07690 Major Facilitator Superfamily F11_RS06110 PF00448 SRP54-type protein, GTPase domain F11_RS06110 PF02881 SRP54-type protein, helical bundle domain F11_RS06115 PF04055 Radical SAM superfamily F11_RS06115 PF00919 Uncharacterized protein family UPF0004 F11_RS06120 PF01678 Diaminopimelate epimerase F11_RS06125 PF02881 SRP54-type protein, helical bundle domain F11_RS06125 PF00448 SRP54-type protein, GTPase domain F11_RS06125 PF02978 Signal peptide binding domain F11_RS06130 PF00886 Ribosomal protein S16 F11_RS06135 PF01782 RimM N-terminal domain F11_RS06135 PF05239 PRC-barrel domain F11_RS06140 PF01746 tRNA (Guanine-1)-methyltransferase F11_RS06145 PF01245 Ribosomal protein L19 F11_RS06150 PF00330 Aconitase family (aconitate hydratase) F11_RS06155 PF00694 Aconitase C-terminal domain F11_RS06160 PF00180 Isocitrate/isopropylmalate dehydrogenase F11_RS06165 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal F11_RS06165 PF00355 Rieske [2Fe-2S] domain F11_RS06175 PF02001 Protein of unknown function DUF134 F11_RS06185 PF01118 Semialdehyde dehydrogenase, NAD binding domain F11_RS06185 PF02774 Semialdehyde dehydrogenase, dimerisation domain F11_RS06190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS06200 PF08543 Phosphomethylpyrimidine kinase F11_RS06205 PF03328 HpcH/HpaI aldolase/citrate lyase family F11_RS06210 PF01575 MaoC like domain F11_RS06215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F11_RS06225 PF02910 Fumarate reductase flavoprotein C-term F11_RS06225 PF00890 FAD binding domain F11_RS06230 PF13237 4Fe-4S dicluster domain F11_RS06230 PF13085 2Fe-2S iron-sulfur cluster binding domain F11_RS06245 PF03969 AFG1-like ATPase F11_RS06255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F11_RS06255 PF00056 lactate/malate dehydrogenase, NAD binding domain F11_RS06260 PF08442 ATP-grasp domain F11_RS06260 PF00549 CoA-ligase F11_RS06265 PF02629 CoA binding domain F11_RS06265 PF00549 CoA-ligase F11_RS06270 PF00676 Dehydrogenase E1 component F11_RS06270 PF16078 2-oxoglutarate dehydrogenase N-terminus F11_RS06270 PF16870 2-oxoglutarate dehydrogenase C-terminal F11_RS06270 PF02779 Transketolase, pyrimidine binding domain F11_RS06275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F11_RS06275 PF02817 e3 binding domain F11_RS06275 PF00364 Biotin-requiring enzyme F11_RS06280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F11_RS06280 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS06290 PF06667 Phage shock protein B F11_RS06295 PF04012 PspA/IM30 family F11_RS06300 PF00158 Sigma-54 interaction domain F11_RS06300 PF02954 Bacterial regulatory protein, Fis family F11_RS06305 PF02899 Phage integrase, N-terminal SAM-like domain F11_RS06305 PF00589 Phage integrase family F11_RS06315 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F11_RS06315 PF17764 3′ DNA-binding domain (3′BD) F11_RS06315 PF18074 Primosomal protein N C-terminal domain F11_RS06315 PF00270 DEAD/DEAH box helicase F11_RS06320 PF00213 ATP synthase delta (OSCP) subunit F11_RS06325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F11_RS06325 PF02874 ATP synthase alpha/beta family, beta-barrel domain F11_RS06325 PF00306 ATP synthase alpha/beta chain, C terminal domain F11_RS06330 PF00231 ATP synthase F11_RS06335 PF02874 ATP synthase alpha/beta family, beta-barrel domain F11_RS06335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F11_RS06340 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F11_RS06355 PF00293 NUDIX domain F11_RS06365 PF13180 PDZ domain F11_RS06365 PF03572 Peptidase family S41 F11_RS06370 PF01551 Peptidase family M23 F11_RS06375 PF01676 Metalloenzyme superfamily F11_RS06375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F11_RS06380 PF02590 Predicted SPOUT methyltransferase F11_RS06390 PF01467 Cytidylyltransferase-like F11_RS06395 PF00171 Aldehyde dehydrogenase family F11_RS06400 PF00696 Amino acid kinase family F11_RS06400 PF01472 PUA domain F11_RS06405 PF01926 50S ribosome-binding GTPase F11_RS06405 PF01018 GTP1/OBG F11_RS06410 PF01016 Ribosomal L27 protein F11_RS06415 PF00829 Ribosomal prokaryotic L21 protein F11_RS06470 PF00120 Glutamine synthetase, catalytic domain F11_RS06475 PF00120 Glutamine synthetase, catalytic domain F11_RS06480 PF00202 Aminotransferase class-III F11_RS06510 PF17912 MalK OB fold domain F11_RS06510 PF00005 ABC transporter F11_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS06525 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS06535 PF08220 DeoR-like helix-turn-helix domain F11_RS06535 PF00455 DeoR C terminal sensor domain F11_RS06540 PF03437 BtpA family F11_RS06545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F11_RS06545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F11_RS06550 PF13419 Haloacid dehalogenase-like hydrolase F11_RS06570 PF13426 PAS domain F11_RS06570 PF08448 PAS fold F11_RS06570 PF08447 PAS fold F11_RS06570 PF05231 MASE1 F11_RS06570 PF00990 Diguanylate cyclase, GGDEF domain F11_RS06570 PF00563 EAL domain F11_RS06575 PF08386 TAP-like protein F11_RS06575 PF00561 alpha/beta hydrolase fold F11_RS06580 PF04055 Radical SAM superfamily F11_RS06595 PF00512 His Kinase A (phospho-acceptor) domain F11_RS06595 PF00672 HAMP domain F11_RS06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS06595 PF00072 Response regulator receiver domain F11_RS06595 PF01627 Hpt domain F11_RS06595 PF17149 Periplasmic sensor domain found in signal transduction proteins F11_RS06615 PF02603 HPr Serine kinase N terminus F11_RS06615 PF07475 HPr Serine kinase C-terminal domain F11_RS06625 PF00072 Response regulator receiver domain F11_RS06625 PF00486 Transcriptional regulatory protein, C terminal F11_RS06630 PF03264 NapC/NirT cytochrome c family, N-terminal region F11_RS06640 PF12894 Anaphase-promoting complex subunit 4 WD40 domain F11_RS06640 PF00400 WD domain, G-beta repeat F11_RS06650 PF00384 Molybdopterin oxidoreductase F11_RS06650 PF18364 Molybdopterin oxidoreductase N-terminal domain F11_RS06650 PF01568 Molydopterin dinucleotide binding domain F11_RS06655 PF06463 Molybdenum Cofactor Synthesis C F11_RS06655 PF04055 Radical SAM superfamily F11_RS06660 PF00245 Alkaline phosphatase F11_RS06670 PF00005 ABC transporter F11_RS06680 PF00672 HAMP domain F11_RS06680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS06680 PF12729 Four helix bundle sensory module for signal transduction F11_RS06685 PF00392 Bacterial regulatory proteins, gntR family F11_RS06685 PF07702 UTRA domain F11_RS06690 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS06695 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS06700 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS06705 PF00005 ABC transporter F11_RS06710 PF01565 FAD binding domain F11_RS06710 PF02913 FAD linked oxidases, C-terminal domain F11_RS06720 PF00221 Aromatic amino acid lyase F11_RS06730 PF01979 Amidohydrolase family F11_RS06735 PF17392 Urocanase C-terminal domain F11_RS06735 PF01175 Urocanase Rossmann-like domain F11_RS06735 PF17391 Urocanase N-terminal domain F11_RS06745 PF00106 short chain dehydrogenase F11_RS06755 PF12806 Acetyl-CoA dehydrogenase C-terminal like F11_RS06755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F11_RS06755 PF02770 Acyl-CoA dehydrogenase, middle domain F11_RS06755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F11_RS06760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F11_RS06760 PF00378 Enoyl-CoA hydratase/isomerase F11_RS06760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F11_RS06765 PF00108 Thiolase, N-terminal domain F11_RS06765 PF02803 Thiolase, C-terminal domain F11_RS06770 PF13411 MerR HTH family regulatory protein F11_RS06775 PF13193 AMP-binding enzyme C-terminal domain F11_RS06775 PF00501 AMP-binding enzyme F11_RS06780 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F11_RS06795 PF00501 AMP-binding enzyme F11_RS06795 PF13193 AMP-binding enzyme C-terminal domain F11_RS06810 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F11_RS06815 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F11_RS06820 PF03099 Biotin/lipoate A/B protein ligase family F11_RS06820 PF02237 Biotin protein ligase C terminal domain F11_RS06820 PF08279 HTH domain F11_RS06825 PF16957 Malonate decarboxylase, alpha subunit, transporter F11_RS06830 PF06857 Malonate decarboxylase delta subunit (MdcD) F11_RS06835 PF01039 Carboxyl transferase domain F11_RS06850 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG F11_RS06855 PF00364 Biotin-requiring enzyme F11_RS06870 PF00005 ABC transporter F11_RS06875 PF02361 Cobalt transport protein F11_RS06880 PF02632 BioY family F11_RS06885 PF02502 Ribose/Galactose Isomerase F11_RS06890 PF02653 Branched-chain amino acid transport system / permease component F11_RS06895 PF13407 Periplasmic binding protein domain F11_RS06900 PF00005 ABC transporter F11_RS06905 PF02653 Branched-chain amino acid transport system / permease component F11_RS06915 PF02733 Dak1 domain F11_RS06920 PF02734 DAK2 domain F11_RS06935 PF01791 DeoC/LacD family aldolase F11_RS06940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F11_RS06940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F11_RS06945 PF07729 FCD domain F11_RS06945 PF00392 Bacterial regulatory proteins, gntR family F11_RS06950 PF01925 Sulfite exporter TauE/SafE F11_RS06985 PF05974 Domain of unknown function (DUF892) F11_RS06990 PF18011 C-terminal domain found in long catalases F11_RS06990 PF00199 Catalase F11_RS06990 PF06628 Catalase-related immune-responsive F11_RS06995 PF00923 Transaldolase/Fructose-6-phosphate aldolase F11_RS07000 PF00121 Triosephosphate isomerase F11_RS07005 PF02502 Ribose/Galactose Isomerase F11_RS07010 PF02734 DAK2 domain F11_RS07015 PF02733 Dak1 domain F11_RS07025 PF02653 Branched-chain amino acid transport system / permease component F11_RS07030 PF00005 ABC transporter F11_RS07040 PF04198 Putative sugar-binding domain F11_RS07045 PF01380 SIS domain F11_RS07100 PF07085 DRTGG domain F11_RS07100 PF01515 Phosphate acetyl/butaryl transferase F11_RS07105 PF00871 Acetokinase family F11_RS07110 PF02803 Thiolase, C-terminal domain F11_RS07110 PF00108 Thiolase, N-terminal domain F11_RS07115 PF02667 Short chain fatty acid transporter F11_RS07120 PF01144 Coenzyme A transferase F11_RS07125 PF01144 Coenzyme A transferase F11_RS07130 PF00989 PAS fold F11_RS07130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS07130 PF00512 His Kinase A (phospho-acceptor) domain F11_RS07135 PF00158 Sigma-54 interaction domain F11_RS07135 PF00072 Response regulator receiver domain F11_RS07135 PF02954 Bacterial regulatory protein, Fis family F11_RS07140 PF12343 Cold shock protein DEAD box A F11_RS07140 PF00270 DEAD/DEAH box helicase F11_RS07140 PF00271 Helicase conserved C-terminal domain F11_RS07140 PF03880 DbpA RNA binding domain F11_RS07150 PF01590 GAF domain F11_RS07150 PF00158 Sigma-54 interaction domain F11_RS07150 PF02954 Bacterial regulatory protein, Fis family F11_RS07155 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) F11_RS07165 PF09582 Iron only nitrogenase protein AnfO (AnfO_nitrog) F11_RS07170 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS07175 PF03139 Vanadium/alternative nitrogenase delta subunit F11_RS07180 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS07185 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family F11_RS07200 PF00072 Response regulator receiver domain F11_RS07205 PF01627 Hpt domain F11_RS07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS07205 PF09078 CheY binding F11_RS07205 PF01584 CheW-like domain F11_RS07205 PF02895 Signal transducing histidine kinase, homodimeric domain F11_RS07210 PF01584 CheW-like domain F11_RS07215 PF00672 HAMP domain F11_RS07215 PF02203 Tar ligand binding domain homologue F11_RS07215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS07220 PF01584 CheW-like domain F11_RS07225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS07230 PF02203 Tar ligand binding domain homologue F11_RS07230 PF00672 HAMP domain F11_RS07230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS07235 PF03705 CheR methyltransferase, all-alpha domain F11_RS07235 PF01739 CheR methyltransferase, SAM binding domain F11_RS07240 PF00072 Response regulator receiver domain F11_RS07240 PF01339 CheB methylesterase F11_RS07245 PF03975 CheD chemotactic sensory transduction F11_RS07255 PF02652 L-lactate permease F11_RS07265 PF02589 LUD domain F11_RS07270 PF11870 Domain of unknown function (DUF3390) F11_RS07270 PF13183 4Fe-4S dicluster domain F11_RS07270 PF02589 LUD domain F11_RS07275 PF02754 Cysteine-rich domain F11_RS07280 PF00392 Bacterial regulatory proteins, gntR family F11_RS07280 PF07729 FCD domain F11_RS07295 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS07295 PF13192 Thioredoxin domain F11_RS07300 PF00578 AhpC/TSA family F11_RS07300 PF10417 C-terminal domain of 1-Cys peroxiredoxin F11_RS07305 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F11_RS07310 PF00361 Proton-conducting membrane transporter F11_RS07315 PF00146 NADH dehydrogenase F11_RS07320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F11_RS07330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F11_RS07335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F11_RS07335 PF00374 Nickel-dependent hydrogenase F11_RS07340 PF13247 4Fe-4S dicluster domain F11_RS07345 PF03063 Prismane/CO dehydrogenase family F11_RS07350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F11_RS07365 PF13545 Crp-like helix-turn-helix domain F11_RS07365 PF00027 Cyclic nucleotide-binding domain F11_RS07370 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F11_RS07370 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F11_RS07375 PF02910 Fumarate reductase flavoprotein C-term F11_RS07375 PF00890 FAD binding domain F11_RS07380 PF02445 Quinolinate synthetase A protein F11_RS07385 PF00158 Sigma-54 interaction domain F11_RS07385 PF02954 Bacterial regulatory protein, Fis family F11_RS07385 PF00072 Response regulator receiver domain F11_RS07390 PF00512 His Kinase A (phospho-acceptor) domain F11_RS07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS07395 PF00375 Sodium:dicarboxylate symporter family F11_RS07410 PF00593 TonB dependent receptor F11_RS07410 PF07715 TonB-dependent Receptor Plug Domain F11_RS07430 PF00317 Ribonucleotide reductase, all-alpha domain F11_RS07430 PF03477 ATP cone domain F11_RS07430 PF02867 Ribonucleotide reductase, barrel domain F11_RS07445 PF02374 Anion-transporting ATPase F11_RS07450 PF06953 Arsenical resistance operon trans-acting repressor ArsD F11_RS07455 PF01758 Sodium Bile acid symporter family F11_RS07460 PF01022 Bacterial regulatory protein, arsR family F11_RS07490 PF02311 AraC-like ligand binding domain F11_RS07490 PF12833 Helix-turn-helix domain F11_RS07500 PF07715 TonB-dependent Receptor Plug Domain F11_RS07500 PF00593 TonB dependent receptor F11_RS07515 PF08502 LeuA allosteric (dimerisation) domain F11_RS07515 PF00682 HMGL-like F11_RS07520 PF12833 Helix-turn-helix domain F11_RS07520 PF02311 AraC-like ligand binding domain F11_RS07540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS07540 PF03466 LysR substrate binding domain F11_RS07545 PF00871 Acetokinase family F11_RS07550 PF01515 Phosphate acetyl/butaryl transferase F11_RS07555 PF00108 Thiolase, N-terminal domain F11_RS07555 PF02803 Thiolase, C-terminal domain F11_RS07565 PF01144 Coenzyme A transferase F11_RS07570 PF01144 Coenzyme A transferase F11_RS07585 PF03600 Citrate transporter F11_RS07590 PF03831 PhnA domain F11_RS07590 PF08274 PhnA Zinc-Ribbon F11_RS07620 PF02397 Bacterial sugar transferase F11_RS07625 PF13537 Glutamine amidotransferase domain F11_RS07625 PF00733 Asparagine synthase F11_RS07630 PF03808 Glycosyl transferase WecB/TagA/CpsF family F11_RS07640 PF01370 NAD dependent epimerase/dehydratase family F11_RS07650 PF00149 Calcineurin-like phosphoesterase F11_RS07660 PF13614 AAA domain F11_RS07675 PF02350 UDP-N-acetylglucosamine 2-epimerase F11_RS07690 PF00534 Glycosyl transferases group 1 F11_RS07690 PF13439 Glycosyltransferase Family 4 F11_RS07695 PF00664 ABC transporter transmembrane region F11_RS07695 PF00005 ABC transporter F11_RS07710 PF03705 CheR methyltransferase, all-alpha domain F11_RS07710 PF01739 CheR methyltransferase, SAM binding domain F11_RS07710 PF08448 PAS fold F11_RS07710 PF01339 CheB methylesterase F11_RS07720 PF04972 BON domain F11_RS07730 PF00107 Zinc-binding dehydrogenase F11_RS07730 