F11_RS00005	SM00382	ATPases associated with a variety of cellular activities
F11_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
F11_RS00010	SM00480	DNA polymerase III beta subunit
F11_RS00020	SM00387	Histidine kinase-like ATPases
F11_RS00020	SM00433	TopoisomeraseII
F11_RS00030	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS00055	SM00382	ATPases associated with a variety of cellular activities
F11_RS00075	SM00474	3'-5' exonuclease
F11_RS00110	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS00125	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F11_RS00145	SM00849	Metallo-beta-lactamase superfamily
F11_RS00165	SM00028	Tetratricopeptide repeats
F11_RS00205	SM00382	ATPases associated with a variety of cellular activities
F11_RS00230	SM00825	Beta-ketoacyl synthase
F11_RS00240	SM00382	ATPases associated with a variety of cellular activities
F11_RS00265	SM00878	Biotin carboxylase C-terminal domain
F11_RS00265	SM01209	F11_RS00265
F11_RS00275	SM00861	Transketolase, pyrimidine binding domain
F11_RS00335	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS00335	SM00091	PAS domain
F11_RS00335	SM00387	Histidine kinase-like ATPases
F11_RS00335	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS00350	SM00382	ATPases associated with a variety of cellular activities
F11_RS00370	SM00387	Histidine kinase-like ATPases
F11_RS00380	SM00490	helicase superfamily c-terminal domain
F11_RS00385	SM00363	S4 RNA-binding domain
F11_RS00400	SM01058	CarD-like/TRCF domain
F11_RS00420	SM00318	Staphylococcal nuclease homologues
F11_RS00430	SM00267	diguanylate cyclase
F11_RS00430	SM00448	cheY-homologous receiver domain
F11_RS00445	SM00829	Enoylreductase
F11_RS00450	SM00341	Helicase and RNase D C-terminal
F11_RS00450	SM00487	DEAD-like helicases superfamily
F11_RS00450	SM00490	helicase superfamily c-terminal domain
F11_RS00450	SM00956	F11_RS00450
F11_RS00480	SM00382	ATPases associated with a variety of cellular activities
F11_RS00500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS00500	SM00331	Sigma factor PP2C-like phosphatases
F11_RS00515	SM00267	diguanylate cyclase
F11_RS00530	SM01359	F11_RS00530
F11_RS00530	SM01360	F11_RS00530
F11_RS00540	SM00028	Tetratricopeptide repeats
F11_RS00575	SM00382	ATPases associated with a variety of cellular activities
F11_RS00595	SM00382	ATPases associated with a variety of cellular activities
F11_RS00600	SM00382	ATPases associated with a variety of cellular activities
F11_RS00610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS00640	SM00382	ATPases associated with a variety of cellular activities
F11_RS00665	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS00665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS00710	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS00715	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS00720	SM01004	Delta-aminolevulinic acid dehydratase
F11_RS00780	SM00478	endonuclease III
F11_RS00805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS00805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS00805	SM01049	F11_RS00805
F11_RS00820	SM00883	Chaperonin 10 Kd subunit
F11_RS00830	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS00885	SM01101	F11_RS00885
F11_RS00910	SM00490	helicase superfamily c-terminal domain
F11_RS00975	SM00382	ATPases associated with a variety of cellular activities
F11_RS00980	SM00382	ATPases associated with a variety of cellular activities
F11_RS01000	SM00825	Beta-ketoacyl synthase
F11_RS01040	SM00155	Phospholipase D. Active site motifs.
F11_RS01055	SM00271	DnaJ molecular chaperone homology domain
F11_RS01065	SM00327	von Willebrand factor (vWF) type A domain
F11_RS01070	SM00487	DEAD-like helicases superfamily
F11_RS01070	SM00490	helicase superfamily c-terminal domain
F11_RS01110	SM00344	helix_turn_helix ASNC type
F11_RS01140	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
F11_RS01205	SM00957	SecA DEAD-like domain
F11_RS01205	SM00958	SecA preprotein cross-linking domain
F11_RS01250	SM00116	Domain in cystathionine beta-synthase and other proteins.
F11_RS01250	SM01240	F11_RS01250
F11_RS01280	SM00382	ATPases associated with a variety of cellular activities
F11_RS01290	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS01295	SM00829	Enoylreductase
F11_RS01345	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS01355	SM00028	Tetratricopeptide repeats
F11_RS01365	SM00986	Uracil DNA glycosylase superfamily
F11_RS01365	SM00987	UreE urease accessory protein, C-terminal domain 
F11_RS01375	SM00852	Probable molybdopterin binding domain
F11_RS01400	SM00822	F11_RS01400
F11_RS01425	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS01495	SM00411	bacterial (prokaryotic) histone like domain
F11_RS01500	SM00316	Ribosomal protein S1-like RNA-binding domain
F11_RS01565	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS01610	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
F11_RS01665	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
F11_RS01670	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS01675	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
F11_RS01675	SM00382	ATPases associated with a variety of cellular activities
F11_RS01680	SM00387	Histidine kinase-like ATPases
F11_RS01680	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS01750	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
F11_RS01750	SM00487	DEAD-like helicases superfamily
F11_RS01785	SM01101	F11_RS01785
F11_RS01835	SM01329	F11_RS01835
F11_RS01850	SM01007	Class II Aldolase and Adducin N-terminal domain
F11_RS01940	SM00448	cheY-homologous receiver domain
F11_RS01940	SM00850	LytTr DNA-binding domain
F11_RS01980	SM00422	helix_turn_helix, mercury resistance
F11_RS01985	SM00326	Src homology 3 domains
F11_RS01990	SM00829	Enoylreductase
F11_RS02000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F11_RS02035	SM00852	Probable molybdopterin binding domain
F11_RS02075	SM00014	Acid phosphatase homologues
F11_RS02090	SM00953	F11_RS02090
F11_RS02110	SM00382	ATPases associated with a variety of cellular activities
F11_RS02115	SM00382	ATPases associated with a variety of cellular activities
F11_RS02125	SM01005	Alanine racemase, C-terminal domain
F11_RS02155	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
F11_RS02160	SM00822	F11_RS02160
F11_RS02170	SM00825	Beta-ketoacyl synthase
F11_RS02220	SM00072	Guanylate kinase homologues.
