locus-tag	class	description
RAF_RS00025	COG0543	2 iron, 2 sulfur cluster binding
RAF_RS00025	COG0493	'glutamate synthase
RAF_RS00080	COG0803	Belongs to the bacterial solute-binding protein 9 family
RAF_RS00085	COG0617	tRNA 3'-terminal CCA addition
RAF_RS00145	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
RAF_RS00160	COG5336	function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex
RAF_RS00175	COG4797	methyltransferase
RAF_RS00175	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RAF_RS00185	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
RAF_RS00190	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RAF_RS00190	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RAF_RS00195	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RAF_RS00200	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RAF_RS00200	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RAF_RS00385	COG0668	transmembrane transport
RAF_RS00435	COG2271	Major facilitator Superfamily
RAF_RS00465	COG0488	(ABC) transporter
RAF_RS00485	COG0316	Belongs to the HesB IscA family
RAF_RS00530	COG0745	RESPONSE REGULATOR receiver
RAF_RS00560	COG0477	Major facilitator Superfamily
RAF_RS00620	COG2121	Domain of unknown function (DUF374)
RAF_RS00630	COG0500	methyltransferase
RAF_RS00650	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
RAF_RS00665	COG1127	ABC transporter
RAF_RS00725	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
RAF_RS00735	COG3451	type IV secretory pathway VirB4
RAF_RS00825	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
RAF_RS00840	COG3660	Nucleoside-diphosphate-sugar epimerase
RAF_RS00850	COG0330	HflC and HflK could
RAF_RS00855	COG0330	HflC and HflK could
RAF_RS00910	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
RAF_RS00950	COG0567	Dehydrogenase, E1 component
RAF_RS00980	COG0670	Belongs to the BI1 family
RAF_RS00995	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAF_RS01055	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RAF_RS01085	COG2867	negative regulation of translational initiation
RAF_RS01100	COG2155	Conserved Protein
RAF_RS01105	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAF_RS01115	COG0470	DNA polymerase III
RAF_RS01125	COG1505	serine-type exopeptidase activity
RAF_RS01135	COG1505	serine-type exopeptidase activity
RAF_RS01140	COG1505	serine-type exopeptidase activity
RAF_RS01145	COG1505	serine-type exopeptidase activity
RAF_RS01150	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RAF_RS01155	COG0666	response to abiotic stimulus
RAF_RS01160	COG0666	response to abiotic stimulus
RAF_RS01180	COG1301	dicarboxylic acid transport
RAF_RS01205	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
RAF_RS01215	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RAF_RS01235	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RAF_RS01250	COG5468	Lipopolysaccharide-assembly
RAF_RS01255	COG1466	dna polymerase III delta subunit
RAF_RS01270	COG3838	Conjugal transfer protein Trbc
RAF_RS01295	COG4953	penicillin-binding protein 1C
RAF_RS01340	COG0589	response to stress
RAF_RS01485	COG1132	(ABC) transporter
RAF_RS01495	COG1271	oxidase subunit
RAF_RS01500	COG1294	oxidase, subunit
RAF_RS01555	COG1132	(ABC) transporter
RAF_RS01585	COG1538	Outer membrane efflux protein
RAF_RS01590	COG3827	peptidoglycan binding
RAF_RS01600	COG0666	response to abiotic stimulus
RAF_RS01610	COG0793	Belongs to the peptidase S41A family
RAF_RS01685	COG0483	inositol monophosphate 1-phosphatase activity
RAF_RS01700	COG1183	phosphatidylcholine synthase activity
RAF_RS01740	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
RAF_RS01750	COG1585	Membrane protein implicated in regulation of membrane protease activity
RAF_RS01775	COG1530	ribonuclease E activity
RAF_RS01790	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
RAF_RS01795	COG0708	Exodeoxyribonuclease III
RAF_RS01955	COG0772	Belongs to the SEDS family
RAF_RS01970	COG1487	ribonuclease activity
RAF_RS01985	COG2111	Na H antiporter
RAF_RS01985	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RAF_RS01990	COG0651	ATP synthesis coupled electron transport
RAF_RS01995	COG1006	Multisubunit Na H antiporter MnhC subunit
RAF_RS02015	COG3736	Type IV secretory pathway, component VirB8
RAF_RS02020	COG3504	Conjugal transfer protein
RAF_RS02080	COG0546	phosphoglycolate phosphatase activity
RAF_RS02105	COG1451	nucleotide metabolic process
RAF_RS02140	COG0531	amino acid
RAF_RS02150	COG0488	(ABC) transporter
RAF_RS02190	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RAF_RS02195	COG0477	Major facilitator Superfamily
RAF_RS02215	COG0537	adenosine 5'-monophosphoramidase activity
RAF_RS02245	COG0606	chelatase, subunit chli