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS07735 PF03746 LamB/YcsF family F11_RS07740 PF02626 Carboxyltransferase domain, subdomain A and B F11_RS07745 PF02682 Carboxyltransferase domain, subdomain C and D F11_RS07750 PF00106 short chain dehydrogenase F11_RS07755 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F11_RS07755 PF01266 FAD dependent oxidoreductase F11_RS07820 PF00313 'Cold-shock' DNA-binding domain F11_RS07825 PF00753 Metallo-beta-lactamase superfamily F11_RS07840 PF00293 NUDIX domain F11_RS07845 PF13614 AAA domain F11_RS07850 PF00005 ABC transporter F11_RS07850 PF12848 ABC transporter F11_RS07860 PF13847 Methyltransferase domain F11_RS07860 PF03551 Transcriptional regulator PadR-like family F11_RS07865 PF02219 Methylenetetrahydrofolate reductase F11_RS07870 PF02310 B12 binding domain F11_RS07870 PF02607 B12 binding domain F11_RS07870 PF02965 Vitamin B12 dependent methionine synthase, activation domain F11_RS07870 PF00809 Pterin binding enzyme F11_RS07870 PF02574 Homocysteine S-methyltransferase F11_RS07885 PF00654 Voltage gated chloride channel F11_RS07890 PF01381 Helix-turn-helix F11_RS07895 PF13361 UvrD-like helicase C-terminal domain F11_RS07895 PF00580 UvrD/REP helicase N-terminal domain F11_RS07910 PF03459 TOBE domain F11_RS07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS07915 PF03466 LysR substrate binding domain F11_RS07920 PF00202 Aminotransferase class-III F11_RS07925 PF00171 Aldehyde dehydrogenase family F11_RS07930 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F11_RS07930 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F11_RS07935 PF00563 EAL domain F11_RS07935 PF13188 PAS domain F11_RS07935 PF03707 Bacterial signalling protein N terminal repeat F11_RS07935 PF00990 Diguanylate cyclase, GGDEF domain F11_RS07940 PF00563 EAL domain F11_RS07940 PF00990 Diguanylate cyclase, GGDEF domain F11_RS07940 PF03707 Bacterial signalling protein N terminal repeat F11_RS07945 PF01266 FAD dependent oxidoreductase F11_RS07950 PF01256 Carbohydrate kinase F11_RS07950 PF03853 YjeF-related protein N-terminus F11_RS07965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F11_RS07965 PF05698 Bacterial trigger factor protein (TF) C-terminus F11_RS07965 PF05697 Bacterial trigger factor protein (TF) F11_RS07970 PF00574 Clp protease F11_RS07975 PF10431 C-terminal, D2-small domain, of ClpB protein F11_RS07975 PF06689 ClpX C4-type zinc finger F11_RS07975 PF07724 AAA domain (Cdc48 subfamily) F11_RS07980 PF02190 ATP-dependent protease La (LON) substrate-binding domain F11_RS07980 PF00004 ATPase family associated with various cellular activities (AAA) F11_RS07980 PF05362 Lon protease (S16) C-terminal proteolytic domain F11_RS07985 PF00216 Bacterial DNA-binding protein F11_RS07995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS07995 PF00672 HAMP domain F11_RS07995 PF12729 Four helix bundle sensory module for signal transduction F11_RS08000 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 F11_RS08005 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F11_RS08010 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F11_RS08015 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F11_RS08025 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F11_RS08025 PF10531 SLBB domain F11_RS08025 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region F11_RS08030 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal F11_RS08030 PF00384 Molybdopterin oxidoreductase F11_RS08030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F11_RS08035 PF00146 NADH dehydrogenase F11_RS08040 PF12838 4Fe-4S dicluster domain F11_RS08045 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 F11_RS08050 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F11_RS08055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F11_RS08055 PF00361 Proton-conducting membrane transporter F11_RS08060 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus F11_RS08060 PF00361 Proton-conducting membrane transporter F11_RS08065 PF00361 Proton-conducting membrane transporter F11_RS08070 PF03099 Biotin/lipoate A/B protein ligase family F11_RS08070 PF02237 Biotin protein ligase C terminal domain F11_RS08075 PF03309 Type III pantothenate kinase F11_RS08080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain F11_RS08080 PF12706 Beta-lactamase superfamily domain F11_RS08080 PF17770 Ribonuclease J C-terminal domain F11_RS08105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F11_RS08105 PF03129 Anticodon binding domain F11_RS08110 PF01965 DJ-1/PfpI family F11_RS08110 PF12833 Helix-turn-helix domain F11_RS08115 PF12704 MacB-like periplasmic core domain F11_RS08115 PF02687 FtsX-like permease family F11_RS08120 PF00005 ABC transporter F11_RS08135 PF14579 Helix-hairpin-helix motif F11_RS08135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F11_RS08135 PF07733 Bacterial DNA polymerase III alpha NTPase domain F11_RS08135 PF02811 PHP domain F11_RS08140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS08140 PF08269 Cache domain F11_RS08145 PF08269 Cache domain F11_RS08145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS08155 PF00318 Ribosomal protein S2 F11_RS08160 PF00889 Elongation factor TS F11_RS08165 PF00696 Amino acid kinase family F11_RS08170 PF01765 Ribosome recycling factor F11_RS08175 PF01255 Putative undecaprenyl diphosphate synthase F11_RS08185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F11_RS08185 PF13288 DXP reductoisomerase C-terminal domain F11_RS08185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F11_RS08190 PF02163 Peptidase family M50 F11_RS08190 PF17820 PDZ domain F11_RS08195 PF01103 Surface antigen F11_RS08195 PF07244 Surface antigen variable number repeat F11_RS08205 PF07977 FabA-like domain F11_RS08210 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F11_RS08210 PF00132 Bacterial transferase hexapeptide (six repeats) F11_RS08215 PF17930 LpxI N-terminal domain F11_RS08215 PF06230 LpxI C-terminal domain F11_RS08220 PF02684 Lipid-A-disaccharide synthetase F11_RS08225 PF00285 Citrate synthase, C-terminal domain F11_RS08230 PF00749 tRNA synthetases class I (E and Q), catalytic domain F11_RS08235 PF03772 Competence protein F11_RS08235 PF00753 Metallo-beta-lactamase superfamily F11_RS08240 PF02562 PhoH-like protein F11_RS08245 PF11896 Domain of unknown function (DUF3416) F11_RS08245 PF00128 Alpha amylase, catalytic domain F11_RS08250 PF16657 Maltogenic Amylase, C-terminal domain F11_RS08250 PF00128 Alpha amylase, catalytic domain F11_RS08255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F11_RS08255 PF00128 Alpha amylase, catalytic domain F11_RS08260 PF02446 4-alpha-glucanotransferase F11_RS08265 PF00924 Mechanosensitive ion channel F11_RS08265 PF12795 Mechanosensitive ion channel porin domain F11_RS08265 PF12794 Mechanosensitive ion channel inner membrane domain 1 F11_RS08280 PF02492 CobW/HypB/UreG, nucleotide-binding domain F11_RS08280 PF07683 Cobalamin synthesis protein cobW C-terminal domain F11_RS08285 PF01502 Phosphoribosyl-AMP cyclohydrolase F11_RS08290 PF01053 Cys/Met metabolism PLP-dependent enzyme F11_RS08300 PF00581 Rhodanese-like domain F11_RS08305 PF00291 Pyridoxal-phosphate dependent enzyme F11_RS08330 PF01207 Dihydrouridine synthase (Dus) F11_RS08385 PF00361 Proton-conducting membrane transporter F11_RS08395 PF00361 Proton-conducting membrane transporter F11_RS08400 PF00361 Proton-conducting membrane transporter F11_RS08405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F11_RS08420 PF03334 Na+/H+ antiporter subunit F11_RS08435 PF09084 NMT1/THI5 like F11_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS08445 PF00005 ABC transporter F11_RS08490 PF06779 Uncharacterised MFS-type transporter YbfB F11_RS08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS08495 PF03466 LysR substrate binding domain F11_RS08500 PF00563 EAL domain F11_RS08500 PF00990 Diguanylate cyclase, GGDEF domain F11_RS08500 PF03707 Bacterial signalling protein N terminal repeat F11_RS08505 PF00072 Response regulator receiver domain F11_RS08520 PF12832 MFS_1 like family F11_RS08525 PF13193 AMP-binding enzyme C-terminal domain F11_RS08525 PF00501 AMP-binding enzyme F11_RS08530 PF00563 EAL domain F11_RS08530 PF05231 MASE1 F11_RS08560 PF01783 Ribosomal L32p protein family F11_RS08565 PF02504 Fatty acid synthesis protein F11_RS08570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F11_RS08570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F11_RS08575 PF00216 Bacterial DNA-binding protein F11_RS08580 PF13411 MerR HTH family regulatory protein F11_RS08610 PF03091 CutA1 divalent ion tolerance protein F11_RS08615 PF02542 YgbB family F11_RS08615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F11_RS08620 PF01578 Cytochrome C assembly protein F11_RS08625 PF01207 Dihydrouridine synthase (Dus) F11_RS08630 PF00989 PAS fold F11_RS08630 PF00512 His Kinase A (phospho-acceptor) domain F11_RS08630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS08635 PF00158 Sigma-54 interaction domain F11_RS08635 PF00072 Response regulator receiver domain F11_RS08635 PF02954 Bacterial regulatory protein, Fis family F11_RS08640 PF00672 HAMP domain F11_RS08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS08645 PF02954 Bacterial regulatory protein, Fis family F11_RS08645 PF00158 Sigma-54 interaction domain F11_RS08645 PF00072 Response regulator receiver domain F11_RS08650 PF02080 TrkA-C domain F11_RS08650 PF02254 TrkA-N domain F11_RS08655 PF01063 Amino-transferase class IV F11_RS08660 PF13419 Haloacid dehalogenase-like hydrolase F11_RS08665 PF17209 Hfq protein F11_RS08670 PF16360 GTP-binding GTPase Middle Region F11_RS08670 PF13167 GTP-binding GTPase N-terminal F11_RS08670 PF01926 50S ribosome-binding GTPase F11_RS08680 PF00459 Inositol monophosphatase family F11_RS08695 PF03819 MazG nucleotide pyrophosphohydrolase domain F11_RS08700 PF17284 Spermidine synthase tetramerisation domain F11_RS08705 PF02675 S-adenosylmethionine decarboxylase F11_RS08710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F11_RS08710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F11_RS08740 PF12706 Beta-lactamase superfamily domain F11_RS08740 PF03099 Biotin/lipoate A/B protein ligase family F11_RS08745 PF01026 TatD related DNase F11_RS08750 PF09334 tRNA synthetases class I (M) F11_RS08755 PF09115 DNA polymerase III, delta subunit, C terminal F11_RS08760 PF02223 Thymidylate kinase F11_RS08765 PF07943 Penicillin-binding protein 5, C-terminal domain F11_RS08765 PF00768 D-alanyl-D-alanine carboxypeptidase F11_RS08770 PF05036 Sporulation related domain F11_RS08770 PF03330 Lytic transglycolase F11_RS08775 PF13406 Transglycosylase SLT domain F11_RS08800 PF01042 Endoribonuclease L-PSP F11_RS08805 PF08447 PAS fold F11_RS08805 PF13426 PAS domain F11_RS08805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS08810 PF02525 Flavodoxin-like fold F11_RS08815 PF03466 LysR substrate binding domain F11_RS08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS08825 PF04143 Sulphur transport F11_RS08835 PF08267 Cobalamin-independent synthase, N-terminal domain F11_RS08835 PF01717 Cobalamin-independent synthase, Catalytic domain F11_RS08840 PF03061 Thioesterase superfamily F11_RS08865 PF01965 DJ-1/PfpI family F11_RS08870 PF00194 Eukaryotic-type carbonic anhydrase F11_RS08875 PF00270 DEAD/DEAH box helicase F11_RS08875 PF02559 CarD-like/TRCF domain F11_RS08875 PF00271 Helicase conserved C-terminal domain F11_RS08875 PF17757 UvrB interaction domain F11_RS08875 PF03461 TRCF domain F11_RS08880 PF03937 Flavinator of succinate dehydrogenase F11_RS08885 PF17191 RecG wedge domain F11_RS08885 PF00271 Helicase conserved C-terminal domain F11_RS08885 PF00270 DEAD/DEAH box helicase F11_RS08960 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F11_RS08965 PF01467 Cytidylyltransferase-like F11_RS08970 PF00521 DNA gyrase/topoisomerase IV, subunit A F11_RS08970 PF03989 DNA gyrase C-terminal domain, beta-propeller F11_RS08975 PF00436 Single-strand binding protein family F11_RS08980 PF13458 Periplasmic binding protein F11_RS08990 PF00005 ABC transporter F11_RS08995 PF00005 ABC transporter F11_RS08995 PF12399 Branched-chain amino acid ATP-binding cassette transporter F11_RS09000 PF02653 Branched-chain amino acid transport system / permease component F11_RS09000 PF11862 Domain of unknown function (DUF3382) F11_RS09005 PF02653 Branched-chain amino acid transport system / permease component F11_RS09010 PF17760 UvrA interaction domain F11_RS09010 PF17755 UvrA DNA-binding domain F11_RS09035 PF01134 Glucose inhibited division protein A F11_RS09050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F11_RS09050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F11_RS09060 PF04430 Protein of unknown function (DUF498/DUF598) F11_RS09065 PF02355 Protein export membrane protein F11_RS09065 PF07549 SecD/SecF GG Motif F11_RS09070 PF02355 Protein export membrane protein F11_RS09070 PF07549 SecD/SecF GG Motif F11_RS09075 PF02699 Preprotein translocase subunit F11_RS09085 PF01476 LysM domain F11_RS09085 PF01551 Peptidase family M23 F11_RS09095 PF01975 Survival protein SurE F11_RS09100 PF02403 Seryl-tRNA synthetase N-terminal domain F11_RS09100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F11_RS09105 PF00902 Sec-independent protein translocase protein (TatC) F11_RS09110 PF02416 mttA/Hcf106 family F11_RS09115 PF02416 mttA/Hcf106 family F11_RS09120 PF04079 Segregation and condensation complex subunit ScpB F11_RS09125 PF02616 Segregation and condensation protein ScpA F11_RS09130 PF02163 Peptidase family M50 F11_RS09135 PF00933 Glycosyl hydrolase family 3 N terminal domain F11_RS09145 PF03485 Arginyl tRNA synthetase N terminal domain F11_RS09145 PF00750 tRNA synthetases class I (R) F11_RS09145 PF05746 DALR anticodon binding domain F11_RS09150 PF01966 HD domain F11_RS09150 PF13286 Phosphohydrolase-associated domain F11_RS09155 PF01521 Iron-sulphur cluster biosynthesis F11_RS09160 PF00080 Copper/zinc superoxide dismutase (SODC) F11_RS09180 PF00920 Dehydratase family F11_RS09185 PF13545 Crp-like helix-turn-helix domain F11_RS09185 PF00027 Cyclic nucleotide-binding domain F11_RS09195 PF00034 Cytochrome c F11_RS09195 PF03150 Di-haem cytochrome c peroxidase F11_RS09210 PF00005 ABC transporter F11_RS09215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F11_RS09230 PF10458 Valyl tRNA synthetase tRNA binding arm F11_RS09230 PF00133 tRNA synthetases class I (I, L, M and V) F11_RS09230 PF08264 Anticodon-binding domain of tRNA F11_RS09240 PF02321 Outer membrane efflux protein F11_RS09275 PF02673 Bacitracin resistance protein BacA F11_RS09280 PF00583 Acetyltransferase (GNAT) family F11_RS09280 PF13380 CoA binding domain F11_RS09280 PF13607 Succinyl-CoA ligase like flavodoxin domain F11_RS09285 PF00563 EAL domain F11_RS09285 PF00990 Diguanylate cyclase, GGDEF domain F11_RS09285 PF03707 Bacterial signalling protein N terminal repeat F11_RS09290 PF01618 MotA/TolQ/ExbB proton channel family F11_RS09295 PF00691 OmpA family F11_RS09295 PF13677 Membrane MotB of proton-channel complex MotA/MotB F11_RS09315 PF12706 Beta-lactamase superfamily domain F11_RS09325 PF01546 Peptidase family M20/M25/M40 F11_RS09325 PF07687 Peptidase dimerisation domain F11_RS09335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F11_RS09335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F11_RS09340 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus F11_RS09340 PF00561 alpha/beta hydrolase fold F11_RS09350 PF03030 Inorganic H+ pyrophosphatase F11_RS09360 PF00586 AIR synthase related protein, N-terminal domain F11_RS09360 PF02769 AIR synthase related protein, C-terminal domain F11_RS09365 PF01029 NusB family F11_RS09370 PF00885 6,7-dimethyl-8-ribityllumazine synthase F11_RS09375 PF00925 GTP cyclohydrolase II F11_RS09375 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F11_RS09380 PF00677 Lumazine binding domain F11_RS09385 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F11_RS09385 PF01872 RibD C-terminal domain F11_RS09390 PF03477 ATP cone domain F11_RS09395 PF00464 Serine hydroxymethyltransferase F11_RS09400 PF02502 Ribose/Galactose Isomerase F11_RS09405 PF05443 ROS/MUCR transcriptional regulator protein F11_RS09420 PF01227 GTP cyclohydrolase I F11_RS09425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F11_RS09425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F11_RS09430 PF00378 Enoyl-CoA hydratase/isomerase