F11_RS02230	SM00650	Ribosomal RNA adenine dimethylases
F11_RS02265	SM00091	PAS domain
F11_RS02265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS02265	SM00387	Histidine kinase-like ATPases
F11_RS02270	SM00062	Bacterial periplasmic substrate-binding proteins
F11_RS02280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS02280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS02280	SM01358	F11_RS02280
F11_RS02340	SM00507	HNH nucleases
F11_RS02395	SM01119	F11_RS02395
F11_RS02450	SM00829	Enoylreductase
F11_RS02500	SM00382	ATPases associated with a variety of cellular activities
F11_RS02505	SM00327	von Willebrand factor (vWF) type A domain
F11_RS02530	SM00382	ATPases associated with a variety of cellular activities
F11_RS02555	SM00100	Cyclic nucleotide-monophosphate binding domain
F11_RS02560	SM00382	ATPases associated with a variety of cellular activities
F11_RS02600	SM00642	Alpha-amylase domain
F11_RS02605	SM00642	Alpha-amylase domain
F11_RS02610	SM00642	Alpha-amylase domain
F11_RS02630	SM00487	DEAD-like helicases superfamily
F11_RS02630	SM00490	helicase superfamily c-terminal domain
F11_RS02665	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS02680	SM00073	Histidine Phosphotransfer domain
F11_RS02680	SM00260	Two component signalling adaptor domain
F11_RS02680	SM00387	Histidine kinase-like ATPases
F11_RS02680	SM00448	cheY-homologous receiver domain
F11_RS02680	SM01231	F11_RS02680
F11_RS02685	SM00448	cheY-homologous receiver domain
F11_RS02690	SM00448	cheY-homologous receiver domain
F11_RS02695	SM00138	Methyltransferase, chemotaxis proteins 
F11_RS02700	SM00448	cheY-homologous receiver domain
F11_RS02700	SM00862	Transcriptional regulatory protein, C terminal
F11_RS02705	SM00382	ATPases associated with a variety of cellular activities
F11_RS02715	SM00271	DnaJ molecular chaperone homology domain
F11_RS02740	SM00382	ATPases associated with a variety of cellular activities
F11_RS02740	SM00962	SRP54-type protein, GTPase domain
F11_RS02755	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS02760	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS02775	SM00382	ATPases associated with a variety of cellular activities
F11_RS02825	SM00028	Tetratricopeptide repeats
F11_RS02830	SM00028	Tetratricopeptide repeats
F11_RS02840	SM00387	Histidine kinase-like ATPases
F11_RS02840	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS02850	SM00938	Nitrogen regulatory protein P-II
F11_RS02865	SM00052	Putative diguanylate phosphodiesterase
F11_RS02865	SM00267	diguanylate cyclase
F11_RS02915	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS02915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS02915	SM01358	F11_RS02915
F11_RS02920	SM00830	Chorismate mutase type II
F11_RS02955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS02955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS02960	SM00046	Diacylglycerol kinase catalytic domain (presumed)
F11_RS03000	SM00382	ATPases associated with a variety of cellular activities
F11_RS03005	SM00883	Chaperonin 10 Kd subunit
F11_RS03015	SM00382	ATPases associated with a variety of cellular activities
F11_RS03020	SM00382	ATPases associated with a variety of cellular activities
F11_RS03050	SM00861	Transketolase, pyrimidine binding domain
F11_RS03080	SM00382	ATPases associated with a variety of cellular activities
F11_RS03090	SM00448	cheY-homologous receiver domain
F11_RS03090	SM00862	Transcriptional regulatory protein, C terminal
F11_RS03135	SM00052	Putative diguanylate phosphodiesterase
F11_RS03135	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS03135	SM00091	PAS domain
F11_RS03135	SM00267	diguanylate cyclase
F11_RS03140	SM00989	F11_RS03140
F11_RS03205	SM00091	PAS domain
F11_RS03230	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS03230	SM00267	diguanylate cyclase
F11_RS03235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS03235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS03235	SM01049	F11_RS03235
F11_RS03240	SM00479	F11_RS03240
F11_RS03245	SM00116	Domain in cystathionine beta-synthase and other proteins.
F11_RS03300	SM01400	F11_RS03300
F11_RS03305	SM01209	F11_RS03305
F11_RS03305	SM01210	F11_RS03305
F11_RS03335	SM00363	S4 RNA-binding domain
F11_RS03350	SM00344	helix_turn_helix ASNC type
F11_RS03370	SM00052	Putative diguanylate phosphodiesterase
F11_RS03370	SM00267	diguanylate cyclase
F11_RS03375	SM00387	Histidine kinase-like ATPases
F11_RS03390	SM00357	Cold shock protein domain
F11_RS03395	SM00448	cheY-homologous receiver domain
F11_RS03400	SM00448	cheY-homologous receiver domain
F11_RS03405	SM00387	Histidine kinase-like ATPases
F11_RS03405	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS03420	SM00855	Phosphoglycerate mutase family
F11_RS03430	SM00833	Cobalamin synthesis protein cobW C-terminal domain
F11_RS03530	SM00840	F11_RS03530
F11_RS03535	SM00091	PAS domain
F11_RS03535	SM00387	Histidine kinase-like ATPases
F11_RS03535	SM00897	FIST N domain
F11_RS03535	SM01204	F11_RS03535
F11_RS03540	SM00448	cheY-homologous receiver domain
F11_RS03545	SM00448	cheY-homologous receiver domain
F11_RS03550	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
F11_RS03550	SM00387	Histidine kinase-like ATPases
F11_RS03555	SM00448	cheY-homologous receiver domain
F11_RS03560	SM00917	LeuA allosteric (dimerisation) domain
F11_RS03595	SM00363	S4 RNA-binding domain
F11_RS03595	SM01390	F11_RS03595
F11_RS03600	SM00382	ATPases associated with a variety of cellular activities
F11_RS03635	SM01211	F11_RS03635
F11_RS03650	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS03670	SM00998	Adenylosuccinate lyase C-terminus
F11_RS03675	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS03680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS03680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS03680	SM01358	F11_RS03680
F11_RS03690	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS03795	SM00911	HWE histidine kinase
F11_RS03815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
F11_RS03840	SM00937	F11_RS03840
F11_RS03855	SM00382	ATPases associated with a variety of cellular activities
F11_RS03855	SM01086	C-terminal, D2-small domain, of ClpB protein
F11_RS03865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS03865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS03870	SM00116	Domain in cystathionine beta-synthase and other proteins.
F11_RS03870	SM01091	Transporter associated domain
F11_RS03880	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS03900	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS03905	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS03930	SM00382	ATPases associated with a variety of cellular activities
F11_RS04020	SM00062	Bacterial periplasmic substrate-binding proteins
F11_RS04040	SM00953	F11_RS04040
F11_RS04060	SM00116	Domain in cystathionine beta-synthase and other proteins.
F11_RS04065	SM00382	ATPases associated with a variety of cellular activities
F11_RS04065	SM00930	F11_RS04065
F11_RS04090	SM00971	Serine acetyltransferase, N-terminal
F11_RS04140	SM00382	ATPases associated with a variety of cellular activities
F11_RS04145	SM00382	ATPases associated with a variety of cellular activities
F11_RS04205	SM00953	F11_RS04205
F11_RS04275	SM00487	DEAD-like helicases superfamily
F11_RS04315	SM00369	Leucine-rich repeats, typical (most populated) subfamily
F11_RS04325	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS04335	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS04345	SM00382	ATPases associated with a variety of cellular activities
F11_RS04350	SM00382	ATPases associated with a variety of cellular activities
F11_RS04445	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS04450	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS04455	SM00382	ATPases associated with a variety of cellular activities
F11_RS04460	SM00382	ATPases associated with a variety of cellular activities
F11_RS04480	SM00320	WD40 repeats
F11_RS04530	SM00382	ATPases associated with a variety of cellular activities
F11_RS04535	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS04545	SM00382	ATPases associated with a variety of cellular activities
F11_RS04550	SM00382	ATPases associated with a variety of cellular activities
F11_RS04565	SM00965	Secretin and TonB N terminus short domain
F11_RS04665	SM00877	F11_RS04665
F11_RS04670	SM00877	F11_RS04670
F11_RS04675	SM00877	F11_RS04675
F11_RS04680	SM00877	F11_RS04680
F11_RS04715	SM00877	F11_RS04715
F11_RS04735	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS04735	SM00448	cheY-homologous receiver domain
F11_RS04805	SM00382	ATPases associated with a variety of cellular activities
F11_RS04840	SM00292	breast cancer carboxy-terminal domain
F11_RS04840	SM00532	Ligase N family
F11_RS04865	SM00864	Tubulin/FtsZ family, GTPase domain
F11_RS04865	SM00865	Tubulin/FtsZ family, C-terminal domain
F11_RS04870	SM00842	Cell division protein FtsA
F11_RS04945	SM00644	F11_RS04945
F11_RS04950	SM00271	DnaJ molecular chaperone homology domain