RAF_RS02270	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
RAF_RS02300	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
RAF_RS02305	COG0758	DNA mediated transformation
RAF_RS02310	COG0758	DNA mediated transformation
RAF_RS02310	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
RAF_RS02315	COG0450	alkyl hydroperoxide reductase
RAF_RS02395	COG0438	transferase activity, transferring glycosyl groups
RAF_RS02500	COG4765	Protein conserved in bacteria
RAF_RS02555	COG2984	ABC transporter substrate binding protein
RAF_RS02560	COG4120	Belongs to the binding-protein-dependent transport system permease family
RAF_RS02565	COG1122	ATPase activity
RAF_RS02600	COG0281	malic enzyme
RAF_RS02600	COG0280	phosphate acetyltransferase
RAF_RS02620	COG0477	Major facilitator Superfamily
RAF_RS02705	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RAF_RS02720	COG3177	Filamentation induced by cAMP protein fic
RAF_RS02750	COG1132	(ABC) transporter
RAF_RS02760	COG1686	Belongs to the peptidase S11 family
RAF_RS02785	COG4633	Protein conserved in bacteria
RAF_RS02805	COG0616	signal peptide processing
RAF_RS02805	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
RAF_RS02840	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
RAF_RS02865	COG0739	heme binding
RAF_RS02895	COG1519	Transferase
RAF_RS02920	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAF_RS02925	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAF_RS02990	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
RAF_RS03030	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
RAF_RS03050	COG0745	RESPONSE REGULATOR receiver
RAF_RS03110	COG4395	Tim44
RAF_RS03130	COG1238	metal cluster binding
RAF_RS03135	COG1714	RDD family
RAF_RS03165	COG0596	Alpha beta hydrolase
RAF_RS03190	COG1012	belongs to the aldehyde dehydrogenase family
RAF_RS03200	COG0463	Glycosyl transferase, family 2
RAF_RS03220	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
RAF_RS03255	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
RAF_RS03260	COG4451	ribulose bisphosphate carboxylase, small
RAF_RS03260	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
RAF_RS03315	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RAF_RS03335	COG1357	PFAM Pentapeptide repeats (8 copies)
RAF_RS03340	COG1357	PFAM Pentapeptide repeats (8 copies)
RAF_RS03345	COG1357	PFAM Pentapeptide repeats (8 copies)
RAF_RS03360	COG1137	ATPase activity
RAF_RS03365	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
RAF_RS03375	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
RAF_RS03375	COG0517	IMP dehydrogenase activity
RAF_RS03410	COG1295	ribonuclease BN
RAF_RS03440	COG0235	Class ii aldolase
RAF_RS03460	COG4285	Biotin-protein ligase, N terminal
RAF_RS03465	COG1268	BioY protein
RAF_RS03470	COG0285	dihydrofolate synthase activity
RAF_RS03515	COG5346	Predicted membrane protein (DUF2335)
RAF_RS03555	COG0616	signal peptide processing
RAF_RS03605	COG0666	response to abiotic stimulus
RAF_RS03605	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RAF_RS03610	COG0666	response to abiotic stimulus
RAF_RS03610	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RAF_RS03685	COG4804	nuclease activity
RAF_RS03730	COG1104	cysteine desulfurase activity
RAF_RS03740	COG0822	iron-sulfur transferase activity
RAF_RS03745	COG0316	Belongs to the HesB IscA family
RAF_RS03760	COG0531	amino acid
RAF_RS03780	COG0142	geranyltranstransferase activity
RAF_RS03820	COG1279	arginine transmembrane transporter activity
RAF_RS03825	COG1587	Uroporphyrinogen-III synthase
RAF_RS03830	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RAF_RS03835	COG3071	HemY protein
RAF_RS03840	COG2945	thiolester hydrolase activity
RAF_RS03855	COG5622	Protein required for attachment to host cells
RAF_RS03915	COG0354	folic acid binding
RAF_RS03925	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
RAF_RS03935	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
RAF_RS03940	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RAF_RS03945	COG2226	methyltransferase
RAF_RS03990	COG0257	Belongs to the bacterial ribosomal protein bL36 family
RAF_RS04000	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
RAF_RS04070	COG0113	porphobilinogen synthase activity
RAF_RS04075	COG0666	response to abiotic stimulus
RAF_RS04095	COG0163	prenyltransferase activity
RAF_RS04115	COG0814	amino acid
RAF_RS04130	COG0742	ribosomal rna small subunit methyltransferase
RAF_RS04155	COG1214	PFAM Peptidase M22, glycoprotease
RAF_RS04190	COG1959	2 iron, 2 sulfur cluster binding
RAF_RS04315	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RAF_RS04340	COG0768	penicillin binding
RAF_RS04360	COG5462	secreted (periplasmic) protein