F11_RS09435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F11_RS09435 PF02770 Acyl-CoA dehydrogenase, middle domain F11_RS09435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F11_RS09440 PF01053 Cys/Met metabolism PLP-dependent enzyme F11_RS09445 PF00490 Delta-aminolevulinic acid dehydratase F11_RS09460 PF01804 Penicillin amidase F11_RS09465 PF01613 Flavin reductase like domain F11_RS09470 PF01618 MotA/TolQ/ExbB proton channel family F11_RS09475 PF00691 OmpA family F11_RS09475 PF13677 Membrane MotB of proton-channel complex MotA/MotB F11_RS09485 PF04377 Arginine-tRNA-protein transferase, C terminus F11_RS09485 PF04376 Arginine-tRNA-protein transferase, N terminus F11_RS09490 PF03480 Bacterial extracellular solute-binding protein, family 7 F11_RS09500 PF03989 DNA gyrase C-terminal domain, beta-propeller F11_RS09500 PF00521 DNA gyrase/topoisomerase IV, subunit A F11_RS09505 PF02565 Recombination protein O C terminal F11_RS09505 PF11967 Recombination protein O N terminal F11_RS09515 PF01926 50S ribosome-binding GTPase F11_RS09515 PF07650 KH domain F11_RS09520 PF14622 Ribonuclease-III-like F11_RS09520 PF00035 Double-stranded RNA binding motif F11_RS09525 PF10502 Signal peptidase, peptidase S26 F11_RS09530 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F11_RS09540 PF02824 TGS domain F11_RS09540 PF13291 ACT domain F11_RS09540 PF04607 Region found in RelA / SpoT proteins F11_RS09545 PF01192 RNA polymerase Rpb6 F11_RS09550 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F11_RS09560 PF03167 Uracil DNA glycosylase superfamily F11_RS09575 PF00255 Glutathione peroxidase F11_RS09580 PF01668 SmpB protein F11_RS09585 PF00701 Dihydrodipicolinate synthetase family F11_RS09590 PF01551 Peptidase family M23 F11_RS09590 PF10145 Phage-related minor tail protein F11_RS09590 PF01464 Transglycosylase SLT domain F11_RS09600 PF01551 Peptidase family M23 F11_RS09600 PF08525 Opacity-associated protein A N-terminal motif F11_RS09600 PF01476 LysM domain F11_RS09605 PF04608 Phosphatidylglycerophosphatase A F11_RS09610 PF02464 Competence-damaged protein F11_RS09635 PF00512 His Kinase A (phospho-acceptor) domain F11_RS09635 PF08446 PAS fold F11_RS09635 PF00360 Phytochrome region F11_RS09635 PF01590 GAF domain F11_RS09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS09645 PF04055 Radical SAM superfamily F11_RS09645 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F11_RS09650 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS09650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F11_RS09655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F11_RS09655 PF00364 Biotin-requiring enzyme F11_RS09655 PF02817 e3 binding domain F11_RS09660 PF02780 Transketolase, C-terminal domain F11_RS09660 PF00364 Biotin-requiring enzyme F11_RS09660 PF02779 Transketolase, pyrimidine binding domain F11_RS09665 PF00676 Dehydrogenase E1 component F11_RS09675 PF01544 CorA-like Mg2+ transporter protein F11_RS09680 PF13426 PAS domain F11_RS09680 PF00989 PAS fold F11_RS09680 PF13188 PAS domain F11_RS09680 PF00512 His Kinase A (phospho-acceptor) domain F11_RS09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS09685 PF03952 Enolase, N-terminal domain F11_RS09685 PF00113 Enolase, C-terminal TIM barrel domain F11_RS09690 PF00793 DAHP synthetase I family F11_RS09695 PF00117 Glutamine amidotransferase class-I F11_RS09695 PF06418 CTP synthase N-terminus F11_RS09700 PF03840 Preprotein translocase SecG subunit F11_RS09705 PF00121 Triosephosphate isomerase F11_RS09715 PF04715 Anthranilate synthase component I, N terminal region F11_RS09715 PF00425 chorismate binding enzyme F11_RS09730 PF00403 Heavy-metal-associated domain F11_RS09735 PF00117 Glutamine amidotransferase class-I F11_RS09740 PF00591 Glycosyl transferase family, a/b domain F11_RS09740 PF02885 Glycosyl transferase family, helical bundle domain F11_RS09745 PF00218 Indole-3-glycerol phosphate synthase F11_RS09750 PF00717 Peptidase S24-like F11_RS09750 PF01726 LexA DNA binding domain F11_RS09755 PF07670 Nucleoside recognition F11_RS09760 PF01037 Lrp/AsnC ligand binding domain F11_RS09765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS09765 PF00672 HAMP domain F11_RS09765 PF02743 Cache domain F11_RS09770 PF02608 ABC transporter substrate-binding protein PnrA-like F11_RS09775 PF02653 Branched-chain amino acid transport system / permease component F11_RS09780 PF02653 Branched-chain amino acid transport system / permease component F11_RS09785 PF00005 ABC transporter F11_RS09790 PF01740 STAS domain F11_RS09790 PF00916 Sulfate permease family F11_RS09795 PF01641 SelR domain F11_RS09800 PF00990 Diguanylate cyclase, GGDEF domain F11_RS09835 PF00313 'Cold-shock' DNA-binding domain F11_RS09840 PF00270 DEAD/DEAH box helicase F11_RS09840 PF00271 Helicase conserved C-terminal domain F11_RS09845 PF00111 2Fe-2S iron-sulfur cluster binding domain F11_RS09850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS09860 PF12911 N-terminal TM domain of oligopeptide transport permease C F11_RS09860 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS09865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS09865 PF00005 ABC transporter F11_RS09870 PF00005 ABC transporter F11_RS09870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS09885 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase F11_RS09890 PF00392 Bacterial regulatory proteins, gntR family F11_RS09890 PF00155 Aminotransferase class I and II F11_RS09900 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain F11_RS09900 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain F11_RS09905 PF00682 HMGL-like F11_RS09905 PF08502 LeuA allosteric (dimerisation) domain F11_RS09910 PF01507 Phosphoadenosine phosphosulfate reductase family F11_RS09920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F11_RS09920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F11_RS09930 PF10414 Sirohaem synthase dimerisation region F11_RS09930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F11_RS09935 PF00440 Bacterial regulatory proteins, tetR family F11_RS09935 PF18665 Tetracyclin repressor-like, C-terminal domain F11_RS09940 PF03472 Autoinducer binding domain F11_RS09940 PF00196 Bacterial regulatory proteins, luxR family F11_RS09955 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F11_RS09960 PF00849 RNA pseudouridylate synthase F11_RS09965 PF00682 HMGL-like F11_RS09970 PF00289 Biotin carboxylase, N-terminal domain F11_RS09970 PF00364 Biotin-requiring enzyme F11_RS09970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F11_RS09970 PF02785 Biotin carboxylase C-terminal domain F11_RS09975 PF00378 Enoyl-CoA hydratase/isomerase F11_RS09980 PF01039 Carboxyl transferase domain F11_RS09985 PF01323 DSBA-like thioredoxin domain F11_RS09990 PF00106 short chain dehydrogenase F11_RS09995 PF02803 Thiolase, C-terminal domain F11_RS09995 PF00108 Thiolase, N-terminal domain F11_RS10005 PF02770 Acyl-CoA dehydrogenase, middle domain F11_RS10005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F11_RS10005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F11_RS10015 PF03459 TOBE domain F11_RS10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS10020 PF02311 AraC-like ligand binding domain F11_RS10020 PF12833 Helix-turn-helix domain F11_RS10035 PF13533 Biotin-lipoyl like F11_RS10050 PF06508 Queuosine biosynthesis protein QueC F11_RS10055 PF00571 CBS domain F11_RS10055 PF00478 IMP dehydrogenase / GMP reductase domain F11_RS10060 PF04055 Radical SAM superfamily F11_RS10065 PF01596 O-methyltransferase F11_RS10070 PF00440 Bacterial regulatory proteins, tetR family F11_RS10080 PF00206 Lyase F11_RS10080 PF10397 Adenylosuccinate lyase C-terminus F11_RS10085 PF00709 Adenylosuccinate synthetase F11_RS10100 PF00082 Subtilase family F11_RS10115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F11_RS10120 PF00294 pfkB family carbohydrate kinase F11_RS10125 PF02896 PEP-utilising enzyme, TIM barrel domain F11_RS10125 PF00391 PEP-utilising enzyme, mobile domain F11_RS10125 PF05524 PEP-utilising enzyme, N-terminal F11_RS10125 PF00381 PTS HPr component phosphorylation site F11_RS10125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F11_RS10130 PF00356 Bacterial regulatory proteins, lacI family F11_RS10145 PF00501 AMP-binding enzyme F11_RS10145 PF14535 AMP-binding enzyme C-terminal domain F11_RS10160 PF00291 Pyridoxal-phosphate dependent enzyme F11_RS10175 PF02810 SEC-C motif F11_RS10200 PF05343 M42 glutamyl aminopeptidase F11_RS10205 PF02875 Mur ligase family, glutamate ligase domain F11_RS10205 PF08245 Mur ligase middle domain F11_RS10205 PF08443 RimK-like ATP-grasp domain F11_RS10210 PF13537 Glutamine amidotransferase domain F11_RS10210 PF00733 Asparagine synthase F11_RS10225 PF03960 ArsC family F11_RS10235 PF13411 MerR HTH family regulatory protein F11_RS10240 PF03448 MgtE intracellular N domain F11_RS10240 PF01769 Divalent cation transporter F11_RS10240 PF00571 CBS domain F11_RS10250 PF03099 Biotin/lipoate A/B protein ligase family F11_RS10260 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain F11_RS10270 PF07883 Cupin domain F11_RS10280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F11_RS10285 PF11842 Domain of unknown function (DUF3362) F11_RS10285 PF08497 Radical SAM N-terminal F11_RS10285 PF04055 Radical SAM superfamily F11_RS10290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS10290 PF03466 LysR substrate binding domain F11_RS10295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F11_RS10295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F11_RS10295 PF02770 Acyl-CoA dehydrogenase, middle domain F11_RS10300 PF02515 CoA-transferase family III F11_RS10305 PF00892 EamA-like transporter family F11_RS10310 PF13667 ThiC-associated domain F11_RS10310 PF01964 Radical SAM ThiC family F11_RS10315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F11_RS10315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F11_RS10320 PF00266 Aminotransferase class-V F11_RS10325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS10325 PF00005 ABC transporter F11_RS10330 PF12911 N-terminal TM domain of oligopeptide transport permease C F11_RS10330 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS10335 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS10340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS10345 PF00226 DnaJ domain F11_RS10345 PF01556 DnaJ C terminal domain F11_RS10365 PF01381 Helix-turn-helix F11_RS10365 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system F11_RS10370 PF01381 Helix-turn-helix F11_RS10390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS10390 PF00672 HAMP domain F11_RS10400 PF03070 TENA/THI-4/PQQC family F11_RS10405 PF00111 2Fe-2S iron-sulfur cluster binding domain F11_RS10410 PF00266 Aminotransferase class-V F11_RS10415 PF02082 Transcriptional regulator F11_RS10420 PF00132 Bacterial transferase hexapeptide (six repeats) F11_RS10425 PF02129 X-Pro dipeptidyl-peptidase (S15 family) F11_RS10430 PF03702 Anhydro-N-acetylmuramic acid kinase F11_RS10435 PF00579 tRNA synthetases class I (W and Y) F11_RS10440 PF00072 Response regulator receiver domain F11_RS10440 PF01627 Hpt domain F11_RS10440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS10440 PF17149 Periplasmic sensor domain found in signal transduction proteins F11_RS10440 PF00512 His Kinase A (phospho-acceptor) domain F11_RS10440 PF00672 HAMP domain F11_RS10445 PF01384 Phosphate transporter family F11_RS10465 PF03710 Glutamate-ammonia ligase adenylyltransferase F11_RS10465 PF08335 GlnD PII-uridylyltransferase F11_RS10470 PF12146 Serine aminopeptidase, S33 F11_RS10475 PF03462 PCRF domain F11_RS10475 PF00472 RF-1 domain F11_RS10480 PF00202 Aminotransferase class-III F11_RS10500 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS10505 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS10515 PF08402 TOBE domain F11_RS10515 PF00005 ABC transporter F11_RS10525 PF00529 HlyD membrane-fusion protein of T1SS F11_RS10525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F11_RS10530 PF00873 AcrB/AcrD/AcrF family F11_RS10535 PF02321 Outer membrane efflux protein F11_RS10540 PF02441 Flavoprotein F11_RS10550 PF01343 Peptidase family S49 F11_RS10550 PF06965 Na+/H+ antiporter 1 F11_RS10555 PF00484 Carbonic anhydrase F11_RS10560 PF03205 Molybdopterin guanine dinucleotide synthesis protein B F11_RS10565 PF09456 RcsC Alpha-Beta-Loop (ABL) F11_RS10565 PF00072 Response regulator receiver domain F11_RS10565 PF00512 His Kinase A (phospho-acceptor) domain F11_RS10565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS10570 PF01966 HD domain F11_RS10575 PF01565 FAD binding domain F11_RS10575 PF13183 4Fe-4S dicluster domain F11_RS10575 PF02913 FAD linked oxidases, C-terminal domain F11_RS10590 PF00392 Bacterial regulatory proteins, gntR family F11_RS10600 PF05544 Proline racemase F11_RS10605 PF00701 Dihydrodipicolinate synthetase family F11_RS10615 PF02142 MGS-like domain F11_RS10625 PF01266 FAD dependent oxidoreductase F11_RS10630 PF00171 Aldehyde dehydrogenase family F11_RS10635 PF02938 GAD domain F11_RS10635 PF01336 OB-fold nucleic acid binding domain F11_RS10635 PF00152 tRNA synthetases class II (D, K and N) F11_RS10640 PF00570 HRDC domain F11_RS10640 PF01612 3'-5' exonuclease F11_RS10650 PF01053 Cys/Met metabolism PLP-dependent enzyme F11_RS10655 PF08269 Cache domain F11_RS10655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS10660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS10660 PF08269 Cache domain F11_RS10665 PF00120 Glutamine synthetase, catalytic domain F11_RS10685 PF05981 CreA protein F11_RS10695 PF00155 Aminotransferase class I and II F11_RS10700 PF00543 Nitrogen regulatory protein P-II F11_RS10705 PF00120 Glutamine synthetase, catalytic domain F11_RS10705 PF03951 Glutamine synthetase, beta-Grasp domain F11_RS10710 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS10715 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS10720 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS10725 PF00005 ABC transporter F11_RS10745 PF00873 AcrB/AcrD/AcrF family F11_RS10755 PF17854 FtsK alpha domain F11_RS10755 PF01580 FtsK/SpoIIIE family F11_RS10755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F11_RS10755 PF09397 Ftsk gamma domain F11_RS10770 PF07244 Surface antigen variable number repeat F11_RS10770 PF01103 Surface antigen F11_RS10775 PF01925 Sulfite exporter TauE/SafE F11_RS10785 PF02515 CoA-transferase family III F11_RS10790 PF00005 ABC transporter F11_RS10805 PF05958 tRNA (Uracil-5-)-methyltransferase F11_RS10810 PF00512 His Kinase A (phospho-acceptor) domain F11_RS10810 PF01627 Hpt domain F11_RS10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS10810 PF00072 Response regulator receiver domain F11_RS10815 PF10431 C-terminal, D2-small domain, of ClpB protein F11_RS10815 PF00004 ATPase family associated with various cellular activities (AAA) F11_RS10815 PF07724 AAA domain (Cdc48 subfamily) F11_RS10815 PF02861 Clp amino terminal domain, pathogenicity island component F11_RS10815 PF17871 AAA lid domain F11_RS10820 PF02617 ATP-dependent Clp protease adaptor protein ClpS F11_RS10835 PF07943 Penicillin-binding protein 5, C-terminal domain F11_RS10835 PF00768 D-alanyl-D-alanine carboxypeptidase F11_RS10840 PF04932 O-Antigen ligase F11_RS10845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F11_RS10845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F11_RS10845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F11_RS10845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F11_RS10850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F11_RS10850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F11_RS10850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F11_RS10855 PF00483 Nucleotidyl transferase F11_RS10865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F11_RS10865 PF00384 Molybdopterin oxidoreductase F11_RS10865 PF01568 Molydopterin dinucleotide binding domain F11_RS10870 PF00975 Thioesterase domain F11_RS10870 PF08990 Erythronolide synthase docking F11_RS10870 PF00698 Acyl transferase domain F11_RS10870 PF00550 Phosphopantetheine attachment site F11_RS10870 PF08659 KR domain F11_RS10870 PF00109 Beta-ketoacyl synthase, N-terminal domain F11_RS10870 PF16197 Ketoacyl-synthetase C-terminal extension F11_RS10870 PF02801 Beta-ketoacyl synthase, C-terminal domain F11_RS10885 PF00535 Glycosyl transferase family 2 F11_RS10895 PF01557 