F11_RS04975	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
F11_RS04980	SM01092	CO dehydrogenase flavoprotein C-terminal domain
F11_RS04985	SM00382	ATPases associated with a variety of cellular activities
F11_RS04990	SM00327	von Willebrand factor (vWF) type A domain
F11_RS05050	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS05070	SM00382	ATPases associated with a variety of cellular activities
F11_RS05085	SM00267	diguanylate cyclase
F11_RS05110	SM00052	Putative diguanylate phosphodiesterase
F11_RS05110	SM00267	diguanylate cyclase
F11_RS05110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS05125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
F11_RS05125	SM00382	ATPases associated with a variety of cellular activities
F11_RS05165	SM00382	ATPases associated with a variety of cellular activities
F11_RS05180	SM00062	Bacterial periplasmic substrate-binding proteins
F11_RS05225	SM00382	ATPases associated with a variety of cellular activities
F11_RS05245	SM00382	ATPases associated with a variety of cellular activities
F11_RS05280	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS05290	SM00422	helix_turn_helix, mercury resistance
F11_RS05305	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS05330	SM00091	PAS domain
F11_RS05335	SM00052	Putative diguanylate phosphodiesterase
F11_RS05335	SM00267	diguanylate cyclase
F11_RS05360	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
F11_RS05415	SM01001	AIR carboxylase
F11_RS05425	SM00448	cheY-homologous receiver domain
F11_RS05430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS05445	SM00829	Enoylreductase
F11_RS05495	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS05500	SM00382	ATPases associated with a variety of cellular activities
F11_RS05525	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
F11_RS05555	SM00841	Elongation factor P, C-terminal
F11_RS05555	SM01185	F11_RS05555
F11_RS05565	SM01091	Transporter associated domain
F11_RS05610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
F11_RS05615	SM00382	ATPases associated with a variety of cellular activities
F11_RS05660	SM00382	ATPases associated with a variety of cellular activities
F11_RS05700	SM00788	Adenylosuccinate synthetase
F11_RS05715	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS05715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS05715	SM01049	F11_RS05715
F11_RS05725	SM00363	S4 RNA-binding domain
F11_RS05745	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS05770	SM00382	ATPases associated with a variety of cellular activities
F11_RS05775	SM00878	Biotin carboxylase C-terminal domain
F11_RS05780	SM00849	Metallo-beta-lactamase superfamily
F11_RS05795	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS05825	SM00938	Nitrogen regulatory protein P-II
F11_RS05840	SM00487	DEAD-like helicases superfamily
F11_RS05840	SM00490	helicase superfamily c-terminal domain
F11_RS05870	SM00382	ATPases associated with a variety of cellular activities
F11_RS05880	SM00838	Elongation factor G C-terminus
F11_RS05880	SM00889	Elongation factor G, domain IV
F11_RS05895	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS05990	SM00387	Histidine kinase-like ATPases
F11_RS05990	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS05995	SM00448	cheY-homologous receiver domain
F11_RS05995	SM00862	Transcriptional regulatory protein, C terminal
F11_RS06000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS06000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS06000	SM01049	F11_RS06000
F11_RS06050	SM00382	ATPases associated with a variety of cellular activities
F11_RS06050	SM00448	cheY-homologous receiver domain
F11_RS06065	SM00344	helix_turn_helix ASNC type
F11_RS06070	SM00028	Tetratricopeptide repeats
F11_RS06090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS06100	SM00420	helix_turn_helix, Deoxyribose operon repressor
F11_RS06100	SM01134	F11_RS06100
F11_RS06110	SM00382	ATPases associated with a variety of cellular activities
F11_RS06110	SM00962	SRP54-type protein, GTPase domain
F11_RS06110	SM00963	SRP54-type protein, helical bundle domain
F11_RS06115	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS06125	SM00382	ATPases associated with a variety of cellular activities
F11_RS06125	SM00962	SRP54-type protein, GTPase domain
F11_RS06125	SM00963	SRP54-type protein, helical bundle domain
F11_RS06160	SM01329	F11_RS06160
F11_RS06185	SM00859	Semialdehyde dehydrogenase, NAD binding domain
F11_RS06190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS06190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS06265	SM00881	CoA binding domain
F11_RS06270	SM00861	Transketolase, pyrimidine binding domain
F11_RS06300	SM00382	ATPases associated with a variety of cellular activities
F11_RS06315	SM00487	DEAD-like helicases superfamily
F11_RS06315	SM00490	helicase superfamily c-terminal domain
F11_RS06335	SM00382	ATPases associated with a variety of cellular activities
F11_RS06365	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F11_RS06365	SM00245	tail specific protease
F11_RS06400	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
F11_RS06435	SM00419	helix_turn_helix, cAMP Regulatory protein
F11_RS06445	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS06470	SM01230	F11_RS06470
F11_RS06475	SM01230	F11_RS06475
F11_RS06485	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS06485	SM00895	F11_RS06485
F11_RS06510	SM00382	ATPases associated with a variety of cellular activities
F11_RS06530	SM00822	F11_RS06530
F11_RS06535	SM00420	helix_turn_helix, Deoxyribose operon repressor
F11_RS06535	SM01134	F11_RS06535
F11_RS06570	SM00091	PAS domain
F11_RS06570	SM00267	diguanylate cyclase
F11_RS06595	SM00387	Histidine kinase-like ATPases
F11_RS06595	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS06595	SM00448	cheY-homologous receiver domain
F11_RS06625	SM00448	cheY-homologous receiver domain
F11_RS06625	SM00862	Transcriptional regulatory protein, C terminal
F11_RS06640	SM00320	WD40 repeats
F11_RS06655	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS06660	SM00098	Alkaline phosphatase homologues
F11_RS06670	SM00382	ATPases associated with a variety of cellular activities
F11_RS06680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS06680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS06685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS06685	SM00866	F11_RS06685
F11_RS06690	SM00062	Bacterial periplasmic substrate-binding proteins
F11_RS06690	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
F11_RS06705	SM00382	ATPases associated with a variety of cellular activities
F11_RS06770	SM00422	helix_turn_helix, mercury resistance
F11_RS06870	SM00382	ATPases associated with a variety of cellular activities
F11_RS06900	SM00382	ATPases associated with a variety of cellular activities
F11_RS06920	SM01120	F11_RS06920
F11_RS06930	SM00346	helix_turn_helix isocitrate lyase regulation
F11_RS06935	SM01133	F11_RS06935
F11_RS06945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS06945	SM00895	F11_RS06945
F11_RS06990	SM01060	F11_RS06990
F11_RS07010	SM01120	F11_RS07010
F11_RS07030	SM00382	ATPases associated with a variety of cellular activities
F11_RS07120	SM00882	Coenzyme A transferase
F11_RS07125	SM00882	Coenzyme A transferase
F11_RS07130	SM00091	PAS domain
F11_RS07130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS07130	SM00387	Histidine kinase-like ATPases
F11_RS07130	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS07135	SM00382	ATPases associated with a variety of cellular activities
F11_RS07135	SM00448	cheY-homologous receiver domain
F11_RS07140	SM00487	DEAD-like helicases superfamily
F11_RS07140	SM00490	helicase superfamily c-terminal domain
F11_RS07150	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
F11_RS07150	SM00382	ATPases associated with a variety of cellular activities
F11_RS07200	SM00448	cheY-homologous receiver domain
F11_RS07205	SM00073	Histidine Phosphotransfer domain
F11_RS07205	SM00260	Two component signalling adaptor domain
F11_RS07205	SM00387	Histidine kinase-like ATPases
F11_RS07205	SM01231	F11_RS07205
F11_RS07210	SM00260	Two component signalling adaptor domain
F11_RS07215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS07215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS07220	SM00260	Two component signalling adaptor domain
F11_RS07225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS07225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS07230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS07230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS07235	SM00138	Methyltransferase, chemotaxis proteins 
F11_RS07240	SM00448	cheY-homologous receiver domain
F11_RS07250	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS07250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS07280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS07280	SM00895	F11_RS07280
F11_RS07365	SM00419	helix_turn_helix, cAMP Regulatory protein