RAF_RS04385	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RAF_RS04395	COG2847	Copper chaperone PCu(A)C
RAF_RS04415	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RAF_RS04465	COG0666	response to abiotic stimulus
RAF_RS04510	COG2239	Acts as a magnesium transporter
RAF_RS04580	COG0728	peptidoglycan biosynthetic process
RAF_RS04590	COG1917	Cupin 2, conserved barrel domain protein
RAF_RS04595	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
RAF_RS04720	COG0012	GTP binding
RAF_RS04745	COG0602	queuosine metabolic process
RAF_RS04780	COG0666	response to abiotic stimulus
RAF_RS04790	COG0598	Magnesium transport protein CorA
RAF_RS04865	COG4770	biotin carboxylase activity
RAF_RS04870	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
RAF_RS04890	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RAF_RS04955	COG0628	permease
RAF_RS05065	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
RAF_RS05160	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RAF_RS05200	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
RAF_RS05210	COG0513	Belongs to the DEAD box helicase family
RAF_RS05260	COG0708	Exodeoxyribonuclease III
RAF_RS05340	COG0084	hydrolase, TatD family'
RAF_RS05355	COG0477	Major facilitator Superfamily
RAF_RS05380	COG3475	LICD family
RAF_RS05485	COG2814	Major facilitator Superfamily
RAF_RS05505	COG4536	flavin adenine dinucleotide binding
RAF_RS05510	COG1138	Cytochrome C-type biogenesis protein
RAF_RS05535	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RAF_RS05560	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RAF_RS05575	COG0739	heme binding
RAF_RS05635	COG3761	NADH ubiquinone oxidoreductase 17.2 kD subunit
RAF_RS05670	COG1074	ATP-dependent DNA helicase activity
RAF_RS05680	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RAF_RS05785	COG3202	ADP transmembrane transporter activity
RAF_RS05890	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
RAF_RS05895	COG0683	leucine binding
RAF_RS05905	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
RAF_RS05910	COG0261	This protein binds to 23S rRNA in the presence of protein L20
RAF_RS05920	COG0527	aspartate kinase activity
RAF_RS05955	COG0477	Major facilitator Superfamily
RAF_RS05960	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
RAF_RS05965	COG0495	leucyl-tRNA aminoacylation
RAF_RS05970	COG1426	Protein conserved in bacteria
RAF_RS05975	COG2902	Dehydrogenase
RAF_RS06020	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RAF_RS06025	COG0488	(ABC) transporter
RAF_RS06075	COG2885	chlorophyll binding
RAF_RS06115	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
RAF_RS06155	COG0805	protein transport
RAF_RS06165	COG3451	type IV secretory pathway VirB4
RAF_RS06180	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
RAF_RS06185	COG4797	methyltransferase
RAF_RS06185	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RAF_RS06190	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
RAF_RS06200	COG0839	Belongs to the complex I subunit 6 family
RAF_RS06275	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RAF_RS06280	COG0783	Belongs to the Dps family
RAF_RS06345	COG0799	negative regulation of ribosome biogenesis
RAF_RS06350	COG0271	Belongs to the BolA IbaG family
RAF_RS06465	COG3243	poly(R)-hydroxyalkanoic acid synthase
RAF_RS06470	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
RAF_RS06500	COG0024	Methionine aminopeptidase
RAF_RS06505	COG2003	Belongs to the UPF0758 family
RAF_RS06510	COG2003	Belongs to the UPF0758 family
RAF_RS06515	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RAF_RS06540	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RAF_RS06560	COG1881	PFAM PEBP family protein
RAF_RS06670	COG1573	uracil-dna glycosylase
RAF_RS06705	COG0009	L-threonylcarbamoyladenylate synthase
RAF_RS06730	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
RAF_RS06775	COG0170	dolichyl monophosphate biosynthetic process
RAF_RS06785	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
RAF_RS06790	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
RAF_RS06795	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
RAF_RS06800	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
RAF_RS06810	COG3577	Aspartyl protease
RAF_RS06845	COG3077	Addiction module antitoxin, RelB DinJ family
RAF_RS06850	COG0795	lipopolysaccharide-transporting ATPase activity
RAF_RS06855	COG2927	DNA polymerase III (CHI subunit)
RAF_RS06920	COG3023	N-Acetylmuramoyl-L-alanine amidase
RAF_RS06935	COG0267	Belongs to the bacterial ribosomal protein bL33 family
RAF_RS06945	COG1028	Short-chain dehydrogenase reductase Sdr
RAF_RS06955	COG0477	Major facilitator Superfamily
RAF_RS06975	COG1981	membrane
RAF_RS07015	COG0493	'glutamate synthase