Fumarylacetoacetate (FAA) hydrolase family F11_RS10900 PF00106 short chain dehydrogenase F11_RS10910 PF00206 Lyase F11_RS10910 PF10415 Fumarase C C-terminus F11_RS10915 PF01810 LysE type translocator F11_RS10950 PF13632 Glycosyl transferase family group 2 F11_RS10960 PF04349 Periplasmic glucan biosynthesis protein, MdoG F11_RS11005 PF13847 Methyltransferase domain F11_RS11010 PF09857 Putative toxin of bacterial toxin-antitoxin pair F11_RS11020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS11025 PF17092 Penicillin-binding protein OB-like domain F11_RS11025 PF00912 Transglycosylase F11_RS11025 PF00905 Penicillin binding protein transpeptidase domain F11_RS11030 PF11741 AMIN domain F11_RS11030 PF01520 N-acetylmuramoyl-L-alanine amidase F11_RS11035 PF00575 S1 RNA binding domain F11_RS11035 PF10150 Ribonuclease E/G family F11_RS11035 PF12111 Polyribonucleotide phosphorylase C terminal F11_RS11050 PF00380 Ribosomal protein S9/S16 F11_RS11055 PF00572 Ribosomal protein L13 F11_RS11065 PF02472 Biopolymer transport protein ExbD/TolR F11_RS11070 PF01618 MotA/TolQ/ExbB proton channel family F11_RS11075 PF00378 Enoyl-CoA hydratase/isomerase F11_RS11085 PF00158 Sigma-54 interaction domain F11_RS11085 PF02954 Bacterial regulatory protein, Fis family F11_RS11085 PF00072 Response regulator receiver domain F11_RS11090 PF02633 Creatinine amidohydrolase F11_RS11095 PF02541 Ppx/GppA phosphatase family F11_RS11100 PF13090 Polyphosphate kinase C-terminal domain 2 F11_RS11100 PF02503 Polyphosphate kinase middle domain F11_RS11100 PF13089 Polyphosphate kinase N-terminal domain F11_RS11100 PF17941 Polyphosphate kinase C-terminal domain 1 F11_RS11115 PF01594 AI-2E family transporter F11_RS11120 PF01066 CDP-alcohol phosphatidyltransferase F11_RS11130 PF00586 AIR synthase related protein, N-terminal domain F11_RS11130 PF02769 AIR synthase related protein, C-terminal domain F11_RS11135 PF00551 Formyl transferase F11_RS11140 PF00334 Nucleoside diphosphate kinase F11_RS11145 PF00005 ABC transporter F11_RS11145 PF12848 ABC transporter F11_RS11150 PF13458 Periplasmic binding protein F11_RS11160 PF00883 Cytosol aminopeptidase family, catalytic domain F11_RS11165 PF00005 ABC transporter F11_RS11165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS11170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS11170 PF00005 ABC transporter F11_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS11180 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS11185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS11190 PF00196 Bacterial regulatory proteins, luxR family F11_RS11195 PF00561 alpha/beta hydrolase fold F11_RS11200 PF02233 NAD(P) transhydrogenase beta subunit F11_RS11205 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F11_RS11210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F11_RS11210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F11_RS11225 PF13358 DDE superfamily endonuclease F11_RS11235 PF00872 Transposase, Mutator family F11_RS11240 PF00872 Transposase, Mutator family F11_RS11245 PF00501 AMP-binding enzyme F11_RS11255 PF03109 ABC1 family F11_RS11260 PF01575 MaoC like domain F11_RS11265 PF00210 Ferritin-like domain F11_RS11275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F11_RS11280 PF01980 tRNA-methyltransferase O F11_RS11295 PF13180 PDZ domain F11_RS11300 PF01145 SPFH domain / Band 7 family F11_RS11305 PF01145 SPFH domain / Band 7 family F11_RS11310 PF10609 NUBPL iron-transfer P-loop NTPase F11_RS11310 PF01883 Iron-sulfur cluster assembly protein F11_RS11320 PF05681 Fumarate hydratase (Fumerase) F11_RS11320 PF05683 Fumarase C-terminus F11_RS11340 PF00300 Histidine phosphatase superfamily (branch 1) F11_RS11355 PF13181 Tetratricopeptide repeat F11_RS11360 PF03466 LysR substrate binding domain F11_RS11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS11365 PF03466 LysR substrate binding domain F11_RS11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS11385 PF02152 Dihydroneopterin aldolase F11_RS11390 PF01541 GIY-YIG catalytic domain F11_RS11390 PF02151 UvrB/uvrC motif F11_RS11390 PF08459 UvrC Helix-hairpin-helix N-terminal F11_RS11395 PF01066 CDP-alcohol phosphatidyltransferase F11_RS11400 PF00994 Probable molybdopterin binding domain F11_RS11400 PF03453 MoeA N-terminal region (domain I and II) F11_RS11400 PF03454 MoeA C-terminal region (domain IV) F11_RS11405 PF01063 Amino-transferase class IV F11_RS11410 PF12802 MarR family F11_RS11415 PF00072 Response regulator receiver domain F11_RS11415 PF00486 Transcriptional regulatory protein, C terminal F11_RS11420 PF00512 His Kinase A (phospho-acceptor) domain F11_RS11420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS11420 PF00672 HAMP domain F11_RS11430 PF05230 MASE2 domain F11_RS11430 PF00990 Diguanylate cyclase, GGDEF domain F11_RS11450 PF00072 Response regulator receiver domain F11_RS11450 PF00196 Bacterial regulatory proteins, luxR family F11_RS11460 PF00072 Response regulator receiver domain F11_RS11465 PF01590 GAF domain F11_RS11465 PF00360 Phytochrome region F11_RS11465 PF13426 PAS domain F11_RS11465 PF08446 PAS fold F11_RS11475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F11_RS11475 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F11_RS11485 PF03480 Bacterial extracellular solute-binding protein, family 7 F11_RS11490 PF00378 Enoyl-CoA hydratase/isomerase F11_RS11510 PF00343 Carbohydrate phosphorylase F11_RS11515 PF00534 Glycosyl transferases group 1 F11_RS11515 PF08323 Starch synthase catalytic domain F11_RS11520 PF00483 Nucleotidyl transferase F11_RS11535 PF01212 Beta-eliminating lyase F11_RS11540 PF00005 ABC transporter F11_RS11545 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS11550 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS11555 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS11570 PF01322 Cytochrome C' F11_RS11575 PF03466 LysR substrate binding domain F11_RS11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS11605 PF00689 Cation transporting ATPase, C-terminus F11_RS11605 PF00690 Cation transporter/ATPase, N-terminus F11_RS11620 PF01012 Electron transfer flavoprotein domain F11_RS11620 PF00766 Electron transfer flavoprotein FAD-binding domain F11_RS11625 PF01012 Electron transfer flavoprotein domain F11_RS11630 PF03206 Nitrogen fixation protein NifW F11_RS11635 PF00682 HMGL-like F11_RS11640 PF01592 NifU-like N terminal domain F11_RS11640 PF01106 NifU-like domain F11_RS11645 PF01521 Iron-sulphur cluster biosynthesis F11_RS11650 PF03073 TspO/MBR family F11_RS11655 PF00005 ABC transporter F11_RS11660 PF00005 ABC transporter F11_RS11665 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS11670 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS11675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS11695 PF04891 NifQ F11_RS11700 PF13237 4Fe-4S dicluster domain F11_RS11705 PF03270 Protein of unknown function, DUF269 F11_RS11710 PF02579 Dinitrogenase iron-molybdenum cofactor F11_RS11715 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS11720 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS11735 PF01507 Phosphoadenosine phosphosulfate reductase family F11_RS11740 PF00009 Elongation factor Tu GTP binding domain F11_RS11745 PF01223 DNA/RNA non-specific endonuclease F11_RS11760 PF00128 Alpha amylase, catalytic domain F11_RS11765 PF11941 Domain of unknown function (DUF3459) F11_RS11765 PF00128 Alpha amylase, catalytic domain F11_RS11765 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F11_RS11770 PF02592 Putative vitamin uptake transporter F11_RS11775 PF00294 pfkB family carbohydrate kinase F11_RS11785 PF02653 Branched-chain amino acid transport system / permease component F11_RS11790 PF02653 Branched-chain amino acid transport system / permease component F11_RS11795 PF00005 ABC transporter F11_RS11800 PF13407 Periplasmic binding protein domain F11_RS11805 PF01791 DeoC/LacD family aldolase F11_RS11810 PF08220 DeoR-like helix-turn-helix domain F11_RS11810 PF00455 DeoR C terminal sensor domain F11_RS11835 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS11835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F11_RS11850 PF07715 TonB-dependent Receptor Plug Domain F11_RS11870 PF01381 Helix-turn-helix F11_RS11870 PF06114 IrrE N-terminal-like domain F11_RS11870 PF09856 Predicted transcriptional regulator (DUF2083) F11_RS11875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F11_RS11875 PF00682 HMGL-like F11_RS11875 PF02785 Biotin carboxylase C-terminal domain F11_RS11875 PF02436 Conserved carboxylase domain F11_RS11875 PF00364 Biotin-requiring enzyme F11_RS11875 PF00289 Biotin carboxylase, N-terminal domain F11_RS11880 PF03972 MmgE/PrpD family F11_RS11885 PF00285 Citrate synthase, C-terminal domain F11_RS11895 PF00672 HAMP domain F11_RS11895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS11900 PF01584 CheW-like domain F11_RS11905 PF00072 Response regulator receiver domain F11_RS11905 PF01339 CheB methylesterase F11_RS11915 PF03705 CheR methyltransferase, all-alpha domain F11_RS11915 PF01739 CheR methyltransferase, SAM binding domain F11_RS11920 PF01584 CheW-like domain F11_RS11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS11920 PF01627 Hpt domain F11_RS11920 PF00072 Response regulator receiver domain F11_RS11925 PF02895 Signal transducing histidine kinase, homodimeric domain F11_RS11925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS11925 PF01584 CheW-like domain F11_RS11925 PF01627 Hpt domain F11_RS11925 PF07194 P2 response regulator binding domain F11_RS11935 PF13614 AAA domain F11_RS11940 PF00072 Response regulator receiver domain F11_RS11950 PF00512 His Kinase A (phospho-acceptor) domain F11_RS11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS11950 PF08448 PAS fold F11_RS11950 PF00072 Response regulator receiver domain F11_RS11950 PF13188 PAS domain F11_RS11955 PF13426 PAS domain F11_RS11955 PF08447 PAS fold F11_RS11955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS11965 PF12833 Helix-turn-helix domain F11_RS11965 PF02311 AraC-like ligand binding domain F11_RS11975 PF00593 TonB dependent receptor F11_RS11975 PF07715 TonB-dependent Receptor Plug Domain F11_RS11985 PF00005 ABC transporter F11_RS11990 PF04954 Siderophore-interacting protein F11_RS11990 PF00005 ABC transporter F11_RS11990 PF00664 ABC transporter transmembrane region F11_RS11990 PF08021 Siderophore-interacting FAD-binding domain F11_RS12010 PF01930 Domain of unknown function DUF83 F11_RS12035 PF13439 Glycosyltransferase Family 4 F11_RS12045 PF13649 Methyltransferase domain F11_RS12050 PF05711 Macrocin-O-methyltransferase (TylF) F11_RS12090 PF01928 CYTH domain F11_RS12090 PF05235 CHAD domain F11_RS12100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS12105 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS12110 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS12110 PF12911 N-terminal TM domain of oligopeptide transport permease C F11_RS12115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS12115 PF00005 ABC transporter F11_RS12120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS12120 PF00005 ABC transporter F11_RS12125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS12125 PF01627 Hpt domain F11_RS12125 PF00072 Response regulator receiver domain F11_RS12125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F11_RS12125 PF00672 HAMP domain F11_RS12125 PF00512 His Kinase A (phospho-acceptor) domain F11_RS12130 PF01625 Peptide methionine sulfoxide reductase F11_RS12145 PF00270 DEAD/DEAH box helicase F11_RS12145 PF04408 Helicase associated domain (HA2) F11_RS12145 PF00271 Helicase conserved C-terminal domain F11_RS12145 PF08482 ATP-dependent helicase C-terminal F11_RS12150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS12150 PF08269 Cache domain F11_RS12165 PF07995 Glucose / Sorbosone dehydrogenase F11_RS12180 PF04542 Sigma-70 region 2 F11_RS12180 PF08281 Sigma-70, region 4 F11_RS12190 PF00593 TonB dependent receptor F11_RS12190 PF07715 TonB-dependent Receptor Plug Domain F11_RS12205 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH F11_RS12220 PF07690 Major Facilitator Superfamily F11_RS12225 PF08212 Lipocalin-like domain F11_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS12235 PF00005 ABC transporter F11_RS12240 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS12245 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F11_RS12265 PF00005 ABC transporter F11_RS12295 PF07715 TonB-dependent Receptor Plug Domain F11_RS12295 PF00593 TonB dependent receptor F11_RS12305 PF04542 Sigma-70 region 2 F11_RS12305 PF12680 SnoaL-like domain F11_RS12305 PF08281 Sigma-70, region 4 F11_RS12310 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase F11_RS12310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F11_RS12310 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg F11_RS12310 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II F11_RS12310 PF10371 Domain of unknown function F11_RS12320 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain F11_RS12320 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain F11_RS12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS12325 PF03466 LysR substrate binding domain F11_RS12330 PF00834 Ribulose-phosphate 3 epimerase family F11_RS12335 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F11_RS12340 PF00485 Phosphoribulokinase / Uridine kinase family F11_RS12345 PF02779 Transketolase, pyrimidine binding domain F11_RS12345 PF02780 Transketolase, C-terminal domain F11_RS12345 PF00456 Transketolase, thiamine diphosphate binding domain F11_RS12350 PF00072 Response regulator receiver domain F11_RS12350 PF13426 PAS domain F11_RS12350 PF08448 PAS fold F11_RS12350 PF00512 His Kinase A (phospho-acceptor) domain F11_RS12350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS12360 PF02272 DHHA1 domain F11_RS12360 PF01368 DHH family F11_RS12360 PF17768 RecJ OB domain F11_RS12365 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F11_RS12370 PF01842 ACT domain F11_RS12370 PF03447 Homoserine dehydrogenase, NAD binding domain F11_RS12370 PF00742 Homoserine dehydrogenase F11_RS12375 PF00155 Aminotransferase class I and II F11_RS12380 PF13488 Glycine zipper F11_RS12380 PF00691 OmpA family F11_RS12385 PF00561 alpha/beta hydrolase fold F11_RS12385 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus F11_RS12405 PF03180 NLPA lipoprotein F11_RS12410 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS12415 PF00005 ABC transporter F11_RS12415 PF09383 NIL domain F11_RS12420 PF00132 Bacterial transferase hexapeptide (six repeats) F11_RS12425 PF02774 Semialdehyde dehydrogenase, dimerisation domain F11_RS12425 PF01118 Semialdehyde dehydrogenase, NAD binding domain F11_RS12435 PF00155 Aminotransferase class I and II F11_RS12450 PF03788 LrgA family F11_RS12455 PF04172 LrgB-like family F11_RS12470 PF01381 Helix-turn-helix F11_RS12475 PF00460 Flagella basal body rod protein F11_RS12475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F11_RS12475 PF07559 Flagellar basal body protein FlaE F11_RS12480 PF05690 Thiazole biosynthesis protein ThiG F11_RS12485 PF01220 Dehydroquinase class II F11_RS12490 PF00364 Biotin-requiring enzyme F11_RS12495 PF02785 Biotin carboxylase C-terminal domain F11_RS12495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F11_RS12495 PF00289 Biotin carboxylase, N-terminal domain F11_RS12500 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F11_RS12525 PF02867 Ribonucleotide reductase, barrel domain F11_RS12525 PF08471 Class II vitamin B12-dependent ribonucleotide reductase F11_RS12535 PF13657 HipA N-terminal domain F11_RS12535 PF07804 HipA-like C-terminal domain F11_RS12545 PF02405 Permease MlaE F11_RS12550 PF00005 ABC transporter F11_RS12555 PF02470 MlaD protein F11_RS12575 PF00990 Diguanylate cyclase, GGDEF domain F11_RS12585 PF03600 Citrate transporter F11_RS12600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F11_RS12600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F11_RS12620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS12630 PF04107 Glutamate-cysteine ligase family 2(GCS2) F11_RS12640 PF13660 Domain of unknown function (DUF4147) F11_RS12640 PF05161 MOFRL family F11_RS12645 PF02887 Pyruvate kinase, alpha/beta domain F11_RS12645 PF00224 Pyruvate kinase, barrel domain F11_RS12650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F11_RS12655 PF00444 Ribosomal protein L36 