F11_RS07385	SM00382	ATPases associated with a variety of cellular activities
F11_RS07385	SM00448	cheY-homologous receiver domain
F11_RS07390	SM00387	Histidine kinase-like ATPases
F11_RS07390	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS07410	SM00965	Secretin and TonB N terminus short domain
F11_RS07415	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS07445	SM00382	ATPases associated with a variety of cellular activities
F11_RS07460	SM00226	Low molecular weight phosphatase family
F11_RS07460	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F11_RS07490	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS07515	SM00917	LeuA allosteric (dimerisation) domain
F11_RS07520	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS07565	SM00882	Coenzyme A transferase
F11_RS07570	SM00882	Coenzyme A transferase
F11_RS07600	SM00382	ATPases associated with a variety of cellular activities
F11_RS07635	SM00710	Parallel beta-helix repeats
F11_RS07695	SM00382	ATPases associated with a variety of cellular activities
F11_RS07710	SM00138	Methyltransferase, chemotaxis proteins 
F11_RS07710	SM00387	Histidine kinase-like ATPases
F11_RS07710	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS07710	SM00421	helix_turn_helix, Lux Regulon
F11_RS07710	SM00448	cheY-homologous receiver domain
F11_RS07720	SM00749	bacterial OsmY and nodulation domain
F11_RS07730	SM00829	Enoylreductase
F11_RS07740	SM00797	Allophanate hydrolase subunit 2
F11_RS07745	SM00796	Allophanate hydrolase subunit 1
F11_RS07750	SM00822	F11_RS07750
F11_RS07820	SM00357	Cold shock protein domain
F11_RS07825	SM00849	Metallo-beta-lactamase superfamily
F11_RS07850	SM00382	ATPases associated with a variety of cellular activities
F11_RS07860	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F11_RS07870	SM01018	B12 binding domain
F11_RS07875	SM00028	Tetratricopeptide repeats
F11_RS07890	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS07935	SM00052	Putative diguanylate phosphodiesterase
F11_RS07935	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS07935	SM00091	PAS domain
F11_RS07935	SM00267	diguanylate cyclase
F11_RS07940	SM00267	diguanylate cyclase
F11_RS07975	SM00382	ATPases associated with a variety of cellular activities
F11_RS07975	SM00994	ClpX C4-type zinc finger
F11_RS07975	SM01086	C-terminal, D2-small domain, of ClpB protein
F11_RS07980	SM00382	ATPases associated with a variety of cellular activities
F11_RS07980	SM00464	Found in ATP-dependent protease La (LON)
F11_RS07985	SM00411	bacterial (prokaryotic) histone like domain
F11_RS07995	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS08025	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
F11_RS08030	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
F11_RS08080	SM00849	Metallo-beta-lactamase superfamily
F11_RS08120	SM00382	ATPases associated with a variety of cellular activities
F11_RS08135	SM00481	DNA polymerase alpha chain like domain
F11_RS08140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS08140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS08140	SM01049	F11_RS08140
F11_RS08145	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS08145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS08145	SM01049	F11_RS08145
F11_RS08190	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F11_RS08200	SM00935	Outer membrane protein (OmpH-like)
F11_RS08245	SM00642	Alpha-amylase domain
F11_RS08250	SM00642	Alpha-amylase domain
F11_RS08255	SM00642	Alpha-amylase domain
F11_RS08280	SM00833	Cobalamin synthesis protein cobW C-terminal domain
F11_RS08300	SM00450	Rhodanese Homology Domain
F11_RS08335	SM00100	Cyclic nucleotide-monophosphate binding domain
F11_RS08445	SM00382	ATPases associated with a variety of cellular activities
F11_RS08500	SM00091	PAS domain
F11_RS08500	SM00267	diguanylate cyclase
F11_RS08500	SM00448	cheY-homologous receiver domain
F11_RS08505	SM00448	cheY-homologous receiver domain
F11_RS08530	SM00052	Putative diguanylate phosphodiesterase
F11_RS08575	SM00411	bacterial (prokaryotic) histone like domain
F11_RS08580	SM00422	helix_turn_helix, mercury resistance
F11_RS08630	SM00091	PAS domain
F11_RS08630	SM00387	Histidine kinase-like ATPases
F11_RS08630	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS08635	SM00382	ATPases associated with a variety of cellular activities
F11_RS08635	SM00448	cheY-homologous receiver domain
F11_RS08640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS08640	SM00387	Histidine kinase-like ATPases
F11_RS08640	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS08645	SM00382	ATPases associated with a variety of cellular activities
F11_RS08645	SM00448	cheY-homologous receiver domain
F11_RS08765	SM00936	Penicillin-binding protein 5, C-terminal domain 
F11_RS08805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS08805	SM00091	PAS domain
F11_RS08805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS08830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F11_RS08870	SM01057	Eukaryotic-type carbonic anhydrase
F11_RS08875	SM00487	DEAD-like helicases superfamily
F11_RS08875	SM00490	helicase superfamily c-terminal domain
F11_RS08875	SM00982	F11_RS08875
F11_RS08875	SM01058	CarD-like/TRCF domain
F11_RS08885	SM00487	DEAD-like helicases superfamily
F11_RS08885	SM00490	helicase superfamily c-terminal domain
F11_RS08895	SM00318	Staphylococcal nuclease homologues
F11_RS08970	SM00434	DNA Topoisomerase IV
F11_RS08990	SM00382	ATPases associated with a variety of cellular activities
F11_RS08995	SM00382	ATPases associated with a variety of cellular activities
F11_RS09010	SM00382	ATPases associated with a variety of cellular activities
F11_RS09075	SM01323	F11_RS09075
F11_RS09085	SM00257	Lysin motif
F11_RS09145	SM00836	DALR anticodon binding domain
F11_RS09145	SM01016	Arginyl tRNA synthetase N terminal dom
F11_RS09150	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
F11_RS09185	SM00100	Cyclic nucleotide-monophosphate binding domain
F11_RS09185	SM00419	helix_turn_helix, cAMP Regulatory protein
F11_RS09190	SM00448	cheY-homologous receiver domain
F11_RS09210	SM00382	ATPases associated with a variety of cellular activities
F11_RS09270	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS09280	SM00881	CoA binding domain
F11_RS09285	SM00052	Putative diguanylate phosphodiesterase
F11_RS09285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS09285	SM00091	PAS domain
F11_RS09285	SM00267	diguanylate cyclase
F11_RS09345	SM00028	Tetratricopeptide repeats
F11_RS09445	SM01004	Delta-aminolevulinic acid dehydratase
F11_RS09465	SM00903	Flavin reductase like domain
F11_RS09495	SM00460	Transglutaminase/protease-like homologues
F11_RS09500	SM00434	DNA Topoisomerase IV
F11_RS09520	SM00358	Double-stranded RNA binding motif
F11_RS09520	SM00535	Ribonuclease III family
F11_RS09540	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
F11_RS09540	SM00954	Region found in RelA / SpoT proteins
F11_RS09545	SM01409	F11_RS09545
F11_RS09560	SM00986	Uracil DNA glycosylase superfamily
F11_RS09560	SM00987	UreE urease accessory protein, C-terminal domain 
F11_RS09585	SM01130	F11_RS09585
F11_RS09635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS09635	SM00091	PAS domain
F11_RS09635	SM00387	Histidine kinase-like ATPases
F11_RS09635	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS09645	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS09660	SM00861	Transketolase, pyrimidine binding domain
F11_RS09680	SM00387	Histidine kinase-like ATPases
F11_RS09680	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS09685	SM01192	F11_RS09685
F11_RS09685	SM01193	F11_RS09685
F11_RS09760	SM00344	helix_turn_helix ASNC type
F11_RS09765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS09765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS09765	SM01358	F11_RS09765
F11_RS09785	SM00382	ATPases associated with a variety of cellular activities
F11_RS09800	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS09800	SM00267	diguanylate cyclase
F11_RS09835	SM00357	Cold shock protein domain
F11_RS09840	SM00487	DEAD-like helicases superfamily
F11_RS09840	SM00490	helicase superfamily c-terminal domain
F11_RS09865	SM00382	ATPases associated with a variety of cellular activities
F11_RS09870	SM00382	ATPases associated with a variety of cellular activities
F11_RS09880	SM01259	F11_RS09880
F11_RS09890	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS09905	SM00917	LeuA allosteric (dimerisation) domain
F11_RS09940	SM00421	helix_turn_helix, Lux Regulon
F11_RS09970	SM00878	Biotin carboxylase C-terminal domain
F11_RS10020	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS10055	SM01240	F11_RS10055
F11_RS10080	SM00998	Adenylosuccinate lyase C-terminus
F11_RS10085	SM00788	Adenylosuccinate synthetase
F11_RS10130	SM00354	helix_turn _helix lactose operon repressor
F11_RS10140	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS10235	SM00422	helix_turn_helix, mercury resistance
F11_RS10240	SM00116	Domain in cystathionine beta-synthase and other proteins.
F11_RS10240	SM00924	MgtE intracellular N domain
F11_RS10285	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS10325	SM00382	ATPases associated with a variety of cellular activities
F11_RS10345	SM00271	DnaJ molecular chaperone homology domain
F11_RS10370	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS10390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS10390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS10440	SM00091	PAS domain
F11_RS10440	SM00387	Histidine kinase-like ATPases
F11_RS10440	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS10440	SM00448	cheY-homologous receiver domain
F11_RS10475	SM00937	F11_RS10475
F11_RS10485	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS10515	SM00382	ATPases associated with a variety of cellular activities
F11_RS10555	SM00947	Carbonic anhydrase
F11_RS10565	SM00387	Histidine kinase-like ATPases
F11_RS10565	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS10570	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
F11_RS10590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS10590	SM00895	F11_RS10590
F11_RS10605	SM01130	F11_RS10605
F11_RS10615	SM00851	MGS-like domain
F11_RS10640	SM00341	Helicase and RNase D C-terminal
F11_RS10640	SM00474	3'-5' exonuclease
F11_RS10650	SM00881	CoA binding domain
F11_RS10655	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS10655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS10660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS10660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS10665	SM01230	F11_RS10665
F11_RS10700	SM00938	Nitrogen regulatory protein P-II
F11_RS10705	SM01230	F11_RS10705
F11_RS10710	SM00062	Bacterial periplasmic substrate-binding proteins
F11_RS10725	SM00382	ATPases associated with a variety of cellular activities
F11_RS10755	SM00843	F11_RS10755
F11_RS10790	SM00382	ATPases associated with a variety of cellular activities
F11_RS10810	SM00387	Histidine kinase-like ATPases
F11_RS10810	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS10810	SM00448	cheY-homologous receiver domain
F11_RS10815	SM00382	ATPases associated with a variety of cellular activities
F11_RS10815	SM01086	C-terminal, D2-small domain, of ClpB protein
F11_RS10850	SM00984	UDP binding domain
F11_RS10865	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
F11_RS10870	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
F11_RS10900	SM00822	F11_RS10900
F11_RS10905	SM00850	LytTr DNA-binding domain
F11_RS10985	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS11000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS11020	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS11030	SM00646	F11_RS11030
F11_RS11035	SM00316	Ribosomal protein S1-like RNA-binding domain
F11_RS11085	SM00382	ATPases associated with a variety of cellular activities
F11_RS11085	SM00448	cheY-homologous receiver domain
F11_RS11105	SM00855	Phosphoglycerate mutase family
F11_RS11140	SM00562	F11_RS11140
F11_RS11145	SM00382	ATPases associated with a variety of cellular activities
F11_RS11165	SM00382	ATPases associated with a variety of cellular activities
F11_RS11170	SM00382	ATPases associated with a variety of cellular activities
F11_RS11190	SM00421	helix_turn_helix, Lux Regulon
F11_RS11210	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
F11_RS11210	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
F11_RS11295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F11_RS11300	SM00244	prohibitin homologues
F11_RS11305	SM00244	prohibitin homologues
F11_RS11340	SM00855	Phosphoglycerate mutase family
F11_RS11355	SM00028	Tetratricopeptide repeats
F11_RS11385	SM00905	Dihydroneopterin aldolase
F11_RS11390	SM00278	Helix-hairpin-helix DNA-binding motif class 1
F11_RS11390	SM00465	GIY-YIG type nucleases (URI domain)
F11_RS11400	SM00852	Probable molybdopterin binding domain
F11_RS11410	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS11415	SM00448	cheY-homologous receiver domain
F11_RS11415	SM00862	Transcriptional regulatory protein, C terminal
F11_RS11420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS11420	SM00387	Histidine kinase-like ATPases
F11_RS11420	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS11430	SM00267	diguanylate cyclase
F11_RS11430	SM00448	cheY-homologous receiver domain
F11_RS11435	SM00448	cheY-homologous receiver domain
F11_RS11450	SM00421	helix_turn_helix, Lux Regulon
F11_RS11450	SM00448	cheY-homologous receiver domain
F11_RS11460	SM00448	cheY-homologous receiver domain
F11_RS11465	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
F11_RS11465	SM00387	Histidine kinase-like ATPases
F11_RS11540	SM00382	ATPases associated with a variety of cellular activities
F11_RS11545	SM00062	Bacterial periplasmic substrate-binding proteins
F11_RS11605	SM00831	Cation transporter/ATPase, N-terminus
F11_RS11620	SM00893	Electron transfer flavoprotein domain
F11_RS11625	SM00893	Electron transfer flavoprotein domain
F11_RS11655	SM00382	ATPases associated with a variety of cellular activities
F11_RS11660	SM00382	ATPases associated with a variety of cellular activities
F11_RS11745	SM00477	DNA/RNA non-specific endonuclease
F11_RS11745	SM00892	DNA/RNA non-specific endonuclease
F11_RS11760	SM00642	Alpha-amylase domain
F11_RS11765	SM00642	Alpha-amylase domain
F11_RS11795	SM00382	ATPases associated with a variety of cellular activities
F11_RS11805	SM01133	F11_RS11805
F11_RS11810	SM00420	helix_turn_helix, Deoxyribose operon repressor
F11_RS11810	SM01134	F11_RS11810
F11_RS11830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F11_RS11845	SM00346	helix_turn_helix isocitrate lyase regulation
F11_RS11870	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS11875	SM00878	Biotin carboxylase C-terminal domain
F11_RS11895	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS11900	SM00260	Two component signalling adaptor domain
F11_RS11905	SM00448	cheY-homologous receiver domain
F11_RS11910	SM00567	E-Z type HEAT repeats
F11_RS11915	SM00138	Methyltransferase, chemotaxis proteins 
F11_RS11920	SM00448	cheY-homologous receiver domain
F11_RS11925	SM00073	Histidine Phosphotransfer domain
F11_RS11925	SM00260	Two component signalling adaptor domain
F11_RS11925	SM00387	Histidine kinase-like ATPases
F11_RS11925	SM01231	F11_RS11925
F11_RS11940	SM00448	cheY-homologous receiver domain
F11_RS11950	SM00448	cheY-homologous receiver domain
F11_RS11955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS11965	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS11980	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS11985	SM00382	ATPases associated with a variety of cellular activities
F11_RS11990	SM00382	ATPases associated with a variety of cellular activities
F11_RS12035	SM00028	Tetratricopeptide repeats
F11_RS12085	SM00028	Tetratricopeptide repeats
F11_RS12090	SM00880	F11_RS12090
F11_RS12090	SM01118	F11_RS12090
F11_RS12115	SM00382	ATPases associated with a variety of cellular activities
F11_RS12120	SM00382	ATPases associated with a variety of cellular activities
F11_RS12125	SM00073	Histidine Phosphotransfer domain
F11_RS12125	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS12125	SM00091	PAS domain
F11_RS12125	SM00387	Histidine kinase-like ATPases
F11_RS12125	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS12125	SM00448	cheY-homologous receiver domain
F11_RS12125	SM01079	F11_RS12125
F11_RS12140	SM00992	Hemimethylated DNA-binding protein YccV like
F11_RS12145	SM00487	DEAD-like helicases superfamily
F11_RS12145	SM00490	helicase superfamily c-terminal domain
F11_RS12145	SM00847	Helicase associated domain (HA2)  Add an annotation
F11_RS12150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS12150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS12150	SM01049	F11_RS12150