F11_RS12665 PF04023 FeoA domain F11_RS12670 PF07664 Ferrous iron transport protein B C terminus F11_RS12670 PF02421 Ferrous iron transport protein B F11_RS12670 PF07670 Nucleoside recognition F11_RS12685 PF00512 His Kinase A (phospho-acceptor) domain F11_RS12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS12685 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS12690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS12695 PF00005 ABC transporter F11_RS12695 PF00571 CBS domain F11_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS12705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F11_RS12715 PF01642 Methylmalonyl-CoA mutase F11_RS12715 PF02310 B12 binding domain F11_RS12720 PF01642 Methylmalonyl-CoA mutase F11_RS12735 PF02872 5'-nucleotidase, C-terminal domain F11_RS12735 PF00149 Calcineurin-like phosphoesterase F11_RS12740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS12740 PF08269 Cache domain F11_RS12745 PF00982 Glycosyltransferase family 20 F11_RS12750 PF02685 Glucokinase F11_RS12765 PF00199 Catalase F11_RS12765 PF06628 Catalase-related immune-responsive F11_RS12770 PF02311 AraC-like ligand binding domain F11_RS12770 PF12833 Helix-turn-helix domain F11_RS12780 PF00534 Glycosyl transferases group 1 F11_RS12780 PF13439 Glycosyltransferase Family 4 F11_RS12785 PF00534 Glycosyl transferases group 1 F11_RS12790 PF00535 Glycosyl transferase family 2 F11_RS12795 PF00535 Glycosyl transferase family 2 F11_RS12805 PF00009 Elongation factor Tu GTP binding domain F11_RS12805 PF16658 Class II release factor RF3, C-terminal domain F11_RS12805 PF03144 Elongation factor Tu domain 2 F11_RS12810 PF00005 ABC transporter F11_RS12815 PF01061 ABC-2 type transporter F11_RS12820 PF01206 Sulfurtransferase TusA F11_RS12835 PF04304 Protein of unknown function (DUF454) F11_RS12840 PF01261 Xylose isomerase-like TIM barrel F11_RS12845 PF04055 Radical SAM superfamily F11_RS12850 PF00072 Response regulator receiver domain F11_RS12850 PF00486 Transcriptional regulatory protein, C terminal F11_RS12855 PF00378 Enoyl-CoA hydratase/isomerase F11_RS12860 PF00156 Phosphoribosyl transferase domain F11_RS12865 PF00155 Aminotransferase class I and II F11_RS12880 PF17151 Periplasmic sensor domain F11_RS12880 PF00990 Diguanylate cyclase, GGDEF domain F11_RS12890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain F11_RS12890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain F11_RS12895 PF05951 Bacterial protein of unknown function (DUF882) F11_RS12900 PF00497 Bacterial extracellular solute-binding proteins, family 3 F11_RS12905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS12905 PF00512 His Kinase A (phospho-acceptor) domain F11_RS12910 PF13193 AMP-binding enzyme C-terminal domain F11_RS12910 PF00501 AMP-binding enzyme F11_RS12915 PF01914 MarC family integral membrane protein F11_RS12920 PF01679 Proteolipid membrane potential modulator F11_RS12925 PF17092 Penicillin-binding protein OB-like domain F11_RS12925 PF00912 Transglycosylase F11_RS12925 PF00905 Penicillin binding protein transpeptidase domain F11_RS12930 PF13086 AAA domain F11_RS12930 PF13087 AAA domain F11_RS12930 PF13195 Protein of unknown function (DUF4011) F11_RS12935 PF13460 NAD(P)H-binding F11_RS12950 PF01136 Peptidase family U32 F11_RS12985 PF00460 Flagella basal body rod protein F11_RS12985 PF07559 Flagellar basal body protein FlaE F11_RS12985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F11_RS12990 PF03963 Flagellar hook capping protein - N-terminal region F11_RS12990 PF13861 FlgD Tudor-like domain F11_RS12990 PF13860 FlgD Ig-like domain F11_RS12995 PF00700 Bacterial flagellin C-terminal helical region F11_RS12995 PF00669 Bacterial flagellin N-terminal helical region F11_RS13000 PF02465 Flagellar hook-associated protein 2 N-terminus F11_RS13000 PF07195 Flagellar hook-associated protein 2 C-terminus F11_RS13000 PF07196 Flagellin hook IN motif F11_RS13010 PF04542 Sigma-70 region 2 F11_RS13010 PF08281 Sigma-70, region 4 F11_RS13025 PF07690 Major Facilitator Superfamily F11_RS13035 PF06745 KaiC F11_RS13040 PF07689 KaiB domain F11_RS13045 PF13426 PAS domain F11_RS13045 PF07536 HWE histidine kinase F11_RS13045 PF08447 PAS fold F11_RS13055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS13055 PF00672 HAMP domain F11_RS13075 PF03632 Glycosyl hydrolase family 65 central catalytic domain F11_RS13075 PF03633 Glycosyl hydrolase family 65, C-terminal domain F11_RS13075 PF03636 Glycosyl hydrolase family 65, N-terminal domain F11_RS13075 PF02358 Trehalose-phosphatase F11_RS13080 PF02515 CoA-transferase family III F11_RS13095 PF08241 Methyltransferase domain F11_RS13100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS13100 PF00672 HAMP domain F11_RS13105 PF00990 Diguanylate cyclase, GGDEF domain F11_RS13105 PF05230 MASE2 domain F11_RS13110 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F11_RS13110 PF13378 Enolase C-terminal domain-like F11_RS13125 PF14403 Circularly permuted ATP-grasp type 2 F11_RS13125 PF04168 A predicted alpha-helical domain with a conserved ER motif. F11_RS13130 PF01841 Transglutaminase-like superfamily F11_RS13130 PF08379 Bacterial transglutaminase-like N-terminal region F11_RS13140 PF01584 CheW-like domain F11_RS13155 PF00872 Transposase, Mutator family F11_RS13165 PF00563 EAL domain F11_RS13165 PF05231 MASE1 F11_RS13165 PF08447 PAS fold F11_RS13165 PF08448 PAS fold F11_RS13165 PF13426 PAS domain F11_RS13165 PF00990 Diguanylate cyclase, GGDEF domain F11_RS13170 PF01521 Iron-sulphur cluster biosynthesis F11_RS13175 PF01883 Iron-sulfur cluster assembly protein F11_RS13180 PF00266 Aminotransferase class-V F11_RS13185 PF01458 Uncharacterized protein family (UPF0051) F11_RS13190 PF00005 ABC transporter F11_RS13195 PF01458 Uncharacterized protein family (UPF0051) F11_RS13200 PF02082 Transcriptional regulator F11_RS13210 PF00128 Alpha amylase, catalytic domain F11_RS13210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F11_RS13210 PF02806 Alpha amylase, C-terminal all-beta domain F11_RS13215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F11_RS13215 PF18390 Glycogen debranching enzyme C-terminal domain F11_RS13215 PF00128 Alpha amylase, catalytic domain F11_RS13285 PF04466 Phage terminase large subunit F11_RS13285 PF17288 Terminase RNAseH like domain F11_RS13300 PF00990 Diguanylate cyclase, GGDEF domain F11_RS13305 PF00990 Diguanylate cyclase, GGDEF domain F11_RS13320 PF03239 Iron permease FTR1 family F11_RS13325 PF13473 Cupredoxin-like domain F11_RS13325 PF09375 Imelysin F11_RS13330 PF04261 Dyp-type peroxidase family F11_RS13335 PF09375 Imelysin F11_RS13335 PF13473 Cupredoxin-like domain F11_RS13345 PF03707 Bacterial signalling protein N terminal repeat F11_RS13345 PF00990 Diguanylate cyclase, GGDEF domain F11_RS13345 PF00563 EAL domain F11_RS13350 PF00072 Response regulator receiver domain F11_RS13350 PF00196 Bacterial regulatory proteins, luxR family F11_RS13355 PF00563 EAL domain F11_RS13355 PF03707 Bacterial signalling protein N terminal repeat F11_RS13355 PF00990 Diguanylate cyclase, GGDEF domain F11_RS13360 PF13580 SIS domain F11_RS13365 PF00360 Phytochrome region F11_RS13365 PF00512 His Kinase A (phospho-acceptor) domain F11_RS13365 PF01590 GAF domain F11_RS13365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS13365 PF08446 PAS fold F11_RS13410 PF01381 Helix-turn-helix F11_RS13410 PF07883 Cupin domain F11_RS13415 PF01022 Bacterial regulatory protein, arsR family F11_RS13420 PF00850 Histone deacetylase domain F11_RS13425 PF02609 Exonuclease VII small subunit F11_RS13430 PF00348 Polyprenyl synthetase F11_RS13435 PF02780 Transketolase, C-terminal domain F11_RS13435 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F11_RS13435 PF02779 Transketolase, pyrimidine binding domain F11_RS13440 PF01728 FtsJ-like methyltransferase F11_RS13440 PF01479 S4 domain F11_RS13445 PF01343 Peptidase family S49 F11_RS13455 PF01264 Chorismate synthase F11_RS13465 PF03631 Virulence factor BrkB F11_RS13470 PF00684 DnaJ central domain F11_RS13470 PF00226 DnaJ domain F11_RS13470 PF01556 DnaJ C terminal domain F11_RS13475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F11_RS13475 PF01243 Pyridoxamine 5'-phosphate oxidase F11_RS13480 PF01545 Cation efflux family F11_RS13480 PF16916 Dimerisation domain of Zinc Transporter F11_RS13490 PF00480 ROK family F11_RS13495 PF01613 Flavin reductase like domain F11_RS13505 PF00005 ABC transporter F11_RS13580 PF01266 FAD dependent oxidoreductase F11_RS13595 PF00155 Aminotransferase class I and II F11_RS13610 PF00708 Acylphosphatase F11_RS13615 PF04279 Intracellular septation protein A F11_RS13630 PF13419 Haloacid dehalogenase-like hydrolase F11_RS13635 PF00849 RNA pseudouridylate synthase F11_RS13635 PF01479 S4 domain F11_RS13640 PF12002 MgsA AAA+ ATPase C terminal F11_RS13640 PF00004 ATPase family associated with various cellular activities (AAA) F11_RS13640 PF16193 AAA C-terminal domain F11_RS13645 PF03707 Bacterial signalling protein N terminal repeat F11_RS13645 PF00990 Diguanylate cyclase, GGDEF domain F11_RS13645 PF00563 EAL domain F11_RS13650 PF13180 PDZ domain F11_RS13655 PF01196 Ribosomal protein L17 F11_RS13660 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F11_RS13660 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F11_RS13660 PF01000 RNA polymerase Rpb3/RpoA insert domain F11_RS13665 PF00411 Ribosomal protein S11 F11_RS13670 PF00416 Ribosomal protein S13/S18 F11_RS13680 PF00344 SecY translocase F11_RS13685 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F11_RS13690 PF00327 Ribosomal protein L30p/L7e F11_RS13695 PF03719 Ribosomal protein S5, C-terminal domain F11_RS13695 PF00333 Ribosomal protein S5, N-terminal domain F11_RS13700 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F11_RS13705 PF00347 Ribosomal protein L6 F11_RS13710 PF00410 Ribosomal protein S8 F11_RS13715 PF00253 Ribosomal protein S14p/S29e F11_RS13720 PF00673 ribosomal L5P family C-terminus F11_RS13720 PF00281 Ribosomal protein L5 F11_RS13725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F11_RS13725 PF00467 KOW motif F11_RS13730 PF00238 Ribosomal protein L14p/L23e F11_RS13735 PF00366 Ribosomal protein S17 F11_RS13740 PF00831 Ribosomal L29 protein F11_RS13745 PF00252 Ribosomal protein L16p/L10e F11_RS13750 PF07650 KH domain F11_RS13750 PF00189 Ribosomal protein S3, C-terminal domain F11_RS13755 PF00237 Ribosomal protein L22p/L17e F11_RS13760 PF00203 Ribosomal protein S19 F11_RS13765 PF00181 Ribosomal Proteins L2, RNA binding domain F11_RS13765 PF03947 Ribosomal Proteins L2, C-terminal domain F11_RS13770 PF00276 Ribosomal protein L23 F11_RS13775 PF00573 Ribosomal protein L4/L1 family F11_RS13780 PF00297 Ribosomal protein L3 F11_RS13785 PF00338 Ribosomal protein S10p/S20e F11_RS13790 PF00009 Elongation factor Tu GTP binding domain F11_RS13790 PF03144 Elongation factor Tu domain 2 F11_RS13790 PF03143 Elongation factor Tu C-terminal domain F11_RS13795 PF03764 Elongation factor G, domain IV F11_RS13795 PF14492 Elongation Factor G, domain II F11_RS13795 PF00679 Elongation factor G C-terminus F11_RS13795 PF00009 Elongation factor Tu GTP binding domain F11_RS13795 PF03144 Elongation factor Tu domain 2 F11_RS13800 PF00177 Ribosomal protein S7p/S5e F11_RS13805 PF00164 Ribosomal protein S12/S23 F11_RS13810 PF00623 RNA polymerase Rpb1, domain 2 F11_RS13810 PF04997 RNA polymerase Rpb1, domain 1 F11_RS13810 PF04998 RNA polymerase Rpb1, domain 5 F11_RS13810 PF05000 RNA polymerase Rpb1, domain 4 F11_RS13810 PF04983 RNA polymerase Rpb1, domain 3 F11_RS13815 PF00562 RNA polymerase Rpb2, domain 6 F11_RS13815 PF10385 RNA polymerase beta subunit external 1 domain F11_RS13815 PF04560 RNA polymerase Rpb2, domain 7 F11_RS13815 PF04563 RNA polymerase beta subunit F11_RS13815 PF04561 RNA polymerase Rpb2, domain 2 F11_RS13815 PF04565 RNA polymerase Rpb2, domain 3 F11_RS13820 PF16320 Ribosomal protein L7/L12 dimerisation domain F11_RS13820 PF00542 Ribosomal protein L7/L12 C-terminal domain F11_RS13825 PF00466 Ribosomal protein L10 F11_RS13830 PF00687 Ribosomal protein L1p/L10e family F11_RS13835 PF00298 Ribosomal protein L11, RNA binding domain F11_RS13835 PF03946 Ribosomal protein L11, N-terminal domain F11_RS13840 PF02357 Transcription termination factor nusG F11_RS13840 PF00467 KOW motif F11_RS13845 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F11_RS13855 PF03143 Elongation factor Tu C-terminal domain F11_RS13855 PF03144 Elongation factor Tu domain 2 F11_RS13855 PF00009 Elongation factor Tu GTP binding domain F11_RS13870 PF00588 SpoU rRNA Methylase family F11_RS13870 PF08032 RNA 2'-O ribose methyltransferase substrate binding F11_RS13895 PF00561 alpha/beta hydrolase fold F11_RS13905 PF03061 Thioesterase superfamily F11_RS13910 PF00986 DNA gyrase B subunit, carboxyl terminus F11_RS13910 PF00204 DNA gyrase B F11_RS13910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS13910 PF01751 Toprim domain F11_RS13915 PF00583 Acetyltransferase (GNAT) family F11_RS13950 PF00271 Helicase conserved C-terminal domain F11_RS13950 PF00270 DEAD/DEAH box helicase F11_RS13955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F11_RS13955 PF00205 Thiamine pyrophosphate enzyme, central domain F11_RS13955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F11_RS13960 PF00037 4Fe-4S binding domain F11_RS13965 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II F11_RS13965 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg F11_RS13965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase F11_RS13970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F11_RS13980 PF00561 alpha/beta hydrolase fold F11_RS13985 PF13188 PAS domain F11_RS13985 PF00512 His Kinase A (phospho-acceptor) domain F11_RS13985 PF00072 Response regulator receiver domain F11_RS13985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS13985 PF08448 PAS fold F11_RS13990 PF00158 Sigma-54 interaction domain F11_RS13990 PF00072 Response regulator receiver domain F11_RS13990 PF02954 Bacterial regulatory protein, Fis family F11_RS14015 PF06055 Exopolysaccharide synthesis, ExoD F11_RS14030 PF04321 RmlD substrate binding domain F11_RS14045 PF00535 Glycosyl transferase family 2 F11_RS14060 PF02350 UDP-N-acetylglucosamine 2-epimerase F11_RS14065 PF02719 Polysaccharide biosynthesis protein F11_RS14080 PF08889 WbqC-like protein family F11_RS14090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F11_RS14100 PF00005 ABC transporter F11_RS14110 PF13533 Biotin-lipoyl like F11_RS14120 PF07568 Histidine kinase F11_RS14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS14120 PF12282 Signal transduction histidine kinase F11_RS14130 PF00313 'Cold-shock' DNA-binding domain F11_RS14145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS14145 PF00672 HAMP domain F11_RS14145 PF00672 HAMP domain F11_RS14145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS14150 PF00072 Response regulator receiver domain F11_RS14150 PF00486 Transcriptional regulatory protein, C terminal F11_RS14155 PF03063 Prismane/CO dehydrogenase family F11_RS14165 PF01757 Acyltransferase family F11_RS14180 PF00563 EAL domain F11_RS14180 PF00990 Diguanylate cyclase, GGDEF domain F11_RS14180 PF08448 PAS fold F11_RS14185 PF08443 RimK-like ATP-grasp domain F11_RS14185 PF18030 RimK PreATP-grasp domain F11_RS14195 PF03884 DNA gyrase inhibitor YacG F11_RS14200 PF10150 Ribonuclease E/G family F11_RS14200 PF00575 S1 RNA binding domain F11_RS14205 PF02545 Maf-like protein F11_RS14210 PF01451 Low molecular weight phosphotyrosine protein phosphatase F11_RS14215 PF06793 Uncharacterised protein family (UPF0262) F11_RS14220 PF00815 Histidinol dehydrogenase F11_RS14225 PF01634 ATP phosphoribosyltransferase F11_RS14235 PF02743 Cache domain F11_RS14235 PF00672 HAMP domain F11_RS14235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS14245 PF04752 ChaC-like protein F11_RS14250 PF00892 EamA-like transporter family F11_RS14260 PF01381 Helix-turn-helix F11_RS14265 PF09370 Phosphoenolpyruvate hydrolase-like F11_RS14275 PF03466 LysR substrate binding domain F11_RS14275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS14280 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) F11_RS14285 PF02608 ABC transporter substrate-binding protein PnrA-like F11_RS14290 PF00005 ABC transporter F11_RS14295 PF02653 Branched-chain amino acid transport system / permease component F11_RS14300 PF02653 Branched-chain amino acid transport system / permease component F11_RS14305 PF07969 Amidohydrolase family F11_RS14310 PF07690 Major Facilitator Superfamily F11_RS14320 PF00692 dUTPase F11_RS14325 PF02511 Thymidylate synthase complementing protein F11_RS14330 PF06224 Winged helix DNA-binding domain F11_RS14335 PF00692 dUTPase F11_RS14370 PF00578 AhpC/TSA family F11_RS14380 PF00578 AhpC/TSA family F11_RS14385 PF12704 MacB-like periplasmic core domain F11_RS14385 PF00005 ABC transporter F11_RS14385 PF02687 FtsX-like permease family F11_RS14395 PF02687 FtsX-like permease family F11_RS14395 PF12704 MacB-like periplasmic core domain F11_RS14405 PF10634 Fe2+ transport protein F11_RS14410 PF03239 Iron permease FTR1 family F11_RS14420 PF18693 TRAM domain F11_RS14420 PF00919 Uncharacterized protein family UPF0004 F11_RS14420 PF04055 Radical SAM superfamily F11_RS14425 PF12804 MobA-like NTP transferase domain F11_RS14430 PF01967 MoaC family F11_RS14435 PF02597 ThiS family F11_RS14440 PF02391 MoaE protein F11_RS14445 PF00440 Bacterial regulatory proteins, tetR family F11_RS14455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F11_RS14455 PF01411 tRNA synthetases class II (A) F11_RS14455 PF02272 DHHA1 domain F11_RS14460 PF00154 recA bacterial DNA recombination protein F11_RS14465 PF00072 Response regulator receiver domain F11_RS14465 PF13188 PAS domain F11_RS14465 PF08448 PAS fold F11_RS14465 PF00512 His Kinase A (phospho-acceptor) domain F11_RS14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS14470 PF01312 FlhB HrpN YscU SpaS Family F11_RS14475 PF01311 Bacterial export proteins, family 1 F11_RS14480 PF01313 Bacterial export proteins, family 3 F11_RS14485 PF02049 Flagellar hook-basal body complex protein FliE F11_RS14490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F11_RS14495 PF00460 Flagella basal body rod protein F11_RS14500 PF01312 FlhB HrpN YscU SpaS Family F11_RS14515 PF00813 FliP family F11_RS14530 PF13677 Membrane MotB of proton-channel complex MotA/MotB F11_RS14530 PF00691 OmpA family F11_RS14550 PF00072 Response regulator receiver domain F11_RS14565 PF02154 Flagellar motor switch protein FliM F11_RS14565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F11_RS14575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F11_RS14575 PF00460 Flagella basal body rod protein F11_RS14580 PF00460 Flagella basal body rod protein F11_RS14580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F11_RS14590 PF02107 Flagellar L-ring protein F11_RS14600 PF01258 Prokaryotic dksA/traR C4-type zinc finger F11_RS14605 PF10768 Class II flagellar assembly regulator F11_RS14610 PF02119 Flagellar P-ring protein F11_RS14645 PF07309 Flagellar protein FlaF F11_RS14650 PF07378 Flagellar protein FlbT F11_RS14660 PF18254 HMW1 domain 2 F11_RS14660 PF18071 HMW1C N-terminal F11_RS14675 PF00561 alpha/beta hydrolase fold F11_RS14680 PF00440 Bacterial regulatory proteins, tetR family F11_RS14700 PF02423 Ornithine cyclodeaminase/mu-crystallin family F11_RS14705 PF03707 Bacterial signalling protein N terminal repeat F11_RS14705 PF00990 Diguanylate cyclase, GGDEF domain F11_RS14705 PF00563 EAL domain F11_RS14715 PF03741 Integral membrane protein TerC family F11_RS14715 PF03471 Transporter associated domain F11_RS14720 PF07687 Peptidase dimerisation domain F11_RS14720 PF01546 Peptidase family M20/M25/M40 F11_RS14735 PF01266 FAD dependent oxidoreductase F11_RS14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS14740 PF03466 LysR substrate binding domain F11_RS14745 PF00248 Aldo/keto reductase family F11_RS14750 PF13291 ACT domain F11_RS14750 PF00291 Pyridoxal-phosphate dependent enzyme F11_RS14765 PF09924 Uncharacterised conserved protein (DUF2156) F11_RS14765 PF03706 Lysylphosphatidylglycerol synthase TM region F11_RS14780 PF04546 Sigma-70, non-essential region F11_RS14780 PF04542 Sigma-70 region 2 F11_RS14780 PF04539 Sigma-70 region 3 F11_RS14780 PF04545 Sigma-70, region 4 F11_RS14780 PF03979 Sigma-70 factor, region 1.1 F11_RS14780 PF00140 Sigma-70 factor, region 1.2 F11_RS14785 PF10410 DnaB-helicase binding domain of primase F11_RS14785 PF08275 DNA primase catalytic core, N-terminal domain F11_RS14785 PF01807 CHC2 zinc finger F11_RS14785 PF08278 DNA primase DnaG DnaB-binding F11_RS14795 PF00117 Glutamine amidotransferase class-I F11_RS14795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F11_RS14800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F11_RS14800 PF02142 MGS-like domain F11_RS14800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F11_RS14805 PF03449 Transcription elongation factor, N-terminal F11_RS14805 PF01272 Transcription elongation factor, GreA/GreB, C-term F11_RS14830 PF00950 ABC 3 transport family F11_RS14835 PF00950 ABC 3 transport family F11_RS14840 PF00005 ABC transporter F11_RS14845 PF01297 Zinc-uptake complex component A periplasmic F11_RS14850 PF01037 Lrp/AsnC ligand binding domain F11_RS14855 PF00578 AhpC/TSA family F11_RS14855 PF10417 C-terminal domain of 1-Cys peroxiredoxin F11_RS14860 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS14865 PF03466 LysR substrate binding domain F11_RS14885 PF03441 FAD binding domain of DNA photolyase F11_RS14885 PF00875 DNA photolyase F11_RS14895 PF00872 Transposase, Mutator family F11_RS14905 PF01037 Lrp/AsnC ligand binding domain F11_RS14915 PF02405 Permease MlaE F11_RS14920 PF00005 ABC transporter F11_RS14940 PF00486 Transcriptional regulatory protein, C terminal F11_RS14940 PF00072 Response regulator receiver domain F11_RS14945 PF13426 PAS domain F11_RS14945 PF00512 His Kinase A (phospho-acceptor) domain F11_RS14945 PF08448 PAS fold F11_RS14945 PF00072 Response regulator receiver domain F11_RS14945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS14955 PF01648 4'-phosphopantetheinyl transferase superfamily F11_RS14995 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 F11_RS14995 PF00535 Glycosyl transferase family 2 F11_RS15000 PF07690 Major Facilitator Superfamily F11_RS15005 PF02321 Outer membrane efflux protein F11_RS15010 PF00873 AcrB/AcrD/AcrF family F11_RS15020 PF00486 Transcriptional regulatory protein, C terminal F11_RS15020 PF00072 Response regulator receiver domain F11_RS15025 PF00512 His Kinase A (phospho-acceptor) domain F11_RS15025 PF16736 Single Cache-like F11_RS15025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS15025 PF00989 PAS fold F11_RS15030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F11_RS15065 PF00512 His Kinase A (phospho-acceptor) domain F11_RS15065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS15070 PF01979 Amidohydrolase family F11_RS15075 PF13537 Glutamine amidotransferase domain F11_RS15075 PF00733 Asparagine synthase F11_RS15080 PF13439 Glycosyltransferase Family 4 F11_RS15080 PF00534 Glycosyl transferases group 1 F11_RS15085 PF00534 Glycosyl transferases group 1 F11_RS15085 PF13439 Glycosyltransferase Family 4 F11_RS15090 PF01571 Aminomethyltransferase folate-binding domain F11_RS15100 PF00005 ABC transporter F11_RS15100 PF00664 ABC transporter transmembrane region F11_RS15105 PF03739 Lipopolysaccharide export system permease LptF/LptG F11_RS15120 PF08676 MutL C terminal dimerisation domain F11_RS15120 PF01119 DNA mismatch repair protein, C-terminal domain F11_RS15125 PF00342 Phosphoglucose isomerase F11_RS15145 PF00348 Polyprenyl synthetase F11_RS15155 PF05175 Methyltransferase small domain F11_RS15165 PF02091 Glycyl-tRNA synthetase alpha subunit F11_RS15170 PF05746 DALR anticodon binding domain F11_RS15170 PF02092 Glycyl-tRNA synthetase beta subunit F11_RS15175 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F11_RS15175 PF02896 PEP-utilising enzyme, TIM barrel domain F11_RS15175 PF00391 PEP-utilising enzyme, mobile domain F11_RS15185 PF07690 Major Facilitator Superfamily F11_RS15195 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS15195 PF00107 Zinc-binding dehydrogenase F11_RS15205 PF01575 MaoC like domain F11_RS15210 PF06574 FAD synthetase F11_RS15210 PF01687 Riboflavin kinase F11_RS15215 PF08264 Anticodon-binding domain of tRNA F11_RS15215 PF00133 tRNA synthetases class I (I, L, M and V) F11_RS15220 PF01252 Signal peptidase (SPase) II F11_RS15230 PF01411 tRNA synthetases class II (A) F11_RS15230 PF02272 DHHA1 domain F11_RS15230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F11_RS15235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F11_RS15240 PF07690 Major Facilitator Superfamily F11_RS15245 PF05193 Peptidase M16 inactive domain F11_RS15245 PF00675 Insulinase (Peptidase family M16) F11_RS15250 PF05193 Peptidase M16 inactive domain F11_RS15255 PF00124 Photosynthetic reaction centre protein F11_RS15260 PF00124 Photosynthetic reaction centre protein F11_RS15265 PF00556 Antenna complex alpha/beta subunit F11_RS15270 PF00556 Antenna complex alpha/beta subunit F11_RS15275 PF08369 Proto-chlorophyllide reductase 57 kD subunit F11_RS15275 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS15280 PF00148 Nitrogenase component 1 type Oxidoreductase F11_RS15285 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family F11_RS15295 PF16864 Dimerisation domain F11_RS15295 PF00891 O-methyltransferase domain F11_RS15300 PF00348 Polyprenyl synthetase F11_RS15305 PF01593 Flavin containing amine oxidoreductase F11_RS15315 PF00890 FAD binding domain F11_RS15315 PF14537 Cytochrome c3 F11_RS15325 PF02571 Precorrin-6x reductase CbiJ/CobK F11_RS15330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F11_RS15335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F11_RS15340 PF02570 Precorrin-8X methylmutase F11_RS15345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F11_RS15355 PF10609 NUBPL iron-transfer P-loop NTPase F11_RS15365 PF01888 CbiD F11_RS15370 PF07085 DRTGG domain F11_RS15370 PF01515 Phosphate acetyl/butaryl transferase F11_RS15375 PF00871 Acetokinase family F11_RS15380 PF04055 Radical SAM superfamily F11_RS15385 PF01228 Glycine radical F11_RS15385 PF02901 Pyruvate formate lyase-like F11_RS15390 PF13722 5TM C-terminal transporter carbon starvation CstA F11_RS15390 PF02554 Carbon starvation protein CstA F11_RS15395 PF00857 Isochorismatase family F11_RS15405 PF00155 Aminotransferase class I and II F11_RS15410 PF00301 Rubredoxin F11_RS15430 PF00202 Aminotransferase class-III F11_RS15435 PF08220 DeoR-like helix-turn-helix domain F11_RS15435 PF00455 DeoR C terminal sensor domain F11_RS15440 PF00857 Isochorismatase family F11_RS15450 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS15455 PF08402 TOBE domain F11_RS15455 PF00005 ABC transporter F11_RS15530 PF01380 SIS domain F11_RS15535 PF12804 MobA-like NTP transferase domain F11_RS15535 PF00132 Bacterial transferase hexapeptide (six repeats) F11_RS15540 PF13419 Haloacid dehalogenase-like hydrolase F11_RS15570 PF04851 Type III restriction enzyme, res subunit F11_RS15570 PF13307 Helicase C-terminal domain F11_RS15570 PF00929 Exonuclease F11_RS15575 PF00672 HAMP domain F11_RS15575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS15575 PF17200 Single Cache domain 2 F11_RS15585 PF00512 His Kinase A (phospho-acceptor) domain F11_RS15585 PF08448 PAS fold F11_RS15585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS15585 PF00072 Response regulator receiver domain F11_RS15585 PF13188 PAS domain F11_RS15595 PF00155 Aminotransferase class I and II F11_RS15595 PF00392 Bacterial regulatory proteins, gntR family F11_RS15615 PF09347 Domain of unknown function (DUF1989) F11_RS15630 PF00266 Aminotransferase class-V F11_RS15635 PF02347 Glycine cleavage system P-protein F11_RS15640 PF01597 Glycine cleavage H-protein F11_RS15645 PF01571 Aminomethyltransferase folate-binding domain F11_RS15645 PF08669 Glycine cleavage T-protein C-terminal barrel domain F11_RS15655 PF01636 Phosphotransferase enzyme family F11_RS15660 PF00075 RNase H F11_RS15665 PF00892 EamA-like transporter family F11_RS15670 PF07690 Major Facilitator Superfamily F11_RS15675 PF08534 Redoxin F11_RS15675 PF00462 Glutaredoxin F11_RS15680 PF11412 Disulphide bond corrector protein DsbC F11_RS15680 PF02683 Cytochrome C biogenesis protein transmembrane region F11_RS15685 PF02622 Uncharacterized ACR, COG1678 F11_RS15700 PF01642 Methylmalonyl-CoA mutase F11_RS15700 PF02310 B12 binding domain F11_RS15705 PF00107 Zinc-binding dehydrogenase F11_RS15705 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS15710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F11_RS15710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F11_RS15710 PF02770 Acyl-CoA dehydrogenase, middle domain F11_RS15720 PF02525 Flavodoxin-like fold F11_RS15725 PF00440 Bacterial regulatory proteins, tetR family F11_RS15725 PF13977 BetI-type transcriptional repressor, C-terminal F11_RS15730 PF01381 Helix-turn-helix F11_RS15740 PF01037 Lrp/AsnC ligand binding domain F11_RS15750 PF00924 Mechanosensitive ion channel F11_RS15760 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase F11_RS15775 PF01012 Electron transfer flavoprotein domain F11_RS15780 PF00766 Electron transfer flavoprotein FAD-binding domain F11_RS15780 PF01012 Electron transfer flavoprotein domain F11_RS15785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F11_RS15785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F11_RS15795 PF05973 Phage derived protein Gp49-like (DUF891) F11_RS15800 PF01381 Helix-turn-helix F11_RS15805 PF03358 NADPH-dependent FMN reductase F11_RS15810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F11_RS15810 PF01926 50S ribosome-binding GTPase F11_RS15840 PF00535 Glycosyl transferase family 2 F11_RS15875 PF13439 Glycosyltransferase Family 4 F11_RS15875 PF00534 Glycosyl transferases group 1 F11_RS15905 PF02397 Bacterial sugar transferase F11_RS15910 PF00989 PAS fold F11_RS15910 PF01627 Hpt domain F11_RS15910 PF18415 Histidine kinase receptor ArcB trans-membrane domain F11_RS15910 PF00512 His Kinase A (phospho-acceptor) domain F11_RS15910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS15910 PF00072 Response regulator receiver domain F11_RS15915 PF02954 Bacterial regulatory protein, Fis family F11_RS15915 PF00158 Sigma-54 interaction domain F11_RS15915 PF00072 Response regulator receiver domain F11_RS15935 PF01370 NAD dependent epimerase/dehydratase family F11_RS15940 PF13193 AMP-binding enzyme C-terminal domain F11_RS15940 PF00501 AMP-binding enzyme F11_RS15940 PF00975 Thioesterase domain F11_RS15940 PF00550 Phosphopantetheine attachment site F11_RS15940 PF00668 Condensation domain F11_RS15945 PF01734 Patatin-like phospholipase F11_RS15950 PF00149 Calcineurin-like phosphoesterase F11_RS15965 PF01522 Polysaccharide deacetylase F11_RS15970 PF13401 AAA domain F11_RS15970 PF01471 Putative peptidoglycan binding domain F11_RS15980 PF10531 SLBB domain F11_RS15980 PF02563 Polysaccharide biosynthesis/export protein F11_RS15980 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F11_RS15990 PF13614 AAA domain F11_RS16000 PF13537 Glutamine amidotransferase domain F11_RS16000 PF00733 Asparagine synthase F11_RS16005 PF00550 Phosphopantetheine attachment site F11_RS16020 PF00534 Glycosyl transferases group 1 F11_RS16020 PF13439 Glycosyltransferase Family 4 F11_RS16045 PF00005 ABC transporter F11_RS16055 PF08448 PAS fold F11_RS16055 PF00990 Diguanylate cyclase, GGDEF domain F11_RS16065 PF00550 Phosphopantetheine attachment site F11_RS16065 PF00501 AMP-binding enzyme F11_RS16065 PF13193 AMP-binding enzyme C-terminal domain F11_RS16065 PF00668 Condensation domain F11_RS16070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F11_RS16070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F11_RS16075 PF13614 AAA domain F11_RS16080 PF03707 Bacterial signalling protein N terminal repeat F11_RS16080 PF00990 Diguanylate cyclase, GGDEF domain F11_RS16080 PF00563 EAL domain F11_RS16095 PF02447 GntP family permease F11_RS16105 PF17042 Nucleotide-binding C-terminal domain F11_RS16105 PF07005 Sugar-binding N-terminal domain F11_RS16110 PF00596 Class II Aldolase and Adducin N-terminal domain F11_RS16125 PF04349 Periplasmic glucan biosynthesis protein, MdoG F11_RS16140 PF03781 Sulfatase-modifying factor enzyme 1 F11_RS16150 PF00005 ABC transporter F11_RS16180 PF00092 von Willebrand factor type A domain F11_RS16195 PF00083 Sugar (and other) transporter F11_RS16195 PF07690 Major Facilitator Superfamily F11_RS16200 PF00892 EamA-like transporter family F11_RS16210 PF01817 Chorismate mutase type II F11_RS16210 PF00800 Prephenate dehydratase F11_RS16215 PF02348 Cytidylyltransferase F11_RS16225 PF00459 