F11_RS12155	SM00448	cheY-homologous receiver domain
F11_RS12190	SM00965	Secretin and TonB N terminus short domain
F11_RS12235	SM00382	ATPases associated with a variety of cellular activities
F11_RS12265	SM00382	ATPases associated with a variety of cellular activities
F11_RS12295	SM00965	Secretin and TonB N terminus short domain
F11_RS12310	SM00890	Domain of unknown function
F11_RS12345	SM00861	Transketolase, pyrimidine binding domain
F11_RS12350	SM00052	Putative diguanylate phosphodiesterase
F11_RS12350	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS12350	SM00091	PAS domain
F11_RS12350	SM00267	diguanylate cyclase
F11_RS12350	SM00387	Histidine kinase-like ATPases
F11_RS12350	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS12350	SM00448	cheY-homologous receiver domain
F11_RS12415	SM00382	ATPases associated with a variety of cellular activities
F11_RS12425	SM00859	Semialdehyde dehydrogenase, NAD binding domain
F11_RS12445	SM00028	Tetratricopeptide repeats
F11_RS12470	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS12495	SM00878	Biotin carboxylase C-terminal domain
F11_RS12530	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS12550	SM00382	ATPases associated with a variety of cellular activities
F11_RS12575	SM00267	diguanylate cyclase
F11_RS12620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS12620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS12620	SM01049	F11_RS12620
F11_RS12660	SM00899	F11_RS12660
F11_RS12665	SM00899	F11_RS12665
F11_RS12685	SM00091	PAS domain
F11_RS12685	SM00387	Histidine kinase-like ATPases
F11_RS12695	SM00382	ATPases associated with a variety of cellular activities
F11_RS12740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS12740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS12765	SM01060	F11_RS12765
F11_RS12770	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS12810	SM00382	ATPases associated with a variety of cellular activities
F11_RS12825	SM00450	Rhodanese Homology Domain
F11_RS12845	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS12850	SM00448	cheY-homologous receiver domain
F11_RS12870	SM01133	F11_RS12870
F11_RS12880	SM00267	diguanylate cyclase
F11_RS12900	SM00062	Bacterial periplasmic substrate-binding proteins
F11_RS12905	SM00387	Histidine kinase-like ATPases
F11_RS13035	SM00382	ATPases associated with a variety of cellular activities
F11_RS13040	SM01248	F11_RS13040
F11_RS13045	SM00091	PAS domain
F11_RS13045	SM00911	HWE histidine kinase
F11_RS13055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS13055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS13100	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS13100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS13100	SM01358	F11_RS13100
F11_RS13105	SM00267	diguanylate cyclase
F11_RS13110	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
F11_RS13120	SM00460	Transglutaminase/protease-like homologues
F11_RS13130	SM00460	Transglutaminase/protease-like homologues
F11_RS13140	SM00260	Two component signalling adaptor domain
F11_RS13165	SM00267	diguanylate cyclase
F11_RS13190	SM00382	ATPases associated with a variety of cellular activities
F11_RS13210	SM00642	Alpha-amylase domain
F11_RS13215	SM00642	Alpha-amylase domain
F11_RS13300	SM00267	diguanylate cyclase
F11_RS13305	SM00267	diguanylate cyclase
F11_RS13345	SM00052	Putative diguanylate phosphodiesterase
F11_RS13345	SM00267	diguanylate cyclase
F11_RS13345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS13350	SM00421	helix_turn_helix, Lux Regulon
F11_RS13350	SM00448	cheY-homologous receiver domain
F11_RS13355	SM00052	Putative diguanylate phosphodiesterase
F11_RS13355	SM00267	diguanylate cyclase
F11_RS13365	SM00387	Histidine kinase-like ATPases
F11_RS13365	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS13410	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS13415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
F11_RS13435	SM00861	Transketolase, pyrimidine binding domain
F11_RS13470	SM00271	DnaJ molecular chaperone homology domain
F11_RS13485	SM00849	Metallo-beta-lactamase superfamily
F11_RS13495	SM00903	Flavin reductase like domain
F11_RS13505	SM00382	ATPases associated with a variety of cellular activities
F11_RS13515	SM00100	Cyclic nucleotide-monophosphate binding domain
F11_RS13515	SM00419	helix_turn_helix, cAMP Regulatory protein
F11_RS13520	SM00100	Cyclic nucleotide-monophosphate binding domain
F11_RS13635	SM00363	S4 RNA-binding domain
F11_RS13640	SM00382	ATPases associated with a variety of cellular activities
F11_RS13645	SM00267	diguanylate cyclase
F11_RS13645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS13650	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F11_RS13660	SM00662	RNA polymerases D
F11_RS13725	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
F11_RS13730	SM01374	F11_RS13730
F11_RS13750	SM00322	K homology RNA-binding domain
F11_RS13765	SM01382	F11_RS13765
F11_RS13765	SM01383	F11_RS13765
F11_RS13785	SM01403	F11_RS13785
F11_RS13795	SM00838	Elongation factor G C-terminus
F11_RS13795	SM00889	Elongation factor G, domain IV
F11_RS13810	SM00663	RNA polymerase I subunit A N-terminus
F11_RS13835	SM00649	Ribosomal protein L11/L12
F11_RS13840	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
F11_RS13840	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
F11_RS13870	SM00967	RNA 2'-O ribose methyltransferase substrate binding
F11_RS13910	SM00387	Histidine kinase-like ATPases
F11_RS13910	SM00433	TopoisomeraseII
F11_RS13950	SM00487	DEAD-like helicases superfamily
F11_RS13950	SM00490	helicase superfamily c-terminal domain
F11_RS13985	SM00091	PAS domain
F11_RS13985	SM00387	Histidine kinase-like ATPases
F11_RS13985	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS13985	SM00448	cheY-homologous receiver domain
F11_RS13990	SM00448	cheY-homologous receiver domain
F11_RS14095	SM00822	F11_RS14095
F11_RS14100	SM00382	ATPases associated with a variety of cellular activities
F11_RS14120	SM00387	Histidine kinase-like ATPases
F11_RS14125	SM00460	Transglutaminase/protease-like homologues
F11_RS14130	SM00357	Cold shock protein domain
F11_RS14145	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS14145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS14150	SM00448	cheY-homologous receiver domain
F11_RS14180	SM00052	Putative diguanylate phosphodiesterase
F11_RS14180	SM00091	PAS domain
F11_RS14180	SM00267	diguanylate cyclase
F11_RS14210	SM00226	Low molecular weight phosphatase family
F11_RS14235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS14235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS14260	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS14290	SM00382	ATPases associated with a variety of cellular activities
F11_RS14315	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS14385	SM00382	ATPases associated with a variety of cellular activities
F11_RS14420	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS14455	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
F11_RS14460	SM00382	ATPases associated with a variety of cellular activities
F11_RS14465	SM00091	PAS domain
F11_RS14465	SM00387	Histidine kinase-like ATPases
F11_RS14465	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS14465	SM00448	cheY-homologous receiver domain
F11_RS14550	SM00448	cheY-homologous receiver domain
F11_RS14585	SM00858	F11_RS14585
F11_RS14635	SM00028	Tetratricopeptide repeats
F11_RS14640	SM00028	Tetratricopeptide repeats
F11_RS14660	SM00028	Tetratricopeptide repeats
F11_RS14685	SM00054	EF-hand, calcium binding motif
F11_RS14705	SM00267	diguanylate cyclase
F11_RS14715	SM01091	Transporter associated domain
F11_RS14785	SM00400	zinc finger
F11_RS14785	SM00493	F11_RS14785
F11_RS14795	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
F11_RS14800	SM00851	MGS-like domain
F11_RS14800	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
F11_RS14825	SM00953	F11_RS14825
F11_RS14840	SM00382	ATPases associated with a variety of cellular activities
F11_RS14850	SM00344	helix_turn_helix ASNC type
F11_RS14905	SM00344	helix_turn_helix ASNC type
F11_RS14920	SM00382	ATPases associated with a variety of cellular activities
F11_RS14940	SM00448	cheY-homologous receiver domain
F11_RS14940	SM00862	Transcriptional regulatory protein, C terminal
F11_RS14945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS14945	SM00387	Histidine kinase-like ATPases
F11_RS14945	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS14975	SM00028	Tetratricopeptide repeats
F11_RS14980	SM00028	Tetratricopeptide repeats
F11_RS15020	SM00448	cheY-homologous receiver domain
F11_RS15020	SM00862	Transcriptional regulatory protein, C terminal
F11_RS15025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS15025	SM00387	Histidine kinase-like ATPases
F11_RS15025	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS15060	SM00052	Putative diguanylate phosphodiesterase
F11_RS15065	SM00091	PAS domain
F11_RS15065	SM00387	Histidine kinase-like ATPases
F11_RS15065	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS15065	SM00448	cheY-homologous receiver domain
F11_RS15100	SM00382	ATPases associated with a variety of cellular activities
F11_RS15110	SM00382	ATPases associated with a variety of cellular activities
F11_RS15120	SM00853	MutL C terminal dimerisation domain
F11_RS15120	SM01340	F11_RS15120
F11_RS15195	SM00829	Enoylreductase
F11_RS15210	SM00904	Riboflavin kinase
F11_RS15230	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
F11_RS15400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS15400	SM00895	F11_RS15400
F11_RS15435	SM00420	helix_turn_helix, Deoxyribose operon repressor
F11_RS15435	SM01134	F11_RS15435
F11_RS15455	SM00382	ATPases associated with a variety of cellular activities
F11_RS15470	SM00822	F11_RS15470
F11_RS15505	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
F11_RS15570	SM00491	F11_RS15570
F11_RS15575	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS15575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS15585	SM00387	Histidine kinase-like ATPases
F11_RS15585	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS15585	SM00448	cheY-homologous receiver domain
F11_RS15595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS15620	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS15705	SM00829	Enoylreductase
F11_RS15715	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS15730	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS15740	SM00344	helix_turn_helix ASNC type
F11_RS15775	SM00893	Electron transfer flavoprotein domain
F11_RS15780	SM00893	Electron transfer flavoprotein domain
F11_RS15815	SM00564	beta-propeller repeat
F11_RS15855	SM00710	Parallel beta-helix repeats
F11_RS15880	SM00028	Tetratricopeptide repeats
F11_RS15910	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
F11_RS15910	SM00387	Histidine kinase-like ATPases
F11_RS15915	SM00382	ATPases associated with a variety of cellular activities
F11_RS15915	SM00448	cheY-homologous receiver domain
F11_RS15940	SM00823	Phosphopantetheine attachment site
F11_RS15940	SM00824	Thioesterase
F11_RS15945	SM00100	Cyclic nucleotide-monophosphate binding domain
F11_RS15970	SM00382	ATPases associated with a variety of cellular activities
F11_RS16035	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS16045	SM00382	ATPases associated with a variety of cellular activities
F11_RS16055	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
F11_RS16055	SM00267	diguanylate cyclase
F11_RS16080	SM00052	Putative diguanylate phosphodiesterase
F11_RS16080	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS16080	SM00091	PAS domain
F11_RS16080	SM00267	diguanylate cyclase
F11_RS16090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS16090	SM00895	F11_RS16090
F11_RS16110	SM01007	Class II Aldolase and Adducin N-terminal domain
F11_RS16150	SM00382	ATPases associated with a variety of cellular activities
F11_RS16180	SM00327	von Willebrand factor (vWF) type A domain
F11_RS16245	SM00382	ATPases associated with a variety of cellular activities
F11_RS16275	SM00845	GatB domain
F11_RS16290	SM00732	Likely ribonuclease with RNase H fold.
F11_RS16300	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
F11_RS16335	SM00448	cheY-homologous receiver domain
F11_RS16335	SM00862	Transcriptional regulatory protein, C terminal
F11_RS16340	SM00387	Histidine kinase-like ATPases
F11_RS16360	SM01207	F11_RS16360
F11_RS16405	SM00382	ATPases associated with a variety of cellular activities
F11_RS16410	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
F11_RS16410	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
F11_RS16410	SM00493	F11_RS16410
F11_RS16415	SM00316	Ribosomal protein S1-like RNA-binding domain
F11_RS16415	SM00955	F11_RS16415
F11_RS16420	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
F11_RS16420	SM00245	tail specific protease
F11_RS16430	SM00448	cheY-homologous receiver domain
F11_RS16465	SM00091	PAS domain
F11_RS16465	SM00387	Histidine kinase-like ATPases
F11_RS16465	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS16515	SM00382	ATPases associated with a variety of cellular activities
F11_RS16520	SM00953	F11_RS16520
F11_RS16550	SM00421	helix_turn_helix, Lux Regulon
F11_RS16550	SM00448	cheY-homologous receiver domain
F11_RS16555	SM00052	Putative diguanylate phosphodiesterase
F11_RS16555	SM00267	diguanylate cyclase
F11_RS16585	SM00382	ATPases associated with a variety of cellular activities
F11_RS16595	SM00834	Putative regulatory protein
F11_RS16610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS16615	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS16645	SM00968	SMC proteins Flexible Hinge Domain
F11_RS16660	SM00478	endonuclease III
F11_RS16675	SM00382	ATPases associated with a variety of cellular activities
F11_RS16690	SM00563	Phosphate acyltransferases
F11_RS16730	SM00830	Chorismate mutase type II
F11_RS16755	SM00849	Metallo-beta-lactamase superfamily
F11_RS16830	SM00448	cheY-homologous receiver domain
F11_RS16845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS16845	SM00387	Histidine kinase-like ATPases
F11_RS16875	SM01248	F11_RS16875
F11_RS16885	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS16885	SM00091	PAS domain
F11_RS16885	SM00387	Histidine kinase-like ATPases
F11_RS16885	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS16900	SM01217	F11_RS16900
F11_RS16905	SM00382	ATPases associated with a variety of cellular activities
F11_RS16925	SM00382	ATPases associated with a variety of cellular activities
F11_RS16930	SM00382	ATPases associated with a variety of cellular activities
F11_RS16970	SM01126	F11_RS16970
F11_RS16985	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS16990	SM00857	Resolvase, N terminal domain
F11_RS17050	SM00100	Cyclic nucleotide-monophosphate binding domain
F11_RS17050	SM00419	helix_turn_helix, cAMP Regulatory protein
F11_RS17120	SM00387	Histidine kinase-like ATPases
F11_RS17135	SM01234	F11_RS17135
F11_RS17155	SM01130	F11_RS17155
F11_RS17165	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS17195	SM00871	Bacterial transcription activator, effector binding domain
F11_RS17235	SM00342	helix_turn_helix, arabinose operon control protein
F11_RS17235	SM00478	endonuclease III
F11_RS17235	SM01009	AlkA N-terminal domain
F11_RS17265	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS17265	SM00091	PAS domain