Inositol monophosphatase family F11_RS16230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F11_RS16235 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS16240 PF12911 N-terminal TM domain of oligopeptide transport permease C F11_RS16240 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS16245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F11_RS16245 PF00005 ABC transporter F11_RS16250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F11_RS16260 PF01810 LysE type translocator F11_RS16275 PF02637 GatB domain F11_RS16275 PF02934 GatB/GatE catalytic domain F11_RS16280 PF01425 Amidase F11_RS16285 PF02686 Glu-tRNAGln amidotransferase C subunit F11_RS16290 PF03652 Holliday junction resolvase F11_RS16295 PF13302 Acetyltransferase (GNAT) domain F11_RS16300 PF01966 HD domain F11_RS16300 PF00672 HAMP domain F11_RS16335 PF00486 Transcriptional regulatory protein, C terminal F11_RS16335 PF00072 Response regulator receiver domain F11_RS16340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS16350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F11_RS16350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F11_RS16355 PF01979 Amidohydrolase family F11_RS16360 PF02660 Glycerol-3-phosphate acyltransferase F11_RS16365 PF13417 Glutathione S-transferase, N-terminal domain F11_RS16365 PF00043 Glutathione S-transferase, C-terminal domain F11_RS16370 PF02481 DNA recombination-mediator protein A F11_RS16370 PF17782 DprA winged helix domain F11_RS16400 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS16405 PF00005 ABC transporter F11_RS16405 PF08402 TOBE domain F11_RS16410 PF13368 Topoisomerase C-terminal repeat F11_RS16410 PF01131 DNA topoisomerase F11_RS16410 PF01751 Toprim domain F11_RS16410 PF01396 Topoisomerase DNA binding C4 zinc finger F11_RS16415 PF00575 S1 RNA binding domain F11_RS16415 PF00773 RNB domain F11_RS16415 PF08206 Ribonuclease B OB domain F11_RS16415 PF08461 Ribonuclease R winged-helix domain F11_RS16415 PF17876 Cold shock domain F11_RS16420 PF03572 Peptidase family S41 F11_RS16420 PF13180 PDZ domain F11_RS16425 PF00471 Ribosomal protein L33 F11_RS16430 PF00072 Response regulator receiver domain F11_RS16445 PF01351 Ribonuclease HII F11_RS16450 PF01555 DNA methylase F11_RS16450 PF18755 Restriction Enzyme Adenine Methylase Associated F11_RS16455 PF01814 Hemerythrin HHE cation binding domain F11_RS16465 PF00512 His Kinase A (phospho-acceptor) domain F11_RS16465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS16465 PF00989 PAS fold F11_RS16470 PF01053 Cys/Met metabolism PLP-dependent enzyme F11_RS16500 PF00593 TonB dependent receptor F11_RS16500 PF07715 TonB-dependent Receptor Plug Domain F11_RS16510 PF01032 FecCD transport family F11_RS16515 PF00005 ABC transporter F11_RS16545 PF03364 Polyketide cyclase / dehydrase and lipid transport F11_RS16550 PF00072 Response regulator receiver domain F11_RS16550 PF00196 Bacterial regulatory proteins, luxR family F11_RS16565 PF02074 Carboxypeptidase Taq (M32) metallopeptidase F11_RS16570 PF14821 Threonine synthase N terminus F11_RS16570 PF00291 Pyridoxal-phosphate dependent enzyme F11_RS16575 PF00675 Insulinase (Peptidase family M16) F11_RS16575 PF05193 Peptidase M16 inactive domain F11_RS16580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F11_RS16585 PF00005 ABC transporter F11_RS16585 PF12704 MacB-like periplasmic core domain F11_RS16585 PF02687 FtsX-like permease family F11_RS16590 PF02321 Outer membrane efflux protein F11_RS16610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS16615 PF01381 Helix-turn-helix F11_RS16620 PF00430 ATP synthase B/B' CF(0) F11_RS16625 PF00430 ATP synthase B/B' CF(0) F11_RS16630 PF00137 ATP synthase subunit C F11_RS16635 PF00119 ATP synthase A chain F11_RS16640 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter F11_RS16645 PF02463 RecF/RecN/SMC N terminal domain F11_RS16650 PF13462 Thioredoxin F11_RS16660 PF00633 Helix-hairpin-helix motif F11_RS16660 PF14815 NUDIX domain F11_RS16660 PF00730 HhH-GPD superfamily base excision DNA repair protein F11_RS16660 PF10576 Iron-sulfur binding domain of endonuclease III F11_RS16665 PF01370 NAD dependent epimerase/dehydratase family F11_RS16675 PF00005 ABC transporter F11_RS16695 PF00317 Ribonucleotide reductase, all-alpha domain F11_RS16695 PF03477 ATP cone domain F11_RS16695 PF02867 Ribonucleotide reductase, barrel domain F11_RS16700 PF04752 ChaC-like protein F11_RS16720 PF02153 Prephenate dehydrogenase F11_RS16725 PF00155 Aminotransferase class I and II F11_RS16735 PF00561 alpha/beta hydrolase fold F11_RS16740 PF00561 alpha/beta hydrolase fold F11_RS16740 PF07021 Methionine biosynthesis protein MetW F11_RS16755 PF00753 Metallo-beta-lactamase superfamily F11_RS16755 PF16123 Hydroxyacylglutathione hydrolase C-terminus F11_RS16780 PF01430 Hsp33 protein F11_RS16785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F11_RS16785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F11_RS16790 PF00202 Aminotransferase class-III F11_RS16795 PF01370 NAD dependent epimerase/dehydratase family F11_RS16810 PF14748 Pyrroline-5-carboxylate reductase dimerisation F11_RS16810 PF03807 NADP oxidoreductase coenzyme F420-dependent F11_RS16825 PF01588 Putative tRNA binding domain F11_RS16830 PF00072 Response regulator receiver domain F11_RS16840 PF08281 Sigma-70, region 4 F11_RS16840 PF04542 Sigma-70 region 2 F11_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS16845 PF12282 Signal transduction histidine kinase F11_RS16845 PF07568 Histidine kinase F11_RS16850 PF00781 Diacylglycerol kinase catalytic domain F11_RS16855 PF00149 Calcineurin-like phosphoesterase F11_RS16875 PF07689 KaiB domain F11_RS16880 PF06745 KaiC F11_RS16885 PF01590 GAF domain F11_RS16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS16885 PF00512 His Kinase A (phospho-acceptor) domain F11_RS16885 PF08446 PAS fold F11_RS16885 PF00360 Phytochrome region F11_RS16900 PF14310 Fibronectin type III-like domain F11_RS16900 PF00933 Glycosyl hydrolase family 3 N terminal domain F11_RS16900 PF01915 Glycosyl hydrolase family 3 C-terminal domain F11_RS16905 PF06472 ABC transporter transmembrane region 2 F11_RS16905 PF00005 ABC transporter F11_RS16925 PF12399 Branched-chain amino acid ATP-binding cassette transporter F11_RS16925 PF00005 ABC transporter F11_RS16930 PF00005 ABC transporter F11_RS16935 PF02653 Branched-chain amino acid transport system / permease component F11_RS16985 PF01381 Helix-turn-helix F11_RS17010 PF10549 ORF11CD3 domain F11_RS17010 PF09669 Phage regulatory protein Rha (Phage_pRha) F11_RS17035 PF00156 Phosphoribosyl transferase domain F11_RS17040 PF02569 Pantoate-beta-alanine ligase F11_RS17045 PF02548 Ketopantoate hydroxymethyltransferase F11_RS17050 PF00027 Cyclic nucleotide-binding domain F11_RS17050 PF13545 Crp-like helix-turn-helix domain F11_RS17055 PF03597 Cytochrome oxidase maturation protein cbb3-type F11_RS17070 PF13746 4Fe-4S dicluster domain F11_RS17070 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase F11_RS17070 PF12801 4Fe-4S binding domain F11_RS17085 PF04055 Radical SAM superfamily F11_RS17090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F11_RS17090 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP F11_RS17105 PF00115 Cytochrome C and Quinol oxidase polypeptide I F11_RS17110 PF10672 S-adenosylmethionine-dependent methyltransferase F11_RS17110 PF17785 PUA-like domain F11_RS17115 PF05145 Transition state regulatory protein AbrB F11_RS17120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS17120 PF00512 His Kinase A (phospho-acceptor) domain F11_RS17120 PF00672 HAMP domain F11_RS17125 PF00468 Ribosomal protein L34 F11_RS17130 PF00825 Ribonuclease P F11_RS17135 PF01809 Putative membrane protein insertion efficiency factor F11_RS17140 PF14849 YidC periplasmic domain F11_RS17140 PF02096 60Kd inner membrane protein F11_RS17145 PF01926 50S ribosome-binding GTPase F11_RS17150 PF00696 Amino acid kinase family F11_RS17155 PF00701 Dihydrodipicolinate synthetase family F11_RS17185 PF00534 Glycosyl transferases group 1 F11_RS17185 PF13439 Glycosyltransferase Family 4 F11_RS17190 PF02646 RmuC family F11_RS17200 PF01327 Polypeptide deformylase F11_RS17205 PF02911 Formyl transferase, C-terminal domain F11_RS17205 PF00551 Formyl transferase F11_RS17210 PF01416 tRNA pseudouridine synthase F11_RS17215 PF00893 Small Multidrug Resistance protein F11_RS17225 PF03692 Putative zinc- or iron-chelating domain F11_RS17235 PF02805 Metal binding domain of Ada F11_RS17235 PF12833 Helix-turn-helix domain F11_RS17235 PF00730 HhH-GPD superfamily base excision DNA repair protein F11_RS17235 PF06029 AlkA N-terminal domain F11_RS17240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F11_RS17240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F11_RS17245 PF07685 CobB/CobQ-like glutamine amidotransferase domain F11_RS17245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F11_RS17250 PF02630 SCO1/SenC F11_RS17260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F11_RS17265 PF08446 PAS fold F11_RS17265 PF00360 Phytochrome region F11_RS17265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS17265 PF01590 GAF domain F11_RS17265 PF00512 His Kinase A (phospho-acceptor) domain F11_RS17275 PF06421 GTP-binding protein LepA C-terminus F11_RS17275 PF00679 Elongation factor G C-terminus F11_RS17275 PF00009 Elongation factor Tu GTP binding domain F11_RS17280 PF02514 CobN/Magnesium Chelatase F11_RS17285 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F11_RS17290 PF03466 LysR substrate binding domain F11_RS17290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS17305 PF00107 Zinc-binding dehydrogenase F11_RS17305 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS17320 PF00990 Diguanylate cyclase, GGDEF domain F11_RS17320 PF00072 Response regulator receiver domain F11_RS17355 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F11_RS17355 PF07685 CobB/CobQ-like glutamine amidotransferase domain F11_RS17360 PF03186 CobD/Cbib protein F11_RS17365 PF01890 Cobalamin synthesis G C-terminus F11_RS17365 PF11761 Cobalamin biosynthesis central region F11_RS17365 PF11760 Cobalamin synthesis G N-terminal F11_RS17370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F11_RS17375 PF05736 OprF membrane domain F11_RS17375 PF00691 OmpA family F11_RS17380 PF02632 BioY family F11_RS17385 PF00108 Thiolase, N-terminal domain F11_RS17385 PF02803 Thiolase, C-terminal domain F11_RS17395 PF14403 Circularly permuted ATP-grasp type 2 F11_RS17395 PF04168 A predicted alpha-helical domain with a conserved ER motif. F11_RS17400 PF14403 Circularly permuted ATP-grasp type 2 F11_RS17405 PF00990 Diguanylate cyclase, GGDEF domain F11_RS17405 PF17151 Periplasmic sensor domain F11_RS17415 PF00905 Penicillin binding protein transpeptidase domain F11_RS17415 PF00912 Transglycosylase F11_RS17425 PF00196 Bacterial regulatory proteins, luxR family F11_RS17425 PF03472 Autoinducer binding domain F11_RS17430 PF00765 Autoinducer synthase F11_RS17440 PF01381 Helix-turn-helix F11_RS17445 PF02082 Transcriptional regulator F11_RS17455 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS17460 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS17465 PF12857 TOBE-like domain F11_RS17465 PF00005 ABC transporter F11_RS17470 PF02080 TrkA-C domain F11_RS17470 PF03600 Citrate transporter F11_RS17475 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS17475 PF00107 Zinc-binding dehydrogenase F11_RS17480 PF00756 Putative esterase F11_RS17485 PF00365 Phosphofructokinase F11_RS17490 PF00535 Glycosyl transferase family 2 F11_RS17490 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 F11_RS17500 PF05973 Phage derived protein Gp49-like (DUF891) F11_RS17510 PF01979 Amidohydrolase family F11_RS17510 PF13382 Adenine deaminase C-terminal domain F11_RS17515 PF00005 ABC transporter F11_RS17520 PF00005 ABC transporter F11_RS17525 PF02653 Branched-chain amino acid transport system / permease component F11_RS17525 PF11862 Domain of unknown function (DUF3382) F11_RS17535 PF13458 Periplasmic binding protein F11_RS17545 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain F11_RS17545 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain F11_RS17560 PF00072 Response regulator receiver domain F11_RS17560 PF00486 Transcriptional regulatory protein, C terminal F11_RS17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS17565 PF13756 Stimulus-sensing domain F11_RS17565 PF00672 HAMP domain F11_RS17565 PF00512 His Kinase A (phospho-acceptor) domain F11_RS17565 PF13755 Sensor N-terminal transmembrane domain F11_RS17570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F11_RS17575 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F11_RS17585 PF00291 Pyridoxal-phosphate dependent enzyme F11_RS17590 PF00290 Tryptophan synthase alpha chain F11_RS17600 PF17848 Acetyl-coA carboxylase zinc finger domain F11_RS17600 PF01039 Carboxyl transferase domain F11_RS17605 PF08245 Mur ligase middle domain F11_RS17605 PF02875 Mur ligase family, glutamate ligase domain F11_RS17615 PF00085 Thioredoxin F11_RS17620 PF12705 PD-(D/E)XK nuclease superfamily F11_RS17620 PF13361 UvrD-like helicase C-terminal domain F11_RS17620 PF00580 UvrD/REP helicase N-terminal domain F11_RS17625 PF12705 PD-(D/E)XK nuclease superfamily F11_RS17630 PF12804 MobA-like NTP transferase domain F11_RS17635 PF01636 Phosphotransferase enzyme family F11_RS17640 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F11_RS17645 PF07992 Pyridine nucleotide-disulphide oxidoreductase F11_RS17655 PF03551 Transcriptional regulator PadR-like family F11_RS17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS17665 PF00512 His Kinase A (phospho-acceptor) domain F11_RS17670 PF05221 S-adenosyl-L-homocysteine hydrolase F11_RS17670 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F11_RS17675 PF00391 PEP-utilising enzyme, mobile domain F11_RS17675 PF05524 PEP-utilising enzyme, N-terminal F11_RS17675 PF02896 PEP-utilising enzyme, TIM barrel domain F11_RS17680 PF00381 PTS HPr component phosphorylation site F11_RS17685 PF03610 PTS system fructose IIA component F11_RS17685 PF03830 PTS system sorbose subfamily IIB component F11_RS17690 PF03668 P-loop ATPase protein family F11_RS17695 PF02603 HPr Serine kinase N terminus F11_RS17695 PF07475 HPr Serine kinase C-terminal domain F11_RS17715 PF00005 ABC transporter F11_RS17720 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS17725 PF00528 Binding-protein-dependent transport system inner membrane component F11_RS17755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F11_RS17755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F11_RS17760 PF00313 'Cold-shock' DNA-binding domain F11_RS17775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS17780 PF00202 Aminotransferase class-III F11_RS17805 PF02132 RecR protein F11_RS17805 PF13662 Toprim domain F11_RS17810 PF02575 YbaB/EbfC DNA-binding family F11_RS17815 PF12170 DNA polymerase III tau subunit V interacting with alpha F11_RS17815 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding F11_RS17815 PF12169 DNA polymerase III subunits gamma and tau domain III F11_RS17820 PF00210 Ferritin-like domain F11_RS17825 PF02657 Fe-S metabolism associated domain F11_RS17830 PF03466 LysR substrate binding domain F11_RS17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F11_RS17835 PF07690 Major Facilitator Superfamily F11_RS17840 PF00563 EAL domain F11_RS17840 PF00990 Diguanylate cyclase, GGDEF domain F11_RS17840 PF13426 PAS domain F11_RS17845 PF14602 Hexapeptide repeat of succinyl-transferase F11_RS17845 PF00132 Bacterial transferase hexapeptide (six repeats) F11_RS17845 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal F11_RS17850 PF07687 Peptidase dimerisation domain F11_RS17850 PF01546 Peptidase family M20/M25/M40 F11_RS17860 PF01047 MarR family F11_RS17870 PF13533 Biotin-lipoyl like F11_RS17885 PF03129 Anticodon binding domain F11_RS17885 PF02824 TGS domain F11_RS17885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F11_RS17885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F11_RS17890 PF05198 Translation initiation factor IF-3, N-terminal domain F11_RS17890 PF00707 Translation initiation factor IF-3, C-terminal domain F11_RS17900 PF00149 Calcineurin-like phosphoesterase F11_RS17910 PF00672 HAMP domain F11_RS17910 PF00072 Response regulator receiver domain F11_RS17910 PF01627 Hpt domain F11_RS17910 PF00512 His Kinase A (phospho-acceptor) domain F11_RS17910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS17910 PF17149 Periplasmic sensor domain found in signal transduction proteins F11_RS17920 PF03707 Bacterial signalling protein N terminal repeat F11_RS17920 PF00563 EAL domain F11_RS17920 PF00990 Diguanylate cyclase, GGDEF domain F11_RS17935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS17935 PF16591 Helical bimodular sensor domain F11_RS17935 PF00672 HAMP domain F11_RS17945 PF03232 Ubiquinone biosynthesis protein COQ7 F11_RS17955 PF01891 Cobalt uptake substrate-specific transmembrane region F11_RS17980 PF00005 ABC transporter F11_RS17990 PF02653 Branched-chain amino acid transport system / permease component F11_RS17990 PF11862 Domain of unknown function (DUF3382) F11_RS17995 PF02653 Branched-chain amino acid transport system / permease component F11_RS18000 PF00501 AMP-binding enzyme F11_RS18005 PF00005 ABC transporter F11_RS18005 PF12399 Branched-chain amino acid ATP-binding cassette transporter F11_RS18010 PF00694 Aconitase C-terminal domain F11_RS18010 PF00330 Aconitase family (aconitate hydratase) F11_RS18015 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F11_RS18015 PF00117 Glutamine amidotransferase class-I F11_RS18020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS18025 PF01367 5'-3' exonuclease, C-terminal SAM fold F11_RS18025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F11_RS18025 PF00476 DNA polymerase family A F11_RS18025 PF01612 3'-5' exonuclease F11_RS18030 PF04397 LytTr DNA-binding domain F11_RS18045 PF08546 Ketopantoate reductase PanE/ApbA C terminal F11_RS18045 PF02558 Ketopantoate reductase PanE/ApbA F11_RS18055 PF01594 AI-2E family transporter F11_RS18060 PF01632 Ribosomal protein L35 F11_RS18065 PF00453 Ribosomal protein L20 F11_RS18070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F11_RS18070 PF01409 tRNA synthetases class II core domain (F) F11_RS18075 PF01588 Putative tRNA binding domain F11_RS18075 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F11_RS18075 PF03147 Ferredoxin-fold anticodon binding domain F11_RS18075 PF03484 tRNA synthetase B5 domain F11_RS18075 PF03483 B3/4 domain F11_RS18085 PF02594 Uncharacterised ACR, YggU family COG1872 F11_RS18090 PF02325 YGGT family F11_RS18105 PF02653 Branched-chain amino acid transport system / permease component F11_RS18110 PF11799 impB/mucB/samB family C-terminal domain F11_RS18110 PF00817 impB/mucB/samB family F11_RS18115 PF01106 NifU-like domain F11_RS18135 PF00579 tRNA synthetases class I (W and Y) F11_RS18140 PF00881 Nitroreductase family F11_RS18145 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH F11_RS18150 PF03023 Lipid II flippase MurJ F11_RS18155 PF01966 HD domain F11_RS18155 PF08335 GlnD PII-uridylyltransferase F11_RS18155 PF01909 Nucleotidyltransferase domain F11_RS18165 PF05190 MutS family domain IV F11_RS18165 PF05188 MutS domain II F11_RS18165 PF01624 MutS domain I F11_RS18165 PF00488 MutS domain V F11_RS18165 PF05192 MutS domain III F11_RS18170 PF01515 Phosphate acetyl/butaryl transferase F11_RS18170 PF03949 Malic enzyme, NAD binding domain F11_RS18170 PF00390 Malic enzyme, N-terminal domain F11_RS18175 PF16736 Single Cache-like F11_RS18175 PF00989 PAS fold F11_RS18175 PF00512 His Kinase A (phospho-acceptor) domain F11_RS18175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS18180 PF01895 PhoU domain F11_RS18185 PF00999 Sodium/hydrogen exchanger family F11_RS18190 PF00425 chorismate binding enzyme F11_RS18190 PF00117 Glutamine amidotransferase class-I F11_RS18190 PF04715 Anthranilate synthase component I, N terminal region F11_RS18200 PF02310 B12 binding domain F11_RS18200 PF04055 Radical SAM superfamily F11_RS18205 PF07685 CobB/CobQ-like glutamine amidotransferase domain F11_RS18210 PF07685 CobB/CobQ-like glutamine amidotransferase domain F11_RS18215 PF00248 Aldo/keto reductase family F11_RS18230 PF00684 DnaJ central domain F11_RS18230 PF01556 DnaJ C terminal domain F11_RS18230 PF00226 DnaJ domain F11_RS18235 PF00012 Hsp70 protein F11_RS18250 PF01027 Inhibitor of apoptosis-promoting Bax1 F11_RS18260 PF00990 Diguanylate cyclase, GGDEF domain F11_RS18260 PF00563 EAL domain F11_RS18260 PF03707 Bacterial signalling protein N terminal repeat F11_RS18265 PF00005 ABC transporter F11_RS18265 PF00664 ABC transporter transmembrane region F11_RS18275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS18275 PF00672 HAMP domain F11_RS18305 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F11_RS18305 PF03900 Porphobilinogen deaminase, C-terminal domain F11_RS18310 PF00814 Glycoprotease family F11_RS18320 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F11_RS18320 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F11_RS18340 PF13193 AMP-binding enzyme C-terminal domain F11_RS18340 PF00501 AMP-binding enzyme F11_RS18340 PF16177 Acetyl-coenzyme A synthetase N-terminus F11_RS18345 PF01370 NAD dependent epimerase/dehydratase family F11_RS18360 PF01435 Peptidase family M48 F11_RS18370 PF01329 Pterin 4 alpha carbinolamine dehydratase F11_RS18380 PF13654 AAA domain F11_RS18380 PF05362 Lon protease (S16) C-terminal proteolytic domain F11_RS18385 PF01066 CDP-alcohol phosphatidyltransferase F11_RS18390 PF02666 Phosphatidylserine decarboxylase F11_RS18410 PF13335 Magnesium chelatase, subunit ChlI C-terminal F11_RS18410 PF01078 Magnesium chelatase, subunit ChlI F11_RS18425 PF01230 HIT domain F11_RS18430 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F11_RS18435 PF00977 Histidine biosynthesis protein F11_RS18440 PF00977 Histidine biosynthesis protein F11_RS18445 PF00117 Glutamine amidotransferase class-I F11_RS18450 PF00475 Imidazoleglycerol-phosphate dehydratase F11_RS18455 PF01381 Helix-turn-helix F11_RS18460 PF00227 Proteasome subunit F11_RS18465 PF07724 AAA domain (Cdc48 subfamily) F11_RS18465 PF10431 C-terminal, D2-small domain, of ClpB protein F11_RS18465 PF00004 ATPase family associated with various cellular activities (AAA) F11_RS18480 PF02589 LUD domain F11_RS18490 PF11870 Domain of unknown function (DUF3390) F11_RS18490 PF13183 4Fe-4S dicluster domain F11_RS18490 PF02589 LUD domain F11_RS18495 PF02754 Cysteine-rich domain F11_RS18515 PF02556 Preprotein translocase subunit SecB F11_RS18520 PF00929 Exonuclease F11_RS18525 PF01121 Dephospho-CoA kinase F11_RS18530 PF01488 Shikimate / quinate 5-dehydrogenase F11_RS18530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F11_RS18530 PF08501 Shikimate dehydrogenase substrate binding domain F11_RS18535 PF02545 Maf-like protein F11_RS18540 PF03618 Kinase/pyrophosphorylase F11_RS18545 PF01208 Uroporphyrinogen decarboxylase (URO-D) F11_RS18550 PF00762 Ferrochelatase F11_RS18555 PF03653 Uncharacterised protein family (UPF0093) F11_RS18560 PF07497 Rho termination factor, RNA-binding domain F11_RS18560 PF07498 Rho termination factor, N-terminal domain F11_RS18560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F11_RS18565 PF08240 Alcohol dehydrogenase GroES-like domain F11_RS18565 PF00107 Zinc-binding dehydrogenase F11_RS18570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F11_RS18570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F11_RS18575 PF03190 Protein of unknown function, DUF255 F11_RS18585 PF12631 MnmE helical domain F11_RS18585 PF10396 GTP-binding protein TrmE N-terminus F11_RS18585 PF01926 50S ribosome-binding GTPase F11_RS18590 PF01134 Glucose inhibited division protein A F11_RS18590 PF13932 GidA associated domain F11_RS18595 PF02527 rRNA small subunit methyltransferase G F11_RS18600 PF13614 AAA domain F11_RS18605 PF17762 HTH domain found in ParB protein F11_RS18605 PF02195 ParB-like nuclease domain F11_RS18620 PF00133 tRNA synthetases class I (I, L, M and V) F11_RS18620 PF08264 Anticodon-binding domain of tRNA F11_RS18620 PF13603 Leucyl-tRNA synthetase, Domain 2 F11_RS18635 PF01168 Alanine racemase, N-terminal domain F11_RS18650 PF00925 GTP cyclohydrolase II F11_RS18655 PF00072 Response regulator receiver domain F11_RS18655 PF00486 Transcriptional regulatory protein, C terminal F11_RS18660 PF04055 Radical SAM superfamily F11_RS18660 PF06969 HemN C-terminal domain F11_RS18665 PF01725 Ham1 family F11_RS18670 PF03725 3' exoribonuclease family, domain 2 F11_RS18670 PF01138 3' exoribonuclease family, domain 1 F11_RS18675 PF01628 HrcA protein C terminal domain F11_RS18680 PF01025 GrpE F11_RS18685 PF03167 Uracil DNA glycosylase superfamily F11_RS18690 PF02146 Sir2 family F11_RS18695 PF01451 Low molecular weight phosphotyrosine protein phosphatase F11_RS18705 PF03881 Fructosamine kinase F11_RS18710 PF02834 LigT like Phosphoesterase F11_RS18715 PF13472 GDSL-like Lipase/Acylhydrolase family F11_RS18720 PF00005 ABC transporter F11_RS18730 PF12704 MacB-like periplasmic core domain F11_RS18730 PF02687 FtsX-like permease family F11_RS18730 PF00005 ABC transporter F11_RS18735 PF01906 Putative heavy-metal-binding F11_RS18740 PF01808 AICARFT/IMPCHase bienzyme F11_RS18740 PF02142 MGS-like domain F11_RS18745 PF02719 Polysaccharide biosynthesis protein F11_RS18750 PF00953 Glycosyl transferase family 4 F11_RS18760 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase F11_RS18765 PF01189 16S rRNA methyltransferase RsmB/F F11_RS18765 PF01029 NusB family F11_RS18780 PF05088 Bacterial NAD-glutamate dehydrogenase F11_RS18785 PF00005 ABC transporter F11_RS18790 PF08269 Cache domain F11_RS18790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F11_RS18805 PF04073 Aminoacyl-tRNA editing domain F11_RS18810 PF03350 Uncharacterized protein family, UPF0114 F11_RS18815 PF02254 TrkA-N domain F11_RS18815 PF00999 Sodium/hydrogen exchanger family F11_RS18820 PF02355 Protein export membrane protein F11_RS18820 PF07549 SecD/SecF GG Motif F11_RS18830 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F11_RS18845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F11_RS18850 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F11_RS18855 PF03480 Bacterial extracellular solute-binding protein, family 7 F11_RS18860 PF01098 Cell cycle protein F11_RS18865 PF03741 Integral membrane protein TerC family F11_RS18870 PF04264 YceI-like domain F11_RS18875 PF01292 Prokaryotic cytochrome b561 F11_RS18885 PF13181 Tetratricopeptide repeat F11_RS18890 PF01037 Lrp/AsnC ligand binding domain F11_RS18895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F11_RS18895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F11_RS18900 PF02361 Cobalt transport protein F11_RS18905 PF00005 ABC transporter F11_RS18915 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F11_RS18915 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F11_RS18925 PF02021 Uncharacterised protein family UPF0102 F11_RS18930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F11_RS18940 PF00501 AMP-binding enzyme F11_RS18940 PF13193 AMP-binding enzyme C-terminal domain F11_RS18950 PF01557 Fumarylacetoacetate (FAA) hydrolase family F11_RS18960 PF00873 AcrB/AcrD/AcrF family F11_RS18965 PF13533 Biotin-lipoyl like F11_RS18970 PF00440 Bacterial regulatory proteins, tetR family F11_RS18975 PF00005 ABC transporter F11_RS18980 PF00950 ABC 3 transport family F11_RS18985 PF01297 Zinc-uptake complex component A periplasmic F11_RS18990 PF01580 FtsK/SpoIIIE family F11_RS18990 PF17854 FtsK alpha domain F11_RS18990 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F11_RS18990 PF09397 Ftsk gamma domain F11_RS18995 PF00155 Aminotransferase class I and II F11_RS19000 PF01494 FAD binding domain F11_RS19010 PF03966 Trm112p-like protein F11_RS19020 PF00085 Thioredoxin F11_RS19035 PF02586 SOS response associated peptidase (SRAP) F11_RS19055 PF03808 Glycosyl transferase WecB/TagA/CpsF family F11_RS19075 PF02397 Bacterial sugar transferase F11_RS19085 PF03738 Glutathionylspermidine synthase preATP-grasp F11_RS19085 PF05257 CHAP domain F11_RS19090 PF00005 ABC transporter F11_RS19090 PF12399 Branched-chain amino acid ATP-binding cassette transporter F11_RS19095 PF00005 ABC transporter F11_RS19100 PF02653 Branched-chain amino acid transport system / permease component F11_RS19110 PF13458 Periplasmic binding protein F11_RS19115 PF02633 Creatinine amidohydrolase F11_RS19120 PF17763 Glutaminase/Asparaginase C-terminal domain F11_RS19120 PF00710 Asparaginase, N-terminal F11_RS19125 PF00392 Bacterial regulatory proteins, gntR family F11_RS19125 PF07729 FCD domain F11_RS19140 PF00749 tRNA synthetases class I (E and Q), catalytic domain F11_RS19160 PF02899 Phage integrase, N-terminal SAM-like domain F11_RS19160 PF00589 Phage integrase family F11_RS19170 PF01202 Shikimate kinase F11_RS19175 PF01761 3-dehydroquinate synthase F11_RS19180 PF03471 Transporter associated domain F11_RS19180 PF00571 CBS domain F11_RS19190 PF00571 CBS domain F11_RS19200 PF01386 Ribosomal L25p family F11_RS19200 PF14693 Ribosomal protein TL5, C-terminal domain F11_RS19205 PF01195 Peptidyl-tRNA hydrolase F11_RS19210 PF01926 50S ribosome-binding GTPase F11_RS19210 PF06071 Protein of unknown function (DUF933) F11_RS19215 PF02463 RecF/RecN/SMC N terminal domain F11_RS19215 PF06470 SMC proteins Flexible Hinge Domain F11_RS19225 PF00764 Arginosuccinate synthase F11_RS19245 PF00011 Hsp20/alpha crystallin family F11_RS19250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F11_RS19250 PF00512 His Kinase A (phospho-acceptor) domain F11_RS19250 PF09308 LuxQ, periplasmic F11_RS19250 PF00072 Response regulator receiver domain F11_RS19275 PF00012 Hsp70 protein F11_RS19280 PF01427 D-ala-D-ala dipeptidase F11_RS19285 PF00814 Glycoprotease family F11_RS19300 PF05443 ROS/MUCR transcriptional regulator protein F11_RS19305 PF01475 Ferric uptake regulator family F11_RS19315 PF01553 Acyltransferase F11_RS19320 PF04055 Radical SAM superfamily F11_RS19320 PF00919 Uncharacterized protein family UPF0004 F11_RS19325 PF02562 PhoH-like protein F11_RS19330 PF02130 Uncharacterized protein family UPF0054 F11_RS19335 PF03471 Transporter associated domain F11_RS19335 PF00571 CBS domain F11_RS19340 PF00795 Carbon-nitrogen hydrolase F11_RS19345 PF01381 Helix-turn-helix F11_RS19350 PF00438 S-adenosylmethionine synthetase, N-terminal domain F11_RS19350 PF02772 S-adenosylmethionine synthetase, central domain F11_RS19350 PF02773 S-adenosylmethionine synthetase, C-terminal domain F11_RS19355 PF02390 Putative methyltransferase F11_RS19360 PF17384 RimP C-terminal SH3 domain F11_RS19360 PF02576 RimP N-terminal domain F11_RS19365 PF00575 S1 RNA binding domain F11_RS19365 PF08529 NusA N-terminal domain F11_RS19365 PF13184 NusA-like KH domain F11_RS19375 PF08364 Bacterial translation initiation factor IF-2 associated region F11_RS19375 PF11987 Translation-initiation factor 2 F11_RS19375 PF00009 Elongation factor Tu GTP binding domain F11_RS19375 PF03144 Elongation factor Tu domain 2 F11_RS19375 PF04760 Translation initiation factor IF-2, N-terminal region F11_RS19380 PF02033 Ribosome-binding factor A F11_RS19385 PF16198 tRNA pseudouridylate synthase B C-terminal domain F11_RS19385 PF01509 TruB family pseudouridylate synthase (N terminal domain) F11_RS19385 PF09157 Pseudouridine synthase II TruB, C-terminal F11_RS19390 PF00312 Ribosomal protein S15 F11_RS19395 PF00013 KH domain F11_RS19395 PF03725 3' exoribonuclease family, domain 2 F11_RS19395 PF01138 3' exoribonuclease family, domain 1 F11_RS19395 PF00575 S1 RNA binding domain F11_RS19395 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F11_RS19400 PF03009 Glycerophosphoryl diester phosphodiesterase family F11_RS19420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F11_RS19420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F11_RS19435 PF00899 ThiF family F11_RS19440 PF00291 Pyridoxal-phosphate dependent enzyme F11_RS19445 PF02082 Transcriptional regulator F11_RS19450 PF04127 DNA / pantothenate metabolism flavoprotein F11_RS19450 PF02441 Flavoprotein F11_RS19455 PF03109 ABC1 family F11_RS19460 PF01209 ubiE/COQ5 methyltransferase family F11_RS19465 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F11_RS19465 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F11_RS19475 PF00378 Enoyl-CoA hydratase/isomerase F11_RS19480 PF01649 Ribosomal protein S20 F11_RS19505 PF03330 Lytic transglycolase F11_RS19525 PF13439 Glycosyltransferase Family 4 F11_RS19525 PF00534 Glycosyl transferases group 1 F11_RS19535 PF00563 EAL domain F11_RS19535 PF03707 Bacterial signalling protein N terminal repeat F11_RS19535 PF13188 PAS domain F11_RS19535 PF00990 Diguanylate cyclase, GGDEF domain