F11_RS17265	SM00387	Histidine kinase-like ATPases
F11_RS17265	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS17275	SM00838	Elongation factor G C-terminus
F11_RS17305	SM00829	Enoylreductase
F11_RS17320	SM00091	PAS domain
F11_RS17320	SM00267	diguanylate cyclase
F11_RS17345	SM00028	Tetratricopeptide repeats
F11_RS17405	SM00267	diguanylate cyclase
F11_RS17425	SM00421	helix_turn_helix, Lux Regulon
F11_RS17440	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS17465	SM00382	ATPases associated with a variety of cellular activities
F11_RS17475	SM00829	Enoylreductase
F11_RS17505	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS17515	SM00382	ATPases associated with a variety of cellular activities
F11_RS17520	SM00382	ATPases associated with a variety of cellular activities
F11_RS17560	SM00448	cheY-homologous receiver domain
F11_RS17560	SM00862	Transcriptional regulatory protein, C terminal
F11_RS17565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS17565	SM00387	Histidine kinase-like ATPases
F11_RS17565	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS17570	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
F11_RS17665	SM00387	Histidine kinase-like ATPases
F11_RS17665	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS17670	SM00996	S-adenosyl-L-homocysteine hydrolase
F11_RS17670	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
F11_RS17715	SM00382	ATPases associated with a variety of cellular activities
F11_RS17750	SM00100	Cyclic nucleotide-monophosphate binding domain
F11_RS17760	SM00357	Cold shock protein domain
F11_RS17775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS17790	SM00344	helix_turn_helix ASNC type
F11_RS17815	SM00382	ATPases associated with a variety of cellular activities
F11_RS17840	SM00267	diguanylate cyclase
F11_RS17860	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS17885	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
F11_RS17910	SM00387	Histidine kinase-like ATPases
F11_RS17910	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS17910	SM00448	cheY-homologous receiver domain
F11_RS17920	SM00052	Putative diguanylate phosphodiesterase
F11_RS17920	SM00448	cheY-homologous receiver domain
F11_RS17935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS17935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS17980	SM00382	ATPases associated with a variety of cellular activities
F11_RS18005	SM00382	ATPases associated with a variety of cellular activities
F11_RS18020	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS18020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS18025	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
F11_RS18025	SM00474	3'-5' exonuclease
F11_RS18025	SM00475	5'-3' exonuclease
F11_RS18025	SM00482	DNA polymerase A domain
F11_RS18030	SM00850	LytTr DNA-binding domain
F11_RS18050	SM00347	helix_turn_helix multiple antibiotic resistance protein
F11_RS18075	SM00873	B3/4 domain
F11_RS18075	SM00874	tRNA synthetase B5 domain
F11_RS18075	SM00896	Ferredoxin-fold anticodon binding domain
F11_RS18085	SM01152	F11_RS18085
F11_RS18115	SM00932	Scaffold protein Nfu/NifU N terminal
F11_RS18155	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
F11_RS18165	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
F11_RS18165	SM00534	ATPase domain of DNA mismatch repair MUTS family
F11_RS18170	SM00919	Malic enzyme, NAD binding domain
F11_RS18170	SM01274	F11_RS18170
F11_RS18175	SM00387	Histidine kinase-like ATPases
F11_RS18175	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS18200	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS18230	SM00271	DnaJ molecular chaperone homology domain
F11_RS18260	SM00052	Putative diguanylate phosphodiesterase
F11_RS18260	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS18260	SM00091	PAS domain
F11_RS18260	SM00267	diguanylate cyclase
F11_RS18265	SM00382	ATPases associated with a variety of cellular activities
F11_RS18275	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS18275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS18410	SM00382	ATPases associated with a variety of cellular activities
F11_RS18455	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS18465	SM00382	ATPases associated with a variety of cellular activities
F11_RS18465	SM01086	C-terminal, D2-small domain, of ClpB protein
F11_RS18470	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS18475	SM00463	Small MutS-related domain
F11_RS18500	SM00925	MltA specific insert domain
F11_RS18505	SM00978	F11_RS18505
F11_RS18520	SM00479	F11_RS18520
F11_RS18560	SM00357	Cold shock protein domain
F11_RS18560	SM00382	ATPases associated with a variety of cellular activities
F11_RS18560	SM00959	Rho termination factor, N-terminal domain
F11_RS18565	SM00829	Enoylreductase
F11_RS18590	SM01228	F11_RS18590
F11_RS18605	SM00470	ParB-like nuclease domain
F11_RS18655	SM00448	cheY-homologous receiver domain
F11_RS18655	SM00862	Transcriptional regulatory protein, C terminal
F11_RS18660	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS18685	SM00986	Uracil DNA glycosylase superfamily
F11_RS18685	SM00987	UreE urease accessory protein, C-terminal domain 
F11_RS18695	SM00226	Low molecular weight phosphatase family
F11_RS18720	SM00382	ATPases associated with a variety of cellular activities
F11_RS18740	SM00798	AICARFT/IMPCHase bienzyme
F11_RS18740	SM00851	MGS-like domain
F11_RS18785	SM00382	ATPases associated with a variety of cellular activities
F11_RS18790	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
F11_RS18790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
F11_RS18870	SM00867	YceI-like domain 
F11_RS18880	SM00867	YceI-like domain 
F11_RS18885	SM00028	Tetratricopeptide repeats
F11_RS18890	SM00344	helix_turn_helix ASNC type
F11_RS18895	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
F11_RS18895	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
F11_RS18905	SM00382	ATPases associated with a variety of cellular activities
F11_RS18975	SM00382	ATPases associated with a variety of cellular activities
F11_RS18990	SM00382	ATPases associated with a variety of cellular activities
F11_RS18990	SM00843	F11_RS18990
F11_RS19015	SM00464	Found in ATP-dependent protease La (LON)
F11_RS19090	SM00382	ATPases associated with a variety of cellular activities
F11_RS19095	SM00382	ATPases associated with a variety of cellular activities
F11_RS19125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS19125	SM00895	F11_RS19125
F11_RS19135	SM00507	HNH nucleases
F11_RS19150	SM00953	F11_RS19150
F11_RS19190	SM00116	Domain in cystathionine beta-synthase and other proteins.
F11_RS19250	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS19250	SM00387	Histidine kinase-like ATPases
F11_RS19250	SM00388	His Kinase A (phosphoacceptor) domain
F11_RS19250	SM00448	cheY-homologous receiver domain
F11_RS19270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
F11_RS19315	SM00563	Phosphate acyltransferases
F11_RS19320	SM00729	Elongator protein 3, MiaB family, Radical SAM
F11_RS19335	SM01091	Transporter associated domain
F11_RS19345	SM00530	Helix-turn-helix XRE-family like proteins 
F11_RS19365	SM00316	Ribosomal protein S1-like RNA-binding domain
F11_RS19365	SM00322	K homology RNA-binding domain
F11_RS19390	SM01387	F11_RS19390
F11_RS19395	SM00316	Ribosomal protein S1-like RNA-binding domain
F11_RS19395	SM00322	K homology RNA-binding domain
F11_RS19415	SM00287	Bacterial SH3 domain homologues
F11_RS19465	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
F11_RS19465	SM01232	F11_RS19465
F11_RS19535	SM00052	Putative diguanylate phosphodiesterase
F11_RS19535	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
F11_RS19535	SM00091	PAS domain
F11_RS19535	SM00267	diguanylate cyclase
